Query psy14440
Match_columns 711
No_of_seqs 913 out of 4000
Neff 8.2
Searched_HMMs 29240
Date Fri Aug 16 19:56:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14440.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14440hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 1.2E-43 4.1E-48 391.0 38.5 279 380-658 101-410 (410)
2 3ow8_A WD repeat-containing pr 100.0 6.7E-43 2.3E-47 372.3 40.6 281 378-658 23-320 (321)
3 1got_B GT-beta; complex (GTP-b 100.0 4.2E-42 1.4E-46 368.6 43.6 279 377-656 45-340 (340)
4 2ynn_A Coatomer subunit beta'; 100.0 4.7E-42 1.6E-46 362.3 43.0 276 380-709 6-288 (304)
5 2pbi_B Guanine nucleotide-bind 100.0 2E-41 6.9E-46 365.8 43.1 280 377-656 54-354 (354)
6 4gqb_B Methylosome protein 50; 100.0 2.6E-41 9E-46 363.9 36.5 272 385-659 28-331 (344)
7 1nr0_A Actin interacting prote 100.0 1E-40 3.5E-45 386.7 42.0 277 380-659 52-397 (611)
8 3iz6_a 40S ribosomal protein R 100.0 2.3E-41 8E-46 368.6 33.9 285 376-660 55-376 (380)
9 1erj_A Transcriptional repress 100.0 4.9E-40 1.7E-44 359.8 41.3 278 380-659 57-389 (393)
10 3fm0_A Protein CIAO1; WDR39,SG 100.0 8.4E-40 2.9E-44 351.6 41.2 290 378-709 6-320 (345)
11 4g56_B MGC81050 protein; prote 100.0 1.7E-40 6E-45 359.0 34.1 275 384-660 39-344 (357)
12 4ery_A WD repeat-containing pr 100.0 3E-39 1E-43 340.7 41.6 281 378-658 14-311 (312)
13 3frx_A Guanine nucleotide-bind 100.0 4.4E-39 1.5E-43 342.1 42.5 278 379-659 9-317 (319)
14 1nr0_A Actin interacting prote 100.0 1.3E-39 4.4E-44 377.5 41.2 305 382-709 142-596 (611)
15 2ymu_A WD-40 repeat protein; u 100.0 6.1E-39 2.1E-43 366.8 45.3 303 378-709 253-565 (577)
16 2nxp_A Transcription initiatio 100.0 2.8E-42 9.7E-47 324.2 13.2 152 123-274 5-156 (156)
17 1vyh_C Platelet-activating fac 100.0 2E-39 6.9E-44 357.2 37.2 267 420-709 110-396 (410)
18 2xzm_R RACK1; ribosome, transl 100.0 1.8E-38 6.1E-43 340.5 43.0 294 378-709 12-325 (343)
19 2hes_X YDR267CP; beta-propelle 100.0 6.5E-39 2.2E-43 342.5 38.5 278 379-659 6-328 (330)
20 1r5m_A SIR4-interacting protei 100.0 7.7E-39 2.6E-43 349.1 37.6 324 380-709 38-410 (425)
21 3ow8_A WD repeat-containing pr 100.0 3.4E-38 1.1E-42 336.0 40.3 257 430-709 48-306 (321)
22 2j49_A Transcription initiatio 100.0 1.4E-41 4.9E-46 314.3 12.2 137 138-275 3-142 (148)
23 2ymu_A WD-40 repeat protein; u 100.0 1.1E-37 3.8E-42 356.4 45.3 303 378-709 212-524 (577)
24 1got_B GT-beta; complex (GTP-b 100.0 3.4E-37 1.2E-41 330.4 42.3 269 417-709 54-328 (340)
25 2j4b_A TAF5, transcription ini 100.0 1.4E-40 4.7E-45 305.2 13.4 134 141-275 4-137 (138)
26 2pm7_B Protein transport prote 100.0 6.4E-38 2.2E-42 329.5 35.6 250 381-659 3-285 (297)
27 3vl1_A 26S proteasome regulato 100.0 7.3E-39 2.5E-43 351.0 29.1 307 389-710 58-407 (420)
28 2pm9_A Protein WEB1, protein t 100.0 8.2E-39 2.8E-43 349.5 26.4 323 388-710 13-401 (416)
29 3zwl_B Eukaryotic translation 100.0 1.2E-36 4.1E-41 325.2 41.8 283 376-660 21-347 (369)
30 4aow_A Guanine nucleotide-bind 100.0 2.2E-36 7.7E-41 320.5 42.8 280 380-661 31-339 (340)
31 1gxr_A ESG1, transducin-like e 100.0 3.1E-36 1.1E-40 318.2 42.9 275 379-657 43-335 (337)
32 1sq9_A Antiviral protein SKI8; 100.0 1.9E-37 6.3E-42 336.9 34.1 278 379-659 8-395 (397)
33 3dm0_A Maltose-binding peripla 100.0 1.8E-36 6E-41 356.2 42.2 278 380-659 375-693 (694)
34 2pbi_B Guanine nucleotide-bind 100.0 3.7E-36 1.2E-40 324.6 41.2 273 414-709 60-342 (354)
35 3k26_A Polycomb protein EED; W 100.0 4.6E-37 1.6E-41 328.5 33.3 275 382-658 13-365 (366)
36 3i2n_A WD repeat-containing pr 100.0 3.2E-37 1.1E-41 328.9 31.7 285 376-661 7-355 (357)
37 3ei3_B DNA damage-binding prot 100.0 1.5E-36 5.1E-41 329.3 36.3 275 379-659 65-382 (383)
38 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.8E-36 6.2E-41 325.5 36.4 250 384-662 58-338 (345)
39 2ynn_A Coatomer subunit beta'; 100.0 4.5E-36 1.5E-40 316.5 38.4 250 378-659 46-302 (304)
40 1gxr_A ESG1, transducin-like e 100.0 4.8E-36 1.6E-40 316.8 37.1 298 385-709 7-322 (337)
41 3odt_A Protein DOA1; ubiquitin 100.0 1E-35 3.5E-40 311.3 38.0 273 378-660 9-297 (313)
42 3f3f_A Nucleoporin SEH1; struc 100.0 6.4E-36 2.2E-40 315.6 36.2 252 382-660 6-338 (351)
43 4ery_A WD repeat-containing pr 100.0 1.4E-35 4.6E-40 312.7 38.0 268 419-709 24-295 (312)
44 3bg1_A Protein SEC13 homolog; 100.0 3.1E-37 1E-41 327.4 25.4 249 381-658 7-292 (316)
45 3jrp_A Fusion protein of prote 100.0 6.6E-36 2.3E-40 321.1 35.3 251 380-659 4-287 (379)
46 1k8k_C P40, ARP2/3 complex 41 100.0 9.7E-36 3.3E-40 319.7 36.5 246 384-659 5-274 (372)
47 1pgu_A Actin interacting prote 100.0 6E-35 2E-39 335.2 45.3 306 378-709 54-599 (615)
48 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4.6E-35 1.6E-39 324.9 42.7 294 381-709 112-423 (445)
49 4gqb_B Methylosome protein 50; 100.0 2.4E-36 8.1E-41 325.2 30.7 229 456-709 78-316 (344)
50 3mkq_A Coatomer beta'-subunit; 100.0 2.3E-35 8E-40 351.2 42.3 281 380-661 6-304 (814)
51 3sfz_A APAF-1, apoptotic pepti 100.0 1.1E-35 3.6E-40 371.1 40.9 334 376-709 604-1101(1249)
52 4h5i_A Guanine nucleotide-exch 100.0 1.3E-35 4.3E-40 322.0 36.0 272 386-659 13-343 (365)
53 1r5m_A SIR4-interacting protei 100.0 4.7E-36 1.6E-40 327.0 32.5 271 386-658 107-424 (425)
54 2xzm_R RACK1; ribosome, transl 100.0 1.1E-35 3.8E-40 318.8 34.9 247 378-659 67-340 (343)
55 3frx_A Guanine nucleotide-bind 100.0 9.4E-35 3.2E-39 308.7 41.0 273 420-710 19-304 (319)
56 3v7d_B Cell division control p 100.0 9.1E-35 3.1E-39 323.6 42.0 300 378-709 112-449 (464)
57 2oaj_A Protein SNI1; WD40 repe 100.0 1.1E-35 3.8E-40 358.9 37.0 198 379-579 9-246 (902)
58 2hes_X YDR267CP; beta-propelle 100.0 5.1E-35 1.7E-39 312.2 36.9 267 420-709 16-313 (330)
59 2j04_B YDR362CP, TAU91; beta p 100.0 8.9E-37 3.1E-41 346.4 24.3 313 385-710 131-504 (524)
60 1erj_A Transcriptional repress 100.0 1E-34 3.5E-39 317.5 39.8 267 418-709 64-374 (393)
61 3iz6_a 40S ribosomal protein R 100.0 5.3E-36 1.8E-40 326.3 28.6 275 417-710 65-362 (380)
62 4g56_B MGC81050 protein; prote 100.0 7.7E-36 2.6E-40 322.5 29.4 293 391-709 9-328 (357)
63 3dw8_B Serine/threonine-protei 100.0 8.9E-36 3.1E-40 328.9 29.5 303 386-710 27-434 (447)
64 2pm9_A Protein WEB1, protein t 100.0 1.6E-36 5.6E-41 331.2 22.5 276 384-659 64-414 (416)
65 3gre_A Serine/threonine-protei 100.0 9.9E-36 3.4E-40 328.7 28.7 278 378-656 53-437 (437)
66 4e54_B DNA damage-binding prot 100.0 1.7E-35 5.7E-40 328.2 28.4 277 381-710 113-418 (435)
67 3dwl_C Actin-related protein 2 100.0 2.2E-36 7.6E-41 326.6 20.6 272 384-657 8-377 (377)
68 4aez_A CDC20, WD repeat-contai 100.0 1.9E-34 6.6E-39 315.7 34.4 278 380-662 84-383 (401)
69 1yfq_A Cell cycle arrest prote 100.0 1.3E-34 4.5E-39 307.5 31.4 268 384-709 8-308 (342)
70 3sfz_A APAF-1, apoptotic pepti 100.0 1.1E-33 3.7E-38 353.0 43.7 330 378-709 648-1143(1249)
71 2oaj_A Protein SNI1; WD40 repe 100.0 3.4E-34 1.2E-38 345.9 37.5 309 380-709 92-646 (902)
72 2pm7_B Protein transport prote 100.0 5.2E-34 1.8E-38 299.6 32.7 238 454-709 3-270 (297)
73 4gga_A P55CDC, cell division c 100.0 3.1E-33 1.1E-37 308.3 40.4 268 389-661 107-397 (420)
74 4a11_B DNA excision repair pro 100.0 2.9E-33 9.9E-38 303.6 37.9 282 380-662 36-368 (408)
75 1pgu_A Actin interacting prote 100.0 1.9E-33 6.3E-38 322.8 38.1 270 385-659 16-328 (615)
76 2j04_A TAU60, YPL007P, hypothe 100.0 4.6E-35 1.6E-39 327.0 23.7 306 386-709 14-346 (588)
77 2ovr_B FBW7, F-BOX/WD repeat p 100.0 6.4E-33 2.2E-37 307.6 40.7 271 379-659 151-442 (445)
78 1p22_A F-BOX/WD-repeat protein 100.0 2.6E-33 8.7E-38 310.2 37.3 268 383-709 129-399 (435)
79 3mmy_A MRNA export factor; mRN 100.0 3E-33 1E-37 298.7 36.4 278 376-709 28-331 (368)
80 3jro_A Fusion protein of prote 100.0 1.7E-34 5.9E-39 342.6 29.0 251 381-660 3-286 (753)
81 1k8k_C P40, ARP2/3 complex 41 100.0 2E-33 6.9E-38 301.6 33.8 253 379-661 44-363 (372)
82 3zwl_B Eukaryotic translation 100.0 2.1E-32 7.1E-37 292.3 40.5 267 418-709 32-331 (369)
83 3vl1_A 26S proteasome regulato 100.0 1.8E-33 6.3E-38 308.0 32.9 271 388-659 98-419 (420)
84 4ggc_A P55CDC, cell division c 100.0 1.6E-32 5.4E-37 288.0 38.5 266 390-660 28-316 (318)
85 1sq9_A Antiviral protein SKI8; 100.0 2.1E-33 7.1E-38 304.9 31.6 279 420-705 18-366 (397)
86 2xyi_A Probable histone-bindin 100.0 2.2E-33 7.6E-38 310.7 32.1 263 376-659 117-410 (430)
87 2aq5_A Coronin-1A; WD40 repeat 100.0 1.4E-33 4.9E-38 308.5 29.6 274 389-709 36-329 (402)
88 2j04_B YDR362CP, TAU91; beta p 100.0 4.8E-34 1.7E-38 323.9 26.5 259 380-659 200-517 (524)
89 3dm0_A Maltose-binding peripla 100.0 2.5E-32 8.6E-37 320.8 40.3 285 419-709 383-678 (694)
90 3k26_A Polycomb protein EED; W 100.0 2.2E-33 7.7E-38 299.8 28.6 270 419-709 19-351 (366)
91 3bg1_A Protein SEC13 homolog; 100.0 8.8E-34 3E-38 300.8 24.2 236 455-709 8-278 (316)
92 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.8E-32 9.6E-37 303.4 36.0 301 388-709 5-370 (450)
93 3odt_A Protein DOA1; ubiquitin 100.0 1.1E-31 3.7E-36 280.6 38.3 261 417-709 17-282 (313)
94 3mkq_A Coatomer beta'-subunit; 100.0 4.9E-32 1.7E-36 322.5 37.9 246 414-659 9-259 (814)
95 3dwl_C Actin-related protein 2 100.0 1.9E-33 6.4E-38 303.7 22.8 246 411-658 4-280 (377)
96 3jrp_A Fusion protein of prote 100.0 2.9E-32 9.9E-37 292.6 31.4 240 452-709 3-272 (379)
97 3i2n_A WD repeat-containing pr 100.0 2.5E-32 8.5E-37 291.0 30.5 286 419-709 19-337 (357)
98 4aez_A CDC20, WD repeat-contai 100.0 7.7E-32 2.6E-36 295.1 35.2 255 431-709 104-365 (401)
99 3ei3_B DNA damage-binding prot 100.0 3.6E-32 1.2E-36 294.7 31.9 262 420-709 75-368 (383)
100 3gre_A Serine/threonine-protei 100.0 1E-32 3.5E-37 304.6 27.1 289 419-709 64-425 (437)
101 3v7d_B Cell division control p 100.0 2.3E-31 7.7E-36 296.1 37.9 269 379-655 154-459 (464)
102 1p22_A F-BOX/WD-repeat protein 100.0 7.5E-32 2.6E-36 298.5 31.4 240 379-661 165-416 (435)
103 3f3f_A Nucleoporin SEH1; struc 100.0 1.8E-31 6E-36 281.5 31.4 256 454-709 5-322 (351)
104 2aq5_A Coronin-1A; WD40 repeat 100.0 3.7E-32 1.3E-36 297.3 26.3 253 382-660 76-343 (402)
105 4aow_A Guanine nucleotide-bind 100.0 1.6E-30 5.6E-35 275.3 38.1 275 419-709 39-322 (340)
106 3vu4_A KMHSV2; beta-propeller 100.0 8.3E-31 2.8E-35 282.8 35.5 237 381-660 13-272 (355)
107 4e54_B DNA damage-binding prot 100.0 2.4E-32 8.2E-37 302.7 23.5 252 378-660 155-431 (435)
108 4a11_B DNA excision repair pro 100.0 5.4E-31 1.9E-35 285.6 28.9 270 439-709 22-350 (408)
109 1yfq_A Cell cycle arrest prote 100.0 1.3E-30 4.3E-35 276.7 30.4 241 379-657 48-322 (342)
110 4gga_A P55CDC, cell division c 100.0 8.7E-30 3E-34 280.7 37.8 251 432-709 118-380 (420)
111 2xyi_A Probable histone-bindin 100.0 1E-30 3.5E-35 289.3 30.2 248 453-709 121-395 (430)
112 3dw8_B Serine/threonine-protei 100.0 1.4E-30 4.7E-35 287.3 29.9 273 379-658 73-445 (447)
113 4gq1_A NUP37; propeller, trans 100.0 1.2E-31 4.2E-36 293.4 20.7 248 384-658 86-388 (393)
114 3lrv_A PRE-mRNA-splicing facto 100.0 8.4E-31 2.9E-35 280.6 25.4 256 394-657 43-331 (343)
115 4gq1_A NUP37; propeller, trans 100.0 7.5E-31 2.6E-35 287.1 24.3 232 455-709 84-375 (393)
116 2vdu_B TRNA (guanine-N(7)-)-me 100.0 9.1E-30 3.1E-34 283.1 31.7 247 383-660 98-392 (450)
117 3bws_A Protein LP49; two-domai 100.0 1.7E-28 5.7E-33 269.9 38.4 270 386-659 121-432 (433)
118 4ggc_A P55CDC, cell division c 100.0 3.6E-28 1.2E-32 254.7 39.0 251 432-709 38-300 (318)
119 3jro_A Fusion protein of prote 100.0 6.2E-30 2.1E-34 303.5 28.3 238 454-709 3-270 (753)
120 4h5i_A Guanine nucleotide-exch 100.0 9.2E-30 3.1E-34 275.8 24.3 234 380-617 66-343 (365)
121 3mmy_A MRNA export factor; mRN 100.0 1E-28 3.5E-33 263.5 31.0 245 380-659 79-346 (368)
122 3lrv_A PRE-mRNA-splicing facto 100.0 2.5E-29 8.6E-34 269.1 25.6 229 428-662 46-295 (343)
123 2w18_A PALB2, fancn, partner a 100.0 3.9E-28 1.3E-32 255.9 29.4 251 378-657 77-355 (356)
124 1l0q_A Surface layer protein; 100.0 4.4E-27 1.5E-31 254.9 38.1 257 400-661 3-277 (391)
125 3bws_A Protein LP49; two-domai 100.0 1.7E-27 5.9E-32 261.9 34.5 256 427-709 131-416 (433)
126 2j04_A TAU60, YPL007P, hypothe 100.0 2.5E-28 8.4E-33 272.8 22.1 243 421-709 18-283 (588)
127 2w18_A PALB2, fancn, partner a 100.0 1.6E-27 5.4E-32 251.3 25.7 223 380-615 103-355 (356)
128 2hqs_A Protein TOLB; TOLB, PAL 100.0 4.3E-26 1.5E-30 251.4 34.5 288 387-704 62-408 (415)
129 1l0q_A Surface layer protein; 100.0 1.9E-25 6.5E-30 242.1 38.5 247 433-708 5-258 (391)
130 3vu4_A KMHSV2; beta-propeller 100.0 2.7E-26 9.3E-31 247.3 29.2 231 389-659 60-336 (355)
131 2ecf_A Dipeptidyl peptidase IV 99.9 3E-25 1E-29 261.8 31.5 296 387-709 36-440 (741)
132 1nir_A Nitrite reductase; hemo 99.9 1.6E-23 5.6E-28 238.8 34.1 296 394-709 144-494 (543)
133 1nir_A Nitrite reductase; hemo 99.9 3E-23 1E-27 236.6 33.0 280 380-662 172-517 (543)
134 2ojh_A Uncharacterized protein 99.9 9.6E-24 3.3E-28 217.2 24.8 246 439-709 21-287 (297)
135 3vgz_A Uncharacterized protein 99.9 3.8E-22 1.3E-26 212.2 37.5 265 386-708 39-328 (353)
136 1k32_A Tricorn protease; prote 99.9 7.4E-23 2.5E-27 251.3 32.3 321 381-709 197-572 (1045)
137 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.7E-22 5.7E-27 222.7 31.5 224 380-640 171-409 (415)
138 1xfd_A DIP, dipeptidyl aminope 99.9 7.8E-24 2.7E-28 248.9 21.9 268 389-659 18-393 (723)
139 1ri6_A Putative isomerase YBHE 99.9 5E-22 1.7E-26 209.9 33.3 246 381-658 31-307 (343)
140 2ojh_A Uncharacterized protein 99.9 5.8E-23 2E-27 211.4 23.6 237 380-650 34-293 (297)
141 1k32_A Tricorn protease; prote 99.9 1.1E-22 3.8E-27 249.7 29.2 299 380-709 92-487 (1045)
142 3u4y_A Uncharacterized protein 99.9 1.6E-21 5.5E-26 206.1 31.2 264 394-659 4-304 (331)
143 1ri6_A Putative isomerase YBHE 99.9 2.2E-21 7.6E-26 204.9 30.0 200 458-659 35-262 (343)
144 2z3z_A Dipeptidyl aminopeptida 99.9 5.3E-22 1.8E-26 232.9 26.9 262 390-659 28-391 (706)
145 2z3z_A Dipeptidyl aminopeptida 99.9 1.8E-21 6.1E-26 228.4 30.7 269 388-661 82-437 (706)
146 2ecf_A Dipeptidyl peptidase IV 99.9 7.3E-22 2.5E-26 232.9 25.3 235 421-658 39-366 (741)
147 1pby_B Quinohemoprotein amine 99.9 5.1E-21 1.7E-25 201.6 28.4 255 400-661 2-312 (337)
148 3u4y_A Uncharacterized protein 99.9 8.9E-21 3E-25 200.3 29.1 225 433-660 13-253 (331)
149 2oit_A Nucleoporin 214KDA; NH2 99.9 1.5E-21 5E-26 216.5 22.9 253 388-658 37-332 (434)
150 3hfq_A Uncharacterized protein 99.9 2.9E-20 1E-24 198.2 32.1 249 382-659 34-317 (347)
151 3o4h_A Acylamino-acid-releasin 99.9 1.2E-21 4.1E-26 224.9 22.5 229 388-657 22-274 (582)
152 1jmx_B Amine dehydrogenase; ox 99.9 1.7E-20 5.8E-25 198.9 27.8 231 392-660 4-326 (349)
153 3vgz_A Uncharacterized protein 99.9 1.1E-19 3.9E-24 193.0 34.3 230 387-650 88-335 (353)
154 2oit_A Nucleoporin 214KDA; NH2 99.9 4.3E-21 1.5E-25 212.7 22.9 200 460-661 36-280 (434)
155 3scy_A Hypothetical bacterial 99.9 4E-19 1.4E-23 190.7 34.3 242 386-659 48-337 (361)
156 3hfq_A Uncharacterized protein 99.9 2.8E-19 9.5E-24 190.6 31.5 233 456-709 35-301 (347)
157 1xfd_A DIP, dipeptidyl aminope 99.9 3.9E-20 1.3E-24 217.3 26.2 259 389-648 62-429 (723)
158 1z68_A Fibroblast activation p 99.8 1E-20 3.6E-25 222.4 20.0 261 392-659 20-391 (719)
159 1pby_B Quinohemoprotein amine 99.8 2.6E-19 8.8E-24 188.5 27.3 222 432-659 3-269 (337)
160 3scy_A Hypothetical bacterial 99.8 2.7E-18 9.2E-23 184.2 33.1 229 459-709 48-321 (361)
161 1jof_A Carboxy-CIS,CIS-muconat 99.8 9E-19 3.1E-23 189.0 26.3 242 387-659 39-341 (365)
162 3pe7_A Oligogalacturonate lyas 99.8 5.9E-19 2E-23 190.6 23.8 248 379-659 22-329 (388)
163 3fvz_A Peptidyl-glycine alpha- 99.8 3.3E-18 1.1E-22 181.9 28.9 263 388-659 24-322 (329)
164 1q7f_A NHL, brain tumor CG1071 99.8 7.8E-17 2.7E-21 166.9 34.4 243 386-659 28-280 (286)
165 3o4h_A Acylamino-acid-releasin 99.8 2.5E-18 8.6E-23 197.2 23.1 234 383-658 59-314 (582)
166 4a5s_A Dipeptidyl peptidase 4 99.8 4E-18 1.4E-22 201.5 25.0 264 389-658 18-397 (740)
167 1z68_A Fibroblast activation p 99.8 8.5E-19 2.9E-23 206.1 18.6 270 389-661 61-445 (719)
168 1jof_A Carboxy-CIS,CIS-muconat 99.8 6E-17 2.1E-21 174.6 28.8 199 459-658 38-290 (365)
169 1jmx_B Amine dehydrogenase; ox 99.8 2.8E-17 9.6E-22 173.9 24.8 189 465-659 4-284 (349)
170 3azo_A Aminopeptidase; POP fam 99.8 1.4E-17 4.7E-22 193.8 24.0 242 383-658 19-322 (662)
171 3c5m_A Oligogalacturonate lyas 99.8 2.5E-17 8.7E-22 177.7 20.9 264 390-658 38-381 (396)
172 3e5z_A Putative gluconolactona 99.7 8.7E-16 3E-20 160.0 27.8 231 381-650 21-278 (296)
173 2gop_A Trilobed protease; beta 99.7 6.7E-16 2.3E-20 164.0 27.3 252 388-658 15-330 (347)
174 2oiz_A Aromatic amine dehydrog 99.7 7.2E-16 2.5E-20 166.3 27.8 240 439-706 30-360 (361)
175 3pe7_A Oligogalacturonate lyas 99.7 2.3E-16 8E-21 170.2 23.4 215 445-661 15-275 (388)
176 2xdw_A Prolyl endopeptidase; a 99.7 8E-16 2.7E-20 180.9 29.6 243 386-661 123-416 (710)
177 3azo_A Aminopeptidase; POP fam 99.7 5.1E-16 1.8E-20 180.4 27.2 198 459-659 128-369 (662)
178 3fvz_A Peptidyl-glycine alpha- 99.7 3.1E-15 1.1E-19 158.9 29.2 225 460-709 23-307 (329)
179 4a5s_A Dipeptidyl peptidase 4 99.7 2E-16 6.7E-21 187.0 20.2 233 424-660 22-354 (740)
180 2dg1_A DRP35, lactonase; beta 99.7 2.4E-14 8.1E-19 151.4 34.3 238 379-650 36-301 (333)
181 1rwi_B Serine/threonine-protei 99.7 2.9E-15 1E-19 153.1 26.2 239 389-659 25-264 (270)
182 2dg1_A DRP35, lactonase; beta 99.7 2E-14 6.9E-19 151.9 33.2 205 452-658 36-262 (333)
183 2gop_A Trilobed protease; beta 99.7 5.3E-15 1.8E-19 157.1 27.2 201 439-658 42-290 (347)
184 1q7f_A NHL, brain tumor CG1071 99.7 2.6E-14 8.8E-19 147.8 30.6 197 458-658 27-237 (286)
185 3c5m_A Oligogalacturonate lyas 99.7 6.5E-16 2.2E-20 166.6 18.9 232 424-660 41-330 (396)
186 2z2n_A Virginiamycin B lyase; 99.7 3.5E-13 1.2E-17 139.2 38.5 272 381-659 8-295 (299)
187 2oiz_A Aromatic amine dehydrog 99.7 3.1E-14 1.1E-18 153.5 30.1 244 392-641 54-360 (361)
188 3no2_A Uncharacterized protein 99.7 3.1E-14 1E-18 147.7 28.5 213 398-647 4-231 (276)
189 2bkl_A Prolyl endopeptidase; m 99.7 1.7E-15 5.8E-20 177.7 21.1 241 386-661 119-399 (695)
190 3e5z_A Putative gluconolactona 99.7 2.7E-14 9.3E-19 148.7 27.1 200 453-658 20-245 (296)
191 3dsm_A Uncharacterized protein 99.6 5.1E-14 1.8E-18 149.6 25.9 246 407-658 15-301 (328)
192 2xdw_A Prolyl endopeptidase; a 99.6 9.7E-14 3.3E-18 163.1 30.5 199 459-659 123-368 (710)
193 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 2.2E-13 7.4E-18 142.3 29.0 247 382-659 12-299 (314)
194 2z2n_A Virginiamycin B lyase; 99.6 6.5E-12 2.2E-16 129.5 37.6 243 409-657 3-253 (299)
195 2bkl_A Prolyl endopeptidase; m 99.6 4E-14 1.4E-18 166.0 21.9 196 458-658 118-348 (695)
196 1yr2_A Prolyl oligopeptidase; 99.6 1.1E-13 3.9E-18 163.4 24.9 239 388-661 163-443 (741)
197 2qc5_A Streptogramin B lactona 99.6 8.8E-12 3E-16 128.6 36.2 268 382-657 14-298 (300)
198 3no2_A Uncharacterized protein 99.6 3.5E-13 1.2E-17 139.7 24.9 232 471-708 4-256 (276)
199 1qks_A Cytochrome CD1 nitrite 99.6 9E-12 3.1E-16 142.0 36.9 275 386-661 195-540 (567)
200 1rwi_B Serine/threonine-protei 99.6 6.3E-13 2.2E-17 135.6 24.8 197 462-659 25-222 (270)
201 3dsm_A Uncharacterized protein 99.5 3.2E-12 1.1E-16 135.6 30.4 219 436-661 13-255 (328)
202 1qks_A Cytochrome CD1 nitrite 99.5 1.5E-11 5E-16 140.2 37.4 262 397-660 165-478 (567)
203 3hrp_A Uncharacterized protein 99.5 4.7E-12 1.6E-16 138.8 32.2 234 388-657 131-408 (409)
204 3g4e_A Regucalcin; six bladed 99.5 1.2E-11 4.1E-16 129.1 30.9 227 387-648 12-261 (297)
205 1yr2_A Prolyl oligopeptidase; 99.5 1.7E-12 5.7E-17 153.4 26.8 196 459-658 161-392 (741)
206 1xip_A Nucleoporin NUP159; bet 99.5 3.4E-13 1.2E-17 145.8 18.2 172 462-647 39-232 (388)
207 1xip_A Nucleoporin NUP159; bet 99.5 7.8E-13 2.7E-17 142.9 17.9 182 389-604 39-231 (388)
208 2ghs_A AGR_C_1268P; regucalcin 99.5 5.5E-11 1.9E-15 126.0 31.5 222 389-649 50-292 (326)
209 3iuj_A Prolyl endopeptidase; h 99.5 9.6E-12 3.3E-16 145.8 27.5 237 386-660 127-406 (693)
210 2qc5_A Streptogramin B lactona 99.5 2.6E-10 8.8E-15 117.5 35.2 218 436-658 37-259 (300)
211 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 3.8E-11 1.3E-15 125.1 29.0 197 458-658 15-255 (314)
212 3dr2_A Exported gluconolactona 99.4 2.2E-11 7.5E-16 127.5 26.2 234 380-653 37-301 (305)
213 2mad_H Methylamine dehydrogena 99.4 2.6E-10 8.9E-15 123.3 34.9 217 439-662 96-353 (373)
214 3hrp_A Uncharacterized protein 99.4 3.7E-10 1.3E-14 123.7 34.4 195 461-659 131-354 (409)
215 3g4e_A Regucalcin; six bladed 99.4 2.9E-10 9.9E-15 118.5 31.2 219 459-705 11-253 (297)
216 3sjl_D Methylamine dehydrogena 99.4 1.8E-10 6.2E-15 124.0 27.7 263 394-661 39-365 (386)
217 2qe8_A Uncharacterized protein 99.4 6.6E-11 2.3E-15 126.2 23.2 244 388-656 17-318 (343)
218 2ghs_A AGR_C_1268P; regucalcin 99.3 1.6E-09 5.5E-14 114.6 32.1 189 462-657 50-258 (326)
219 2mad_H Methylamine dehydrogena 99.3 3.2E-09 1.1E-13 114.8 34.1 208 444-659 51-307 (373)
220 3dr2_A Exported gluconolactona 99.3 3E-10 1E-14 118.8 24.3 199 452-658 36-266 (305)
221 3c75_H MADH, methylamine dehyd 99.3 5.7E-10 2E-14 122.1 24.5 219 441-662 100-405 (426)
222 3sjl_D Methylamine dehydrogena 99.2 1.3E-09 4.5E-14 117.3 25.6 242 392-639 82-384 (386)
223 2qe8_A Uncharacterized protein 99.2 6.4E-10 2.2E-14 118.5 23.0 196 461-657 17-276 (343)
224 1yiq_A Quinohemoprotein alcoho 99.2 2.1E-09 7.2E-14 125.6 29.3 262 399-662 70-508 (689)
225 3iuj_A Prolyl endopeptidase; h 99.2 3.8E-10 1.3E-14 132.1 21.8 196 459-659 127-359 (693)
226 2hz6_A Endoplasmic reticulum t 99.2 3.7E-12 1.3E-16 137.6 3.3 182 471-661 8-194 (369)
227 2hz6_A Endoplasmic reticulum t 99.2 3.9E-12 1.3E-16 137.5 3.2 205 398-642 8-217 (369)
228 1kb0_A Quinohemoprotein alcoho 99.2 3.5E-09 1.2E-13 123.5 28.3 261 398-659 127-567 (677)
229 1kb0_A Quinohemoprotein alcoho 99.2 1.7E-09 5.9E-14 126.0 25.6 263 399-663 77-511 (677)
230 1yiq_A Quinohemoprotein alcoho 99.2 5.8E-09 2E-13 121.9 29.3 247 398-645 120-534 (689)
231 3q7m_A Lipoprotein YFGL, BAMB; 99.2 2.2E-08 7.6E-13 107.5 30.5 249 398-656 102-375 (376)
232 3hxj_A Pyrrolo-quinoline quino 99.1 1.6E-09 5.5E-14 113.5 19.8 257 388-659 60-324 (330)
233 1mda_H Methylamine dehydrogena 99.1 1.2E-09 4E-14 117.6 18.9 214 441-661 47-348 (368)
234 3q7m_A Lipoprotein YFGL, BAMB; 99.1 2.8E-08 9.5E-13 106.7 29.5 251 399-661 53-339 (376)
235 3hxj_A Pyrrolo-quinoline quino 99.1 4.7E-09 1.6E-13 109.9 19.7 248 393-657 25-282 (330)
236 3c75_H MADH, methylamine dehyd 99.1 4.6E-08 1.6E-12 107.0 27.1 185 439-624 148-409 (426)
237 1npe_A Nidogen, entactin; glyc 99.0 6.1E-07 2.1E-11 91.4 33.5 196 461-659 36-238 (267)
238 2ece_A 462AA long hypothetical 99.0 4.5E-08 1.5E-12 106.3 25.5 184 463-647 140-399 (462)
239 2fp8_A Strictosidine synthase; 99.0 9.8E-08 3.4E-12 100.3 27.0 269 375-659 6-313 (322)
240 2iwa_A Glutamine cyclotransfer 99.0 1.1E-07 3.7E-12 97.1 25.9 195 462-660 22-238 (266)
241 2ece_A 462AA long hypothetical 99.0 2.3E-07 8E-12 100.7 29.1 192 467-659 88-352 (462)
242 3nol_A Glutamine cyclotransfer 98.9 2.2E-07 7.4E-12 94.0 24.2 185 458-649 38-245 (262)
243 1kv9_A Type II quinohemoprotei 98.9 1.5E-07 5.2E-12 109.5 24.8 261 399-662 66-491 (668)
244 1npe_A Nidogen, entactin; glyc 98.9 2.8E-06 9.7E-11 86.4 31.2 220 388-641 36-263 (267)
245 4a2l_A BT_4663, two-component 98.9 6.2E-06 2.1E-10 97.8 38.1 263 390-659 175-480 (795)
246 1kv9_A Type II quinohemoprotei 98.8 9.6E-07 3.3E-11 102.7 28.8 248 399-647 117-520 (668)
247 1mda_H Methylamine dehydrogena 98.8 2.7E-07 9.4E-12 99.1 21.3 233 392-638 69-366 (368)
248 3mbr_X Glutamine cyclotransfer 98.8 2.1E-06 7.2E-11 86.0 25.1 190 453-649 12-224 (243)
249 2p4o_A Hypothetical protein; p 98.8 1.2E-05 4.2E-10 83.6 31.9 226 388-650 32-279 (306)
250 1fwx_A Nitrous oxide reductase 98.8 1.8E-07 6.1E-12 105.0 18.4 186 471-659 100-361 (595)
251 4a2l_A BT_4663, two-component 98.7 1.4E-05 4.7E-10 94.8 35.1 264 387-659 214-526 (795)
252 1fwx_A Nitrous oxide reductase 98.7 3.1E-07 1.1E-11 103.0 19.1 195 462-659 135-431 (595)
253 2iwa_A Glutamine cyclotransfer 98.7 4.7E-06 1.6E-10 85.0 26.2 198 385-618 16-238 (266)
254 3nok_A Glutaminyl cyclase; bet 98.7 4.2E-06 1.4E-10 84.6 24.8 180 462-648 56-254 (268)
255 2ad6_A Methanol dehydrogenase 98.7 3.5E-06 1.2E-10 96.0 27.4 228 432-662 117-497 (571)
256 2ad6_A Methanol dehydrogenase 98.7 3E-06 1E-10 96.6 26.9 245 399-645 115-523 (571)
257 1w6s_A Methanol dehydrogenase 98.6 5.5E-06 1.9E-10 94.7 25.6 244 402-646 124-534 (599)
258 3nol_A Glutamine cyclotransfer 98.6 7.9E-06 2.7E-10 82.6 23.0 186 384-606 37-244 (262)
259 1w6s_A Methanol dehydrogenase 98.6 1E-05 3.5E-10 92.4 26.5 228 433-663 124-507 (599)
260 2fp8_A Strictosidine synthase; 98.6 1.8E-05 6.2E-10 82.8 26.6 190 462-657 20-267 (322)
261 1flg_A Protein (quinoprotein e 98.6 3.2E-05 1.1E-09 88.2 30.4 244 399-644 117-544 (582)
262 1flg_A Protein (quinoprotein e 98.6 3.8E-05 1.3E-09 87.6 30.8 230 432-662 119-519 (582)
263 3qqz_A Putative uncharacterize 98.5 4.4E-05 1.5E-09 77.3 27.5 200 454-656 20-250 (255)
264 1k3i_A Galactose oxidase precu 98.5 2.8E-06 9.7E-11 98.5 20.8 199 461-659 243-497 (656)
265 3v9f_A Two-component system se 98.5 0.00011 3.8E-09 86.8 34.2 264 388-659 211-524 (781)
266 2xe4_A Oligopeptidase B; hydro 98.5 9.2E-06 3.2E-10 95.7 24.7 236 389-659 175-458 (751)
267 3v64_C Agrin; beta propeller, 98.5 8.1E-05 2.8E-09 79.2 29.9 197 460-658 72-274 (349)
268 2p4o_A Hypothetical protein; p 98.5 0.0001 3.4E-09 76.7 30.0 202 451-658 23-241 (306)
269 3v9f_A Two-component system se 98.5 7.6E-05 2.6E-09 88.2 31.8 265 387-659 257-568 (781)
270 1ijq_A LDL receptor, low-densi 98.5 0.00026 9E-09 74.0 32.4 199 460-660 29-239 (316)
271 3v65_B Low-density lipoprotein 98.5 0.00013 4.6E-09 78.6 30.1 199 460-659 115-318 (386)
272 3nok_A Glutaminyl cyclase; bet 98.4 1.4E-05 4.7E-10 80.8 20.5 180 389-606 56-254 (268)
273 3tc9_A Hypothetical hydrolase; 98.4 5.4E-05 1.8E-09 83.0 26.8 198 459-658 177-429 (430)
274 2xe4_A Oligopeptidase B; hydro 98.4 3.2E-06 1.1E-10 99.7 16.9 192 462-657 175-398 (751)
275 3mbr_X Glutamine cyclotransfer 98.4 0.00013 4.3E-09 73.1 25.6 181 388-606 21-223 (243)
276 4hw6_A Hypothetical protein, I 98.4 7E-05 2.4E-09 82.2 25.8 195 460-658 181-432 (433)
277 3p5b_L Low density lipoprotein 98.4 0.00055 1.9E-08 74.2 32.0 201 459-660 110-321 (400)
278 3v64_C Agrin; beta propeller, 98.3 0.00032 1.1E-08 74.5 29.0 209 385-625 70-283 (349)
279 3sov_A LRP-6, low-density lipo 98.3 0.00031 1E-08 73.7 27.5 200 461-661 35-240 (318)
280 1ijq_A LDL receptor, low-densi 98.3 0.00098 3.4E-08 69.6 31.0 183 474-659 3-195 (316)
281 3qqz_A Putative uncharacterize 98.3 0.00046 1.6E-08 69.8 26.5 199 383-615 22-251 (255)
282 2xbg_A YCF48-like protein; pho 98.2 0.00084 2.9E-08 70.5 29.7 261 385-657 33-320 (327)
283 3p5b_L Low density lipoprotein 98.2 0.0023 7.7E-08 69.3 33.3 225 384-636 108-339 (400)
284 3v65_B Low-density lipoprotein 98.2 0.00042 1.4E-08 74.7 27.2 219 386-636 114-337 (386)
285 3amr_A 3-phytase; beta-propell 98.2 0.00033 1.1E-08 73.7 23.9 184 471-658 39-262 (355)
286 3kya_A Putative phosphatase; s 98.1 0.00083 2.8E-08 74.3 26.5 196 461-662 186-478 (496)
287 3tc9_A Hypothetical hydrolase; 98.1 0.00032 1.1E-08 76.9 22.8 193 462-656 138-368 (430)
288 3sov_A LRP-6, low-density lipo 98.1 0.0012 3.9E-08 69.3 26.0 163 462-625 80-246 (318)
289 4hw6_A Hypothetical protein, I 98.0 0.00041 1.4E-08 76.0 22.3 194 462-657 140-372 (433)
290 1k3i_A Galactose oxidase precu 98.0 4.5E-05 1.5E-09 88.4 15.2 227 391-648 246-530 (656)
291 3m0c_C LDL receptor, low-densi 98.0 0.0038 1.3E-07 73.4 30.6 217 442-660 406-633 (791)
292 2p9w_A MAL S 1 allergenic prot 98.0 0.0012 4.2E-08 68.8 23.4 196 462-658 14-264 (334)
293 3m0c_C LDL receptor, low-densi 97.9 0.0039 1.3E-07 73.3 29.4 164 460-625 470-640 (791)
294 3s94_A LRP-6, low-density lipo 97.8 0.0034 1.2E-07 71.9 26.7 201 459-660 38-244 (619)
295 2ism_A Putative oxidoreductase 97.8 0.0071 2.4E-07 64.1 27.4 238 379-647 22-333 (352)
296 3amr_A 3-phytase; beta-propell 97.8 0.0053 1.8E-07 64.5 24.9 143 481-625 98-272 (355)
297 4a0p_A LRP6, LRP-6, low-densit 97.8 0.018 6.3E-07 65.9 30.8 197 461-660 37-238 (628)
298 3a9g_A Putative uncharacterize 97.7 0.025 8.4E-07 60.0 29.7 238 378-647 19-330 (354)
299 2xbg_A YCF48-like protein; pho 97.7 0.0054 1.9E-07 64.2 23.9 151 458-614 160-319 (327)
300 3das_A Putative oxidoreductase 97.7 0.083 2.8E-06 55.6 32.3 245 376-647 20-326 (347)
301 1n7d_A LDL receptor, low-densi 97.6 0.00013 4.6E-09 85.0 10.8 218 440-659 386-614 (699)
302 2p9w_A MAL S 1 allergenic prot 97.6 0.0028 9.7E-08 66.0 19.4 159 500-659 10-215 (334)
303 2g8s_A Glucose/sorbosone dehyd 97.6 0.039 1.3E-06 58.4 28.8 249 380-657 10-350 (353)
304 3kya_A Putative phosphatase; s 97.6 0.0062 2.1E-07 67.3 22.9 195 462-657 140-408 (496)
305 2vpj_A Kelch-like protein 12; 97.5 0.0053 1.8E-07 63.0 19.9 181 471-659 62-278 (301)
306 3ei3_A DNA damage-binding prot 97.5 0.16 5.3E-06 62.3 35.8 265 387-660 553-914 (1158)
307 1n7d_A LDL receptor, low-densi 97.5 0.0002 6.9E-09 83.4 9.2 174 463-637 455-634 (699)
308 2ism_A Putative oxidoreductase 97.5 0.033 1.1E-06 58.9 25.7 192 461-658 31-296 (352)
309 3s94_A LRP-6, low-density lipo 97.4 0.018 6.2E-07 65.9 24.8 205 388-623 40-249 (619)
310 4a0p_A LRP6, LRP-6, low-densit 97.4 0.16 5.3E-06 58.2 32.2 164 460-625 388-557 (628)
311 2xn4_A Kelch-like protein 2; s 97.4 0.0095 3.3E-07 61.1 20.0 181 471-659 61-276 (302)
312 1bpo_A Protein (clathrin); cla 97.4 0.22 7.5E-06 53.5 32.3 247 408-659 47-331 (494)
313 3sre_A PON1, serum paraoxonase 97.4 0.018 6.1E-07 61.0 22.1 161 461-625 112-308 (355)
314 3ii7_A Kelch-like protein 7; p 97.3 0.009 3.1E-07 61.4 19.0 181 471-659 55-272 (306)
315 3a9g_A Putative uncharacterize 97.3 0.088 3E-06 55.6 27.0 195 460-659 28-296 (354)
316 2xzh_A Clathrin heavy chain 1; 97.3 0.21 7.2E-06 51.6 33.4 224 468-709 74-327 (365)
317 2xzh_A Clathrin heavy chain 1; 97.3 0.23 7.8E-06 51.4 31.6 217 439-659 86-332 (365)
318 3sre_A PON1, serum paraoxonase 97.2 0.036 1.2E-06 58.6 22.3 190 463-656 52-295 (355)
319 3ott_A Two-component system se 97.2 0.23 7.8E-06 58.0 31.3 231 387-659 21-260 (758)
320 1bpo_A Protein (clathrin); cla 97.2 0.35 1.2E-05 52.0 34.9 248 440-709 48-326 (494)
321 1cru_A Protein (soluble quinop 97.1 0.5 1.7E-05 51.7 30.8 122 378-522 17-163 (454)
322 2vpj_A Kelch-like protein 12; 97.1 0.027 9.3E-07 57.5 19.2 144 471-620 112-281 (301)
323 4asc_A Kelch repeat and BTB do 96.9 0.049 1.7E-06 56.1 19.7 183 469-659 43-277 (315)
324 3pbp_A Nucleoporin NUP82; beta 96.9 0.09 3.1E-06 56.4 21.2 139 513-654 31-207 (452)
325 1zgk_A Kelch-like ECH-associat 96.8 0.024 8.1E-07 58.4 15.7 181 471-659 70-287 (308)
326 3pbp_A Nucleoporin NUP82; beta 96.8 0.07 2.4E-06 57.2 19.2 141 470-613 30-208 (452)
327 3ei3_A DNA damage-binding prot 96.7 1.7 6E-05 53.1 33.9 172 483-659 808-999 (1158)
328 3ii7_A Kelch-like protein 7; p 96.7 0.12 4.1E-06 52.8 20.4 173 440-620 70-275 (306)
329 3ott_A Two-component system se 96.6 1.2 3.9E-05 51.9 30.8 225 388-656 63-304 (758)
330 2be1_A Serine/threonine-protei 96.6 0.041 1.4E-06 57.8 16.2 178 479-660 64-298 (339)
331 3s25_A Hypothetical 7-bladed b 96.6 0.068 2.3E-06 55.2 17.8 173 467-658 59-254 (302)
332 2woz_A Kelch repeat and BTB do 96.6 0.13 4.3E-06 53.1 19.9 183 469-659 54-287 (318)
333 2xn4_A Kelch-like protein 2; s 96.5 0.061 2.1E-06 54.9 16.7 179 473-659 17-229 (302)
334 3das_A Putative oxidoreductase 96.5 1.1 3.8E-05 47.0 29.9 235 454-709 25-323 (347)
335 1xi4_A Clathrin heavy chain; a 96.4 0.21 7.1E-06 61.2 22.2 192 468-664 73-294 (1630)
336 1tl2_A L10, protein (tachylect 96.2 0.14 4.6E-06 50.1 15.5 176 472-658 4-207 (236)
337 1cru_A Protein (soluble quinop 95.9 0.76 2.6E-05 50.2 22.3 156 502-659 26-259 (454)
338 1zgk_A Kelch-like ECH-associat 95.9 0.094 3.2E-06 53.8 14.3 182 471-660 24-241 (308)
339 1xi4_A Clathrin heavy chain; a 95.8 0.43 1.5E-05 58.5 20.9 246 408-658 47-330 (1630)
340 4asc_A Kelch repeat and BTB do 95.7 0.39 1.3E-05 49.2 18.2 177 475-660 8-222 (315)
341 2be1_A Serine/threonine-protei 95.6 0.013 4.4E-07 61.6 6.0 146 473-619 11-185 (339)
342 3s25_A Hypothetical 7-bladed b 95.5 0.68 2.3E-05 47.6 18.8 171 470-659 23-216 (302)
343 2uvk_A YJHT; unknown function, 95.4 0.21 7.1E-06 52.3 14.9 132 524-659 168-342 (357)
344 2g8s_A Glucose/sorbosone dehyd 95.2 0.23 7.7E-06 52.4 14.4 142 503-645 18-214 (353)
345 2woz_A Kelch repeat and BTB do 95.2 0.88 3E-05 46.6 18.6 172 483-660 25-232 (318)
346 3sbq_A Nitrous-oxide reductase 95.2 3.9 0.00013 45.3 23.8 100 546-647 324-453 (638)
347 2uvk_A YJHT; unknown function, 95.0 0.46 1.6E-05 49.6 16.0 139 482-624 168-349 (357)
348 2wg3_C Hedgehog-interacting pr 94.8 5.8 0.0002 43.2 29.2 252 387-659 13-371 (463)
349 1tl2_A L10, protein (tachylect 94.7 0.2 6.7E-06 49.0 11.0 131 514-653 4-157 (236)
350 2zwa_A Leucine carboxyl methyl 94.4 0.71 2.4E-05 53.4 16.9 148 471-621 451-639 (695)
351 2zwa_A Leucine carboxyl methyl 94.3 1.1 3.7E-05 51.8 18.3 189 470-660 396-636 (695)
352 1suu_A DNA gyrase subunit A; t 93.0 8.4 0.00029 39.5 20.6 187 470-660 6-232 (312)
353 3sbq_A Nitrous-oxide reductase 92.8 11 0.00037 41.9 21.4 188 471-660 141-409 (638)
354 3qhy_B Beta-lactamase inhibito 92.5 0.44 1.5E-05 48.5 9.7 183 462-659 64-246 (282)
355 4hvt_A Ritya.17583.B, post-pro 90.8 27 0.00093 40.1 23.8 173 482-658 216-429 (711)
356 3qhy_B Beta-lactamase inhibito 90.7 3.1 0.0001 42.1 13.8 167 439-617 80-246 (282)
357 3b7f_A Glycosyl hydrolase, BNR 88.8 25 0.00085 36.7 23.9 183 460-646 54-296 (394)
358 3no0_A DNA gyrase subunit A; D 85.6 31 0.0011 34.5 20.8 196 462-660 25-247 (276)
359 3b7f_A Glycosyl hydrolase, BNR 84.3 42 0.0014 34.9 21.8 172 473-650 23-254 (394)
360 3q6k_A 43.2 kDa salivary prote 83.8 46 0.0016 34.9 23.4 164 483-647 124-342 (381)
361 1nxk_A MAP kinase-activated pr 82.9 0.26 8.9E-06 52.8 0.3 6 250-255 175-180 (400)
362 2wg3_C Hedgehog-interacting pr 79.0 18 0.00062 39.2 13.4 111 540-650 9-160 (463)
363 4gq2_M Nucleoporin NUP120; bet 79.0 28 0.00095 41.5 16.1 38 588-625 237-274 (950)
364 3uc1_A DNA gyrase subunit A; D 78.9 62 0.0021 33.2 21.1 145 471-616 108-278 (327)
365 4gq2_M Nucleoporin NUP120; bet 78.0 29 0.001 41.3 15.9 38 546-583 237-274 (950)
366 1uuj_A Platelet-activating fac 76.4 1.6 5.3E-05 35.7 2.8 28 91-118 12-40 (88)
367 3no0_A DNA gyrase subunit A; D 76.2 65 0.0022 32.0 20.9 144 471-616 79-245 (276)
368 3uc1_A DNA gyrase subunit A; D 75.5 76 0.0026 32.5 20.7 156 503-659 95-279 (327)
369 4hvt_A Ritya.17583.B, post-pro 74.7 89 0.003 35.8 18.2 191 464-658 132-380 (711)
370 1sqj_A OXG-RCBH, oligoxylogluc 74.0 1.3E+02 0.0046 34.6 28.1 104 461-565 64-190 (789)
371 1suu_A DNA gyrase subunit A; t 68.3 1.1E+02 0.0036 31.1 26.5 238 397-659 6-283 (312)
372 3kci_A Probable E3 ubiquitin-p 67.8 1.2E+02 0.0041 31.5 29.1 192 462-659 106-345 (389)
373 1zi0_A DNA gyrase subunit A; b 67.0 1.1E+02 0.0038 30.8 23.7 187 471-660 2-227 (307)
374 4fhn_B Nucleoporin NUP120; pro 63.6 65 0.0022 39.1 14.7 38 588-625 239-276 (1139)
375 1zi0_A DNA gyrase subunit A; b 63.0 1.3E+02 0.0045 30.3 26.3 191 468-660 49-278 (307)
376 4fhn_B Nucleoporin NUP120; pro 61.2 22 0.00077 43.3 9.9 38 546-583 239-276 (1139)
377 3kci_A Probable E3 ubiquitin-p 60.3 1.6E+02 0.0056 30.4 27.8 184 472-659 62-293 (389)
378 3l6v_A GYRA, DNA gyrase subuni 59.3 1.7E+02 0.0058 30.4 24.2 191 469-661 4-267 (370)
379 1wp5_A Topoisomerase IV; broke 59.3 1.6E+02 0.0054 30.0 24.4 144 472-616 106-276 (323)
380 3l6v_A GYRA, DNA gyrase subuni 56.7 1.9E+02 0.0064 30.1 25.6 240 395-659 3-316 (370)
381 1pk8_A RAT synapsin I; ATP bin 53.4 2.8 9.6E-05 44.8 0.0 14 382-395 307-320 (422)
382 1iap_A Guanine nucleotide exch 50.1 7.1 0.00024 37.0 2.2 40 152-200 21-60 (211)
383 3mvd_K Regulator of chromosome 49.7 2.4E+02 0.0084 29.3 33.8 189 462-659 128-374 (423)
384 3zwu_A Alkaline phosphatase PH 48.9 57 0.0019 36.5 9.7 59 588-646 477-548 (592)
385 1sqj_A OXG-RCBH, oligoxylogluc 46.9 3.8E+02 0.013 30.7 23.5 146 460-607 14-190 (789)
386 4a9v_A PHOX; hydrolase, beta-p 46.8 67 0.0023 35.7 9.7 61 587-647 476-549 (592)
387 3of7_A Regulator of chromosome 45.8 3E+02 0.01 29.3 19.9 147 503-659 148-341 (473)
388 3f7f_A Nucleoporin NUP120; nuc 44.0 1.5E+02 0.005 33.9 12.1 38 461-500 222-259 (729)
389 1oqy_A HHR23A, UV excision rep 43.9 1.4E+02 0.0049 31.0 11.3 25 92-116 168-194 (368)
390 3zwu_A Alkaline phosphatase PH 43.4 69 0.0024 35.8 9.3 60 545-604 476-548 (592)
391 3f7f_A Nucleoporin NUP120; nuc 41.6 33 0.0011 39.2 6.3 37 546-584 223-259 (729)
392 4a9v_A PHOX; hydrolase, beta-p 41.5 81 0.0028 35.0 9.3 61 545-605 476-549 (592)
393 3mez_B Mannose-specific lectin 39.7 1.7E+02 0.0057 24.5 10.0 60 556-617 24-84 (113)
394 1zvt_A Topoisomerase IV subuni 38.6 1.8E+02 0.0063 28.4 10.7 141 474-616 4-162 (256)
395 2lni_A Stress-induced-phosphop 38.4 1.4E+02 0.0048 24.1 8.8 89 94-199 22-111 (133)
396 1wp5_A Topoisomerase IV; broke 37.6 3.4E+02 0.011 27.4 23.9 146 514-660 106-278 (323)
397 1zvt_A Topoisomerase IV subuni 35.6 3.2E+02 0.011 26.6 12.8 143 516-660 4-164 (256)
398 3ab3_B RHO guanine nucleotide 35.5 5.7 0.0002 38.4 -0.9 43 151-202 74-116 (246)
399 2xtc_A F-box-like/WD repeat-co 33.7 19 0.00064 29.5 2.0 27 94-120 11-37 (90)
400 3cx8_B RHO guanine nucleotide 31.5 12 0.0004 35.4 0.5 27 173-199 51-77 (203)
401 3q6k_A 43.2 kDa salivary prote 30.1 4.9E+02 0.017 27.0 24.3 164 439-604 122-341 (381)
402 2d68_A FOP, FGFR1OP; alpha hel 29.8 27 0.00093 28.0 2.3 25 94-118 24-48 (82)
403 2h6f_A Protein farnesyltransfe 27.8 63 0.0021 33.8 5.5 20 99-118 108-127 (382)
404 1unl_D Cyclin-dependent kinase 27.2 1.6E+02 0.0056 26.8 7.1 88 82-186 42-139 (208)
405 2cn3_A Xyloglucanase, beta-1,4 26.8 7.3E+02 0.025 28.0 26.4 28 388-415 23-51 (737)
406 3ff5_A PEX14P, peroxisomal bio 25.9 35 0.0012 25.0 2.0 18 91-108 29-46 (54)
407 3pgw_A U1-A; protein-RNA compl 25.5 1.7E+02 0.0059 28.4 8.1 19 98-116 211-229 (282)
408 3mvd_K Regulator of chromosome 24.7 5.9E+02 0.02 26.2 34.6 188 462-659 76-322 (423)
409 2qko_A Possible transcriptiona 24.6 23 0.00077 33.1 1.2 32 88-119 30-62 (215)
410 2cn3_A Xyloglucanase, beta-1,4 24.5 7.9E+02 0.027 27.7 21.5 184 461-646 23-261 (737)
411 2zux_A YESW protein; beta-prop 23.9 7.6E+02 0.026 27.2 22.1 56 584-639 361-424 (591)
412 4d9s_A UVB-resistance protein 23.5 6.2E+02 0.021 26.0 32.3 257 391-655 27-353 (406)
413 3of7_A Regulator of chromosome 22.8 6.9E+02 0.024 26.3 23.3 186 461-659 148-405 (473)
414 3ulq_B Transcriptional regulat 22.8 44 0.0015 27.0 2.5 19 94-113 36-54 (90)
415 3mez_B Mannose-specific lectin 22.4 3.4E+02 0.011 22.5 9.4 25 507-533 60-84 (113)
416 1ng7_A Poliovirus 3A-N, genome 22.3 15 0.0005 27.6 -0.5 14 94-107 33-46 (60)
417 2zux_A YESW protein; beta-prop 21.2 8.5E+02 0.029 26.8 20.7 94 482-584 292-409 (591)
418 3lof_A Heat shock 70 kDa prote 20.4 96 0.0033 26.0 4.2 40 141-180 38-84 (113)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-43 Score=391.02 Aligned_cols=279 Identities=25% Similarity=0.469 Sum_probs=262.7
Q ss_pred EEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCc-----------eeeeccCccccccccccCCcEEEEEecC
Q psy14440 380 CYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK-----------LKAMKSSDQLQDIEMECDDILVRIMDER 448 (711)
Q Consensus 380 ~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~-----------~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 448 (711)
.+++.+|.+.|+|++|+|++++||+|+.||+|+|||+.+++ +..+.++.+...++.++.|+.|++||..
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 34678999999999999999999999999999999997654 3334555667788899999999999999
Q ss_pred CCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEE
Q psy14440 449 NAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARL 528 (711)
Q Consensus 449 ~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~l 528 (711)
+++.+..+.+|.+.|.+++|+|++++|++|+.|++|++||+.++.++..+.+|...|.++.|++++.+|++|+.|++|++
T Consensus 181 ~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~v 260 (410)
T 1vyh_C 181 GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260 (410)
T ss_dssp SSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EECCCCceeEEeecCCCCeeEEEEcCC--------------------CCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCC
Q psy14440 529 WATDSYHPLRLFVGHYSDVDCVQFHPN--------------------SNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAP 588 (711)
Q Consensus 529 wd~~~~~~~~~~~~h~~~V~~v~~sp~--------------------~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~ 588 (711)
||+.++.....+.+|...|.+++|+|+ +.+|++|+.|++|++||++++.++..+.+|...
T Consensus 261 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~ 340 (410)
T 1vyh_C 261 WVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340 (410)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred EECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCc
Confidence 999999999999999999999999996 678999999999999999999999999999999
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCC
Q psy14440 589 VYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFA 658 (711)
Q Consensus 589 I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~ 658 (711)
|++++|+++|++|++|+.||.|++||+.+++++..+.+|.+.|++++|++++.+|++|+.||+|+||+++
T Consensus 341 v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp EEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999963
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=6.7e-43 Score=372.34 Aligned_cols=281 Identities=20% Similarity=0.340 Sum_probs=260.2
Q ss_pred eEEEEEecCCCceEEEEECCC----CCEEEEEeCCCeEEEEeCCCCce-------------eeeccCccccccccccCCc
Q psy14440 378 IACYTLLNARQQVTCAEISED----VSILAVGFSESYIKLWSLVPQKL-------------KAMKSSDQLQDIEMECDDI 440 (711)
Q Consensus 378 ~~~~tl~~h~~~V~~l~fs~d----g~~LatG~~dg~I~vWdl~~~~~-------------~~~~~~~~~~~l~~~~~d~ 440 (711)
+.+..+.+|.+.|++++|+++ +.+||+|+.|++|+||++..... ..+..+.+...++.++.|+
T Consensus 23 ~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~ 102 (321)
T 3ow8_A 23 ILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDA 102 (321)
T ss_dssp EEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTS
T ss_pred heeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCC
Confidence 445567799999999999974 67999999999999999865432 2233445566778889999
Q ss_pred EEEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEE
Q psy14440 441 LVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASA 520 (711)
Q Consensus 441 ~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sg 520 (711)
.|++||..+++.+..+..|...+.+++|+|++++|++|+.||+|++|++.+++....+..|...|.+++|+|+|++|++|
T Consensus 103 ~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg 182 (321)
T 3ow8_A 103 HIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASG 182 (321)
T ss_dssp EEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEE
T ss_pred cEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCeEEEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCE
Q psy14440 521 GHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRF 600 (711)
Q Consensus 521 s~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~ 600 (711)
+.||.|++||+++++.+..+.+|...|.+++|+|++++|++|+.||+|++||+++++.+..+.+|...|.+++|+|+|++
T Consensus 183 ~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 262 (321)
T 3ow8_A 183 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTH 262 (321)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSE
T ss_pred cCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCC
Q psy14440 601 LASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFA 658 (711)
Q Consensus 601 Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~ 658 (711)
|++|+.||+|+|||+.+++++..+.+|.+.|++++|+++|++|++++.||+|+|||+.
T Consensus 263 l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 263 FVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999963
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=4.2e-42 Score=368.58 Aligned_cols=279 Identities=24% Similarity=0.379 Sum_probs=256.8
Q ss_pred ceEEEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCc-----------eeeeccCccccccccccCCcEEEEE
Q psy14440 377 SIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK-----------LKAMKSSDQLQDIEMECDDILVRIM 445 (711)
Q Consensus 377 s~~~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~-----------~~~~~~~~~~~~l~~~~~d~~i~i~ 445 (711)
..+..++.+|.+.|++++|++|+++||+|+.||.|+|||+.+.+ +..+.++++...++.++.++.+++|
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw 124 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred chhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 34567899999999999999999999999999999999987654 2334456677788899999999999
Q ss_pred ecCCC----eeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEE
Q psy14440 446 DERNA----ETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAG 521 (711)
Q Consensus 446 d~~~~----~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs 521 (711)
+..+. .....+.+|.+.|.++.|++++. +++++.|++|++||+.+++.+..+.+|...|++++|+|++.+|++|+
T Consensus 125 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~ 203 (340)
T 1got_B 125 NLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGA 203 (340)
T ss_dssp ETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred ECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEe
Confidence 98764 45678889999999999998775 89999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeC--CCCCeEEEEEecCCC
Q psy14440 522 HDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTG--HKAPVYALSFSVCGR 599 (711)
Q Consensus 522 ~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~--h~~~I~~la~spdg~ 599 (711)
.|++|++||++++..+..+.+|...|.+++|+|++++|++|+.||+|++||+++++.+..+.. +...|++++|+|+|+
T Consensus 204 ~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 283 (340)
T 1got_B 204 CDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGR 283 (340)
T ss_dssp TTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSS
T ss_pred CCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCC
Confidence 999999999999999999999999999999999999999999999999999999988877753 335799999999999
Q ss_pred EEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEe
Q psy14440 600 FLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWD 656 (711)
Q Consensus 600 ~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWd 656 (711)
+|++|+.||.|++||+.+++.+..+.+|.+.|.+++|+++|.+|++|+.||+|+|||
T Consensus 284 ~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 284 LLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 999999999999999999999999999999999999999999999999999999997
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.7e-42 Score=362.25 Aligned_cols=276 Identities=20% Similarity=0.331 Sum_probs=249.7
Q ss_pred EEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecc
Q psy14440 380 CYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGH 459 (711)
Q Consensus 380 ~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h 459 (711)
..++.+|.+.|++++|+||+++||+|+.||.|+|||+. ++...+.+.+|
T Consensus 6 ~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~-------------------------------~~~~~~~~~~~ 54 (304)
T 2ynn_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYE-------------------------------TQVEVRSIQVT 54 (304)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETT-------------------------------TTEEEEEEECC
T ss_pred EEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECC-------------------------------CCceeEEeecc
Confidence 45789999999999999999999999999999999984 34456778889
Q ss_pred cCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCC-ceeE
Q psy14440 460 EGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSY-HPLR 538 (711)
Q Consensus 460 ~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~-~~~~ 538 (711)
..+|.+++|++++++|++|+.|++|++||+.+++++..+.+|...|++++|+|++.+|++|+.||+|++||++++ ....
T Consensus 55 ~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~ 134 (304)
T 2ynn_A 55 ETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQ 134 (304)
T ss_dssp SSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEE
T ss_pred CCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999877 4556
Q ss_pred EeecCCCCeeEEEEcC-CCCEEEEEEcCCcEEEEECCCCcEEEEee-CCCCCeEEEEEec--CCCEEEEEeCCCcEEEEE
Q psy14440 539 LFVGHYSDVDCVQFHP-NSNYVATGSSDRTIRLWDCVTGSHVRLLT-GHKAPVYALSFSV--CGRFLASAGGDGNVHMWD 614 (711)
Q Consensus 539 ~~~~h~~~V~~v~~sp-~~~~latgs~Dg~I~iwD~~~~~~v~~~~-~h~~~I~~la~sp--dg~~Lasgs~Dg~I~iwD 614 (711)
.+.+|...|.+++|+| ++.+|++|+.|++|++||++++.....+. +|...+..++|++ ++.+|++|+.||+|++||
T Consensus 135 ~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd 214 (304)
T 2ynn_A 135 TFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWD 214 (304)
T ss_dssp EECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEE
T ss_pred hhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEe
Confidence 7889999999999999 67899999999999999998887665554 5668899999987 788999999999999999
Q ss_pred CCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCCccCccccccccccccccccccceeeecccCCc
Q psy14440 615 LSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKAS 694 (711)
Q Consensus 615 l~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~ 694 (711)
+++++++..+.+|...|.+++|+|++.+|++|+.||+|+|||+.+. .++.++..+..
T Consensus 215 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~-----------------------~~~~~~~~~~~ 271 (304)
T 2ynn_A 215 YQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY-----------------------KVEKTLNVGLE 271 (304)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC-----------------------CEEEEECCSSS
T ss_pred CCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCC-----------------------ceeeeccCCCc
Confidence 9999999999999999999999999999999999999999998652 34456777788
Q ss_pred ceEEEEEccCCe--eee
Q psy14440 695 PLLHLIFSRRNI--LLR 709 (711)
Q Consensus 695 pV~~v~Fs~~n~--lla 709 (711)
.|.+++|++++. ++|
T Consensus 272 ~~~~~~~~~~~~~~~~a 288 (304)
T 2ynn_A 272 RSWCIATHPTGRKNYIA 288 (304)
T ss_dssp SEEEEEECTTCGGGCEE
T ss_pred cEEEEEECCCCCceEEE
Confidence 999999988764 455
No 5
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2e-41 Score=365.77 Aligned_cols=280 Identities=24% Similarity=0.385 Sum_probs=256.7
Q ss_pred ceEEEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCce-----------eeeccCccccccccccCCcEEEEE
Q psy14440 377 SIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKL-----------KAMKSSDQLQDIEMECDDILVRIM 445 (711)
Q Consensus 377 s~~~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~-----------~~~~~~~~~~~l~~~~~d~~i~i~ 445 (711)
.....++.+|.+.|+|++|++|+++||+|+.||+|+|||..+.+. ..+.++++...++.++.++.+++|
T Consensus 54 ~~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~ 133 (354)
T 2pbi_B 54 MKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVY 133 (354)
T ss_dssp CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEE
T ss_pred cEEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEE
Confidence 345678999999999999999999999999999999999866542 334566777888999999999999
Q ss_pred ecCCC------eeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcC--CCCEE
Q psy14440 446 DERNA------ETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSP--HGYYF 517 (711)
Q Consensus 446 d~~~~------~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp--~g~~l 517 (711)
+.... .....+.+|.+.|.+++|++++..|++|+.|++|++||+.+++++..+.+|...|.+++|++ +|++|
T Consensus 134 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l 213 (354)
T 2pbi_B 134 PLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTF 213 (354)
T ss_dssp ECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEE
T ss_pred EEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEE
Confidence 86532 34567789999999999999999999999999999999999999999999999999999987 57899
Q ss_pred EEEECCCeEEEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCC--CCCeEEEEEe
Q psy14440 518 ASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH--KAPVYALSFS 595 (711)
Q Consensus 518 ~sgs~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h--~~~I~~la~s 595 (711)
++|+.||+|++||+++++.+..+.+|...|.+++|+|++++|++|+.|++|++||+++++.+..+..+ ...+++++|+
T Consensus 214 ~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s 293 (354)
T 2pbi_B 214 VSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFS 293 (354)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEEC
T ss_pred EEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999888777644 3578999999
Q ss_pred cCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEe
Q psy14440 596 VCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWD 656 (711)
Q Consensus 596 pdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWd 656 (711)
++|++|++|+.||.|++||+.+++.+..+.+|.+.|++++|+|+|++|++|+.||+|+||+
T Consensus 294 ~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 294 LSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 9999999999999999999999999999999999999999999999999999999999996
No 6
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.6e-41 Score=363.91 Aligned_cols=272 Identities=24% Similarity=0.248 Sum_probs=234.6
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCC----------------------CceeeeccCccccccccccCCcEE
Q psy14440 385 NARQQVTCAEISEDVSILAVGFSESYIKLWSLVP----------------------QKLKAMKSSDQLQDIEMECDDILV 442 (711)
Q Consensus 385 ~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~----------------------~~~~~~~~~~~~~~l~~~~~d~~i 442 (711)
.|...|.+++|++||++|++|+ |+++++|+... ..+..+.++.+ ..++.++.++.|
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d-~~l~~~s~dg~v 105 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGE-RGILVASDSGAV 105 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETT-TEEEEEETTSEE
T ss_pred cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCC-CeEEEEECCCEE
Confidence 4667899999999999999887 66788886311 01223444444 457788999999
Q ss_pred EEEecCCCeeEE----EeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCC-CEE
Q psy14440 443 RIMDERNAETTR----TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG-YYF 517 (711)
Q Consensus 443 ~i~d~~~~~~~~----~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g-~~l 517 (711)
++||..+++... .+.+|.+.|++++|+++|++|++|+.||+|++||+.+++++..+.+|...|++++|++++ .+|
T Consensus 106 ~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l 185 (344)
T 4gqb_B 106 ELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVF 185 (344)
T ss_dssp EEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEE
T ss_pred EEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCce
Confidence 999998876543 345899999999999999999999999999999999999999999999999999999987 588
Q ss_pred EEEECCCeEEEEECCCCceeEEee--cCCCCeeEEEEcC-CCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEE
Q psy14440 518 ASAGHDRMARLWATDSYHPLRLFV--GHYSDVDCVQFHP-NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSF 594 (711)
Q Consensus 518 ~sgs~Dg~i~lwd~~~~~~~~~~~--~h~~~V~~v~~sp-~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~ 594 (711)
++|+.|++|++||+++++....+. .|...+.+++|+| ++++|++|+.||+|++||++++++++.+.+|...|++++|
T Consensus 186 ~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~f 265 (344)
T 4gqb_B 186 LSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVF 265 (344)
T ss_dssp EEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEE
T ss_pred eeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 999999999999999999888764 4566799999999 5678999999999999999999999999999999999999
Q ss_pred ecCC-CEEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCC-EEEEEeCCCcEEEEeCCC
Q psy14440 595 SVCG-RFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGN-ILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 595 spdg-~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~-~Lasgs~Dg~V~iWdl~~ 659 (711)
+|+| ++|++|+.||+|+|||+.+++++ .+.+|.+.|++++|+|++. +|++||.||+|++|++..
T Consensus 266 sp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 266 SPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp CSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred ccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 9998 58999999999999999998865 5789999999999999886 678999999999999975
No 7
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1e-40 Score=386.74 Aligned_cols=277 Identities=22% Similarity=0.347 Sum_probs=236.6
Q ss_pred EEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCc-------------eeeeccCccccccccccCC----cEE
Q psy14440 380 CYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK-------------LKAMKSSDQLQDIEMECDD----ILV 442 (711)
Q Consensus 380 ~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~-------------~~~~~~~~~~~~l~~~~~d----~~i 442 (711)
..++.+|.+.|++++|||||++||+|+.||+|+|||+.+.. +..+.++++...++.++.+ +.+
T Consensus 52 ~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v 131 (611)
T 1nr0_A 52 TEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHV 131 (611)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEE
T ss_pred CeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEE
Confidence 45678999999999999999999999999999999985321 3345566666667665543 578
Q ss_pred EEEecCCCeeEEEeecccCCEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEE
Q psy14440 443 RIMDERNAETTRTLVGHEGPVRKLSFSPDRS-LLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAG 521 (711)
Q Consensus 443 ~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~-~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs 521 (711)
++|| .+.....+.+|.+.|++++|+|++. .|++|+.|++|++||..++++...+.+|...|++++|+|+|++|++|+
T Consensus 132 ~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s 209 (611)
T 1nr0_A 132 FLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTG 209 (611)
T ss_dssp EETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEE
Confidence 8887 4556678899999999999999987 599999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEECCCCceeEEee-------cCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEE-------------
Q psy14440 522 HDRMARLWATDSYHPLRLFV-------GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRL------------- 581 (711)
Q Consensus 522 ~Dg~i~lwd~~~~~~~~~~~-------~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~------------- 581 (711)
.|++|++||..+++.+..+. +|...|.+++|+|++++|++|+.|++|++||+.+++++..
T Consensus 210 ~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~ 289 (611)
T 1nr0_A 210 GDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLG 289 (611)
T ss_dssp TTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEE
T ss_pred CCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEE
Confidence 99999999999999888874 7999999999999999999999999999999998765543
Q ss_pred ------------------------------eeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEe-eCCCCC
Q psy14440 582 ------------------------------LTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLL-TGHTDV 630 (711)
Q Consensus 582 ------------------------------~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l-~~h~~~ 630 (711)
+.+|...|++++|+|+|++|++|+.||+|++||+.+++....+ .+|...
T Consensus 290 ~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~ 369 (611)
T 1nr0_A 290 IIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATM 369 (611)
T ss_dssp EEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSC
T ss_pred EEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcce
Confidence 3579999999999999999999999999999999998876655 457777
Q ss_pred EEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 631 VRALCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 631 V~sl~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
|.+++|++++ .|++++.|++|++|++..
T Consensus 370 v~~~~~s~~~-~l~s~s~d~~v~~w~~~~ 397 (611)
T 1nr0_A 370 ITGIKTTSKG-DLFTVSWDDHLKVVPAGG 397 (611)
T ss_dssp EEEEEECTTS-CEEEEETTTEEEEECSSS
T ss_pred EEEEEECCCC-cEEEEEcCCceEEeecCC
Confidence 7777777544 456666777777776543
No 8
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.3e-41 Score=368.60 Aligned_cols=285 Identities=24% Similarity=0.441 Sum_probs=255.5
Q ss_pred CceEEEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCce-----------eeeccCccccccccccCCcEEEE
Q psy14440 376 PSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKL-----------KAMKSSDQLQDIEMECDDILVRI 444 (711)
Q Consensus 376 ps~~~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~-----------~~~~~~~~~~~l~~~~~d~~i~i 444 (711)
...+..++.+|.+.|+|++|+|++++||+|+.||+|+|||+.+.+. ..+.++++...++.++.|+.+++
T Consensus 55 ~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~i 134 (380)
T 3iz6_a 55 DLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSI 134 (380)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEE
T ss_pred eeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEE
Confidence 3567889999999999999999999999999999999999876542 23445667788899999999999
Q ss_pred EecCCC-------eeEEEeecccCCEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCeEEEEE-----ecCCCCEEEEEEc
Q psy14440 445 MDERNA-------ETTRTLVGHEGPVRKLSFSPDR-SLLLSCSQDNTIRLWSLLLWRCLVVY-----KGHGHPVWDIKFS 511 (711)
Q Consensus 445 ~d~~~~-------~~~~~l~~h~~~V~~l~fspdg-~~L~s~s~Dg~V~iwdl~t~~~~~~~-----~~h~~~V~~v~~s 511 (711)
|+..+. .....+.+|.+.|.++.|++++ ..|++|+.|++|++||+.+++.+..+ .+|...|.+++|+
T Consensus 135 w~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 214 (380)
T 3iz6_a 135 FNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSIN 214 (380)
T ss_dssp EECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEEC
T ss_pred EECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEee
Confidence 997543 2345688999999999999974 57999999999999999999999888 6799999999998
Q ss_pred C-CCCEEEEEECCCeEEEEECC-CCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCC---
Q psy14440 512 P-HGYYFASAGHDRMARLWATD-SYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHK--- 586 (711)
Q Consensus 512 p-~g~~l~sgs~Dg~i~lwd~~-~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~--- 586 (711)
+ ++++|++|+.|++|++||++ ....+..+.+|...|.+++|+|++++|++|+.||+|++||+++++++..+..+.
T Consensus 215 ~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~ 294 (380)
T 3iz6_a 215 SLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRN 294 (380)
T ss_dssp SSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSS
T ss_pred cCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccccc
Confidence 7 88999999999999999998 557888999999999999999999999999999999999999999998886543
Q ss_pred ----CCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEe----eCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCC
Q psy14440 587 ----APVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLL----TGHTDVVRALCFSRDGNILASSGQDCSVKLWDFA 658 (711)
Q Consensus 587 ----~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l----~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~ 658 (711)
..|++++|+++|++|++|+.||.|++||+.+++.+..+ .+|.+.|++++|+++|++|++||.||+|+||++.
T Consensus 295 ~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 295 DNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFS 374 (380)
T ss_dssp CCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECC
T ss_pred ccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecC
Confidence 24899999999999999999999999999999988877 6899999999999999999999999999999987
Q ss_pred CC
Q psy14440 659 KL 660 (711)
Q Consensus 659 ~~ 660 (711)
..
T Consensus 375 ~~ 376 (380)
T 3iz6_a 375 GH 376 (380)
T ss_dssp SS
T ss_pred CC
Confidence 53
No 9
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4.9e-40 Score=359.84 Aligned_cols=278 Identities=27% Similarity=0.483 Sum_probs=251.1
Q ss_pred EEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCc-----------------------------eeeeccCccc
Q psy14440 380 CYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK-----------------------------LKAMKSSDQL 430 (711)
Q Consensus 380 ~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~-----------------------------~~~~~~~~~~ 430 (711)
+....+|.+.|+|++|||||++||+|+ ++.|+||++.+++ +..+.++.+.
T Consensus 57 ~~~~~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg 135 (393)
T 1erj_A 57 LHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDG 135 (393)
T ss_dssp EEEEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTS
T ss_pred eEEecCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCC
Confidence 444567999999999999999999987 6889999986643 2344556677
Q ss_pred cccccccCCcEEEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEE
Q psy14440 431 QDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKF 510 (711)
Q Consensus 431 ~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~ 510 (711)
..++.++.|+.|++||..+++....+.+|.+.|++++|++++++|++|+.|++|++||+.++++...+. +...+.+++|
T Consensus 136 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~ 214 (393)
T 1erj_A 136 KFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAV 214 (393)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEE
Confidence 788889999999999999999999999999999999999999999999999999999999999888876 5678999999
Q ss_pred cC-CCCEEEEEECCCeEEEEECCCCceeEEe-------ecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCC-------
Q psy14440 511 SP-HGYYFASAGHDRMARLWATDSYHPLRLF-------VGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT------- 575 (711)
Q Consensus 511 sp-~g~~l~sgs~Dg~i~lwd~~~~~~~~~~-------~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~------- 575 (711)
+| ++++|++|+.||+|++||++++..+..+ .+|...|.+++|+|++++|++|+.||+|++||+++
T Consensus 215 ~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~ 294 (393)
T 1erj_A 215 SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDS 294 (393)
T ss_dssp CSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccc
Confidence 99 8999999999999999999998887766 57999999999999999999999999999999975
Q ss_pred -----CcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeC------CCCEEE
Q psy14440 576 -----GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSR------DGNILA 644 (711)
Q Consensus 576 -----~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fsp------dg~~La 644 (711)
+.+...+.+|...|.+++|++++++|++|+.||.|++||+.+++.+..+.+|.+.|.+++|++ ++++|+
T Consensus 295 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~ 374 (393)
T 1erj_A 295 KTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFA 374 (393)
T ss_dssp ------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEE
T ss_pred cCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEE
Confidence 345677889999999999999999999999999999999999999999999999999999986 688999
Q ss_pred EEeCCCcEEEEeCCC
Q psy14440 645 SSGQDCSVKLWDFAK 659 (711)
Q Consensus 645 sgs~Dg~V~iWdl~~ 659 (711)
+|+.||+|+||++..
T Consensus 375 sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 375 TGSGDCKARIWKYKK 389 (393)
T ss_dssp EEETTSEEEEEEEEE
T ss_pred EECCCCcEEECcccc
Confidence 999999999999865
No 10
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=8.4e-40 Score=351.55 Aligned_cols=290 Identities=21% Similarity=0.348 Sum_probs=244.5
Q ss_pred eEEEEEecCCC-ceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEe
Q psy14440 378 IACYTLLNARQ-QVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTL 456 (711)
Q Consensus 378 ~~~~tl~~h~~-~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l 456 (711)
.++.++.+|.+ .|++++|+|||++||+|+.|+.|+||++.+.... ......
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~----------------------------~~~~~~ 57 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWI----------------------------CKSVLS 57 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEE----------------------------EEEEEC
T ss_pred EEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcce----------------------------eeeeec
Confidence 35678889988 9999999999999999999999999997543211 011223
Q ss_pred ecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--eEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCC
Q psy14440 457 VGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLW--RCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSY 534 (711)
Q Consensus 457 ~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~--~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~ 534 (711)
.+|.+.|.+++|+|++++|++|+.|++|++|++.+. +++..+.+|...|++++|+|++++|++|+.|++|++||++++
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~ 137 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEE 137 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTT
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCC
Confidence 589999999999999999999999999999999766 567889999999999999999999999999999999999876
Q ss_pred c---eeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCc--EEEEeeCCCCCeEEEEEecCCCEEEEEeCCCc
Q psy14440 535 H---PLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGS--HVRLLTGHKAPVYALSFSVCGRFLASAGGDGN 609 (711)
Q Consensus 535 ~---~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~--~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~ 609 (711)
. .+..+.+|...|.+++|+|++++|++|+.|++|++||+.+++ +...+.+|...|++++|+|+|++|++|+.||+
T Consensus 138 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~ 217 (345)
T 3fm0_A 138 DEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRT 217 (345)
T ss_dssp SCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCe
Confidence 4 456778999999999999999999999999999999998875 45788899999999999999999999999999
Q ss_pred EEEEECCC---------------CeEEEEeeC-CCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCCccCcccccccc
Q psy14440 610 VHMWDLSN---------------GHLLTLLTG-HTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSH 673 (711)
Q Consensus 610 I~iwDl~s---------------g~~i~~l~~-h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~~~~~ 673 (711)
|+|||... .+++..+.+ |...|++++|++++..|++++.|+.|++|++.........
T Consensus 218 v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~------- 290 (345)
T 3fm0_A 218 VRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQP------- 290 (345)
T ss_dssp EEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSC-------
T ss_pred EEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCccee-------
Confidence 99999632 234555655 8889999999999999999999999999998753321110
Q ss_pred ccccccccccceeeecccCCcceEEEEEccCCe-eee
Q psy14440 674 SADIKNSSLAYLVRSYKTKASPLLHLIFSRRNI-LLR 709 (711)
Q Consensus 674 ~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~-lla 709 (711)
........+..|...|.+|+|++++. +||
T Consensus 291 -------~~~~~~~~~~~h~~~V~~v~~~p~~~~~la 320 (345)
T 3fm0_A 291 -------TFSLTAHLHQAHSQDVNCVAWNPKEPGLLA 320 (345)
T ss_dssp -------CEEEEEEETTSSSSCEEEEEECSSSTTEEE
T ss_pred -------eEEEEeeecccccCcEeEeEEeCCCceEEE
Confidence 01122234567889999999999873 676
No 11
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.7e-40 Score=359.00 Aligned_cols=275 Identities=20% Similarity=0.243 Sum_probs=234.3
Q ss_pred ecCCCceEEEEECCCCCEEEEEeC------CCeEEEEeCCCCc---------------eeeeccCccccccccccCCcEE
Q psy14440 384 LNARQQVTCAEISEDVSILAVGFS------ESYIKLWSLVPQK---------------LKAMKSSDQLQDIEMECDDILV 442 (711)
Q Consensus 384 ~~h~~~V~~l~fs~dg~~LatG~~------dg~I~vWdl~~~~---------------~~~~~~~~~~~~l~~~~~d~~i 442 (711)
..|...|++++|||||++||+|+. |+.|++|+..+.. +..+.++++. .+++++.++.|
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~-~~l~~s~dg~v 117 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEK-GILVASDSGAV 117 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTT-EEEEEETTSCE
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCC-CEEEEECCCEE
Confidence 468999999999999999999998 7789999875432 2233444443 35567789999
Q ss_pred EEEecCCCeeE----EEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCC-EE
Q psy14440 443 RIMDERNAETT----RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGY-YF 517 (711)
Q Consensus 443 ~i~d~~~~~~~----~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~-~l 517 (711)
++||..+++.. ....+|.+.|++++|+|++++|++|+.||+|++||+.+++++..+.+|...|++++|++++. ++
T Consensus 118 ~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~ 197 (357)
T 4g56_B 118 ELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIF 197 (357)
T ss_dssp EEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCE
T ss_pred EEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCcee
Confidence 99998776643 34558999999999999999999999999999999999999999999999999999999874 89
Q ss_pred EEEECCCeEEEEECCCCceeEEee--cCCCCeeEEEEcCC-CCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEE
Q psy14440 518 ASAGHDRMARLWATDSYHPLRLFV--GHYSDVDCVQFHPN-SNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSF 594 (711)
Q Consensus 518 ~sgs~Dg~i~lwd~~~~~~~~~~~--~h~~~V~~v~~sp~-~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~ 594 (711)
++++.||+|++||+++++.+..+. .|...+.+++|+|+ +.+|++|+.|+.|++||++++++++.+.+|...|++++|
T Consensus 198 ~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~ 277 (357)
T 4g56_B 198 LSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAY 277 (357)
T ss_dssp EEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEE
T ss_pred eeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEE
Confidence 999999999999999988776554 46778999999996 578999999999999999999999999999999999999
Q ss_pred ecCC-CEEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeC-CCCEEEEEeCCCcEEEEeCCCC
Q psy14440 595 SVCG-RFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSR-DGNILASSGQDCSVKLWDFAKL 660 (711)
Q Consensus 595 spdg-~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fsp-dg~~Lasgs~Dg~V~iWdl~~~ 660 (711)
+|++ ++|++|+.||+|+|||+.+++++..+ +|.+.|++++|+| ++++|++||.||+|++||+...
T Consensus 278 sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 278 SYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp CSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred cCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 9987 58999999999999999999887655 7999999999998 8999999999999999999764
No 12
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3e-39 Score=340.75 Aligned_cols=281 Identities=29% Similarity=0.520 Sum_probs=255.8
Q ss_pred eEEEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCce-----------eeeccCccccccccccCCcEEEEEe
Q psy14440 378 IACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKL-----------KAMKSSDQLQDIEMECDDILVRIMD 446 (711)
Q Consensus 378 ~~~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~-----------~~~~~~~~~~~l~~~~~d~~i~i~d 446 (711)
...+++.+|.+.|++++|++++++||+|+.||.|++|++.+.+. ..+.++.+...++.++.++.+++||
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd 93 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD 93 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred eeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEE
Confidence 34567899999999999999999999999999999999866543 3345566777888999999999999
Q ss_pred cCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeE
Q psy14440 447 ERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMA 526 (711)
Q Consensus 447 ~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i 526 (711)
..+++....+.+|.+.|.+++|++++++|++|+.||+|++||+.+++++..+..|...|.+++|++++.+|++|+.||.|
T Consensus 94 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 173 (312)
T 4ery_A 94 VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 173 (312)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEECCCCceeEEee-cCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEE--EE-ecCCCEEE
Q psy14440 527 RLWATDSYHPLRLFV-GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYAL--SF-SVCGRFLA 602 (711)
Q Consensus 527 ~lwd~~~~~~~~~~~-~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~l--a~-spdg~~La 602 (711)
++||+++++.+..+. .+...+.+++|+|++++|++++.||.|++||+++++++..+.+|...+.++ .+ .+++.+|+
T Consensus 174 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 253 (312)
T 4ery_A 174 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 253 (312)
T ss_dssp EEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEE
T ss_pred EEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEE
Confidence 999999998877664 466789999999999999999999999999999999999999887654332 33 36789999
Q ss_pred EEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEe--CCCcEEEEeCC
Q psy14440 603 SAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSG--QDCSVKLWDFA 658 (711)
Q Consensus 603 sgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs--~Dg~V~iWdl~ 658 (711)
+|+.||.|++||+.+++.+..+.+|.+.|.+++|+|++++|++++ .||+|++|+..
T Consensus 254 sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 254 SGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp ECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred EECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 999999999999999999999999999999999999999999997 69999999964
No 13
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=4.4e-39 Score=342.08 Aligned_cols=278 Identities=23% Similarity=0.385 Sum_probs=250.0
Q ss_pred EEEEEecCCCceEEEEECCCC-CEEEEEeCCCeEEEEeCCCC----------------ceeeeccCccccccccccCCcE
Q psy14440 379 ACYTLLNARQQVTCAEISEDV-SILAVGFSESYIKLWSLVPQ----------------KLKAMKSSDQLQDIEMECDDIL 441 (711)
Q Consensus 379 ~~~tl~~h~~~V~~l~fs~dg-~~LatG~~dg~I~vWdl~~~----------------~~~~~~~~~~~~~l~~~~~d~~ 441 (711)
...++.+|.+.|++++|++++ ++|++|+.|++|++|++.+. .+..+..+.+...++.++.|+.
T Consensus 9 l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~ 88 (319)
T 3frx_A 9 LRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKT 88 (319)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCE
Confidence 455789999999999999965 89999999999999997532 1233455667778889999999
Q ss_pred EEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCC------CC
Q psy14440 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH------GY 515 (711)
Q Consensus 442 i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~------g~ 515 (711)
|++||..+++....+.+|.+.|.+++|++++.+|++|+.|++|++||+. +.++..+.+|...|.++.|+|. +.
T Consensus 89 v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 167 (319)
T 3frx_A 89 LRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSV 167 (319)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CC
T ss_pred EEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCcc
Confidence 9999999999999999999999999999999999999999999999996 5678888999999999999984 45
Q ss_pred EEEEEECCCeEEEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEe
Q psy14440 516 YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFS 595 (711)
Q Consensus 516 ~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~s 595 (711)
++++++.|++|++||+++.+....+.+|...|.+++|+|++++|++|+.||+|++||+.+++.+..+.. ...|.+++|+
T Consensus 168 ~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~s 246 (319)
T 3frx_A 168 TIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA-QDEVFSLAFS 246 (319)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC-CSCEEEEEEC
T ss_pred EEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-CCcEEEEEEc
Confidence 899999999999999999999999999999999999999999999999999999999999999998885 4689999999
Q ss_pred cCCCEEEEEeCCCcEEEEECCCCeEEEEeeC--------CCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 596 VCGRFLASAGGDGNVHMWDLSNGHLLTLLTG--------HTDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 596 pdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~--------h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
|+|.+|++++.+ .|++|++..+..+..+.. |...+.+++|+|||++|++|+.||+|+|||+.+
T Consensus 247 p~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 247 PNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp SSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred CCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEee
Confidence 999999988765 599999998888777653 456799999999999999999999999999864
No 14
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.3e-39 Score=377.50 Aligned_cols=305 Identities=21% Similarity=0.304 Sum_probs=259.5
Q ss_pred EEecCCCceEEEEECCCCC-EEEEEeCCCeEEEEeCCCCc-----------eeeeccCccccccccccCCcEEEEEecCC
Q psy14440 382 TLLNARQQVTCAEISEDVS-ILAVGFSESYIKLWSLVPQK-----------LKAMKSSDQLQDIEMECDDILVRIMDERN 449 (711)
Q Consensus 382 tl~~h~~~V~~l~fs~dg~-~LatG~~dg~I~vWdl~~~~-----------~~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 449 (711)
++.+|.+.|++++|+|++. .||+|+.|++|++|+..+.+ +..+.++++...++.++.|+.|++||..+
T Consensus 142 ~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~ 221 (611)
T 1nr0_A 142 NLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD 221 (611)
T ss_dssp CCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred eecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCC
Confidence 5678999999999999997 69999999999999986543 34566677788899999999999999999
Q ss_pred CeeEEEee-------cccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEE--------------------------
Q psy14440 450 AETTRTLV-------GHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLV-------------------------- 496 (711)
Q Consensus 450 ~~~~~~l~-------~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~-------------------------- 496 (711)
++....+. +|.+.|++++|+|++++|++|+.|++|++||+.+++++.
T Consensus 222 g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s 301 (611)
T 1nr0_A 222 GTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSIS 301 (611)
T ss_dssp CCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEE
T ss_pred CcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEe
Confidence 98888884 899999999999999999999999999999998876554
Q ss_pred -----------------EEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEe-e-----------------
Q psy14440 497 -----------------VYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLF-V----------------- 541 (711)
Q Consensus 497 -----------------~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~-~----------------- 541 (711)
.+.+|...|++++|+|+|++|++++.|++|++||+.++...+.+ .
T Consensus 302 ~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l 381 (611)
T 1nr0_A 302 ANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDL 381 (611)
T ss_dssp TTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCE
T ss_pred CCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcE
Confidence 34578999999999999999999999999999998876443221 0
Q ss_pred ----------------------------------------------------------------cCCCCeeEEEEcCCCC
Q psy14440 542 ----------------------------------------------------------------GHYSDVDCVQFHPNSN 557 (711)
Q Consensus 542 ----------------------------------------------------------------~h~~~V~~v~~sp~~~ 557 (711)
.|...+.+++|+|+|+
T Consensus 382 ~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~ 461 (611)
T 1nr0_A 382 FTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQ 461 (611)
T ss_dssp EEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSC
T ss_pred EEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCC
Confidence 1234577899999999
Q ss_pred EEEEEEcCCcEEEEECCCCcE--EEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC-CeEEEE--eeCCCCCEE
Q psy14440 558 YVATGSSDRTIRLWDCVTGSH--VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN-GHLLTL--LTGHTDVVR 632 (711)
Q Consensus 558 ~latgs~Dg~I~iwD~~~~~~--v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~s-g~~i~~--l~~h~~~V~ 632 (711)
+||+|+.|++|++||+.++.. +.. .+|...|++++|+|||++|++++.|++|++||+.+ ++.+.. +.+|.+.|+
T Consensus 462 ~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~ 540 (611)
T 1nr0_A 462 FVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVA 540 (611)
T ss_dssp EEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEE
T ss_pred EEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeeccccee
Confidence 999999999999999987653 334 67999999999999999999999999999999987 666543 345999999
Q ss_pred EEEEeCCCCEEEEEeCCCcEEEEeCCCCCCccCccccccccccccccccccceeeecccC-CcceEEEEEccCCeeee
Q psy14440 633 ALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTK-ASPLLHLIFSRRNILLR 709 (711)
Q Consensus 633 sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~-~~pV~~v~Fs~~n~lla 709 (711)
+++|+|||++|++|+.|++|+|||+..... ..+..+..| ...|.+|+|++++. |+
T Consensus 541 ~v~fspdg~~lasgs~D~~v~lW~~~~~~~---------------------~~~~~~~~h~~~~v~~v~fs~d~~-l~ 596 (611)
T 1nr0_A 541 CVSWSPDNVRLATGSLDNSVIVWNMNKPSD---------------------HPIIIKGAHAMSSVNSVIWLNETT-IV 596 (611)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTCTTS---------------------CCEEETTSSTTSCEEEEEEEETTE-EE
T ss_pred EEEECCCCCEEEEEECCCcEEEEECCCccc---------------------ccchhhccCcccCeeEEEEcCCCE-EE
Confidence 999999999999999999999999975321 112345667 78999999999998 54
No 15
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=6.1e-39 Score=366.85 Aligned_cols=303 Identities=33% Similarity=0.524 Sum_probs=274.1
Q ss_pred eEEEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCce----------eeeccCccccccccccCCcEEEEEec
Q psy14440 378 IACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKL----------KAMKSSDQLQDIEMECDDILVRIMDE 447 (711)
Q Consensus 378 ~~~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~----------~~~~~~~~~~~l~~~~~d~~i~i~d~ 447 (711)
-++.++.+|...|++++|++|+++|++|+.|+.|++|+..+..+ ..+..+++...++.++.++.+++||.
T Consensus 253 ~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~ 332 (577)
T 2ymu_A 253 QLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR 332 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 35567889999999999999999999999999999999865433 33445566777888899999999996
Q ss_pred CCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEE
Q psy14440 448 RNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMAR 527 (711)
Q Consensus 448 ~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~ 527 (711)
. ......+.+|...|.+++|+|++++|++++.||+|++||. +++.+..+.+|...|.+++|+|+|++|++++.|+.|+
T Consensus 333 ~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~ 410 (577)
T 2ymu_A 333 N-GQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVK 410 (577)
T ss_dssp T-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred C-CCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEE
Confidence 5 4556788899999999999999999999999999999995 5788889999999999999999999999999999999
Q ss_pred EEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCC
Q psy14440 528 LWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGD 607 (711)
Q Consensus 528 lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~D 607 (711)
+||. +++.+..+.+|...|.+++|+|++++|++++.|++|++||. +++.+..+.+|...|++++|+|+|++|++++.|
T Consensus 411 ~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d 488 (577)
T 2ymu_A 411 LWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDD 488 (577)
T ss_dssp EECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETT
T ss_pred EEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCC
Confidence 9995 56788889999999999999999999999999999999996 678889999999999999999999999999999
Q ss_pred CcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCCccCccccccccccccccccccceee
Q psy14440 608 GNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVR 687 (711)
Q Consensus 608 g~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 687 (711)
+.|++||. +++.+..+.+|.+.|++++|+|+|++|++|+.||+|+|||+. ..++.
T Consensus 489 ~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~------------------------~~~~~ 543 (577)
T 2ymu_A 489 KTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN------------------------GQLLQ 543 (577)
T ss_dssp SEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT------------------------SCEEE
T ss_pred CEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC------------------------CCEEE
Confidence 99999995 789999999999999999999999999999999999999953 12456
Q ss_pred ecccCCcceEEEEEccCCeeee
Q psy14440 688 SYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 688 ~~~t~~~pV~~v~Fs~~n~lla 709 (711)
++..|..+|.+|+|++|+.+|+
T Consensus 544 ~~~~h~~~v~~~~fs~dg~~l~ 565 (577)
T 2ymu_A 544 TLTGHSSSVWGVAFSPDGQTIA 565 (577)
T ss_dssp EEECCSSCEEEEEECTTSSCEE
T ss_pred EEcCCCCCEEEEEEcCCCCEEE
Confidence 7888999999999999999887
No 16
>2nxp_A Transcription initiation factor TFIID subunit 5; transcription factor, TAF5; 2.17A {Homo sapiens} SCOP: d.379.1.1
Probab=100.00 E-value=2.8e-42 Score=324.18 Aligned_cols=152 Identities=49% Similarity=0.855 Sum_probs=146.5
Q ss_pred CCCCccccccccccccCCChhHHHHHHHHHHHHHhhhcccchhhhhhhhHHHHHHHHHHHHhCCChHHHHHHHHHhcCCC
Q psy14440 123 DPNDSEIGDLLSAYESEGDPNLYEDAYQDLKKFIENSLDVYKYELGLVLYPVLVHMYIELVYNGHEHQATEMLHKHLMDH 202 (711)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~ld~~k~el~~~l~p~f~~~yl~lv~~~~~~~a~~f~~~~~~~~ 202 (711)
+.+|+++++.+.++.+++||+.|+++|.+||+||++|||+||+||++||||||||+||+||++|+.++|++||+||+++|
T Consensus 5 ~~~e~~~~~~~~~~~~~~dp~~y~~~y~~L~~wv~~sld~yk~EL~~lLyPlFvh~yL~Lv~~g~~~~A~~F~~~f~~~~ 84 (156)
T 2nxp_A 5 VEDQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQ 84 (156)
T ss_dssp ---CCCHHHHHGGGSSCCCTTSHHHHHHHHHHHHHTSCHHHHHHHGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGS
T ss_pred ccCCchHHHHHHHhhccCCHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHhHHh
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHhcCCCcccccccHHHHHhhcCccEEEeCHHHHHHHHHHHhhcChhhHHHHhhcceEEEEcc
Q psy14440 203 EPHYQEDLRKLSSVTKRDQIRTNEIAETFRSTEFIIRMSRDTLSLLKRHLQEKKHTVLLNIVQEHLYFDMYE 274 (711)
Q Consensus 203 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~k~~v~~s~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~~~~ 274 (711)
+.+|+++|++|++|++++|+++|+++++||+|||+|+||++++++|++||+++++++|++|||+||+|++++
T Consensus 85 ~~~~~~~i~~L~~i~~~~~l~~n~~~~~fr~~Ky~I~ls~~s~~lL~~fL~~~~~~~ll~Iin~~i~i~v~~ 156 (156)
T 2nxp_A 85 ECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFD 156 (156)
T ss_dssp CGGGHHHHHHHHTCCSHHHHTTCGGGGGGCGGGSEEEEEHHHHHHHHHHHTTSTTCHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHHHhcCCCHHHHhhcHHHHHHHhCCeEEEECHHHHHHHHHHHHHcCChHHHHHHHHheeeeeeC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999863
No 17
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2e-39 Score=357.23 Aligned_cols=267 Identities=27% Similarity=0.485 Sum_probs=251.2
Q ss_pred ceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEe
Q psy14440 420 KLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYK 499 (711)
Q Consensus 420 ~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~ 499 (711)
.+..+.++++...++.++.|+.|++||..+++....+.+|.+.|++++|++++++|++|+.||+|++||+.+++++..+.
T Consensus 110 ~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~ 189 (410)
T 1vyh_C 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH 189 (410)
T ss_dssp CEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCC
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEc
Confidence 44555666777788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEE
Q psy14440 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHV 579 (711)
Q Consensus 500 ~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v 579 (711)
+|...|++++|+|++.+|++|+.|++|++||++++.++..+.+|...|.+++|++++.+|++|+.|++|++||+.++++.
T Consensus 190 ~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~ 269 (410)
T 1vyh_C 190 GHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269 (410)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred CCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeCCCCCeEEEEEecC--------------------CCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCC
Q psy14440 580 RLLTGHKAPVYALSFSVC--------------------GRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRD 639 (711)
Q Consensus 580 ~~~~~h~~~I~~la~spd--------------------g~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspd 639 (711)
..+.+|...|.+++|+|+ |.+|++|+.||.|++||+++++++..+.+|.+.|++++|+++
T Consensus 270 ~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~ 349 (410)
T 1vyh_C 270 AELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSG 349 (410)
T ss_dssp EEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSS
T ss_pred eEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCC
Confidence 999999999999999996 679999999999999999999999999999999999999999
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCCccCccccccccccccccccccceeeecccCCcceEEEEEccCCeeee
Q psy14440 640 GNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 640 g~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
|++|++|+.||+|++||+.+. .++..+..|...|.+|+|++++.+||
T Consensus 350 g~~l~s~s~D~~i~vwd~~~~-----------------------~~~~~~~~h~~~v~~l~~~~~~~~l~ 396 (410)
T 1vyh_C 350 GKFILSCADDKTLRVWDYKNK-----------------------RCMKTLNAHEHFVTSLDFHKTAPYVV 396 (410)
T ss_dssp SSCEEEEETTTEEEEECCTTS-----------------------CCCEEEECCSSCEEEEEECSSSSCEE
T ss_pred CCEEEEEeCCCeEEEEECCCC-----------------------ceEEEEcCCCCcEEEEEEcCCCCEEE
Confidence 999999999999999998642 23456778899999999999998887
No 18
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.8e-38 Score=340.53 Aligned_cols=294 Identities=22% Similarity=0.325 Sum_probs=239.8
Q ss_pred eEEEEEecCCCceEEEEE-----CC-CCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCe
Q psy14440 378 IACYTLLNARQQVTCAEI-----SE-DVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAE 451 (711)
Q Consensus 378 ~~~~tl~~h~~~V~~l~f-----s~-dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 451 (711)
.+..++.+|.+.|++++| ++ |+++||+|+.|++|+||++....... ..+.
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~------------------------~~~~ 67 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNG------------------------YFGI 67 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSS------------------------BSEE
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCccc------------------------cccc
Confidence 355678999999999999 76 99999999999999999986432110 1234
Q ss_pred eEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEEC
Q psy14440 452 TTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWAT 531 (711)
Q Consensus 452 ~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~ 531 (711)
....+.+|.+.|++++|++++.+|++|+.|++|++||+.+++.+..+.+|...|++++|+|++++|++|+.|++|++||+
T Consensus 68 ~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~ 147 (343)
T 2xzm_R 68 PHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNI 147 (343)
T ss_dssp EEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEES
T ss_pred ccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEec
Confidence 56678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeEEee---cCCCCeeEEEEcCCC----------CEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCC
Q psy14440 532 DSYHPLRLFV---GHYSDVDCVQFHPNS----------NYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCG 598 (711)
Q Consensus 532 ~~~~~~~~~~---~h~~~V~~v~~sp~~----------~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg 598 (711)
... ...... +|...|.+++|+|++ .+|++|+.||+|++|| .++.....+.+|...|++++|+|+|
T Consensus 148 ~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g 225 (343)
T 2xzm_R 148 LGE-CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNG 225 (343)
T ss_dssp SSC-EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTS
T ss_pred cCC-ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCC
Confidence 843 333333 688899999999986 7999999999999999 5667788899999999999999999
Q ss_pred CEEEEEeCCCcEEEEECCC-CeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCCccCcccccccccccc
Q psy14440 599 RFLASAGGDGNVHMWDLSN-GHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADI 677 (711)
Q Consensus 599 ~~Lasgs~Dg~I~iwDl~s-g~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~ 677 (711)
++|++|+.||.|++||+.+ +.....+. +...|.+++|+|++.+|++| .|+.|++||+.+....... .. ..
T Consensus 226 ~~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~-~~--~~---- 296 (343)
T 2xzm_R 226 KYIATGGKDKKLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVC-TI--EA---- 296 (343)
T ss_dssp SEEEEEETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEE-EC--CC----
T ss_pred CEEEEEcCCCeEEEEECCCCcccceeec-CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceE-Ee--ec----
Confidence 9999999999999999954 43444443 45679999999999888755 5889999999764321100 00 00
Q ss_pred ccccccceeeecccCCcceEEEEEccCCeeee
Q psy14440 678 KNSSLAYLVRSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 678 ~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
...........+...|.+|+|++++.+||
T Consensus 297 ---~~~~~~~~~~~~~~~v~~~~~sp~g~~l~ 325 (343)
T 2xzm_R 297 ---EPITKAEGQKGKNPQCTSLAWNALGKKLF 325 (343)
T ss_dssp ---CSGGGBTTBCCSCCCEEEEEECSSSCCEE
T ss_pred ---CcchhhhhhcCCCCceEEEEECCCCCeEE
Confidence 00001112345778899999999999888
No 19
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.5e-39 Score=342.45 Aligned_cols=278 Identities=23% Similarity=0.414 Sum_probs=233.1
Q ss_pred EEEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCc---------------eeeeccCccccccccccCCcEEE
Q psy14440 379 ACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK---------------LKAMKSSDQLQDIEMECDDILVR 443 (711)
Q Consensus 379 ~~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~---------------~~~~~~~~~~~~l~~~~~d~~i~ 443 (711)
+..++.+|.+.|++++|+++ +||+|+.|+.|++|++.... +..+.++++...++.++.|+.|+
T Consensus 6 ~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~ 83 (330)
T 2hes_X 6 LIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVS 83 (330)
T ss_dssp EEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred cceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEE
Confidence 56778999999999999988 99999999999999987532 22234455667788899999999
Q ss_pred EEecC-------CCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCC----CeEEEEEecCCCCEEEEEEcC
Q psy14440 444 IMDER-------NAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLL----WRCLVVYKGHGHPVWDIKFSP 512 (711)
Q Consensus 444 i~d~~-------~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t----~~~~~~~~~h~~~V~~v~~sp 512 (711)
+|+.. .......+.+|.+.|++++|+|++++|++|+.|++|++||+.. .+++..+.+|...|.+++|+|
T Consensus 84 iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p 163 (330)
T 2hes_X 84 IWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHP 163 (330)
T ss_dssp EEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECS
T ss_pred EEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECC
Confidence 99974 2456778899999999999999999999999999999999942 367888999999999999999
Q ss_pred CCCEEEEEECCCeEEEEECCCC--ceeEEeecCCCCeeEEEEcCC--CCEEEEEEcCCcEEEEECCCC--------cEEE
Q psy14440 513 HGYYFASAGHDRMARLWATDSY--HPLRLFVGHYSDVDCVQFHPN--SNYVATGSSDRTIRLWDCVTG--------SHVR 580 (711)
Q Consensus 513 ~g~~l~sgs~Dg~i~lwd~~~~--~~~~~~~~h~~~V~~v~~sp~--~~~latgs~Dg~I~iwD~~~~--------~~v~ 580 (711)
++.+|++|+.|++|++||..++ +++..+.+|...|.+++|+|+ +.+|++|+.|++|++||+.++ .+..
T Consensus 164 ~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~ 243 (330)
T 2hes_X 164 SEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEA 243 (330)
T ss_dssp SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEee
Confidence 9999999999999999998766 678889999999999999998 779999999999999998765 4455
Q ss_pred EeeC-CCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCe--EEEE-eeCCCC-CEEEEEEeC--CCCEEEEEeCCCcEE
Q psy14440 581 LLTG-HKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGH--LLTL-LTGHTD-VVRALCFSR--DGNILASSGQDCSVK 653 (711)
Q Consensus 581 ~~~~-h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~--~i~~-l~~h~~-~V~sl~fsp--dg~~Lasgs~Dg~V~ 653 (711)
.+.+ |...|++++|++++ +|++|+.||.|+|||..+++ .+.. ..+|.. .|++++|++ ++++|++|+.||+|+
T Consensus 244 ~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~ 322 (330)
T 2hes_X 244 ILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVN 322 (330)
T ss_dssp ECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEE
T ss_pred ecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEE
Confidence 5655 99999999999655 89999999999999998874 3333 367887 899999999 789999999999999
Q ss_pred EEeCCC
Q psy14440 654 LWDFAK 659 (711)
Q Consensus 654 iWdl~~ 659 (711)
|||+..
T Consensus 323 ~W~~~~ 328 (330)
T 2hes_X 323 FWSLEK 328 (330)
T ss_dssp EEEC--
T ss_pred EEEecc
Confidence 999864
No 20
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.7e-39 Score=349.09 Aligned_cols=324 Identities=18% Similarity=0.262 Sum_probs=276.4
Q ss_pred EEEEecCCCceEEEEECCCCC-EEEEEeCCCeEEEEeC----CCCc---------------------------eeeeccC
Q psy14440 380 CYTLLNARQQVTCAEISEDVS-ILAVGFSESYIKLWSL----VPQK---------------------------LKAMKSS 427 (711)
Q Consensus 380 ~~tl~~h~~~V~~l~fs~dg~-~LatG~~dg~I~vWdl----~~~~---------------------------~~~~~~~ 427 (711)
....+.|.+.|+|++|+++|+ +||+|+.||.|++|++ .+.+ +..+.++
T Consensus 38 ~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 117 (425)
T 1r5m_A 38 ILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWS 117 (425)
T ss_dssp ECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEEC
T ss_pred heeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEc
Confidence 345577789999999999999 9999999999999999 5544 3334455
Q ss_pred ccccccccccCCcEEEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCC---
Q psy14440 428 DQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHP--- 504 (711)
Q Consensus 428 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~--- 504 (711)
.+...+++++.++.|++|+ .++.....+.+|.+.|++++|++++++|++++.||.|++||+.+++.+..+..+...
T Consensus 118 ~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 196 (425)
T 1r5m_A 118 HDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSS 196 (425)
T ss_dssp TTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC------
T ss_pred CCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccc
Confidence 6677788889999999999 778888999999999999999999999999999999999999999999999888777
Q ss_pred ------------EEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEE
Q psy14440 505 ------------VWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWD 572 (711)
Q Consensus 505 ------------V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD 572 (711)
+.+++|++++ .+++++.||.|++||+.+++.+..+.+|...|.+++|++++++|++++.||.|++||
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d 275 (425)
T 1r5m_A 197 INAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWH 275 (425)
T ss_dssp ---------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred eeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 9999999875 689999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcE
Q psy14440 573 CVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSV 652 (711)
Q Consensus 573 ~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V 652 (711)
+.+++.+..+.+|...|.+++|++++ +|++++.||.|++||+.+++.+..+..|...|.+++|++++++|++|+.||.|
T Consensus 276 ~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i 354 (425)
T 1r5m_A 276 GGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQV 354 (425)
T ss_dssp SSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeE
Confidence 99999999999999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCccCccccccccccccccccccceeeecccCCc--ceEEEEEccCCeeee
Q psy14440 653 KLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKAS--PLLHLIFSRRNILLR 709 (711)
Q Consensus 653 ~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~--pV~~v~Fs~~n~lla 709 (711)
++||+........... ..............+..+..+.. +|.+++|++++.+|+
T Consensus 355 ~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 410 (425)
T 1r5m_A 355 NVYDLKKLNSKSRSLY---GNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKIS 410 (425)
T ss_dssp EEEECHHHHC-----------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEE
T ss_pred EEEECCCCccceeeee---cccccccCcccchhhhhhcCcccCCceEEEEccCCCceEE
Confidence 9999975432111100 00000111122336778888876 999999999998886
No 21
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.4e-38 Score=335.97 Aligned_cols=257 Identities=24% Similarity=0.394 Sum_probs=241.9
Q ss_pred ccccccccCCcEEEEEecCCCee--EEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEE
Q psy14440 430 LQDIEMECDDILVRIMDERNAET--TRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWD 507 (711)
Q Consensus 430 ~~~l~~~~~d~~i~i~d~~~~~~--~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~ 507 (711)
...++.++.|+.|++|+...... ...+.+|...|.+++|++++.++++++.|++|++||+.+++.+..+..|...+++
T Consensus 48 ~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~ 127 (321)
T 3ow8_A 48 SETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWT 127 (321)
T ss_dssp -CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCC
T ss_pred CCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEE
Confidence 45688899999999999876653 4578899999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCEEEEEECCCeEEEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCC
Q psy14440 508 IKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKA 587 (711)
Q Consensus 508 v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~ 587 (711)
++|+|++++|++|+.||.|++|++++++....+..|...|.+++|+|++++|++|+.||+|++||+++++.+..+.+|..
T Consensus 128 ~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~ 207 (321)
T 3ow8_A 128 LAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAM 207 (321)
T ss_dssp EEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred EEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCCccCcc
Q psy14440 588 PVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTE 667 (711)
Q Consensus 588 ~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~~~~~ 667 (711)
.|++++|+|+|++|++|+.||.|+|||+++++.+..+.+|.+.|.+++|+|++++|++|+.||+|+|||+.+
T Consensus 208 ~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~-------- 279 (321)
T 3ow8_A 208 PIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT-------- 279 (321)
T ss_dssp CCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT--------
T ss_pred ceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC--------
Confidence 999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred ccccccccccccccccceeeecccCCcceEEEEEccCCeeee
Q psy14440 668 EVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
..++.++..|...|.+|+|++++.+|+
T Consensus 280 ---------------~~~~~~~~~h~~~v~~v~~s~~g~~l~ 306 (321)
T 3ow8_A 280 ---------------RTCVHTFFDHQDQVWGVKYNGNGSKIV 306 (321)
T ss_dssp ---------------TEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred ---------------CEEEEEEcCCCCcEEEEEECCCCCEEE
Confidence 345667888999999999999998877
No 22
>2j49_A Transcription initiation factor TFIID subunit 5; nuclear protein, transcription regulation, TA TFIID, WD repeat; 2.3A {Saccharomyces cerevisiae} SCOP: d.379.1.1
Probab=100.00 E-value=1.4e-41 Score=314.33 Aligned_cols=137 Identities=29% Similarity=0.549 Sum_probs=129.9
Q ss_pred cCCChhHHHHHHHHHHHHHhhhcccchhhhhhhhHHHHHHHHHHHHhCCChHHHHHHHHHhcCCCcchHHHHHHHHhcCC
Q psy14440 138 SEGDPNLYEDAYQDLKKFIENSLDVYKYELGLVLYPVLVHMYIELVYNGHEHQATEMLHKHLMDHEPHYQEDLRKLSSVT 217 (711)
Q Consensus 138 ~~~~~~~~~~~~~~l~~~v~~~ld~~k~el~~~l~p~f~~~yl~lv~~~~~~~a~~f~~~~~~~~~~~~~~~~~~l~~~~ 217 (711)
.++||+.|+++|.+||+||++|||+||+||++|||||||||||+||++| .++|++||++|+++|+.+|.++|++|++|+
T Consensus 3 ~~~dp~~y~~~y~~Lr~wv~~sld~yk~EL~~lLyPlFvh~yL~Lv~~g-~~~A~~F~~~f~~~~~~~~~~~i~~L~~i~ 81 (148)
T 2j49_A 3 HMNAPENYIRAYSMLKNWVDSSLEIYKPELSYIMYPIFIYLFLNLVAKN-PVYARRFFDRFSPDFKDFHGSEINRLFSVN 81 (148)
T ss_dssp ----CTTHHHHHHHHHHHHHTSCTTTHHHHHHHHHHHHHHHHHHHHHHC-HHHHHHHHHHHGGGGHHHHHHHHHTTTTCC
T ss_pred cccCHHHHHHHHHHHHHHHHhCcHhhHHHHHHHHHHHHHHHHHHHHHcC-HHHHHHHHHHHhHHhHHHHHHHHHHHhcCC
Confidence 3668999999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred CcccccccHHHHHhhcCccEEEeCHHHHHHHHHHHhhcChh---hHHHHhhcceEEEEccC
Q psy14440 218 KRDQIRTNEIAETFRSTEFIIRMSRDTLSLLKRHLQEKKHT---VLLNIVQEHLYFDMYEG 275 (711)
Q Consensus 218 ~~~~~~~~~~~~~~~~~k~~v~~s~~~~~~l~~~l~~~~~~---~~~~i~~~~~~~~~~~~ 275 (711)
+++||++|+++++||+|||+|+||++++++|++||+++++. +|++|||+||+|++++|
T Consensus 82 ~p~hl~~n~~~~~fr~nKy~I~ls~~s~~lL~~fL~~~~~~gg~~ll~Iin~~i~i~v~~~ 142 (148)
T 2j49_A 82 SIDHIKENEVASAFQSHKYRITMSKTTLNLLLYFLNENESIGGSLIISVINQHLDPNIVES 142 (148)
T ss_dssp SHHHHHHCHHHHHHHSSCEEEEECHHHHHHHHHHHHHTGGGTHHHHHHHHHHHEEEEEC--
T ss_pred CHHHHhhCHHHHHHHhCCeEEEECHHHHHHHHHHHHHcCcccHHHHHHHHHHheeEeeeCC
Confidence 99999999999999999999999999999999999999888 99999999999999876
No 23
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.1e-37 Score=356.37 Aligned_cols=303 Identities=33% Similarity=0.551 Sum_probs=273.0
Q ss_pred eEEEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCce----------eeeccCccccccccccCCcEEEEEec
Q psy14440 378 IACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKL----------KAMKSSDQLQDIEMECDDILVRIMDE 447 (711)
Q Consensus 378 ~~~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~----------~~~~~~~~~~~l~~~~~d~~i~i~d~ 447 (711)
..+.++.+|...|.+++|++|+++|++|+.|+.|++|+..+..+ ..+.+.++...++.++.++.+++|+.
T Consensus 212 ~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~ 291 (577)
T 2ymu_A 212 QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNR 291 (577)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred cEEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeC
Confidence 35667889999999999999999999999999999999865443 23445566677888889999999995
Q ss_pred CCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEE
Q psy14440 448 RNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMAR 527 (711)
Q Consensus 448 ~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~ 527 (711)
+++....+.+|.+.|++++|+|++++|++++.|++|++||+.. ..+..+.+|...|++++|+|+|+++++|+.||.++
T Consensus 292 -~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~ 369 (577)
T 2ymu_A 292 -NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVK 369 (577)
T ss_dssp -TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred -CCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC-CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 5677888999999999999999999999999999999999864 55677889999999999999999999999999999
Q ss_pred EEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCC
Q psy14440 528 LWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGD 607 (711)
Q Consensus 528 lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~D 607 (711)
+|+. +++.+..+.+|...|.+++|+|++++|++++.|++|++||. +++.+..+.+|...|++++|+|++++|++++.|
T Consensus 370 ~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d 447 (577)
T 2ymu_A 370 LWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDD 447 (577)
T ss_dssp EEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCC
Confidence 9995 56788889999999999999999999999999999999995 678889999999999999999999999999999
Q ss_pred CcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCCccCccccccccccccccccccceee
Q psy14440 608 GNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVR 687 (711)
Q Consensus 608 g~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 687 (711)
+.|++||. +++.+..+.+|...|++++|+|+|++|++++.|++|++||.. ..++.
T Consensus 448 ~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~------------------------~~~~~ 502 (577)
T 2ymu_A 448 KTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN------------------------GQLLQ 502 (577)
T ss_dssp SEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT------------------------SCEEE
T ss_pred CEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC------------------------CCEEE
Confidence 99999996 678889999999999999999999999999999999999953 12455
Q ss_pred ecccCCcceEEEEEccCCeeee
Q psy14440 688 SYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 688 ~~~t~~~pV~~v~Fs~~n~lla 709 (711)
.+..|..+|.+|+|++++.+||
T Consensus 503 ~~~~h~~~v~~l~~s~dg~~l~ 524 (577)
T 2ymu_A 503 TLTGHSSSVRGVAFSPDGQTIA 524 (577)
T ss_dssp EEECCSSCEEEEEECTTSSCEE
T ss_pred EEeCCCCCEEEEEEcCCCCEEE
Confidence 6788999999999999999988
No 24
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.4e-37 Score=330.37 Aligned_cols=269 Identities=19% Similarity=0.286 Sum_probs=245.6
Q ss_pred CCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCC----
Q psy14440 417 VPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLW---- 492 (711)
Q Consensus 417 ~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~---- 492 (711)
....+..+.++.+...++.++.|+.|++||..++.....+..|...|.+++|+|++++|++|+.|+.|++|++.+.
T Consensus 54 H~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~ 133 (340)
T 1got_B 54 HLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNV 133 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSC
T ss_pred CCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcc
Confidence 3445566667777888999999999999999999999999999999999999999999999999999999999765
Q ss_pred eEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEE
Q psy14440 493 RCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWD 572 (711)
Q Consensus 493 ~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD 572 (711)
.....+.+|...|.++.|++++ .+++++.|++|++||+++++.+..+.+|...|.+++|+|++++|++|+.||+|++||
T Consensus 134 ~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd 212 (340)
T 1got_B 134 RVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWD 212 (340)
T ss_dssp EEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 4667788999999999999877 589999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeC--CCCCEEEEEEeCCCCEEEEEeCCC
Q psy14440 573 CVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTG--HTDVVRALCFSRDGNILASSGQDC 650 (711)
Q Consensus 573 ~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~--h~~~V~sl~fspdg~~Lasgs~Dg 650 (711)
++++.++..+.+|...|++++|+|+|++|++|+.||+|++||+++++.+..+.. +...|.+++|+++|++|++|+.||
T Consensus 213 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~ 292 (340)
T 1got_B 213 VREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF 292 (340)
T ss_dssp TTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCC
Confidence 999999999999999999999999999999999999999999999998877753 335799999999999999999999
Q ss_pred cEEEEeCCCCCCccCccccccccccccccccccceeeecccCCcceEEEEEccCCeeee
Q psy14440 651 SVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 651 ~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
.|++||+.+. ..+..+.+|..+|.+|+|++++.+||
T Consensus 293 ~i~vwd~~~~-----------------------~~~~~~~~h~~~v~~~~~s~dg~~l~ 328 (340)
T 1got_B 293 NCNVWDALKA-----------------------DRAGVLAGHDNRVSCLGVTDDGMAVA 328 (340)
T ss_dssp EEEEEETTTC-----------------------CEEEEEECCSSCEEEEEECTTSSCEE
T ss_pred eEEEEEcccC-----------------------cEeeEeecCCCcEEEEEEcCCCCEEE
Confidence 9999998642 23456788999999999999999888
No 25
>2j4b_A TAF5, transcription initiation factor TFIID subunit 72/ kDa; WD repeat; 2.5A {Encephalitozoon cuniculi} SCOP: d.379.1.1
Probab=100.00 E-value=1.4e-40 Score=305.19 Aligned_cols=134 Identities=31% Similarity=0.588 Sum_probs=127.6
Q ss_pred ChhHHHHHHHHHHHHHhhhcccchhhhhhhhHHHHHHHHHHHHhCCChHHHHHHHHHhcCCCcchHHHHHHHHhcCCCcc
Q psy14440 141 DPNLYEDAYQDLKKFIENSLDVYKYELGLVLYPVLVHMYIELVYNGHEHQATEMLHKHLMDHEPHYQEDLRKLSSVTKRD 220 (711)
Q Consensus 141 ~~~~~~~~~~~l~~~v~~~ld~~k~el~~~l~p~f~~~yl~lv~~~~~~~a~~f~~~~~~~~~~~~~~~~~~l~~~~~~~ 220 (711)
-|+.|+++|.+||+||++|||+||+||++|||||||||||+||++|+.++|++||+||+++|+.+ .++|++|++|++++
T Consensus 4 ~~~~y~~~y~~L~~wv~~sld~yk~EL~~lLyPlFvh~yL~Lv~~g~~~~A~~F~~~f~~~~~~~-~~~i~~L~~i~~~e 82 (138)
T 2j4b_A 4 MKDQMETSYVSLKTWIEDSLDLFKNDLLPLLYPLFIHIYFDLIQQNKTDEAKEFFEKYRGDHYNK-SEEIKQFESIYTVQ 82 (138)
T ss_dssp ---CHHHHHHHHHHHHHHSCHHHHHHHGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGC--C-HHHHHHHTTCCSHH
T ss_pred hHHHHHHHHHHHHHHHHhCcHhhHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHhHHHhhH-HHHHHHHhcCCCHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred cccccHHHHHhhcCccEEEeCHHHHHHHHHHHhhcChhhHHHHhhcceEEEEccC
Q psy14440 221 QIRTNEIAETFRSTEFIIRMSRDTLSLLKRHLQEKKHTVLLNIVQEHLYFDMYEG 275 (711)
Q Consensus 221 ~~~~~~~~~~~~~~k~~v~~s~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~~~~~ 275 (711)
|+++|+++++||+|||+|+||++++++|++||+++++++|++|||+||+|++++|
T Consensus 83 ~l~~n~~~~~fr~nKy~I~ls~~s~~lL~~fL~~~~~~~ll~Iin~~i~i~v~~g 137 (138)
T 2j4b_A 83 HIHENNFAYTFKNSKYHLSMGRYAFDLLINFLEERNLTYILKILNQHLDIKVYVG 137 (138)
T ss_dssp HHHHCHHHHHHHHSCEEEEEEHHHHHHHHHHHHHTTCHHHHHHHHHHEEEEEECC
T ss_pred HHhhCHHHHHHHhCCeEEEECHHHHHHHHHHHHHCCChHHHHHHHHheeeEeeCC
Confidence 9999999999999999999999999999999999999999999999999999875
No 26
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=6.4e-38 Score=329.47 Aligned_cols=250 Identities=25% Similarity=0.365 Sum_probs=219.2
Q ss_pred EEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeeccc
Q psy14440 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHE 460 (711)
Q Consensus 381 ~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~ 460 (711)
..+.+|.+.|++++|+++|++||+|+.|++|+||++.+. +.+....+.+|.
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~-----------------------------~~~~~~~l~gH~ 53 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGE-----------------------------THKLIDTLTGHE 53 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSS-----------------------------CBCCCEEECCCS
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCC-----------------------------CcEEEEEEcccc
Confidence 356789999999999999999999999999999998532 223456788999
Q ss_pred CCEEEEEEcCC--CCEEEEEeCCCeEEEEECCCCe--EEEEEecCCCCEEEEEEcCC--CCEEEEEECCCeEEEEECCCC
Q psy14440 461 GPVRKLSFSPD--RSLLLSCSQDNTIRLWSLLLWR--CLVVYKGHGHPVWDIKFSPH--GYYFASAGHDRMARLWATDSY 534 (711)
Q Consensus 461 ~~V~~l~fspd--g~~L~s~s~Dg~V~iwdl~t~~--~~~~~~~h~~~V~~v~~sp~--g~~l~sgs~Dg~i~lwd~~~~ 534 (711)
+.|++++|+++ +++|++|+.||+|++||+.+++ .+..+.+|...|.+++|+|+ |.+|++|+.|++|++||+++.
T Consensus 54 ~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 54 GPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred CCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 99999999864 8999999999999999998763 56678889999999999997 889999999999999999876
Q ss_pred c--eeEEeecCCCCeeEEEEcCC-------------CCEEEEEEcCCcEEEEECCCCc----EEEEeeCCCCCeEEEEEe
Q psy14440 535 H--PLRLFVGHYSDVDCVQFHPN-------------SNYVATGSSDRTIRLWDCVTGS----HVRLLTGHKAPVYALSFS 595 (711)
Q Consensus 535 ~--~~~~~~~h~~~V~~v~~sp~-------------~~~latgs~Dg~I~iwD~~~~~----~v~~~~~h~~~I~~la~s 595 (711)
. ....+.+|...|.+++|+|+ +++|++|+.|++|++||+++++ ....+.+|...|.+++|+
T Consensus 134 ~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~s 213 (297)
T 2pm7_B 134 GTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS 213 (297)
T ss_dssp SCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC
T ss_pred CceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEEC
Confidence 3 24567899999999999996 5799999999999999998876 667888999999999999
Q ss_pred cCC---CEEEEEeCCCcEEEEECCCCe---EEEEe--eCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 596 VCG---RFLASAGGDGNVHMWDLSNGH---LLTLL--TGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 596 pdg---~~Lasgs~Dg~I~iwDl~sg~---~i~~l--~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
|++ .+|++|+.||+|+|||+.++. ....+ .+|.+.|++++|+++|++||+|+.||+|+||+...
T Consensus 214 p~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 214 PTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp CCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred CCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 985 899999999999999997743 22333 46788999999999999999999999999999763
No 27
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=7.3e-39 Score=351.02 Aligned_cols=307 Identities=18% Similarity=0.200 Sum_probs=260.1
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceee----------eccCccccccccccCCcEEEEEecCCCeeEEEeec
Q psy14440 389 QVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKA----------MKSSDQLQDIEMECDDILVRIMDERNAETTRTLVG 458 (711)
Q Consensus 389 ~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~----------~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~ 458 (711)
.+++++|+++|++|++|+.||.|++|++.+.+... ...+.+...+++++.++.|++||..+++....+.+
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 137 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQA 137 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTS
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeeccc
Confidence 35578999999999999999999999997654221 13455667788899999999999999999888899
Q ss_pred ccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeE
Q psy14440 459 HEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLR 538 (711)
Q Consensus 459 h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~ 538 (711)
|.+.|++++|++++++|++|+.||+|++||+.+++.+..+.+|...|++++|+|++.+|++++.||+|++||+++++.+.
T Consensus 138 h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 217 (420)
T 3vl1_A 138 HVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIH 217 (420)
T ss_dssp SSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred ccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred Eeec---CC---------------------CCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEee-CCCCCeEEEE
Q psy14440 539 LFVG---HY---------------------SDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLT-GHKAPVYALS 593 (711)
Q Consensus 539 ~~~~---h~---------------------~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~-~h~~~I~~la 593 (711)
.+.. |. ..+.+++|+|++++|++|+.||.|++||+++++.+..+. +|...|++++
T Consensus 218 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~ 297 (420)
T 3vl1_A 218 TFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLT 297 (420)
T ss_dssp EECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEE
T ss_pred EeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEE
Confidence 8875 33 444455567899999999999999999999998877765 5889999999
Q ss_pred EecCCC-EEEEEeCCCcEEEEECCCCeE-EEEeeC-CCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCCccCccccc
Q psy14440 594 FSVCGR-FLASAGGDGNVHMWDLSNGHL-LTLLTG-HTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVN 670 (711)
Q Consensus 594 ~spdg~-~Lasgs~Dg~I~iwDl~sg~~-i~~l~~-h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~~ 670 (711)
|+|+++ +|++|+.||.|++||+++++. +..+.+ |...|+++.|. ++++|++|+.||+|++||+..........
T Consensus 298 ~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~~d~~v~iw~~~~~~~~~~~~--- 373 (420)
T 3vl1_A 298 VDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFA-AGALFVSSGFDTSIKLDIISDPESERPAI--- 373 (420)
T ss_dssp ECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEE-TTEEEEEETTTEEEEEEEECCTTCCSCEE---
T ss_pred EeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeC-CCCEEEEecCCccEEEEeccCCCCCccce---
Confidence 999999 999999999999999998754 677776 66788888654 78899999999999999998743221110
Q ss_pred cccccccccccccceeeecccCCcceEEEEEccCCe----eee-C
Q psy14440 671 LSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNI----LLR-G 710 (711)
Q Consensus 671 ~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~----lla-G 710 (711)
.......+..+...|.+++|++++. ++| |
T Consensus 374 -----------~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g 407 (420)
T 3vl1_A 374 -----------EFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVG 407 (420)
T ss_dssp -----------CTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEE
T ss_pred -----------eccCccEEccCCcceEEEEEccCCCCcceEEEEc
Confidence 0111123567788999999999988 777 5
No 28
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.2e-39 Score=349.46 Aligned_cols=323 Identities=17% Similarity=0.309 Sum_probs=268.4
Q ss_pred CceEEEEECCCCC-EEEEE----------eCCCeEEEEeCCCCc-------------eeeeccCccccccccccCCcEEE
Q psy14440 388 QQVTCAEISEDVS-ILAVG----------FSESYIKLWSLVPQK-------------LKAMKSSDQLQDIEMECDDILVR 443 (711)
Q Consensus 388 ~~V~~l~fs~dg~-~LatG----------~~dg~I~vWdl~~~~-------------~~~~~~~~~~~~l~~~~~d~~i~ 443 (711)
..|.|++|+|+|+ +||+| +.|+.|+||++.+.. +..+.++.+...++.++.++.|+
T Consensus 13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~ 92 (416)
T 2pm9_A 13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLE 92 (416)
T ss_dssp EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEE
T ss_pred hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEE
Confidence 5789999999997 99999 889999999997643 23345566777888888999999
Q ss_pred EEecCC----CeeEEEeecccCCEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCe------EEEE---EecCCCCEEEEE
Q psy14440 444 IMDERN----AETTRTLVGHEGPVRKLSFSPD-RSLLLSCSQDNTIRLWSLLLWR------CLVV---YKGHGHPVWDIK 509 (711)
Q Consensus 444 i~d~~~----~~~~~~l~~h~~~V~~l~fspd-g~~L~s~s~Dg~V~iwdl~t~~------~~~~---~~~h~~~V~~v~ 509 (711)
+|+..+ ......+.+|.+.|++++|+++ +++|++++.||+|++||+.+++ .... +.+|...|.+++
T Consensus 93 vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 172 (416)
T 2pm9_A 93 LYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLA 172 (416)
T ss_dssp EECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEE
T ss_pred EeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEE
Confidence 999887 4578899999999999999998 8999999999999999998876 3322 367899999999
Q ss_pred EcCC-CCEEEEEECCCeEEEEECCCCceeEEeecC------CCCeeEEEEcCCC-CEEEEEEcCC---cEEEEECCCC-c
Q psy14440 510 FSPH-GYYFASAGHDRMARLWATDSYHPLRLFVGH------YSDVDCVQFHPNS-NYVATGSSDR---TIRLWDCVTG-S 577 (711)
Q Consensus 510 ~sp~-g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~h------~~~V~~v~~sp~~-~~latgs~Dg---~I~iwD~~~~-~ 577 (711)
|+++ +.+|++++.||.|++||+++++.+..+..+ ...|.+++|+|++ .++++++.|+ .|++||++++ .
T Consensus 173 ~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~ 252 (416)
T 2pm9_A 173 WNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT 252 (416)
T ss_dssp ECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS
T ss_pred eCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC
Confidence 9998 789999999999999999999998888876 7889999999987 6899999998 9999999987 6
Q ss_pred EEEEee-CCCCCeEEEEEec-CCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCC-CEEEEEeCCCcEEE
Q psy14440 578 HVRLLT-GHKAPVYALSFSV-CGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDG-NILASSGQDCSVKL 654 (711)
Q Consensus 578 ~v~~~~-~h~~~I~~la~sp-dg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg-~~Lasgs~Dg~V~i 654 (711)
.+..+. +|...|++++|+| ++++|++|+.||.|++||+.+++.+..+.+|.+.|++++|++++ .+|++++.||+|+|
T Consensus 253 ~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~i 332 (416)
T 2pm9_A 253 PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEV 332 (416)
T ss_dssp CSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEE
T ss_pred CcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEE
Confidence 777888 8999999999999 99999999999999999999999999999999999999999999 89999999999999
Q ss_pred EeCCCCCCccCccccccccc--cc-cc---------cccccceeeecccCCcceEEEEEccCCeeee-C
Q psy14440 655 WDFAKLSDEVGTEEVNLSHS--AD-IK---------NSSLAYLVRSYKTKASPLLHLIFSRRNILLR-G 710 (711)
Q Consensus 655 Wdl~~~~~~~~~~~~~~~~~--~~-~~---------~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla-G 710 (711)
||+.........+....... .. .. .......+.....+..+|.+++|+++|.+|| |
T Consensus 333 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~ 401 (416)
T 2pm9_A 333 QTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQIT 401 (416)
T ss_dssp EESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBC
T ss_pred EEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEe
Confidence 99988665433221000000 00 00 0000001122334677899999999999999 6
No 29
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-36 Score=325.24 Aligned_cols=283 Identities=17% Similarity=0.238 Sum_probs=257.5
Q ss_pred CceEEEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCc-----------eeeeccCccccccccccCCcEEEE
Q psy14440 376 PSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK-----------LKAMKSSDQLQDIEMECDDILVRI 444 (711)
Q Consensus 376 ps~~~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~-----------~~~~~~~~~~~~l~~~~~d~~i~i 444 (711)
......++.+|.+.|+|++|++++++||+|+.||.|+||++.+.+ +..+.++.+...++.++.++.|++
T Consensus 21 ~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~i 100 (369)
T 3zwl_B 21 SHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKL 100 (369)
T ss_dssp CSEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEE
T ss_pred cccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 356778899999999999999999999999999999999987654 233455566777888899999999
Q ss_pred EecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCe-----------EEEEEecCCC--CEE
Q psy14440 445 MDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQD-----NTIRLWSLLLWR-----------CLVVYKGHGH--PVW 506 (711)
Q Consensus 445 ~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~D-----g~V~iwdl~t~~-----------~~~~~~~h~~--~V~ 506 (711)
||..+++....+. |...|.+++|++++++|++++.+ |.|++||+.... .+..+..|.. .+.
T Consensus 101 wd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (369)
T 3zwl_B 101 WDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAAT 179 (369)
T ss_dssp EETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEE
T ss_pred EECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcccee
Confidence 9999999888887 88999999999999999999999 999999986542 3445556666 999
Q ss_pred EEEEcCCCCEEEEEECCCeEEEEECCC-CceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCC
Q psy14440 507 DIKFSPHGYYFASAGHDRMARLWATDS-YHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH 585 (711)
Q Consensus 507 ~v~~sp~g~~l~sgs~Dg~i~lwd~~~-~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h 585 (711)
+++|++++++|++++.||.|++||+++ ...+..+..|...|.+++|+|++++|++++.||.|++||+++++.+..+. +
T Consensus 180 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~ 258 (369)
T 3zwl_B 180 VAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-T 258 (369)
T ss_dssp EEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-C
T ss_pred EEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-C
Confidence 999999999999999999999999998 78888999999999999999999999999999999999999999998888 7
Q ss_pred CCCeEEEEEecCCCEEEEEeCCC--------------cEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCc
Q psy14440 586 KAPVYALSFSVCGRFLASAGGDG--------------NVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCS 651 (711)
Q Consensus 586 ~~~I~~la~spdg~~Lasgs~Dg--------------~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~ 651 (711)
...+.+++|+++++++++++.++ .|++||+.+++.+..+.+|.+.|++++|+++|++|++|+.||+
T Consensus 259 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~ 338 (369)
T 3zwl_B 259 DCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGF 338 (369)
T ss_dssp SSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred CCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCe
Confidence 88999999999999999999988 8999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCC
Q psy14440 652 VKLWDFAKL 660 (711)
Q Consensus 652 V~iWdl~~~ 660 (711)
|+||++...
T Consensus 339 v~iw~~~~~ 347 (369)
T 3zwl_B 339 IRLHHFEKS 347 (369)
T ss_dssp EEEEEECHH
T ss_pred EEEEECccc
Confidence 999999763
No 30
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.2e-36 Score=320.49 Aligned_cols=280 Identities=26% Similarity=0.375 Sum_probs=247.9
Q ss_pred EEEEecCCCceEEEEECCC-CCEEEEEeCCCeEEEEeCCCCc----------------eeeeccCccccccccccCCcEE
Q psy14440 380 CYTLLNARQQVTCAEISED-VSILAVGFSESYIKLWSLVPQK----------------LKAMKSSDQLQDIEMECDDILV 442 (711)
Q Consensus 380 ~~tl~~h~~~V~~l~fs~d-g~~LatG~~dg~I~vWdl~~~~----------------~~~~~~~~~~~~l~~~~~d~~i 442 (711)
..+|.+|.+.|+|++|+|+ +++||+|+.||+|+|||+...+ +..+.++.+...++.++.|+.+
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i 110 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 110 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccc
Confidence 4579999999999999997 6899999999999999986532 2344556677788899999999
Q ss_pred EEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEE-EEEecCCCCEEEEEEcCCC--CEEEE
Q psy14440 443 RIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCL-VVYKGHGHPVWDIKFSPHG--YYFAS 519 (711)
Q Consensus 443 ~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~-~~~~~h~~~V~~v~~sp~g--~~l~s 519 (711)
++|+............+...+..+.+++++.+|++|+.|+.+++||+...... ....+|...+.+++|++++ .++++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s 190 (340)
T 4aow_A 111 RLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 190 (340)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEE
T ss_pred eEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEE
Confidence 99999999999999999999999999999999999999999999999765543 3456789999999998864 58899
Q ss_pred EECCCeEEEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCC
Q psy14440 520 AGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGR 599 (711)
Q Consensus 520 gs~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~ 599 (711)
++.|++|++||+++++.+..+.+|...|.+++|+|++++|++|+.||+|++||+++++.+..+.++ ..|.+++|++++.
T Consensus 191 ~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~ 269 (340)
T 4aow_A 191 CGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSPNRY 269 (340)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEEECSSSS
T ss_pred EcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeeecCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999888754 6799999999887
Q ss_pred EEEEEeCCCcEEEEECCCCeEEEEee---------CCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCC
Q psy14440 600 FLASAGGDGNVHMWDLSNGHLLTLLT---------GHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLS 661 (711)
Q Consensus 600 ~Lasgs~Dg~I~iwDl~sg~~i~~l~---------~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~ 661 (711)
++ +++.|+.|++||++++..+..+. +|...|++++|+++|++|++|+.||+|+|||+++++
T Consensus 270 ~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 270 WL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred ee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 65 55678999999999988776654 678899999999999999999999999999998643
No 31
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.1e-36 Score=318.22 Aligned_cols=275 Identities=19% Similarity=0.305 Sum_probs=248.3
Q ss_pred EEEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCc----------------eeeeccCccccccccccCCcEE
Q psy14440 379 ACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK----------------LKAMKSSDQLQDIEMECDDILV 442 (711)
Q Consensus 379 ~~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~----------------~~~~~~~~~~~~l~~~~~d~~i 442 (711)
......+|.+.|++++|++++++|++|+ ||.|++|++.+.. +..+..+++...++.++.++.+
T Consensus 43 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 121 (337)
T 1gxr_A 43 RQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTL 121 (337)
T ss_dssp EEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEE
T ss_pred ccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcE
Confidence 3445568999999999999999999999 9999999996543 2234455566778888999999
Q ss_pred EEEecCCCe--eEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEE
Q psy14440 443 RIMDERNAE--TTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASA 520 (711)
Q Consensus 443 ~i~d~~~~~--~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sg 520 (711)
++||..+++ ....+.+|...|++++|++++++|++++.||.|++||+.+++.+..+.+|...|.+++|++++++|+++
T Consensus 122 ~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 201 (337)
T 1gxr_A 122 SIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTG 201 (337)
T ss_dssp EEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEE
Confidence 999998877 667788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCeEEEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCE
Q psy14440 521 GHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRF 600 (711)
Q Consensus 521 s~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~ 600 (711)
+.||.|++||+++++.+..+. +...+.+++|+|++++|++++.|+.|++||+.+++. ..+..|...|.+++|+++|++
T Consensus 202 ~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~ 279 (337)
T 1gxr_A 202 GLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKW 279 (337)
T ss_dssp ETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSE
T ss_pred ecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCE
Confidence 999999999999998877764 778899999999999999999999999999998875 466789999999999999999
Q ss_pred EEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeC
Q psy14440 601 LASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDF 657 (711)
Q Consensus 601 Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl 657 (711)
|++++.||.|++||+.+++.+... .|...|.+++|++++++|++++.||.|++||+
T Consensus 280 l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 280 FVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred EEEecCCCcEEEEECCCCeEEEEe-cCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 999999999999999999888554 47889999999999999999999999999997
No 32
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.9e-37 Score=336.87 Aligned_cols=278 Identities=17% Similarity=0.199 Sum_probs=249.9
Q ss_pred EEEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCc-------ee----------eeccCcc----c---cccc
Q psy14440 379 ACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK-------LK----------AMKSSDQ----L---QDIE 434 (711)
Q Consensus 379 ~~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~-------~~----------~~~~~~~----~---~~l~ 434 (711)
...++.+|.+.|+|++|++ ++||+|+.||.|+||++.+.+ +. .+.+..+ . ..++
T Consensus 8 ~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~ 85 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA 85 (397)
T ss_dssp EEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred hhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEE
Confidence 3456788999999999999 899999999999999998765 22 2334445 5 6788
Q ss_pred cccCCcEEEEEecCCCee-----EEEeecc-----cCCEEEEEEc----CCCCE-EEEEeCCCeEEEEECCC------Ce
Q psy14440 435 MECDDILVRIMDERNAET-----TRTLVGH-----EGPVRKLSFS----PDRSL-LLSCSQDNTIRLWSLLL------WR 493 (711)
Q Consensus 435 ~~~~d~~i~i~d~~~~~~-----~~~l~~h-----~~~V~~l~fs----pdg~~-L~s~s~Dg~V~iwdl~t------~~ 493 (711)
.++.++.|++|+..+++. ...+.+| .+.|.+++|+ +++++ |++|+.||.|++||+.+ ++
T Consensus 86 s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 165 (397)
T 1sq9_A 86 TTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSL 165 (397)
T ss_dssp EEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHT
T ss_pred EEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccc
Confidence 888999999999988876 8888899 5999999999 99999 99999999999999988 66
Q ss_pred EEE-----EEe-------cCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEeec---C---CCCeeEEEEcCC
Q psy14440 494 CLV-----VYK-------GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVG---H---YSDVDCVQFHPN 555 (711)
Q Consensus 494 ~~~-----~~~-------~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~---h---~~~V~~v~~sp~ 555 (711)
.+. .+. .|...|++++|++++ +|++++.||.|++||+++++.+..+.. | ...|.+++|+|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~ 244 (397)
T 1sq9_A 166 TLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQ 244 (397)
T ss_dssp TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSS
T ss_pred eeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCC
Confidence 555 664 489999999999999 999999999999999999999999998 9 999999999999
Q ss_pred CCEEEEEEcC---CcEEEEECCCCcEEEEeeC-------------CCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCe
Q psy14440 556 SNYVATGSSD---RTIRLWDCVTGSHVRLLTG-------------HKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGH 619 (711)
Q Consensus 556 ~~~latgs~D---g~I~iwD~~~~~~v~~~~~-------------h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~ 619 (711)
+++|++|+.| |.|++||+++++.+..+.+ |...|.+++|+++|++|++|+.||.|+|||+.+++
T Consensus 245 ~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 324 (397)
T 1sq9_A 245 GSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKE 324 (397)
T ss_dssp TTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE
T ss_pred CCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCc
Confidence 9999999999 9999999999999999998 99999999999999999999999999999999999
Q ss_pred EEEEee------CC---------------CCCEEEEEEeCCC----------CEEEEEeCCCcEEEEeCCC
Q psy14440 620 LLTLLT------GH---------------TDVVRALCFSRDG----------NILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 620 ~i~~l~------~h---------------~~~V~sl~fspdg----------~~Lasgs~Dg~V~iWdl~~ 659 (711)
.+..+. +| ...|++++|+++| ++|++|+.||.|++||+.+
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 325 RITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp EEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred eeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 999999 88 9999999999998 7999999999999999875
No 33
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.8e-36 Score=356.16 Aligned_cols=278 Identities=26% Similarity=0.375 Sum_probs=243.9
Q ss_pred EEEEecCCCceEEEEECCCC-CEEEEEeCCCeEEEEeCCCCc----------------eeeeccCccccccccccCCcEE
Q psy14440 380 CYTLLNARQQVTCAEISEDV-SILAVGFSESYIKLWSLVPQK----------------LKAMKSSDQLQDIEMECDDILV 442 (711)
Q Consensus 380 ~~tl~~h~~~V~~l~fs~dg-~~LatG~~dg~I~vWdl~~~~----------------~~~~~~~~~~~~l~~~~~d~~i 442 (711)
...+.+|.+.|+|++|++++ ++|++|+.||+|+||++.... +..+..+.+...++.++.|+.|
T Consensus 375 ~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v 454 (694)
T 3dm0_A 375 KGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGEL 454 (694)
T ss_dssp EEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred hhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcE
Confidence 34688999999999999865 799999999999999986421 2334556677788899999999
Q ss_pred EEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEE---ecCCCCEEEEEEcCCC--CEE
Q psy14440 443 RIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY---KGHGHPVWDIKFSPHG--YYF 517 (711)
Q Consensus 443 ~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~---~~h~~~V~~v~~sp~g--~~l 517 (711)
++||..++...+.+.+|.+.|++++|++++++|++|+.|++|++||+......... .+|...|.+++|++++ ..+
T Consensus 455 ~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 534 (694)
T 3dm0_A 455 RLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTI 534 (694)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEE
T ss_pred EEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceE
Confidence 99999999999999999999999999999999999999999999998755433332 3688899999999986 689
Q ss_pred EEEECCCeEEEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecC
Q psy14440 518 ASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVC 597 (711)
Q Consensus 518 ~sgs~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spd 597 (711)
++|+.|++|++||+++++....+.+|.+.|.+++|+|++++|++|+.||+|++||+++++++..+. +...|.+++|+|+
T Consensus 535 ~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~ 613 (694)
T 3dm0_A 535 VSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE-ANSVIHALCFSPN 613 (694)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB-CSSCEEEEEECSS
T ss_pred EEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec-CCCcEEEEEEcCC
Confidence 999999999999999999999999999999999999999999999999999999999999888776 4567999999999
Q ss_pred CCEEEEEeCCCcEEEEECCCCeEEEEeeCCC-------------------CCEEEEEEeCCCCEEEEEeCCCcEEEEeCC
Q psy14440 598 GRFLASAGGDGNVHMWDLSNGHLLTLLTGHT-------------------DVVRALCFSRDGNILASSGQDCSVKLWDFA 658 (711)
Q Consensus 598 g~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~-------------------~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~ 658 (711)
+.+|++++ ++.|+|||+.+++.+..+..+. ..+++++|+++|++|++|+.||+|+|||+.
T Consensus 614 ~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 614 RYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp SSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 99888776 4569999999999888775432 137899999999999999999999999986
Q ss_pred C
Q psy14440 659 K 659 (711)
Q Consensus 659 ~ 659 (711)
+
T Consensus 693 ~ 693 (694)
T 3dm0_A 693 R 693 (694)
T ss_dssp -
T ss_pred C
Confidence 4
No 34
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.7e-36 Score=324.60 Aligned_cols=273 Identities=19% Similarity=0.254 Sum_probs=246.4
Q ss_pred EeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-
Q psy14440 414 WSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLW- 492 (711)
Q Consensus 414 Wdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~- 492 (711)
..-....+..+.++++...++.++.|+.+++||..+++....+..|...|.+++|+|+|.+|++|+.|+.+++|++...
T Consensus 60 l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~ 139 (354)
T 2pbi_B 60 LKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDK 139 (354)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCT
T ss_pred ecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccc
Confidence 3334455666777777888999999999999999999999999999999999999999999999999999999998543
Q ss_pred -----eEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEeecCCCCeeEEEEcC--CCCEEEEEEcC
Q psy14440 493 -----RCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHP--NSNYVATGSSD 565 (711)
Q Consensus 493 -----~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp--~~~~latgs~D 565 (711)
.....+.+|...|.+++|++++..|++++.|++|++||+++++.+..+.+|...|.+++|++ ++++|++|+.|
T Consensus 140 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~D 219 (354)
T 2pbi_B 140 NENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCD 219 (354)
T ss_dssp TCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETT
T ss_pred cccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCC
Confidence 34556778999999999999999999999999999999999999999999999999999988 57899999999
Q ss_pred CcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCC--CCCEEEEEEeCCCCEE
Q psy14440 566 RTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGH--TDVVRALCFSRDGNIL 643 (711)
Q Consensus 566 g~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h--~~~V~sl~fspdg~~L 643 (711)
|+|++||+++++++..+.+|...|++++|+|+|++|++|+.||+|++||+++++.+..+..+ ...+.+++|+++|++|
T Consensus 220 g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l 299 (354)
T 2pbi_B 220 KKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLL 299 (354)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEE
T ss_pred CeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEE
Confidence 99999999999999999999999999999999999999999999999999999888777644 3578999999999999
Q ss_pred EEEeCCCcEEEEeCCCCCCccCccccccccccccccccccceeeecccCCcceEEEEEccCCeeee
Q psy14440 644 ASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 644 asgs~Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
++|+.||+|++||+.+. ..+..+..|..+|.+|+|++++.+||
T Consensus 300 ~~g~~d~~i~vwd~~~~-----------------------~~~~~l~~h~~~v~~l~~spdg~~l~ 342 (354)
T 2pbi_B 300 FAGYNDYTINVWDVLKG-----------------------SRVSILFGHENRVSTLRVSPDGTAFC 342 (354)
T ss_dssp EEEETTSCEEEEETTTC-----------------------SEEEEECCCSSCEEEEEECTTSSCEE
T ss_pred EEEECCCcEEEEECCCC-----------------------ceEEEEECCCCcEEEEEECCCCCEEE
Confidence 99999999999998642 23456778999999999999999988
No 35
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=4.6e-37 Score=328.53 Aligned_cols=275 Identities=23% Similarity=0.367 Sum_probs=241.5
Q ss_pred EEecCCCceEEEEECCC----CCEEEEEeCCCeEEEEeCCCCce----------------eeeccCcc----cccccccc
Q psy14440 382 TLLNARQQVTCAEISED----VSILAVGFSESYIKLWSLVPQKL----------------KAMKSSDQ----LQDIEMEC 437 (711)
Q Consensus 382 tl~~h~~~V~~l~fs~d----g~~LatG~~dg~I~vWdl~~~~~----------------~~~~~~~~----~~~l~~~~ 437 (711)
...+|.+.|++++|+|+ ...+++++.++.|+||++.+.+. ..+.++.+ ...++.++
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 34589999999999984 45666666777999999975432 22233333 34688899
Q ss_pred CCcEEEEEecCCCeeEEEeecccCCEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCeEEEEE---ecCCCCEEEEEEcCC
Q psy14440 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSP-DRSLLLSCSQDNTIRLWSLLLWRCLVVY---KGHGHPVWDIKFSPH 513 (711)
Q Consensus 438 ~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~fsp-dg~~L~s~s~Dg~V~iwdl~t~~~~~~~---~~h~~~V~~v~~sp~ 513 (711)
.++.|++||..+++....+.+|.+.|++++|++ ++++|++|+.||+|++||+.+++.+..+ .+|...|.+++|+++
T Consensus 93 ~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 172 (366)
T 3k26_A 93 SRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLL 172 (366)
T ss_dssp TTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTT
T ss_pred CCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCC
Confidence 999999999999999999999999999999999 9999999999999999999999999998 689999999999999
Q ss_pred CCEEEEEECCCeEEEEECCCCceeEEee----------------------------cCCCCeeEEEEcCCCCEEEEEEcC
Q psy14440 514 GYYFASAGHDRMARLWATDSYHPLRLFV----------------------------GHYSDVDCVQFHPNSNYVATGSSD 565 (711)
Q Consensus 514 g~~l~sgs~Dg~i~lwd~~~~~~~~~~~----------------------------~h~~~V~~v~~sp~~~~latgs~D 565 (711)
+.+|++++.||.|++||+++++.+..+. +|...|.+++|+ +++|++++.|
T Consensus 173 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d 250 (366)
T 3k26_A 173 GEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCE 250 (366)
T ss_dssp SSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSS
T ss_pred CCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecC
Confidence 9999999999999999999876544333 399999999998 7899999999
Q ss_pred CcEEEEECCCCcE--------------EEEeeCCCCCeEEEEEecC--CCEEEEEeCCCcEEEEECCCCe----EEEEee
Q psy14440 566 RTIRLWDCVTGSH--------------VRLLTGHKAPVYALSFSVC--GRFLASAGGDGNVHMWDLSNGH----LLTLLT 625 (711)
Q Consensus 566 g~I~iwD~~~~~~--------------v~~~~~h~~~I~~la~spd--g~~Lasgs~Dg~I~iwDl~sg~----~i~~l~ 625 (711)
|.|++||+.++.. +..+.+|...|++++|+++ |++|++|+.||.|++||+.+++ .+..+.
T Consensus 251 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 330 (366)
T 3k26_A 251 NAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLT 330 (366)
T ss_dssp SEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEEC
T ss_pred CEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEc
Confidence 9999999988754 7888899999999999999 9999999999999999999875 556788
Q ss_pred CC--CCCEEEEEEeCCCCEEEEEeCCCcEEEEeCC
Q psy14440 626 GH--TDVVRALCFSRDGNILASSGQDCSVKLWDFA 658 (711)
Q Consensus 626 ~h--~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~ 658 (711)
+| .+.|++++|++++++|++|+.||.|++||+.
T Consensus 331 ~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 331 HHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp CTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred ccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 87 6899999999999999999999999999985
No 36
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.2e-37 Score=328.94 Aligned_cols=285 Identities=16% Similarity=0.204 Sum_probs=244.3
Q ss_pred CceEEEEEecCCCceEEEEECCCCC-EEEEEeC---CCeEEEEeCCCCcee------------eeccCcc---ccccccc
Q psy14440 376 PSIACYTLLNARQQVTCAEISEDVS-ILAVGFS---ESYIKLWSLVPQKLK------------AMKSSDQ---LQDIEME 436 (711)
Q Consensus 376 ps~~~~tl~~h~~~V~~l~fs~dg~-~LatG~~---dg~I~vWdl~~~~~~------------~~~~~~~---~~~l~~~ 436 (711)
|.+..+.+.+|.+.|++++|+|++. ++++|+. ||.|+||++.+.+.. .+.++.+ ...++.+
T Consensus 7 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~ 86 (357)
T 3i2n_A 7 PQIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATG 86 (357)
T ss_dssp CCEEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEE
T ss_pred hHHhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEe
Confidence 5566777889999999999999995 5566766 999999999876532 2334444 4778888
Q ss_pred cCCcEEEEEecCCCe-eEEEeecccCCEEEEEE------cCCCCEEEEEeCCCeEEEEECCCCe-EEEEEecCCC----C
Q psy14440 437 CDDILVRIMDERNAE-TTRTLVGHEGPVRKLSF------SPDRSLLLSCSQDNTIRLWSLLLWR-CLVVYKGHGH----P 504 (711)
Q Consensus 437 ~~d~~i~i~d~~~~~-~~~~l~~h~~~V~~l~f------spdg~~L~s~s~Dg~V~iwdl~t~~-~~~~~~~h~~----~ 504 (711)
+.++.|++||..+++ ....+.+|.+.|.+++| ++++++|++|+.||+|++||+.+++ .+..+..|.. .
T Consensus 87 ~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 166 (357)
T 3i2n_A 87 DFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRD 166 (357)
T ss_dssp ETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCC
T ss_pred cCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCc
Confidence 999999999999888 88899999999999955 6799999999999999999999886 6777776654 8
Q ss_pred EEEEE----EcCCCCEEEEEECCCeEEEEECCCCceeEEeecCCCCeeEEEEcC---CCCEEEEEEcCCcEEEEECCCCc
Q psy14440 505 VWDIK----FSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHP---NSNYVATGSSDRTIRLWDCVTGS 577 (711)
Q Consensus 505 V~~v~----~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp---~~~~latgs~Dg~I~iwD~~~~~ 577 (711)
|++++ |++++.++++++.||.|++||+++++... ...|...|.+++|+| ++++|++|+.||.|++||+++++
T Consensus 167 v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 245 (357)
T 3i2n_A 167 CWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRW-ETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQH 245 (357)
T ss_dssp EEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEE
T ss_pred eEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceee-ecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCC
Confidence 99998 78899999999999999999999987644 457889999999999 99999999999999999998876
Q ss_pred EEEEee-----CCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCCC-------------------eEEEEeeCCCCCEE
Q psy14440 578 HVRLLT-----GHKAPVYALSFSVCGR-FLASAGGDGNVHMWDLSNG-------------------HLLTLLTGHTDVVR 632 (711)
Q Consensus 578 ~v~~~~-----~h~~~I~~la~spdg~-~Lasgs~Dg~I~iwDl~sg-------------------~~i~~l~~h~~~V~ 632 (711)
.+..+. +|...|++++|+|+++ +|++|+.||.|++||++++ +.+..+.+|.+.|+
T Consensus 246 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~ 325 (357)
T 3i2n_A 246 PTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPIS 325 (357)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEE
T ss_pred cccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCee
Confidence 654444 8999999999999998 8999999999999998754 46788899999999
Q ss_pred EEEEeCCCCEEE-EEeCCCcEEEEeCCCCC
Q psy14440 633 ALCFSRDGNILA-SSGQDCSVKLWDFAKLS 661 (711)
Q Consensus 633 sl~fspdg~~La-sgs~Dg~V~iWdl~~~~ 661 (711)
+++|+++|++|+ +|+.||.|+|||+.++.
T Consensus 326 ~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 326 SLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred EEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 999999999888 89999999999998753
No 37
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.5e-36 Score=329.30 Aligned_cols=275 Identities=18% Similarity=0.199 Sum_probs=237.0
Q ss_pred EEEEEecCCCceEEEEECCCC-CEEEEEeCCCeEEEEeCCCCcee-------------eeccCc-cccccccccCCcEEE
Q psy14440 379 ACYTLLNARQQVTCAEISEDV-SILAVGFSESYIKLWSLVPQKLK-------------AMKSSD-QLQDIEMECDDILVR 443 (711)
Q Consensus 379 ~~~tl~~h~~~V~~l~fs~dg-~~LatG~~dg~I~vWdl~~~~~~-------------~~~~~~-~~~~l~~~~~d~~i~ 443 (711)
...++.+|.+.|+|++|++++ ++||+|+.||.|+||++.+.+.. .+.+++ +...++.++.++.|+
T Consensus 65 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~ 144 (383)
T 3ei3_B 65 LHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATT 144 (383)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEE
T ss_pred eEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEE
Confidence 455788999999999999999 99999999999999999765432 233444 456788888999999
Q ss_pred EEecCCCeeEEEeecc---cCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCC-EEEE
Q psy14440 444 IMDERNAETTRTLVGH---EGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGY-YFAS 519 (711)
Q Consensus 444 i~d~~~~~~~~~l~~h---~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~-~l~s 519 (711)
+||..+ .....+..| ...|.+++|++++++|++|+.||.|++||+ +++.+..+.+|...|.+++|+|++. +|++
T Consensus 145 iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 222 (383)
T 3ei3_B 145 LRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMAT 222 (383)
T ss_dssp EEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEE
T ss_pred EEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEE
Confidence 999885 555555544 488999999999999999999999999999 5788899999999999999999998 9999
Q ss_pred EECCCeEEEEECCC----CceeEEeecCCCCeeEEEEcC-CCCEEEEEEcCCcEEEEECCCCcEEEEeeCCC--------
Q psy14440 520 AGHDRMARLWATDS----YHPLRLFVGHYSDVDCVQFHP-NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHK-------- 586 (711)
Q Consensus 520 gs~Dg~i~lwd~~~----~~~~~~~~~h~~~V~~v~~sp-~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~-------- 586 (711)
|+.|++|++||+++ +..+..+ +|...|.+++|+| ++++|++++.|+.|++||+++++.+..+.+|.
T Consensus 223 ~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 301 (383)
T 3ei3_B 223 SSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLT 301 (383)
T ss_dssp EETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSC
T ss_pred EeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccccccccc
Confidence 99999999999987 5566666 7999999999999 99999999999999999999988877776543
Q ss_pred ---------CCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeC--CCCCEEEEEEeCCCCEEEEEeCCCcEEEE
Q psy14440 587 ---------APVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTG--HTDVVRALCFSRDGNILASSGQDCSVKLW 655 (711)
Q Consensus 587 ---------~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~--h~~~V~sl~fspdg~~Lasgs~Dg~V~iW 655 (711)
+.+..++|+++|++ +|+.||.|+|||+.+++.+..+.+ |.+.+..++|+++|++|++|+ ||+|+||
T Consensus 302 ~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw 378 (383)
T 3ei3_B 302 PIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIW 378 (383)
T ss_dssp CCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEE
T ss_pred ceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEE
Confidence 34455677777776 778999999999999999999987 457788889999999999997 9999999
Q ss_pred eCCC
Q psy14440 656 DFAK 659 (711)
Q Consensus 656 dl~~ 659 (711)
|+++
T Consensus 379 ~~~~ 382 (383)
T 3ei3_B 379 NRED 382 (383)
T ss_dssp ECC-
T ss_pred ecCC
Confidence 9874
No 38
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-36 Score=325.54 Aligned_cols=250 Identities=24% Similarity=0.415 Sum_probs=217.4
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCE
Q psy14440 384 LNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPV 463 (711)
Q Consensus 384 ~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V 463 (711)
.+|...|++++|+|+|++||+|+.|+.|+||++... ..+....+.+|.+.|
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~-----------------------------~~~~~~~~~~h~~~v 108 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQD-----------------------------DFECVTTLEGHENEV 108 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC------------------------------EEEEEEECCCSSCE
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCC-----------------------------CeEEEEEccCCCCCc
Confidence 579999999999999999999999999999997532 123456788999999
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCC---eEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCc--eeE
Q psy14440 464 RKLSFSPDRSLLLSCSQDNTIRLWSLLLW---RCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYH--PLR 538 (711)
Q Consensus 464 ~~l~fspdg~~L~s~s~Dg~V~iwdl~t~---~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~--~~~ 538 (711)
++++|+|++++|++|+.|++|++||+.++ .++..+.+|...|.+++|+|++.+|++|+.|++|++||.+++. ...
T Consensus 109 ~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~ 188 (345)
T 3fm0_A 109 KSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCA 188 (345)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEE
T ss_pred eEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEE
Confidence 99999999999999999999999999765 4567788999999999999999999999999999999998775 456
Q ss_pred EeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCC---------------cEEEEeeC-CCCCeEEEEEecCCCEEE
Q psy14440 539 LFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTG---------------SHVRLLTG-HKAPVYALSFSVCGRFLA 602 (711)
Q Consensus 539 ~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~---------------~~v~~~~~-h~~~I~~la~spdg~~La 602 (711)
.+.+|...|.+++|+|++++|++|+.|++|+|||.... +++..+.+ |...|++++|++++..|+
T Consensus 189 ~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~ 268 (345)
T 3fm0_A 189 TLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALA 268 (345)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEE
T ss_pred EecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEE
Confidence 78899999999999999999999999999999996321 34555555 889999999999999999
Q ss_pred EEeCCCcEEEEECCCCe---------EEEEeeCCCCCEEEEEEeCCC-CEEEEEeCCCcEEEEeCCCCCC
Q psy14440 603 SAGGDGNVHMWDLSNGH---------LLTLLTGHTDVVRALCFSRDG-NILASSGQDCSVKLWDFAKLSD 662 (711)
Q Consensus 603 sgs~Dg~I~iwDl~sg~---------~i~~l~~h~~~V~sl~fspdg-~~Lasgs~Dg~V~iWdl~~~~~ 662 (711)
+++.|+.|++|+...+. ......+|.+.|++++|+|++ .+||+||.||+|++|++.....
T Consensus 269 s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~ 338 (345)
T 3fm0_A 269 TACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEG 338 (345)
T ss_dssp EEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC---
T ss_pred EEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCC
Confidence 99999999999987542 122346899999999999987 5999999999999999987543
No 39
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.5e-36 Score=316.46 Aligned_cols=250 Identities=23% Similarity=0.370 Sum_probs=225.4
Q ss_pred eEEEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEee
Q psy14440 378 IACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLV 457 (711)
Q Consensus 378 ~~~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~ 457 (711)
.+..++..|...|.+++|++++++|++|+.|+.|++||+. +++.+..+.
T Consensus 46 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~-------------------------------~~~~~~~~~ 94 (304)
T 2ynn_A 46 VEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN-------------------------------TGEKVVDFE 94 (304)
T ss_dssp EEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT-------------------------------TCCEEEEEE
T ss_pred ceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECC-------------------------------CCcEEEEEe
Confidence 3566788999999999999999999999999999999984 345567788
Q ss_pred cccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-eEEEEEecCCCCEEEEEEcC-CCCEEEEEECCCeEEEEECCCCc
Q psy14440 458 GHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLW-RCLVVYKGHGHPVWDIKFSP-HGYYFASAGHDRMARLWATDSYH 535 (711)
Q Consensus 458 ~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~-~~~~~~~~h~~~V~~v~~sp-~g~~l~sgs~Dg~i~lwd~~~~~ 535 (711)
+|.+.|++++|+|++.+|++|+.||+|++||+.++ .....+.+|...|.+++|+| ++.+|++|+.|++|++||+++..
T Consensus 95 ~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~ 174 (304)
T 2ynn_A 95 AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST 174 (304)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSS
T ss_pred CCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 99999999999999999999999999999999876 56678899999999999999 67899999999999999998877
Q ss_pred eeEEee-cCCCCeeEEEEcC--CCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy14440 536 PLRLFV-GHYSDVDCVQFHP--NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHM 612 (711)
Q Consensus 536 ~~~~~~-~h~~~V~~v~~sp--~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~i 612 (711)
....+. +|...+.+++|++ ++.+|++|+.|++|++||+++++++..+.+|...|.+++|+|++.+|++|+.||+|++
T Consensus 175 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~i 254 (304)
T 2ynn_A 175 PNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKI 254 (304)
T ss_dssp CSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred ccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEE
Confidence 665554 5668899999987 7789999999999999999999999999999999999999999999999999999999
Q ss_pred EECCCCeEEEEeeCCCCCEEEEEEeCCCC--EEEEEeCCCcEEEEeCCC
Q psy14440 613 WDLSNGHLLTLLTGHTDVVRALCFSRDGN--ILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 613 wDl~sg~~i~~l~~h~~~V~sl~fspdg~--~Lasgs~Dg~V~iWdl~~ 659 (711)
||+.+++.+..+..|...+++++|++++. ++++|+ |+.+.+|++.+
T Consensus 255 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~-~~g~~~~~~~~ 302 (304)
T 2ynn_A 255 WNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGF-DNGFTVLSLGN 302 (304)
T ss_dssp EETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEE-TTEEEEEECC-
T ss_pred EECCCCceeeeccCCCccEEEEEECCCCCceEEEEec-CCceEEEEecc
Confidence 99999999999999999999999999875 577766 55678888764
No 40
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=4.8e-36 Score=316.79 Aligned_cols=298 Identities=17% Similarity=0.268 Sum_probs=258.1
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCC-----------CceeeeccCccccccccccCCcEEEEEecCCCee-
Q psy14440 385 NARQQVTCAEISEDVSILAVGFSESYIKLWSLVP-----------QKLKAMKSSDQLQDIEMECDDILVRIMDERNAET- 452 (711)
Q Consensus 385 ~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~-----------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~- 452 (711)
.+.+.|.+++|++||++++++..++.+.+|.... ..+..+..+++...++.++ ++.+++|+..++..
T Consensus 7 ~~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~ 85 (337)
T 1gxr_A 7 MGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNK 85 (337)
T ss_dssp EEEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCC
T ss_pred ccCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCce
Confidence 4567899999999999999998777666654432 2344556666777777777 99999999876543
Q ss_pred --EEEee--cccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe--EEEEEecCCCCEEEEEEcCCCCEEEEEECCCeE
Q psy14440 453 --TRTLV--GHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWR--CLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMA 526 (711)
Q Consensus 453 --~~~l~--~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~--~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i 526 (711)
...+. +|.+.|.+++|++++++|++++.||.|++||+.+++ ....+..|...|++++|+++++++++++.||.|
T Consensus 86 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v 165 (337)
T 1gxr_A 86 SPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNI 165 (337)
T ss_dssp SCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred eeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcE
Confidence 23333 799999999999999999999999999999999877 667788899999999999999999999999999
Q ss_pred EEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeC
Q psy14440 527 RLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGG 606 (711)
Q Consensus 527 ~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~ 606 (711)
++||+++++.+..+.+|...|.+++|+|++++|++++.||.|++||+++++.+..+. +...+.+++|+++|++|++++.
T Consensus 166 ~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~ 244 (337)
T 1gxr_A 166 AVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGME 244 (337)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEET
T ss_pred EEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcC
Confidence 999999999999999999999999999999999999999999999999999888775 7888999999999999999999
Q ss_pred CCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCCccCcccccccccccccccccccee
Q psy14440 607 DGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLV 686 (711)
Q Consensus 607 Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 686 (711)
||.|++||+.+++.. .+..|.+.|.+++|++++++|++++.||.|++||+..... +
T Consensus 245 ~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~-----------------------~ 300 (337)
T 1gxr_A 245 SSNVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGAS-----------------------I 300 (337)
T ss_dssp TSCEEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE-----------------------E
T ss_pred CCcEEEEECCCCCeE-EEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeE-----------------------E
Confidence 999999999988764 6778999999999999999999999999999999875321 1
Q ss_pred eecccCCcceEEEEEccCCeeee
Q psy14440 687 RSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 687 ~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
....+..+|.+++|++++.+|+
T Consensus 301 -~~~~~~~~v~~~~~s~~~~~l~ 322 (337)
T 1gxr_A 301 -FQSKESSSVLSCDISVDDKYIV 322 (337)
T ss_dssp -EEEECSSCEEEEEECTTSCEEE
T ss_pred -EEecCCCcEEEEEECCCCCEEE
Confidence 1123578899999999998887
No 41
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-35 Score=311.26 Aligned_cols=273 Identities=25% Similarity=0.355 Sum_probs=246.0
Q ss_pred eEEEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCc-----------eeeeccCccccccccccCCcEEEEEe
Q psy14440 378 IACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK-----------LKAMKSSDQLQDIEMECDDILVRIMD 446 (711)
Q Consensus 378 ~~~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~-----------~~~~~~~~~~~~l~~~~~d~~i~i~d 446 (711)
....++.+|.+.|+|++| +++++||+|+.||.|++|++.+.+ +..+..+++...++.++.++.+++|+
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~ 87 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVP 87 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 456778999999999999 999999999999999999997654 23345566677888999999999998
Q ss_pred cCCC---eeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcC-CCCEEEEEEC
Q psy14440 447 ERNA---ETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSP-HGYYFASAGH 522 (711)
Q Consensus 447 ~~~~---~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp-~g~~l~sgs~ 522 (711)
.... +....+.+|.+.|.+++| ++++|++++.||.|++|| .++....+..|...|.+++|++ ++.++++++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 163 (313)
T 3odt_A 88 LFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASA 163 (313)
T ss_dssp TTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEET
T ss_pred eeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEEC
Confidence 7543 567788999999999999 678999999999999999 6788889999999999999998 8999999999
Q ss_pred CCeEEEEECCCCceeEEeec-CCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEE
Q psy14440 523 DRMARLWATDSYHPLRLFVG-HYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFL 601 (711)
Q Consensus 523 Dg~i~lwd~~~~~~~~~~~~-h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~L 601 (711)
||.|++|| ..+....+.. |...|.+++|++++. +++|+.||.|++||+++++.+..+.+|.+.|++++|+++| .|
T Consensus 164 d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l 239 (313)
T 3odt_A 164 DKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DI 239 (313)
T ss_dssp TSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CE
T ss_pred CCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CE
Confidence 99999999 4566777777 899999999999988 9999999999999999999999999999999999999999 58
Q ss_pred EEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q psy14440 602 ASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKL 660 (711)
Q Consensus 602 asgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~ 660 (711)
++|+.||.|++||+.+++.+..+..|...|.+++|+++++ +++++.||.|++||+.+.
T Consensus 240 ~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 240 VSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKS 297 (313)
T ss_dssp EEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGG
T ss_pred EEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCC
Confidence 8999999999999999999999999999999999999998 667999999999999764
No 42
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=6.4e-36 Score=315.57 Aligned_cols=252 Identities=21% Similarity=0.334 Sum_probs=225.8
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccC
Q psy14440 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEG 461 (711)
Q Consensus 382 tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~ 461 (711)
.+.+|.+.|+|++|++++++||+|+.||.|+||++.+.. ...+....+.+|.+
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~---------------------------~~~~~~~~~~~~~~ 58 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDT---------------------------SNWELSDSWRAHDS 58 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSS---------------------------CCEEEEEEEECCSS
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCC---------------------------CcceecceeccCCC
Confidence 357899999999999999999999999999999986422 11234567789999
Q ss_pred CEEEEEEcC--CCCEEEEEeCCCeEEEEECCCC---------eEEEEEecCCCCEEEEEEcCC--CCEEEEEECCCeEEE
Q psy14440 462 PVRKLSFSP--DRSLLLSCSQDNTIRLWSLLLW---------RCLVVYKGHGHPVWDIKFSPH--GYYFASAGHDRMARL 528 (711)
Q Consensus 462 ~V~~l~fsp--dg~~L~s~s~Dg~V~iwdl~t~---------~~~~~~~~h~~~V~~v~~sp~--g~~l~sgs~Dg~i~l 528 (711)
.|++++|++ ++++|++|+.||+|++||+.++ +.+..+.+|...|++++|+++ +.+|++++.||.|++
T Consensus 59 ~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~i 138 (351)
T 3f3f_A 59 SIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRL 138 (351)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEE
T ss_pred cEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEE
Confidence 999999999 6999999999999999999876 678889999999999999999 999999999999999
Q ss_pred EECCCCceeEEee-------------cCCCCeeEEEEcCC---CCEEEEEEcCCcEEEEECCCCcE--EEEeeCCCCCeE
Q psy14440 529 WATDSYHPLRLFV-------------GHYSDVDCVQFHPN---SNYVATGSSDRTIRLWDCVTGSH--VRLLTGHKAPVY 590 (711)
Q Consensus 529 wd~~~~~~~~~~~-------------~h~~~V~~v~~sp~---~~~latgs~Dg~I~iwD~~~~~~--v~~~~~h~~~I~ 590 (711)
||+++++.+..+. +|...+.+++|+|+ +.++++++.|+.+.+|+...++. +..+.+|...|+
T Consensus 139 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~ 218 (351)
T 3f3f_A 139 YDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIR 218 (351)
T ss_dssp EECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEE
T ss_pred ecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCccee
Confidence 9999877554433 68889999999997 99999999999999998888765 677889999999
Q ss_pred EEEEecCC----CEEEEEeCCCcEEEEECCCC----------------------------------------------eE
Q psy14440 591 ALSFSVCG----RFLASAGGDGNVHMWDLSNG----------------------------------------------HL 620 (711)
Q Consensus 591 ~la~spdg----~~Lasgs~Dg~I~iwDl~sg----------------------------------------------~~ 620 (711)
+++|+|++ ++|++|+.||.|++||++++ +.
T Consensus 219 ~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (351)
T 3f3f_A 219 SISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVEL 298 (351)
T ss_dssp EEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEE
T ss_pred EEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccE
Confidence 99999998 89999999999999999875 67
Q ss_pred EEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q psy14440 621 LTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKL 660 (711)
Q Consensus 621 i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~ 660 (711)
+..+.+|.+.|++++|++++++|++|+.||.|+|||+...
T Consensus 299 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~ 338 (351)
T 3f3f_A 299 LSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYS 338 (351)
T ss_dssp EEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTT
T ss_pred EEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcC
Confidence 7888899999999999999999999999999999999863
No 43
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.4e-35 Score=312.69 Aligned_cols=268 Identities=24% Similarity=0.468 Sum_probs=243.4
Q ss_pred CceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEE
Q psy14440 419 QKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498 (711)
Q Consensus 419 ~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~ 498 (711)
..+..+.++++...++.++.++.+++|+..+++....+.+|...|.+++|++++++|++|+.||+|++||+.+++++..+
T Consensus 24 ~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~ 103 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL 103 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEE
Confidence 34555666777788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcE
Q psy14440 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH 578 (711)
Q Consensus 499 ~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~ 578 (711)
.+|...|.+++|+|++++|++|+.|++|++||+++++.+..+..|...|.+++|++++++|++|+.||.|++||+++++.
T Consensus 104 ~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~ 183 (312)
T 4ery_A 104 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 183 (312)
T ss_dssp ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EEEee-CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEE--EEEe-CCCCEEEEEeCCCcEEE
Q psy14440 579 VRLLT-GHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRA--LCFS-RDGNILASSGQDCSVKL 654 (711)
Q Consensus 579 v~~~~-~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~s--l~fs-pdg~~Lasgs~Dg~V~i 654 (711)
+..+. .+...+.+++|+|+|++|++++.||.|++||+.+++.+..+.+|...+.. ..|+ +++.+|++|+.||.|++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~v 263 (312)
T 4ery_A 184 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 263 (312)
T ss_dssp EEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEE
T ss_pred eeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEE
Confidence 87764 56678999999999999999999999999999999999999988764322 2344 67889999999999999
Q ss_pred EeCCCCCCccCccccccccccccccccccceeeecccCCcceEEEEEccCCeeee
Q psy14440 655 WDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 655 Wdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
||+.+ ..++..+..|...|.+++|++++.+||
T Consensus 264 wd~~~-----------------------~~~~~~~~~h~~~v~~~~~~p~~~~l~ 295 (312)
T 4ery_A 264 WNLQT-----------------------KEIVQKLQGHTDVVISTACHPTENIIA 295 (312)
T ss_dssp EETTT-----------------------CCEEEEECCCSSCEEEEEECSSSSEEE
T ss_pred EECCC-----------------------chhhhhhhccCCcEEEEeecCcCCceE
Confidence 99864 234566888999999999999999887
No 44
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3.1e-37 Score=327.41 Aligned_cols=249 Identities=24% Similarity=0.343 Sum_probs=211.9
Q ss_pred EEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeeccc
Q psy14440 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHE 460 (711)
Q Consensus 381 ~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~ 460 (711)
..+.+|.+.|++++|+++|++||+|+.|++|+|||+.+.. ......+.+|.
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~-----------------------------~~~~~~l~gH~ 57 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGG-----------------------------QILIADLRGHE 57 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTE-----------------------------EEEEEEEECCS
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCC-----------------------------cEEEEEEcCCC
Confidence 3467899999999999999999999999999999974321 12356788999
Q ss_pred CCEEEEEEcC--CCCEEEEEeCCCeEEEEECCCC--eEEEEEecCCCCEEEEEEcCC--CCEEEEEECCCeEEEEECCCC
Q psy14440 461 GPVRKLSFSP--DRSLLLSCSQDNTIRLWSLLLW--RCLVVYKGHGHPVWDIKFSPH--GYYFASAGHDRMARLWATDSY 534 (711)
Q Consensus 461 ~~V~~l~fsp--dg~~L~s~s~Dg~V~iwdl~t~--~~~~~~~~h~~~V~~v~~sp~--g~~l~sgs~Dg~i~lwd~~~~ 534 (711)
+.|++++|++ ++++|++|+.|++|++||+.++ .....+.+|...|++++|+|+ +.+|++|+.|++|++||++..
T Consensus 58 ~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~ 137 (316)
T 3bg1_A 58 GPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGE 137 (316)
T ss_dssp SCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSS
T ss_pred ccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCC
Confidence 9999999986 4899999999999999999876 466778899999999999997 789999999999999999876
Q ss_pred ce---eEEeecCCCCeeEEEEcCC-----------------CCEEEEEEcCCcEEEEECCCC---cEEEEeeCCCCCeEE
Q psy14440 535 HP---LRLFVGHYSDVDCVQFHPN-----------------SNYVATGSSDRTIRLWDCVTG---SHVRLLTGHKAPVYA 591 (711)
Q Consensus 535 ~~---~~~~~~h~~~V~~v~~sp~-----------------~~~latgs~Dg~I~iwD~~~~---~~v~~~~~h~~~I~~ 591 (711)
.. ...+.+|...|.+++|+|+ +++|++|+.|++|++||++.+ +.+..+.+|...|.+
T Consensus 138 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~ 217 (316)
T 3bg1_A 138 GQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRD 217 (316)
T ss_dssp SCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEE
T ss_pred CCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEE
Confidence 32 3456789999999999997 478999999999999999765 467788899999999
Q ss_pred EEEecCC----CEEEEEeCCCcEEEEECCCC---e-EEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCC
Q psy14440 592 LSFSVCG----RFLASAGGDGNVHMWDLSNG---H-LLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFA 658 (711)
Q Consensus 592 la~spdg----~~Lasgs~Dg~I~iwDl~sg---~-~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~ 658 (711)
++|+|++ ++|++|+.||+|+|||+.++ + ....+..|.+.|++++|+|+|++|++|+.||+|+||+..
T Consensus 218 v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 218 VAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred EEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 9999987 89999999999999998762 1 223456788999999999999999999999999999975
No 45
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.6e-36 Score=321.10 Aligned_cols=251 Identities=25% Similarity=0.369 Sum_probs=223.2
Q ss_pred EEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecc
Q psy14440 380 CYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGH 459 (711)
Q Consensus 380 ~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h 459 (711)
..++.+|.+.|++++|++++++||+|+.||.|+||++.. .+......+.+|
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~-----------------------------~~~~~~~~~~~h 54 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEG-----------------------------ETHKLIDTLTGH 54 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEET-----------------------------TEEEEEEEECCC
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCC-----------------------------CcceeeeEecCC
Confidence 345789999999999999999999999999999999842 233456778899
Q ss_pred cCCEEEEEEcCC--CCEEEEEeCCCeEEEEECCCCe--EEEEEecCCCCEEEEEEcCC--CCEEEEEECCCeEEEEECCC
Q psy14440 460 EGPVRKLSFSPD--RSLLLSCSQDNTIRLWSLLLWR--CLVVYKGHGHPVWDIKFSPH--GYYFASAGHDRMARLWATDS 533 (711)
Q Consensus 460 ~~~V~~l~fspd--g~~L~s~s~Dg~V~iwdl~t~~--~~~~~~~h~~~V~~v~~sp~--g~~l~sgs~Dg~i~lwd~~~ 533 (711)
.+.|++++|+++ +++|++|+.||+|++||+.+++ .+..+.+|...|++++|+++ +.+|++++.||.|++||++.
T Consensus 55 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 134 (379)
T 3jrp_A 55 EGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKE 134 (379)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCT
T ss_pred CCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCC
Confidence 999999999987 9999999999999999999887 77888889999999999999 99999999999999999988
Q ss_pred Cc--eeEEeecCCCCeeEEEEcC-------------CCCEEEEEEcCCcEEEEECCCCc----EEEEeeCCCCCeEEEEE
Q psy14440 534 YH--PLRLFVGHYSDVDCVQFHP-------------NSNYVATGSSDRTIRLWDCVTGS----HVRLLTGHKAPVYALSF 594 (711)
Q Consensus 534 ~~--~~~~~~~h~~~V~~v~~sp-------------~~~~latgs~Dg~I~iwD~~~~~----~v~~~~~h~~~I~~la~ 594 (711)
.. ....+.+|...|.+++|+| ++.+|++|+.||.|++||++++. .+..+.+|...|++++|
T Consensus 135 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~ 214 (379)
T 3jrp_A 135 NGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 214 (379)
T ss_dssp TSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred CCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEE
Confidence 73 4456778999999999999 69999999999999999998764 45677889999999999
Q ss_pred ecC---CCEEEEEeCCCcEEEEECCCCe---EEEEe--eCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 595 SVC---GRFLASAGGDGNVHMWDLSNGH---LLTLL--TGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 595 spd---g~~Lasgs~Dg~I~iwDl~sg~---~i~~l--~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
+|+ +++|++|+.||.|++||+.++. ....+ ..|...|++++|+++|++|++++.||.|++||+..
T Consensus 215 sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 215 SPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp CCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred CCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 999 8999999999999999998864 22333 34888999999999999999999999999999974
No 46
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=9.7e-36 Score=319.70 Aligned_cols=246 Identities=19% Similarity=0.272 Sum_probs=222.8
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCE
Q psy14440 384 LNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPV 463 (711)
Q Consensus 384 ~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V 463 (711)
..|.+.|++++|++++++||+|+.|+.|++|++.+.+ .+....+.+|.+.|
T Consensus 5 ~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~-----------------------------~~~~~~~~~h~~~v 55 (372)
T 1k8k_C 5 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNK-----------------------------WVQVHELKEHNGQV 55 (372)
T ss_dssp ESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTE-----------------------------EEEEEEEECCSSCE
T ss_pred cccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCc-----------------------------EEeeeeecCCCCcc
Confidence 3488999999999999999999999999999975321 12566778999999
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEE--ecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCce----e
Q psy14440 464 RKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY--KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHP----L 537 (711)
Q Consensus 464 ~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~--~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~----~ 537 (711)
++++|++++++|++++.||+|++||+.+++....+ ..|...|.+++|++++++|++++.|+.|++||++.... .
T Consensus 56 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~ 135 (372)
T 1k8k_C 56 TGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCK 135 (372)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEE
T ss_pred cEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeee
Confidence 99999999999999999999999999888765544 56899999999999999999999999999999988763 2
Q ss_pred EEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEEC------------------CCCcEEEEeeCCCCCeEEEEEecCCC
Q psy14440 538 RLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC------------------VTGSHVRLLTGHKAPVYALSFSVCGR 599 (711)
Q Consensus 538 ~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~------------------~~~~~v~~~~~h~~~I~~la~spdg~ 599 (711)
....+|...|.+++|+|++++|++|+.||.|++||+ .+++.+..+.+|...|.+++|+++|+
T Consensus 136 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 215 (372)
T 1k8k_C 136 HIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGS 215 (372)
T ss_dssp EECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSS
T ss_pred eeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCC
Confidence 333578999999999999999999999999999995 46888999999999999999999999
Q ss_pred EEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 600 FLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 600 ~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
+|++++.||.|++||+++++.+..+..|...|.+++|++++.+|++| .||.|++||+..
T Consensus 216 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 216 RVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred EEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 99999999999999999999999999999999999999999988877 899999999976
No 47
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=6e-35 Score=335.19 Aligned_cols=306 Identities=16% Similarity=0.247 Sum_probs=269.3
Q ss_pred eEEEEEecCCCc-eEEEEECC--CCCEEEEEeCCCeEEEEeCCCC-------------------ceeeeccCcccccccc
Q psy14440 378 IACYTLLNARQQ-VTCAEISE--DVSILAVGFSESYIKLWSLVPQ-------------------KLKAMKSSDQLQDIEM 435 (711)
Q Consensus 378 ~~~~tl~~h~~~-V~~l~fs~--dg~~LatG~~dg~I~vWdl~~~-------------------~~~~~~~~~~~~~l~~ 435 (711)
.....+.+|.+. |++++|+| |+++||+|+.||.|+||++.+. .+..+.++++...++.
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 133 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCV 133 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEE
Confidence 356778899999 99999999 9999999999999999999532 1233445566666777
Q ss_pred ccCC----cEEEEEecCCCeeEEEeecccCCEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCeEEEEEecCCC---CEEE
Q psy14440 436 ECDD----ILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRS-LLLSCSQDNTIRLWSLLLWRCLVVYKGHGH---PVWD 507 (711)
Q Consensus 436 ~~~d----~~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~-~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~---~V~~ 507 (711)
++.+ +.+.+|| .++....+.+|.+.|++++|+++++ .|++++.|+.|++||+.+++.+..+.+|.. .|++
T Consensus 134 ~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~ 211 (615)
T 1pgu_A 134 VGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRD 211 (615)
T ss_dssp EECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEE
T ss_pred eccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEE
Confidence 6665 7888888 6678889999999999999999998 899999999999999999999999999999 9999
Q ss_pred EEEcCC-CCEEEEEECCCeEEEEECCCCceeEEe-e---cCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEE-
Q psy14440 508 IKFSPH-GYYFASAGHDRMARLWATDSYHPLRLF-V---GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRL- 581 (711)
Q Consensus 508 v~~sp~-g~~l~sgs~Dg~i~lwd~~~~~~~~~~-~---~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~- 581 (711)
++|+|+ +++|++++.||.|++||+++++.+..+ . +|...|.+++|+ ++++|++++.||.|++||+.+++.+..
T Consensus 212 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~ 290 (615)
T 1pgu_A 212 VEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKW 290 (615)
T ss_dssp EEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEE
Confidence 999999 999999999999999999999999988 6 899999999999 999999999999999999875432221
Q ss_pred --------------------------------------------------------------------------------
Q psy14440 582 -------------------------------------------------------------------------------- 581 (711)
Q Consensus 582 -------------------------------------------------------------------------------- 581 (711)
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~ 370 (615)
T 1pgu_A 291 TLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQD 370 (615)
T ss_dssp ECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECC
T ss_pred cCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCc
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q psy14440 582 -------------------------------------------------------------------------------- 581 (711)
Q Consensus 582 -------------------------------------------------------------------------------- 581 (711)
T Consensus 371 ~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (615)
T 1pgu_A 371 HSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGS 450 (615)
T ss_dssp CCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEE
T ss_pred ccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCce
Confidence
Q ss_pred ---------------------------------eeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeC-C
Q psy14440 582 ---------------------------------LTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTG-H 627 (711)
Q Consensus 582 ---------------------------------~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~-h 627 (711)
+.+|...|++++|+|+|++|++|+.||.|++||+.+++.+..+.+ |
T Consensus 451 ~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h 530 (615)
T 1pgu_A 451 AVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFR 530 (615)
T ss_dssp EEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCC
T ss_pred EEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCC
Confidence 123556788999999999999999999999999999999999988 9
Q ss_pred CCCEEEEEEeC----------CCCEEEEEeCCCcEEEEeCCCCCCccCccccccccccccccccccceeeecccCCcceE
Q psy14440 628 TDVVRALCFSR----------DGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLL 697 (711)
Q Consensus 628 ~~~V~sl~fsp----------dg~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~ 697 (711)
...|++++|++ ++++|++|+.||+|++||+.... .++..+..|..+|.
T Consensus 531 ~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~----------------------~~~~~~~~h~~~v~ 588 (615)
T 1pgu_A 531 TSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM----------------------KIIKALNAHKDGVN 588 (615)
T ss_dssp SSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTT----------------------CCEEETTSSTTCEE
T ss_pred CCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCc----------------------eechhhhcCccceE
Confidence 99999999999 99999999999999999996521 34556888999999
Q ss_pred EEEEccCCeeee
Q psy14440 698 HLIFSRRNILLR 709 (711)
Q Consensus 698 ~v~Fs~~n~lla 709 (711)
+|+|++++. |+
T Consensus 589 ~l~~s~~~~-l~ 599 (615)
T 1pgu_A 589 NLLWETPST-LV 599 (615)
T ss_dssp EEEEEETTE-EE
T ss_pred EEEEcCCCC-eE
Confidence 999999998 65
No 48
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=4.6e-35 Score=324.85 Aligned_cols=294 Identities=27% Similarity=0.458 Sum_probs=259.2
Q ss_pred EEEecCCCce-EEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccC---------ccccccccccCCcEEEEEecCCC
Q psy14440 381 YTLLNARQQV-TCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSS---------DQLQDIEMECDDILVRIMDERNA 450 (711)
Q Consensus 381 ~tl~~h~~~V-~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~---------~~~~~l~~~~~d~~i~i~d~~~~ 450 (711)
..+.+|.+.| +|+. .+|++||+|+.||.|++||+.+.+....... .....++.++.++.|++||..++
T Consensus 112 ~~l~~h~~~v~~~~~--~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~ 189 (445)
T 2ovr_B 112 KVLKGHDDHVITCLQ--FCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETG 189 (445)
T ss_dssp EEEECSTTSCEEEEE--EETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETTEEEEEETTSCEEEEETTTT
T ss_pred EEecccCCCcEEEEE--EcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecCCEEEEEeCCCeEEEEECCcC
Confidence 4578898875 5544 4689999999999999999987654322111 12346778889999999999999
Q ss_pred eeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEE
Q psy14440 451 ETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWA 530 (711)
Q Consensus 451 ~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd 530 (711)
+....+.+|.+.|.+++|+ ++.|++|+.||+|++||+.+++.+..+.+|...|.+++| ++.++++|+.||.|++||
T Consensus 190 ~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd 265 (445)
T 2ovr_B 190 ECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD 265 (445)
T ss_dssp EEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEE
T ss_pred cEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEE
Confidence 9999999999999999995 678999999999999999999999999999999999999 688999999999999999
Q ss_pred CCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcE
Q psy14440 531 TDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNV 610 (711)
Q Consensus 531 ~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I 610 (711)
+++++.+..+.+|...|.+++| ++.++++|+.||+|++||+++++.+..+.+|...+.+++++ +++|++|+.||.|
T Consensus 266 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i 341 (445)
T 2ovr_B 266 PETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTV 341 (445)
T ss_dssp GGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCE
T ss_pred CCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeE
Confidence 9999999999999999999999 78999999999999999999999999999999999988875 7799999999999
Q ss_pred EEEECCCCeEEEEeeC---CCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCCccCccccccccccccccccccceee
Q psy14440 611 HMWDLSNGHLLTLLTG---HTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVR 687 (711)
Q Consensus 611 ~iwDl~sg~~i~~l~~---h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 687 (711)
++||+.+++.+..+.+ |...|++++|+ +++|++|+.||+|++||+.+.. .+.
T Consensus 342 ~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~-----------------------~~~ 396 (445)
T 2ovr_B 342 KIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGE-----------------------FIR 396 (445)
T ss_dssp EEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCC-----------------------EEE
T ss_pred EEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCc-----------------------eee
Confidence 9999999999999986 88899999995 7899999999999999987532 122
Q ss_pred ec-----ccCCcceEEEEEccCCeeee
Q psy14440 688 SY-----KTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 688 ~~-----~t~~~pV~~v~Fs~~n~lla 709 (711)
.+ ..+..+|.+++|++++.++|
T Consensus 397 ~~~~~~~~~~~~~v~~~~~s~~~~~la 423 (445)
T 2ovr_B 397 NLVTLESGGSGGVVWRIRASNTKLVCA 423 (445)
T ss_dssp EEEECTTGGGTCEEEEEEECSSEEEEE
T ss_pred eeeccccCCCCceEEEEEecCCEEEEE
Confidence 22 45678999999999999988
No 49
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.4e-36 Score=325.23 Aligned_cols=229 Identities=22% Similarity=0.274 Sum_probs=200.2
Q ss_pred eecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEE----EecCCCCEEEEEEcCCCCEEEEEECCCeEEEEEC
Q psy14440 456 LVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV----YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWAT 531 (711)
Q Consensus 456 l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~----~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~ 531 (711)
...|...|++++|++++ .|++|+.||+|+|||+.+++.+.. ..+|...|++++|+|+|++|++|+.|++|++||+
T Consensus 78 ~~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~ 156 (344)
T 4gqb_B 78 GVQTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDL 156 (344)
T ss_dssp EEEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred eeccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 34467789999999985 788999999999999998765443 4589999999999999999999999999999999
Q ss_pred CCCceeEEeecCCCCeeEEEEcCCC-CEEEEEEcCCcEEEEECCCCcEEEEee--CCCCCeEEEEEec-CCCEEEEEeCC
Q psy14440 532 DSYHPLRLFVGHYSDVDCVQFHPNS-NYVATGSSDRTIRLWDCVTGSHVRLLT--GHKAPVYALSFSV-CGRFLASAGGD 607 (711)
Q Consensus 532 ~~~~~~~~~~~h~~~V~~v~~sp~~-~~latgs~Dg~I~iwD~~~~~~v~~~~--~h~~~I~~la~sp-dg~~Lasgs~D 607 (711)
++++.+..+.+|...|.+++|++++ .+|++|+.|++|++||+++++.+..+. .|...+++++|+| ++++|++|+.|
T Consensus 157 ~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d 236 (344)
T 4gqb_B 157 AQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN 236 (344)
T ss_dssp TTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETT
T ss_pred CCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccC
Confidence 9999999999999999999999987 478999999999999999999988875 4566799999998 46789999999
Q ss_pred CcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCC-CEEEEEeCCCcEEEEeCCCCCCccCcccccccccccccccccccee
Q psy14440 608 GNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDG-NILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLV 686 (711)
Q Consensus 608 g~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg-~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 686 (711)
|.|+|||+++++.+..+.+|.+.|++++|+|+| ++|++|+.||+|+|||+... . +
T Consensus 237 g~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~-----------------------~-~ 292 (344)
T 4gqb_B 237 GTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS-----------------------E-L 292 (344)
T ss_dssp SEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC-----------------------E-E
T ss_pred CcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC-----------------------c-E
Confidence 999999999999999999999999999999998 58999999999999998641 1 2
Q ss_pred eecccCCcceEEEEEccCCe-eee
Q psy14440 687 RSYKTKASPLLHLIFSRRNI-LLR 709 (711)
Q Consensus 687 ~~~~t~~~pV~~v~Fs~~n~-lla 709 (711)
..+..|...|.+|+|++++. +||
T Consensus 293 ~~~~~H~~~V~~v~~sp~~~~lla 316 (344)
T 4gqb_B 293 FRSQAHRDFVRDATWSPLNHSLLT 316 (344)
T ss_dssp EEECCCSSCEEEEEECSSSTTEEE
T ss_pred EEEcCCCCCEEEEEEeCCCCeEEE
Confidence 23567899999999999875 555
No 50
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.3e-35 Score=351.25 Aligned_cols=281 Identities=23% Similarity=0.347 Sum_probs=257.5
Q ss_pred EEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCc-----------eeeeccCccccccccccCCcEEEEEecC
Q psy14440 380 CYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK-----------LKAMKSSDQLQDIEMECDDILVRIMDER 448 (711)
Q Consensus 380 ~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~-----------~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 448 (711)
..++.+|.+.|+|++|||||++||+|+.||.|+||++.+++ +..+.++++...+++++.++.|++||..
T Consensus 6 ~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~ 85 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN 85 (814)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT
T ss_pred ceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 45788999999999999999999999999999999987653 3345566777889999999999999999
Q ss_pred CCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-eEEEEEecCCCCEEEEEEcC-CCCEEEEEECCCeE
Q psy14440 449 NAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLW-RCLVVYKGHGHPVWDIKFSP-HGYYFASAGHDRMA 526 (711)
Q Consensus 449 ~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~-~~~~~~~~h~~~V~~v~~sp-~g~~l~sgs~Dg~i 526 (711)
+++....+.+|.+.|++++|++++++|++|+.||+|++||+.++ .....+.+|...|.+++|+| ++..|++++.||+|
T Consensus 86 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v 165 (814)
T 3mkq_A 86 TGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTV 165 (814)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEE
T ss_pred CCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeE
Confidence 99999999999999999999999999999999999999999886 77888999999999999999 88999999999999
Q ss_pred EEEECCCCceeEEeecCC-CCeeEEEEcC--CCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEE
Q psy14440 527 RLWATDSYHPLRLFVGHY-SDVDCVQFHP--NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLAS 603 (711)
Q Consensus 527 ~lwd~~~~~~~~~~~~h~-~~V~~v~~sp--~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Las 603 (711)
++||+.++.....+..+. ..+.+++|+| ++.+|++|+.||+|++||+.+++.+..+.+|...|.+++|+|+|++|++
T Consensus 166 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 245 (814)
T 3mkq_A 166 KVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIIS 245 (814)
T ss_dssp EEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEE
T ss_pred EEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEE
Confidence 999999888877777655 8899999999 9999999999999999999999999999999999999999999999999
Q ss_pred EeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCC--EEEEEeCCCcEEEEeCCCCC
Q psy14440 604 AGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGN--ILASSGQDCSVKLWDFAKLS 661 (711)
Q Consensus 604 gs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~--~Lasgs~Dg~V~iWdl~~~~ 661 (711)
|+.||.|++||+.+++.+..+..|...|++++|+++|. ++++ +.|+.+.+|++....
T Consensus 246 ~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 304 (814)
T 3mkq_A 246 GSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIAS-GFDNGFTVLSLGNDE 304 (814)
T ss_dssp EETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEE-EETTEEEEEECSCCS
T ss_pred EeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEE-EeCCCEEEEEcCCCC
Confidence 99999999999999999999999999999999999987 4554 457789999987643
No 51
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.1e-35 Score=371.13 Aligned_cols=334 Identities=21% Similarity=0.306 Sum_probs=281.9
Q ss_pred CceEEEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCc-----------eeeeccCccccccccccCCcEEEE
Q psy14440 376 PSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK-----------LKAMKSSDQLQDIEMECDDILVRI 444 (711)
Q Consensus 376 ps~~~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~-----------~~~~~~~~~~~~l~~~~~d~~i~i 444 (711)
.......+.+|.+.|+|++||+||++||+|+.||.|+||++.+.+ +..+.++++...+++++.++.|++
T Consensus 604 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~v 683 (1249)
T 3sfz_A 604 KNLSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKI 683 (1249)
T ss_dssp SCCCSEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred cccceEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEE
Confidence 345566789999999999999999999999999999999997654 334556677788899999999999
Q ss_pred EecCCCeeEEEeecccCCEEEEEEcC--CCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEEC
Q psy14440 445 MDERNAETTRTLVGHEGPVRKLSFSP--DRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGH 522 (711)
Q Consensus 445 ~d~~~~~~~~~l~~h~~~V~~l~fsp--dg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~ 522 (711)
||..+++....+.+|.+.|.+++|++ ++.++++|+.||+|++||+.+++++..+.+|...|++++|+|++.++++|+.
T Consensus 684 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~ 763 (1249)
T 3sfz_A 684 WDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSA 763 (1249)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEES
T ss_pred EECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEEC
Confidence 99999999999999999999999999 5568999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEECCCCceeEEe-------------------------------------------------------ecCCCCe
Q psy14440 523 DRMARLWATDSYHPLRLF-------------------------------------------------------VGHYSDV 547 (711)
Q Consensus 523 Dg~i~lwd~~~~~~~~~~-------------------------------------------------------~~h~~~V 547 (711)
||+|++||+.++.....+ .+|...|
T Consensus 764 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v 843 (1249)
T 3sfz_A 764 DGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTI 843 (1249)
T ss_dssp SSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCC
T ss_pred CCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCce
Confidence 999999998765433222 1678889
Q ss_pred eEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECC-----------
Q psy14440 548 DCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLS----------- 616 (711)
Q Consensus 548 ~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~----------- 616 (711)
.+++|+|+++++++|+.||+|++||+.++..+..+.+|.+.|++++|+++|++|++++.||.|++||+.
T Consensus 844 ~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~ 923 (1249)
T 3sfz_A 844 QYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLK 923 (1249)
T ss_dssp CEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEE
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeeccc
Confidence 999999999999999999999999999999999999999999999999999999999999888888742
Q ss_pred --------------------------------------------------------------------CCeEEEEeeCCC
Q psy14440 617 --------------------------------------------------------------------NGHLLTLLTGHT 628 (711)
Q Consensus 617 --------------------------------------------------------------------sg~~i~~l~~h~ 628 (711)
+++.+..+.+|.
T Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~ 1003 (1249)
T 3sfz_A 924 QEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHK 1003 (1249)
T ss_dssp EEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCS
T ss_pred ceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCC
Confidence 234445566788
Q ss_pred CCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCCccCcccc------c-----------cccccccccccccceeeeccc
Q psy14440 629 DVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEV------N-----------LSHSADIKNSSLAYLVRSYKT 691 (711)
Q Consensus 629 ~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~------~-----------~~~~~~~~~~~~~~~l~~~~t 691 (711)
+.|++++|+++|++|++|+.||+|++||+.+.......... . ......++.......+..+..
T Consensus 1004 ~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 1083 (1249)
T 3sfz_A 1004 KAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTC 1083 (1249)
T ss_dssp SCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEEC
T ss_pred CceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcc
Confidence 99999999999999999999999999999874332111000 0 000111222334556677888
Q ss_pred CCcceEEEEEccCCeeee
Q psy14440 692 KASPLLHLIFSRRNILLR 709 (711)
Q Consensus 692 ~~~pV~~v~Fs~~n~lla 709 (711)
|...|.+++|++++.+|+
T Consensus 1084 ~~~~v~~~~~s~d~~~l~ 1101 (1249)
T 3sfz_A 1084 HQGTVLSCAISSDATKFS 1101 (1249)
T ss_dssp CSSCCCCEEECSSSSSCE
T ss_pred cCCcEEEEEECCCCCEEE
Confidence 999999999999999887
No 52
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.3e-35 Score=321.96 Aligned_cols=272 Identities=11% Similarity=0.124 Sum_probs=218.7
Q ss_pred CCCceEEEEECCCCCEEEEEeCCC-------eEEEEeCCCCcee---------------------eeccC---------c
Q psy14440 386 ARQQVTCAEISEDVSILAVGFSES-------YIKLWSLVPQKLK---------------------AMKSS---------D 428 (711)
Q Consensus 386 h~~~V~~l~fs~dg~~LatG~~dg-------~I~vWdl~~~~~~---------------------~~~~~---------~ 428 (711)
..-+|+|++|++||++||+|+.+. .|++|++...... .+... .
T Consensus 13 ~g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g~~~ 92 (365)
T 4h5i_A 13 VGYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILVGCNE 92 (365)
T ss_dssp CSSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEEECCC
T ss_pred CCCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEEEECC
Confidence 345799999999999999998654 5999998654311 00000 1
Q ss_pred cccccccccCCcEEEEEecCCCeeEE----Ee-----ecccCCEEEEEEcCCCCEEEEE--eCCCeEEEEECCCCeEEEE
Q psy14440 429 QLQDIEMECDDILVRIMDERNAETTR----TL-----VGHEGPVRKLSFSPDRSLLLSC--SQDNTIRLWSLLLWRCLVV 497 (711)
Q Consensus 429 ~~~~l~~~~~d~~i~i~d~~~~~~~~----~l-----~~h~~~V~~l~fspdg~~L~s~--s~Dg~V~iwdl~t~~~~~~ 497 (711)
....+..+..++.+++|+........ .. ..+...+.+++|||||++|+++ +.|++|+|||+.+++++..
T Consensus 93 ~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~ 172 (365)
T 4h5i_A 93 NSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFE 172 (365)
T ss_dssp CHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEE
T ss_pred CccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEE
Confidence 11223445567889999865433211 11 2344568999999999998754 4789999999999999988
Q ss_pred EecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeE--EeecCCCCeeEEEEcCCCCEEEEEEcCC----cEEEE
Q psy14440 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLR--LFVGHYSDVDCVQFHPNSNYVATGSSDR----TIRLW 571 (711)
Q Consensus 498 ~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~--~~~~h~~~V~~v~~sp~~~~latgs~Dg----~I~iw 571 (711)
+. |...|++++|+|+|+++++++.+ .+++|+..++..+. ...+|...|.+++|+|++.++++++.|+ ++++|
T Consensus 173 ~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~ 250 (365)
T 4h5i_A 173 IE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKI 250 (365)
T ss_dssp EE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEE
T ss_pred eC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeec
Confidence 86 77889999999999999999855 56666666666543 3456888999999999999999999887 68899
Q ss_pred ECCCCcE----EEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEe-eCCCCCEEEEEEeCCCCEEEEE
Q psy14440 572 DCVTGSH----VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLL-TGHTDVVRALCFSRDGNILASS 646 (711)
Q Consensus 572 D~~~~~~----v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l-~~h~~~V~sl~fspdg~~Lasg 646 (711)
|+..+.. .+.+.+|...|++++|+|||++||+|+.||+|+|||+.+++++..+ .+|.+.|++++|+|||++||||
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~ 330 (365)
T 4h5i_A 251 SIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASV 330 (365)
T ss_dssp EEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEE
T ss_pred ccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEE
Confidence 9877654 3567789999999999999999999999999999999999999875 7999999999999999999999
Q ss_pred eCCCcEEEEeCCC
Q psy14440 647 GQDCSVKLWDFAK 659 (711)
Q Consensus 647 s~Dg~V~iWdl~~ 659 (711)
|.|++|||||+..
T Consensus 331 S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 331 SAANTIHIIKLPL 343 (365)
T ss_dssp ETTSEEEEEECCT
T ss_pred eCCCeEEEEEcCC
Confidence 9999999999964
No 53
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-36 Score=327.05 Aligned_cols=271 Identities=18% Similarity=0.224 Sum_probs=248.9
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCc----------eeeeccCccccccccccCCcEEEEEecCCCeeEEE
Q psy14440 386 ARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK----------LKAMKSSDQLQDIEMECDDILVRIMDERNAETTRT 455 (711)
Q Consensus 386 h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~----------~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 455 (711)
|.+.|++++|++++++||+|+.||.|++|+..+.. +..+.++.+...++.++.++.+++||..+++....
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 186 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQH 186 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEE
Confidence 67899999999999999999999999999965443 33345556677788888999999999999999999
Q ss_pred eecccCC---------------EEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEE
Q psy14440 456 LVGHEGP---------------VRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASA 520 (711)
Q Consensus 456 l~~h~~~---------------V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sg 520 (711)
+..|... |.+++|++++ .+++++.||.|++||+.+++.+..+.+|...|.+++|++++.+|+++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 265 (425)
T 1r5m_A 187 FELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSA 265 (425)
T ss_dssp ECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEE
T ss_pred eeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEE
Confidence 9988887 9999999875 58899999999999999999999999999999999999999999999
Q ss_pred ECCCeEEEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCE
Q psy14440 521 GHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRF 600 (711)
Q Consensus 521 s~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~ 600 (711)
+.||.|++||+++++.+..+.+|...|.+++|+|++ ++++++.||.|++||+++++.+..+..|...|.+++|+++|++
T Consensus 266 ~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 344 (425)
T 1r5m_A 266 SDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQK 344 (425)
T ss_dssp ETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSE
T ss_pred cCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCE
Confidence 999999999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCcEEEEECCCCe--------------------EEEEeeCCCC--CEEEEEEeCCCCEEEEEeCCCcEEEEeCC
Q psy14440 601 LASAGGDGNVHMWDLSNGH--------------------LLTLLTGHTD--VVRALCFSRDGNILASSGQDCSVKLWDFA 658 (711)
Q Consensus 601 Lasgs~Dg~I~iwDl~sg~--------------------~i~~l~~h~~--~V~sl~fspdg~~Lasgs~Dg~V~iWdl~ 658 (711)
|++|+.||.|++||+.+++ .+..+.+|.. .|++++|++++++|++|+.||.|++||+.
T Consensus 345 l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 345 YAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred EEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 9999999999999999888 8999999976 99999999999999999999999999985
No 54
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.1e-35 Score=318.78 Aligned_cols=247 Identities=24% Similarity=0.442 Sum_probs=212.6
Q ss_pred eEEEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEee
Q psy14440 378 IACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLV 457 (711)
Q Consensus 378 ~~~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~ 457 (711)
.+..++.+|...|++++|++++.+|++|+.|++|++||+.+ ++....+.
T Consensus 67 ~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~-------------------------------~~~~~~~~ 115 (343)
T 2xzm_R 67 IPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRT-------------------------------GTTYKRFV 115 (343)
T ss_dssp EEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTS-------------------------------SCEEEEEE
T ss_pred cccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCC-------------------------------CcEEEEEc
Confidence 34567889999999999999999999999999999999843 44566788
Q ss_pred cccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEe---cCCCCEEEEEEcCCC----------CEEEEEECCC
Q psy14440 458 GHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYK---GHGHPVWDIKFSPHG----------YYFASAGHDR 524 (711)
Q Consensus 458 ~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~---~h~~~V~~v~~sp~g----------~~l~sgs~Dg 524 (711)
+|.+.|++++|+|++++|++|+.|++|++||+.. ....... +|...|.+++|+|++ .+|++++.||
T Consensus 116 ~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~ 194 (343)
T 2xzm_R 116 GHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG-ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDG 194 (343)
T ss_dssp CCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS-CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTS
T ss_pred CCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC-CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCC
Confidence 9999999999999999999999999999999984 3333333 688999999999986 7999999999
Q ss_pred eEEEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCC-CcEEEEeeCCCCCeEEEEEecCCCEEEE
Q psy14440 525 MARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT-GSHVRLLTGHKAPVYALSFSVCGRFLAS 603 (711)
Q Consensus 525 ~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~-~~~v~~~~~h~~~I~~la~spdg~~Las 603 (711)
+|++||. .......+.+|...|.+++|+|++++|++|+.||+|++||+.+ +.....+. +...|.+++|+|++.++++
T Consensus 195 ~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~la~ 272 (343)
T 2xzm_R 195 RLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQWVAV 272 (343)
T ss_dssp EEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSCEEEE
T ss_pred EEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeec-CCCcEEEEEECCCCCEEEE
Confidence 9999994 4567778889999999999999999999999999999999954 44444443 5567999999999998875
Q ss_pred EeCCCcEEEEECCCCeEEE--Eee-----------CCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 604 AGGDGNVHMWDLSNGHLLT--LLT-----------GHTDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 604 gs~Dg~I~iwDl~sg~~i~--~l~-----------~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
| .|+.|++||+.+++... .+. +|...|++++|+|+|++|++|+.||+|++|++.+
T Consensus 273 ~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 273 G-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp E-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEE
T ss_pred E-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEc
Confidence 5 57889999998876433 443 6888999999999999999999999999999864
No 55
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=9.4e-35 Score=308.66 Aligned_cols=273 Identities=21% Similarity=0.314 Sum_probs=233.0
Q ss_pred ceeeeccCcc-ccccccccCCcEEEEEecCC-----CeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe
Q psy14440 420 KLKAMKSSDQ-LQDIEMECDDILVRIMDERN-----AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWR 493 (711)
Q Consensus 420 ~~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~-----~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~ 493 (711)
.+..+..+.. ...++.++.|+.|++|+... +.....+.+|...|.+++|++++++|++|+.|++|++||+.+++
T Consensus 19 ~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~ 98 (319)
T 3frx_A 19 WVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGE 98 (319)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred eEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCC
Confidence 3444555543 35788899999999998753 34567899999999999999999999999999999999999999
Q ss_pred EEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEeecCCCCeeEEEEcCC------CCEEEEEEcCCc
Q psy14440 494 CLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPN------SNYVATGSSDRT 567 (711)
Q Consensus 494 ~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~------~~~latgs~Dg~ 567 (711)
.+..+.+|...|.+++|++++.+|++|+.|++|++||++ +..+..+.+|...|.+++|+|+ +.+|++|+.|++
T Consensus 99 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~ 177 (319)
T 3frx_A 99 TYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKM 177 (319)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSC
T ss_pred eeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCE
Confidence 999999999999999999999999999999999999997 4677888899999999999985 458999999999
Q ss_pred EEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEe
Q psy14440 568 IRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSG 647 (711)
Q Consensus 568 I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs 647 (711)
|++||+++++....+.+|...|++++|+|+|++|++|+.||.|+|||+.+++.+..+..+ ..|.+++|+|++.+|++++
T Consensus 178 i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~~~la~~~ 256 (319)
T 3frx_A 178 VKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLAFSPNRYWLAAAT 256 (319)
T ss_dssp EEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC-SCEEEEEECSSSSEEEEEE
T ss_pred EEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-CcEEEEEEcCCCCEEEEEc
Confidence 999999999999999999999999999999999999999999999999999999988865 5799999999999999887
Q ss_pred CCCcEEEEeCCCCCCccCccccccccccccccccccceeeecccCCcceEEEEEccCCeeee-C
Q psy14440 648 QDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILLR-G 710 (711)
Q Consensus 648 ~Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla-G 710 (711)
. +.+++|++........ . ..........+...|.+++|+++|.+|+ |
T Consensus 257 ~-~~i~v~~~~~~~~~~~---~------------~~~~~~~~~~~~~~v~~~~~spdg~~l~sg 304 (319)
T 3frx_A 257 A-TGIKVFSLDPQYLVDD---L------------RPEFAGYSKAAEPHAVSLAWSADGQTLFAG 304 (319)
T ss_dssp T-TEEEEEEETTEEEEEE---E------------CCCCTTCCGGGCCCEEEEEECTTSSEEEEE
T ss_pred C-CCcEEEEeCcCeeeec---c------------CccccccccCcCcceeEEEECCCCCEEEEe
Confidence 5 4699999864211000 0 0000011233456799999999999998 5
No 56
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=9.1e-35 Score=323.57 Aligned_cols=300 Identities=24% Similarity=0.373 Sum_probs=257.4
Q ss_pred eEEEEEecCCCce-EEEEECCCCCEEEEEeCCCeEEEEeCCCCcee-----------eeccCccccccccccCCcEEEEE
Q psy14440 378 IACYTLLNARQQV-TCAEISEDVSILAVGFSESYIKLWSLVPQKLK-----------AMKSSDQLQDIEMECDDILVRIM 445 (711)
Q Consensus 378 ~~~~tl~~h~~~V-~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~-----------~~~~~~~~~~l~~~~~d~~i~i~ 445 (711)
.+..++.+|.+.| +|+.+ ++++|++|+.||.|++||+.+.+.. .+....+. .++.++.|+.|++|
T Consensus 112 ~~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vw 188 (464)
T 3v7d_B 112 PQRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVW 188 (464)
T ss_dssp CEEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEE
T ss_pred cceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEE
Confidence 3566888998885 66666 5679999999999999998775532 23333333 77888999999999
Q ss_pred ecCCCeeEEEeecccCCEEEEEEc--CCCCEEEEEeCCCeEEEEECCCCe-----------------------EEEEEec
Q psy14440 446 DERNAETTRTLVGHEGPVRKLSFS--PDRSLLLSCSQDNTIRLWSLLLWR-----------------------CLVVYKG 500 (711)
Q Consensus 446 d~~~~~~~~~l~~h~~~V~~l~fs--pdg~~L~s~s~Dg~V~iwdl~t~~-----------------------~~~~~~~ 500 (711)
|..+++....+.+|.+.|.+++|+ +++.+|++|+.||+|++||+.+.. .+..+.+
T Consensus 189 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (464)
T 3v7d_B 189 DIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG 268 (464)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC
T ss_pred ECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC
Confidence 999999999999999999999998 578899999999999999998765 3567788
Q ss_pred CCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEE
Q psy14440 501 HGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVR 580 (711)
Q Consensus 501 h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~ 580 (711)
|...|.++ ++++.++++|+.||+|++||+++++.+..+.+|...|.+++|+++++++++|+.||+|++||+++++++.
T Consensus 269 ~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~ 346 (464)
T 3v7d_B 269 HMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMY 346 (464)
T ss_dssp CSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred ccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEE
Confidence 99999887 5678899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q psy14440 581 LLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKL 660 (711)
Q Consensus 581 ~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~ 660 (711)
.+.+|...|.+++|+ +++|++|+.||.|++||+.++....... |...+..++|++++++|++|+ ||.|++||+.+.
T Consensus 347 ~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g 422 (464)
T 3v7d_B 347 TLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSG 422 (464)
T ss_dssp EECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTC
T ss_pred EEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCC
Confidence 999999999999997 6899999999999999999988766654 566778899999999999998 999999999763
Q ss_pred CCccCccccccccccccccccccceeee-cccCCcceEEEEEccCCeeee
Q psy14440 661 SDEVGTEEVNLSHSADIKNSSLAYLVRS-YKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~t~~~pV~~v~Fs~~n~lla 709 (711)
. ++.. +..+..+|.+|+|+.+.++.+
T Consensus 423 ~-----------------------~~~~~~~~~~~~v~~v~~~~~~l~~~ 449 (464)
T 3v7d_B 423 K-----------------------LVHANILKDADQIWSVNFKGKTLVAA 449 (464)
T ss_dssp C-----------------------EEESCTTTTCSEEEEEEEETTEEEEE
T ss_pred c-----------------------EEehhhccCCCcEEEEEecCCEEEEE
Confidence 2 2222 445678899999985444443
No 57
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-35 Score=358.90 Aligned_cols=198 Identities=13% Similarity=0.116 Sum_probs=171.5
Q ss_pred EEEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCce----------eeeccCccccccccccCCcEEEEEecC
Q psy14440 379 ACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKL----------KAMKSSDQLQDIEMECDDILVRIMDER 448 (711)
Q Consensus 379 ~~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~----------~~~~~~~~~~~l~~~~~d~~i~i~d~~ 448 (711)
......+|.+.|+|++|+|++++||+|+.||.|+||+..+.+. ..+.++. ...++.++.|+.|++||..
T Consensus 9 ~~~~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~ 87 (902)
T 2oaj_A 9 AETNKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLY 87 (902)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETT
T ss_pred ccccccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECC
Confidence 3445678999999999999999999999999999999876442 3344444 4468888899999999999
Q ss_pred CCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEE-----------EEEecCCCCEEEEEEcCC-CCE
Q psy14440 449 NAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCL-----------VVYKGHGHPVWDIKFSPH-GYY 516 (711)
Q Consensus 449 ~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~-----------~~~~~h~~~V~~v~~sp~-g~~ 516 (711)
+++.+..+. |.+.|++++|+|++++|++|+.||+|++||+.++++. ..+.+|...|++++|+|+ +..
T Consensus 88 ~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~ 166 (902)
T 2oaj_A 88 SQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGT 166 (902)
T ss_dssp TCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEE
T ss_pred CCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCE
Confidence 998888886 7789999999999999999999999999999988764 123568999999999996 579
Q ss_pred EEEEECCCeEEEEECCCCceeEEeecC------------------CCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcE
Q psy14440 517 FASAGHDRMARLWATDSYHPLRLFVGH------------------YSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH 578 (711)
Q Consensus 517 l~sgs~Dg~i~lwd~~~~~~~~~~~~h------------------~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~ 578 (711)
+++|+.||+| +||+++++.++.+.+| ...|.+++|+|+|++|++|+.||+|++||++++++
T Consensus 167 l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~ 245 (902)
T 2oaj_A 167 VLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHM 245 (902)
T ss_dssp EEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCE
T ss_pred EEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcE
Confidence 9999999999 9999999988888766 47799999999999999999999999999977665
Q ss_pred E
Q psy14440 579 V 579 (711)
Q Consensus 579 v 579 (711)
+
T Consensus 246 ~ 246 (902)
T 2oaj_A 246 I 246 (902)
T ss_dssp E
T ss_pred E
Confidence 4
No 58
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.1e-35 Score=312.25 Aligned_cols=267 Identities=22% Similarity=0.408 Sum_probs=216.0
Q ss_pred ceeeeccCccccccccccCCcEEEEEecCCC--eeEEEe-ec-ccCCEEEEEEcCCCCEEEEEeCCCeEEEEECC-----
Q psy14440 420 KLKAMKSSDQLQDIEMECDDILVRIMDERNA--ETTRTL-VG-HEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL----- 490 (711)
Q Consensus 420 ~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~--~~~~~l-~~-h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~----- 490 (711)
.+..+..+.+ .++.++.|+.|++|+...+ .....+ .+ |.+.|++++|+|++++|++|+.|++|++||+.
T Consensus 16 ~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~ 93 (330)
T 2hes_X 16 KIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADR 93 (330)
T ss_dssp CEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC------
T ss_pred ceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCc
Confidence 3344444433 6788899999999998764 445555 44 99999999999999999999999999999984
Q ss_pred --CCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCC----CceeEEeecCCCCeeEEEEcCCCCEEEEEEc
Q psy14440 491 --LWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDS----YHPLRLFVGHYSDVDCVQFHPNSNYVATGSS 564 (711)
Q Consensus 491 --t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~----~~~~~~~~~h~~~V~~v~~sp~~~~latgs~ 564 (711)
..+.+..+.+|...|++++|+|+|++|++|+.|++|++||++. .+.+..+.+|...|.+++|+|++++|++|+.
T Consensus 94 ~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~ 173 (330)
T 2hes_X 94 TFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSY 173 (330)
T ss_dssp -CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEET
T ss_pred cccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcC
Confidence 3467788899999999999999999999999999999999953 2467788899999999999999999999999
Q ss_pred CCcEEEEECCCC--cEEEEeeCCCCCeEEEEEecC--CCEEEEEeCCCcEEEEECCCC--------eEEEEeeC-CCCCE
Q psy14440 565 DRTIRLWDCVTG--SHVRLLTGHKAPVYALSFSVC--GRFLASAGGDGNVHMWDLSNG--------HLLTLLTG-HTDVV 631 (711)
Q Consensus 565 Dg~I~iwD~~~~--~~v~~~~~h~~~I~~la~spd--g~~Lasgs~Dg~I~iwDl~sg--------~~i~~l~~-h~~~V 631 (711)
|++|++||..++ +++..+.+|.+.|.+++|+++ +.+|++|+.||+|++||+.++ .....+.+ |...|
T Consensus 174 D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v 253 (330)
T 2hes_X 174 DDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQV 253 (330)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCE
T ss_pred CCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccce
Confidence 999999999876 678899999999999999998 779999999999999998764 45555655 89999
Q ss_pred EEEEEeCCCCEEEEEeCCCcEEEEeCCCCCCccCccccccccccccccccccceeeecccCCc-ceEEEEEcc--CCeee
Q psy14440 632 RALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKAS-PLLHLIFSR--RNILL 708 (711)
Q Consensus 632 ~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~-pV~~v~Fs~--~n~ll 708 (711)
++++|++++ +|++|+.||+|+|||+.... .......+..|.. .|.+++|++ ++.+|
T Consensus 254 ~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~--------------------~~~~~~~~~~h~~~~v~~v~~~~~~~~~~l 312 (330)
T 2hes_X 254 YNVAWGFNG-LIASVGADGVLAVYEEVDGE--------------------WKVFAKRALCHGVYEINVVKWLELNGKTIL 312 (330)
T ss_dssp EEEEECTTS-CEEEEETTSCEEEEEEETTE--------------------EEEEEEESCTTTTSCEEEEEEC-----CCE
T ss_pred EEEEEcCCC-EEEEEeCCCEEEEEEcCCCc--------------------eEEEeccccccccceEEEEEEecCCCceEE
Confidence 999999654 89999999999999975311 0111122345665 899999999 67777
Q ss_pred e
Q psy14440 709 R 709 (711)
Q Consensus 709 a 709 (711)
|
T Consensus 313 a 313 (330)
T 2hes_X 313 A 313 (330)
T ss_dssp E
T ss_pred E
Confidence 7
No 59
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.9e-37 Score=346.39 Aligned_cols=313 Identities=12% Similarity=0.024 Sum_probs=233.1
Q ss_pred cCCCceEEEEECCCC---------CEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCee---
Q psy14440 385 NARQQVTCAEISEDV---------SILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAET--- 452 (711)
Q Consensus 385 ~h~~~V~~l~fs~dg---------~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~--- 452 (711)
.+.+.|.|++|+|++ ++||+|+.++.. ...+++...++.++.|+.|++|+..+++.
T Consensus 131 ~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~------------~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~ 198 (524)
T 2j04_B 131 NVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMD------------EPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCV 198 (524)
T ss_dssp ECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------------------CEEEEEEEEETTTCCEE
T ss_pred ECCCceeEEEecccCCCCccCcCCeEEEEEEecccC------------CccchhhhhhccCCCCceEEEEEccCCCCCce
Confidence 368899999999987 899999876531 01235566678888999999999876653
Q ss_pred -EEEeecccCCEEEEEEcCC------CCEEEEEeCCCeEEEEECCCCeE-----------EEEEecCCCCEEEEEEcCCC
Q psy14440 453 -TRTLVGHEGPVRKLSFSPD------RSLLLSCSQDNTIRLWSLLLWRC-----------LVVYKGHGHPVWDIKFSPHG 514 (711)
Q Consensus 453 -~~~l~~h~~~V~~l~fspd------g~~L~s~s~Dg~V~iwdl~t~~~-----------~~~~~~h~~~V~~v~~sp~g 514 (711)
...+.+|.+.|.+++|+|+ +.+|++|+.||+|++||+.++.. ...+.+|...|++++|++++
T Consensus 199 ~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~ 278 (524)
T 2j04_B 199 KVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT 278 (524)
T ss_dssp EEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS
T ss_pred EEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC
Confidence 2446778899999999996 57999999999999999976532 24678899999999999864
Q ss_pred CEEEEEECCCeEEEEECCCC-ceeEEeecCCCCeeEE--EEcCCC-CEEEEEEcCCcEEEEECCCCcEEEEeeCCCC--C
Q psy14440 515 YYFASAGHDRMARLWATDSY-HPLRLFVGHYSDVDCV--QFHPNS-NYVATGSSDRTIRLWDCVTGSHVRLLTGHKA--P 588 (711)
Q Consensus 515 ~~l~sgs~Dg~i~lwd~~~~-~~~~~~~~h~~~V~~v--~~sp~~-~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~--~ 588 (711)
.|++|+.||+|++||++++ .+...+.+|...|.+| +|++++ ++||+|+.|++|+|||+++++++..+.+|.. .
T Consensus 279 -~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~ 357 (524)
T 2j04_B 279 -TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSN 357 (524)
T ss_dssp -EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCS
T ss_pred -eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCc
Confidence 8999999999999999976 4556788999999999 567887 8999999999999999999988877777753 5
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCCccCcc-
Q psy14440 589 VYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTE- 667 (711)
Q Consensus 589 I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~~~~~- 667 (711)
|.+++|+|+++.|++++.|++|++||++++.++..+.+|.+.|++++|+|+|++|++|+.||+|++||+....-.....
T Consensus 358 v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~ 437 (524)
T 2j04_B 358 LVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNS 437 (524)
T ss_dssp CCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC---
T ss_pred ccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccC
Confidence 8899999999999999999999999999999888899999999999999999999999999999999986531111000
Q ss_pred -------cc-cccccccc-----------cc-ccccceeeecccCCcceEEEEEccCC---eeee-C
Q psy14440 668 -------EV-NLSHSADI-----------KN-SSLAYLVRSYKTKASPLLHLIFSRRN---ILLR-G 710 (711)
Q Consensus 668 -------~~-~~~~~~~~-----------~~-~~~~~~l~~~~t~~~pV~~v~Fs~~n---~lla-G 710 (711)
.+ ....+++. .. ...+.++..+.+|..+|.+|+|++++ .++| |
T Consensus 438 ~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg 504 (524)
T 2j04_B 438 SATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFS 504 (524)
T ss_dssp ---CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEE
T ss_pred ccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhh
Confidence 00 11111110 00 01245667788999999999999995 4787 5
No 60
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1e-34 Score=317.53 Aligned_cols=267 Identities=24% Similarity=0.443 Sum_probs=233.7
Q ss_pred CCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccC------------------CEEEEEEcCCCCEEEEEe
Q psy14440 418 PQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEG------------------PVRKLSFSPDRSLLLSCS 479 (711)
Q Consensus 418 ~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~------------------~V~~l~fspdg~~L~s~s 479 (711)
...+..+.++++...++.++ ++.+++|+..+++....+.+|.. .|.+++|+++|++|++|+
T Consensus 64 ~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~ 142 (393)
T 1erj_A 64 TSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGA 142 (393)
T ss_dssp SSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEE
T ss_pred CCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEc
Confidence 34556677777878787765 67899999999998888876643 399999999999999999
Q ss_pred CCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEeecCCCCeeEEEEcC-CCCE
Q psy14440 480 QDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHP-NSNY 558 (711)
Q Consensus 480 ~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp-~~~~ 558 (711)
.|++|++||+.+++.+..+.+|...|++++|+|++.+|++|+.|++|++||+++++....+. +...+.+++|+| ++++
T Consensus 143 ~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~ 221 (393)
T 1erj_A 143 EDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGDGKY 221 (393)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTTCCE
T ss_pred CCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCCCCE
Confidence 99999999999999999999999999999999999999999999999999999998877765 567799999999 8999
Q ss_pred EEEEEcCCcEEEEECCCCcEEEEe-------eCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC------------Ce
Q psy14440 559 VATGSSDRTIRLWDCVTGSHVRLL-------TGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN------------GH 619 (711)
Q Consensus 559 latgs~Dg~I~iwD~~~~~~v~~~-------~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~s------------g~ 619 (711)
|++|+.||+|++||++++..+..+ .+|...|++++|+++|++|++|+.||.|++||+.+ +.
T Consensus 222 l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~ 301 (393)
T 1erj_A 222 IAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGT 301 (393)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------C
T ss_pred EEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCc
Confidence 999999999999999999988776 57999999999999999999999999999999975 34
Q ss_pred EEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCCccCccccccccccccccccccceeeecccCCcceEEE
Q psy14440 620 LLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHL 699 (711)
Q Consensus 620 ~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v 699 (711)
+...+.+|...|.+++|++++.+|++|+.||+|++||+.+. ..+..+..|...|.++
T Consensus 302 ~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~-----------------------~~~~~l~~h~~~v~~v 358 (393)
T 1erj_A 302 CEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG-----------------------NPLLMLQGHRNSVISV 358 (393)
T ss_dssp EEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTC-----------------------CEEEEEECCSSCEEEE
T ss_pred ceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCC-----------------------eEEEEECCCCCCEEEE
Confidence 56678899999999999999999999999999999998642 2355678899999999
Q ss_pred EEcc------CCeeee
Q psy14440 700 IFSR------RNILLR 709 (711)
Q Consensus 700 ~Fs~------~n~lla 709 (711)
+|++ ++.+||
T Consensus 359 ~~~~~~~~~p~~~~l~ 374 (393)
T 1erj_A 359 AVANGSSLGPEYNVFA 374 (393)
T ss_dssp EECSSCTTCTTCEEEE
T ss_pred EecCCcCcCCCCCEEE
Confidence 9986 567776
No 61
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=5.3e-36 Score=326.26 Aligned_cols=275 Identities=21% Similarity=0.318 Sum_probs=240.2
Q ss_pred CCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe---
Q psy14440 417 VPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWR--- 493 (711)
Q Consensus 417 ~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~--- 493 (711)
....+..+.++++...++.++.|+.|++||..+++....+.+|...|.+++|+|++++|++|+.|++|++||+.+..
T Consensus 65 H~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~ 144 (380)
T 3iz6_a 65 HSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRD 144 (380)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCC
T ss_pred cccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCcccc
Confidence 44556667777888889999999999999999999999999999999999999999999999999999999986432
Q ss_pred ----EEEEEecCCCCEEEEEEcCC-CCEEEEEECCCeEEEEECCCCceeEEe-----ecCCCCeeEEEEcC-CCCEEEEE
Q psy14440 494 ----CLVVYKGHGHPVWDIKFSPH-GYYFASAGHDRMARLWATDSYHPLRLF-----VGHYSDVDCVQFHP-NSNYVATG 562 (711)
Q Consensus 494 ----~~~~~~~h~~~V~~v~~sp~-g~~l~sgs~Dg~i~lwd~~~~~~~~~~-----~~h~~~V~~v~~sp-~~~~latg 562 (711)
....+.+|...|.++.|+|+ +..|++|+.|++|++||+.+++.+..+ .+|...|.+++|++ ++++|++|
T Consensus 145 ~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg 224 (380)
T 3iz6_a 145 GNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISG 224 (380)
T ss_dssp CSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEE
T ss_pred CCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEE
Confidence 34567899999999999996 457999999999999999999988877 67999999999987 88999999
Q ss_pred EcCCcEEEEECC-CCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCC-------CCEEEE
Q psy14440 563 SSDRTIRLWDCV-TGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHT-------DVVRAL 634 (711)
Q Consensus 563 s~Dg~I~iwD~~-~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~-------~~V~sl 634 (711)
+.||+|++||++ .+..++.+.+|.+.|++++|+|+|++|++|+.||+|++||+++++.+..+..+. ..|+++
T Consensus 225 s~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~ 304 (380)
T 3iz6_a 225 SCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSV 304 (380)
T ss_dssp ETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEE
T ss_pred ECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEE
Confidence 999999999998 557889999999999999999999999999999999999999999998887553 248999
Q ss_pred EEeCCCCEEEEEeCCCcEEEEeCCCCCCccCccccccccccccccccccceeeecccCCcceEEEEEccCCeeee-C
Q psy14440 635 CFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILLR-G 710 (711)
Q Consensus 635 ~fspdg~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla-G 710 (711)
+|+++|++|++|+.||.|++||+....... .+-.....|...|.+++|++++.+|| |
T Consensus 305 ~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~-------------------~~~~~~~~h~~~v~~l~~s~dg~~l~sg 362 (380)
T 3iz6_a 305 AFSISGRLLFAGYSNGDCYVWDTLLAEMVL-------------------NLGTLQNSHEGRISCLGLSSDGSALCTG 362 (380)
T ss_dssp EECSSSSEEEEECTTSCEEEEETTTCCEEE-------------------EECCSCSSCCCCCCEEEECSSSSEEEEE
T ss_pred EECCCCCEEEEEECCCCEEEEECCCCceEE-------------------EEecccCCCCCceEEEEECCCCCEEEEe
Confidence 999999999999999999999986422100 00011256888999999999999998 5
No 62
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=7.7e-36 Score=322.53 Aligned_cols=293 Identities=16% Similarity=0.243 Sum_probs=221.9
Q ss_pred EEEEECCCCCEEEEEeCCCeEEEEeCCC-------CceeeeccCccccccccccC------CcEEEEEecCCCee----E
Q psy14440 391 TCAEISEDVSILAVGFSESYIKLWSLVP-------QKLKAMKSSDQLQDIEMECD------DILVRIMDERNAET----T 453 (711)
Q Consensus 391 ~~l~fs~dg~~LatG~~dg~I~vWdl~~-------~~~~~~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~----~ 453 (711)
..+.+..++.++.+ ..+.....|++.. ..+..+.+++++..++.++. ++.+++|+..++.. .
T Consensus 9 sg~d~g~~~~~~~~-~g~~~~~~w~~p~~~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~ 87 (357)
T 4g56_B 9 SGVDLGTENLYFQS-NGSSKGSAWGRPVTAPACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLC 87 (357)
T ss_dssp --------------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGC
T ss_pred cCCCCCccceEEec-CCCccccccCCCCCCcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEe
Confidence 34455666655444 4467789999743 34677889999999988876 78899998766543 3
Q ss_pred EEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEE----EEecCCCCEEEEEEcCCCCEEEEEECCCeEEEE
Q psy14440 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLV----VYKGHGHPVWDIKFSPHGYYFASAGHDRMARLW 529 (711)
Q Consensus 454 ~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~----~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lw 529 (711)
....+|...|++++|++++. +++++.||+|+|||+.+++... ...+|...|++++|+|++++|++|+.|++|++|
T Consensus 88 ~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iw 166 (357)
T 4g56_B 88 TAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVW 166 (357)
T ss_dssp SEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred cccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 34567899999999999985 5677889999999998876543 345799999999999999999999999999999
Q ss_pred ECCCCceeEEeecCCCCeeEEEEcCCCC-EEEEEEcCCcEEEEECCCCcEEEEee--CCCCCeEEEEEecC-CCEEEEEe
Q psy14440 530 ATDSYHPLRLFVGHYSDVDCVQFHPNSN-YVATGSSDRTIRLWDCVTGSHVRLLT--GHKAPVYALSFSVC-GRFLASAG 605 (711)
Q Consensus 530 d~~~~~~~~~~~~h~~~V~~v~~sp~~~-~latgs~Dg~I~iwD~~~~~~v~~~~--~h~~~I~~la~spd-g~~Lasgs 605 (711)
|+++++.+..+.+|...|.+++|++++. ++++++.||+|++||+++++.+..+. .|...+++++|+|+ +.+|++|+
T Consensus 167 d~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~ 246 (357)
T 4g56_B 167 DLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGD 246 (357)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEE
T ss_pred ECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEee
Confidence 9999999999999999999999999874 78999999999999999998776554 56788999999997 56899999
Q ss_pred CCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCC-CEEEEEeCCCcEEEEeCCCCCCccCccccccccccccccccccc
Q psy14440 606 GDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDG-NILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAY 684 (711)
Q Consensus 606 ~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg-~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (711)
.|+.|++||+++++.+..+.+|...|++++|++++ ++|++|+.||+|+|||+... .
T Consensus 247 ~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~-----------------------~ 303 (357)
T 4g56_B 247 ETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS-----------------------E 303 (357)
T ss_dssp SSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC-----------------------E
T ss_pred cccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC-----------------------c
Confidence 99999999999999999999999999999999987 58999999999999998641 1
Q ss_pred eeeecccCCcceEEEEEcc-CCeeee
Q psy14440 685 LVRSYKTKASPLLHLIFSR-RNILLR 709 (711)
Q Consensus 685 ~l~~~~t~~~pV~~v~Fs~-~n~lla 709 (711)
++. ...|...|.+|+|+| ++.+||
T Consensus 304 ~~~-~~~H~~~V~~vafsP~d~~~l~ 328 (357)
T 4g56_B 304 VFR-DLSHRDFVTGVAWSPLDHSKFT 328 (357)
T ss_dssp EEE-ECCCSSCEEEEEECSSSTTEEE
T ss_pred EeE-ECCCCCCEEEEEEeCCCCCEEE
Confidence 222 336888999999998 777777
No 63
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=8.9e-36 Score=328.90 Aligned_cols=303 Identities=17% Similarity=0.251 Sum_probs=232.3
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeeccc-----
Q psy14440 386 ARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHE----- 460 (711)
Q Consensus 386 h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~----- 460 (711)
+.+.|+|++|+++|++||+|+.||.|+||++.+....... .....+....+.+|.
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~--------------------~~~~~~~~~~~~~h~~~~~~ 86 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSH--------------------SRGEYNVYSTFQSHEPEFDY 86 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CC--------------------CCCCEEEEEEEECCCCEEEG
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcc--------------------cccceeEecccccccccccc
Confidence 4689999999999999999999999999998754321100 001223456778898
Q ss_pred -------CCEEEEEEcCCC--CEEEEEeCCCeEEEEECCCCeEE------------------------------------
Q psy14440 461 -------GPVRKLSFSPDR--SLLLSCSQDNTIRLWSLLLWRCL------------------------------------ 495 (711)
Q Consensus 461 -------~~V~~l~fspdg--~~L~s~s~Dg~V~iwdl~t~~~~------------------------------------ 495 (711)
+.|++++|++++ ..|++++.||+|++||+.++...
T Consensus 87 ~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (447)
T 3dw8_B 87 LKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEA 166 (447)
T ss_dssp GGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEE
T ss_pred cccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeec
Confidence 889999999998 79999999999999999764432
Q ss_pred ---EE-EecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCC-CceeE-------EeecCCCCeeEEEEcCCC-CEEEEE
Q psy14440 496 ---VV-YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDS-YHPLR-------LFVGHYSDVDCVQFHPNS-NYVATG 562 (711)
Q Consensus 496 ---~~-~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~-~~~~~-------~~~~h~~~V~~v~~sp~~-~~latg 562 (711)
.. ..+|...|++++|++++++|++| .|++|++||+++ +..+. .+.+|...|.+++|+|++ ++|++|
T Consensus 167 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~ 245 (447)
T 3dw8_B 167 SPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYS 245 (447)
T ss_dssp EEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEE
T ss_pred cceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEE
Confidence 12 36799999999999999999998 799999999984 44444 255899999999999998 999999
Q ss_pred EcCCcEEEEECCCCcE----EEEeeCCCC------------CeEEEEEecCCCEEEEEeCCCcEEEEECCC-CeEEEEee
Q psy14440 563 SSDRTIRLWDCVTGSH----VRLLTGHKA------------PVYALSFSVCGRFLASAGGDGNVHMWDLSN-GHLLTLLT 625 (711)
Q Consensus 563 s~Dg~I~iwD~~~~~~----v~~~~~h~~------------~I~~la~spdg~~Lasgs~Dg~I~iwDl~s-g~~i~~l~ 625 (711)
+.||+|++||+++++. +..+.+|.. .|++++|+|+|++|++++. |.|+|||+++ ++.+..+.
T Consensus 246 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~ 324 (447)
T 3dw8_B 246 SSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQ 324 (447)
T ss_dssp ETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEE
T ss_pred eCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceee
Confidence 9999999999999987 788888876 8999999999999999999 9999999997 88888888
Q ss_pred CCCCC---------------EEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCCccCccccccccccc------cc---ccc
Q psy14440 626 GHTDV---------------VRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSAD------IK---NSS 681 (711)
Q Consensus 626 ~h~~~---------------V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~~~~~~~~------~~---~~~ 681 (711)
+|... +..++|+++|++|++|+.||.|+|||+.+.....-........... +. ...
T Consensus 325 ~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (447)
T 3dw8_B 325 VHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRK 404 (447)
T ss_dssp SCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCC
T ss_pred ccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcc
Confidence 88632 3349999999999999999999999998754321000000000000 00 000
Q ss_pred ccceeeecccCCcceEEEEEccCCeeee-C
Q psy14440 682 LAYLVRSYKTKASPLLHLIFSRRNILLR-G 710 (711)
Q Consensus 682 ~~~~l~~~~t~~~pV~~v~Fs~~n~lla-G 710 (711)
..............|.+++|+|++.+|| |
T Consensus 405 ~~~~~~~~~~~~~~i~~~~~~p~~~~la~~ 434 (447)
T 3dw8_B 405 KDEISVDSLDFNKKILHTAWHPKENIIAVA 434 (447)
T ss_dssp TTCEEGGGCCTTSCCCEEEECSSSSEEEEE
T ss_pred cccccccccccCCceeEEEECCCCCEEEEE
Confidence 0001111122356899999999999998 5
No 64
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-36 Score=331.21 Aligned_cols=276 Identities=14% Similarity=0.180 Sum_probs=242.3
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCC----C-c----------eeeeccCcc-ccccccccCCcEEEEEec
Q psy14440 384 LNARQQVTCAEISEDVSILAVGFSESYIKLWSLVP----Q-K----------LKAMKSSDQ-LQDIEMECDDILVRIMDE 447 (711)
Q Consensus 384 ~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~----~-~----------~~~~~~~~~-~~~l~~~~~d~~i~i~d~ 447 (711)
..|...|++++|++++++||+|+.||.|++|++.. . . +..+.++++ ...++.++.++.|++||.
T Consensus 64 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~ 143 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDM 143 (416)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBT
T ss_pred EecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEEC
Confidence 35788999999999999999999999999999976 2 2 222344454 667888889999999999
Q ss_pred CCCe------eEE---EeecccCCEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCeEEEEEecC------CCCEEEEEEc
Q psy14440 448 RNAE------TTR---TLVGHEGPVRKLSFSPD-RSLLLSCSQDNTIRLWSLLLWRCLVVYKGH------GHPVWDIKFS 511 (711)
Q Consensus 448 ~~~~------~~~---~l~~h~~~V~~l~fspd-g~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h------~~~V~~v~~s 511 (711)
.+.+ ... .+.+|.+.|++++|+++ +.+|++++.||.|++||+.+++.+..+..| ...|.+++|+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 223 (416)
T 2pm9_A 144 NKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWH 223 (416)
T ss_dssp TTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEEC
T ss_pred CCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEEC
Confidence 8776 332 34689999999999999 789999999999999999999999999877 7899999999
Q ss_pred CCC-CEEEEEECCC---eEEEEECCCC-ceeEEee-cCCCCeeEEEEcC-CCCEEEEEEcCCcEEEEECCCCcEEEEeeC
Q psy14440 512 PHG-YYFASAGHDR---MARLWATDSY-HPLRLFV-GHYSDVDCVQFHP-NSNYVATGSSDRTIRLWDCVTGSHVRLLTG 584 (711)
Q Consensus 512 p~g-~~l~sgs~Dg---~i~lwd~~~~-~~~~~~~-~h~~~V~~v~~sp-~~~~latgs~Dg~I~iwD~~~~~~v~~~~~ 584 (711)
|++ .++++++.|+ .|++||++++ .++..+. +|...|.+++|+| ++++|++|+.||+|++||+++++.+..+.+
T Consensus 224 ~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~ 303 (416)
T 2pm9_A 224 PKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPA 303 (416)
T ss_dssp SSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEEC
T ss_pred CCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecC
Confidence 987 6999999999 9999999986 6777888 8999999999999 999999999999999999999999999999
Q ss_pred CCCCeEEEEEecCC-CEEEEEeCCCcEEEEECCCCeEEEEe-----------------------------------eCCC
Q psy14440 585 HKAPVYALSFSVCG-RFLASAGGDGNVHMWDLSNGHLLTLL-----------------------------------TGHT 628 (711)
Q Consensus 585 h~~~I~~la~spdg-~~Lasgs~Dg~I~iwDl~sg~~i~~l-----------------------------------~~h~ 628 (711)
|...|++++|+|++ .+|++++.||.|+|||+.+++..... ..|.
T Consensus 304 ~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (416)
T 2pm9_A 304 RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYG 383 (416)
T ss_dssp SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTC
T ss_pred CCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCcccc
Confidence 99999999999999 89999999999999999876532211 1156
Q ss_pred CCEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 629 DVVRALCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 629 ~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
..+.+++|+++|++|++|+.||+|+||++.+
T Consensus 384 ~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~ 414 (416)
T 2pm9_A 384 EPSPAAHWAFGGKLVQITPDGKGVSITNPKI 414 (416)
T ss_dssp CCSCCCEEETTTEEECBCTTSSCBCCBCCCC
T ss_pred CCccceEEeeCCeEEEEeCCCCeEEEEEecc
Confidence 7788999999999999999999999999875
No 65
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.9e-36 Score=328.73 Aligned_cols=278 Identities=14% Similarity=0.244 Sum_probs=238.3
Q ss_pred eEEEEE-ecCCCceEEEEECC-CCCEEEEEeCCCeEEEEeCCC---C-------------ceeeeccCccccccccccCC
Q psy14440 378 IACYTL-LNARQQVTCAEISE-DVSILAVGFSESYIKLWSLVP---Q-------------KLKAMKSSDQLQDIEMECDD 439 (711)
Q Consensus 378 ~~~~tl-~~h~~~V~~l~fs~-dg~~LatG~~dg~I~vWdl~~---~-------------~~~~~~~~~~~~~l~~~~~d 439 (711)
..+.++ .+|.+.|+|++|++ ++++||+|+.||.|+||++.+ . .+..+.+..+...++.++.|
T Consensus 53 ~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d 132 (437)
T 3gre_A 53 KLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKD 132 (437)
T ss_dssp CEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETT
T ss_pred eEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCC
Confidence 345677 78899999999999 999999999999999999854 2 12334555667778899999
Q ss_pred cEEEEEecC---CCeeEEEeec------------ccCCEEEEE--EcCCCCEEEEEeCCCeEEEEECCCCeEEEEEec--
Q psy14440 440 ILVRIMDER---NAETTRTLVG------------HEGPVRKLS--FSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKG-- 500 (711)
Q Consensus 440 ~~i~i~d~~---~~~~~~~l~~------------h~~~V~~l~--fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~-- 500 (711)
+.|++||.. +++....+.+ +...+.++. +++++.+|++|+.||+|++||+.+++++..+.+
T Consensus 133 g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 212 (437)
T 3gre_A 133 GQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSP 212 (437)
T ss_dssp SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCG
T ss_pred CEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCC
Confidence 999999984 4444443332 455666766 567899999999999999999999999999998
Q ss_pred CCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEee-cCCCCeeEEEEcC----CCCEEEEEEcCCcEEEEECCC
Q psy14440 501 HGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFV-GHYSDVDCVQFHP----NSNYVATGSSDRTIRLWDCVT 575 (711)
Q Consensus 501 h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~-~h~~~V~~v~~sp----~~~~latgs~Dg~I~iwD~~~ 575 (711)
|...|++++|+|++.+|++|+.||+|++||+++++.+..+. .|...|.+++|+| ++.+|++|+.||+|++||+++
T Consensus 213 h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 292 (437)
T 3gre_A 213 RHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVK 292 (437)
T ss_dssp GGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTT
T ss_pred CCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCC
Confidence 88999999999999999999999999999999999988886 7888999997665 577999999999999999999
Q ss_pred CcEEEEeeCC--------------------------CCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeC---
Q psy14440 576 GSHVRLLTGH--------------------------KAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTG--- 626 (711)
Q Consensus 576 ~~~v~~~~~h--------------------------~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~--- 626 (711)
++++..+.+| ...|++++|+ ++++|++|+.||.|++||+.+++.+..+.+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~ 371 (437)
T 3gre_A 293 GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSR 371 (437)
T ss_dssp TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--
T ss_pred CcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccc
Confidence 9998887754 4568889999 889999999999999999999887666665
Q ss_pred ----------------------------------CCCCEEEEEEeCC--CCEEEEEeCCCcEEEEe
Q psy14440 627 ----------------------------------HTDVVRALCFSRD--GNILASSGQDCSVKLWD 656 (711)
Q Consensus 627 ----------------------------------h~~~V~sl~fspd--g~~Lasgs~Dg~V~iWd 656 (711)
|.+.|++++|+++ +.+|++|+.||.|+||+
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 372 FSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 8899999999998 77999999999999995
No 66
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.7e-35 Score=328.15 Aligned_cols=277 Identities=19% Similarity=0.195 Sum_probs=226.4
Q ss_pred EEEecCCCceEEEEECC-CCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecc
Q psy14440 381 YTLLNARQQVTCAEISE-DVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGH 459 (711)
Q Consensus 381 ~tl~~h~~~V~~l~fs~-dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h 459 (711)
.+...|...|+|++|+| ++++||+|+.||.|+|||+.+.. ......+.+|
T Consensus 113 ~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~-----------------------------~~~~~~~~gH 163 (435)
T 4e54_B 113 QKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKD-----------------------------KPTFIKGIGA 163 (435)
T ss_dssp CEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCS-----------------------------CCEEECCCSS
T ss_pred ccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCC-----------------------------ceeEEEccCC
Confidence 35678899999999998 56899999999999999986432 2233456789
Q ss_pred cCCEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCeEEEEEecC--CCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCce
Q psy14440 460 EGPVRKLSFSP-DRSLLLSCSQDNTIRLWSLLLWRCLVVYKGH--GHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHP 536 (711)
Q Consensus 460 ~~~V~~l~fsp-dg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h--~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~ 536 (711)
.+.|++|+|+| ++++|++|+.||+|++||+++.........| ...+.+++|++++.+|++|+.||+|++||++. +.
T Consensus 164 ~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~ 242 (435)
T 4e54_B 164 GGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KE 242 (435)
T ss_dssp SCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CB
T ss_pred CCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ce
Confidence 99999999998 7889999999999999999876655444433 44578999999999999999999999999974 56
Q ss_pred eEEeecCCCCeeEEEEcCCCC-EEEEEEcCCcEEEEECCCCcEEEE---eeCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy14440 537 LRLFVGHYSDVDCVQFHPNSN-YVATGSSDRTIRLWDCVTGSHVRL---LTGHKAPVYALSFSVCGRFLASAGGDGNVHM 612 (711)
Q Consensus 537 ~~~~~~h~~~V~~v~~sp~~~-~latgs~Dg~I~iwD~~~~~~v~~---~~~h~~~I~~la~spdg~~Lasgs~Dg~I~i 612 (711)
+..+.+|...|.+++|+|++. +|++|+.|++|+|||+++++.... ..+|...|++++|+|+|++|++|+.||.|+|
T Consensus 243 ~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~i 322 (435)
T 4e54_B 243 LWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRV 322 (435)
T ss_dssp CCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEE
T ss_pred eEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEE
Confidence 778889999999999999875 788999999999999998765443 3579999999999999999999999999999
Q ss_pred EECCCCeEEEEeeCCCC------CEEEEEEeCCCCEEEEEeC------------CCcEEEEeCCCCCCccCccccccccc
Q psy14440 613 WDLSNGHLLTLLTGHTD------VVRALCFSRDGNILASSGQ------------DCSVKLWDFAKLSDEVGTEEVNLSHS 674 (711)
Q Consensus 613 wDl~sg~~i~~l~~h~~------~V~sl~fspdg~~Lasgs~------------Dg~V~iWdl~~~~~~~~~~~~~~~~~ 674 (711)
||+.+++....+..|.. .+....|++++.++++++. +++|++||+.+.
T Consensus 323 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g-------------- 388 (435)
T 4e54_B 323 YSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSG-------------- 388 (435)
T ss_dssp EESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSC--------------
T ss_pred EECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCC--------------
Confidence 99999988887776643 2345678888877777653 357999987642
Q ss_pred cccccccccceeee-cccCCcceEEE-EEccCCeeee-C
Q psy14440 675 ADIKNSSLAYLVRS-YKTKASPLLHL-IFSRRNILLR-G 710 (711)
Q Consensus 675 ~~~~~~~~~~~l~~-~~t~~~pV~~v-~Fs~~n~lla-G 710 (711)
.++.. +..+...|.++ +|++++.+|| |
T Consensus 389 ---------~~~~~l~~~~~~~v~s~~~fspdg~~lasg 418 (435)
T 4e54_B 389 ---------KMMCQLYDPESSGISSLNEFNPMGDTLASA 418 (435)
T ss_dssp ---------CEEEEECCSSCCCCCCEEEECTTSSCEEEE
T ss_pred ---------cEEEEEeCCCCCcEEEEEEECCCCCEEEEE
Confidence 12222 44577788887 6999999998 5
No 67
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.2e-36 Score=326.62 Aligned_cols=272 Identities=14% Similarity=0.122 Sum_probs=222.4
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCC--c-----------eeeeccCccccccccccCCcEEEEEecCCC
Q psy14440 384 LNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQ--K-----------LKAMKSSDQLQDIEMECDDILVRIMDERNA 450 (711)
Q Consensus 384 ~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~--~-----------~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 450 (711)
..+.+.|+|++|++||++||+|+.||.|+||++.+. + +..+.++++...++.++.|+.|++||..++
T Consensus 8 ~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~ 87 (377)
T 3dwl_C 8 HILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPD 87 (377)
T ss_dssp EECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC-----
T ss_pred ecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Confidence 446679999999999999999999999999999765 2 223445566778888999999999999887
Q ss_pred e---eEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe---EEEEEec-CCCCEEEEEEcCCCCEEEEEECC
Q psy14440 451 E---TTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWR---CLVVYKG-HGHPVWDIKFSPHGYYFASAGHD 523 (711)
Q Consensus 451 ~---~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~---~~~~~~~-h~~~V~~v~~sp~g~~l~sgs~D 523 (711)
. ....+.+|.+.|++++|++++++|++|+.|++|++||+.+++ ....+.+ |...|++++|+|++++|++|+.|
T Consensus 88 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d 167 (377)
T 3dwl_C 88 GTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCAD 167 (377)
T ss_dssp -CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESS
T ss_pred CceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCC
Confidence 6 677888999999999999999999999999999999998877 4677877 99999999999999999999999
Q ss_pred CeEEEEECC------------------CCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcE----EEE
Q psy14440 524 RMARLWATD------------------SYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH----VRL 581 (711)
Q Consensus 524 g~i~lwd~~------------------~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~----v~~ 581 (711)
++|++||++ .++.+..+ +|...|.+++|+|++++|++|+.||+|++||+.+++. +..
T Consensus 168 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 246 (377)
T 3dwl_C 168 RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALIT 246 (377)
T ss_dssp SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCC
T ss_pred CEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEe
Confidence 999999985 24455666 8999999999999999999999999999999999987 788
Q ss_pred eeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCe---------------------------------------EEE
Q psy14440 582 LTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGH---------------------------------------LLT 622 (711)
Q Consensus 582 ~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~---------------------------------------~i~ 622 (711)
+.+|...|.+++|+++|++|++|+.++.+ +|+...+. ...
T Consensus 247 ~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (377)
T 3dwl_C 247 VKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFR 325 (377)
T ss_dssp EECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC--------------
T ss_pred ecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeeccccccccccccccccccccccccccccccccccc
Confidence 89999999999999999999999876655 66654211 011
Q ss_pred E-------------eeCCCCCEEEEEEeCC-CC---EEEEEeCCCcEEEEeC
Q psy14440 623 L-------------LTGHTDVVRALCFSRD-GN---ILASSGQDCSVKLWDF 657 (711)
Q Consensus 623 ~-------------l~~h~~~V~sl~fspd-g~---~Lasgs~Dg~V~iWdl 657 (711)
. ...|.+.|+++++.+. +. .|+|||.||+|+|||+
T Consensus 326 ~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 326 NMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp -----------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred chhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 1 0138999999997654 33 6999999999999996
No 68
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.9e-34 Score=315.74 Aligned_cols=278 Identities=23% Similarity=0.348 Sum_probs=240.8
Q ss_pred EEEEecCCCc--eEEEEECCCCCEEEEEeCCCeEEEEeCCCCce------------eeeccCccccccccccCCcEEEEE
Q psy14440 380 CYTLLNARQQ--VTCAEISEDVSILAVGFSESYIKLWSLVPQKL------------KAMKSSDQLQDIEMECDDILVRIM 445 (711)
Q Consensus 380 ~~tl~~h~~~--V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~------------~~~~~~~~~~~l~~~~~d~~i~i~ 445 (711)
.+...+|... +.+++|++ ..+++|+.||.|++|++.+++. ..+.++.+...+++++.++.+++|
T Consensus 84 ~~~~~~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iw 161 (401)
T 4aez_A 84 VLDAPGIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIY 161 (401)
T ss_dssp EEECTTCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeeCCCCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEE
Confidence 4445566665 45566665 4577888999999999976553 334455667778889999999999
Q ss_pred ecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCC
Q psy14440 446 DERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL-LWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDR 524 (711)
Q Consensus 446 d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~-t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg 524 (711)
|..+++....+.+|.+.|.+++| ++++|++|+.||.|++||+. ....+..+.+|...|.+++|++++.+|++|+.||
T Consensus 162 d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~ 239 (401)
T 4aez_A 162 DVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDN 239 (401)
T ss_dssp ETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCC
Confidence 99999999999999999999999 56799999999999999998 5677888999999999999999999999999999
Q ss_pred eEEEEECCCCceeEEeecCCCCeeEEEEcCCC-CEEEEEE--cCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEE
Q psy14440 525 MARLWATDSYHPLRLFVGHYSDVDCVQFHPNS-NYVATGS--SDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFL 601 (711)
Q Consensus 525 ~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~-~~latgs--~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~L 601 (711)
.|++||+++++.+..+.+|...|.+++|+|++ .++++|+ .|+.|++||+.+++.+..+. +...|.+++|+++|++|
T Consensus 240 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l 318 (401)
T 4aez_A 240 VVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEI 318 (401)
T ss_dssp CEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEE
T ss_pred eEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeE
Confidence 99999999999999999999999999999976 4566654 69999999999999998886 66789999999999999
Q ss_pred EEE--eCCCcEEEEECCCCeEEE--EeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCC
Q psy14440 602 ASA--GGDGNVHMWDLSNGHLLT--LLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSD 662 (711)
Q Consensus 602 asg--s~Dg~I~iwDl~sg~~i~--~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~ 662 (711)
+++ +.||.|++||+.+++... .+.+|.+.|.+++|+++|++|++|+.||+|++||+.....
T Consensus 319 ~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 319 MSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDH 383 (401)
T ss_dssp EEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC---
T ss_pred EEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcc
Confidence 995 489999999999976554 4679999999999999999999999999999999986543
No 69
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.3e-34 Score=307.47 Aligned_cols=268 Identities=10% Similarity=0.064 Sum_probs=234.1
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCE
Q psy14440 384 LNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPV 463 (711)
Q Consensus 384 ~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V 463 (711)
.+|.+.|++++|++++++|++|+.||.|+||++.+.. .......+.+|.+.|
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~----------------------------~~~~~~~~~~~~~~v 59 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQA----------------------------KNVDLLQSLRYKHPL 59 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTT----------------------------TEEEEEEEEECSSCE
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCC----------------------------ccccceeeeecCCce
Confidence 5789999999999999999999999999999985432 111234455899999
Q ss_pred EEEEEcCCCC-EEEEEeCCCeEEEEEC-CCCeEEEEEec--CCCCEEEEEEcCCCCEEEEEECCCeEEEEECCC------
Q psy14440 464 RKLSFSPDRS-LLLSCSQDNTIRLWSL-LLWRCLVVYKG--HGHPVWDIKFSPHGYYFASAGHDRMARLWATDS------ 533 (711)
Q Consensus 464 ~~l~fspdg~-~L~s~s~Dg~V~iwdl-~t~~~~~~~~~--h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~------ 533 (711)
++++|+++++ +|++|+.||.|++||+ .+++. ..+.+ |...|++++|++ +.+|++++.|+.|++||+++
T Consensus 60 ~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~ 137 (342)
T 1yfq_A 60 LCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVI 137 (342)
T ss_dssp EEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCE
T ss_pred EEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccc
Confidence 9999999999 9999999999999999 87755 67788 999999999999 99999999999999999987
Q ss_pred ---CceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCC-Cc--EEEEeeCCCCCeEEEEEec-CCCEEEEEeC
Q psy14440 534 ---YHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT-GS--HVRLLTGHKAPVYALSFSV-CGRFLASAGG 606 (711)
Q Consensus 534 ---~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~-~~--~v~~~~~h~~~I~~la~sp-dg~~Lasgs~ 606 (711)
++++..+. |...|.+++|++++ +++|+.|+.|++||+++ +. .......|...|.+++|++ ++++|++|+.
T Consensus 138 ~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~ 214 (342)
T 1yfq_A 138 AVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSI 214 (342)
T ss_dssp EEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEET
T ss_pred cccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEec
Confidence 77676666 88999999999887 99999999999999998 54 3345567889999999999 9999999999
Q ss_pred CCcEEEEECCCC------eEEEEeeCCCC---------CEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCCccCcccccc
Q psy14440 607 DGNVHMWDLSNG------HLLTLLTGHTD---------VVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNL 671 (711)
Q Consensus 607 Dg~I~iwDl~sg------~~i~~l~~h~~---------~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~~~ 671 (711)
||.|++||+..+ +.+..+.+|.. .|++++|++++++|++|+.||.|++||+.+
T Consensus 215 dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~------------ 282 (342)
T 1yfq_A 215 DGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT------------ 282 (342)
T ss_dssp TSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTT------------
T ss_pred CCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCcc------------
Confidence 999999999887 77788888865 999999999999999999999999999864
Q ss_pred ccccccccccccceeeecccC-CcceEEEEEccCCeeee
Q psy14440 672 SHSADIKNSSLAYLVRSYKTK-ASPLLHLIFSRRNILLR 709 (711)
Q Consensus 672 ~~~~~~~~~~~~~~l~~~~t~-~~pV~~v~Fs~~n~lla 709 (711)
...+..+..+ ..+|.+++ +++.+|+
T Consensus 283 -----------~~~~~~~~~~h~~~v~~~~--~~~~~l~ 308 (342)
T 1yfq_A 283 -----------RKKIKNFAKFNEDSVVKIA--CSDNILC 308 (342)
T ss_dssp -----------TEEEEECCCCSSSEEEEEE--ECSSEEE
T ss_pred -----------HhHhhhhhcccCCCceEec--CCCCeEE
Confidence 2335567777 88999999 8888877
No 70
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.1e-33 Score=353.03 Aligned_cols=330 Identities=26% Similarity=0.372 Sum_probs=272.9
Q ss_pred eEEEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceee-----------eccCc--cccccccccCCcEEEE
Q psy14440 378 IACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKA-----------MKSSD--QLQDIEMECDDILVRI 444 (711)
Q Consensus 378 ~~~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~-----------~~~~~--~~~~l~~~~~d~~i~i 444 (711)
.+..++.+|.+.|+|++|++||++||+|+.||.|+|||+.+++... +.++. +...++.++.++.|++
T Consensus 648 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~v 727 (1249)
T 3sfz_A 648 EKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKL 727 (1249)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEE
T ss_pred CEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEE
Confidence 3456778899999999999999999999999999999998765322 22333 3345677888999999
Q ss_pred EecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEe-------------------------
Q psy14440 445 MDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYK------------------------- 499 (711)
Q Consensus 445 ~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~------------------------- 499 (711)
||..+++....+.+|.+.|++++|+|++++|++|+.||+|++||+.++.....+.
T Consensus 728 wd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 807 (1249)
T 3sfz_A 728 WDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWS 807 (1249)
T ss_dssp EETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBC
T ss_pred EECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEEC
Confidence 9999999999999999999999999999999999999999999997765544332
Q ss_pred ------------------------------cCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEeecCCCCeeE
Q psy14440 500 ------------------------------GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC 549 (711)
Q Consensus 500 ------------------------------~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~~~V~~ 549 (711)
+|...|.+++|+|++.++++++.||.|++||+.++..+..+.+|...|.+
T Consensus 808 ~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~ 887 (1249)
T 3sfz_A 808 ADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHG 887 (1249)
T ss_dssp TTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred CCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEE
Confidence 67888999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCEEEEEEcCCcEEEEECC-------------------------------------------------------
Q psy14440 550 VQFHPNSNYVATGSSDRTIRLWDCV------------------------------------------------------- 574 (711)
Q Consensus 550 v~~sp~~~~latgs~Dg~I~iwD~~------------------------------------------------------- 574 (711)
++|+|++++|++++.||+|++||+.
T Consensus 888 v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 967 (1249)
T 3sfz_A 888 VMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCC 967 (1249)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEE
T ss_pred EEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEE
Confidence 9999999999999999888888742
Q ss_pred ------------------------CCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCC
Q psy14440 575 ------------------------TGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDV 630 (711)
Q Consensus 575 ------------------------~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~ 630 (711)
+++.+..+.+|...|++++|+++|++|++|+.||.|++||+.+++.+. +.+|...
T Consensus 968 ~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~-~~~~~~~ 1046 (1249)
T 3sfz_A 968 CLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVF-LQAHQET 1046 (1249)
T ss_dssp EECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEEC-CBCCSSC
T ss_pred EEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEE-EecCCCc
Confidence 334445566799999999999999999999999999999999998764 5679999
Q ss_pred EEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCCccCccc----c---c------------cccccccccccccceeeeccc
Q psy14440 631 VRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEE----V---N------------LSHSADIKNSSLAYLVRSYKT 691 (711)
Q Consensus 631 V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~~~~~~----~---~------------~~~~~~~~~~~~~~~l~~~~t 691 (711)
|.+++|++++ .+++++.||+|++||+.+......... + . ......++.......+..+..
T Consensus 1047 v~~~~~~~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~ 1125 (1249)
T 3sfz_A 1047 VKDFRLLQDS-RLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKG 1125 (1249)
T ss_dssp EEEEEECSSS-EEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCC
T ss_pred EEEEEEcCCC-cEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeecc
Confidence 9999999965 578899999999999987543211100 0 0 001111223334556677888
Q ss_pred CCcceEEEEEccCCeeee
Q psy14440 692 KASPLLHLIFSRRNILLR 709 (711)
Q Consensus 692 ~~~pV~~v~Fs~~n~lla 709 (711)
|..+|.+++|++++.+||
T Consensus 1126 h~~~v~~~~~s~dg~~la 1143 (1249)
T 3sfz_A 1126 HNGCVRCSAFSLDGILLA 1143 (1249)
T ss_dssp CSSCEEEEEECSSSSEEE
T ss_pred CCCcEEEEEECCCCCEEE
Confidence 999999999999999988
No 71
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-34 Score=345.91 Aligned_cols=309 Identities=12% Similarity=0.112 Sum_probs=234.9
Q ss_pred EEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCcee----------------------eeccCc-cccccccc
Q psy14440 380 CYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLK----------------------AMKSSD-QLQDIEME 436 (711)
Q Consensus 380 ~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~----------------------~~~~~~-~~~~l~~~ 436 (711)
+.++ .|.+.|++++|++++++||+|+.||.|++||+.+.++. .+.+++ +...++++
T Consensus 92 ~~~~-~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g 170 (902)
T 2oaj_A 92 LTTV-FVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLIS 170 (902)
T ss_dssp EEEE-ECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEE
T ss_pred EEEE-cCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEE
Confidence 3344 36789999999999999999999999999999876542 122233 34567888
Q ss_pred cCCcEEEEEecCCCeeEEEeecc------------------cCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEE
Q psy14440 437 CDDILVRIMDERNAETTRTLVGH------------------EGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498 (711)
Q Consensus 437 ~~d~~i~i~d~~~~~~~~~l~~h------------------~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~ 498 (711)
+.++.+ +||..+++....+.+| .+.|++++|+|+|++|++|+.||+|++||+.+++++...
T Consensus 171 ~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r 249 (902)
T 2oaj_A 171 YEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMAR 249 (902)
T ss_dssp CSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEE
T ss_pred eCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEE
Confidence 899999 9999999988888766 578999999999999999999999999999998877542
Q ss_pred e-----c-------------CCCCEEEEEEcC----CC-CEEEEEECC--------------------------------
Q psy14440 499 K-----G-------------HGHPVWDIKFSP----HG-YYFASAGHD-------------------------------- 523 (711)
Q Consensus 499 ~-----~-------------h~~~V~~v~~sp----~g-~~l~sgs~D-------------------------------- 523 (711)
. + |...|++++|++ ++ ..+++|+.|
T Consensus 250 ~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~ 329 (902)
T 2oaj_A 250 TVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYA 329 (902)
T ss_dssp CSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHH
T ss_pred eecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhc
Confidence 1 1 244789999953 32 345555433
Q ss_pred --------------------------------------------CeEEEEECCCCceeEE--------------------
Q psy14440 524 --------------------------------------------RMARLWATDSYHPLRL-------------------- 539 (711)
Q Consensus 524 --------------------------------------------g~i~lwd~~~~~~~~~-------------------- 539 (711)
|+|++|++.++.....
T Consensus 330 ~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~ 409 (902)
T 2oaj_A 330 NPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMA 409 (902)
T ss_dssp SCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEE
T ss_pred CccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEE
Confidence 4445555433322111
Q ss_pred ---------------------eecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEE----EE--ee-----CCCC
Q psy14440 540 ---------------------FVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHV----RL--LT-----GHKA 587 (711)
Q Consensus 540 ---------------------~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v----~~--~~-----~h~~ 587 (711)
+.+|...+.+++|+|++++|++|+.|++|++||+.++... .. +. +|..
T Consensus 410 s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~ 489 (902)
T 2oaj_A 410 ASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKEL 489 (902)
T ss_dssp EEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSC
T ss_pred EEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCC
Confidence 1223333444556788999999999999999999887421 11 11 7999
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEEEECCCC---------------------------------------------eEEE
Q psy14440 588 PVYALSFSVCGRFLASAGGDGNVHMWDLSNG---------------------------------------------HLLT 622 (711)
Q Consensus 588 ~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg---------------------------------------------~~i~ 622 (711)
.|++++|+|||++||+|+.||+|+|||+.++ +++.
T Consensus 490 ~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 569 (902)
T 2oaj_A 490 AVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPST 569 (902)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEE
T ss_pred ceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeE
Confidence 9999999999999999999999999999766 3477
Q ss_pred EeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCCccCccccccccccccccccccceeeecc-cCCcceEEEEE
Q psy14440 623 LLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYK-TKASPLLHLIF 701 (711)
Q Consensus 623 ~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-t~~~pV~~v~F 701 (711)
.+.+|.+.|++++||||| +||+|+.||+|+|||+...... ....++.+. +|...|.+|+|
T Consensus 570 ~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~------------------~~~~~~~~~~gh~~~V~sv~F 630 (902)
T 2oaj_A 570 AVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAII------------------YMENIREISGAQSACVTCIEF 630 (902)
T ss_dssp EECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEE------------------EEEEGGGTCSSCCCCEEEEEE
T ss_pred EEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEE------------------EEeehhHhccccccceEEEEE
Confidence 888999999999999999 9999999999999997642110 000113454 88899999999
Q ss_pred c-----cCC---eeee
Q psy14440 702 S-----RRN---ILLR 709 (711)
Q Consensus 702 s-----~~n---~lla 709 (711)
+ +|| .+|+
T Consensus 631 s~~~~~~Dg~~~~~l~ 646 (902)
T 2oaj_A 631 VIMEYGDDGYSSILMV 646 (902)
T ss_dssp EEEECTTSSSEEEEEE
T ss_pred EEEecCCCCCcceEEE
Confidence 9 885 7777
No 72
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5.2e-34 Score=299.63 Aligned_cols=238 Identities=20% Similarity=0.335 Sum_probs=205.0
Q ss_pred EEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCC--CeEEEEEecCCCCEEEEEEcC--CCCEEEEEECCCeEEEE
Q psy14440 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLL--WRCLVVYKGHGHPVWDIKFSP--HGYYFASAGHDRMARLW 529 (711)
Q Consensus 454 ~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t--~~~~~~~~~h~~~V~~v~~sp--~g~~l~sgs~Dg~i~lw 529 (711)
..+.+|.+.|++++|+++|++|++|+.|++|+|||+.. .+.+..+.+|...|++++|++ ++++|++|+.|++|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 35678999999999999999999999999999999974 467889999999999999986 48999999999999999
Q ss_pred ECCCCc--eeEEeecCCCCeeEEEEcCC--CCEEEEEEcCCcEEEEECCCCc--EEEEeeCCCCCeEEEEEecC------
Q psy14440 530 ATDSYH--PLRLFVGHYSDVDCVQFHPN--SNYVATGSSDRTIRLWDCVTGS--HVRLLTGHKAPVYALSFSVC------ 597 (711)
Q Consensus 530 d~~~~~--~~~~~~~h~~~V~~v~~sp~--~~~latgs~Dg~I~iwD~~~~~--~v~~~~~h~~~I~~la~spd------ 597 (711)
|+++++ .+..+.+|...|.+++|+|+ +.+|++|+.|++|++||++++. ....+.+|...|.+++|+|+
T Consensus 83 d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~ 162 (297)
T 2pm7_B 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (297)
T ss_dssp EBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-----
T ss_pred EcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccc
Confidence 998763 56678889999999999997 8999999999999999998763 24667899999999999997
Q ss_pred -------CCEEEEEeCCCcEEEEECCCCe----EEEEeeCCCCCEEEEEEeCCC---CEEEEEeCCCcEEEEeCCCCCCc
Q psy14440 598 -------GRFLASAGGDGNVHMWDLSNGH----LLTLLTGHTDVVRALCFSRDG---NILASSGQDCSVKLWDFAKLSDE 663 (711)
Q Consensus 598 -------g~~Lasgs~Dg~I~iwDl~sg~----~i~~l~~h~~~V~sl~fspdg---~~Lasgs~Dg~V~iWdl~~~~~~ 663 (711)
+++|++|+.||+|+|||+++++ .+..+.+|.+.|++++|+|++ ++|++|+.||+|+|||+......
T Consensus 163 ~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~ 242 (297)
T 2pm7_B 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGP 242 (297)
T ss_dssp -------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC
T ss_pred cCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCc
Confidence 5799999999999999998765 677889999999999999985 89999999999999998752210
Q ss_pred cCccccccccccccccccccceeeecccCCcceEEEEEccCCeeee
Q psy14440 664 VGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
. ...+.....+...|.+++|++++.+||
T Consensus 243 ~------------------~~~~~~~~~~~~~v~~~~~s~~g~~la 270 (297)
T 2pm7_B 243 W------------------KKTLLKEEKFPDVLWRASWSLSGNVLA 270 (297)
T ss_dssp C------------------EEEESSSSCCSSCEEEEEECSSSCCEE
T ss_pred c------------------ceeeeecccCCCcEEEEEECCCCCEEE
Confidence 0 000111234567899999999999888
No 73
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3.1e-33 Score=308.28 Aligned_cols=268 Identities=25% Similarity=0.449 Sum_probs=236.8
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEeCCCCce-------------eeeccCccccccccccCCcEEEEEecCCCeeEEE
Q psy14440 389 QVTCAEISEDVSILAVGFSESYIKLWSLVPQKL-------------KAMKSSDQLQDIEMECDDILVRIMDERNAETTRT 455 (711)
Q Consensus 389 ~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~-------------~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 455 (711)
-+++++||.+ ++||+|. |++|+|||..++++ ..+.+++++..+++++.|+.|++||..+++.++.
T Consensus 107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~ 184 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 184 (420)
T ss_dssp TCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred cceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEE
Confidence 3788999975 5888886 89999999987653 3455667778899999999999999999999999
Q ss_pred eecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCC
Q psy14440 456 LVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLL-WRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSY 534 (711)
Q Consensus 456 l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t-~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~ 534 (711)
+.+|...|.+++|+ +..|++|+.|+.+++||... ...+..+.+|...+..+.|++++.++++++.|+.+++|+..++
T Consensus 185 ~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~ 262 (420)
T 4gga_A 185 MTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPG 262 (420)
T ss_dssp ECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCC
T ss_pred EeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccc
Confidence 99999999999885 67999999999999999976 4566788999999999999999999999999999999999876
Q ss_pred c----eeEEeecCCCCeeEEEEcCCC-CEEEEE--EcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEe--
Q psy14440 535 H----PLRLFVGHYSDVDCVQFHPNS-NYVATG--SSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAG-- 605 (711)
Q Consensus 535 ~----~~~~~~~h~~~V~~v~~sp~~-~~latg--s~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs-- 605 (711)
+ .+.....|...|.+++|+|++ +.++++ +.|++|++||+.+++++..+..| ..+.++.|+++++.|++++
T Consensus 263 ~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~ 341 (420)
T 4gga_A 263 EGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGF 341 (420)
T ss_dssp SSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECT
T ss_pred cccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEec
Confidence 4 456777899999999999965 555554 46999999999999999888754 5689999999999998765
Q ss_pred CCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCC
Q psy14440 606 GDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLS 661 (711)
Q Consensus 606 ~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~ 661 (711)
.||.|+|||+.+++.+..+.+|.+.|++++|+|||++|+|||.||+|+|||+....
T Consensus 342 ~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 342 AQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp TTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 78999999999999999999999999999999999999999999999999997644
No 74
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=2.9e-33 Score=303.59 Aligned_cols=282 Identities=18% Similarity=0.252 Sum_probs=237.2
Q ss_pred EEEEecCCCceEEEEECC-CCCEEEEEeCCCeEEEEeCCCCce------------------------eeeccCc-ccccc
Q psy14440 380 CYTLLNARQQVTCAEISE-DVSILAVGFSESYIKLWSLVPQKL------------------------KAMKSSD-QLQDI 433 (711)
Q Consensus 380 ~~tl~~h~~~V~~l~fs~-dg~~LatG~~dg~I~vWdl~~~~~------------------------~~~~~~~-~~~~l 433 (711)
...+.+|.+.|+|++|++ ++++||+|+.||.|++|++.+... ..+.+.. +...+
T Consensus 36 ~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 115 (408)
T 4a11_B 36 RDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMF 115 (408)
T ss_dssp EEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCE
T ss_pred eeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEE
Confidence 345677999999999999 999999999999999999976432 2233344 44567
Q ss_pred ccccCCcEEEEEecCCCeeEEEeecccCCEEEEEEcCC---CCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEE
Q psy14440 434 EMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPD---RSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKF 510 (711)
Q Consensus 434 ~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~fspd---g~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~ 510 (711)
+.++.++.+++||..+++....+. +...+.++.|++. +.++++++.||.|++||+.+++.+..+.+|...|.+++|
T Consensus 116 ~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~ 194 (408)
T 4a11_B 116 TSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSW 194 (408)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEE
T ss_pred EEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEE
Confidence 788889999999999998887776 7888999999984 459999999999999999999999999999999999999
Q ss_pred cCCCC-EEEEEECCCeEEEEECCCCc-eeEEe---------------ecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEEC
Q psy14440 511 SPHGY-YFASAGHDRMARLWATDSYH-PLRLF---------------VGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573 (711)
Q Consensus 511 sp~g~-~l~sgs~Dg~i~lwd~~~~~-~~~~~---------------~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~ 573 (711)
+|++. .|++|+.||.|++||++++. .+..+ .+|...|.+++|+|++++|++|+.||.|++||+
T Consensus 195 ~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~ 274 (408)
T 4a11_B 195 SPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNS 274 (408)
T ss_dssp CSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEEC
Confidence 99998 59999999999999998765 34443 578899999999999999999999999999999
Q ss_pred CCCcEEEEeeCCC-----CCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeC
Q psy14440 574 VTGSHVRLLTGHK-----APVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQ 648 (711)
Q Consensus 574 ~~~~~v~~~~~h~-----~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~ 648 (711)
.+++....+.++. ..+........+..+++++.||.|++||+.+++.+..+.+|.+.|++++|++++++|++|+.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 354 (408)
T 4a11_B 275 SNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSR 354 (408)
T ss_dssp TTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEET
T ss_pred CCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECC
Confidence 9988765554321 12222222334566777788999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCCCCC
Q psy14440 649 DCSVKLWDFAKLSD 662 (711)
Q Consensus 649 Dg~V~iWdl~~~~~ 662 (711)
||.|++||+.....
T Consensus 355 dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 355 DCNILAWVPSLYEP 368 (408)
T ss_dssp TSCEEEEEECC---
T ss_pred CCeEEEEeCCCCCc
Confidence 99999999987654
No 75
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.9e-33 Score=322.76 Aligned_cols=270 Identities=16% Similarity=0.190 Sum_probs=247.2
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCC----c------------eeeeccCc--cccccccccCCcEEEEEe
Q psy14440 385 NARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQ----K------------LKAMKSSD--QLQDIEMECDDILVRIMD 446 (711)
Q Consensus 385 ~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~----~------------~~~~~~~~--~~~~l~~~~~d~~i~i~d 446 (711)
.|.+.|++++|++||++||+|+ ++.|+||++.+. + +..+..++ +...+++++.++.|++||
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~ 94 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWG 94 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEE
T ss_pred CccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEe
Confidence 5789999999999999999998 789999999765 2 34455667 778888899999999999
Q ss_pred cCCC--------eeEEEeecccCCEEEEEEcCCCCEEEEEeCC----CeEEEEECCCCeEEEEEecCCCCEEEEEEcCCC
Q psy14440 447 ERNA--------ETTRTLVGHEGPVRKLSFSPDRSLLLSCSQD----NTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG 514 (711)
Q Consensus 447 ~~~~--------~~~~~l~~h~~~V~~l~fspdg~~L~s~s~D----g~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g 514 (711)
..++ .....+.+|.+.|.+++|++++++|++++.+ +.|++|| +++.+..+.+|...|++++|+|++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~ 172 (615)
T 1pgu_A 95 WTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSR 172 (615)
T ss_dssp EEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSS
T ss_pred CCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCC
Confidence 8744 6778888999999999999999999999988 6888888 677888999999999999999999
Q ss_pred C-EEEEEECCCeEEEEECCCCceeEEeecCCC---CeeEEEEcCC-CCEEEEEEcCCcEEEEECCCCcEEEEe-e---CC
Q psy14440 515 Y-YFASAGHDRMARLWATDSYHPLRLFVGHYS---DVDCVQFHPN-SNYVATGSSDRTIRLWDCVTGSHVRLL-T---GH 585 (711)
Q Consensus 515 ~-~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~~---~V~~v~~sp~-~~~latgs~Dg~I~iwD~~~~~~v~~~-~---~h 585 (711)
. .+++++.|+.|++||..+++.+..+.+|.. .|.+++|+|+ +++|++|+.||.|++||+.+++.+..+ . +|
T Consensus 173 ~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 252 (615)
T 1pgu_A 173 PMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPV 252 (615)
T ss_dssp SCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCC
T ss_pred CcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEeccccccc
Confidence 7 899999999999999999999999999999 9999999999 999999999999999999999999999 6 89
Q ss_pred CCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCC----CCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 586 KAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGH----TDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 586 ~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h----~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
...|.+++|+ ++++|++++.||.|++||+.+++.+..+..+ ...+.++.|+ +++++++|+.||.|++||+..
T Consensus 253 ~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~ 328 (615)
T 1pgu_A 253 QGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGH 328 (615)
T ss_dssp CSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTE
T ss_pred CCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCC
Confidence 9999999999 9999999999999999999999999999877 3678889987 899999999999999999875
No 76
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.6e-35 Score=326.96 Aligned_cols=306 Identities=13% Similarity=0.103 Sum_probs=231.5
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCc-cccccccccCCcEEEEEecCCCeeEEEee-cccCCE
Q psy14440 386 ARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSD-QLQDIEMECDDILVRIMDERNAETTRTLV-GHEGPV 463 (711)
Q Consensus 386 h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~l~-~h~~~V 463 (711)
-...|.+++|||||+++|+|+.|++|+ +....+ .+..+. ....+.. .-+|.+..|+..+++....+. .|...|
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~--~l~gh~~~v~~V~F-sPdg~~~~~~~~~~~~~~~~~~~~~~~V 88 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAK--DINCNSKNLFHVKE-FPLEFENKLDFELAQQNGLLNSQPVCYP 88 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSEEEE--EECCCS--CCSSBGGGTEEEEE-ECCCCCCTTTTSCCCSSCSSTTSCSCCE
T ss_pred hhccEEEEEECCCCCEEEEEcCCceee--cccccc--eecCCCccEEEEEE-CCCCCcceEEEEeCCCceEeecCCCCcE
Confidence 347899999999999999999999999 543322 221111 1111212 223345555555444333333 668899
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCC-----CEEEEEEcCCCCEEEEEECCCeEEEEECCCCce--
Q psy14440 464 RKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGH-----PVWDIKFSPHGYYFASAGHDRMARLWATDSYHP-- 536 (711)
Q Consensus 464 ~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~-----~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~-- 536 (711)
++++|||||..|++++.||+|++||..+ ++..+. |.. .|.+++|||+|++|++|+.||+|++||+.++..
T Consensus 89 ~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~ 165 (588)
T 2j04_A 89 RVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENT 165 (588)
T ss_dssp EEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTC
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcccc
Confidence 9999999999999999999999999654 666667 665 499999999999999999999999999998752
Q ss_pred -----eEEe----ecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcE---EEEe-eCCCCCeEEEEEecCCCEEEE
Q psy14440 537 -----LRLF----VGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH---VRLL-TGHKAPVYALSFSVCGRFLAS 603 (711)
Q Consensus 537 -----~~~~----~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~---v~~~-~~h~~~I~~la~spdg~~Las 603 (711)
+..+ .+|...|.+++|+|+| +++++.|++|++||+.++.. .+++ .+|...|.+++|+ |++||+
T Consensus 166 ~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LAS 241 (588)
T 2j04_A 166 PEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVL 241 (588)
T ss_dssp CCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEE
T ss_pred ccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEE
Confidence 5666 6778899999999999 88899999999999988773 3566 4788999999999 689999
Q ss_pred EeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEE--eCCCCEEEEEeCCCcEEEEeCCCCCCccCcccccc---ccccccc
Q psy14440 604 AGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCF--SRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNL---SHSADIK 678 (711)
Q Consensus 604 gs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~f--spdg~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~~~---~~~~~~~ 678 (711)
++ +|+|++||+.+++......+|.+.|++++| ++++..|++++.||+ ++|.+.... ......-. .....++
T Consensus 242 a~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~~~--~spd~~l~a~~d~~v~lW 317 (588)
T 2j04_A 242 TC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDELH--VTADNIIAPYLEKKFKKW 317 (588)
T ss_dssp EC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSSEE--EECCCSSHHHHHHHHHHT
T ss_pred Ee-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeeccEE--ECCCceEEEEcCCEEEEE
Confidence 97 699999999988875545489999999999 999999999999999 999987422 11110000 0001111
Q ss_pred cccccceeeecccCCcceEEEEEccCCeeee
Q psy14440 679 NSSLAYLVRSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 679 ~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
......+..+.+ ...|++|+|||||.++|
T Consensus 318 -~~~g~~l~~~~~-~~~I~~va~SPdG~~lA 346 (588)
T 2j04_A 318 -STIWNEFNNYET-TLVIHGISLSPDGYSIA 346 (588)
T ss_dssp -TTTTTSSSSSCC-EEEEEEEEECTTSSEEE
T ss_pred -ECCCCceeeecc-ceEEEEEEECCCCCEEE
Confidence 112222444544 66799999999999998
No 77
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=6.4e-33 Score=307.58 Aligned_cols=271 Identities=23% Similarity=0.436 Sum_probs=245.7
Q ss_pred EEEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccC---------ccccccccccCCcEEEEEecCC
Q psy14440 379 ACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSS---------DQLQDIEMECDDILVRIMDERN 449 (711)
Q Consensus 379 ~~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~---------~~~~~l~~~~~d~~i~i~d~~~ 449 (711)
+..++.+|.+.|++++|+ +++|++|+.||.|++||+.+++....... .+...+++++.++.+++||..+
T Consensus 151 ~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~ 228 (445)
T 2ovr_B 151 CLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET 228 (445)
T ss_dssp EEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSS
T ss_pred EEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCC
Confidence 456778999999999998 67999999999999999987653322111 1234578888999999999999
Q ss_pred CeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEE
Q psy14440 450 AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLW 529 (711)
Q Consensus 450 ~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lw 529 (711)
++....+.+|.+.|.+++| ++++|++|+.||.|++||+.+++.+..+.+|...|.++.| ++.++++|+.||.|++|
T Consensus 229 ~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~ 304 (445)
T 2ovr_B 229 GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVW 304 (445)
T ss_dssp CCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEE
T ss_pred CcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEE
Confidence 9999999999999999999 7889999999999999999999999999999999999999 78899999999999999
Q ss_pred ECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeC---CCCCeEEEEEecCCCEEEEEeC
Q psy14440 530 ATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTG---HKAPVYALSFSVCGRFLASAGG 606 (711)
Q Consensus 530 d~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~---h~~~I~~la~spdg~~Lasgs~ 606 (711)
|+++++.+..+.+|...+.++.++ ++++++|+.||.|++||+++++.+..+.+ |...|++++|+ +++|++|+.
T Consensus 305 d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~ 380 (445)
T 2ovr_B 305 DVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSD 380 (445)
T ss_dssp ETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEET
T ss_pred ECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeC
Confidence 999999999999999999998885 67999999999999999999999999986 88899999995 789999999
Q ss_pred CCcEEEEECCCCeEEEEe-----eCCCCCEEEEEEeCCCCEEEEEeCCCc----EEEEeCCC
Q psy14440 607 DGNVHMWDLSNGHLLTLL-----TGHTDVVRALCFSRDGNILASSGQDCS----VKLWDFAK 659 (711)
Q Consensus 607 Dg~I~iwDl~sg~~i~~l-----~~h~~~V~sl~fspdg~~Lasgs~Dg~----V~iWdl~~ 659 (711)
||.|++||+.+++.+..+ .+|.+.|++++|++++.+|++|+.||+ |.|||+..
T Consensus 381 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 381 DGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp TSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred CCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 999999999999999888 478889999999999999999999998 99999975
No 78
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.6e-33 Score=310.24 Aligned_cols=268 Identities=28% Similarity=0.550 Sum_probs=236.6
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCC
Q psy14440 383 LLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGP 462 (711)
Q Consensus 383 l~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~ 462 (711)
..+|...|+|++| |+++|++|+.||.|++||+. +++....+.+|.+.
T Consensus 129 ~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~-------------------------------~~~~~~~~~~h~~~ 175 (435)
T 1p22_A 129 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKN-------------------------------TLECKRILTGHTGS 175 (435)
T ss_dssp CCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESS-------------------------------SCCEEEEECCCSSC
T ss_pred ccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCC-------------------------------CCeEEEEEcCCCCc
Confidence 4567788999988 78999999999999999984 34456678899999
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCcee---EE
Q psy14440 463 VRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPL---RL 539 (711)
Q Consensus 463 V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~---~~ 539 (711)
|.+++| ++++|++|+.||+|++||+.+++.+..+.+|...|.+++|+ +.++++|+.||+|++||++++... ..
T Consensus 176 v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~ 251 (435)
T 1p22_A 176 VLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRV 251 (435)
T ss_dssp EEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEE
T ss_pred EEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeE
Confidence 999999 78899999999999999999999999999999999999997 459999999999999999987765 67
Q ss_pred eecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCe
Q psy14440 540 FVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGH 619 (711)
Q Consensus 540 ~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~ 619 (711)
+.+|...|.+++| ++++|++|+.||+|++||+++++.+..+.+|...|.+++|+ +++|++|+.||.|++||+++++
T Consensus 252 ~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~ 327 (435)
T 1p22_A 252 LVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGA 327 (435)
T ss_dssp ECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCC
T ss_pred ecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCC
Confidence 7899999999999 68899999999999999999999999999999999999994 7899999999999999999999
Q ss_pred EEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCCccCccccccccccccccccccceeeecccCCcceEEE
Q psy14440 620 LLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHL 699 (711)
Q Consensus 620 ~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v 699 (711)
.+..+.+|.+.|.+++| ++++|++|+.||+|++||+........ ......+..+..|..+|.++
T Consensus 328 ~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~--------------~~~~~~~~~~~~h~~~v~~l 391 (435)
T 1p22_A 328 CLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRA--------------PAGTLCLRTLVEHSGRVFRL 391 (435)
T ss_dssp EEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTS--------------CTTTTEEEEECCCSSCCCCE
T ss_pred EEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccc--------------cccchheeeccCCCCCeEEE
Confidence 99999999999999999 789999999999999999865332111 11233667788999999999
Q ss_pred EEccCCeeee
Q psy14440 700 IFSRRNILLR 709 (711)
Q Consensus 700 ~Fs~~n~lla 709 (711)
+| ++.+|+
T Consensus 392 ~~--~~~~l~ 399 (435)
T 1p22_A 392 QF--DEFQIV 399 (435)
T ss_dssp EE--CSSCEE
T ss_pred Ee--CCCEEE
Confidence 99 455555
No 79
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=3e-33 Score=298.67 Aligned_cols=278 Identities=16% Similarity=0.253 Sum_probs=235.5
Q ss_pred CceEEEEEecCCCceEEEEECCC---CCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCee
Q psy14440 376 PSIACYTLLNARQQVTCAEISED---VSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAET 452 (711)
Q Consensus 376 ps~~~~tl~~h~~~V~~l~fs~d---g~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 452 (711)
|...+..+.+|.+.|+|++|+++ |++||+|+.||.|+||++.+. ....
T Consensus 28 ~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~-----------------------------~~~~ 78 (368)
T 3mmy_A 28 PMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDS-----------------------------GQTI 78 (368)
T ss_dssp TTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTT-----------------------------SCEE
T ss_pred CcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCC-----------------------------Ccee
Confidence 44455677899999999999999 699999999999999998531 1122
Q ss_pred EEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEE--cCCCCEEEEEECCCeEEEEE
Q psy14440 453 TRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKF--SPHGYYFASAGHDRMARLWA 530 (711)
Q Consensus 453 ~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~--sp~g~~l~sgs~Dg~i~lwd 530 (711)
...+.+|.+.|++++|++++++|++|+.||+|++||+.+++.+. +.+|...|++++| ++++.+|++++.||.|++||
T Consensus 79 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd 157 (368)
T 3mmy_A 79 PKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWD 157 (368)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEEC
T ss_pred EEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEE
Confidence 36677899999999999999999999999999999999998776 5569999999999 88999999999999999999
Q ss_pred CCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEe--eCCCCCeEEEEEecCCCE----EEEE
Q psy14440 531 TDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLL--TGHKAPVYALSFSVCGRF----LASA 604 (711)
Q Consensus 531 ~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~--~~h~~~I~~la~spdg~~----Lasg 604 (711)
+++++.+..+..+. .+.++.+. +..+++++.++.+++||+......... ..+...+.++++.+++.. +++|
T Consensus 158 ~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (368)
T 3mmy_A 158 TRSSNPMMVLQLPE-RCYCADVI--YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALG 234 (368)
T ss_dssp SSCSSCSEEEECSS-CEEEEEEE--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEE
T ss_pred CCCCcEEEEEecCC-CceEEEec--CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEe
Confidence 99999998888765 56666665 458999999999999999877544332 234566777777776655 9999
Q ss_pred eCCCcEEEEECCCC---eEEEEeeCCCC------------CEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCCccCcccc
Q psy14440 605 GGDGNVHMWDLSNG---HLLTLLTGHTD------------VVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEV 669 (711)
Q Consensus 605 s~Dg~I~iwDl~sg---~~i~~l~~h~~------------~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~ 669 (711)
+.||.|++||+..+ ..+..+.+|.. .|++++|++++++|++|+.||.|++||+.+
T Consensus 235 ~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~---------- 304 (368)
T 3mmy_A 235 SIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDA---------- 304 (368)
T ss_dssp ETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTT----------
T ss_pred cCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCC----------
Confidence 99999999999987 56777787775 799999999999999999999999999864
Q ss_pred ccccccccccccccceeeecccCCcceEEEEEccCCeeee
Q psy14440 670 NLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 670 ~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
..++..+..+..+|.+++|++++.+||
T Consensus 305 -------------~~~~~~~~~~~~~v~~~~~s~~g~~l~ 331 (368)
T 3mmy_A 305 -------------RTKLKTSEQLDQPISACCFNHNGNIFA 331 (368)
T ss_dssp -------------TEEEEECCCCSSCEEEEEECTTSSCEE
T ss_pred -------------CcEEEEecCCCCCceEEEECCCCCeEE
Confidence 234566788899999999999999988
No 80
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-34 Score=342.57 Aligned_cols=251 Identities=25% Similarity=0.351 Sum_probs=221.8
Q ss_pred EEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeeccc
Q psy14440 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHE 460 (711)
Q Consensus 381 ~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~ 460 (711)
..+.+|.+.|+|++|+++|++||+|+.||.|+||++.+ .++.....+.+|.
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~-----------------------------~~~~~~~~l~~h~ 53 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEG-----------------------------ETHKLIDTLTGHE 53 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEET-----------------------------TEEEEEEEECCCS
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCC-----------------------------CCCccceeccCCc
Confidence 45789999999999999999999999999999999742 1334567788999
Q ss_pred CCEEEEEEcCC--CCEEEEEeCCCeEEEEECCCCe--EEEEEecCCCCEEEEEEcCC--CCEEEEEECCCeEEEEECCCC
Q psy14440 461 GPVRKLSFSPD--RSLLLSCSQDNTIRLWSLLLWR--CLVVYKGHGHPVWDIKFSPH--GYYFASAGHDRMARLWATDSY 534 (711)
Q Consensus 461 ~~V~~l~fspd--g~~L~s~s~Dg~V~iwdl~t~~--~~~~~~~h~~~V~~v~~sp~--g~~l~sgs~Dg~i~lwd~~~~ 534 (711)
+.|++++|+++ +++|++|+.||+|++||+.+++ .+..+.+|...|++++|+|+ +.++++|+.||+|++||++++
T Consensus 54 ~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 54 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp SCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred CceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 99999999988 9999999999999999999887 77788899999999999999 999999999999999999877
Q ss_pred --ceeEEeecCCCCeeEEEEcC-------------CCCEEEEEEcCCcEEEEECCCC----cEEEEeeCCCCCeEEEEEe
Q psy14440 535 --HPLRLFVGHYSDVDCVQFHP-------------NSNYVATGSSDRTIRLWDCVTG----SHVRLLTGHKAPVYALSFS 595 (711)
Q Consensus 535 --~~~~~~~~h~~~V~~v~~sp-------------~~~~latgs~Dg~I~iwD~~~~----~~v~~~~~h~~~I~~la~s 595 (711)
.....+.+|...|.+++|+| ++.+|++|+.||+|++||++++ ..+..+.+|.+.|++++|+
T Consensus 134 ~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~s 213 (753)
T 3jro_A 134 GTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS 213 (753)
T ss_dssp SCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC
T ss_pred CCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEec
Confidence 34556778999999999999 5899999999999999999887 5667788999999999999
Q ss_pred cC---CCEEEEEeCCCcEEEEECCCCe-----EEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q psy14440 596 VC---GRFLASAGGDGNVHMWDLSNGH-----LLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKL 660 (711)
Q Consensus 596 pd---g~~Lasgs~Dg~I~iwDl~sg~-----~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~ 660 (711)
|+ |++|++|+.||.|++||+.+++ .+....+|.+.|++++|+++|++|++|+.||.|++||+...
T Consensus 214 p~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 214 PTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp CCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred cCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence 99 9999999999999999998864 33334568889999999999999999999999999999853
No 81
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2e-33 Score=301.61 Aligned_cols=253 Identities=18% Similarity=0.212 Sum_probs=221.2
Q ss_pred EEEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeec
Q psy14440 379 ACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVG 458 (711)
Q Consensus 379 ~~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~ 458 (711)
+..++.+|...|++++|++++++|++|+.||.|++|++.+.+. .....+.+
T Consensus 44 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~-----------------------------~~~~~~~~ 94 (372)
T 1k8k_C 44 QVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW-----------------------------KPTLVILR 94 (372)
T ss_dssp EEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEE-----------------------------EEEEECCC
T ss_pred eeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCee-----------------------------eeeEEeec
Confidence 5667889999999999999999999999999999999854321 12334567
Q ss_pred ccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe---EEE-EEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECC--
Q psy14440 459 HEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWR---CLV-VYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATD-- 532 (711)
Q Consensus 459 h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~---~~~-~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~-- 532 (711)
|.+.|.+++|++++++|++|+.||.|++||+.... ... ...+|...|.+++|++++++|++++.||.|++||++
T Consensus 95 ~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~ 174 (372)
T 1k8k_C 95 INRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIK 174 (372)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCT
T ss_pred CCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccc
Confidence 89999999999999999999999999999998765 233 336789999999999999999999999999999953
Q ss_pred ----------------CCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEec
Q psy14440 533 ----------------SYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSV 596 (711)
Q Consensus 533 ----------------~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~sp 596 (711)
.++.+..+.+|...|.+++|+|++++|++++.||.|++||+++++.+..+.+|...|.+++|++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~ 254 (372)
T 1k8k_C 175 EVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFIT 254 (372)
T ss_dssp TTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEE
T ss_pred cccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEec
Confidence 6778888889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCcEEEEECCC--CeE--------------------------------E------EEe-eCCCCCEEEEE
Q psy14440 597 CGRFLASAGGDGNVHMWDLSN--GHL--------------------------------L------TLL-TGHTDVVRALC 635 (711)
Q Consensus 597 dg~~Lasgs~Dg~I~iwDl~s--g~~--------------------------------i------~~l-~~h~~~V~sl~ 635 (711)
+|++|++| .||.|++||+.+ ++. . ..+ .+|.+.|++++
T Consensus 255 ~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 333 (372)
T 1k8k_C 255 ESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQIS 333 (372)
T ss_dssp TTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEE
T ss_pred CCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeE
Confidence 99998888 899999999987 531 1 223 48999999999
Q ss_pred Ee-CCC---CEEEEEeCCCcEEEEeCCCCC
Q psy14440 636 FS-RDG---NILASSGQDCSVKLWDFAKLS 661 (711)
Q Consensus 636 fs-pdg---~~Lasgs~Dg~V~iWdl~~~~ 661 (711)
|+ ++| ++|++|+.||+|++||+.+..
T Consensus 334 ~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 334 VLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp EEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred EecCCCcceeeEEEecCCCceEEEEecChh
Confidence 76 676 999999999999999987543
No 82
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-32 Score=292.31 Aligned_cols=267 Identities=17% Similarity=0.248 Sum_probs=240.6
Q ss_pred CCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEE
Q psy14440 418 PQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497 (711)
Q Consensus 418 ~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~ 497 (711)
...+..+.++.+...+++++.++.|++||..+++....+.+|.+.|++++|++++++|++++.||+|++||+.+++.+..
T Consensus 32 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 111 (369)
T 3zwl_B 32 ERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVAT 111 (369)
T ss_dssp SSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred eceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 34455566667777888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCEEEEEEcCCCCEEEEEECC-----CeEEEEECCCCc-----------eeEEeecCCC--CeeEEEEcCCCCEE
Q psy14440 498 YKGHGHPVWDIKFSPHGYYFASAGHD-----RMARLWATDSYH-----------PLRLFVGHYS--DVDCVQFHPNSNYV 559 (711)
Q Consensus 498 ~~~h~~~V~~v~~sp~g~~l~sgs~D-----g~i~lwd~~~~~-----------~~~~~~~h~~--~V~~v~~sp~~~~l 559 (711)
+. +...|.+++|++++.++++++.+ +.|++||+.... .+..+..|.. .+.+++|++++++|
T Consensus 112 ~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 190 (369)
T 3zwl_B 112 WK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYI 190 (369)
T ss_dssp EE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEE
T ss_pred ee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEE
Confidence 88 89999999999999999999999 999999987653 3445556666 89999999999999
Q ss_pred EEEEcCCcEEEEECCC-CcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeC
Q psy14440 560 ATGSSDRTIRLWDCVT-GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSR 638 (711)
Q Consensus 560 atgs~Dg~I~iwD~~~-~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fsp 638 (711)
++|+.||.|++||+++ ++.+..+..|...|.+++|++++++|++++.||.|++||+.+++.+..+. +...+.+++|++
T Consensus 191 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~ 269 (369)
T 3zwl_B 191 IAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVITP 269 (369)
T ss_dssp EEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECS
T ss_pred EEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-CCCCceeEEecC
Confidence 9999999999999999 78889999999999999999999999999999999999999999998888 778899999999
Q ss_pred CCCEEEEEeCCC--------------cEEEEeCCCCCCccCccccccccccccccccccceeeecccCCcceEEEEEccC
Q psy14440 639 DGNILASSGQDC--------------SVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRR 704 (711)
Q Consensus 639 dg~~Lasgs~Dg--------------~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~ 704 (711)
+++++++++.++ .|++||+.. ...+..+..|...|.+++|+++
T Consensus 270 ~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~-----------------------~~~~~~~~~~~~~v~~~~~s~~ 326 (369)
T 3zwl_B 270 LKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIF-----------------------EEEIGRVQGHFGPLNTVAISPQ 326 (369)
T ss_dssp SSSEEEEEECCC-------------CEEEEEETTT-----------------------CCEEEEEECCSSCEEEEEECTT
T ss_pred CCceEEEeecCCCceEEEEecCCCcceeEEEecCC-----------------------CcchhheecccCcEEEEEECCC
Confidence 999999999998 677777643 3445667889999999999999
Q ss_pred Ceeee
Q psy14440 705 NILLR 709 (711)
Q Consensus 705 n~lla 709 (711)
+.+|+
T Consensus 327 ~~~l~ 331 (369)
T 3zwl_B 327 GTSYA 331 (369)
T ss_dssp SSEEE
T ss_pred CCEEE
Confidence 99887
No 83
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.8e-33 Score=308.05 Aligned_cols=271 Identities=18% Similarity=0.270 Sum_probs=232.6
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEeCCCCcee-----------eeccCccccccccccCCcEEEEEecCCCeeEEEe
Q psy14440 388 QQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLK-----------AMKSSDQLQDIEMECDDILVRIMDERNAETTRTL 456 (711)
Q Consensus 388 ~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~-----------~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l 456 (711)
..+.+..|++++++||+|+.||.|++|++.+.+.. .+.++++...++.++.++.|++||..+++....+
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 177 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTL 177 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEE
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEE
Confidence 44566688999999999999999999998765433 3445566777888999999999999999999999
Q ss_pred ecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEec---CCCCEEEEE---------------------EcC
Q psy14440 457 VGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKG---HGHPVWDIK---------------------FSP 512 (711)
Q Consensus 457 ~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~---h~~~V~~v~---------------------~sp 512 (711)
.+|.+.|++++|++++++|++|+.||+|++||+.+++.+..+.. |...|.+++ |++
T Consensus 178 ~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 257 (420)
T 3vl1_A 178 IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT 257 (420)
T ss_dssp ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC
Confidence 99999999999999999999999999999999999999999875 344455554 578
Q ss_pred CCCEEEEEECCCeEEEEECCCCceeEEee-cCCCCeeEEEEcCCCC-EEEEEEcCCcEEEEECCCCcE-EEEeeC-CCCC
Q psy14440 513 HGYYFASAGHDRMARLWATDSYHPLRLFV-GHYSDVDCVQFHPNSN-YVATGSSDRTIRLWDCVTGSH-VRLLTG-HKAP 588 (711)
Q Consensus 513 ~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~-~h~~~V~~v~~sp~~~-~latgs~Dg~I~iwD~~~~~~-v~~~~~-h~~~ 588 (711)
++++|++|+.||.|++||+++++.+..+. +|...|.+++|+|++. +|++|+.||.|++||+++++. +..+.+ |...
T Consensus 258 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 337 (420)
T 3vl1_A 258 YGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTP 337 (420)
T ss_dssp TTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSC
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCC
Confidence 89999999999999999999988777664 5888999999999998 999999999999999998854 677766 6777
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEEECCCC---------eEEEEeeCCCCCEEEEEEeCCCC---EEEEEeCCCcEEEEe
Q psy14440 589 VYALSFSVCGRFLASAGGDGNVHMWDLSNG---------HLLTLLTGHTDVVRALCFSRDGN---ILASSGQDCSVKLWD 656 (711)
Q Consensus 589 I~~la~spdg~~Lasgs~Dg~I~iwDl~sg---------~~i~~l~~h~~~V~sl~fspdg~---~Lasgs~Dg~V~iWd 656 (711)
|+++.+ +++++|++|+.||.|++||+... .....+.+|.+.|.+++|++++. .|+++|.+|.+.+|+
T Consensus 338 v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~ 416 (420)
T 3vl1_A 338 INNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYN 416 (420)
T ss_dssp EEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEE
T ss_pred ceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEe
Confidence 888855 57899999999999999998763 12234567888999999999999 788888899999999
Q ss_pred CCC
Q psy14440 657 FAK 659 (711)
Q Consensus 657 l~~ 659 (711)
+.+
T Consensus 417 ~~~ 419 (420)
T 3vl1_A 417 LSN 419 (420)
T ss_dssp SCC
T ss_pred ccC
Confidence 864
No 84
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.6e-32 Score=287.96 Aligned_cols=266 Identities=24% Similarity=0.421 Sum_probs=230.6
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEeCCCCcee-------------eeccCccccccccccCCcEEEEEecCCCeeEEEe
Q psy14440 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQKLK-------------AMKSSDQLQDIEMECDDILVRIMDERNAETTRTL 456 (711)
Q Consensus 390 V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~-------------~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l 456 (711)
+++++||+++ +||+|. |++|+|||+.++++. .+.++.+...++.++.|+.|++|+..+++.+..+
T Consensus 28 ~~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp CBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe
Confidence 5789999886 888875 899999999876532 3445566778889999999999999999999999
Q ss_pred ecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-eEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Q psy14440 457 VGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLW-RCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYH 535 (711)
Q Consensus 457 ~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~-~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~ 535 (711)
.+|...+.++++ ++..+++++.++.+++|+.... ..+..+.+|...+.++.|+++++++++++.||+|++||+++++
T Consensus 106 ~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 183 (318)
T 4ggc_A 106 TSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 183 (318)
T ss_dssp ECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBT
T ss_pred cCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCc
Confidence 999999887766 5679999999999999999765 5567788999999999999999999999999999999998765
Q ss_pred e----eEEeecCCCCeeEEEEcCCCCEE---EEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEe--C
Q psy14440 536 P----LRLFVGHYSDVDCVQFHPNSNYV---ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAG--G 606 (711)
Q Consensus 536 ~----~~~~~~h~~~V~~v~~sp~~~~l---atgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs--~ 606 (711)
. ......+.+.|.++++++++..+ ++++.+++|++||...+....... +...+..++|+++++.+++++ .
T Consensus 184 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~ 262 (318)
T 4ggc_A 184 GGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFA 262 (318)
T ss_dssp TBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTT
T ss_pred ccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEEcC
Confidence 3 44556788899999999976533 356678999999999888766654 777899999999999888765 7
Q ss_pred CCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q psy14440 607 DGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKL 660 (711)
Q Consensus 607 Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~ 660 (711)
||.|+|||+.+++.+..+.+|.+.|++++|+++|++|+|||.||+|+|||+..+
T Consensus 263 d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 263 QNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp TCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred CCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 899999999999999999999999999999999999999999999999999753
No 85
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.1e-33 Score=304.91 Aligned_cols=279 Identities=14% Similarity=0.205 Sum_probs=230.5
Q ss_pred ceeeeccCccccccccccCCcEEEEEecCCCe------eEEEeecccCCEEEEEEcCC----C---CEEEEEeCCCeEEE
Q psy14440 420 KLKAMKSSDQLQDIEMECDDILVRIMDERNAE------TTRTLVGHEGPVRKLSFSPD----R---SLLLSCSQDNTIRL 486 (711)
Q Consensus 420 ~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~------~~~~l~~h~~~V~~l~fspd----g---~~L~s~s~Dg~V~i 486 (711)
.+..+.+++ ..++.++.++.|++|+..+++ ....+.+|...|++++|+++ + ++|++++.||+|++
T Consensus 18 ~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~i 95 (397)
T 1sq9_A 18 DIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLF 95 (397)
T ss_dssp CEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEE
T ss_pred CeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEE
Confidence 344444444 678888999999999998887 78889999999999999999 9 99999999999999
Q ss_pred EECCCCeE-----EEEEecC-----CCCEEEEEEc----CCCCE-EEEEECCCeEEEEECCC------CceeE-----Ee
Q psy14440 487 WSLLLWRC-----LVVYKGH-----GHPVWDIKFS----PHGYY-FASAGHDRMARLWATDS------YHPLR-----LF 540 (711)
Q Consensus 487 wdl~t~~~-----~~~~~~h-----~~~V~~v~~s----p~g~~-l~sgs~Dg~i~lwd~~~------~~~~~-----~~ 540 (711)
||+.+++. +..+..| ...|++++|+ +++.+ |++++.||.|++||+++ ++.+. .+
T Consensus 96 w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 175 (397)
T 1sq9_A 96 YRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLEL 175 (397)
T ss_dssp EEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEE
T ss_pred EEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCccee
Confidence 99988876 8888888 5999999999 99999 99999999999999998 66665 66
Q ss_pred e-------cCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeC---C---CCCeEEEEEecCCCEEEEEeCC
Q psy14440 541 V-------GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTG---H---KAPVYALSFSVCGRFLASAGGD 607 (711)
Q Consensus 541 ~-------~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~---h---~~~I~~la~spdg~~Lasgs~D 607 (711)
. .|...|.+++|+|++ +|++|+.||.|++||+++++.+..+.+ | ...|.+++|++++++|++|+.|
T Consensus 176 ~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d 254 (397)
T 1sq9_A 176 QGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDS 254 (397)
T ss_dssp EEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEE
T ss_pred eeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecC
Confidence 4 488999999999999 999999999999999999999999998 9 9999999999999999999999
Q ss_pred ---CcEEEEECCCCeEEEEeeC-------------CCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCCccCcccc--
Q psy14440 608 ---GNVHMWDLSNGHLLTLLTG-------------HTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEV-- 669 (711)
Q Consensus 608 ---g~I~iwDl~sg~~i~~l~~-------------h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~-- 669 (711)
|.|++||+.+++.+..+.+ |...|.+++|++++++|++|+.||.|+|||+............
T Consensus 255 ~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 334 (397)
T 1sq9_A 255 NSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCD 334 (397)
T ss_dssp TTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGG
T ss_pred CCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccC
Confidence 9999999999999999998 9999999999999999999999999999999764321110000
Q ss_pred ccccccccccccccceeeecccCCcceEEEEEccCC
Q psy14440 670 NLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRN 705 (711)
Q Consensus 670 ~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n 705 (711)
...+..+ ...........|..+|.+++|++++
T Consensus 335 ~~~~~~~----~~~g~~~~~~~~~~~v~~~~~~~~g 366 (397)
T 1sq9_A 335 DIEIEED----ILAVDEHGDSLAEPGVFDVKFLKKG 366 (397)
T ss_dssp GCSSGGG----CCCBCTTSCBCSSCCEEEEEEECTT
T ss_pred cccchhh----hhccccccccccCCceeEEEecccc
Confidence 0000000 0000001122348899999999997
No 86
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.2e-33 Score=310.72 Aligned_cols=263 Identities=27% Similarity=0.469 Sum_probs=228.4
Q ss_pred CceEEEEEecCCCceEEEEECCC-CCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEE
Q psy14440 376 PSIACYTLLNARQQVTCAEISED-VSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTR 454 (711)
Q Consensus 376 ps~~~~tl~~h~~~V~~l~fs~d-g~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 454 (711)
+.+......+|.+.|++++|+++ +.+||+|+.||.|+||++........ .........
T Consensus 117 ~~~~~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~---------------------~~~~~~~~~ 175 (430)
T 2xyi_A 117 GKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPE---------------------PSGECQPDL 175 (430)
T ss_dssp -CEEEEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCC---------------------TTCCCCCSE
T ss_pred CceEEEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccC---------------------ccccCCCcE
Confidence 44556778899999999999997 78999999999999999864211100 001234566
Q ss_pred EeecccCCEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCeE-------EEEEecCCCCEEEEEEcC-CCCEEEEEECCCe
Q psy14440 455 TLVGHEGPVRKLSFSPDRS-LLLSCSQDNTIRLWSLLLWRC-------LVVYKGHGHPVWDIKFSP-HGYYFASAGHDRM 525 (711)
Q Consensus 455 ~l~~h~~~V~~l~fspdg~-~L~s~s~Dg~V~iwdl~t~~~-------~~~~~~h~~~V~~v~~sp-~g~~l~sgs~Dg~ 525 (711)
.+.+|.+.|++++|++++. +|++|+.||+|++|++.++.. ...+.+|...|.+++|+| ++.+|++++.||.
T Consensus 176 ~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~ 255 (430)
T 2xyi_A 176 RLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQK 255 (430)
T ss_dssp EEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred EecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCe
Confidence 7889999999999999998 999999999999999987322 456778999999999999 7789999999999
Q ss_pred EEEEECCCC---ceeEEeecCCCCeeEEEEcCCCC-EEEEEEcCCcEEEEECCC-CcEEEEeeCCCCCeEEEEEecCCC-
Q psy14440 526 ARLWATDSY---HPLRLFVGHYSDVDCVQFHPNSN-YVATGSSDRTIRLWDCVT-GSHVRLLTGHKAPVYALSFSVCGR- 599 (711)
Q Consensus 526 i~lwd~~~~---~~~~~~~~h~~~V~~v~~sp~~~-~latgs~Dg~I~iwD~~~-~~~v~~~~~h~~~I~~la~spdg~- 599 (711)
|++||+++. +.+..+..|...|++++|+|++. +|++|+.||+|++||+++ +..+..+.+|...|++++|+|+++
T Consensus 256 i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~ 335 (430)
T 2xyi_A 256 LMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 335 (430)
T ss_dssp EEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTT
T ss_pred EEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCC
Confidence 999999987 57778889999999999999887 688999999999999998 567889999999999999999985
Q ss_pred EEEEEeCCCcEEEEECCC--------------CeEEEEeeCCCCCEEEEEEeCCCC-EEEEEeCCCcEEEEeCCC
Q psy14440 600 FLASAGGDGNVHMWDLSN--------------GHLLTLLTGHTDVVRALCFSRDGN-ILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 600 ~Lasgs~Dg~I~iwDl~s--------------g~~i~~l~~h~~~V~sl~fspdg~-~Lasgs~Dg~V~iWdl~~ 659 (711)
+|++|+.||.|+|||+.. .+.+..+.+|.+.|++++|++++. +|++++.||.|+||++..
T Consensus 336 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 336 ILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp EEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred EEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 799999999999999987 367888889999999999999999 999999999999999975
No 87
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.4e-33 Score=308.53 Aligned_cols=274 Identities=16% Similarity=0.252 Sum_probs=229.7
Q ss_pred ceEEEEECCCCCEE-EEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEEEE
Q psy14440 389 QVTCAEISEDVSIL-AVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLS 467 (711)
Q Consensus 389 ~V~~l~fs~dg~~L-atG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~ 467 (711)
...+++++++...+ ++|+.||.|+||++..... .......+.+|.+.|++++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~---------------------------~~~~~~~~~~h~~~V~~~~ 88 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGR---------------------------VDKNVPLVCGHTAPVLDIA 88 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEE---------------------------CCTTCCCBCCCSSCEEEEE
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCC---------------------------CCCCCceEecCCCCEEEEE
Confidence 45568888887544 4578899999999853210 0112345678999999999
Q ss_pred EcC-CCCEEEEEeCCCeEEEEECCCC-------eEEEEEecCCCCEEEEEEcCCC-CEEEEEECCCeEEEEECCCCceeE
Q psy14440 468 FSP-DRSLLLSCSQDNTIRLWSLLLW-------RCLVVYKGHGHPVWDIKFSPHG-YYFASAGHDRMARLWATDSYHPLR 538 (711)
Q Consensus 468 fsp-dg~~L~s~s~Dg~V~iwdl~t~-------~~~~~~~~h~~~V~~v~~sp~g-~~l~sgs~Dg~i~lwd~~~~~~~~ 538 (711)
|++ ++++|++|+.||+|++||+.++ +.+..+.+|...|++++|+|++ ++|++|+.||+|++||+++++.+.
T Consensus 89 ~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 168 (402)
T 2aq5_A 89 WCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVL 168 (402)
T ss_dssp ECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred eCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccE
Confidence 999 9999999999999999999887 6678899999999999999998 699999999999999999999999
Q ss_pred Ee--ecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEe-eCCCCC-eEEEEEecCCCEEEEE---eCCCcEE
Q psy14440 539 LF--VGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLL-TGHKAP-VYALSFSVCGRFLASA---GGDGNVH 611 (711)
Q Consensus 539 ~~--~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~-~~h~~~-I~~la~spdg~~Lasg---s~Dg~I~ 611 (711)
.+ .+|...|.+++|+|++++|++|+.||+|++||+++++.+..+ .+|.+. +.+++|+++|++|++| +.||.|+
T Consensus 169 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~ 248 (402)
T 2aq5_A 169 TLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVA 248 (402)
T ss_dssp EECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEE
T ss_pred EEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEE
Confidence 98 789999999999999999999999999999999999999998 788776 8999999999999999 7999999
Q ss_pred EEECCCCeE-EEEee-CCCCCEEEEEEeCCCCEEEE-EeCCCcEEEEeCCCCCCccCccccccccccccccccccceeee
Q psy14440 612 MWDLSNGHL-LTLLT-GHTDVVRALCFSRDGNILAS-SGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRS 688 (711)
Q Consensus 612 iwDl~sg~~-i~~l~-~h~~~V~sl~fspdg~~Las-gs~Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 688 (711)
+||+++++. +.... .|...|.+++|++++++|++ |+.||.|++||+..... ....+..
T Consensus 249 iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~-------------------~~~~l~~ 309 (402)
T 2aq5_A 249 LWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP-------------------FLHYLSM 309 (402)
T ss_dssp EEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT-------------------CEEEEEE
T ss_pred EEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc-------------------ceEeecc
Confidence 999998754 33333 56778999999999999875 55799999999975321 0112233
Q ss_pred cccCCcceEEEEEccCCeeee
Q psy14440 689 YKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 689 ~~t~~~pV~~v~Fs~~n~lla 709 (711)
+. +..+|.+++|++++.+++
T Consensus 310 ~~-~~~~v~~~~~sp~~~~~~ 329 (402)
T 2aq5_A 310 FS-SKESQRGMGYMPKRGLEV 329 (402)
T ss_dssp EC-CSSCCSEEEECCGGGSCG
T ss_pred cc-cCCcccceEEecccccce
Confidence 33 567899999999988876
No 88
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-34 Score=323.93 Aligned_cols=259 Identities=11% Similarity=0.090 Sum_probs=214.0
Q ss_pred EEEEecCCCceEEEEECCC------CCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeE
Q psy14440 380 CYTLLNARQQVTCAEISED------VSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETT 453 (711)
Q Consensus 380 ~~tl~~h~~~V~~l~fs~d------g~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 453 (711)
..++.+|.+.|++++|+|+ +.+||+|+.||+|+||++........ .. . ......
T Consensus 200 ~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~----------------~~--~--~~~~p~ 259 (524)
T 2j04_B 200 VQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVH----------------VF--K--MCEKPS 259 (524)
T ss_dssp EEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSS----------------EE--E--CCCSCS
T ss_pred EEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccc----------------cc--e--eecCce
Confidence 4567788899999999997 57999999999999999965431100 00 0 011223
Q ss_pred EEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe-EEEEEecCCCCEEEE--EEcCCC-CEEEEEECCCeEEEE
Q psy14440 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWR-CLVVYKGHGHPVWDI--KFSPHG-YYFASAGHDRMARLW 529 (711)
Q Consensus 454 ~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~-~~~~~~~h~~~V~~v--~~sp~g-~~l~sgs~Dg~i~lw 529 (711)
..+.+|.+.|++++|++++ .|++|+.||+|++||+.++. ....+.+|...|++| +|+++| ++|++|+.|++|++|
T Consensus 260 ~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklW 338 (524)
T 2j04_B 260 LTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIF 338 (524)
T ss_dssp EEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEE
T ss_pred EEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEE
Confidence 5678999999999999864 89999999999999998764 445688999999999 578887 899999999999999
Q ss_pred ECCCCceeEEeecCCC--CeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCC
Q psy14440 530 ATDSYHPLRLFVGHYS--DVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGD 607 (711)
Q Consensus 530 d~~~~~~~~~~~~h~~--~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~D 607 (711)
|+++++.+..+.+|.. .|.+++|+|++..+++++.|++|++||++++.++..+.+|.+.|++++|+|+|++|++|+.|
T Consensus 339 D~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~D 418 (524)
T 2j04_B 339 NPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSAD 418 (524)
T ss_dssp CGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETT
T ss_pred ECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECC
Confidence 9998888777777764 58899999999999999999999999999999989999999999999999999999999999
Q ss_pred CcEEEEECCC--------------------------------------------CeEEEEeeCCCCCEEEEEEeCCC---
Q psy14440 608 GNVHMWDLSN--------------------------------------------GHLLTLLTGHTDVVRALCFSRDG--- 640 (711)
Q Consensus 608 g~I~iwDl~s--------------------------------------------g~~i~~l~~h~~~V~sl~fspdg--- 640 (711)
|+|++||+.. |..+..+.+|.+.|++++|+|++
T Consensus 419 gtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~ 498 (524)
T 2j04_B 419 GSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGG 498 (524)
T ss_dssp TEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTT
T ss_pred CEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCcc
Confidence 9999997421 12233455788899999999995
Q ss_pred CEEEEEeCCCcEEEEeCCC
Q psy14440 641 NILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 641 ~~Lasgs~Dg~V~iWdl~~ 659 (711)
.+||+|+.||+||||++..
T Consensus 499 ~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 499 KCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp TEEEEECTTSEEEEEECSC
T ss_pred HHHHhhccCceEEEEEccc
Confidence 4999999999999999875
No 89
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.5e-32 Score=320.79 Aligned_cols=285 Identities=27% Similarity=0.379 Sum_probs=227.4
Q ss_pred CceeeeccCcc-ccccccccCCcEEEEEecCC-----CeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q psy14440 419 QKLKAMKSSDQ-LQDIEMECDDILVRIMDERN-----AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLW 492 (711)
Q Consensus 419 ~~~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~-----~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~ 492 (711)
..+..+..+.+ ...++.++.|+.|++|+..+ +...+.+.+|.+.|.+++|++++++|++|+.||+|+|||+.++
T Consensus 383 ~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~ 462 (694)
T 3dm0_A 383 DMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAG 462 (694)
T ss_dssp SCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred ceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 33444444433 35678899999999999764 3456788999999999999999999999999999999999999
Q ss_pred eEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEe---ecCCCCeeEEEEcCCC--CEEEEEEcCCc
Q psy14440 493 RCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLF---VGHYSDVDCVQFHPNS--NYVATGSSDRT 567 (711)
Q Consensus 493 ~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~---~~h~~~V~~v~~sp~~--~~latgs~Dg~ 567 (711)
.++..+.+|...|++++|++++++|++|+.|++|++||.......... .+|...|.|++|+|++ .+|++|+.|++
T Consensus 463 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~ 542 (694)
T 3dm0_A 463 VSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKT 542 (694)
T ss_dssp EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSC
T ss_pred cceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCe
Confidence 999999999999999999999999999999999999998765433332 3688899999999986 68999999999
Q ss_pred EEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEe
Q psy14440 568 IRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSG 647 (711)
Q Consensus 568 I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs 647 (711)
|++||++++++...+.+|.+.|++++|+|+|++|++|+.||+|+|||+.+++.+..+.. ...|.+++|++++.+|++++
T Consensus 543 v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~ 621 (694)
T 3dm0_A 543 VKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NSVIHALCFSPNRYWLCAAT 621 (694)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC-SSCEEEEEECSSSSEEEEEE
T ss_pred EEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC-CCcEEEEEEcCCCcEEEEEc
Confidence 99999999999999999999999999999999999999999999999999999888765 46799999999999888766
Q ss_pred CCCcEEEEeCCCCCCccCccccccccccccccccccceeeecccCCcceEEEEEccCCeeee
Q psy14440 648 QDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 648 ~Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
|+.|+|||+.+........ ......... ...........+...|.+++|++++.+|+
T Consensus 622 -~~~i~iwd~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~spdg~~l~ 678 (694)
T 3dm0_A 622 -EHGIKIWDLESKSIVEDLK---VDLKAEAEK-ADNSGPAATKRKVIYCTSLNWSADGSTLF 678 (694)
T ss_dssp -TTEEEEEETTTTEEEEEEC---CCCC-----------------CCCCEEEEEECTTSSEEE
T ss_pred -CCCEEEEECCCCCChhhhc---ccccccccc-ccccccccCCceeEEeeeEEEcCCCCEEE
Confidence 6679999998643211100 000000000 00000001122233578999999999998
No 90
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.2e-33 Score=299.82 Aligned_cols=270 Identities=18% Similarity=0.282 Sum_probs=231.8
Q ss_pred CceeeeccCc----cccccccccCCcEEEEEecCCCeeEEEeec-----ccCCEEEEEEcCC----CCEEEEEeCCCeEE
Q psy14440 419 QKLKAMKSSD----QLQDIEMECDDILVRIMDERNAETTRTLVG-----HEGPVRKLSFSPD----RSLLLSCSQDNTIR 485 (711)
Q Consensus 419 ~~~~~~~~~~----~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~-----h~~~V~~l~fspd----g~~L~s~s~Dg~V~ 485 (711)
..+..+.+++ ....+..++.++.|++|+..+++....+.. |.+.|++++|+++ +.+|++|+.||+|+
T Consensus 19 ~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~ 98 (366)
T 3k26_A 19 QPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIR 98 (366)
T ss_dssp SCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEE
T ss_pred CceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEE
Confidence 3444444543 233456666677999999988877777664 5578999999998 67999999999999
Q ss_pred EEECCCCeEEEEEecCCCCEEEEEEcC-CCCEEEEEECCCeEEEEECCCCceeEEe---ecCCCCeeEEEEcCCCCEEEE
Q psy14440 486 LWSLLLWRCLVVYKGHGHPVWDIKFSP-HGYYFASAGHDRMARLWATDSYHPLRLF---VGHYSDVDCVQFHPNSNYVAT 561 (711)
Q Consensus 486 iwdl~t~~~~~~~~~h~~~V~~v~~sp-~g~~l~sgs~Dg~i~lwd~~~~~~~~~~---~~h~~~V~~v~~sp~~~~lat 561 (711)
+||+.+++.+..+.+|...|.+++|+| ++.+|++|+.||+|++||+++++.+..+ .+|...|.+++|+|++++|++
T Consensus 99 v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 178 (366)
T 3k26_A 99 IINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMS 178 (366)
T ss_dssp EECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEE
T ss_pred EEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEE
Confidence 999999999999999999999999999 8999999999999999999999988888 689999999999999999999
Q ss_pred EEcCCcEEEEECCCCcEEEEee----------------------------CCCCCeEEEEEecCCCEEEEEeCCCcEEEE
Q psy14440 562 GSSDRTIRLWDCVTGSHVRLLT----------------------------GHKAPVYALSFSVCGRFLASAGGDGNVHMW 613 (711)
Q Consensus 562 gs~Dg~I~iwD~~~~~~v~~~~----------------------------~h~~~I~~la~spdg~~Lasgs~Dg~I~iw 613 (711)
|+.||.|++||+++++.+..+. +|...|.+++|+ +++|++++.||.|++|
T Consensus 179 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~w 256 (366)
T 3k26_A 179 CGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCW 256 (366)
T ss_dssp EETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEE
T ss_pred ecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEE
Confidence 9999999999999876544333 499999999999 7899999999999999
Q ss_pred ECCCCe--------------EEEEeeCCCCCEEEEEEeCC--CCEEEEEeCCCcEEEEeCCCCCCccCcccccccccccc
Q psy14440 614 DLSNGH--------------LLTLLTGHTDVVRALCFSRD--GNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADI 677 (711)
Q Consensus 614 Dl~sg~--------------~i~~l~~h~~~V~sl~fspd--g~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~ 677 (711)
|+.+++ .+..+.+|...|++++|+++ +++|++|+.||.|++||+.....
T Consensus 257 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~--------------- 321 (366)
T 3k26_A 257 KPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDP--------------- 321 (366)
T ss_dssp EESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSG---------------
T ss_pred eCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCC---------------
Confidence 998763 48888999999999999999 99999999999999999976321
Q ss_pred ccccccceeeecccC--CcceEEEEEccCCeeee
Q psy14440 678 KNSSLAYLVRSYKTK--ASPLLHLIFSRRNILLR 709 (711)
Q Consensus 678 ~~~~~~~~l~~~~t~--~~pV~~v~Fs~~n~lla 709 (711)
....+..+..+ ..+|.+++|++++.+|+
T Consensus 322 ----~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 351 (366)
T 3k26_A 322 ----HKAKCTTLTHHKCGAAIRQTSFSRDSSILI 351 (366)
T ss_dssp ----GGCEEEEECCTTCCSCEEEEEECTTSSEEE
T ss_pred ----ccccceEEcccccCCceEEEEeCCCCCeEE
Confidence 11233456666 78999999999999887
No 91
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=8.8e-34 Score=300.76 Aligned_cols=236 Identities=22% Similarity=0.359 Sum_probs=198.6
Q ss_pred EeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe--EEEEEecCCCCEEEEEEcC--CCCEEEEEECCCeEEEEE
Q psy14440 455 TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWR--CLVVYKGHGHPVWDIKFSP--HGYYFASAGHDRMARLWA 530 (711)
Q Consensus 455 ~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~--~~~~~~~h~~~V~~v~~sp--~g~~l~sgs~Dg~i~lwd 530 (711)
.+.+|.+.|++++|+++|++|++|+.|++|++||+.++. .+..+.+|...|++++|++ ++++|++|+.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 456899999999999999999999999999999998765 4678899999999999986 489999999999999999
Q ss_pred CCCC--ceeEEeecCCCCeeEEEEcCC--CCEEEEEEcCCcEEEEECCCCcE---EEEeeCCCCCeEEEEEecC------
Q psy14440 531 TDSY--HPLRLFVGHYSDVDCVQFHPN--SNYVATGSSDRTIRLWDCVTGSH---VRLLTGHKAPVYALSFSVC------ 597 (711)
Q Consensus 531 ~~~~--~~~~~~~~h~~~V~~v~~sp~--~~~latgs~Dg~I~iwD~~~~~~---v~~~~~h~~~I~~la~spd------ 597 (711)
++++ ..+..+.+|...|.+++|+|+ +.+|++|+.|++|++||++++.. ...+.+|...|.+++|+|+
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 167 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSL 167 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC---
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccc
Confidence 9876 456678899999999999997 78999999999999999987642 3456789999999999997
Q ss_pred -----------CCEEEEEeCCCcEEEEECCCC---eEEEEeeCCCCCEEEEEEeCCC----CEEEEEeCCCcEEEEeCCC
Q psy14440 598 -----------GRFLASAGGDGNVHMWDLSNG---HLLTLLTGHTDVVRALCFSRDG----NILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 598 -----------g~~Lasgs~Dg~I~iwDl~sg---~~i~~l~~h~~~V~sl~fspdg----~~Lasgs~Dg~V~iWdl~~ 659 (711)
+++|++|+.||+|++||+..+ +.+..+.+|.+.|++++|+|++ ++|++|+.||+|+|||+..
T Consensus 168 ~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 168 IDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp ---CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred cccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 478999999999999999765 5677889999999999999986 8999999999999999875
Q ss_pred CCCccCccccccccccccccccccceeeecccCCcceEEEEEccCCeeee
Q psy14440 660 LSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
..... .....+..+...|.+|+|++++.+||
T Consensus 248 ~~~~~-------------------~~~~~~~~~~~~v~~v~~sp~g~~la 278 (316)
T 3bg1_A 248 ASSNT-------------------WSPKLLHKFNDVVWHVSWSITANILA 278 (316)
T ss_dssp TTCCC-------------------CBCCEEEECSSCEEEEEECTTTCCEE
T ss_pred ccccc-------------------hhhhhhhcCCCcEEEEEEcCCCCEEE
Confidence 32100 00112344678999999999999887
No 92
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-32 Score=303.41 Aligned_cols=301 Identities=14% Similarity=0.108 Sum_probs=230.6
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEeCCCCc---eeee-ccCcc-------------ccccccccCCcE---------
Q psy14440 388 QQVTCAEISEDVSILAVGFSESYIKLWSLVPQK---LKAM-KSSDQ-------------LQDIEMECDDIL--------- 441 (711)
Q Consensus 388 ~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~---~~~~-~~~~~-------------~~~l~~~~~d~~--------- 441 (711)
..++|++|++||++|+++ .++.|++|++.+++ .... ..... ...+.....+..
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 578999999999977666 57899999987766 2211 11100 000000000000
Q ss_pred EEEEecCCCeeEEEeecccCCEEEEEEcCCCCEE-EEEeCCCeEEEEECC--CCeEEEEEe--cCCCCEEEEEEcCCCCE
Q psy14440 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLL-LSCSQDNTIRLWSLL--LWRCLVVYK--GHGHPVWDIKFSPHGYY 516 (711)
Q Consensus 442 i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L-~s~s~Dg~V~iwdl~--t~~~~~~~~--~h~~~V~~v~~sp~g~~ 516 (711)
+.--............+|.+.|++++|++++++| ++|+.||+|++||+. +++++..+. .|...|.+++|+|++.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 163 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT 163 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE
Confidence 0000000001112334678899999999999996 899999999999999 888888876 56789999999999999
Q ss_pred EEEEECCCeEEEEECCCCceeE----EeecCCCCeeEEEEcCC---CCEEEEEEcCCcEEEEECCCCcEEEE-eeCCCCC
Q psy14440 517 FASAGHDRMARLWATDSYHPLR----LFVGHYSDVDCVQFHPN---SNYVATGSSDRTIRLWDCVTGSHVRL-LTGHKAP 588 (711)
Q Consensus 517 l~sgs~Dg~i~lwd~~~~~~~~----~~~~h~~~V~~v~~sp~---~~~latgs~Dg~I~iwD~~~~~~v~~-~~~h~~~ 588 (711)
|++|+.||.+++|++.++.... .+.+|...|.+++|+|+ +++|++|+.|++|++||+.+++.+.. +.+|.+.
T Consensus 164 l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~ 243 (450)
T 2vdu_B 164 VIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHF 243 (450)
T ss_dssp EEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSC
T ss_pred EEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCc
Confidence 9999999999999998876554 77889999999999999 99999999999999999999998887 5589999
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCC-------------------------CCCEEEEEEeCCCCEE
Q psy14440 589 VYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGH-------------------------TDVVRALCFSRDGNIL 643 (711)
Q Consensus 589 I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h-------------------------~~~V~sl~fspdg~~L 643 (711)
|++++|+ +|++|++|+.||.|++||+.+++.+..+..+ ...|.+++|++++++|
T Consensus 244 v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 322 (450)
T 2vdu_B 244 VSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFV 322 (450)
T ss_dssp EEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEE
T ss_pred eEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEE
Confidence 9999999 9999999999999999999999998888632 3579999999999999
Q ss_pred EEEe-CCCcEEEEeCCCCCCccCccccccccccccccccccceeeecccCCcceEEEEEccCCeeee
Q psy14440 644 ASSG-QDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 644 asgs-~Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
++++ .|+.|+|||+..... .....+..+..+ ..|.+++|++++++++
T Consensus 323 ~~~~~~d~~i~iw~~~~~~~------------------~~l~~~~~~~~~-~~v~~~~~~~~~~~v~ 370 (450)
T 2vdu_B 323 AFFVEATKCIIILEMSEKQK------------------GDLALKQIITFP-YNVISLSAHNDEFQVT 370 (450)
T ss_dssp EEEETTCSEEEEEEECSSST------------------TCEEEEEEEECS-SCEEEEEEETTEEEEE
T ss_pred EEEECCCCeEEEEEeccCCC------------------CceeeccEeccC-CceEEEEecCCcEEEE
Confidence 9999 899999999921100 011334456666 7899999999777766
No 93
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-31 Score=280.63 Aligned_cols=261 Identities=20% Similarity=0.294 Sum_probs=233.4
Q ss_pred CCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---e
Q psy14440 417 VPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLW---R 493 (711)
Q Consensus 417 ~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~---~ 493 (711)
....+..+.+ .+...++.++.++.|++||..++.....+..|.+.|.+++|++++++|++|+.||.|++|++... +
T Consensus 17 h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~ 95 (313)
T 3odt_A 17 HDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGED 95 (313)
T ss_dssp CSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSC
T ss_pred CCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCC
Confidence 3444555555 56677889999999999999999999999999999999999999999999999999999998653 6
Q ss_pred EEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEeecCCCCeeEEEEcC-CCCEEEEEEcCCcEEEEE
Q psy14440 494 CLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHP-NSNYVATGSSDRTIRLWD 572 (711)
Q Consensus 494 ~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp-~~~~latgs~Dg~I~iwD 572 (711)
.+..+.+|...|.+++| ++.++++++.||.|++|| .+..+..+..|...+.+++|++ +++++++++.||.|++||
T Consensus 96 ~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d 171 (313)
T 3odt_A 96 PLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ 171 (313)
T ss_dssp C-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred cccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe
Confidence 67788999999999999 577999999999999999 6678888999999999999998 999999999999999999
Q ss_pred CCCCcEEEEeeC-CCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCc
Q psy14440 573 CVTGSHVRLLTG-HKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCS 651 (711)
Q Consensus 573 ~~~~~~v~~~~~-h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~ 651 (711)
.++.+..+.. |...|.+++|++++. +++|+.||.|++||+++++.+..+.+|.+.|++++|++++ .|++|+.||.
T Consensus 172 --~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~ 247 (313)
T 3odt_A 172 --NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRT 247 (313)
T ss_dssp --TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSE
T ss_pred --cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCE
Confidence 5677778877 999999999999998 8999999999999999999999999999999999999999 5889999999
Q ss_pred EEEEeCCCCCCccCccccccccccccccccccceeeecccCCcceEEEEEccCCeeee
Q psy14440 652 VKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 652 V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
|++||+.+. ..+..+..+..+|.+++|++++.+++
T Consensus 248 v~iwd~~~~-----------------------~~~~~~~~~~~~i~~~~~~~~~~~~~ 282 (313)
T 3odt_A 248 VRIWSKENG-----------------------SLKQVITLPAISIWSVDCMSNGDIIV 282 (313)
T ss_dssp EEEECTTTC-----------------------CEEEEEECSSSCEEEEEECTTSCEEE
T ss_pred EEEEECCCC-----------------------ceeEEEeccCceEEEEEEccCCCEEE
Confidence 999998752 24456777888999999999998776
No 94
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4.9e-32 Score=322.53 Aligned_cols=246 Identities=22% Similarity=0.330 Sum_probs=229.6
Q ss_pred EeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe
Q psy14440 414 WSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWR 493 (711)
Q Consensus 414 Wdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~ 493 (711)
+.-.+..+..+.++++...+++++.++.|++||..+++....+.+|.+.|++++|++++++|++|+.||.|++||+.+++
T Consensus 9 ~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~ 88 (814)
T 3mkq_A 9 FSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE 88 (814)
T ss_dssp EEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC
T ss_pred eecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc
Confidence 33344556677778888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCC-ceeEEeecCCCCeeEEEEcC-CCCEEEEEEcCCcEEEE
Q psy14440 494 CLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSY-HPLRLFVGHYSDVDCVQFHP-NSNYVATGSSDRTIRLW 571 (711)
Q Consensus 494 ~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~-~~~~~~~~h~~~V~~v~~sp-~~~~latgs~Dg~I~iw 571 (711)
.+..+.+|...|++++|+|++.+|++++.||+|++||++++ .....+.+|...|.+++|+| ++++|++|+.||+|++|
T Consensus 89 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vw 168 (814)
T 3mkq_A 89 KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVW 168 (814)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEE
T ss_pred EEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 99999999999999999999999999999999999999987 66778889999999999999 88999999999999999
Q ss_pred ECCCCcEEEEeeCCC-CCeEEEEEec--CCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeC
Q psy14440 572 DCVTGSHVRLLTGHK-APVYALSFSV--CGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQ 648 (711)
Q Consensus 572 D~~~~~~v~~~~~h~-~~I~~la~sp--dg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~ 648 (711)
|+.++.....+..+. ..+.+++|++ ++.+|++|+.||.|++||+.+++.+..+.+|.+.|.+++|+++|++|++|+.
T Consensus 169 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 248 (814)
T 3mkq_A 169 SLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSE 248 (814)
T ss_dssp ETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEET
T ss_pred ECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeC
Confidence 999988877777655 8999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCC
Q psy14440 649 DCSVKLWDFAK 659 (711)
Q Consensus 649 Dg~V~iWdl~~ 659 (711)
||+|++||+.+
T Consensus 249 dg~v~vwd~~~ 259 (814)
T 3mkq_A 249 DGTLKIWNSST 259 (814)
T ss_dssp TSCEEEEETTT
T ss_pred CCeEEEEECCC
Confidence 99999999875
No 95
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.9e-33 Score=303.68 Aligned_cols=246 Identities=18% Similarity=0.204 Sum_probs=213.0
Q ss_pred EEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCC--eeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy14440 411 IKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNA--ETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWS 488 (711)
Q Consensus 411 I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~--~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwd 488 (711)
..++.+....+..+.++++...++.++.++.|++|+..++ +....+.+|.+.|++++|++++++|++|+.||+|++||
T Consensus 4 ~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd 83 (377)
T 3dwl_C 4 SQVLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYE 83 (377)
T ss_dssp EEEEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC-
T ss_pred ceeEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 3466666677788888888889999999999999999888 77888999999999999999999999999999999999
Q ss_pred CCCCe---EEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCc---eeEEeec-CCCCeeEEEEcCCCCEEEE
Q psy14440 489 LLLWR---CLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYH---PLRLFVG-HYSDVDCVQFHPNSNYVAT 561 (711)
Q Consensus 489 l~t~~---~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~---~~~~~~~-h~~~V~~v~~sp~~~~lat 561 (711)
+.++. ....+.+|...|++++|+|++++|++|+.|++|++||+++++ ....+.+ |...|.+++|+|++++|++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~ 163 (377)
T 3dwl_C 84 KRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAA 163 (377)
T ss_dssp -----CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEE
T ss_pred cCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEE
Confidence 99876 677788899999999999999999999999999999999876 4677777 9999999999999999999
Q ss_pred EEcCCcEEEEECC------------------CCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeE---
Q psy14440 562 GSSDRTIRLWDCV------------------TGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHL--- 620 (711)
Q Consensus 562 gs~Dg~I~iwD~~------------------~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~--- 620 (711)
|+.||+|++||+. .++++..+ +|.+.|++++|+|+|++|++|+.||.|++||+.+++.
T Consensus 164 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~ 242 (377)
T 3dwl_C 164 GCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPR 242 (377)
T ss_dssp EESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEE
T ss_pred EeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcce
Confidence 9999999999985 35567777 8999999999999999999999999999999999887
Q ss_pred -EEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCC
Q psy14440 621 -LTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFA 658 (711)
Q Consensus 621 -i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~ 658 (711)
+..+.+|...|.+++|+++|++|++|+.|+.+ +|+..
T Consensus 243 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 243 ALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp ECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred eeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 78889999999999999999999998766555 77765
No 96
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-32 Score=292.64 Aligned_cols=240 Identities=21% Similarity=0.339 Sum_probs=210.4
Q ss_pred eEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECC--CCeEEEEEecCCCCEEEEEEcCC--CCEEEEEECCCeEE
Q psy14440 452 TTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL--LWRCLVVYKGHGHPVWDIKFSPH--GYYFASAGHDRMAR 527 (711)
Q Consensus 452 ~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~--t~~~~~~~~~h~~~V~~v~~sp~--g~~l~sgs~Dg~i~ 527 (711)
....+.+|.+.|++++|++++++|++|+.||+|++||+. +++.+..+.+|...|++++|+++ +.+|++|+.||.|+
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~ 82 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 82 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEE
Confidence 456678999999999999999999999999999999998 67788889999999999999976 89999999999999
Q ss_pred EEECCCCc--eeEEeecCCCCeeEEEEcCC--CCEEEEEEcCCcEEEEECCCCc--EEEEeeCCCCCeEEEEEec-----
Q psy14440 528 LWATDSYH--PLRLFVGHYSDVDCVQFHPN--SNYVATGSSDRTIRLWDCVTGS--HVRLLTGHKAPVYALSFSV----- 596 (711)
Q Consensus 528 lwd~~~~~--~~~~~~~h~~~V~~v~~sp~--~~~latgs~Dg~I~iwD~~~~~--~v~~~~~h~~~I~~la~sp----- 596 (711)
+||+++++ .+..+.+|...|.+++|+|+ +++|++|+.||+|++||++++. ....+.+|...|++++|+|
T Consensus 83 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 162 (379)
T 3jrp_A 83 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 162 (379)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC---
T ss_pred EEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccc
Confidence 99999887 77788889999999999999 9999999999999999999873 4556778999999999999
Q ss_pred --------CCCEEEEEeCCCcEEEEECCCCe----EEEEeeCCCCCEEEEEEeCC---CCEEEEEeCCCcEEEEeCCCCC
Q psy14440 597 --------CGRFLASAGGDGNVHMWDLSNGH----LLTLLTGHTDVVRALCFSRD---GNILASSGQDCSVKLWDFAKLS 661 (711)
Q Consensus 597 --------dg~~Lasgs~Dg~I~iwDl~sg~----~i~~l~~h~~~V~sl~fspd---g~~Lasgs~Dg~V~iWdl~~~~ 661 (711)
++.+|++|+.||.|++||+++++ .+..+.+|.+.|.+++|+++ +++|++|+.||.|++||+....
T Consensus 163 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 163 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp -------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred cccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCC
Confidence 69999999999999999998754 56778899999999999999 8999999999999999997633
Q ss_pred CccCccccccccccccccccccceeeecccCCcceEEEEEccCCeeee
Q psy14440 662 DEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
.. ....+.....+...|.+++|++++.+|+
T Consensus 243 ~~------------------~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 272 (379)
T 3jrp_A 243 GP------------------WKKTLLKEEKFPDVLWRASWSLSGNVLA 272 (379)
T ss_dssp SC------------------CEEEESSSSCCSSCEEEEEECSSSCCEE
T ss_pred cc------------------ceeeeeccccCCCcEEEEEEcCCCCEEE
Confidence 21 0112222344778999999999999887
No 97
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.5e-32 Score=291.01 Aligned_cols=286 Identities=14% Similarity=0.197 Sum_probs=231.5
Q ss_pred CceeeeccCcccccc-ccccC---CcEEEEEecCCCeeEEE-eecccCCEEEEEEcCC---CCEEEEEeCCCeEEEEECC
Q psy14440 419 QKLKAMKSSDQLQDI-EMECD---DILVRIMDERNAETTRT-LVGHEGPVRKLSFSPD---RSLLLSCSQDNTIRLWSLL 490 (711)
Q Consensus 419 ~~~~~~~~~~~~~~l-~~~~~---d~~i~i~d~~~~~~~~~-l~~h~~~V~~l~fspd---g~~L~s~s~Dg~V~iwdl~ 490 (711)
..+..+.++++...+ +.++. ++.|++||..+++.... ..+|.+.|++++|+++ +.+|++|+.||.|++||+.
T Consensus 19 ~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 98 (357)
T 3i2n_A 19 YTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLE 98 (357)
T ss_dssp SCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTT
T ss_pred CceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCC
Confidence 344555566655444 44544 89999999988876544 3489999999999998 6999999999999999999
Q ss_pred CCe-EEEEEecCCCCEEEEEE------cCCCCEEEEEECCCeEEEEECCCCc-eeEEeecCCC----CeeEEE----EcC
Q psy14440 491 LWR-CLVVYKGHGHPVWDIKF------SPHGYYFASAGHDRMARLWATDSYH-PLRLFVGHYS----DVDCVQ----FHP 554 (711)
Q Consensus 491 t~~-~~~~~~~h~~~V~~v~~------sp~g~~l~sgs~Dg~i~lwd~~~~~-~~~~~~~h~~----~V~~v~----~sp 554 (711)
+++ .+..+.+|...|.+++| ++++++|++++.||.|++||++++. .+..+..|.+ .+.+++ |++
T Consensus 99 ~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 178 (357)
T 3i2n_A 99 APEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQ 178 (357)
T ss_dssp SCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-
T ss_pred CCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCC
Confidence 888 88899999999999965 6789999999999999999999886 7777766555 789998 678
Q ss_pred CCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEec---CCCEEEEEeCCCcEEEEECCCCeEEEEe-----eC
Q psy14440 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSV---CGRFLASAGGDGNVHMWDLSNGHLLTLL-----TG 626 (711)
Q Consensus 555 ~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~sp---dg~~Lasgs~Dg~I~iwDl~sg~~i~~l-----~~ 626 (711)
++++|++|+.||.|++||+++++.... ..|...|.+++|+| ++.+|++|+.||.|++||+++++.+..+ .+
T Consensus 179 ~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 257 (357)
T 3i2n_A 179 EERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKA 257 (357)
T ss_dssp CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEEC
T ss_pred CCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCC
Confidence 999999999999999999999987544 56899999999999 9999999999999999999887654443 48
Q ss_pred CCCCEEEEEEeCCCC-EEEEEeCCCcEEEEeCCCCCCccCccccccccccccccccccceeeecccCCcceEEEEEccCC
Q psy14440 627 HTDVVRALCFSRDGN-ILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRN 705 (711)
Q Consensus 627 h~~~V~sl~fspdg~-~Lasgs~Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n 705 (711)
|...|++++|++++. +|++|+.||.|++||+............. ...........+..+..|..+|.+++|++++
T Consensus 258 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 333 (357)
T 3i2n_A 258 HKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEG----IEMGVAGSVSLLQNVTLSTQPISSLDWSPDK 333 (357)
T ss_dssp CSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTS----CCCCCCCEEEEEEEEECCSSCEEEEEECSSS
T ss_pred CcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCC----CccccccccceeeccccCCCCeeEEEEcCCC
Confidence 999999999999998 89999999999999998654332111000 0001112345677899999999999999998
Q ss_pred eeee
Q psy14440 706 ILLR 709 (711)
Q Consensus 706 ~lla 709 (711)
.+|+
T Consensus 334 ~~l~ 337 (357)
T 3i2n_A 334 RGLC 337 (357)
T ss_dssp TTEE
T ss_pred CeEE
Confidence 8764
No 98
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.7e-32 Score=295.08 Aligned_cols=255 Identities=16% Similarity=0.250 Sum_probs=227.6
Q ss_pred cccccccCCcEEEEEecCCCeeEEEeec-ccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEE
Q psy14440 431 QDIEMECDDILVRIMDERNAETTRTLVG-HEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIK 509 (711)
Q Consensus 431 ~~l~~~~~d~~i~i~d~~~~~~~~~l~~-h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~ 509 (711)
..++.++.++.|++|+..+++....+.. |.+.|++++|++++++|++|+.||.|++||+.+++.+..+.+|...|.+++
T Consensus 104 ~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 183 (401)
T 4aez_A 104 LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLS 183 (401)
T ss_dssp TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEE
T ss_pred CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEE
Confidence 3466777899999999999988877776 899999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCEEEEEECCCeEEEEECC-CCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCC
Q psy14440 510 FSPHGYYFASAGHDRMARLWATD-SYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAP 588 (711)
Q Consensus 510 ~sp~g~~l~sgs~Dg~i~lwd~~-~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~ 588 (711)
| ++++|++|+.||.|++||++ ....+..+.+|...|.+++|+|++++|++|+.||.|++||+++++.+..+.+|...
T Consensus 184 ~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~ 261 (401)
T 4aez_A 184 W--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAA 261 (401)
T ss_dssp E--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSC
T ss_pred E--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcce
Confidence 9 46799999999999999999 56778889999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEecCCC-EEEEEe--CCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEe--CCCcEEEEeCCCCCCc
Q psy14440 589 VYALSFSVCGR-FLASAG--GDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSG--QDCSVKLWDFAKLSDE 663 (711)
Q Consensus 589 I~~la~spdg~-~Lasgs--~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs--~Dg~V~iWdl~~~~~~ 663 (711)
|.+++|+|++. ++++|+ .||.|++||+.+++.+..+. |...|.+++|++++++|++++ .||.|++||+....
T Consensus 262 v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~-- 338 (401)
T 4aez_A 262 VKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSG-- 338 (401)
T ss_dssp CCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTE--
T ss_pred EEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCcc--
Confidence 99999999764 566654 69999999999999998886 567899999999999999954 89999999986421
Q ss_pred cCccccccccccccccccccceeeecccCCcceEEEEEccCCeeee
Q psy14440 664 VGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
...+..+..|...|.+++|++++.+|+
T Consensus 339 -------------------~~~~~~~~~h~~~v~~~~~s~dg~~l~ 365 (401)
T 4aez_A 339 -------------------LTKQVDIPAHDTRVLYSALSPDGRILS 365 (401)
T ss_dssp -------------------EEEEEEEECCSSCCCEEEECTTSSEEE
T ss_pred -------------------ceeEEEecCCCCCEEEEEECCCCCEEE
Confidence 122334667889999999999999887
No 99
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=3.6e-32 Score=294.75 Aligned_cols=262 Identities=15% Similarity=0.154 Sum_probs=220.0
Q ss_pred ceeeeccCccc-cccccccCCcEEEEEecCCCeeEEEee--cccCCEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCeEE
Q psy14440 420 KLKAMKSSDQL-QDIEMECDDILVRIMDERNAETTRTLV--GHEGPVRKLSFSP-DRSLLLSCSQDNTIRLWSLLLWRCL 495 (711)
Q Consensus 420 ~~~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~l~--~h~~~V~~l~fsp-dg~~L~s~s~Dg~V~iwdl~t~~~~ 495 (711)
.+..+.++.+. ..++.++.++.|++||..+++....+. +|.+.|++++|++ ++++|++++.|++|++||+.+ ..+
T Consensus 75 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~ 153 (383)
T 3ei3_B 75 RVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVI 153 (383)
T ss_dssp CEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEE
T ss_pred CEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-Cce
Confidence 34445555555 678888999999999999887777665 6999999999999 789999999999999999986 555
Q ss_pred EEEecC---CCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEeecCCCCeeEEEEcCCCC-EEEEEEcCCcEEEE
Q psy14440 496 VVYKGH---GHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN-YVATGSSDRTIRLW 571 (711)
Q Consensus 496 ~~~~~h---~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~-~latgs~Dg~I~iw 571 (711)
..+..+ ...|.+++|++++.+|++|+.|+.|++||+ +++.+..+.+|...|.+++|+|++. +|++|+.|++|++|
T Consensus 154 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw 232 (383)
T 3ei3_B 154 QVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLW 232 (383)
T ss_dssp EEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEE
T ss_pred EEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEE
Confidence 566544 478999999999999999999999999999 5778889999999999999999998 99999999999999
Q ss_pred ECCC----CcEEEEeeCCCCCeEEEEEec-CCCEEEEEeCCCcEEEEECCCCeEEEEeeCCC-----------------C
Q psy14440 572 DCVT----GSHVRLLTGHKAPVYALSFSV-CGRFLASAGGDGNVHMWDLSNGHLLTLLTGHT-----------------D 629 (711)
Q Consensus 572 D~~~----~~~v~~~~~h~~~I~~la~sp-dg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~-----------------~ 629 (711)
|+++ +.++..+ +|...|++++|+| +|++|++++.||.|++||+++++.+..+.+|. +
T Consensus 233 d~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 311 (383)
T 3ei3_B 233 DLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMY 311 (383)
T ss_dssp EGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSS
T ss_pred eCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCC
Confidence 9998 6677776 6999999999999 99999999999999999999987766666543 2
Q ss_pred CEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCCccCccccccccccccccccccceeeeccc--CCcceEEEEEccCCee
Q psy14440 630 VVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKT--KASPLLHLIFSRRNIL 707 (711)
Q Consensus 630 ~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t--~~~pV~~v~Fs~~n~l 707 (711)
.+..++|+++|++ +|+.||+|+|||+.+.. ++..+.. +...+..++|++++.+
T Consensus 312 ~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~-----------------------~~~~l~~~~~~~~~~~~~~s~~g~~ 366 (383)
T 3ei3_B 312 DLIVAGRYPDDQL--LLNDKRTIDIYDANSGG-----------------------LVHQLRDPNAAGIISLNKFSPTGDV 366 (383)
T ss_dssp SEEEEECBCCTTT--CTTCCCCEEEEETTTCC-----------------------EEEEECBTTBCSCCCEEEECTTSSE
T ss_pred CceEEEecCCccc--ccCCCCeEEEEecCCCc-----------------------eeeeecCCCCCceEEEEEEecCccE
Confidence 3445666777766 77899999999987522 2344444 4567777899999999
Q ss_pred ee
Q psy14440 708 LR 709 (711)
Q Consensus 708 la 709 (711)
||
T Consensus 367 l~ 368 (383)
T 3ei3_B 367 LA 368 (383)
T ss_dssp EE
T ss_pred EE
Confidence 88
No 100
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-32 Score=304.55 Aligned_cols=289 Identities=11% Similarity=0.164 Sum_probs=222.9
Q ss_pred CceeeeccCc-cccccccccCCcEEEEEecCC---Ce---eEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECC-
Q psy14440 419 QKLKAMKSSD-QLQDIEMECDDILVRIMDERN---AE---TTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL- 490 (711)
Q Consensus 419 ~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~---~~---~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~- 490 (711)
..+..+.++. +...++.++.|+.|++||..+ +. ....+ +|.+.|++++|++++++|++|+.||+|++||+.
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~ 142 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNH 142 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEE
T ss_pred CceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEecc
Confidence 4455666677 777899999999999999765 32 22232 599999999999999999999999999999994
Q ss_pred --CCeEEEEEec------------CCCCEEEEE--EcCCCCEEEEEECCCeEEEEECCCCceeEEeec--CCCCeeEEEE
Q psy14440 491 --LWRCLVVYKG------------HGHPVWDIK--FSPHGYYFASAGHDRMARLWATDSYHPLRLFVG--HYSDVDCVQF 552 (711)
Q Consensus 491 --t~~~~~~~~~------------h~~~V~~v~--~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~--h~~~V~~v~~ 552 (711)
+++......+ +...+.++. +++++.+|++|+.||+|++||+++++.+..+.+ |...|.+++|
T Consensus 143 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~ 222 (437)
T 3gre_A 143 YQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICI 222 (437)
T ss_dssp EEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEE
T ss_pred ccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEE
Confidence 5544444332 445566666 567899999999999999999999999999988 8999999999
Q ss_pred cCCCCEEEEEEcCCcEEEEECCCCcEEEEee-CCCCCeEEEEEe----cCCCEEEEEeCCCcEEEEECCCCeEEEEeeCC
Q psy14440 553 HPNSNYVATGSSDRTIRLWDCVTGSHVRLLT-GHKAPVYALSFS----VCGRFLASAGGDGNVHMWDLSNGHLLTLLTGH 627 (711)
Q Consensus 553 sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~-~h~~~I~~la~s----pdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h 627 (711)
+|++++|++|+.||+|++||+++++++..+. .|...|++++|+ +++.+|++|+.||.|++||+.+++.+..+.+|
T Consensus 223 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 302 (437)
T 3gre_A 223 DEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINS 302 (437)
T ss_dssp CTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESS
T ss_pred CCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcC
Confidence 9999999999999999999999999999886 788899999665 46889999999999999999999998888754
Q ss_pred --------------------------CCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCCccCccccc---ccccccc-
Q psy14440 628 --------------------------TDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVN---LSHSADI- 677 (711)
Q Consensus 628 --------------------------~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~~---~~~~~~~- 677 (711)
...|++++|+ ++++|++|+.||+|++||+.+........... .......
T Consensus 303 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (437)
T 3gre_A 303 DEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQV 381 (437)
T ss_dssp SSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEE
T ss_pred CCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEe
Confidence 4458889999 78999999999999999998755432111100 0000000
Q ss_pred ----------ccccccceeeecccCCcceEEEEEccC--Ceeee
Q psy14440 678 ----------KNSSLAYLVRSYKTKASPLLHLIFSRR--NILLR 709 (711)
Q Consensus 678 ----------~~~~~~~~l~~~~t~~~pV~~v~Fs~~--n~lla 709 (711)
........+..+..|...|.+|+|+++ +.+|+
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~ 425 (437)
T 3gre_A 382 TANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLV 425 (437)
T ss_dssp ETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEE
T ss_pred ecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEE
Confidence 000111222335558999999999998 76776
No 101
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.3e-31 Score=296.13 Aligned_cols=269 Identities=19% Similarity=0.319 Sum_probs=233.4
Q ss_pred EEEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceee-----------eccC--ccccccccccCCcEEEEE
Q psy14440 379 ACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKA-----------MKSS--DQLQDIEMECDDILVRIM 445 (711)
Q Consensus 379 ~~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~-----------~~~~--~~~~~l~~~~~d~~i~i~ 445 (711)
+..++.+|.+.|++++|++++ +|++|+.||+|++||+.+.+... +... .+...++.++.++.+++|
T Consensus 154 ~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vw 232 (464)
T 3v7d_B 154 FLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVW 232 (464)
T ss_dssp EEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEE
T ss_pred EEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEe
Confidence 456778999999999999988 99999999999999998764322 2222 344668888899999999
Q ss_pred ecCCCe-----------------------eEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCC
Q psy14440 446 DERNAE-----------------------TTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHG 502 (711)
Q Consensus 446 d~~~~~-----------------------~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~ 502 (711)
|..+.. ....+.+|...|.++ ++++++|++|+.||+|++||+.+++++..+.+|.
T Consensus 233 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~ 310 (464)
T 3v7d_B 233 KLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHT 310 (464)
T ss_dssp ECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred eCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC
Confidence 987665 256788999999988 4678999999999999999999999999999999
Q ss_pred CCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEe
Q psy14440 503 HPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLL 582 (711)
Q Consensus 503 ~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~ 582 (711)
..|++++|++++.++++|+.||+|++||+++++.+..+.+|...|.+++|+ +++|++|+.||+|++||+.++.....+
T Consensus 311 ~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~ 388 (464)
T 3v7d_B 311 DRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSY 388 (464)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeee
Confidence 999999999999999999999999999999999999999999999999997 689999999999999999998876665
Q ss_pred eCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEE-eeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEE
Q psy14440 583 TGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTL-LTGHTDVVRALCFSRDGNILASSGQDCSVKLW 655 (711)
Q Consensus 583 ~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~-l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iW 655 (711)
. |...+..++|++++++|++|+ ||.|++||+.+++.+.. +..|.+.|++++|+ ++.++++++.||.+.+|
T Consensus 389 ~-~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 389 H-HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLE 459 (464)
T ss_dssp E-CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEE
T ss_pred c-CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEE
Confidence 4 677788899999999999998 89999999999999886 67788999999998 44555666667765544
No 102
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=7.5e-32 Score=298.45 Aligned_cols=240 Identities=31% Similarity=0.559 Sum_probs=215.9
Q ss_pred EEEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeec
Q psy14440 379 ACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVG 458 (711)
Q Consensus 379 ~~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~ 458 (711)
+..++.+|.+.|+|++| ++++|++|+.||.|++||+.+ ++....+.+
T Consensus 165 ~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~-------------------------------~~~~~~~~~ 211 (435)
T 1p22_A 165 CKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNT-------------------------------GEMLNTLIH 211 (435)
T ss_dssp EEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSS-------------------------------CCEEEEECC
T ss_pred EEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCC-------------------------------CcEEEEEcC
Confidence 45678899999999999 789999999999999999853 345667788
Q ss_pred ccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEE---EEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Q psy14440 459 HEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCL---VVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYH 535 (711)
Q Consensus 459 h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~---~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~ 535 (711)
|.+.|.+++|+ +..|++|+.||+|++||+.++... ..+.+|...|.+++| +++++++|+.||+|++||+++++
T Consensus 212 h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~ 287 (435)
T 1p22_A 212 HCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCE 287 (435)
T ss_dssp CCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCC
T ss_pred CCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCc
Confidence 99999999996 459999999999999999877654 677899999999999 68899999999999999999999
Q ss_pred eeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy14440 536 PLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615 (711)
Q Consensus 536 ~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl 615 (711)
.+..+.+|...|.+++|+ ++++++|+.||+|++||+++++++..+.+|...|.+++| ++++|++|+.||.|++||+
T Consensus 288 ~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~ 363 (435)
T 1p22_A 288 FVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDL 363 (435)
T ss_dssp EEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEH
T ss_pred EEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEEC
Confidence 999999999999999994 789999999999999999999999999999999999999 7899999999999999999
Q ss_pred CCCe---------EEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCC
Q psy14440 616 SNGH---------LLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLS 661 (711)
Q Consensus 616 ~sg~---------~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~ 661 (711)
.+++ .+..+.+|.+.|.+++| ++++|++|+.||+|++||+....
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~ 416 (435)
T 1p22_A 364 VAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDP 416 (435)
T ss_dssp HHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-----
T ss_pred CCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCC
Confidence 7766 88999999999999999 78899999999999999998643
No 103
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.8e-31 Score=281.49 Aligned_cols=256 Identities=19% Similarity=0.303 Sum_probs=213.6
Q ss_pred EEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCC----eEEEEEecCCCCEEEEEEcC--CCCEEEEEECCCeEE
Q psy14440 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLW----RCLVVYKGHGHPVWDIKFSP--HGYYFASAGHDRMAR 527 (711)
Q Consensus 454 ~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~----~~~~~~~~h~~~V~~v~~sp--~g~~l~sgs~Dg~i~ 527 (711)
..+.+|.+.|++++|++++++|++|+.||+|++||+.++ +....+.+|...|++++|++ ++.+|++|+.||+|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 356799999999999999999999999999999999876 57778899999999999999 599999999999999
Q ss_pred EEECCCC---------ceeEEeecCCCCeeEEEEcCC--CCEEEEEEcCCcEEEEECCCCcEEEEee-------------
Q psy14440 528 LWATDSY---------HPLRLFVGHYSDVDCVQFHPN--SNYVATGSSDRTIRLWDCVTGSHVRLLT------------- 583 (711)
Q Consensus 528 lwd~~~~---------~~~~~~~~h~~~V~~v~~sp~--~~~latgs~Dg~I~iwD~~~~~~v~~~~------------- 583 (711)
+||++++ +.+..+.+|...|.+++|+|+ +++|++|+.||+|++||+++++.+..+.
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 9999887 557788899999999999999 9999999999999999999887654432
Q ss_pred CCCCCeEEEEEecC---CCEEEEEeCCCcEEEEECCCCeE--EEEeeCCCCCEEEEEEeCCC----CEEEEEeCCCcEEE
Q psy14440 584 GHKAPVYALSFSVC---GRFLASAGGDGNVHMWDLSNGHL--LTLLTGHTDVVRALCFSRDG----NILASSGQDCSVKL 654 (711)
Q Consensus 584 ~h~~~I~~la~spd---g~~Lasgs~Dg~I~iwDl~sg~~--i~~l~~h~~~V~sl~fspdg----~~Lasgs~Dg~V~i 654 (711)
+|...+.+++|+|+ +.+|++++.|+.+.+|+...++. +..+.+|.+.|++++|++++ ++|++|+.||+|++
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~i 244 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRI 244 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEE
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEE
Confidence 68889999999997 99999999999999998888775 77788999999999999998 89999999999999
Q ss_pred EeCCCCCCccCccccccc-----------------------cccccccccccceeeecccCCcceEEEEEccCCeeee
Q psy14440 655 WDFAKLSDEVGTEEVNLS-----------------------HSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 655 Wdl~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
||+............... .............+..+..|..+|.+++|++++.+||
T Consensus 245 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 322 (351)
T 3f3f_A 245 FKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILS 322 (351)
T ss_dssp EEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEE
T ss_pred EeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEE
Confidence 999864322211100000 0000111223456778899999999999999999887
No 104
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=3.7e-32 Score=297.32 Aligned_cols=253 Identities=16% Similarity=0.250 Sum_probs=218.4
Q ss_pred EEecCCCceEEEEECC-CCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeeccc
Q psy14440 382 TLLNARQQVTCAEISE-DVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHE 460 (711)
Q Consensus 382 tl~~h~~~V~~l~fs~-dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~ 460 (711)
++.+|.+.|++++|++ ++++||+|+.||.|+||++.+..... ...+....+.+|.
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~------------------------~~~~~~~~~~~h~ 131 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVL------------------------PLREPVITLEGHT 131 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSS------------------------CBCSCSEEEECCS
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcc------------------------ccCCceEEecCCC
Confidence 4678999999999999 99999999999999999997543211 1113456788999
Q ss_pred CCEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCeEEEEE--ecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCcee
Q psy14440 461 GPVRKLSFSPDR-SLLLSCSQDNTIRLWSLLLWRCLVVY--KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPL 537 (711)
Q Consensus 461 ~~V~~l~fspdg-~~L~s~s~Dg~V~iwdl~t~~~~~~~--~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~ 537 (711)
+.|++++|++++ .+|++|+.||+|++||+.+++.+..+ .+|...|.+++|++++.+|++++.||.|++||+++++.+
T Consensus 132 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 211 (402)
T 2aq5_A 132 KRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVV 211 (402)
T ss_dssp SCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEE
T ss_pred CeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCcee
Confidence 999999999998 69999999999999999999999999 889999999999999999999999999999999999999
Q ss_pred EEe-ecCCCC-eeEEEEcCCCCEEEEE---EcCCcEEEEECCCCcE-EEEee-CCCCCeEEEEEecCCCEEEE-EeCCCc
Q psy14440 538 RLF-VGHYSD-VDCVQFHPNSNYVATG---SSDRTIRLWDCVTGSH-VRLLT-GHKAPVYALSFSVCGRFLAS-AGGDGN 609 (711)
Q Consensus 538 ~~~-~~h~~~-V~~v~~sp~~~~latg---s~Dg~I~iwD~~~~~~-v~~~~-~h~~~I~~la~spdg~~Las-gs~Dg~ 609 (711)
..+ .+|.+. +.+++|++++++|++| +.|+.|++||+++++. +.... .|...+.+++|+++|++|++ |+.||.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~ 291 (402)
T 2aq5_A 212 AEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSS 291 (402)
T ss_dssp EEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSC
T ss_pred eeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCe
Confidence 888 688776 8999999999999999 7899999999998764 33333 57788999999999999975 557999
Q ss_pred EEEEECCCCeE-EEEeeC--CCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q psy14440 610 VHMWDLSNGHL-LTLLTG--HTDVVRALCFSRDGNILASSGQDCSVKLWDFAKL 660 (711)
Q Consensus 610 I~iwDl~sg~~-i~~l~~--h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~ 660 (711)
|++||+.+++. +..+.. |.+.|.+++|++++.++++ .|+.+++|++...
T Consensus 292 i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~ 343 (402)
T 2aq5_A 292 IRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHER 343 (402)
T ss_dssp EEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETT
T ss_pred EEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCC
Confidence 99999998873 444443 5589999999999998874 5779999999763
No 105
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.6e-30 Score=275.32 Aligned_cols=275 Identities=26% Similarity=0.365 Sum_probs=230.9
Q ss_pred CceeeeccCcc-ccccccccCCcEEEEEecCCC-----eeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q psy14440 419 QKLKAMKSSDQ-LQDIEMECDDILVRIMDERNA-----ETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLW 492 (711)
Q Consensus 419 ~~~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~-----~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~ 492 (711)
+.+..+.++++ ...++.++.|+.|++||..+. ...+.+.+|.+.|.+++|++++++|++|+.|+.|++|+....
T Consensus 39 ~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~ 118 (340)
T 4aow_A 39 GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTG 118 (340)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeeccc
Confidence 34555666655 456888999999999997653 356788999999999999999999999999999999999999
Q ss_pred eEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCcee-EEeecCCCCeeEEEEcCCC--CEEEEEEcCCcEE
Q psy14440 493 RCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPL-RLFVGHYSDVDCVQFHPNS--NYVATGSSDRTIR 569 (711)
Q Consensus 493 ~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~-~~~~~h~~~V~~v~~sp~~--~~latgs~Dg~I~ 569 (711)
........+...+..+.+++++.+|++|+.|+.+++||....... ....+|...+.+++|++++ .++++++.|++|+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~ 198 (340)
T 4aow_A 119 TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVK 198 (340)
T ss_dssp EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEE
T ss_pred ceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEE
Confidence 999999999999999999999999999999999999999866443 3456789999999998864 5789999999999
Q ss_pred EEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCC
Q psy14440 570 LWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQD 649 (711)
Q Consensus 570 iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~D 649 (711)
+||+++++.+..+.+|.+.|++++|+|+|++|++|+.||.|++||+++++.+..+..+ ..|.+++|++++.++ +++.|
T Consensus 199 i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~~-~~~~d 276 (340)
T 4aow_A 199 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSPNRYWL-CAATG 276 (340)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEEECSSSSEE-EEEET
T ss_pred EEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeeecCCCCcee-eccCC
Confidence 9999999999999999999999999999999999999999999999999999988865 579999999987655 55679
Q ss_pred CcEEEEeCCCCCCccCccccccccccccccccccceeeecccCCcceEEEEEccCCeeee
Q psy14440 650 CSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 650 g~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
+.|+|||+........ ............+...|.+|+|++++.+|+
T Consensus 277 ~~i~iwd~~~~~~~~~--------------~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~ 322 (340)
T 4aow_A 277 PSIKIWDLEGKIIVDE--------------LKQEVISTSSKAEPPQCTSLAWSADGQTLF 322 (340)
T ss_dssp TEEEEEETTTTEEEEE--------------ECCC-------CCCCCEEEEEECTTSSEEE
T ss_pred CEEEEEECCCCeEEEe--------------ccccceeeeccCCCCCEEEEEECCCCCEEE
Confidence 9999999875322110 011222234567888999999999999888
No 106
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=8.3e-31 Score=282.76 Aligned_cols=237 Identities=14% Similarity=0.183 Sum_probs=192.9
Q ss_pred EEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeeccc
Q psy14440 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHE 460 (711)
Q Consensus 381 ~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~ 460 (711)
.++..|.+.|+|++|++||++||+|+.+| ++||++.+.. ..... +.
T Consensus 13 ~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~-------------------------------~~~~~--~~ 58 (355)
T 3vu4_A 13 VPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVA-------------------------------HIMSQ--EM 58 (355)
T ss_dssp ------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEE-------------------------------EEEEE--EC
T ss_pred cccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcc-------------------------------eeeee--ec
Confidence 34578999999999999999999998876 7899975322 11111 12
Q ss_pred CCEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCC-ceeE
Q psy14440 461 GPVRKLSFSPDRSLL-LSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSY-HPLR 538 (711)
Q Consensus 461 ~~V~~l~fspdg~~L-~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~-~~~~ 538 (711)
..+..+++.++++.+ ++++.|++|++||+.+++++..+. |...|.+++|++++ ++++ .|+.|++||+.+. +.+.
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~ 134 (355)
T 3vu4_A 59 RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRIT 134 (355)
T ss_dssp SCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSS
T ss_pred CCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeE
Confidence 247778888888877 567788999999999999999887 67799999998764 4444 4789999999988 6666
Q ss_pred EeecCCCCeeEEEEcCCCCEEEE--EEcCCcEEEEECCCCc----------------EEEEeeCCCCCeEEEEEecCCCE
Q psy14440 539 LFVGHYSDVDCVQFHPNSNYVAT--GSSDRTIRLWDCVTGS----------------HVRLLTGHKAPVYALSFSVCGRF 600 (711)
Q Consensus 539 ~~~~h~~~V~~v~~sp~~~~lat--gs~Dg~I~iwD~~~~~----------------~v~~~~~h~~~I~~la~spdg~~ 600 (711)
.+.. ....+++++ .++++ |+.||+|++||+.+++ ++..+.+|.+.|++++|+|+|++
T Consensus 135 ~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~ 209 (355)
T 3vu4_A 135 DDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDM 209 (355)
T ss_dssp CCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSE
T ss_pred Eecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCE
Confidence 6554 455666776 67776 5789999999999876 27888999999999999999999
Q ss_pred EEEEeCCCc-EEEEECCCCeEEEEee-C-CCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q psy14440 601 LASAGGDGN-VHMWDLSNGHLLTLLT-G-HTDVVRALCFSRDGNILASSGQDCSVKLWDFAKL 660 (711)
Q Consensus 601 Lasgs~Dg~-I~iwDl~sg~~i~~l~-~-h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~ 660 (711)
|++|+.||+ |+|||+++++.+..+. + |.+.|++++|+|+|++|++|+.||+|+|||+...
T Consensus 210 l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 210 VATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred EEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 999999998 9999999999999998 6 9999999999999999999999999999999864
No 107
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.4e-32 Score=302.74 Aligned_cols=252 Identities=14% Similarity=0.165 Sum_probs=207.0
Q ss_pred eEEEEEecCCCceEEEEECC-CCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEe
Q psy14440 378 IACYTLLNARQQVTCAEISE-DVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTL 456 (711)
Q Consensus 378 ~~~~tl~~h~~~V~~l~fs~-dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l 456 (711)
.+..++.+|.+.|+|++|+| ++++|++|+.||+|+|||+.+..+..+ ...
T Consensus 155 ~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~-----------------------------~~~ 205 (435)
T 4e54_B 155 PTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVF-----------------------------ASS 205 (435)
T ss_dssp CEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEE-----------------------------ECC
T ss_pred eeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEE-----------------------------ecc
Confidence 34556778999999999997 789999999999999999865332211 111
Q ss_pred ecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCC-EEEEEECCCeEEEEECCCCc
Q psy14440 457 VGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGY-YFASAGHDRMARLWATDSYH 535 (711)
Q Consensus 457 ~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~-~l~sgs~Dg~i~lwd~~~~~ 535 (711)
..+...+.+++|++++++|++|+.||+|++||+. ++.+..+.+|...|++++|+|++. +|++|+.|++|++||+++.+
T Consensus 206 ~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~ 284 (435)
T 4e54_B 206 DTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVR 284 (435)
T ss_dssp SSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCC
T ss_pred CCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEeccccc
Confidence 2344567899999999999999999999999986 456677889999999999999875 78899999999999998765
Q ss_pred eeEE---eecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCC------CeEEEEEecCCCEEEEEe-
Q psy14440 536 PLRL---FVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKA------PVYALSFSVCGRFLASAG- 605 (711)
Q Consensus 536 ~~~~---~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~------~I~~la~spdg~~Lasgs- 605 (711)
.... ..+|...|.+++|+|++++|++|+.||+|+|||+.++.+...+..|.. .+...+|++++.++++++
T Consensus 285 ~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (435)
T 4e54_B 285 GKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRY 364 (435)
T ss_dssp SSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECC
T ss_pred ccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEc
Confidence 4433 357999999999999999999999999999999999998888776643 234567788877777764
Q ss_pred -----------CCCcEEEEECCCCeEEEEee-CCCCCEEEE-EEeCCCCEEEEEeCCCcEEEEeCCCC
Q psy14440 606 -----------GDGNVHMWDLSNGHLLTLLT-GHTDVVRAL-CFSRDGNILASSGQDCSVKLWDFAKL 660 (711)
Q Consensus 606 -----------~Dg~I~iwDl~sg~~i~~l~-~h~~~V~sl-~fspdg~~Lasgs~Dg~V~iWdl~~~ 660 (711)
.++.|++||..+|+.+..+. +|...|.++ +|+|+|++|++|+ |++|+|||+...
T Consensus 365 ~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~g 431 (435)
T 4e54_B 365 PDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEA 431 (435)
T ss_dssp CCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC--
T ss_pred CCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcC
Confidence 23579999999999988875 677888887 6999999999876 889999999764
No 108
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.98 E-value=5.4e-31 Score=285.65 Aligned_cols=270 Identities=23% Similarity=0.338 Sum_probs=224.5
Q ss_pred CcEEEEEecCCCeeEEEeecccCCEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCeEEEEEe-------------cCCCC
Q psy14440 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSP-DRSLLLSCSQDNTIRLWSLLLWRCLVVYK-------------GHGHP 504 (711)
Q Consensus 439 d~~i~i~d~~~~~~~~~l~~h~~~V~~l~fsp-dg~~L~s~s~Dg~V~iwdl~t~~~~~~~~-------------~h~~~ 504 (711)
+..+++|+....+....+.+|.+.|++++|+| ++++|++|+.||+|++||+.++.....+. +|...
T Consensus 22 ~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (408)
T 4a11_B 22 ESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYS 101 (408)
T ss_dssp HHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSC
T ss_pred cCcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCc
Confidence 33455666666777788899999999999999 99999999999999999998776544443 59999
Q ss_pred EEEEEEcC-CCCEEEEEECCCeEEEEECCCCceeEEeecCCCCeeEEEEcCC---CCEEEEEEcCCcEEEEECCCCcEEE
Q psy14440 505 VWDIKFSP-HGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPN---SNYVATGSSDRTIRLWDCVTGSHVR 580 (711)
Q Consensus 505 V~~v~~sp-~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~---~~~latgs~Dg~I~iwD~~~~~~v~ 580 (711)
|.+++|++ ++.+|++++.||.|++||+++++.+..+. +...+.++.|++. +.++++|+.||.|++||+++++.+.
T Consensus 102 v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 180 (408)
T 4a11_B 102 VETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSH 180 (408)
T ss_dssp EEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCE
T ss_pred EEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceee
Confidence 99999999 77899999999999999999998888776 7788999999984 4599999999999999999999999
Q ss_pred EeeCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCCCe-EEEEe---------------eCCCCCEEEEEEeCCCCEE
Q psy14440 581 LLTGHKAPVYALSFSVCGR-FLASAGGDGNVHMWDLSNGH-LLTLL---------------TGHTDVVRALCFSRDGNIL 643 (711)
Q Consensus 581 ~~~~h~~~I~~la~spdg~-~Lasgs~Dg~I~iwDl~sg~-~i~~l---------------~~h~~~V~sl~fspdg~~L 643 (711)
.+.+|...|++++|+|+++ +|++|+.||.|++||++++. .+..+ .+|.+.|.+++|+++|++|
T Consensus 181 ~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 260 (408)
T 4a11_B 181 ILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHL 260 (408)
T ss_dssp EECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEE
T ss_pred eecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEE
Confidence 9999999999999999998 58999999999999998765 44444 5788999999999999999
Q ss_pred EEEeCCCcEEEEeCCCCCCccCccccc------------------------cccccccccccccceeeecccCCcceEEE
Q psy14440 644 ASSGQDCSVKLWDFAKLSDEVGTEEVN------------------------LSHSADIKNSSLAYLVRSYKTKASPLLHL 699 (711)
Q Consensus 644 asgs~Dg~V~iWdl~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~l~~~~t~~~pV~~v 699 (711)
++|+.||.|++||+.+........... ......++.......+..+..|..+|.++
T Consensus 261 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~ 340 (408)
T 4a11_B 261 LTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCC 340 (408)
T ss_dssp EEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred EEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEE
Confidence 999999999999998765432111000 00001112223556778889999999999
Q ss_pred EEccCCeeee
Q psy14440 700 IFSRRNILLR 709 (711)
Q Consensus 700 ~Fs~~n~lla 709 (711)
+|++++.+|+
T Consensus 341 ~~s~~~~~l~ 350 (408)
T 4a11_B 341 VFQSNFQELY 350 (408)
T ss_dssp EEETTTTEEE
T ss_pred EEcCCCCEEE
Confidence 9999998887
No 109
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.98 E-value=1.3e-30 Score=276.69 Aligned_cols=241 Identities=16% Similarity=0.137 Sum_probs=214.2
Q ss_pred EEEEEecCCCceEEEEECCCCC-EEEEEeCCCeEEEEeC-CCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEe
Q psy14440 379 ACYTLLNARQQVTCAEISEDVS-ILAVGFSESYIKLWSL-VPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTL 456 (711)
Q Consensus 379 ~~~tl~~h~~~V~~l~fs~dg~-~LatG~~dg~I~vWdl-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l 456 (711)
....+.+|...|++++|+++++ +|++|+.||.|++|++ .+.+ ...+
T Consensus 48 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~--------------------------------~~~~ 95 (342)
T 1yfq_A 48 DLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPS--------------------------------FQAL 95 (342)
T ss_dssp EEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSS--------------------------------EEEC
T ss_pred cceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCc--------------------------------eEec
Confidence 3455668999999999999999 9999999999999998 6532 2455
Q ss_pred ec--ccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCC---------CeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCe
Q psy14440 457 VG--HEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLL---------WRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRM 525 (711)
Q Consensus 457 ~~--h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t---------~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~ 525 (711)
.+ |.+.|.+++|++ +++|++++.|+.|++||+.+ ++++..+. |...|.+++|++++ +++++.|+.
T Consensus 96 ~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~ 171 (342)
T 1yfq_A 96 TNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQ 171 (342)
T ss_dssp BSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTE
T ss_pred cccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCe
Confidence 67 999999999999 99999999999999999987 66666665 88999999999887 999999999
Q ss_pred EEEEECCC-Cc--eeEEeecCCCCeeEEEEcC-CCCEEEEEEcCCcEEEEECCCC------cEEEEeeCCCC--------
Q psy14440 526 ARLWATDS-YH--PLRLFVGHYSDVDCVQFHP-NSNYVATGSSDRTIRLWDCVTG------SHVRLLTGHKA-------- 587 (711)
Q Consensus 526 i~lwd~~~-~~--~~~~~~~h~~~V~~v~~sp-~~~~latgs~Dg~I~iwD~~~~------~~v~~~~~h~~-------- 587 (711)
|++||+++ +. .......|...|.+++|+| +++++++|+.||.|++||+..+ +....+.+|..
T Consensus 172 i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (342)
T 1yfq_A 172 VQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLA 251 (342)
T ss_dssp EEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSC
T ss_pred EEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccc
Confidence 99999998 54 3345557888999999999 9999999999999999999887 77888888865
Q ss_pred -CeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCC-CCCEEEEEEeCCCCEEEEEeCCCc-EEEEeC
Q psy14440 588 -PVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGH-TDVVRALCFSRDGNILASSGQDCS-VKLWDF 657 (711)
Q Consensus 588 -~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h-~~~V~sl~fspdg~~Lasgs~Dg~-V~iWdl 657 (711)
.|++++|+|+|++|++|+.||.|++||+.+++.+..+.+| .+.|++++ ++|++|++|+.||+ .+.|..
T Consensus 252 ~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~~ 322 (342)
T 1yfq_A 252 YPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAAI 322 (342)
T ss_dssp CCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSSS
T ss_pred eeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCcccccccc
Confidence 9999999999999999999999999999999999999998 99999999 99999999999998 665554
No 110
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.98 E-value=8.7e-30 Score=280.68 Aligned_cols=251 Identities=17% Similarity=0.319 Sum_probs=220.6
Q ss_pred ccccccCCcEEEEEecCCCeeEEEee--cccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEE
Q psy14440 432 DIEMECDDILVRIMDERNAETTRTLV--GHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIK 509 (711)
Q Consensus 432 ~l~~~~~d~~i~i~d~~~~~~~~~l~--~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~ 509 (711)
.++++ .|+.|++||..+++....+. +|...|++|+|+++|++|++|+.||+|++||+.+++++..+.+|...+.++.
T Consensus 118 ~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s 196 (420)
T 4gga_A 118 VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLS 196 (420)
T ss_dssp EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEe
Confidence 44444 48899999999998877665 6788999999999999999999999999999999999999999999999988
Q ss_pred EcCCCCEEEEEECCCeEEEEECCCC-ceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCc----EEEEeeC
Q psy14440 510 FSPHGYYFASAGHDRMARLWATDSY-HPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGS----HVRLLTG 584 (711)
Q Consensus 510 ~sp~g~~l~sgs~Dg~i~lwd~~~~-~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~----~v~~~~~ 584 (711)
|+ +.++++|+.|+.+++||.... ..+..+.+|...+.++.|+++++++++++.|+.|++||..+++ .+.....
T Consensus 197 ~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~ 274 (420)
T 4gga_A 197 WN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQ 274 (420)
T ss_dssp EE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECC
T ss_pred eC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecc
Confidence 85 679999999999999998864 5567888999999999999999999999999999999998775 3567778
Q ss_pred CCCCeEEEEEecCCC-EEEEE--eCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEe--CCCcEEEEeCCC
Q psy14440 585 HKAPVYALSFSVCGR-FLASA--GGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSG--QDCSVKLWDFAK 659 (711)
Q Consensus 585 h~~~I~~la~spdg~-~Lasg--s~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs--~Dg~V~iWdl~~ 659 (711)
|.+.|.+++|+|++. +++++ +.|++|+|||+.+++.+..+..| ..+.++.|+++++.|++++ .||.|+|||+.+
T Consensus 275 ~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~ 353 (420)
T 4gga_A 275 HQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPT 353 (420)
T ss_dssp CSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTT
T ss_pred cCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCC
Confidence 999999999999654 55554 57999999999999999988865 4688999999999888765 799999999864
Q ss_pred CCCccCccccccccccccccccccceeeecccCCcceEEEEEccCCeeee
Q psy14440 660 LSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
..++..+.+|..+|.+|+|+++|.+||
T Consensus 354 -----------------------~~~v~~l~gH~~~V~~l~~spdg~~l~ 380 (420)
T 4gga_A 354 -----------------------MAKVAELKGHTSRVLSLTMSPDGATVA 380 (420)
T ss_dssp -----------------------CCEEEEECCCSSCEEEEEECTTSSCEE
T ss_pred -----------------------CcEEEEEcCCCCCEEEEEEcCCCCEEE
Confidence 234667889999999999999999988
No 111
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.98 E-value=1e-30 Score=289.33 Aligned_cols=248 Identities=22% Similarity=0.415 Sum_probs=214.0
Q ss_pred EEEeecccCCEEEEEEcCC-CCEEEEEeCCCeEEEEECCC----------CeEEEEEecCCCCEEEEEEcCCCC-EEEEE
Q psy14440 453 TRTLVGHEGPVRKLSFSPD-RSLLLSCSQDNTIRLWSLLL----------WRCLVVYKGHGHPVWDIKFSPHGY-YFASA 520 (711)
Q Consensus 453 ~~~l~~h~~~V~~l~fspd-g~~L~s~s~Dg~V~iwdl~t----------~~~~~~~~~h~~~V~~v~~sp~g~-~l~sg 520 (711)
.....+|.+.|++++|+++ +.+|++++.||.|++||+.+ ...+..+.+|...|++++|++++. +|++|
T Consensus 121 ~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 121 IEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred EEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence 3566789999999999997 67999999999999999986 677888999999999999999988 99999
Q ss_pred ECCCeEEEEECCCCce-------eEEeecCCCCeeEEEEcC-CCCEEEEEEcCCcEEEEECCCC---cEEEEeeCCCCCe
Q psy14440 521 GHDRMARLWATDSYHP-------LRLFVGHYSDVDCVQFHP-NSNYVATGSSDRTIRLWDCVTG---SHVRLLTGHKAPV 589 (711)
Q Consensus 521 s~Dg~i~lwd~~~~~~-------~~~~~~h~~~V~~v~~sp-~~~~latgs~Dg~I~iwD~~~~---~~v~~~~~h~~~I 589 (711)
+.||+|++|++..+.. ...+.+|...|.+++|+| ++.+|++++.||.|++||++++ +.+..+..|...|
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 280 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV 280 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe
Confidence 9999999999987422 466778999999999999 7889999999999999999987 5778888999999
Q ss_pred EEEEEecCCC-EEEEEeCCCcEEEEECCC-CeEEEEeeCCCCCEEEEEEeCCCC-EEEEEeCCCcEEEEeCCCCCCccCc
Q psy14440 590 YALSFSVCGR-FLASAGGDGNVHMWDLSN-GHLLTLLTGHTDVVRALCFSRDGN-ILASSGQDCSVKLWDFAKLSDEVGT 666 (711)
Q Consensus 590 ~~la~spdg~-~Lasgs~Dg~I~iwDl~s-g~~i~~l~~h~~~V~sl~fspdg~-~Lasgs~Dg~V~iWdl~~~~~~~~~ 666 (711)
++++|+|++. +|++|+.||.|++||+++ +..+..+.+|.+.|++++|++++. +|++|+.||+|+|||+.........
T Consensus 281 ~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 360 (430)
T 2xyi_A 281 NCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 360 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCH
T ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCc
Confidence 9999999987 688999999999999998 567888999999999999999985 7999999999999999874432211
Q ss_pred cccccccccccccccccceeeecccCCcceEEEEEccCCe-eee
Q psy14440 667 EEVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNI-LLR 709 (711)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~-lla 709 (711)
.. .......++..+.+|...|.+++|++++. +|+
T Consensus 361 ~~---------~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~ 395 (430)
T 2xyi_A 361 ED---------AEDGPPELLFIHGGHTAKISDFSWNPNEPWIIC 395 (430)
T ss_dssp HH---------HHHCCTTEEEECCCCSSCEEEEEECSSSTTEEE
T ss_pred cc---------cccCCcceEEEcCCCCCCceEEEECCCCCCEEE
Confidence 10 01123456778889999999999999987 665
No 112
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.98 E-value=1.4e-30 Score=287.29 Aligned_cols=273 Identities=15% Similarity=0.213 Sum_probs=212.0
Q ss_pred EEEEEecCC------------CceEEEEECCCC--CEEEEEeCCCeEEEEeCCCCceeeeccCcc-----------cccc
Q psy14440 379 ACYTLLNAR------------QQVTCAEISEDV--SILAVGFSESYIKLWSLVPQKLKAMKSSDQ-----------LQDI 433 (711)
Q Consensus 379 ~~~tl~~h~------------~~V~~l~fs~dg--~~LatG~~dg~I~vWdl~~~~~~~~~~~~~-----------~~~l 433 (711)
+..++.+|. +.|++++|++++ .+|++|+.||.|++|++.+........... ...+
T Consensus 73 ~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 152 (447)
T 3dw8_B 73 VYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTL 152 (447)
T ss_dssp EEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSC
T ss_pred EecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccce
Confidence 456788898 889999999998 899999999999999987644321100000 0000
Q ss_pred ccccCCcEEEEEecCCCeeEEE-eecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEE-------EecCCCC
Q psy14440 434 EMECDDILVRIMDERNAETTRT-LVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLL-WRCLVV-------YKGHGHP 504 (711)
Q Consensus 434 ~~~~~d~~i~i~d~~~~~~~~~-l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t-~~~~~~-------~~~h~~~ 504 (711)
...... -.-+.. .....+. +.+|.+.|++++|++++++|++| .||+|++||+.+ ...+.. +.+|...
T Consensus 153 ~~~~~~--~~~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 228 (447)
T 3dw8_B 153 RVPVFR--PMDLMV-EASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEV 228 (447)
T ss_dssp CCCEEE--EEEEEE-EEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCC
T ss_pred Eecccc--chheee-eccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcc
Confidence 000000 000110 1112223 36899999999999999999998 799999999984 444442 4579999
Q ss_pred EEEEEEcCCC-CEEEEEECCCeEEEEECCCCce----eEEeecCCC------------CeeEEEEcCCCCEEEEEEcCCc
Q psy14440 505 VWDIKFSPHG-YYFASAGHDRMARLWATDSYHP----LRLFVGHYS------------DVDCVQFHPNSNYVATGSSDRT 567 (711)
Q Consensus 505 V~~v~~sp~g-~~l~sgs~Dg~i~lwd~~~~~~----~~~~~~h~~------------~V~~v~~sp~~~~latgs~Dg~ 567 (711)
|++++|+|++ .+|++|+.||+|++||+++++. +..+.+|.. .|.+++|+|++++|++++. ++
T Consensus 229 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~ 307 (447)
T 3dw8_B 229 ITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LS 307 (447)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SE
T ss_pred eEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-Ce
Confidence 9999999998 9999999999999999999886 788888876 8999999999999999998 99
Q ss_pred EEEEECCC-CcEEEEeeCCCCC---------------eEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeC-----
Q psy14440 568 IRLWDCVT-GSHVRLLTGHKAP---------------VYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTG----- 626 (711)
Q Consensus 568 I~iwD~~~-~~~v~~~~~h~~~---------------I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~----- 626 (711)
|++||+++ ++.+..+.+|... +..++|+|+|++|++|+.||.|+|||+.+++.+. +.+
T Consensus 308 v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~ 386 (447)
T 3dw8_B 308 VKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENN 386 (447)
T ss_dssp EEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTC
T ss_pred EEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeeccccc
Confidence 99999997 8888888888642 3349999999999999999999999999988763 222
Q ss_pred ----------------------------CCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCC
Q psy14440 627 ----------------------------HTDVVRALCFSRDGNILASSGQDCSVKLWDFA 658 (711)
Q Consensus 627 ----------------------------h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~ 658 (711)
+...|.+++|+|+|++||+|+.++ +++|.-+
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 387 KPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp CTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred ccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeeccc
Confidence 235688999999999999998775 8888643
No 113
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=1.2e-31 Score=293.38 Aligned_cols=248 Identities=11% Similarity=0.117 Sum_probs=182.9
Q ss_pred ecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCE
Q psy14440 384 LNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPV 463 (711)
Q Consensus 384 ~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V 463 (711)
..|...+....+++++.+||+|+.|++|+||++.+..... ......+.||.+.|
T Consensus 86 ~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~--------------------------~~~~~~~~gH~~~v 139 (393)
T 4gq1_A 86 NLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIIT--------------------------QHVLGGKSGHHNFV 139 (393)
T ss_dssp C----------CCEEEEEEEEEETTSCEEEEEEETTEEEE--------------------------EEEECTTTSCSSCE
T ss_pred cccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccce--------------------------eeeecccCCCCCce
Confidence 4455566666777888899999999999999985433211 11233467999999
Q ss_pred EEEEEcC--------CCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCC-CEEEEEECCCeEEEEECCCC
Q psy14440 464 RKLSFSP--------DRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG-YYFASAGHDRMARLWATDSY 534 (711)
Q Consensus 464 ~~l~fsp--------dg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g-~~l~sgs~Dg~i~lwd~~~~ 534 (711)
++++|+| |+++|+|||.|++|+|||+.++..+..+.+|...|.+++|+|++ ++|++|+.||+|++||++++
T Consensus 140 ~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~ 219 (393)
T 4gq1_A 140 NDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLN 219 (393)
T ss_dssp EEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCC
T ss_pred EEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCC
Confidence 9999998 88999999999999999999998888888999999999999987 58999999999999999876
Q ss_pred ceeEE-------------------------eecCCCCeeEEEEc-CCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCC
Q psy14440 535 HPLRL-------------------------FVGHYSDVDCVQFH-PNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAP 588 (711)
Q Consensus 535 ~~~~~-------------------------~~~h~~~V~~v~~s-p~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~ 588 (711)
+.... ..+|...+.++.|+ ++++.|++++.|+++++||+.++.....+..|...
T Consensus 220 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~ 299 (393)
T 4gq1_A 220 LSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMK 299 (393)
T ss_dssp C----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---------------
T ss_pred cccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCc
Confidence 54322 23677889999987 79999999999999999999988877777666655
Q ss_pred eEEEEEec--------------------CCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeC
Q psy14440 589 VYALSFSV--------------------CGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQ 648 (711)
Q Consensus 589 I~~la~sp--------------------dg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~ 648 (711)
+..+.+++ ++.++++|+.||+|+|||+.+++.+..+.+|...|++++|+|||++||+++.
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~ 379 (393)
T 4gq1_A 300 LGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATE 379 (393)
T ss_dssp ----CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEES
T ss_pred cccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 55444433 3446778889999999999999998888889999999999999999999986
Q ss_pred CCcEEEEeCC
Q psy14440 649 DCSVKLWDFA 658 (711)
Q Consensus 649 Dg~V~iWdl~ 658 (711)
|| +.+|.+.
T Consensus 380 ~G-v~lvrL~ 388 (393)
T 4gq1_A 380 GS-VLLTRLM 388 (393)
T ss_dssp SE-EEEEEEG
T ss_pred CC-eEEEEEe
Confidence 65 6666654
No 114
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.4e-31 Score=280.62 Aligned_cols=256 Identities=10% Similarity=0.028 Sum_probs=206.5
Q ss_pred EECCCCCEEEEEeCCCeEEEEeCCCCceee---------eccCccccccccccCCcEEEEEecC---------CCeeEEE
Q psy14440 394 EISEDVSILAVGFSESYIKLWSLVPQKLKA---------MKSSDQLQDIEMECDDILVRIMDER---------NAETTRT 455 (711)
Q Consensus 394 ~fs~dg~~LatG~~dg~I~vWdl~~~~~~~---------~~~~~~~~~l~~~~~d~~i~i~d~~---------~~~~~~~ 455 (711)
.+..|+.+||+|+.||.|++||+.+++... +...+. ++.++.|+.+++|+.. +++.+..
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~ 119 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLRE 119 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEE
Confidence 455688999999999999999998765322 112222 7788899999999654 4443444
Q ss_pred ee-cccCCEEEEEEcC--CCCEEEEEeCCCeEEEEECCCCeEEEEEec-CCCCEEEEEEcCCCCEEEEEECCCeEEEEEC
Q psy14440 456 LV-GHEGPVRKLSFSP--DRSLLLSCSQDNTIRLWSLLLWRCLVVYKG-HGHPVWDIKFSPHGYYFASAGHDRMARLWAT 531 (711)
Q Consensus 456 l~-~h~~~V~~l~fsp--dg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~-h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~ 531 (711)
+. +|.+.|.+++|+| ++++|++|+.||+|++||+.+++++..... |...|.+++|+|+|.+|++|+.||.|++||+
T Consensus 120 ~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~ 199 (343)
T 3lrv_A 120 IEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNL 199 (343)
T ss_dssp EECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEES
T ss_pred eecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 43 7789999999999 999999999999999999999998777644 4568999999999999999999999999999
Q ss_pred CCCcee-EEeec-CCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeC---CCCCeE--EEEEecCCCEEEEE
Q psy14440 532 DSYHPL-RLFVG-HYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTG---HKAPVY--ALSFSVCGRFLASA 604 (711)
Q Consensus 532 ~~~~~~-~~~~~-h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~---h~~~I~--~la~spdg~~Lasg 604 (711)
++++.+ ..+.+ |...|.+++|+|++.+|++|+ |++|++||+++++.+..+.. |...+. +++|+|+|++|++|
T Consensus 200 ~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 278 (343)
T 3lrv_A 200 SSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAY 278 (343)
T ss_dssp SCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEE
T ss_pred CCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEe
Confidence 999887 77887 999999999999999999999 55999999999887655543 434444 69999999999999
Q ss_pred eC-CCcEEEEECCCCeEEEEeeCCCCCEEEEEEeC---CCCEEEEEeCCCcEEEEeC
Q psy14440 605 GG-DGNVHMWDLSNGHLLTLLTGHTDVVRALCFSR---DGNILASSGQDCSVKLWDF 657 (711)
Q Consensus 605 s~-Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fsp---dg~~Lasgs~Dg~V~iWdl 657 (711)
+. |+.|+||++.++...... ..+..++|++ +++.|++++.||.++++-.
T Consensus 279 s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~ 331 (343)
T 3lrv_A 279 SNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGGIAAILK 331 (343)
T ss_dssp ETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTEEEEEEE
T ss_pred cCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCceEEEEe
Confidence 98 999999999665432222 4577888888 8889999999999998854
No 115
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=7.5e-31 Score=287.11 Aligned_cols=232 Identities=18% Similarity=0.143 Sum_probs=169.9
Q ss_pred EeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEE-----EEecCCCCEEEEEEcC--------CCCEEEEEE
Q psy14440 455 TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLV-----VYKGHGHPVWDIKFSP--------HGYYFASAG 521 (711)
Q Consensus 455 ~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~-----~~~~h~~~V~~v~~sp--------~g~~l~sgs 521 (711)
....|.+.+....+++++.+|++|+.|++|+|||+.+++... .+.+|...|++++|+| ++++|++|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s 163 (393)
T 4gq1_A 84 SENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVG 163 (393)
T ss_dssp ECC----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEE
T ss_pred cccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEE
Confidence 334566666667777788899999999999999998886543 3568999999999997 789999999
Q ss_pred CCCeEEEEECCCCceeEEeecCCCCeeEEEEcCCC-CEEEEEEcCCcEEEEECCCCcEEEE-------------------
Q psy14440 522 HDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNS-NYVATGSSDRTIRLWDCVTGSHVRL------------------- 581 (711)
Q Consensus 522 ~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~-~~latgs~Dg~I~iwD~~~~~~v~~------------------- 581 (711)
.|++|+|||+.++.++..+.+|...|.+++|+|++ ++|++|+.||+|++||+++++....
T Consensus 164 ~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~ 243 (393)
T 4gq1_A 164 DDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLP 243 (393)
T ss_dssp TTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGG
T ss_pred CCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccc
Confidence 99999999999888888888999999999999987 5899999999999999998765432
Q ss_pred ------eeCCCCCeEEEEEe-cCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeC----------------
Q psy14440 582 ------LTGHKAPVYALSFS-VCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSR---------------- 638 (711)
Q Consensus 582 ------~~~h~~~I~~la~s-pdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fsp---------------- 638 (711)
..+|...+.+++|+ ++|+.|++++.|++|++||+..++....+..|...+..+.+.+
T Consensus 244 ~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (393)
T 4gq1_A 244 LVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACP 323 (393)
T ss_dssp GC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEE
T ss_pred ceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEE
Confidence 23577889999987 7999999999999999999999888777776665555544433
Q ss_pred ----CCCEEEEEeCCCcEEEEeCCCCCCccCccccccccccccccccccceeeecccCCcceEEEEEccCCeeee
Q psy14440 639 ----DGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 639 ----dg~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
++.++++|+.||+|+|||+.+.. .+..+..+..+|.+|+|++||.+||
T Consensus 324 ~~~~~~~~~~sgs~Dg~V~lwd~~~~~-----------------------~~~~~~~~~~~V~svafspdG~~LA 375 (393)
T 4gq1_A 324 HPRYMDYFATAHSQHGLIQLINTYEKD-----------------------SNSIPIQLGMPIVDFCWHQDGSHLA 375 (393)
T ss_dssp CSSCTTEEEEEETTTTEEEEEETTCTT-----------------------CCEEEEECSSCEEEEEECTTSSEEE
T ss_pred ccCCCCEEEEEECCCCEEEEEECCCCc-----------------------EEEEecCCCCcEEEEEEcCCCCEEE
Confidence 34467888899999999987532 2234556778999999999999998
No 116
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=9.1e-30 Score=283.13 Aligned_cols=247 Identities=12% Similarity=0.079 Sum_probs=209.4
Q ss_pred EecCCCceEEEEECCCCCEE-EEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEee--cc
Q psy14440 383 LLNARQQVTCAEISEDVSIL-AVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLV--GH 459 (711)
Q Consensus 383 l~~h~~~V~~l~fs~dg~~L-atG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~--~h 459 (711)
..+|.+.|++++|++++++| |+|+.||.|+||++.. .++.....+. .|
T Consensus 98 ~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~-----------------------------~~~~~~~~~~~~~~ 148 (450)
T 2vdu_B 98 APPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDK-----------------------------TSKNVLKLRKRFCF 148 (450)
T ss_dssp --CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECS-----------------------------SSSSCEEEEEEEEC
T ss_pred CCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcC-----------------------------CCCceeeeeecccC
Confidence 35788899999999999996 8999999999999851 0122233333 56
Q ss_pred cCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEE----EEecCCCCEEEEEEcCC---CCEEEEEECCCeEEEEECC
Q psy14440 460 EGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLV----VYKGHGHPVWDIKFSPH---GYYFASAGHDRMARLWATD 532 (711)
Q Consensus 460 ~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~----~~~~h~~~V~~v~~sp~---g~~l~sgs~Dg~i~lwd~~ 532 (711)
...|++++|+|++++|++|+.||.|++|++.++.... .+.+|...|++++|+|+ +.+|++|+.|++|++||+.
T Consensus 149 ~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~ 228 (450)
T 2vdu_B 149 SKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYP 228 (450)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEES
T ss_pred CCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECC
Confidence 7899999999999999999999999999998776543 67789999999999999 9999999999999999999
Q ss_pred CCceeEE-eecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeC-------------------------CC
Q psy14440 533 SYHPLRL-FVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTG-------------------------HK 586 (711)
Q Consensus 533 ~~~~~~~-~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~-------------------------h~ 586 (711)
+++.+.. +.+|...|.+++|+ ++++|++|+.|++|++||+.+++++..+.. ..
T Consensus 229 ~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (450)
T 2vdu_B 229 QCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIE 307 (450)
T ss_dssp CTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBC
T ss_pred CCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccce
Confidence 9988877 55899999999999 999999999999999999999999888763 23
Q ss_pred CCeEEEEEecCCCEEEEEe-CCCcEEEEEC--CCC---eEEEEeeCCCCCEEEEEEeCCCCEEEEEeC------CCcEEE
Q psy14440 587 APVYALSFSVCGRFLASAG-GDGNVHMWDL--SNG---HLLTLLTGHTDVVRALCFSRDGNILASSGQ------DCSVKL 654 (711)
Q Consensus 587 ~~I~~la~spdg~~Lasgs-~Dg~I~iwDl--~sg---~~i~~l~~h~~~V~sl~fspdg~~Lasgs~------Dg~V~i 654 (711)
..|.+++|++++++|++++ .|+.|+|||+ .++ +.+..+.+| +.|.+++|++++.++++++. +..|++
T Consensus 308 ~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v 386 (450)
T 2vdu_B 308 FAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKF 386 (450)
T ss_dssp CCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEE
T ss_pred EEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEE
Confidence 5799999999999999998 8999999999 666 778888888 88999999996444443333 556899
Q ss_pred EeCCCC
Q psy14440 655 WDFAKL 660 (711)
Q Consensus 655 Wdl~~~ 660 (711)
|.+...
T Consensus 387 ~~~~~~ 392 (450)
T 2vdu_B 387 IEYNLN 392 (450)
T ss_dssp EEEETT
T ss_pred EEEEcC
Confidence 988654
No 117
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=1.7e-28 Score=269.94 Aligned_cols=270 Identities=11% Similarity=0.059 Sum_probs=230.8
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceee----------------eccCccccccccccCCcEEEEEecCC
Q psy14440 386 ARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKA----------------MKSSDQLQDIEMECDDILVRIMDERN 449 (711)
Q Consensus 386 h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~----------------~~~~~~~~~l~~~~~d~~i~i~d~~~ 449 (711)
+...+.+++|++++.++++++.++.|++||+.+++... +....+...++.++.++.+++||..+
T Consensus 121 ~~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~ 200 (433)
T 3bws_A 121 TGFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKT 200 (433)
T ss_dssp CSSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTT
T ss_pred CCCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCC
Confidence 34567799999988888999999999999998765433 23344556677778899999999999
Q ss_pred CeeEEEeecccCCEEEEEEcCCCCEEEEE-eCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEE-------
Q psy14440 450 AETTRTLVGHEGPVRKLSFSPDRSLLLSC-SQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAG------- 521 (711)
Q Consensus 450 ~~~~~~l~~h~~~V~~l~fspdg~~L~s~-s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs------- 521 (711)
++....+..|...+.+++|++++++++++ +.|++|++||+.+++.+..+..+ ..+.+++|+|+|+++++++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~ 279 (433)
T 3bws_A 201 LAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQE 279 (433)
T ss_dssp CCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTC
T ss_pred ceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccc
Confidence 99999999999999999999999988554 47999999999999988887754 4599999999999999988
Q ss_pred -CCCeEEEEECCCCceeEEeecCCCCeeEEEEcCCCCEE-EEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCC
Q psy14440 522 -HDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV-ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGR 599 (711)
Q Consensus 522 -~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l-atgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~ 599 (711)
.||.|++||+.+++.+..+ .|...+.+++|+|+++++ ++++.|+.|++||+.+++.+..+. +...+.+++|+++|+
T Consensus 280 ~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~ 357 (433)
T 3bws_A 280 SGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGK 357 (433)
T ss_dssp SCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSS
T ss_pred cCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCC
Confidence 5889999999988777665 455689999999999765 556789999999999999888776 678899999999999
Q ss_pred EEEEEeC---------------CCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeC-CCcEEEEeCCC
Q psy14440 600 FLASAGG---------------DGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQ-DCSVKLWDFAK 659 (711)
Q Consensus 600 ~Lasgs~---------------Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~-Dg~V~iWdl~~ 659 (711)
+|++++. ||.|++||+.+++.+..+.. ...+.+++|+++|++|++++. |++|++|++..
T Consensus 358 ~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 358 YLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred EEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 9998876 57999999999999988886 457899999999999998875 99999999864
No 118
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=3.6e-28 Score=254.72 Aligned_cols=251 Identities=16% Similarity=0.298 Sum_probs=216.4
Q ss_pred ccccccCCcEEEEEecCCCeeEEEee--cccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEE
Q psy14440 432 DIEMECDDILVRIMDERNAETTRTLV--GHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIK 509 (711)
Q Consensus 432 ~l~~~~~d~~i~i~d~~~~~~~~~l~--~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~ 509 (711)
.++++ .|+.|++||..+++..+.+. +|...|++++|++++++|++|+.||+|++||+.+++++..+.+|...+.++.
T Consensus 38 ~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~ 116 (318)
T 4ggc_A 38 VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLS 116 (318)
T ss_dssp EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEee
Confidence 34444 58899999999999887665 6788899999999999999999999999999999999999999999988766
Q ss_pred EcCCCCEEEEEECCCeEEEEECCCC-ceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcE----EEEeeC
Q psy14440 510 FSPHGYYFASAGHDRMARLWATDSY-HPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH----VRLLTG 584 (711)
Q Consensus 510 ~sp~g~~l~sgs~Dg~i~lwd~~~~-~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~----v~~~~~ 584 (711)
+ ++..+++++.++.+++|+.... ..+..+.+|...+.++.+++++++|++++.||+|++||+++++. ......
T Consensus 117 ~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 194 (318)
T 4ggc_A 117 W--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQ 194 (318)
T ss_dssp E--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECC
T ss_pred c--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecc
Confidence 5 4679999999999999998865 45677889999999999999999999999999999999988753 455567
Q ss_pred CCCCeEEEEEecCCCEE---EEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEe--CCCcEEEEeCCC
Q psy14440 585 HKAPVYALSFSVCGRFL---ASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSG--QDCSVKLWDFAK 659 (711)
Q Consensus 585 h~~~I~~la~spdg~~L---asgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs--~Dg~V~iWdl~~ 659 (711)
|.+.|.++++++++..+ ++++.++.|++||...+....... +...+..++|++++..+++++ .||+|+|||+.+
T Consensus 195 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~ 273 (318)
T 4ggc_A 195 HQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT 273 (318)
T ss_dssp CCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT
T ss_pred cCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCC
Confidence 88999999999976533 466788999999999888776654 567799999999999887765 799999999864
Q ss_pred CCCccCccccccccccccccccccceeeecccCCcceEEEEEccCCeeee
Q psy14440 660 LSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
..++..+.+|..+|.+|+|++++.+||
T Consensus 274 -----------------------~~~~~~l~gH~~~V~~l~~spdg~~l~ 300 (318)
T 4ggc_A 274 -----------------------MAKVAELKGHTSRVLSLTMSPDGATVA 300 (318)
T ss_dssp -----------------------CCEEEEECCCSSCEEEEEECTTSSCEE
T ss_pred -----------------------CcEEEEEcCCCCCEEEEEEcCCCCEEE
Confidence 334667889999999999999999988
No 119
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=6.2e-30 Score=303.47 Aligned_cols=238 Identities=21% Similarity=0.338 Sum_probs=207.8
Q ss_pred EEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECC--CCeEEEEEecCCCCEEEEEEcCC--CCEEEEEECCCeEEEE
Q psy14440 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL--LWRCLVVYKGHGHPVWDIKFSPH--GYYFASAGHDRMARLW 529 (711)
Q Consensus 454 ~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~--t~~~~~~~~~h~~~V~~v~~sp~--g~~l~sgs~Dg~i~lw 529 (711)
..+.+|.+.|++++|++++++|++|+.||+|++||+. ++..+..+.+|...|++++|+++ +++|++|+.||+|++|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 4577999999999999999999999999999999997 66788889999999999999987 9999999999999999
Q ss_pred ECCCCc--eeEEeecCCCCeeEEEEcCC--CCEEEEEEcCCcEEEEECCCCc--EEEEeeCCCCCeEEEEEec-------
Q psy14440 530 ATDSYH--PLRLFVGHYSDVDCVQFHPN--SNYVATGSSDRTIRLWDCVTGS--HVRLLTGHKAPVYALSFSV------- 596 (711)
Q Consensus 530 d~~~~~--~~~~~~~h~~~V~~v~~sp~--~~~latgs~Dg~I~iwD~~~~~--~v~~~~~h~~~I~~la~sp------- 596 (711)
|+++++ .+..+.+|...|.+++|+|+ ++++++|+.||+|++||++++. ....+.+|...|.+++|+|
T Consensus 83 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~ 162 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (753)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-----
T ss_pred ECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccc
Confidence 999886 67788899999999999999 9999999999999999998873 4556778999999999999
Q ss_pred ------CCCEEEEEeCCCcEEEEECCCC----eEEEEeeCCCCCEEEEEEeCC---CCEEEEEeCCCcEEEEeCCCCCCc
Q psy14440 597 ------CGRFLASAGGDGNVHMWDLSNG----HLLTLLTGHTDVVRALCFSRD---GNILASSGQDCSVKLWDFAKLSDE 663 (711)
Q Consensus 597 ------dg~~Lasgs~Dg~I~iwDl~sg----~~i~~l~~h~~~V~sl~fspd---g~~Lasgs~Dg~V~iWdl~~~~~~ 663 (711)
++.+|++|+.||.|++||++++ ..+..+.+|.+.|++++|+|+ +++|++|+.||+|++||+......
T Consensus 163 ~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~ 242 (753)
T 3jro_A 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGP 242 (753)
T ss_dssp ----CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSC
T ss_pred ccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCc
Confidence 5899999999999999999887 667788999999999999999 899999999999999999864321
Q ss_pred cCccccccccccccccccccceeeecccCCcceEEEEEccCCeeee
Q psy14440 664 VGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
. ...+.....+...|.+++|++++.+|+
T Consensus 243 ~------------------~~~~~~~~~~~~~v~~l~~spdg~~l~ 270 (753)
T 3jro_A 243 W------------------KKTLLKEEKFPDVLWRASWSLSGNVLA 270 (753)
T ss_dssp C------------------BCCBSSSSCCSSCCCCEEECTTTCCEE
T ss_pred c------------------eeEEeccCCCCCceEEEEEcCCCCEEE
Confidence 1 111223455778899999999998887
No 120
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=9.2e-30 Score=275.81 Aligned_cols=234 Identities=15% Similarity=0.202 Sum_probs=193.7
Q ss_pred EEEEecCCCceEEEEECCCCCEEEEEe-----------CCCeEEEEeCCCCc--------------------eeeeccCc
Q psy14440 380 CYTLLNARQQVTCAEISEDVSILAVGF-----------SESYIKLWSLVPQK--------------------LKAMKSSD 428 (711)
Q Consensus 380 ~~tl~~h~~~V~~l~fs~dg~~LatG~-----------~dg~I~vWdl~~~~--------------------~~~~~~~~ 428 (711)
.+++..|...|.|++++ ++.+++|. .|+.||+|++.... ++.+.+++
T Consensus 66 ~~~l~~~~~~v~s~~~~--~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSp 143 (365)
T 4h5i_A 66 EFALEDNDDSPTAIDAS--KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISR 143 (365)
T ss_dssp EEECCTTSCCCCEEEEE--TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECT
T ss_pred EEEccCCCCceEEEEeC--CCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcC
Confidence 45677888889888775 44666654 57789999875432 22345566
Q ss_pred ccccccc--ccCCcEEEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEE--EecCCCC
Q psy14440 429 QLQDIEM--ECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV--YKGHGHP 504 (711)
Q Consensus 429 ~~~~l~~--~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~--~~~h~~~ 504 (711)
++..+++ ++.|+.|++||..+++....+. |.+.|++++|+|||++|++++.++ +++|+..++..+.. ..+|...
T Consensus 144 Dg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~~~~~~~~~ 221 (365)
T 4h5i_A 144 EGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIARKTDFDKNWS 221 (365)
T ss_dssp TSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEEEECCCCTTEE
T ss_pred CCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEecccee-EEEEEeccCcceeeeecCCCCCC
Confidence 6666654 4578999999999999888875 778899999999999999998655 67777777766543 4568889
Q ss_pred EEEEEEcCCCCEEEEEECCC----eEEEEECCCCce----eEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCC
Q psy14440 505 VWDIKFSPHGYYFASAGHDR----MARLWATDSYHP----LRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTG 576 (711)
Q Consensus 505 V~~v~~sp~g~~l~sgs~Dg----~i~lwd~~~~~~----~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~ 576 (711)
|.+++|+|++.++++++.|+ .+++|++..... ...+.+|...|++++|+|+|++||+|+.|++|+|||++++
T Consensus 222 v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~ 301 (365)
T 4h5i_A 222 LSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDL 301 (365)
T ss_dssp EEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTT
T ss_pred EEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCC
Confidence 99999999999999999887 688899876643 3467789999999999999999999999999999999999
Q ss_pred cEEEEe-eCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy14440 577 SHVRLL-TGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617 (711)
Q Consensus 577 ~~v~~~-~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~s 617 (711)
++++.+ .+|...|++++|||||++||||+.|++|+|||+..
T Consensus 302 ~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 302 SMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred cEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 999875 78999999999999999999999999999999964
No 121
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=1e-28 Score=263.51 Aligned_cols=245 Identities=18% Similarity=0.224 Sum_probs=209.5
Q ss_pred EEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecc
Q psy14440 380 CYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGH 459 (711)
Q Consensus 380 ~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h 459 (711)
...+.+|.+.|++++|++++++|++|+.||.|++|++.+.+ ...+.+|
T Consensus 79 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~--------------------------------~~~~~~~ 126 (368)
T 3mmy_A 79 PKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQ--------------------------------AIQIAQH 126 (368)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE--------------------------------EEEEEEC
T ss_pred EEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCC--------------------------------ceeeccc
Confidence 36788899999999999999999999999999999986432 1224569
Q ss_pred cCCEEEEEE--cCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCcee
Q psy14440 460 EGPVRKLSF--SPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPL 537 (711)
Q Consensus 460 ~~~V~~l~f--spdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~ 537 (711)
.+.|++++| ++++++|++++.||+|++||+.+++.+..+..+. .+.++.+. +..+++++.++.+++|+++.....
T Consensus 127 ~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~ 203 (368)
T 3mmy_A 127 DAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVI--YPMAVVATAERGLIVYQLENQPSE 203 (368)
T ss_dssp SSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEE--TTEEEEEEGGGCEEEEECSSSCEE
T ss_pred cCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEec--CCeeEEEeCCCcEEEEEeccccch
Confidence 999999999 8999999999999999999999999988888665 66667666 458899999999999999876443
Q ss_pred EEe--ecCCCCeeEEEEcCCCCE----EEEEEcCCcEEEEECCCC---cEEEEeeCCCC------------CeEEEEEec
Q psy14440 538 RLF--VGHYSDVDCVQFHPNSNY----VATGSSDRTIRLWDCVTG---SHVRLLTGHKA------------PVYALSFSV 596 (711)
Q Consensus 538 ~~~--~~h~~~V~~v~~sp~~~~----latgs~Dg~I~iwD~~~~---~~v~~~~~h~~------------~I~~la~sp 596 (711)
... ..+...+.++++.++... +++|+.||.|++||++.. ..+..+.+|.. .|++++|+|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp 283 (368)
T 3mmy_A 204 FRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHP 283 (368)
T ss_dssp EEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECT
T ss_pred hhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEec
Confidence 322 234456677777765554 999999999999999987 56778888876 799999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 597 CGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 597 dg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
+|++|++|+.||.|++||+.+++.+..+.+|...|++++|+++|++|++|+.|+..+.|++-.
T Consensus 284 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~~ 346 (368)
T 3mmy_A 284 VHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYN 346 (368)
T ss_dssp TTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGCC
T ss_pred CCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccccccccccC
Confidence 999999999999999999999999999999999999999999999999999998777666544
No 122
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.5e-29 Score=269.10 Aligned_cols=229 Identities=13% Similarity=0.100 Sum_probs=194.5
Q ss_pred ccccccccccCCcEEEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECC---------CCeEEEEE
Q psy14440 428 DQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL---------LWRCLVVY 498 (711)
Q Consensus 428 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~---------t~~~~~~~ 498 (711)
.+...++.++.|+.|++||..+++.+..+. .+.|.++.|+|+ +++++.|++|++|+.. +++.+..+
T Consensus 46 ~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~ 120 (343)
T 3lrv_A 46 YDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREI 120 (343)
T ss_dssp EEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEe
Confidence 455678899999999999999998888776 567888899888 9999999999999665 55545555
Q ss_pred e-cCCCCEEEEEEcC--CCCEEEEEECCCeEEEEECCCCceeEEee-cCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECC
Q psy14440 499 K-GHGHPVWDIKFSP--HGYYFASAGHDRMARLWATDSYHPLRLFV-GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCV 574 (711)
Q Consensus 499 ~-~h~~~V~~v~~sp--~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~-~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~ 574 (711)
. +|...|.+++|+| ++++|++|+.||+|++||+++++.+..+. .|...|.+++|+|++.+|++|+.||+|++||++
T Consensus 121 ~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~ 200 (343)
T 3lrv_A 121 EVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLS 200 (343)
T ss_dssp ECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESS
T ss_pred ecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 4 6778999999999 99999999999999999999998877664 455689999999999999999999999999999
Q ss_pred CCcEE-EEeeC-CCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeC---CCCCEE--EEEEeCCCCEEEEEe
Q psy14440 575 TGSHV-RLLTG-HKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTG---HTDVVR--ALCFSRDGNILASSG 647 (711)
Q Consensus 575 ~~~~v-~~~~~-h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~---h~~~V~--sl~fspdg~~Lasgs 647 (711)
+++.+ ..+.+ |.+.|++++|+|+|.+|++|+ |+.|++||+++++.+..+.. |...+. +++|+++|++|++|+
T Consensus 201 ~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s 279 (343)
T 3lrv_A 201 SPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYS 279 (343)
T ss_dssp CTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEE
T ss_pred CCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEec
Confidence 99988 88888 999999999999999999999 55999999999876555443 333443 699999999999999
Q ss_pred C-CCcEEEEeCCCCCC
Q psy14440 648 Q-DCSVKLWDFAKLSD 662 (711)
Q Consensus 648 ~-Dg~V~iWdl~~~~~ 662 (711)
. |+.|+||++.+...
T Consensus 280 ~~d~~i~v~~~~~~~~ 295 (343)
T 3lrv_A 280 NESNSLTIYKFDKKTK 295 (343)
T ss_dssp TTTTEEEEEEECTTTC
T ss_pred CCCCcEEEEEEccccc
Confidence 8 99999999976443
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=3.9e-28 Score=255.89 Aligned_cols=251 Identities=16% Similarity=0.099 Sum_probs=189.2
Q ss_pred eEEEEEecCCCceEEEEECCCCC-EEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEe
Q psy14440 378 IACYTLLNARQQVTCAEISEDVS-ILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTL 456 (711)
Q Consensus 378 ~~~~tl~~h~~~V~~l~fs~dg~-~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l 456 (711)
.+.|+++.|...|..+.+.||.. ++.++-. +++...++.+..+++ |..+. ....-
T Consensus 77 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-------~~~~~~v~sla~spd---------~~~~~--------~~l~s 132 (356)
T 2w18_A 77 EKLYTWHFAEVPVLQIVPVPDVYNLVCVALG-------NLEIREIRALFCSSD---------DESEK--------QVLLK 132 (356)
T ss_dssp EEEEEEECCSSCEEEECCCTTCCSCEEEEEC-------SSSEEEEEEECC---------------CC--------EEEEE
T ss_pred eeeEEEeccCceeEEEEEcCcccceeeeeec-------cccccceEEEEECCC---------ccccc--------cEEEe
Confidence 68899999999999999999764 4433322 233333333433333 11111 11111
Q ss_pred ecccCCEEEEEEcCCCCEEEEEe--CCCeEEEEEC-CCCeEEEEEecCCCCEEEEEEcC---CCCEEEEEECCCeEEEEE
Q psy14440 457 VGHEGPVRKLSFSPDRSLLLSCS--QDNTIRLWSL-LLWRCLVVYKGHGHPVWDIKFSP---HGYYFASAGHDRMARLWA 530 (711)
Q Consensus 457 ~~h~~~V~~l~fspdg~~L~s~s--~Dg~V~iwdl-~t~~~~~~~~~h~~~V~~v~~sp---~g~~l~sgs~Dg~i~lwd 530 (711)
.+|...|.++ ++++.+.+++ .|++|++|++ .+++.+..+.+|...+..++|++ ++.+|++|+.|++|+|||
T Consensus 133 ~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWD 209 (356)
T 2w18_A 133 SGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWN 209 (356)
T ss_dssp EEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEE
T ss_pred CCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEE
Confidence 2344444444 4665555543 5999999999 55888889999999999999999 779999999999999999
Q ss_pred CCCCceeEEeecCCC---CeeEEEEcCCCCEE------------EEEEcCCcEEEEECCCCcEEEEe-----eCCCCCeE
Q psy14440 531 TDSYHPLRLFVGHYS---DVDCVQFHPNSNYV------------ATGSSDRTIRLWDCVTGSHVRLL-----TGHKAPVY 590 (711)
Q Consensus 531 ~~~~~~~~~~~~h~~---~V~~v~~sp~~~~l------------atgs~Dg~I~iwD~~~~~~v~~~-----~~h~~~I~ 590 (711)
+.+++.++++.+|.. .+.+++|+|+|.++ ++|+.|++|++||..+++.+..+ .+|...+.
T Consensus 210 l~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~l 289 (356)
T 2w18_A 210 LKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFL 289 (356)
T ss_dssp TTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEE
T ss_pred CCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeE
Confidence 999999999987543 57788999999886 56788999999999999988776 37776665
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEE-EEEEeCCCCEEEEEeCCCcEEEEeC
Q psy14440 591 ALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVR-ALCFSRDGNILASSGQDCSVKLWDF 657 (711)
Q Consensus 591 ~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~-sl~fspdg~~Lasgs~Dg~V~iWdl 657 (711)
+..++ +.++++|+.||+|+|||+.+|+++.++.+|...+. +++|+|||++|++|+.|++|+|||+
T Consensus 290 sg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 290 EGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred ccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 55554 88999999999999999999999999999987655 5899999999999999999999996
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=4.4e-27 Score=254.92 Aligned_cols=257 Identities=13% Similarity=0.104 Sum_probs=210.6
Q ss_pred CEEEEEeCCCeEEEEeCCCCcee----------eeccCcccccc-ccccCCcEEEEEecCCCeeEEEeecccCCEEEEEE
Q psy14440 400 SILAVGFSESYIKLWSLVPQKLK----------AMKSSDQLQDI-EMECDDILVRIMDERNAETTRTLVGHEGPVRKLSF 468 (711)
Q Consensus 400 ~~LatG~~dg~I~vWdl~~~~~~----------~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~f 468 (711)
.++++|+.|+.|++||+.++++. .+..+.+...+ +.+..++.|++||..+++....+..|. .+.+++|
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~ 81 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAV 81 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEE
Confidence 35677777888888887665432 23334444444 344567788888888888877777665 8999999
Q ss_pred cCCCCEEEEE-eCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEE-EEEECCCeEEEEECCCCceeEEeecCCCC
Q psy14440 469 SPDRSLLLSC-SQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYF-ASAGHDRMARLWATDSYHPLRLFVGHYSD 546 (711)
Q Consensus 469 spdg~~L~s~-s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l-~sgs~Dg~i~lwd~~~~~~~~~~~~h~~~ 546 (711)
++++++|+++ +.|++|++||+.+++.+..+..+ ..+.+++|+++|+++ ++++.|+.|++||+.+++.+..+..+ ..
T Consensus 82 spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~ 159 (391)
T 1l0q_A 82 SPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RS 159 (391)
T ss_dssp CTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SS
T ss_pred CCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CC
Confidence 9999988655 46799999999999998888754 568999999999977 67888999999999999888888765 55
Q ss_pred eeEEEEcCCCCEE-EEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEe---CCCcEEEEECCCCeEEE
Q psy14440 547 VDCVQFHPNSNYV-ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAG---GDGNVHMWDLSNGHLLT 622 (711)
Q Consensus 547 V~~v~~sp~~~~l-atgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs---~Dg~I~iwDl~sg~~i~ 622 (711)
+.+++|+|++++| ++++.++.|++||+++++.+..+. +...+.+++|+++|++|++++ .++.|++||+.+++.+.
T Consensus 160 ~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~ 238 (391)
T 1l0q_A 160 PKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITA 238 (391)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEE
T ss_pred cceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEE
Confidence 7999999999988 566788999999999998887776 556789999999999999888 68999999999999999
Q ss_pred EeeCCCCCEEEEEEeCCCCEE-EEEeCCCcEEEEeCCCCC
Q psy14440 623 LLTGHTDVVRALCFSRDGNIL-ASSGQDCSVKLWDFAKLS 661 (711)
Q Consensus 623 ~l~~h~~~V~sl~fspdg~~L-asgs~Dg~V~iWdl~~~~ 661 (711)
.+..|. .+.+++|+++|++| ++++.|+.|++||+.+..
T Consensus 239 ~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~ 277 (391)
T 1l0q_A 239 RIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNT 277 (391)
T ss_dssp EEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred EEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCc
Confidence 888765 47899999999977 677889999999998643
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=1.7e-27 Score=261.85 Aligned_cols=256 Identities=13% Similarity=0.066 Sum_probs=215.5
Q ss_pred CccccccccccCCcEEEEEecCCCeeEE-----EeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecC
Q psy14440 427 SDQLQDIEMECDDILVRIMDERNAETTR-----TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGH 501 (711)
Q Consensus 427 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~-----~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h 501 (711)
+++...++.+..++.|++||..+++... .+.+|.+.|.+++|+++++++++++.|+.|++||+.+++.+..+..|
T Consensus 131 s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~ 210 (433)
T 3bws_A 131 IDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLT 210 (433)
T ss_dssp SSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECS
T ss_pred eCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCC
Confidence 3444455566678889999999888877 45589999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEEcCCCCEEEEEE-CCCeEEEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEE--------cCCcEEEEE
Q psy14440 502 GHPVWDIKFSPHGYYFASAG-HDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGS--------SDRTIRLWD 572 (711)
Q Consensus 502 ~~~V~~v~~sp~g~~l~sgs-~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs--------~Dg~I~iwD 572 (711)
...+.+++|++++.++++++ .|+.|++||+++++.+..+..+ ..+.+++|+|++++|++++ .||.|++||
T Consensus 211 ~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d 289 (433)
T 3bws_A 211 GKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYS 289 (433)
T ss_dssp SSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEE
T ss_pred CCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEE
Confidence 99999999999999885554 8999999999999888877654 4599999999999999988 488999999
Q ss_pred CCCCcEEEEeeCCCCCeEEEEEecCCCEE-EEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeC---
Q psy14440 573 CVTGSHVRLLTGHKAPVYALSFSVCGRFL-ASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQ--- 648 (711)
Q Consensus 573 ~~~~~~v~~~~~h~~~I~~la~spdg~~L-asgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~--- 648 (711)
+.+++.+..+ .|...+.+++|+++|+++ ++++.|+.|++||+.+++.+..+. +...+.+++|+++|++|++++.
T Consensus 290 ~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~ 367 (433)
T 3bws_A 290 MDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPN 367 (433)
T ss_dssp TTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCC
T ss_pred CCCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCC
Confidence 9999877765 456689999999999755 566899999999999999888876 6778999999999999988876
Q ss_pred ------------CCcEEEEeCCCCCCccCccccccccccccccccccceeeecccCCcceEEEEEccCCeeee
Q psy14440 649 ------------DCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 649 ------------Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
||.|++||+.+.. .+..+.. ...+.+++|++++.+|+
T Consensus 368 ~~~~~~~~~g~~dg~v~~~d~~~~~-----------------------~~~~~~~-~~~~~~~~~s~dg~~l~ 416 (433)
T 3bws_A 368 HPTEGYLKKGLVLGKVYVIDTTTDT-----------------------VKEFWEA-GNQPTGLDVSPDNRYLV 416 (433)
T ss_dssp CTTTCTTSCCSSCCEEEEEETTTTE-----------------------EEEEEEC-SSSEEEEEECTTSCEEE
T ss_pred ccccccccccccceEEEEEECCCCc-----------------------EEEEecC-CCCCceEEEcCCCCEEE
Confidence 5799999986521 2223333 34688999999998775
No 126
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.5e-28 Score=272.81 Aligned_cols=243 Identities=11% Similarity=0.064 Sum_probs=194.6
Q ss_pred eeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEe-
Q psy14440 421 LKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYK- 499 (711)
Q Consensus 421 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~- 499 (711)
+..+.+++++..++.++.|++|+ |...+ ..+.+|.+.|++++|+|+| .++++.+|+.+ ....+.
T Consensus 18 v~sv~~SpDG~~iASas~D~TV~--d~~~~---~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~---~~~~~~~ 82 (588)
T 2j04_A 18 KNNLTWARDGTLYLTTFPDISIG--QPKYA---KDINCNSKNLFHVKEFPLE-------FENKLDFELAQ---QNGLLNS 82 (588)
T ss_dssp SCCEEECTTSCEEEECSSSEEEE--EECCC---SCCSSBGGGTEEEEEECCC-------CCCTTTTSCCC---SSCSSTT
T ss_pred EEEEEECCCCCEEEEEcCCceee--ccccc---ceecCCCccEEEEEECCCC-------CcceEEEEeCC---CceEeec
Confidence 34577888999999999999999 64444 3447999999999999998 45655555543 222222
Q ss_pred cCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEeecCCC-----CeeEEEEcCCCCEEEEEEcCCcEEEEECC
Q psy14440 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYS-----DVDCVQFHPNSNYVATGSSDRTIRLWDCV 574 (711)
Q Consensus 500 ~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~~-----~V~~v~~sp~~~~latgs~Dg~I~iwD~~ 574 (711)
.|...|++++|+|+|.++|+++.||+|++||.+. .+..+. |.. .|.+++|||+|++||+|+.||+|+|||+.
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~ 159 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR 159 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 4678899999999999999999999999999654 666666 665 59999999999999999999999999999
Q ss_pred CCc-------EEEEe----eCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeE---EEEe-eCCCCCEEEEEEeCC
Q psy14440 575 TGS-------HVRLL----TGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHL---LTLL-TGHTDVVRALCFSRD 639 (711)
Q Consensus 575 ~~~-------~v~~~----~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~---i~~l-~~h~~~V~sl~fspd 639 (711)
++. .+.++ .+|.+.|.+++|+||| +++++.|++|++||+.+++. ...+ .+|...|.+++|+
T Consensus 160 ~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs-- 235 (588)
T 2j04_A 160 KNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV-- 235 (588)
T ss_dssp CCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--
T ss_pred CCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--
Confidence 886 36776 6788899999999999 88889999999999988773 3566 4788999999999
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCCccCccccccccccccccccccceeeecccCCcceEEEEE--ccCCeeee
Q psy14440 640 GNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIF--SRRNILLR 709 (711)
Q Consensus 640 g~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~F--s~~n~lla 709 (711)
|+.||+++ +|+|++||+..... .....+|...|+.++| +++++.|+
T Consensus 236 g~~LASa~-~~tIkLWd~~~~~~-----------------------~~~~~gh~~~V~~va~~~s~d~~~La 283 (588)
T 2j04_A 236 DYKVVLTC-PGYVHKIDLKNYSI-----------------------SSLKTGSLENFHIIPLNHEKESTILL 283 (588)
T ss_dssp TTEEEEEC-SSEEEEEETTTTEE-----------------------EEEECSCCSCCCEEEETTCSSCEEEE
T ss_pred CCEEEEEe-CCeEEEEECCCCeE-----------------------EEEEcCCCceEEEEEeeeCCCCCEEE
Confidence 68999997 79999999875221 0111156677777777 77776665
No 127
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=1.6e-27 Score=251.27 Aligned_cols=223 Identities=17% Similarity=0.178 Sum_probs=178.9
Q ss_pred EEEEec-CCCceEEEEECCC----CCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEec-CCCeeE
Q psy14440 380 CYTLLN-ARQQVTCAEISED----VSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDE-RNAETT 453 (711)
Q Consensus 380 ~~tl~~-h~~~V~~l~fs~d----g~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~ 453 (711)
+.++.+ +...|++++|++| +.++++|+.+ +++|++.++++.... ....++.|++|+. .+++..
T Consensus 103 ~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~g~lv~ss---------~~g~d~~V~~~~~s~dG~~~ 171 (356)
T 2w18_A 103 CVALGNLEIREIRALFCSSDDESEKQVLLKSGNI--KAVLGLTKRRLVSSS---------GTLSDQQVEVMTFAEDGGGK 171 (356)
T ss_dssp EEEECSSSEEEEEEECC------CCEEEEEEEEE--EEEEEETTTEEEEEE---------SSSTTCEEEEEEECTTSCEE
T ss_pred eeeeccccccceEEEEECCCccccccEEEeCCCe--EEEEecCCCcEEEec---------ccCCCCcEEEEEECCCCcee
Confidence 344444 4568999999999 9999998854 889998554432110 1225889999998 558888
Q ss_pred EEeecccCCEEEEEEcC---CCCEEEEEeCCCeEEEEECCCCeEEEEEecCC---CCEEEEEEcCCCCEE----------
Q psy14440 454 RTLVGHEGPVRKLSFSP---DRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHG---HPVWDIKFSPHGYYF---------- 517 (711)
Q Consensus 454 ~~l~~h~~~V~~l~fsp---dg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~---~~V~~v~~sp~g~~l---------- 517 (711)
..+.+|...++.++|++ ++..|++|+.|++|+|||+.+++++.++.+|. ..+.+++|+|+|.++
T Consensus 172 ~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w 251 (356)
T 2w18_A 172 ENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKE 251 (356)
T ss_dssp EEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------
T ss_pred eeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcc
Confidence 89999999999999999 78999999999999999999999999998754 367788999999876
Q ss_pred --EEEECCCeEEEEECCCCceeEEe-----ecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeE
Q psy14440 518 --ASAGHDRMARLWATDSYHPLRLF-----VGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVY 590 (711)
Q Consensus 518 --~sgs~Dg~i~lwd~~~~~~~~~~-----~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~ 590 (711)
++|+.|++|++||..+++.+..+ .+|...+.+..++ +.++|+|+.|++|+|||+.+++++.++.+|...+.
T Consensus 252 ~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vv 329 (356)
T 2w18_A 252 SESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHW 329 (356)
T ss_dssp ------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCC
T ss_pred eeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeE
Confidence 56889999999999999887765 3676665555544 88999999999999999999999999999987655
Q ss_pred -EEEEecCCCEEEEEeCCCcEEEEEC
Q psy14440 591 -ALSFSVCGRFLASAGGDGNVHMWDL 615 (711)
Q Consensus 591 -~la~spdg~~Lasgs~Dg~I~iwDl 615 (711)
+++|||||++|++|+.|++|+|||+
T Consensus 330 s~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 330 SFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEEECCCCCEEEEEECCCcEEEecC
Confidence 5899999999999999999999995
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=4.3e-26 Score=251.41 Aligned_cols=288 Identities=15% Similarity=0.119 Sum_probs=226.7
Q ss_pred CCceEEEEECCCC-CEEEEEe----CCC----eEEEEeC--CCCcee-e--eccCc------------------------
Q psy14440 387 RQQVTCAEISEDV-SILAVGF----SES----YIKLWSL--VPQKLK-A--MKSSD------------------------ 428 (711)
Q Consensus 387 ~~~V~~l~fs~dg-~~LatG~----~dg----~I~vWdl--~~~~~~-~--~~~~~------------------------ 428 (711)
...++..+|+..| .++++|+ .+| .|+|||+ .+++.. . +....
T Consensus 62 ~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~ 141 (415)
T 2hqs_A 62 AQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGA 141 (415)
T ss_dssp GGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCc
Confidence 3578888998887 4666876 467 8999999 665532 1 11110
Q ss_pred cccccccccCC------cEEEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCC---eEEEEECCCCeEEEEEe
Q psy14440 429 QLQDIEMECDD------ILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDN---TIRLWSLLLWRCLVVYK 499 (711)
Q Consensus 429 ~~~~l~~~~~d------~~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg---~V~iwdl~t~~~~~~~~ 499 (711)
....++..+.+ +.|++||.. +...+.+.+|.+.|.+++|+|||++|++++.++ +|++||+.+++.. .+.
T Consensus 142 ~~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~ 219 (415)
T 2hqs_A 142 FRTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVA 219 (415)
T ss_dssp TTCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEE
T ss_pred CCCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-Eee
Confidence 02233333332 799999986 455678889999999999999999999999885 9999999998875 466
Q ss_pred cCCCCEEEEEEcCCCCEEE-EEECCCe--EEEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEc-CC--cEEEEEC
Q psy14440 500 GHGHPVWDIKFSPHGYYFA-SAGHDRM--ARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSS-DR--TIRLWDC 573 (711)
Q Consensus 500 ~h~~~V~~v~~sp~g~~l~-sgs~Dg~--i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~-Dg--~I~iwD~ 573 (711)
.|...+.+++|+|+|++|+ +++.++. |++||+.+++. ..+..|...+.+++|+|+|++|++++. ++ .|++||+
T Consensus 220 ~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~ 298 (415)
T 2hqs_A 220 SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNI 298 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET
T ss_pred cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEEC
Confidence 7888999999999999888 6666554 99999998775 566778889999999999999998886 44 6888899
Q ss_pred CCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCC---CcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCC
Q psy14440 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGD---GNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDC 650 (711)
Q Consensus 574 ~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~D---g~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg 650 (711)
.+++. ..+..|...+.+++|+|||++|++++.+ +.|++||+.+++.. .+..|. .+.+++|+|+|++|++++.|+
T Consensus 299 ~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~s~~~ 375 (415)
T 2hqs_A 299 NGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYSSSQG 375 (415)
T ss_dssp TSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEEEEET
T ss_pred CCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEEEcCC
Confidence 88874 4556677889999999999999988764 58999999998874 455554 889999999999999988877
Q ss_pred ---cEEEEeCCCCCCccCccccccccccccccccccceeeecccCCcceEEEEEccC
Q psy14440 651 ---SVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRR 704 (711)
Q Consensus 651 ---~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~ 704 (711)
.|++||+.. ..+..+..+...|.+++|+|-
T Consensus 376 ~~~~l~~~d~~g------------------------~~~~~l~~~~~~v~~~~~~~~ 408 (415)
T 2hqs_A 376 MGSVLNLVSTDG------------------------RFKARLPATDGQVKFPAWSPY 408 (415)
T ss_dssp TEEEEEEEETTS------------------------CCEEECCCSSSEEEEEEECCC
T ss_pred CccEEEEEECCC------------------------CcEEEeeCCCCCCcCCccccc
Confidence 799999753 123346677889999999984
No 129
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=1.9e-25 Score=242.05 Aligned_cols=247 Identities=9% Similarity=0.079 Sum_probs=207.1
Q ss_pred cccccCCcEEEEEecCCCeeEEEeecccCCEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEc
Q psy14440 433 IEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLL-LSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFS 511 (711)
Q Consensus 433 l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L-~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~s 511 (711)
++.++.++.|++||..+++....+.+|.. +.+++|++++++| ++++.|++|++||+.+++.+..+..+. .+.+++|+
T Consensus 5 ~vs~~~d~~v~v~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~s 82 (391)
T 1l0q_A 5 YIANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVS 82 (391)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEEC
T ss_pred EEEcCCCCEEEEEECCCCeEEEEeecCCC-cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEEC
Confidence 45667899999999999999998887765 8999999999977 677789999999999999999888655 89999999
Q ss_pred CCCCEEEEEE-CCCeEEEEECCCCceeEEeecCCCCeeEEEEcCCCCEE-EEEEcCCcEEEEECCCCcEEEEeeCCCCCe
Q psy14440 512 PHGYYFASAG-HDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV-ATGSSDRTIRLWDCVTGSHVRLLTGHKAPV 589 (711)
Q Consensus 512 p~g~~l~sgs-~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l-atgs~Dg~I~iwD~~~~~~v~~~~~h~~~I 589 (711)
|+++++++++ .++.|++||+.+++.+..+..+ ..+.+++|++++++| ++++.|+.|++||+.+++.+..+..| ..+
T Consensus 83 pdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~ 160 (391)
T 1l0q_A 83 PDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSP 160 (391)
T ss_dssp TTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSE
T ss_pred CCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCc
Confidence 9999876554 6799999999999888877654 568999999999987 67778999999999999998888765 457
Q ss_pred EEEEEecCCCEE-EEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEe---CCCcEEEEeCCCCCCccC
Q psy14440 590 YALSFSVCGRFL-ASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSG---QDCSVKLWDFAKLSDEVG 665 (711)
Q Consensus 590 ~~la~spdg~~L-asgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs---~Dg~V~iWdl~~~~~~~~ 665 (711)
.+++|+++|++| ++++.++.|++||+++++.+..+. +...+.+++|+++|++|++++ .++.|++||+.+..
T Consensus 161 ~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~---- 235 (391)
T 1l0q_A 161 KGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK---- 235 (391)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE----
T ss_pred ceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCe----
Confidence 999999999988 577788999999999999888776 456789999999999999888 68999999987521
Q ss_pred ccccccccccccccccccceeeecccCCcceEEEEEccCCeee
Q psy14440 666 TEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILL 708 (711)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~ll 708 (711)
.+..+..+. .+.+++|++++.+|
T Consensus 236 -------------------~~~~~~~~~-~~~~~~~s~dg~~l 258 (391)
T 1l0q_A 236 -------------------ITARIPVGP-DPAGIAVTPDGKKV 258 (391)
T ss_dssp -------------------EEEEEECCS-SEEEEEECTTSSEE
T ss_pred -------------------EEEEEecCC-CccEEEEccCCCEE
Confidence 122333333 46788888888654
No 130
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.95 E-value=2.7e-26 Score=247.34 Aligned_cols=231 Identities=16% Similarity=0.159 Sum_probs=182.6
Q ss_pred ceEEEEECCCCCEE-EEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEEEE
Q psy14440 389 QVTCAEISEDVSIL-AVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLS 467 (711)
Q Consensus 389 ~V~~l~fs~dg~~L-atG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~ 467 (711)
.+.+++++++++++ ++|+.|+.|+|||+.+ ++.+..+. |...|.+++
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~-------------------------------~~~~~~~~-~~~~v~~v~ 107 (355)
T 3vu4_A 60 HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVK-------------------------------KQDVSRIK-VDAPVKDLF 107 (355)
T ss_dssp CCCEEEECTTSSEEEEECSSTTEEEEEETTT-------------------------------TEEEEEEE-CSSCEEEEE
T ss_pred CeEEEEEcCCCCEEEEEECCccEEEEEECCC-------------------------------CcEEEEEE-CCCceEEEE
Confidence 57778888888777 4567778888888743 34444444 567899999
Q ss_pred EcCCCCEEEEEeCCCeEEEEECCCC-eEEEEEecCCCCEEEEEEcCCCCEEEE--EECCCeEEEEECCCCc---------
Q psy14440 468 FSPDRSLLLSCSQDNTIRLWSLLLW-RCLVVYKGHGHPVWDIKFSPHGYYFAS--AGHDRMARLWATDSYH--------- 535 (711)
Q Consensus 468 fspdg~~L~s~s~Dg~V~iwdl~t~-~~~~~~~~h~~~V~~v~~sp~g~~l~s--gs~Dg~i~lwd~~~~~--------- 535 (711)
|+++. ++++ .|+.|++||+.++ +.+..+.. ....+++++ .++++ |+.||.|++||+.++.
T Consensus 108 ~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~ 179 (355)
T 3vu4_A 108 LSREF--IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGV 179 (355)
T ss_dssp ECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC-----------
T ss_pred EcCCE--EEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccc
Confidence 98764 4444 4789999999887 65555544 444566666 56666 5799999999999765
Q ss_pred ------e-eEEeecCCCCeeEEEEcCCCCEEEEEEcCCc-EEEEECCCCcEEEEee-C-CCCCeEEEEEecCCCEEEEEe
Q psy14440 536 ------P-LRLFVGHYSDVDCVQFHPNSNYVATGSSDRT-IRLWDCVTGSHVRLLT-G-HKAPVYALSFSVCGRFLASAG 605 (711)
Q Consensus 536 ------~-~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~-I~iwD~~~~~~v~~~~-~-h~~~I~~la~spdg~~Lasgs 605 (711)
+ +..+.+|...|.+++|+|++++|++|+.||+ |++||+++++++..+. + |.+.|++++|+|+|++|++|+
T Consensus 180 ~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s 259 (355)
T 3vu4_A 180 QQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVS 259 (355)
T ss_dssp -------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEE
T ss_pred cccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEE
Confidence 2 7888999999999999999999999999999 9999999999999998 6 999999999999999999999
Q ss_pred CCCcEEEEECCCCeEE--EEee---------------------CCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 606 GDGNVHMWDLSNGHLL--TLLT---------------------GHTDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 606 ~Dg~I~iwDl~sg~~i--~~l~---------------------~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
.||+|+|||+..+... ..+. .+......++|+++|++|++++.||.+++|++..
T Consensus 260 ~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 260 DKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp TTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEE
T ss_pred CCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEc
Confidence 9999999999765311 1110 1112236789999999999999999999999864
No 131
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.94 E-value=3e-25 Score=261.80 Aligned_cols=296 Identities=12% Similarity=0.087 Sum_probs=228.5
Q ss_pred CCceEEEEECCCCCEEEEEeC-CC-----eEEEEeCCCCceee-----------------------------------ec
Q psy14440 387 RQQVTCAEISEDVSILAVGFS-ES-----YIKLWSLVPQKLKA-----------------------------------MK 425 (711)
Q Consensus 387 ~~~V~~l~fs~dg~~LatG~~-dg-----~I~vWdl~~~~~~~-----------------------------------~~ 425 (711)
...|.+++|||||++||+++. |+ .|++|++.+++... +.
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 357999999999999999998 88 89999998765332 23
Q ss_pred cCccccccccccCCcEEEEEecCCCe--eEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCC
Q psy14440 426 SSDQLQDIEMECDDILVRIMDERNAE--TTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGH 503 (711)
Q Consensus 426 ~~~~~~~l~~~~~d~~i~i~d~~~~~--~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~ 503 (711)
+++++..+++.+. +.|++||..++. ....+..|.+.+.+++|||||++|++++. ++|++||+.+++.......+..
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~~ 193 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADGST 193 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCCCS
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCCcc
Confidence 3445555655554 889999988773 45567788899999999999999999874 6899999999887765554443
Q ss_pred C----------------EEEEEEcCCCCEEEEEECCC---------------------------------eEEEEECCC-
Q psy14440 504 P----------------VWDIKFSPHGYYFASAGHDR---------------------------------MARLWATDS- 533 (711)
Q Consensus 504 ~----------------V~~v~~sp~g~~l~sgs~Dg---------------------------------~i~lwd~~~- 533 (711)
. +.+++|+|+|++|++++.|+ .|++||+.+
T Consensus 194 ~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~ 273 (741)
T 2ecf_A 194 TIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQ 273 (741)
T ss_dssp SEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTT
T ss_pred ceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCC
Confidence 2 37799999999999998766 889999988
Q ss_pred CceeEEee--cCCCCeeEEEEcCCCCEEEEEEc-----CCcEEEEECCCCcEEEEeeCCCC----CeEEEEEecCCCEEE
Q psy14440 534 YHPLRLFV--GHYSDVDCVQFHPNSNYVATGSS-----DRTIRLWDCVTGSHVRLLTGHKA----PVYALSFSVCGRFLA 602 (711)
Q Consensus 534 ~~~~~~~~--~h~~~V~~v~~sp~~~~latgs~-----Dg~I~iwD~~~~~~v~~~~~h~~----~I~~la~spdg~~La 602 (711)
++...... .|...+.+++| |||++|++++. ++.|++||+.++++...+..+.. .+.+++|+|||++++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~ 352 (741)
T 2ecf_A 274 AQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILW 352 (741)
T ss_dssp CCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEE
T ss_pred CceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEE
Confidence 77655543 37778999999 99999998764 56799999999998877766543 456899999999999
Q ss_pred EEeCCCcEEEEECC-CCeEEEEeeCCCCCEEEE-EEeCCCCEEEE-EeCCC--cEEEEeCCCCCCccCcccccccccccc
Q psy14440 603 SAGGDGNVHMWDLS-NGHLLTLLTGHTDVVRAL-CFSRDGNILAS-SGQDC--SVKLWDFAKLSDEVGTEEVNLSHSADI 677 (711)
Q Consensus 603 sgs~Dg~I~iwDl~-sg~~i~~l~~h~~~V~sl-~fspdg~~Las-gs~Dg--~V~iWdl~~~~~~~~~~~~~~~~~~~~ 677 (711)
+++.||.++||.+. +++ ...+..|...|.++ .|+++|+.|+. ++.++ .++||++.....
T Consensus 353 ~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~--------------- 416 (741)
T 2ecf_A 353 SSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGG--------------- 416 (741)
T ss_dssp EECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCC---------------
T ss_pred EecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCC---------------
Confidence 99999988888765 455 77888888888887 59999997755 44555 899999853111
Q ss_pred ccccccceeeecccCCcceEEEEEccCCeeee
Q psy14440 678 KNSSLAYLVRSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 678 ~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
.+..+.. ...+.+++||+|+..|+
T Consensus 417 -------~~~~l~~-~~~~~~~~~spdg~~l~ 440 (741)
T 2ecf_A 417 -------QPQRLSK-APGMHSASFARNASVYV 440 (741)
T ss_dssp -------CCEECCC-SCSEEEEEECTTSSEEE
T ss_pred -------Ceeeccc-CCCceEEEECCCCCEEE
Confidence 0111222 34567888888887765
No 132
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.93 E-value=1.6e-23 Score=238.76 Aligned_cols=296 Identities=11% Similarity=0.048 Sum_probs=233.2
Q ss_pred EECCCCCEEEEEeCCCeEEEEeCCCCcee----------eeccCccccccccccCCcEEEEEec--CCCeeEEEeecccC
Q psy14440 394 EISEDVSILAVGFSESYIKLWSLVPQKLK----------AMKSSDQLQDIEMECDDILVRIMDE--RNAETTRTLVGHEG 461 (711)
Q Consensus 394 ~fs~dg~~LatG~~dg~I~vWdl~~~~~~----------~~~~~~~~~~l~~~~~d~~i~i~d~--~~~~~~~~l~~h~~ 461 (711)
+|++++.++++++.|++|.+||..+.++. .+..+.+...+.+++.++.|.+||. .+++.+..+.. ..
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~ 222 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GI 222 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CS
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CC
Confidence 37889999999999999999999876542 2335566777888888899999999 78888888874 45
Q ss_pred CEEEEEEcC----CCCEEEEEeC-CCeEEEEECCCCeEEEEEecC-----------CCCEEEEEEcCCCC-EEEEEECCC
Q psy14440 462 PVRKLSFSP----DRSLLLSCSQ-DNTIRLWSLLLWRCLVVYKGH-----------GHPVWDIKFSPHGY-YFASAGHDR 524 (711)
Q Consensus 462 ~V~~l~fsp----dg~~L~s~s~-Dg~V~iwdl~t~~~~~~~~~h-----------~~~V~~v~~sp~g~-~l~sgs~Dg 524 (711)
.+.+++|+| ||++|++++. +++|.+||..+++++..+..+ ...+.++.+++++. ++++...++
T Consensus 223 ~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g 302 (543)
T 1nir_A 223 EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETG 302 (543)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred CcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCC
Confidence 679999999 9999999885 899999999999999888753 23789999999765 556667899
Q ss_pred eEEEEECCCCceeE--EeecCCCCeeEEEEcCCCCEEEEEE-cCCcEEEEECCCCcEEEEeeC----CCCCeEEEEEecC
Q psy14440 525 MARLWATDSYHPLR--LFVGHYSDVDCVQFHPNSNYVATGS-SDRTIRLWDCVTGSHVRLLTG----HKAPVYALSFSVC 597 (711)
Q Consensus 525 ~i~lwd~~~~~~~~--~~~~h~~~V~~v~~sp~~~~latgs-~Dg~I~iwD~~~~~~v~~~~~----h~~~I~~la~spd 597 (711)
+|.+||..+.+.+. .+ .+...+.++.|+|+++++++++ .+++|.+||+.+++++..+.. |.+....+ ++|+
T Consensus 303 ~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~ 380 (543)
T 1nir_A 303 KVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPK 380 (543)
T ss_dssp EEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETT
T ss_pred eEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCC
Confidence 99999998866544 33 3566788999999999877665 589999999999999988874 55444444 4677
Q ss_pred -CCEEEEEe-CCCcEEEEECCC-------CeEEEEeeCCCCCEEEEEEeCCCCEEEEEe-------CCCcEEEEeCCCCC
Q psy14440 598 -GRFLASAG-GDGNVHMWDLSN-------GHLLTLLTGHTDVVRALCFSRDGNILASSG-------QDCSVKLWDFAKLS 661 (711)
Q Consensus 598 -g~~Lasgs-~Dg~I~iwDl~s-------g~~i~~l~~h~~~V~sl~fspdg~~Lasgs-------~Dg~V~iWdl~~~~ 661 (711)
|.+++++. .|++|.|||+.+ ++++.++.+|.+.+..++|+|+|++|++++ .+++|.|||+.+..
T Consensus 381 ~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~ 460 (543)
T 1nir_A 381 YGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLD 460 (543)
T ss_dssp TEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTT
T ss_pred CccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCC
Confidence 66667765 689999999998 899999999998889999999999999987 27799999998765
Q ss_pred CccCccccccccccccccccccceee---ecccCCcceEEEEEccCCeeee
Q psy14440 662 DEVGTEEVNLSHSADIKNSSLAYLVR---SYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~t~~~pV~~v~Fs~~n~lla 709 (711)
..... ..+. ....+...|.++.|+++|..+.
T Consensus 461 ~~~~~-----------------~~v~~~~~~~~~~~~~~~~~~~~~g~~~~ 494 (543)
T 1nir_A 461 AKYQV-----------------LPIAEWADLGEGAKRVVQPEYNKRGDEVW 494 (543)
T ss_dssp SCCEE-----------------ECHHHHHCCCSSCCEEEEEEECSSSSEEE
T ss_pred CCeEE-----------------eechhhcccCCCCCceEeccCCCCCCEEE
Confidence 32110 0011 1233455788888888887664
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.92 E-value=3e-23 Score=236.55 Aligned_cols=280 Identities=15% Similarity=0.085 Sum_probs=221.4
Q ss_pred EEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeC--CCCce----------eeeccCc----ccccccccc-CCcEE
Q psy14440 380 CYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSL--VPQKL----------KAMKSSD----QLQDIEMEC-DDILV 442 (711)
Q Consensus 380 ~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl--~~~~~----------~~~~~~~----~~~~l~~~~-~d~~i 442 (711)
..++..+.. +.+++||+||++|++++.|+.|++||+ .+.++ ..+..++ +...+.+++ .++.|
T Consensus 172 ~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v 250 (543)
T 1nir_A 172 VKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQF 250 (543)
T ss_dssp EEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEE
T ss_pred EEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeE
Confidence 344542333 899999999999999999999999999 55442 2344555 666666665 47899
Q ss_pred EEEecCCCeeEEEeecc----------cC-CEEEEEEcCCCCE-EEEEeCCCeEEEEECCCCeEEE--EEecCCCCEEEE
Q psy14440 443 RIMDERNAETTRTLVGH----------EG-PVRKLSFSPDRSL-LLSCSQDNTIRLWSLLLWRCLV--VYKGHGHPVWDI 508 (711)
Q Consensus 443 ~i~d~~~~~~~~~l~~h----------~~-~V~~l~fspdg~~-L~s~s~Dg~V~iwdl~t~~~~~--~~~~h~~~V~~v 508 (711)
.+||..+++.+..+..+ .+ .+.++.+++++.. ++++..+++|.+||+.+.+.+. .+ .+...+.++
T Consensus 251 ~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~ 329 (543)
T 1nir_A 251 AIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDG 329 (543)
T ss_dssp EEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCE
T ss_pred EEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-ccCcCccCc
Confidence 99999999988887652 23 7899999997764 5666778999999998765443 33 366778899
Q ss_pred EEcCCCCEEEEEE-CCCeEEEEECCCCceeEEeec----CCCCeeEEEEcCC-CCEEEEEE-cCCcEEEEECCC------
Q psy14440 509 KFSPHGYYFASAG-HDRMARLWATDSYHPLRLFVG----HYSDVDCVQFHPN-SNYVATGS-SDRTIRLWDCVT------ 575 (711)
Q Consensus 509 ~~sp~g~~l~sgs-~Dg~i~lwd~~~~~~~~~~~~----h~~~V~~v~~sp~-~~~latgs-~Dg~I~iwD~~~------ 575 (711)
.|+|+|++|++++ .+++|.+||..+++.+..+.. |.+....+ ++|+ +..+++++ .|++|.+||+.+
T Consensus 330 ~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~ 408 (543)
T 1nir_A 330 GWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQY 408 (543)
T ss_dssp EECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTT
T ss_pred eECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchh
Confidence 9999999877665 689999999999998887764 55444343 4777 55666665 589999999998
Q ss_pred -CcEEEEeeCCCCCeEEEEEecCCCEEEEEe-------CCCcEEEEECCCCeEE-EEe--------eCCCCCEEEEEEeC
Q psy14440 576 -GSHVRLLTGHKAPVYALSFSVCGRFLASAG-------GDGNVHMWDLSNGHLL-TLL--------TGHTDVVRALCFSR 638 (711)
Q Consensus 576 -~~~v~~~~~h~~~I~~la~spdg~~Lasgs-------~Dg~I~iwDl~sg~~i-~~l--------~~h~~~V~sl~fsp 638 (711)
+++++++.+|.+.+..++++|+|++|++++ .+++|.|||+.+++.. ..+ ..+...+..+.|++
T Consensus 409 ~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 488 (543)
T 1nir_A 409 AWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNK 488 (543)
T ss_dssp BTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECS
T ss_pred cCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCC
Confidence 899999999998999999999999999987 2679999999998876 443 35677899999999
Q ss_pred CCCEEEEEe-----CCCcEEEEeCCCCCC
Q psy14440 639 DGNILASSG-----QDCSVKLWDFAKLSD 662 (711)
Q Consensus 639 dg~~Lasgs-----~Dg~V~iWdl~~~~~ 662 (711)
+|+.|+++. .|+.|.|||..++..
T Consensus 489 ~g~~~~~s~~~~~~~~~~i~v~D~~t~~~ 517 (543)
T 1nir_A 489 RGDEVWFSVWNGKNDSSALVVVDDKTLKL 517 (543)
T ss_dssp SSSEEEEEEECCTTSCCEEEEEETTTTEE
T ss_pred CCCEEEEEeecCCCCCCeEEEEECCCceE
Confidence 999888663 479999999987543
No 134
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=9.6e-24 Score=217.21 Aligned_cols=246 Identities=15% Similarity=0.119 Sum_probs=188.2
Q ss_pred CcEEEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEEEecC-CCCEEEEEEcCCCCE
Q psy14440 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLL-WRCLVVYKGH-GHPVWDIKFSPHGYY 516 (711)
Q Consensus 439 d~~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t-~~~~~~~~~h-~~~V~~v~~sp~g~~ 516 (711)
++.|++||..+++.. .+..|.+.|.+++|+|+|++|++++ ++.|++||+.+ ++.......+ ...+.+++|+|+|++
T Consensus 21 ~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 98 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGAL 98 (297)
T ss_dssp CEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSE
T ss_pred ceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCE
Confidence 344444444444433 4556889999999999999999987 78999999998 8777766666 367899999999999
Q ss_pred EEEEE--CCCeEEEE--ECCCCceeEEeecCCCCeeEEEEcCCCCEEE-EEEcCCcEEEEECC-CCcEEEEeeCCCCCeE
Q psy14440 517 FASAG--HDRMARLW--ATDSYHPLRLFVGHYSDVDCVQFHPNSNYVA-TGSSDRTIRLWDCV-TGSHVRLLTGHKAPVY 590 (711)
Q Consensus 517 l~sgs--~Dg~i~lw--d~~~~~~~~~~~~h~~~V~~v~~sp~~~~la-tgs~Dg~I~iwD~~-~~~~v~~~~~h~~~I~ 590 (711)
|++++ .++...+| +..++. ...+..+ ..+.+++|+|++++|+ +++.++.++||++. .+.....+..|...+.
T Consensus 99 l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 176 (297)
T 2ojh_A 99 YAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRND 176 (297)
T ss_dssp EEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEE
T ss_pred EEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccc
Confidence 99999 33455555 555544 3444433 3489999999999887 67789999999863 2334566777888999
Q ss_pred EEEEecCCCEEEEEe-CCCcEEEEECC-CCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCC-----------CcEEEEeC
Q psy14440 591 ALSFSVCGRFLASAG-GDGNVHMWDLS-NGHLLTLLTGHTDVVRALCFSRDGNILASSGQD-----------CSVKLWDF 657 (711)
Q Consensus 591 ~la~spdg~~Lasgs-~Dg~I~iwDl~-sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~D-----------g~V~iWdl 657 (711)
+++|+|+|++|++++ .++.+.||++. .+..+..+..|...+.+++|+++|++|++++.+ +.|++||+
T Consensus 177 ~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~ 256 (297)
T 2ojh_A 177 GPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDM 256 (297)
T ss_dssp EEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEET
T ss_pred cceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEec
Confidence 999999999888766 58999999886 566677788888889999999999999988876 56999998
Q ss_pred CCCCCccCccccccccccccccccccceeeecccCCcceEEEEEccCCeeee
Q psy14440 658 AKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
.... ...+..+..+...|.+++|++++..|+
T Consensus 257 ~~~~---------------------~~~~~~~~~~~~~~~~~~~spdg~~l~ 287 (297)
T 2ojh_A 257 DGGN---------------------VETLFDLFGGQGTMNSPNWSPDGDEFA 287 (297)
T ss_dssp TSCS---------------------CEEEEEEEESTTTSCSCCBCTTSSEEE
T ss_pred CCCC---------------------ceeeeccCCCCcccccceECCCCCEEE
Confidence 6421 112333445677888999999998776
No 135
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.92 E-value=3.8e-22 Score=212.18 Aligned_cols=265 Identities=11% Similarity=0.024 Sum_probs=207.6
Q ss_pred CCCceEEEEECCCCCEEEEEeCC-------CeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeec
Q psy14440 386 ARQQVTCAEISEDVSILAVGFSE-------SYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVG 458 (711)
Q Consensus 386 h~~~V~~l~fs~dg~~LatG~~d-------g~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~ 458 (711)
....+..++|++||+++++++.+ +.|.+||.. +++....+..
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~-------------------------------~~~~~~~~~~ 87 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPV-------------------------------TLEVTQAIHN 87 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTT-------------------------------TCCEEEEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCC-------------------------------CCeEEEEEec
Confidence 34678899999999998888754 456666654 3333344332
Q ss_pred ccCCEEEEEEcCCCCEEEEE-eCCCeEEEEECCCCeEEEEEecCCCC---------EEEEEEcCCCCEEEEEE--CCCeE
Q psy14440 459 HEGPVRKLSFSPDRSLLLSC-SQDNTIRLWSLLLWRCLVVYKGHGHP---------VWDIKFSPHGYYFASAG--HDRMA 526 (711)
Q Consensus 459 h~~~V~~l~fspdg~~L~s~-s~Dg~V~iwdl~t~~~~~~~~~h~~~---------V~~v~~sp~g~~l~sgs--~Dg~i 526 (711)
...+.+++|+++|++++++ ..++.|.+||..+++.+..+..+... +.+++|+++|+++++++ .++.|
T Consensus 88 -~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i 166 (353)
T 3vgz_A 88 -DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVI 166 (353)
T ss_dssp -SSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEE
T ss_pred -CCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceE
Confidence 2346789999999966555 55799999999999998888765432 78999999999877776 48899
Q ss_pred EEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeC----CCCCeEEEEEecCCCEEE
Q psy14440 527 RLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTG----HKAPVYALSFSVCGRFLA 602 (711)
Q Consensus 527 ~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~----h~~~I~~la~spdg~~La 602 (711)
.+||..+++.+..+..+...+.+++|+|+++++++++.++.|.+||+.+++.+..+.. +...+.+++|+|+|++|+
T Consensus 167 ~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 246 (353)
T 3vgz_A 167 WVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAF 246 (353)
T ss_dssp EEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEE
T ss_pred EEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEE
Confidence 9999999998888876667789999999999999999999999999999998877764 556788999999999887
Q ss_pred EEeC-CCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEe-CCCcEEEEeCCCCCCccCccccccccccccccc
Q psy14440 603 SAGG-DGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSG-QDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNS 680 (711)
Q Consensus 603 sgs~-Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs-~Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~ 680 (711)
+++. ++.|.+||+.+++.+..+..... .+++|+++|+++++++ .++.|.+||+.+..
T Consensus 247 ~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~------------------- 305 (353)
T 3vgz_A 247 ITDSKAAEVLVVDTRNGNILAKVAAPES--LAVLFNPARNEAYVTHRQAGKVSVIDAKSYK------------------- 305 (353)
T ss_dssp EEESSSSEEEEEETTTCCEEEEEECSSC--CCEEEETTTTEEEEEETTTTEEEEEETTTTE-------------------
T ss_pred EEeCCCCEEEEEECCCCcEEEEEEcCCC--ceEEECCCCCEEEEEECCCCeEEEEECCCCe-------------------
Confidence 7765 48999999999999888875443 5799999999665555 68999999986522
Q ss_pred cccceeeecccCCcceEEEEEccCCeee
Q psy14440 681 SLAYLVRSYKTKASPLLHLIFSRRNILL 708 (711)
Q Consensus 681 ~~~~~l~~~~t~~~pV~~v~Fs~~n~ll 708 (711)
.+..+... ..+.+++|+++|.+|
T Consensus 306 ----~~~~~~~~-~~~~~~~~s~dg~~l 328 (353)
T 3vgz_A 306 ----VVKTFDTP-THPNSLALSADGKTL 328 (353)
T ss_dssp ----EEEEEECC-SEEEEEEECTTSCEE
T ss_pred ----EEEEEecC-CCCCeEEEcCCCCEE
Confidence 12223332 356889999998744
No 136
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.91 E-value=7.4e-23 Score=251.28 Aligned_cols=321 Identities=12% Similarity=0.031 Sum_probs=246.1
Q ss_pred EEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCC--CCceeee---------ccCccccccccccCCcEEEEEecCC
Q psy14440 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLV--PQKLKAM---------KSSDQLQDIEMECDDILVRIMDERN 449 (711)
Q Consensus 381 ~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~--~~~~~~~---------~~~~~~~~l~~~~~d~~i~i~d~~~ 449 (711)
..+.+|...+.++.|+++ .++++++.++.++||.+. +.....+ ..++++..++.. .++.+++|+...
T Consensus 197 ~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~-~~~~i~~~d~~~ 274 (1045)
T 1k32_A 197 KKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFS-KGGSIYIFNPDT 274 (1045)
T ss_dssp EEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEE-ETTEEEEECTTT
T ss_pred EECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEE-eCCEEEEecCCc
Confidence 445789999999999998 777888889999999764 3332222 233445555554 478899999844
Q ss_pred CeeEEEeec-----------ccCCEEEEEEc-CCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCC-CEEEEEEcCCCCE
Q psy14440 450 AETTRTLVG-----------HEGPVRKLSFS-PDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGH-PVWDIKFSPHGYY 516 (711)
Q Consensus 450 ~~~~~~l~~-----------h~~~V~~l~fs-pdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~-~V~~v~~sp~g~~ 516 (711)
.. +..+.+ |.+.|.+++|+ |||++|++++ ++.|.+|++.++.... +..|.. .+.+++|+ +|+.
T Consensus 275 ~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~s-dg~~ 350 (1045)
T 1k32_A 275 EK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGD-TKVA 350 (1045)
T ss_dssp CC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-CSCCSCEEEEEECSS-SEEE
T ss_pred eE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-ccCCCcceEEeeeEc-CCCe
Confidence 43 335555 44578999999 9999999988 7899999998876544 556777 89999999 9999
Q ss_pred EEEEECCCeEE-EEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEe
Q psy14440 517 FASAGHDRMAR-LWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFS 595 (711)
Q Consensus 517 l~sgs~Dg~i~-lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~s 595 (711)
|++++.++.+. +|+..+++..... +|...+.+++|+|+|++|++++.++.|++||+.+++....+.+|.+.+.+++||
T Consensus 351 l~~~s~~~~l~~~~d~~~~~~~~l~-~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~S 429 (1045)
T 1k32_A 351 FIHGTREGDFLGIYDYRTGKAEKFE-ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTIS 429 (1045)
T ss_dssp EEEEETTEEEEEEEETTTCCEEECC-CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEEC
T ss_pred EEEEECCCceEEEEECCCCCceEec-CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEEC
Confidence 99999988898 9999887655444 888899999999999999999999999999999999888887899999999999
Q ss_pred cCCCEEEEEeCCC----------cEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCCccC
Q psy14440 596 VCGRFLASAGGDG----------NVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVG 665 (711)
Q Consensus 596 pdg~~Lasgs~Dg----------~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~~~ 665 (711)
|||++|++++.++ .|++||+.+++ +..+..|...+.+++|++||++|++++.++..++|+.....-...
T Consensus 430 pDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~ 508 (1045)
T 1k32_A 430 DNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFE 508 (1045)
T ss_dssp TTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECC
T ss_pred CCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccc
Confidence 9999999887654 89999999988 677888888899999999999999999999999998764321110
Q ss_pred cc-cc-----ccc-ccc-------------ccccccccceeeecccCCcceEEEEEccCCeeee
Q psy14440 666 TE-EV-----NLS-HSA-------------DIKNSSLAYLVRSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 666 ~~-~~-----~~~-~~~-------------~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
.. .. ... ... .+........+..+..+...+..++|++++.+++
T Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~ 572 (1045)
T 1k32_A 509 VVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIY 572 (1045)
T ss_dssp SCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEE
T ss_pred cCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEE
Confidence 00 00 000 000 0111111223445666777899999999998554
No 137
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.91 E-value=1.7e-22 Score=222.66 Aligned_cols=224 Identities=16% Similarity=0.105 Sum_probs=185.3
Q ss_pred EEEEecCCCceEEEEECCCCCEEEEEeCCC---eEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEe
Q psy14440 380 CYTLLNARQQVTCAEISEDVSILAVGFSES---YIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTL 456 (711)
Q Consensus 380 ~~tl~~h~~~V~~l~fs~dg~~LatG~~dg---~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l 456 (711)
...+.+|...|.+++|||||++||+++.++ .|++||+.+++ . ..+
T Consensus 171 ~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~-------------------------------~-~~l 218 (415)
T 2hqs_A 171 QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA-------------------------------V-RQV 218 (415)
T ss_dssp CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC-------------------------------E-EEE
T ss_pred CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc-------------------------------E-EEe
Confidence 456778899999999999999999999875 88888875432 2 245
Q ss_pred ecccCCEEEEEEcCCCCEEE-EEeCCCe--EEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEEC-CC--eEEEEE
Q psy14440 457 VGHEGPVRKLSFSPDRSLLL-SCSQDNT--IRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGH-DR--MARLWA 530 (711)
Q Consensus 457 ~~h~~~V~~l~fspdg~~L~-s~s~Dg~--V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~-Dg--~i~lwd 530 (711)
..|.+.+.+++|+|||++|+ +++.|+. |++||+.+++. ..+..|...+.+++|+|+|++|++++. ++ .|++||
T Consensus 219 ~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d 297 (415)
T 2hqs_A 219 ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVN 297 (415)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred ecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEE
Confidence 56788999999999999888 6666654 99999998776 566678889999999999999998886 44 688889
Q ss_pred CCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcC---CcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCC
Q psy14440 531 TDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSD---RTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGD 607 (711)
Q Consensus 531 ~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~D---g~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~D 607 (711)
+.+++. ..+..+...+.+++|+|+|++|++++.+ +.|++||+.+++.. .+..+. .+.+++|+|||++|++++.+
T Consensus 298 ~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~s~~ 374 (415)
T 2hqs_A 298 INGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYSSSQ 374 (415)
T ss_dssp TTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEEEEE
T ss_pred CCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEEEcC
Confidence 988764 4455677789999999999999988864 58999999998864 555554 89999999999999998877
Q ss_pred C---cEEEEECCCCeEEEEeeCCCCCEEEEEEeCCC
Q psy14440 608 G---NVHMWDLSNGHLLTLLTGHTDVVRALCFSRDG 640 (711)
Q Consensus 608 g---~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg 640 (711)
+ .|++||+. ++....+.+|.+.|.+++|+|.-
T Consensus 375 ~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 375 GMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp TTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCC
T ss_pred CCccEEEEEECC-CCcEEEeeCCCCCCcCCcccccc
Confidence 7 79999986 56677889999999999999864
No 138
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.91 E-value=7.8e-24 Score=248.87 Aligned_cols=268 Identities=14% Similarity=0.096 Sum_probs=201.3
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEeCCCCce--------------eeeccCccccccccccC---------CcEEEEE
Q psy14440 389 QVTCAEISEDVSILAVGFSESYIKLWSLVPQKL--------------KAMKSSDQLQDIEMECD---------DILVRIM 445 (711)
Q Consensus 389 ~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~--------------~~~~~~~~~~~l~~~~~---------d~~i~i~ 445 (711)
.+.+++||+||+++++ +.||.|++||+.+++. ..+..++++..++.+.. ++.+++|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 4668899999998876 6899999999876543 23345566666666554 3788899
Q ss_pred ecCCCeeEEEee---cccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCE-----------------
Q psy14440 446 DERNAETTRTLV---GHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPV----------------- 505 (711)
Q Consensus 446 d~~~~~~~~~l~---~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V----------------- 505 (711)
|..+++. +.+. +|...+.+++|||||+.|++++. ++|++||+.+++.......+...+
T Consensus 97 d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~ 174 (723)
T 1xfd_A 97 KIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKT 174 (723)
T ss_dssp ESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSS
T ss_pred ECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccC
Confidence 9988775 3443 44455899999999999999886 789999999988877666544433
Q ss_pred -EEEEEcCCCCEEEEEECCC----------------------------------eEEEEECCCCceeEEeecC------C
Q psy14440 506 -WDIKFSPHGYYFASAGHDR----------------------------------MARLWATDSYHPLRLFVGH------Y 544 (711)
Q Consensus 506 -~~v~~sp~g~~l~sgs~Dg----------------------------------~i~lwd~~~~~~~~~~~~h------~ 544 (711)
.+++|+|+|++|++++.|+ +|++||+.+++....+..+ .
T Consensus 175 ~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~ 254 (723)
T 1xfd_A 175 HIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMRE 254 (723)
T ss_dssp SEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSS
T ss_pred cceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCcc
Confidence 7899999999999988653 7999999988765666554 5
Q ss_pred CCeeEEEEcCCCCEEEEEEcC----CcEEEEECCCCcEEEEeeC-CCCCeE----EEEEecCCCEEEE--EeCCC-----
Q psy14440 545 SDVDCVQFHPNSNYVATGSSD----RTIRLWDCVTGSHVRLLTG-HKAPVY----ALSFSVCGRFLAS--AGGDG----- 608 (711)
Q Consensus 545 ~~V~~v~~sp~~~~latgs~D----g~I~iwD~~~~~~v~~~~~-h~~~I~----~la~spdg~~Las--gs~Dg----- 608 (711)
..+.+++|+|||++|++.+.. ..|++||+.++++...+.. +.+.+. +++|||||++|+. +..+|
T Consensus 255 ~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~ 334 (723)
T 1xfd_A 255 YYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKF 334 (723)
T ss_dssp EEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCE
T ss_pred ceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcce
Confidence 678999999999998777543 5799999999988777654 334443 7899999997775 45666
Q ss_pred -cEEEEE-CCCCe--EEEEeeCCCCCEEE-EEEeCCCCEEEEEeCC---CcEEEEeCCC
Q psy14440 609 -NVHMWD-LSNGH--LLTLLTGHTDVVRA-LCFSRDGNILASSGQD---CSVKLWDFAK 659 (711)
Q Consensus 609 -~I~iwD-l~sg~--~i~~l~~h~~~V~s-l~fspdg~~Lasgs~D---g~V~iWdl~~ 659 (711)
.|.+|| ..+++ +...+..+...+.. ++|++||+.|+..+.+ +.++||++..
T Consensus 335 ~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 335 YHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp EEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECS
T ss_pred eEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeC
Confidence 577788 44444 14445433344544 6999999999876665 7899999864
No 139
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.91 E-value=5e-22 Score=209.94 Aligned_cols=246 Identities=15% Similarity=0.188 Sum_probs=183.5
Q ss_pred EEEecCCCceEEEEECCCCCEEEEEeCC-CeEEEEeCC--CCceeeeccCccccccccccCCcEEEEEecCCCeeEEEee
Q psy14440 381 YTLLNARQQVTCAEISEDVSILAVGFSE-SYIKLWSLV--PQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLV 457 (711)
Q Consensus 381 ~tl~~h~~~V~~l~fs~dg~~LatG~~d-g~I~vWdl~--~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~ 457 (711)
.....|...+.+++|+++|++|++++.+ +.|++|++. ++.+ ..+..+.
T Consensus 31 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~-----------------------------~~~~~~~ 81 (343)
T 1ri6_A 31 TQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGAL-----------------------------TFAAESA 81 (343)
T ss_dssp EEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCE-----------------------------EEEEEEE
T ss_pred eeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCce-----------------------------eeccccc
Confidence 3345677889999999999999888886 899999985 2221 1222333
Q ss_pred cccCCEEEEEEcCCCCEEEEEeC-CCeEEEEEC---CCCeEEEEEecCCCCEEEEEEcCCCCEEEEEE-CCCeEEEEECC
Q psy14440 458 GHEGPVRKLSFSPDRSLLLSCSQ-DNTIRLWSL---LLWRCLVVYKGHGHPVWDIKFSPHGYYFASAG-HDRMARLWATD 532 (711)
Q Consensus 458 ~h~~~V~~l~fspdg~~L~s~s~-Dg~V~iwdl---~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs-~Dg~i~lwd~~ 532 (711)
.+. .+.+++|++++++|++++. ++.|.+||+ .+.+.+..+.. ...+.+++|+|+|+++++++ .++.|++||+.
T Consensus 82 ~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 159 (343)
T 1ri6_A 82 LPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVS 159 (343)
T ss_dssp CSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred cCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEec
Confidence 333 7789999999998877765 889999999 44455555554 34588999999999888887 89999999998
Q ss_pred C-CceeE----Eeec-CCCCeeEEEEcCCCCEEEEEE-cCCcEEEEECCC--CcE--EEEee----CC--CCCeEEEEEe
Q psy14440 533 S-YHPLR----LFVG-HYSDVDCVQFHPNSNYVATGS-SDRTIRLWDCVT--GSH--VRLLT----GH--KAPVYALSFS 595 (711)
Q Consensus 533 ~-~~~~~----~~~~-h~~~V~~v~~sp~~~~latgs-~Dg~I~iwD~~~--~~~--v~~~~----~h--~~~I~~la~s 595 (711)
+ ++... .+.. ....+.+++|+|+++++++++ .++.|++||+.. ++. ...+. ++ ...+.+++|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s 239 (343)
T 1ri6_A 160 DDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHIT 239 (343)
T ss_dssp TTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEEC
T ss_pred CCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEEC
Confidence 7 54432 2222 345788999999999876665 789999999953 432 22222 11 2357789999
Q ss_pred cCCCEEEEE-eCCCcEEEEECC--C--CeEEEEeeCCCCCEEEEEEeCCCCEEEEEe-CCCcEEEEeCC
Q psy14440 596 VCGRFLASA-GGDGNVHMWDLS--N--GHLLTLLTGHTDVVRALCFSRDGNILASSG-QDCSVKLWDFA 658 (711)
Q Consensus 596 pdg~~Lasg-s~Dg~I~iwDl~--s--g~~i~~l~~h~~~V~sl~fspdg~~Lasgs-~Dg~V~iWdl~ 658 (711)
++|++|+++ ..++.|.+||+. + .+.+..+..+.. +.+++|+++|++|++++ .++.|.+|++.
T Consensus 240 ~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 240 PDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp TTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred CCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 999988754 478999999998 3 345556665554 88999999999888887 68999999765
No 140
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.91 E-value=5.8e-23 Score=211.36 Aligned_cols=237 Identities=16% Similarity=0.154 Sum_probs=185.6
Q ss_pred EEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCC-CceeeeccCccccccccccCCcEEEEEecCCCeeEEEeec
Q psy14440 380 CYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVP-QKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVG 458 (711)
Q Consensus 380 ~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~-~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~ 458 (711)
...+..|...|.+++|+|||++|++++ ++.|++|++.+ .+.. ....+
T Consensus 34 ~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~-------------------------------~~~~~ 81 (297)
T 2ojh_A 34 MRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPE-------------------------------KVDTG 81 (297)
T ss_dssp EEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCE-------------------------------ECCCT
T ss_pred eeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCce-------------------------------Eeccc
Confidence 345667889999999999999999987 78999999865 4322 22223
Q ss_pred c-cCCEEEEEEcCCCCEEEEEe--CCCeEEEE--ECCCCeEEEEEecCCCCEEEEEEcCCCCEEE-EEECCCeEEEEECC
Q psy14440 459 H-EGPVRKLSFSPDRSLLLSCS--QDNTIRLW--SLLLWRCLVVYKGHGHPVWDIKFSPHGYYFA-SAGHDRMARLWATD 532 (711)
Q Consensus 459 h-~~~V~~l~fspdg~~L~s~s--~Dg~V~iw--dl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~-sgs~Dg~i~lwd~~ 532 (711)
| ...|.+++|+|++++|++++ .++.+.|| ++.++. ...+.. ...+.+++|+|++++++ +++.++.+++|+++
T Consensus 82 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~ 159 (297)
T 2ojh_A 82 FATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTK-NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMD 159 (297)
T ss_dssp TCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCS-SSSEEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred cccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeec-CCCccceEECCCCCEEEEEECCCCceEEEEEE
Confidence 3 36788999999999999998 33445555 555544 333433 33589999999999887 77889999999864
Q ss_pred C-CceeEEeecCCCCeeEEEEcCCCCEEEEEE-cCCcEEEEECC-CCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCC--
Q psy14440 533 S-YHPLRLFVGHYSDVDCVQFHPNSNYVATGS-SDRTIRLWDCV-TGSHVRLLTGHKAPVYALSFSVCGRFLASAGGD-- 607 (711)
Q Consensus 533 ~-~~~~~~~~~h~~~V~~v~~sp~~~~latgs-~Dg~I~iwD~~-~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~D-- 607 (711)
. ......+..+...+.+++|+|++++|++++ .++.+++|++. .+..+..+..|...+.+++|+|+|++|++++.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 239 (297)
T 2ojh_A 160 IDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDAD 239 (297)
T ss_dssp TTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETT
T ss_pred CCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCC
Confidence 2 234556667888999999999999988777 48999999986 566778888888899999999999999988765
Q ss_pred ---------CcEEEEECCCCeE--EEEeeCCCCCEEEEEEeCCCCEEEEEeCCC
Q psy14440 608 ---------GNVHMWDLSNGHL--LTLLTGHTDVVRALCFSRDGNILASSGQDC 650 (711)
Q Consensus 608 ---------g~I~iwDl~sg~~--i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg 650 (711)
+.|++||+.+++. +..+.+|...+.+++|+++|++|++++.|.
T Consensus 240 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 240 VFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp CCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 5699999988865 445557888899999999999998887664
No 141
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.91 E-value=1.1e-22 Score=249.65 Aligned_cols=299 Identities=11% Similarity=0.044 Sum_probs=226.0
Q ss_pred EEEEecCCCce-------EEEEECCCCCEEEEEeCC------CeEEEEeCCCCceeeeccCc------------------
Q psy14440 380 CYTLLNARQQV-------TCAEISEDVSILAVGFSE------SYIKLWSLVPQKLKAMKSSD------------------ 428 (711)
Q Consensus 380 ~~tl~~h~~~V-------~~l~fs~dg~~LatG~~d------g~I~vWdl~~~~~~~~~~~~------------------ 428 (711)
...+..|...+ .+++|||||+++++++.+ ..|.+|++.++....+....
T Consensus 92 ~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~ 171 (1045)
T 1k32_A 92 IKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTF 171 (1045)
T ss_dssp EEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCS
T ss_pred eEEcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCC
Confidence 45567777777 999999999988887754 45778887665543221110
Q ss_pred -----------------------------------------cccccccccCCcEEEEEecCC-CeeEEEeecccCCEEEE
Q psy14440 429 -----------------------------------------QLQDIEMECDDILVRIMDERN-AETTRTLVGHEGPVRKL 466 (711)
Q Consensus 429 -----------------------------------------~~~~l~~~~~d~~i~i~d~~~-~~~~~~l~~h~~~V~~l 466 (711)
....+..+..++.+.+|.... +...+.+..|. .+.++
T Consensus 172 ~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~ 250 (1045)
T 1k32_A 172 ELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPR 250 (1045)
T ss_dssp CCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEE
T ss_pred CccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCC-Cccee
Confidence 001112233345556665432 33445566565 46778
Q ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEec-----------CCCCEEEEEEc-CCCCEEEEEECCCeEEEEECCCC
Q psy14440 467 SFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKG-----------HGHPVWDIKFS-PHGYYFASAGHDRMARLWATDSY 534 (711)
Q Consensus 467 ~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~-----------h~~~V~~v~~s-p~g~~l~sgs~Dg~i~lwd~~~~ 534 (711)
+|+|||++|++++ ++.|++|++.... +..+.+ |...+.+++|+ |+|+++++++ ++.+++|+...+
T Consensus 251 ~~SpDG~~la~~~-~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~ 327 (1045)
T 1k32_A 251 HLNTDGRRILFSK-GGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGT 327 (1045)
T ss_dssp EEEESSSCEEEEE-TTEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSS
T ss_pred eEcCCCCEEEEEe-CCEEEEecCCceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCC
Confidence 9999999998874 8999999995443 335444 33468999999 9999999888 889999999877
Q ss_pred ceeEEeecCCC-CeeEEEEcCCCCEEEEEEcCCcEE-EEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy14440 535 HPLRLFVGHYS-DVDCVQFHPNSNYVATGSSDRTIR-LWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHM 612 (711)
Q Consensus 535 ~~~~~~~~h~~-~V~~v~~sp~~~~latgs~Dg~I~-iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~i 612 (711)
.... +..|.. .+.+++|+ +|+.|++++.++.+. +||+.+++... +.+|...+.+++|||||++|++++.++.|++
T Consensus 328 ~~~~-~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~ 404 (1045)
T 1k32_A 328 YVLK-VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMT 404 (1045)
T ss_dssp BEEE-CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEE
T ss_pred ceEE-ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEE
Confidence 6544 566777 89999999 999999999888898 99998877544 4488889999999999999999999999999
Q ss_pred EECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCC----------cEEEEeCCCCCCccCccccccccccccccccc
Q psy14440 613 WDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDC----------SVKLWDFAKLSDEVGTEEVNLSHSADIKNSSL 682 (711)
Q Consensus 613 wDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg----------~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (711)
||+.+++....+.+|.+.+.+++|||||++|++++.++ .|++||+....
T Consensus 405 ~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~--------------------- 463 (1045)
T 1k32_A 405 VDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK--------------------- 463 (1045)
T ss_dssp EETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE---------------------
T ss_pred EECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc---------------------
Confidence 99999998888888999999999999999999887754 89999986421
Q ss_pred cceeeecccCCcceEEEEEccCCeeee
Q psy14440 683 AYLVRSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 683 ~~~l~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
+..+..+...+.+++|+++|..|+
T Consensus 464 ---~~~l~~~~~~~~~~~~spdG~~l~ 487 (1045)
T 1k32_A 464 ---IFAATTENSHDYAPAFDADSKNLY 487 (1045)
T ss_dssp ---EEECSCSSSBEEEEEECTTSCEEE
T ss_pred ---EEEeeCCCcccCCceEcCCCCEEE
Confidence 122334455677788888888765
No 142
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.90 E-value=1.6e-21 Score=206.06 Aligned_cols=264 Identities=11% Similarity=0.107 Sum_probs=195.6
Q ss_pred EECCCCC-EEEEEeCCCeEEEEeCCCCceee----------eccCccccccccc-cCCcEEEEEecCCCee-EEEeeccc
Q psy14440 394 EISEDVS-ILAVGFSESYIKLWSLVPQKLKA----------MKSSDQLQDIEME-CDDILVRIMDERNAET-TRTLVGHE 460 (711)
Q Consensus 394 ~fs~dg~-~LatG~~dg~I~vWdl~~~~~~~----------~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~-~~~l~~h~ 460 (711)
.|..+++ +++++..++.|++||+.++++.. +..+++...+.+. ..++.+.+||..+++. ...+..+.
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 83 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFVDTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQ 83 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEEEEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECS
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcceEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCC
Confidence 4555554 46778888999999998766432 2233344434333 3477899999988887 77777777
Q ss_pred CCEEEEEEcCCCCEEEEEeCCC---eEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEE-EEECCCe-EEEEECCCCc
Q psy14440 461 GPVRKLSFSPDRSLLLSCSQDN---TIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFA-SAGHDRM-ARLWATDSYH 535 (711)
Q Consensus 461 ~~V~~l~fspdg~~L~s~s~Dg---~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~-sgs~Dg~-i~lwd~~~~~ 535 (711)
.++.+++|+++|++|+++..++ .|.+||+.+++.+..+.. .....+++|+|+|++++ ++..++. +.+|+++...
T Consensus 84 ~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g 162 (331)
T 3u4y_A 84 SSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADG 162 (331)
T ss_dssp SCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTC
T ss_pred CCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCC
Confidence 7776699999999999655553 899999999999888775 44568999999998554 4456688 9999988644
Q ss_pred ee----EEeecCCCCeeEEEEcCCCCEEEEEE-cCCcEEEEECCCCcE---EEEeeCCCCCeEEEEEecCCCEEEEEe-C
Q psy14440 536 PL----RLFVGHYSDVDCVQFHPNSNYVATGS-SDRTIRLWDCVTGSH---VRLLTGHKAPVYALSFSVCGRFLASAG-G 606 (711)
Q Consensus 536 ~~----~~~~~h~~~V~~v~~sp~~~~latgs-~Dg~I~iwD~~~~~~---v~~~~~h~~~I~~la~spdg~~Lasgs-~ 606 (711)
.+ ...........+++|+|+|+++++++ .++.|++||+.+++. +..+.. ...+.+++|+|||++|++++ .
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~ 241 (331)
T 3u4y_A 163 VLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTES 241 (331)
T ss_dssp CEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-SSCCCCEEECTTSSEEEEECSS
T ss_pred cEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC-CCCCceEEECCCCCEEEEEEcC
Confidence 33 12223455689999999999766655 588999999999988 777764 36678999999999877665 5
Q ss_pred CCcEEEEECCCCeE--EEEeeCC----C---CCEEEEEEeCCCCEEEEEeC-CCcEEEEeCCC
Q psy14440 607 DGNVHMWDLSNGHL--LTLLTGH----T---DVVRALCFSRDGNILASSGQ-DCSVKLWDFAK 659 (711)
Q Consensus 607 Dg~I~iwDl~sg~~--i~~l~~h----~---~~V~sl~fspdg~~Lasgs~-Dg~V~iWdl~~ 659 (711)
++.|.+||+.+++. +..+..+ . .....++|++||++|++++. ++.|++||+..
T Consensus 242 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 242 TVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISG 304 (331)
T ss_dssp EEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred CCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecC
Confidence 78899999999987 5444433 2 12356899999998866554 66999999975
No 143
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.89 E-value=2.2e-21 Score=204.93 Aligned_cols=200 Identities=14% Similarity=0.198 Sum_probs=152.2
Q ss_pred cccCCEEEEEEcCCCCEEEEEeCC-CeEEEEECC--CCe--EEEEEecCCCCEEEEEEcCCCCEEEEEEC-CCeEEEEEC
Q psy14440 458 GHEGPVRKLSFSPDRSLLLSCSQD-NTIRLWSLL--LWR--CLVVYKGHGHPVWDIKFSPHGYYFASAGH-DRMARLWAT 531 (711)
Q Consensus 458 ~h~~~V~~l~fspdg~~L~s~s~D-g~V~iwdl~--t~~--~~~~~~~h~~~V~~v~~sp~g~~l~sgs~-Dg~i~lwd~ 531 (711)
.|...+.+++|+|++++|++++.+ +.|++|++. +++ .+..+..+. .+.+++|+++|+++++++. ++.|.+||+
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~ 113 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRL 113 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEEC
Confidence 466788999999999999998886 999999997 444 444555444 7889999999998877765 889999999
Q ss_pred C---CCceeEEeecCCCCeeEEEEcCCCCEEEEEE-cCCcEEEEECCC-CcEEE----EeeC-CCCCeEEEEEecCCCEE
Q psy14440 532 D---SYHPLRLFVGHYSDVDCVQFHPNSNYVATGS-SDRTIRLWDCVT-GSHVR----LLTG-HKAPVYALSFSVCGRFL 601 (711)
Q Consensus 532 ~---~~~~~~~~~~h~~~V~~v~~sp~~~~latgs-~Dg~I~iwD~~~-~~~v~----~~~~-h~~~I~~la~spdg~~L 601 (711)
+ ..+.+..+.. ...+.+++|+|+++++++++ .++.|++||+.+ ++... .+.. ....+.+++|+|+|++|
T Consensus 114 ~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l 192 (343)
T 1ri6_A 114 EDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYA 192 (343)
T ss_dssp ETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEE
T ss_pred CCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEE
Confidence 4 3344444443 34689999999999988888 899999999987 65432 2232 34578899999999977
Q ss_pred EEEe-CCCcEEEEECC--CCeE--EEEee----CC--CCCEEEEEEeCCCCEEEE-EeCCCcEEEEeCCC
Q psy14440 602 ASAG-GDGNVHMWDLS--NGHL--LTLLT----GH--TDVVRALCFSRDGNILAS-SGQDCSVKLWDFAK 659 (711)
Q Consensus 602 asgs-~Dg~I~iwDl~--sg~~--i~~l~----~h--~~~V~sl~fspdg~~Las-gs~Dg~V~iWdl~~ 659 (711)
++++ .++.|.+||+. +++. ...+. ++ ...+.+++|+++|++|++ ++.++.|++||+..
T Consensus 193 ~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~ 262 (343)
T 1ri6_A 193 YCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSE 262 (343)
T ss_dssp EEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred EEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcC
Confidence 6555 78999999995 3433 33332 11 235778999999988774 44799999999873
No 144
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.89 E-value=5.3e-22 Score=232.85 Aligned_cols=262 Identities=16% Similarity=0.141 Sum_probs=193.7
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEeCCCCce--ee---------------------------eccCccccccccccCCc
Q psy14440 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQKL--KA---------------------------MKSSDQLQDIEMECDDI 440 (711)
Q Consensus 390 V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~--~~---------------------------~~~~~~~~~l~~~~~d~ 440 (711)
+..+.|+ |+.+++++.++ | +||+.+++. .. +..+++ ..++.. .++
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~~~ 101 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-TQG 101 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-ETT
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-ECC
Confidence 4456777 56677777777 8 999877655 22 223334 333333 358
Q ss_pred EEEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCC-----CeEEEEEecCCCC-----------
Q psy14440 441 LVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLL-----WRCLVVYKGHGHP----------- 504 (711)
Q Consensus 441 ~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t-----~~~~~~~~~h~~~----------- 504 (711)
.+++||..+++. ..+..+.+.+.+++|||||++|+++ .|++|++||+.+ ++.......+...
T Consensus 102 ~i~~~d~~~~~~-~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee 179 (706)
T 2z3z_A 102 GLVGFDMLARKV-TYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQRE 179 (706)
T ss_dssp EEEEEETTTTEE-EEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGC
T ss_pred EEEEEECCCCce-EEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhh
Confidence 899999887765 4455677889999999999999985 679999999998 7766554444333
Q ss_pred ---EEEEEEcCCCCEEEEEE---------------------------------CCCeEEEEECCCCceeEEee--cCCCC
Q psy14440 505 ---VWDIKFSPHGYYFASAG---------------------------------HDRMARLWATDSYHPLRLFV--GHYSD 546 (711)
Q Consensus 505 ---V~~v~~sp~g~~l~sgs---------------------------------~Dg~i~lwd~~~~~~~~~~~--~h~~~ 546 (711)
+.++.|+|+|++|++++ .+..|++||+.+++...... .|...
T Consensus 180 ~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 259 (706)
T 2z3z_A 180 FGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKF 259 (706)
T ss_dssp TTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCE
T ss_pred cCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCcee
Confidence 47899999999999998 45789999999887655443 46677
Q ss_pred eeEEEEcCCCCEEEEEEcCC-----cEEEEECCCCcEEEEee--CCCC---CeEEEEEec--CCCEEEEEeCCCcEEEEE
Q psy14440 547 VDCVQFHPNSNYVATGSSDR-----TIRLWDCVTGSHVRLLT--GHKA---PVYALSFSV--CGRFLASAGGDGNVHMWD 614 (711)
Q Consensus 547 V~~v~~sp~~~~latgs~Dg-----~I~iwD~~~~~~v~~~~--~h~~---~I~~la~sp--dg~~Lasgs~Dg~I~iwD 614 (711)
+.+++|+|||++|++++.++ .|++||+.+++..+.+. .+.. .+.+++|+| ||++|++++.||.++||+
T Consensus 260 ~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~ 339 (706)
T 2z3z_A 260 LTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYL 339 (706)
T ss_dssp EEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEE
T ss_pred EeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEE
Confidence 99999999999999988776 89999999994444332 2222 246789999 999999999999999998
Q ss_pred CC-CCeEEEEeeCCCCCEEE-EEEeCCCCEEEEEeCC-C----cEEEEeCCC
Q psy14440 615 LS-NGHLLTLLTGHTDVVRA-LCFSRDGNILASSGQD-C----SVKLWDFAK 659 (711)
Q Consensus 615 l~-sg~~i~~l~~h~~~V~s-l~fspdg~~Lasgs~D-g----~V~iWdl~~ 659 (711)
+. +++.+..+..|...+.+ ++|+++|+.|+.++.+ + .|..||+..
T Consensus 340 ~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 391 (706)
T 2z3z_A 340 YDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKG 391 (706)
T ss_dssp EETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTC
T ss_pred EECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCC
Confidence 76 67778888888877877 7999999987766554 3 455556543
No 145
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.89 E-value=1.8e-21 Score=228.36 Aligned_cols=269 Identities=14% Similarity=0.118 Sum_probs=207.1
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceee----------eccCccccccccccCCcEEEEEecCC-----Cee
Q psy14440 388 QQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKA----------MKSSDQLQDIEMECDDILVRIMDERN-----AET 452 (711)
Q Consensus 388 ~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~----------~~~~~~~~~l~~~~~d~~i~i~d~~~-----~~~ 452 (711)
..|.+++||+| +.++.+. ++.|++||+.+++... +.+++++..++. ..++.|++|+..+ ++.
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~-~~~~~i~v~~~~~~~~~~g~~ 158 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAY-VRNHNLYIARGGKLGEGMSRA 158 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEE-EETTEEEEEECBCTTSCCCCC
T ss_pred cCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEE-EECCeEEEEecCcccccCCCc
Confidence 57999999999 6666554 5999999998766443 234455666666 4678999999988 766
Q ss_pred EEEeecccCC--------------EEEEEEcCCCCEEEEEe---------------------------------CCCeEE
Q psy14440 453 TRTLVGHEGP--------------VRKLSFSPDRSLLLSCS---------------------------------QDNTIR 485 (711)
Q Consensus 453 ~~~l~~h~~~--------------V~~l~fspdg~~L~s~s---------------------------------~Dg~V~ 485 (711)
......+... +.+++|||||++|++++ .++.|+
T Consensus 159 ~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~ 238 (706)
T 2z3z_A 159 IAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVG 238 (706)
T ss_dssp EESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEE
T ss_pred EEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEE
Confidence 6555544443 48999999999999987 446799
Q ss_pred EEECCCCeEEEEEe--cCCCCEEEEEEcCCCCEEEEEECCC-----eEEEEECCCCceeEEee-c-CCC---CeeEEEEc
Q psy14440 486 LWSLLLWRCLVVYK--GHGHPVWDIKFSPHGYYFASAGHDR-----MARLWATDSYHPLRLFV-G-HYS---DVDCVQFH 553 (711)
Q Consensus 486 iwdl~t~~~~~~~~--~h~~~V~~v~~sp~g~~l~sgs~Dg-----~i~lwd~~~~~~~~~~~-~-h~~---~V~~v~~s 553 (711)
+||+.+++...... .|...+.+++|+|+|++|++++.++ .|++||+.+++..+.+. . +.. .+.+++|+
T Consensus 239 ~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~s 318 (706)
T 2z3z_A 239 IYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFL 318 (706)
T ss_dssp EEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEEC
T ss_pred EEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceee
Confidence 99999988765543 4667899999999999999988776 99999999984444332 2 222 24678999
Q ss_pred C--CCCEEEEEEcCCcEEEEECC-CCcEEEEeeCCCCCeEE-EEEecCCCEEEEEeC-CC----cEEEEECCCCeEEEEe
Q psy14440 554 P--NSNYVATGSSDRTIRLWDCV-TGSHVRLLTGHKAPVYA-LSFSVCGRFLASAGG-DG----NVHMWDLSNGHLLTLL 624 (711)
Q Consensus 554 p--~~~~latgs~Dg~I~iwD~~-~~~~v~~~~~h~~~I~~-la~spdg~~Lasgs~-Dg----~I~iwDl~sg~~i~~l 624 (711)
| +|+++++++.|+.++||++. ++..++.+..|...+.+ ++|+++|+.|+.++. ++ .|..||+.+++ ...+
T Consensus 319 p~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l 397 (706)
T 2z3z_A 319 PGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDL 397 (706)
T ss_dssp TTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEES
T ss_pred cCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceec
Confidence 9 99999999999999999886 67778888888888887 799999998876554 43 67778887776 3344
Q ss_pred eCCCCCEEEEEEeCCCCEEEEEeCC----CcEEEEeCCCCC
Q psy14440 625 TGHTDVVRALCFSRDGNILASSGQD----CSVKLWDFAKLS 661 (711)
Q Consensus 625 ~~h~~~V~sl~fspdg~~Lasgs~D----g~V~iWdl~~~~ 661 (711)
. |...+.+++|++||++|+.++.+ +.|++||+....
T Consensus 398 ~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 398 T-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp C-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred c-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 3 66779999999999988876544 569999987643
No 146
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.89 E-value=7.3e-22 Score=232.87 Aligned_cols=235 Identities=15% Similarity=0.084 Sum_probs=191.1
Q ss_pred eeeeccCccccccccccC-Cc-----EEEEEecCCCeeEEEeecccCC------------------------EEEEEEcC
Q psy14440 421 LKAMKSSDQLQDIEMECD-DI-----LVRIMDERNAETTRTLVGHEGP------------------------VRKLSFSP 470 (711)
Q Consensus 421 ~~~~~~~~~~~~l~~~~~-d~-----~i~i~d~~~~~~~~~l~~h~~~------------------------V~~l~fsp 470 (711)
+..+.+++++..++..+. ++ .|++||..+++....+..|... |.+++|||
T Consensus 39 ~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Sp 118 (741)
T 2ecf_A 39 LMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSP 118 (741)
T ss_dssp CEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECT
T ss_pred CCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECC
Confidence 445566677777777666 66 8999999998887777665433 88999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCe--EEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEeecCCCC--
Q psy14440 471 DRSLLLSCSQDNTIRLWSLLLWR--CLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSD-- 546 (711)
Q Consensus 471 dg~~L~s~s~Dg~V~iwdl~t~~--~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~~~-- 546 (711)
||++|++++. ++|++||+.++. ....+..|...+.+++|+|+|++|++++ ++.|++||+.+++..+....+...
T Consensus 119 Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~ 196 (741)
T 2ecf_A 119 DAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIG 196 (741)
T ss_dssp TSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEE
T ss_pred CCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCcccee
Confidence 9999999987 899999998872 3445666788899999999999999988 569999999988776655544432
Q ss_pred --------------eeEEEEcCCCCEEEEEEcCC---------------------------------cEEEEECCC-CcE
Q psy14440 547 --------------VDCVQFHPNSNYVATGSSDR---------------------------------TIRLWDCVT-GSH 578 (711)
Q Consensus 547 --------------V~~v~~sp~~~~latgs~Dg---------------------------------~I~iwD~~~-~~~ 578 (711)
+.+++|+|||++|++++.|+ .|++||+.+ ++.
T Consensus 197 ~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~ 276 (741)
T 2ecf_A 197 NGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQT 276 (741)
T ss_dssp ESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCC
T ss_pred ccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCce
Confidence 47899999999999998765 789999998 876
Q ss_pred EEEee--CCCCCeEEEEEecCCCEEEEEeC-----CCcEEEEECCCCeEEEEeeCCCC----CEEEEEEeCCCCEEEEEe
Q psy14440 579 VRLLT--GHKAPVYALSFSVCGRFLASAGG-----DGNVHMWDLSNGHLLTLLTGHTD----VVRALCFSRDGNILASSG 647 (711)
Q Consensus 579 v~~~~--~h~~~I~~la~spdg~~Lasgs~-----Dg~I~iwDl~sg~~i~~l~~h~~----~V~sl~fspdg~~Lasgs 647 (711)
..... .|...+.+++| |||++|++++. ++.|++||+.+++....+..+.. .+.+++|++||+++++++
T Consensus 277 ~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~ 355 (741)
T 2ecf_A 277 QWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSE 355 (741)
T ss_dssp EEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEEC
T ss_pred EEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEec
Confidence 65543 37788999999 99999997754 56899999999998777766543 456899999999999999
Q ss_pred CCCcEEEEeCC
Q psy14440 648 QDCSVKLWDFA 658 (711)
Q Consensus 648 ~Dg~V~iWdl~ 658 (711)
.||.++||.+.
T Consensus 356 ~~g~~~l~~~~ 366 (741)
T 2ecf_A 356 RTGFQHLYRID 366 (741)
T ss_dssp TTSSCEEEEEC
T ss_pred CCCccEEEEEc
Confidence 99999999875
No 147
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.88 E-value=5.1e-21 Score=201.61 Aligned_cols=255 Identities=10% Similarity=-0.001 Sum_probs=192.9
Q ss_pred CEEEEEeCCCeEEEEeCCCCceee-------------eccCcccccc-ccccCCcEEEEEecCCCeeEEEeec-c----c
Q psy14440 400 SILAVGFSESYIKLWSLVPQKLKA-------------MKSSDQLQDI-EMECDDILVRIMDERNAETTRTLVG-H----E 460 (711)
Q Consensus 400 ~~LatG~~dg~I~vWdl~~~~~~~-------------~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~l~~-h----~ 460 (711)
++|++++.++.|++||+.+.+... +..+.+...+ +....++.|.+||..+++....+.. + .
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 467777788888888876654322 1122233233 3334566788888777777665543 2 2
Q ss_pred CCEEEEEEcCCCCEEEEEe------------CCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEE
Q psy14440 461 GPVRKLSFSPDRSLLLSCS------------QDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARL 528 (711)
Q Consensus 461 ~~V~~l~fspdg~~L~s~s------------~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~l 528 (711)
..+.+++|+++|++|++++ .++.|.+||+.+++.+..+.. ...+.+++|+|+|++++++ ++.|++
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~ 158 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHV 158 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEE
Confidence 2577899999999999886 579999999999998887775 5567889999999988888 689999
Q ss_pred EECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCC------------------------cEEEEECCCCcEE-EEee
Q psy14440 529 WATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR------------------------TIRLWDCVTGSHV-RLLT 583 (711)
Q Consensus 529 wd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg------------------------~I~iwD~~~~~~v-~~~~ 583 (711)
||+.+++.+..+..+.. ...+.|+|++.+++.++.++ .|.+||+.+++.. ..+.
T Consensus 159 ~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~ 237 (337)
T 1pby_B 159 MDPEAGTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVR 237 (337)
T ss_dssp EETTTTEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEE
T ss_pred EECCCCcEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecC
Confidence 99999988777664431 11337889988776554332 4789999998875 2334
Q ss_pred CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCC
Q psy14440 584 GHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLS 661 (711)
Q Consensus 584 ~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~ 661 (711)
.+...+.+++|+++|++|+++ ++.|.+||+.+++.+..+..+ ..+.+++|+++|++|++++.++.|++||+.+..
T Consensus 238 ~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 238 IMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp ECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEETTTCC
T ss_pred CCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEECcCCc
Confidence 566788999999999999988 689999999999988887744 457899999999999999999999999997643
No 148
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.88 E-value=8.9e-21 Score=200.33 Aligned_cols=225 Identities=13% Similarity=0.086 Sum_probs=179.2
Q ss_pred cccccCCcEEEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeC-CCeEEEEECCCCeE-EEEEecCCCCEEEEEE
Q psy14440 433 IEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQ-DNTIRLWSLLLWRC-LVVYKGHGHPVWDIKF 510 (711)
Q Consensus 433 l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~-Dg~V~iwdl~t~~~-~~~~~~h~~~V~~v~~ 510 (711)
++....++.|.+||..+++....+..+...+ +++|+++|++|++++. ++.|.+||+.+++. ...+..+..+..+++|
T Consensus 13 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 91 (331)
T 3u4y_A 13 IVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDI 91 (331)
T ss_dssp EEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEE
T ss_pred EEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEE
Confidence 4556678899999999999888887777777 9999999997777666 88999999999887 7777777777766999
Q ss_pred cCCCCEEEEEECCC---eEEEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEE-EcCCc-EEEEECCCCcEE----EE
Q psy14440 511 SPHGYYFASAGHDR---MARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATG-SSDRT-IRLWDCVTGSHV----RL 581 (711)
Q Consensus 511 sp~g~~l~sgs~Dg---~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latg-s~Dg~-I~iwD~~~~~~v----~~ 581 (711)
+|+|++++++..++ .|++||+.+++.+..+.. .....+++|+|+|++++++ ..++. |.+|++.....+ ..
T Consensus 92 s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~ 170 (331)
T 3u4y_A 92 TPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQE 170 (331)
T ss_dssp CTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEE
T ss_pred CCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCc
Confidence 99999999655553 899999999988887764 4457899999999866555 55588 999998764433 12
Q ss_pred eeCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCCCeE---EEEeeCCCCCEEEEEEeCCCCEEEEEe-CCCcEEEEe
Q psy14440 582 LTGHKAPVYALSFSVCGRFLASAG-GDGNVHMWDLSNGHL---LTLLTGHTDVVRALCFSRDGNILASSG-QDCSVKLWD 656 (711)
Q Consensus 582 ~~~h~~~I~~la~spdg~~Lasgs-~Dg~I~iwDl~sg~~---i~~l~~h~~~V~sl~fspdg~~Lasgs-~Dg~V~iWd 656 (711)
.........+++|+|+|++|++++ .++.|.+||+.+++. +..+..+ ..+.+++|++||++|++++ .++.|.+||
T Consensus 171 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~i~~~d 249 (331)
T 3u4y_A 171 FISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTESTVDVFNFN 249 (331)
T ss_dssp EECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECSSEEEEEEEE
T ss_pred cccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEECCCCCEEEEEEcCCCEEEEEE
Confidence 223455689999999999766554 688999999999887 7777644 5678999999999776654 578899999
Q ss_pred CCCC
Q psy14440 657 FAKL 660 (711)
Q Consensus 657 l~~~ 660 (711)
+.+.
T Consensus 250 ~~~~ 253 (331)
T 3u4y_A 250 QLSG 253 (331)
T ss_dssp TTTT
T ss_pred CCCC
Confidence 8763
No 149
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=1.5e-21 Score=216.52 Aligned_cols=253 Identities=15% Similarity=0.161 Sum_probs=182.8
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEEEE
Q psy14440 388 QQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLS 467 (711)
Q Consensus 388 ~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~ 467 (711)
..++++++++++.++++|+.++ |+||+...... .... ......+ ..... .....|.+.|++++
T Consensus 37 ~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~--~~~~--------~~~~~~~--~~~~~----~~~~~~~~~v~~l~ 99 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLI--QNKP--------GDDPNKI--VDKVQ----GLLVPMKFPIHHLA 99 (434)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCC--CCCT--------TCCTTCE--EECCC----CEEECCSSCEEEEE
T ss_pred CCccEEEEecCCCEEEEECCCE-EEEEEchHhhh--hccc--------ccCcccc--cccCc----cccccCCCcccEEE
Confidence 4588999999999999999988 99988632110 0000 0000000 00000 11234678899999
Q ss_pred EcCCCCEEE----EEeCCCeEEEEECCCC--------e---EEEEEecCCCCEEEEEEcCC-CCEEEEEECCCeEEEEEC
Q psy14440 468 FSPDRSLLL----SCSQDNTIRLWSLLLW--------R---CLVVYKGHGHPVWDIKFSPH-GYYFASAGHDRMARLWAT 531 (711)
Q Consensus 468 fspdg~~L~----s~s~Dg~V~iwdl~t~--------~---~~~~~~~h~~~V~~v~~sp~-g~~l~sgs~Dg~i~lwd~ 531 (711)
|+++|++|+ +|+.|++|+|||+.++ + .+..+.+|...|++++|+|+ +++|++++.||+|++||+
T Consensus 100 ~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~ 179 (434)
T 2oit_A 100 LSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQV 179 (434)
T ss_dssp ECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEE
T ss_pred EcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEc
Confidence 999999999 7889999999998654 1 24566779999999999997 889999999999999999
Q ss_pred CCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCC-------CCCeEEEEEecCCCEEEEE
Q psy14440 532 DSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH-------KAPVYALSFSVCGRFLASA 604 (711)
Q Consensus 532 ~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h-------~~~I~~la~spdg~~Lasg 604 (711)
+++..+....+|...|.+++|+|+|++|++|+.||+|++||++ ++....+..| ...|.+++|++++.++++.
T Consensus 180 ~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~ 258 (434)
T 2oit_A 180 TETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVY 258 (434)
T ss_dssp SSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEE
T ss_pred CCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEE
Confidence 9987777777889999999999999999999999999999998 6666666544 2379999999999887654
Q ss_pred -eCCC------cEEEEECCCCe-----EEEEee-------CCCCCEEEEEEeCCCCEEEEEeC-CCcEEEEeCC
Q psy14440 605 -GGDG------NVHMWDLSNGH-----LLTLLT-------GHTDVVRALCFSRDGNILASSGQ-DCSVKLWDFA 658 (711)
Q Consensus 605 -s~Dg------~I~iwDl~sg~-----~i~~l~-------~h~~~V~sl~fspdg~~Lasgs~-Dg~V~iWdl~ 658 (711)
+.|| .+++||+.+.+ ....+. +....-..+.+-++.+++++++. .+.|.|....
T Consensus 259 ~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~ 332 (434)
T 2oit_A 259 AAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQ 332 (434)
T ss_dssp EETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEEC
T ss_pred ccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEec
Confidence 3443 38999998642 222221 12222334444477776666554 4557777643
No 150
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.88 E-value=2.9e-20 Score=198.25 Aligned_cols=249 Identities=15% Similarity=0.169 Sum_probs=179.8
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeC--CCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecc
Q psy14440 382 TLLNARQQVTCAEISEDVSILAVGFS--ESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGH 459 (711)
Q Consensus 382 tl~~h~~~V~~l~fs~dg~~LatG~~--dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h 459 (711)
....+......++|++||++++++.. ++.|.+|++.++.. +.+..+..+
T Consensus 34 ~~~~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~-----------------------------~~~~~~~~~ 84 (347)
T 3hfq_A 34 GLLAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTA-----------------------------HKLNTVVAP 84 (347)
T ss_dssp EEEEECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEE-----------------------------EEEEEEEEE
T ss_pred eeeeccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcE-----------------------------EEeeeeecC
Confidence 34455677888999999994444432 68899998743322 123344456
Q ss_pred cCCEEEEEEcCCCCEEEEEe-CCCeEEEEECC-C--CeEEEEEecC---------CCCEEEEEEcCCCCEEEEEECCCeE
Q psy14440 460 EGPVRKLSFSPDRSLLLSCS-QDNTIRLWSLL-L--WRCLVVYKGH---------GHPVWDIKFSPHGYYFASAGHDRMA 526 (711)
Q Consensus 460 ~~~V~~l~fspdg~~L~s~s-~Dg~V~iwdl~-t--~~~~~~~~~h---------~~~V~~v~~sp~g~~l~sgs~Dg~i 526 (711)
...+..++|++||++|++++ .+++|.+|++. + ...+..+... ...+.+++|+|+|+.++++..++.|
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v 164 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKV 164 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEE
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEE
Confidence 67788999999999998888 68999999996 2 2333333321 2348899999999966666778999
Q ss_pred EEEECC-CCceeE--Eeec-CCCCeeEEEEcCCCCEEEEE-EcCCcEEEEECCC--CcE--EEEeeCCC------CCeEE
Q psy14440 527 RLWATD-SYHPLR--LFVG-HYSDVDCVQFHPNSNYVATG-SSDRTIRLWDCVT--GSH--VRLLTGHK------APVYA 591 (711)
Q Consensus 527 ~lwd~~-~~~~~~--~~~~-h~~~V~~v~~sp~~~~latg-s~Dg~I~iwD~~~--~~~--v~~~~~h~------~~I~~ 591 (711)
++|+++ +++... .+.. .......++|+|+|++++++ ..++.|++|++.. ++. +..+.... ..+..
T Consensus 165 ~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 244 (347)
T 3hfq_A 165 YVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAA 244 (347)
T ss_dssp EEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEE
T ss_pred EEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCccee
Confidence 999998 444322 2222 23467889999999977665 5678999999874 543 22333222 35889
Q ss_pred EEEecCCCEEE-EEeCCCcEEEEECC---CCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCC-CcEEEEeCCC
Q psy14440 592 LSFSVCGRFLA-SAGGDGNVHMWDLS---NGHLLTLLTGHTDVVRALCFSRDGNILASSGQD-CSVKLWDFAK 659 (711)
Q Consensus 592 la~spdg~~La-sgs~Dg~I~iwDl~---sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~D-g~V~iWdl~~ 659 (711)
++|+|||++|+ ++..++.|.+||+. ..+.+..+..+...+.+++|++||++|++++.+ +.|.+|++..
T Consensus 245 i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 245 IRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp EEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeC
Confidence 99999999885 55568999999997 235666777777778999999999988888765 8999997653
No 151
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.88 E-value=1.2e-21 Score=224.86 Aligned_cols=229 Identities=12% Similarity=-0.009 Sum_probs=177.4
Q ss_pred CceEEEEECCCCCEEEEEeC-CCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeeccc-CCEEE
Q psy14440 388 QQVTCAEISEDVSILAVGFS-ESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHE-GPVRK 465 (711)
Q Consensus 388 ~~V~~l~fs~dg~~LatG~~-dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~-~~V~~ 465 (711)
..|++++|++||+.||+++. ||.++||++.+++ .+.+..|. ..|.+
T Consensus 22 ~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~--------------------------------~~~lt~~~~~~~~~ 69 (582)
T 3o4h_A 22 VEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGE--------------------------------TVKLNREPINSVLD 69 (582)
T ss_dssp SCEEEEEEEETTTEEEEEEEETTEEEEEEEETTE--------------------------------EEECCSSCCSEECE
T ss_pred cchheeecCCCCCeEEEEEccCCceeEEEEcCCC--------------------------------cEeeeccccccccc
Confidence 35899999999999999887 9999999964322 23344444 68999
Q ss_pred EEEcCCCCEEEEEeC---CCeEEEEECCC---CeEEEEEecCCCCEEEEEEcCCCC--EEEEEECCCeEEEEECCCCcee
Q psy14440 466 LSFSPDRSLLLSCSQ---DNTIRLWSLLL---WRCLVVYKGHGHPVWDIKFSPHGY--YFASAGHDRMARLWATDSYHPL 537 (711)
Q Consensus 466 l~fspdg~~L~s~s~---Dg~V~iwdl~t---~~~~~~~~~h~~~V~~v~~sp~g~--~l~sgs~Dg~i~lwd~~~~~~~ 537 (711)
++|+|| +.+++++. +...++|.+.. +... .+.. ...+...+|+++|+ .+++++.+ .+.+||+++++..
T Consensus 70 ~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~-~~~~~~~~~s~dg~~~~~~s~~~~-~~~l~d~~~g~~~ 145 (582)
T 3o4h_A 70 PHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEA-VKPMRILSGVDTGEAVVFTGATED-RVALYALDGGGLR 145 (582)
T ss_dssp ECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTT-SCSBEEEEEEECSSCEEEEEECSS-CEEEEEEETTEEE
T ss_pred ccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-cccC-CCCceeeeeCCCCCeEEEEecCCC-CceEEEccCCcEE
Confidence 999999 77777765 45556655432 2222 3322 22344668888775 44444444 4559999988766
Q ss_pred EEeecCCCCeeEEEEcCCCCEEEEEEcC----CcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCC--cEE
Q psy14440 538 RLFVGHYSDVDCVQFHPNSNYVATGSSD----RTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDG--NVH 611 (711)
Q Consensus 538 ~~~~~h~~~V~~v~~sp~~~~latgs~D----g~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg--~I~ 611 (711)
+....+. .+++|+|||++|++++.+ +.|++||+.+++.. .+.+|.+.+.+++|||||++|++++.+| .|+
T Consensus 146 ~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~ 221 (582)
T 3o4h_A 146 ELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLV 221 (582)
T ss_dssp EEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEE
T ss_pred EeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEE
Confidence 6554443 899999999999988877 78999999988754 6678889999999999999999888888 899
Q ss_pred EEECCCCeEEEEeeCCCCCEEEEE--------EeCCCCEEEEEeCCCcEEEEeC
Q psy14440 612 MWDLSNGHLLTLLTGHTDVVRALC--------FSRDGNILASSGQDCSVKLWDF 657 (711)
Q Consensus 612 iwDl~sg~~i~~l~~h~~~V~sl~--------fspdg~~Lasgs~Dg~V~iWdl 657 (711)
+||+.+++.. .+.+|...+.+++ |+|||.++++++.||+++||++
T Consensus 222 ~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 222 TVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp EECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred EEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 9999999888 7778877777777 9999999999999999999998
No 152
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.87 E-value=1.7e-20 Score=198.87 Aligned_cols=231 Identities=12% Similarity=0.080 Sum_probs=180.1
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeeccc-CCEEEEEEcC
Q psy14440 392 CAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHE-GPVRKLSFSP 470 (711)
Q Consensus 392 ~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~-~~V~~l~fsp 470 (711)
.+++++++.++++++.++.|++||+.+.+ ....+..+. ..+.+++|++
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~-------------------------------~~~~~~~~~~~~~~~~~~s~ 52 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDT-------------------------------VYKSCVMPDKFGPGTAMMAP 52 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTE-------------------------------EEEEEECSSCCSSCEEEECT
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCc-------------------------------EEEEEecCCCCCCceeEECC
Confidence 45788899999999999999999986433 233333222 2467899999
Q ss_pred CCCEEE-EEeCCCeEEEEECCCCeEEEEEecCC------CCEEEEEEcCCCCEEEEEECC------------CeEEEEEC
Q psy14440 471 DRSLLL-SCSQDNTIRLWSLLLWRCLVVYKGHG------HPVWDIKFSPHGYYFASAGHD------------RMARLWAT 531 (711)
Q Consensus 471 dg~~L~-s~s~Dg~V~iwdl~t~~~~~~~~~h~------~~V~~v~~sp~g~~l~sgs~D------------g~i~lwd~ 531 (711)
+|++++ +++.++.|.+||+.+++.+..+..+. ..+.+++|+|+|+++++++.+ +.|.+||+
T Consensus 53 dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~ 132 (349)
T 1jmx_B 53 DNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFST 132 (349)
T ss_dssp TSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEG
T ss_pred CCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEEC
Confidence 998665 45568999999999999888776432 237789999999999998865 99999999
Q ss_pred CCCc---eeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCC----------------------
Q psy14440 532 DSYH---PLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHK---------------------- 586 (711)
Q Consensus 532 ~~~~---~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~---------------------- 586 (711)
.+++ .+..+. +...+.+++|+|+++ +++++ +.|++||+.+++.+..+..+.
T Consensus 133 ~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (349)
T 1jmx_B 133 ADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRH 208 (349)
T ss_dssp GGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTC
T ss_pred CCccccceeeecc-CCCcccceeECCCCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcce
Confidence 8743 334443 344689999999999 55553 459999999998877665331
Q ss_pred ----------------------------------------------CCeEEEEEec-CCCEEEEEeCCCcEEEEECCCCe
Q psy14440 587 ----------------------------------------------APVYALSFSV-CGRFLASAGGDGNVHMWDLSNGH 619 (711)
Q Consensus 587 ----------------------------------------------~~I~~la~sp-dg~~Lasgs~Dg~I~iwDl~sg~ 619 (711)
..+.+++|+| +|++|+++ ++.|.+||+.+++
T Consensus 209 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~ 286 (349)
T 1jmx_B 209 EFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRK 286 (349)
T ss_dssp EEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTE
T ss_pred eEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCe
Confidence 1345677889 99999988 8899999999999
Q ss_pred EEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q psy14440 620 LLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKL 660 (711)
Q Consensus 620 ~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~ 660 (711)
.+..+... ..+.+++|+++|++|++++.++.|++||+.+.
T Consensus 287 ~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 287 LIKAANLD-HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTL 326 (349)
T ss_dssp EEEEEECS-SCCCEEEECSSSSCEEEESBSSEEEEEETTTT
T ss_pred EEEEEcCC-CCccceEECCCCCEEEEecCCCeEEEEecccc
Confidence 88887643 34679999999998888888999999999764
No 153
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.87 E-value=1.1e-19 Score=193.03 Aligned_cols=230 Identities=13% Similarity=0.036 Sum_probs=185.3
Q ss_pred CCceEEEEECCCCCEEE-EEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeeccc-----
Q psy14440 387 RQQVTCAEISEDVSILA-VGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHE----- 460 (711)
Q Consensus 387 ~~~V~~l~fs~dg~~La-tG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~----- 460 (711)
...+.+++|++||++++ ++..++.|.+||..+.+.. ..+..+.
T Consensus 88 ~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~-------------------------------~~~~~~~~~~~~ 136 (353)
T 3vgz_A 88 DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVK-------------------------------GRLVLDDRKRTE 136 (353)
T ss_dssp SSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEE-------------------------------EEEESCCCCCCS
T ss_pred CCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeE-------------------------------EEEecCCCcccc
Confidence 34578899999999555 4555789999998654432 2222221
Q ss_pred ----CCEEEEEEcCCCCEEEEEe--CCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCC
Q psy14440 461 ----GPVRKLSFSPDRSLLLSCS--QDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSY 534 (711)
Q Consensus 461 ----~~V~~l~fspdg~~L~s~s--~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~ 534 (711)
..+.+++|+++++++++++ .++.|.+||+.+++.+..+..+...+.+++|+++|+++++++.++.+.+||..++
T Consensus 137 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~ 216 (353)
T 3vgz_A 137 EVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADN 216 (353)
T ss_dssp SCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTT
T ss_pred ccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 1268899999999888776 4789999999999999888866777889999999999999999999999999999
Q ss_pred ceeEEeec----CCCCeeEEEEcCCCCEEEEEEc-CCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEe-CCC
Q psy14440 535 HPLRLFVG----HYSDVDCVQFHPNSNYVATGSS-DRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAG-GDG 608 (711)
Q Consensus 535 ~~~~~~~~----h~~~V~~v~~sp~~~~latgs~-Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs-~Dg 608 (711)
+.+..+.. +...+.+++|+|+++++++++. ++.|.+||..+++.+..+..... .+++|+++|+++++++ .++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~s~dg~~l~v~~~~~~ 294 (353)
T 3vgz_A 217 KILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES--LAVLFNPARNEAYVTHRQAG 294 (353)
T ss_dssp EEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC--CCEEEETTTTEEEEEETTTT
T ss_pred eEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC--ceEEECCCCCEEEEEECCCC
Confidence 88877664 5556888999999998877775 48999999999998888775442 5799999999766655 689
Q ss_pred cEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCC
Q psy14440 609 NVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDC 650 (711)
Q Consensus 609 ~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg 650 (711)
.|.+||+.+++.+..+..+ ..+.+++|+++|++|++++.++
T Consensus 295 ~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 295 KVSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp EEEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEEEEEECC
T ss_pred eEEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEEEccc
Confidence 9999999999998888754 4689999999999777776554
No 154
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.87 E-value=4.3e-21 Score=212.73 Aligned_cols=200 Identities=14% Similarity=0.136 Sum_probs=162.8
Q ss_pred cCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCC----------eEEE-----EEecCCCCEEEEEEcCCCCEEE----EE
Q psy14440 460 EGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLW----------RCLV-----VYKGHGHPVWDIKFSPHGYYFA----SA 520 (711)
Q Consensus 460 ~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~----------~~~~-----~~~~h~~~V~~v~~sp~g~~l~----sg 520 (711)
...+..+++++++.++++++.|+ |++|+.... ..+. ....+...|.+++|+++|++|+ +|
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 34578899999999999999988 999875311 0111 1123567899999999999999 78
Q ss_pred ECCCeEEEEECCCC--------ce---eEEeecCCCCeeEEEEcCC-CCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCC
Q psy14440 521 GHDRMARLWATDSY--------HP---LRLFVGHYSDVDCVQFHPN-SNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAP 588 (711)
Q Consensus 521 s~Dg~i~lwd~~~~--------~~---~~~~~~h~~~V~~v~~sp~-~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~ 588 (711)
+.|++|++||+++. ++ ++.+.+|...|.+++|+|+ +++|++|+.||+|++||++++..+....+|...
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~ 194 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVA 194 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGC
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCc
Confidence 88999999998654 22 4566679999999999997 899999999999999999999887777889999
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCC-------CCEEEEEEeCCCCEEEEE-eCCCc------EEE
Q psy14440 589 VYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHT-------DVVRALCFSRDGNILASS-GQDCS------VKL 654 (711)
Q Consensus 589 I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~-------~~V~sl~fspdg~~Lasg-s~Dg~------V~i 654 (711)
|++++|+|+|++|++|+.||+|++||++ ++....+..|. ..|.+++|++++.++++. +.||. +++
T Consensus 195 v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i 273 (434)
T 2oit_A 195 VTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVM 273 (434)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEE
T ss_pred eeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEE
Confidence 9999999999999999999999999998 66666665443 379999999988877553 34443 999
Q ss_pred EeCCCCC
Q psy14440 655 WDFAKLS 661 (711)
Q Consensus 655 Wdl~~~~ 661 (711)
|++.+..
T Consensus 274 ~~l~~~~ 280 (434)
T 2oit_A 274 ALLPKKE 280 (434)
T ss_dssp EECCCTT
T ss_pred EEeccCC
Confidence 9998643
No 155
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.86 E-value=4e-19 Score=190.67 Aligned_cols=242 Identities=10% Similarity=0.125 Sum_probs=175.0
Q ss_pred CCCceEEEEECCCCCEEEEEeCC----CeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCC--eeEEEeecc
Q psy14440 386 ARQQVTCAEISEDVSILAVGFSE----SYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNA--ETTRTLVGH 459 (711)
Q Consensus 386 h~~~V~~l~fs~dg~~LatG~~d----g~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~--~~~~~l~~h 459 (711)
+......++|++||++|++++.+ +.|.+|++... ++ +.+.....+
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~-----------------------------~g~~~~~~~~~~~ 98 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKE-----------------------------KGTLHLLNTQKTM 98 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETT-----------------------------TTEEEEEEEEECS
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCC-----------------------------CCcEEEeeEeccC
Confidence 66778889999999999998876 78999987431 11 122233334
Q ss_pred cCCEEEEEEcCCCCEEEEEe-CCCeEEEEECCCCeEEE------EEec--------CCCCEEEEEEcCCCCEEEEEE-CC
Q psy14440 460 EGPVRKLSFSPDRSLLLSCS-QDNTIRLWSLLLWRCLV------VYKG--------HGHPVWDIKFSPHGYYFASAG-HD 523 (711)
Q Consensus 460 ~~~V~~l~fspdg~~L~s~s-~Dg~V~iwdl~t~~~~~------~~~~--------h~~~V~~v~~sp~g~~l~sgs-~D 523 (711)
......+++ ++++|++++ .+++|.+|++.....+. ...+ +...+.+++|+|+|+++++++ .+
T Consensus 99 ~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 176 (361)
T 3scy_A 99 GADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGT 176 (361)
T ss_dssp SSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTT
T ss_pred CCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCC
Confidence 556777888 888887776 57899999996433221 1111 123458899999999776655 58
Q ss_pred CeEEEEECCCCce------e-------EEeecCCCCeeEEEEcCCCCEEEEEE-cCCcEEEEECCCCcE--EEEee---C
Q psy14440 524 RMARLWATDSYHP------L-------RLFVGHYSDVDCVQFHPNSNYVATGS-SDRTIRLWDCVTGSH--VRLLT---G 584 (711)
Q Consensus 524 g~i~lwd~~~~~~------~-------~~~~~h~~~V~~v~~sp~~~~latgs-~Dg~I~iwD~~~~~~--v~~~~---~ 584 (711)
+.|++|+++.... + .....+.....+++|+|+|+++++++ .++.|.+||+.+++. +..+. .
T Consensus 177 ~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~ 256 (361)
T 3scy_A 177 DQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTV 256 (361)
T ss_dssp TEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSS
T ss_pred CEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCC
Confidence 9999998875431 1 22234456688999999999988877 589999999987754 22232 2
Q ss_pred CCCCeEEEEEecCCCEEEEEeCC--CcEEEEECC--CCe--EEEEeeCCCCCEEEEEEeCCCCEEEEEe-CCCcEEEEeC
Q psy14440 585 HKAPVYALSFSVCGRFLASAGGD--GNVHMWDLS--NGH--LLTLLTGHTDVVRALCFSRDGNILASSG-QDCSVKLWDF 657 (711)
Q Consensus 585 h~~~I~~la~spdg~~Lasgs~D--g~I~iwDl~--sg~--~i~~l~~h~~~V~sl~fspdg~~Lasgs-~Dg~V~iWdl 657 (711)
+.....+++|+|||++|++++.+ +.|.+|++. +++ .+..+.. ...+.+++|+|||++|++++ .++.|.+|++
T Consensus 257 ~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~ 335 (361)
T 3scy_A 257 NAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFER 335 (361)
T ss_dssp CCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred CCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEE
Confidence 34557899999999999776654 899999985 455 4555554 55678999999999888887 6789999877
Q ss_pred CC
Q psy14440 658 AK 659 (711)
Q Consensus 658 ~~ 659 (711)
..
T Consensus 336 d~ 337 (361)
T 3scy_A 336 DQ 337 (361)
T ss_dssp CT
T ss_pred EC
Confidence 53
No 156
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.86 E-value=2.8e-19 Score=190.65 Aligned_cols=233 Identities=15% Similarity=0.150 Sum_probs=165.7
Q ss_pred eecccCCEEEEEEcCCCCEEEEEeC---CCeEEEEECCCCe--EEEEEecCCCCEEEEEEcCCCCEEEEEE-CCCeEEEE
Q psy14440 456 LVGHEGPVRKLSFSPDRSLLLSCSQ---DNTIRLWSLLLWR--CLVVYKGHGHPVWDIKFSPHGYYFASAG-HDRMARLW 529 (711)
Q Consensus 456 l~~h~~~V~~l~fspdg~~L~s~s~---Dg~V~iwdl~t~~--~~~~~~~h~~~V~~v~~sp~g~~l~sgs-~Dg~i~lw 529 (711)
...+...+..++|+|||+ |++++. ++.|++|++.+++ .+..+..+...+..++|+|+|+++++++ .++++.+|
T Consensus 35 ~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~ 113 (347)
T 3hfq_A 35 LLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVM 113 (347)
T ss_dssp EEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEE
T ss_pred eeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEE
Confidence 344556778899999999 666554 6899999997766 3444455677888999999999888888 78999999
Q ss_pred ECCC-Cc--eeEEeec---------CCCCeeEEEEcCCCCEEEEEEcCCcEEEEECC-CCcEEE--EeeCC-CCCeEEEE
Q psy14440 530 ATDS-YH--PLRLFVG---------HYSDVDCVQFHPNSNYVATGSSDRTIRLWDCV-TGSHVR--LLTGH-KAPVYALS 593 (711)
Q Consensus 530 d~~~-~~--~~~~~~~---------h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~-~~~~v~--~~~~h-~~~I~~la 593 (711)
+++. +. .+..+.. +...+.+++|+|+|++++++..++.|++||+. +++... .+..+ ...+..++
T Consensus 114 ~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~ 193 (347)
T 3hfq_A 114 KIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLV 193 (347)
T ss_dssp EECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEE
T ss_pred EeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEE
Confidence 9963 22 2333322 12348899999999966666678899999998 554332 22322 33678899
Q ss_pred EecCCCEEEEE-eCCCcEEEEECCC--CeE--EEEeeCCC------CCEEEEEEeCCCCEE-EEEeCCCcEEEEeCCCCC
Q psy14440 594 FSVCGRFLASA-GGDGNVHMWDLSN--GHL--LTLLTGHT------DVVRALCFSRDGNIL-ASSGQDCSVKLWDFAKLS 661 (711)
Q Consensus 594 ~spdg~~Lasg-s~Dg~I~iwDl~s--g~~--i~~l~~h~------~~V~sl~fspdg~~L-asgs~Dg~V~iWdl~~~~ 661 (711)
|+|||++|+++ ..++.|.+|++.. ++. +..+.... ..+..++|++||++| +++..++.|.+||+...
T Consensus 194 ~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~- 272 (347)
T 3hfq_A 194 FSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTAD- 272 (347)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGG-
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCC-
Confidence 99999976664 5678999999874 553 33333322 358899999999977 55667899999998631
Q ss_pred CccCccccccccccccccccccceeeecccCCcceEEEEEccCCeeee
Q psy14440 662 DEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
.....+..+..+...+..++|++++.+|+
T Consensus 273 -------------------g~~~~~~~~~~~~~~~~~~~~spdg~~l~ 301 (347)
T 3hfq_A 273 -------------------GHLTLIQQISTEGDFPRDFDLDPTEAFVV 301 (347)
T ss_dssp -------------------GCEEEEEEEECSSSCCCEEEECTTSSEEE
T ss_pred -------------------CcEEEeEEEecCCCCcCeEEECCCCCEEE
Confidence 01123344555555677889999887654
No 157
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.85 E-value=3.9e-20 Score=217.30 Aligned_cols=259 Identities=10% Similarity=-0.006 Sum_probs=191.9
Q ss_pred ceEEEEECCCCCEEEEEeCC---------CeEEEEeCCCCcee-------------eeccCccccccccccCCcEEEEEe
Q psy14440 389 QVTCAEISEDVSILAVGFSE---------SYIKLWSLVPQKLK-------------AMKSSDQLQDIEMECDDILVRIMD 446 (711)
Q Consensus 389 ~V~~l~fs~dg~~LatG~~d---------g~I~vWdl~~~~~~-------------~~~~~~~~~~l~~~~~d~~i~i~d 446 (711)
.|.+++|||||++||+++.+ +.|.+||+.+++.. ...+++++..++..+. +.|++|+
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~ 140 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCA 140 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEES
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEE
Confidence 49999999999999999875 78889999876542 2334566667776665 6899999
Q ss_pred cCCCeeEEEeecccCCE------------------EEEEEcCCCCEEEEEeCCC--------------------------
Q psy14440 447 ERNAETTRTLVGHEGPV------------------RKLSFSPDRSLLLSCSQDN-------------------------- 482 (711)
Q Consensus 447 ~~~~~~~~~l~~h~~~V------------------~~l~fspdg~~L~s~s~Dg-------------------------- 482 (711)
..+++.......+...+ .+++|||||++|++++.|+
T Consensus 141 ~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (723)
T 1xfd_A 141 HVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPK 220 (723)
T ss_dssp SSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCB
T ss_pred CCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCC
Confidence 98888776666554433 7899999999999987653
Q ss_pred --------eEEEEECCCCeEEEEEecC------CCCEEEEEEcCCCCEEEEEEC----CCeEEEEECCCCceeEEeec-C
Q psy14440 483 --------TIRLWSLLLWRCLVVYKGH------GHPVWDIKFSPHGYYFASAGH----DRMARLWATDSYHPLRLFVG-H 543 (711)
Q Consensus 483 --------~V~iwdl~t~~~~~~~~~h------~~~V~~v~~sp~g~~l~sgs~----Dg~i~lwd~~~~~~~~~~~~-h 543 (711)
+|++||+.+++....+..+ ...+.+++|+|+|+++++++. +..|++||+.+++....+.. +
T Consensus 221 ~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~ 300 (723)
T 1xfd_A 221 AGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDES 300 (723)
T ss_dssp TTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEEC
T ss_pred CCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEecc
Confidence 7999999988865666554 667999999999998877653 35799999999987776654 3
Q ss_pred CCCe----eEEEEcCCCCEEEEE--EcCC------cEEEEE-CCCCc--EEEEeeCCCCCeEE-EEEecCCCEEEEEeCC
Q psy14440 544 YSDV----DCVQFHPNSNYVATG--SSDR------TIRLWD-CVTGS--HVRLLTGHKAPVYA-LSFSVCGRFLASAGGD 607 (711)
Q Consensus 544 ~~~V----~~v~~sp~~~~latg--s~Dg------~I~iwD-~~~~~--~v~~~~~h~~~I~~-la~spdg~~Lasgs~D 607 (711)
...+ ..++|+|+|++|+.. ..++ .|.+|| ..++. +.+.+..+...+.. ++|+|||++|+..+.+
T Consensus 301 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~ 380 (723)
T 1xfd_A 301 EAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTE 380 (723)
T ss_dssp SSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESS
T ss_pred CCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcC
Confidence 3434 388999999977754 4566 577777 34444 15555544445554 6999999999866554
Q ss_pred ---CcEEEEECCCC--eEEEEeeC---CCCCEEEEEEeCCCCEEEEEeC
Q psy14440 608 ---GNVHMWDLSNG--HLLTLLTG---HTDVVRALCFSRDGNILASSGQ 648 (711)
Q Consensus 608 ---g~I~iwDl~sg--~~i~~l~~---h~~~V~sl~fspdg~~Lasgs~ 648 (711)
+.++||++... .....+.. |...+..++|++||++|+....
T Consensus 381 ~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~ 429 (723)
T 1xfd_A 381 DLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCE 429 (723)
T ss_dssp SCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECC
T ss_pred CCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEcc
Confidence 78999988642 23334443 5677899999999998876543
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.85 E-value=1e-20 Score=222.40 Aligned_cols=261 Identities=15% Similarity=0.091 Sum_probs=194.4
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEeCCCCcee--------------eeccCccccccccccC---------CcEEEEEecC
Q psy14440 392 CAEISEDVSILAVGFSESYIKLWSLVPQKLK--------------AMKSSDQLQDIEMECD---------DILVRIMDER 448 (711)
Q Consensus 392 ~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~--------------~~~~~~~~~~l~~~~~---------d~~i~i~d~~ 448 (711)
+++|++||++++++ .|+.|++|++.+++.. ....++++..++.++. ++.+++||..
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 67899999766654 6999999999876533 2345566777776655 6899999998
Q ss_pred CCeeE--EEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEE-ecCCCCE-----------------EEE
Q psy14440 449 NAETT--RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY-KGHGHPV-----------------WDI 508 (711)
Q Consensus 449 ~~~~~--~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~-~~h~~~V-----------------~~v 508 (711)
+++.. ..+ .+.+.+++|||||+.|++++ |++|++|++.+++..... .++...| .++
T Consensus 99 ~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~ 174 (719)
T 1z68_A 99 NGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYAL 174 (719)
T ss_dssp TTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCE
T ss_pred CCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccE
Confidence 88762 222 35688999999999999986 789999999888765433 2232223 489
Q ss_pred EEcCCCCEEEEEECCC----------------------------------eEEEEECCCCcee---E-----EeecCCCC
Q psy14440 509 KFSPHGYYFASAGHDR----------------------------------MARLWATDSYHPL---R-----LFVGHYSD 546 (711)
Q Consensus 509 ~~sp~g~~l~sgs~Dg----------------------------------~i~lwd~~~~~~~---~-----~~~~h~~~ 546 (711)
+|+|||++|++++.|. .|++||+.+++.. . .+.+|...
T Consensus 175 ~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 254 (719)
T 1z68_A 175 WWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYY 254 (719)
T ss_dssp EECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEE
T ss_pred EECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcce
Confidence 9999999999988652 7889999987643 2 23467888
Q ss_pred eeEEEEcCCCCEEEEEEcCC----cEEEEE----CCCCcEEEEe----eCCCCCeE-----EEEEecCCCEEEE--EeCC
Q psy14440 547 VDCVQFHPNSNYVATGSSDR----TIRLWD----CVTGSHVRLL----TGHKAPVY-----ALSFSVCGRFLAS--AGGD 607 (711)
Q Consensus 547 V~~v~~sp~~~~latgs~Dg----~I~iwD----~~~~~~v~~~----~~h~~~I~-----~la~spdg~~Las--gs~D 607 (711)
+.+++|+||++++++....+ .|.+|| +.++++...+ .+|.+.+. +++|+|||+.|+. +..+
T Consensus 255 ~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 334 (719)
T 1z68_A 255 FSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKD 334 (719)
T ss_dssp EEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTT
T ss_pred EEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccC
Confidence 99999999987777754332 488999 8888776655 46777776 8899999996554 4455
Q ss_pred C--cEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCC-----CcEEEEeCCC
Q psy14440 608 G--NVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQD-----CSVKLWDFAK 659 (711)
Q Consensus 608 g--~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~D-----g~V~iWdl~~ 659 (711)
| .|.+||+.+++ ...+..+...+..+.++ +++.|+..+.+ +.+++|.+..
T Consensus 335 g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 335 GYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp SCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred CceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 5 67788887776 45566566678888888 88877777665 8899998764
No 159
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.85 E-value=2.6e-19 Score=188.52 Aligned_cols=222 Identities=9% Similarity=0.046 Sum_probs=175.2
Q ss_pred ccccccCCcEEEEEecCCCeeEEEeeccc-C-CEEEEEEcCCCCEEE-EEeCCCeEEEEECCCCeEEEEEecC-----CC
Q psy14440 432 DIEMECDDILVRIMDERNAETTRTLVGHE-G-PVRKLSFSPDRSLLL-SCSQDNTIRLWSLLLWRCLVVYKGH-----GH 503 (711)
Q Consensus 432 ~l~~~~~d~~i~i~d~~~~~~~~~l~~h~-~-~V~~l~fspdg~~L~-s~s~Dg~V~iwdl~t~~~~~~~~~h-----~~ 503 (711)
.++.+..++.|.+||..+++....+.... . .+.+++|+++|++++ +++.++.|.+||+.+++.+..+... ..
T Consensus 3 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 82 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVK 82 (337)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEE
T ss_pred EEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccc
Confidence 35566778999999999998887776333 2 478999999998765 5556789999999999888777632 12
Q ss_pred CEEEEEEcCCCCEEEEEE------------CCCeEEEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEE
Q psy14440 504 PVWDIKFSPHGYYFASAG------------HDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLW 571 (711)
Q Consensus 504 ~V~~v~~sp~g~~l~sgs------------~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iw 571 (711)
.+.+++|+++|+++++++ .++.|.+||+.+++.+..+.. ...+.+++|+|++++|+++ ++.|++|
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~ 159 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVM 159 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEE
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEE
Confidence 567899999999988886 579999999999888777764 4568899999999988888 6899999
Q ss_pred ECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCC------------------------cEEEEECCCCeEE-EEeeC
Q psy14440 572 DCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDG------------------------NVHMWDLSNGHLL-TLLTG 626 (711)
Q Consensus 572 D~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg------------------------~I~iwDl~sg~~i-~~l~~ 626 (711)
|+.+++.+..+..+... ..++|+|+|++|+.++.++ .|.+||+.+++.. ..+..
T Consensus 160 d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~ 238 (337)
T 1pby_B 160 DPEAGTLVEDKPIQSWE-AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI 238 (337)
T ss_dssp ETTTTEEEEEECSTTTT-TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEE
T ss_pred ECCCCcEeeeeeccccC-CCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCC
Confidence 99999988877654411 1237899998776554332 4689999998874 23445
Q ss_pred CCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 627 HTDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 627 h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
+...+.+++|+++|++|+++ ++.|++||+.+
T Consensus 239 ~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~ 269 (337)
T 1pby_B 239 MDVFYFSTAVNPAKTRAFGA--YNVLESFDLEK 269 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEE--ESEEEEEETTT
T ss_pred CCCceeeEEECCCCCEEEEe--CCeEEEEECCC
Confidence 66778999999999999988 79999999865
No 160
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.84 E-value=2.7e-18 Score=184.19 Aligned_cols=229 Identities=15% Similarity=0.154 Sum_probs=161.8
Q ss_pred ccCCEEEEEEcCCCCEEEEEeCC----CeEEEEECCC--CeE--EEEEecCCCCEEEEEEcCCCCEEEEEE-CCCeEEEE
Q psy14440 459 HEGPVRKLSFSPDRSLLLSCSQD----NTIRLWSLLL--WRC--LVVYKGHGHPVWDIKFSPHGYYFASAG-HDRMARLW 529 (711)
Q Consensus 459 h~~~V~~l~fspdg~~L~s~s~D----g~V~iwdl~t--~~~--~~~~~~h~~~V~~v~~sp~g~~l~sgs-~Dg~i~lw 529 (711)
+...+..++|+|||++|++++.+ +.|.+|++.. ++. +.....+......+++ +++++++++ .++.+.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 66778889999999999999886 7999998865 443 3344445666777888 788777776 68899999
Q ss_pred ECCCCceeEEe------ec--------CCCCeeEEEEcCCCCEEEEEE-cCCcEEEEECCCCcE-------------EEE
Q psy14440 530 ATDSYHPLRLF------VG--------HYSDVDCVQFHPNSNYVATGS-SDRTIRLWDCVTGSH-------------VRL 581 (711)
Q Consensus 530 d~~~~~~~~~~------~~--------h~~~V~~v~~sp~~~~latgs-~Dg~I~iwD~~~~~~-------------v~~ 581 (711)
++.....+..+ .+ +...+.+++|+|+|++|++++ .++.|++|++..... ...
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 99754332211 11 123358899999999776665 478999998875431 122
Q ss_pred eeCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCCCeE--EEEee---CCCCCEEEEEEeCCCCEEEEEeCC--CcEE
Q psy14440 582 LTGHKAPVYALSFSVCGRFLASAG-GDGNVHMWDLSNGHL--LTLLT---GHTDVVRALCFSRDGNILASSGQD--CSVK 653 (711)
Q Consensus 582 ~~~h~~~I~~la~spdg~~Lasgs-~Dg~I~iwDl~sg~~--i~~l~---~h~~~V~sl~fspdg~~Lasgs~D--g~V~ 653 (711)
...+...+..++|+|||++|++++ .++.|.+||+.+++. +..+. .+.....+++|++||++|++++.+ ++|.
T Consensus 206 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~ 285 (361)
T 3scy_A 206 KVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVA 285 (361)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEE
T ss_pred ecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEE
Confidence 233456688999999999888777 689999999988765 33333 334567899999999988776654 8999
Q ss_pred EEeCCCCCCccCccccccccccccccccccceeeecccCCcceEEEEEccCCeeee
Q psy14440 654 LWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 654 iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
+|++..... ....+..+.+ ...+.+++|++++.+|+
T Consensus 286 v~~~~~~~g-------------------~~~~~~~~~~-g~~~~~~~~spdg~~l~ 321 (361)
T 3scy_A 286 IFKVDETNG-------------------TLTKVGYQLT-GIHPRNFIITPNGKYLL 321 (361)
T ss_dssp EEEECTTTC-------------------CEEEEEEEEC-SSCCCEEEECTTSCEEE
T ss_pred EEEEcCCCC-------------------cEEEeeEecC-CCCCceEEECCCCCEEE
Confidence 999863211 1112233333 34566888888887654
No 161
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.83 E-value=9e-19 Score=188.98 Aligned_cols=242 Identities=11% Similarity=0.075 Sum_probs=173.9
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEeCC-CCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEE
Q psy14440 387 RQQVTCAEISEDVSILAVGFSESYIKLWSLV-PQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRK 465 (711)
Q Consensus 387 ~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~ 465 (711)
...+..++|++||++|++++.+ .|.+|++. ++++.. ......+ +.+.+
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~-----------------------------~~~~~~~-g~~~~ 87 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVH-----------------------------EASHPIG-GHPRA 87 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEE-----------------------------EEEEECC-SSGGG
T ss_pred CCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEE-----------------------------eeEeecC-CCCcc
Confidence 3467889999999999988887 89999974 222110 0011111 22445
Q ss_pred EEEcCCCCE--EEEEe-------------CCCeEEEEECC-CCeEEEEEe----cCCCCEEEEEEcCCCCEEEEEEC-CC
Q psy14440 466 LSFSPDRSL--LLSCS-------------QDNTIRLWSLL-LWRCLVVYK----GHGHPVWDIKFSPHGYYFASAGH-DR 524 (711)
Q Consensus 466 l~fspdg~~--L~s~s-------------~Dg~V~iwdl~-t~~~~~~~~----~h~~~V~~v~~sp~g~~l~sgs~-Dg 524 (711)
++|+|||++ +++++ .+|++.+|++. .++....+. .+...+.+++|+|+|+++++++. ++
T Consensus 88 ~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~ 167 (365)
T 1jof_A 88 NDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTAN 167 (365)
T ss_dssp GCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTT
T ss_pred EEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCC
Confidence 889999994 45553 68999999997 465544333 25667999999999998887764 68
Q ss_pred eEEEEECC-CCcee--EEee--cCCCCeeEEEEcCCCCEEEEEEc-CCcEEEEECC--CCcEEE---Eee-------CCC
Q psy14440 525 MARLWATD-SYHPL--RLFV--GHYSDVDCVQFHPNSNYVATGSS-DRTIRLWDCV--TGSHVR---LLT-------GHK 586 (711)
Q Consensus 525 ~i~lwd~~-~~~~~--~~~~--~h~~~V~~v~~sp~~~~latgs~-Dg~I~iwD~~--~~~~v~---~~~-------~h~ 586 (711)
.|++|+++ +++.. ..+. .|...+..++|+|+|+++++++. +++|.+|++. +|+... .+. +|.
T Consensus 168 ~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 247 (365)
T 1jof_A 168 KLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRD 247 (365)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBC
T ss_pred EEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcc
Confidence 99999998 66543 2333 24567999999999999988875 6899999765 565421 222 122
Q ss_pred C------CeEEEE-EecCCCEEEEEeCC-C-----cEEEEECC-CCeEEE---EeeCCCCCEEEEEEeC---CCCEEEEE
Q psy14440 587 A------PVYALS-FSVCGRFLASAGGD-G-----NVHMWDLS-NGHLLT---LLTGHTDVVRALCFSR---DGNILASS 646 (711)
Q Consensus 587 ~------~I~~la-~spdg~~Lasgs~D-g-----~I~iwDl~-sg~~i~---~l~~h~~~V~sl~fsp---dg~~Lasg 646 (711)
. .+..++ |+|||++|++++.+ + +|.+|++. +|+... ....+...+..++|+| ||++|+++
T Consensus 248 ~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~ 327 (365)
T 1jof_A 248 PETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAIT 327 (365)
T ss_dssp TTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEE
T ss_pred cccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEE
Confidence 2 588999 99999998877643 2 89999996 676543 2334555567899999 89999999
Q ss_pred eCC-CcEEEEeCCC
Q psy14440 647 GQD-CSVKLWDFAK 659 (711)
Q Consensus 647 s~D-g~V~iWdl~~ 659 (711)
+.+ ++|+||++..
T Consensus 328 ~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 328 DDQEGWLEIYRWKD 341 (365)
T ss_dssp CSSSCEEEEEEEET
T ss_pred EcCCCeEEEEEEch
Confidence 865 8999999864
No 162
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.82 E-value=5.9e-19 Score=190.64 Aligned_cols=248 Identities=13% Similarity=0.010 Sum_probs=175.5
Q ss_pred EEEEEecCCCceEE-----EEECCCCCEEEEEeC-CCe--EEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCC
Q psy14440 379 ACYTLLNARQQVTC-----AEISEDVSILAVGFS-ESY--IKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNA 450 (711)
Q Consensus 379 ~~~tl~~h~~~V~~-----l~fs~dg~~LatG~~-dg~--I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 450 (711)
....+..|...... .+|||||++||+++. +|. |.+|++.+ +
T Consensus 22 ~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~-------------------------------g 70 (388)
T 3pe7_A 22 QVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNT-------------------------------Q 70 (388)
T ss_dssp EEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTT-------------------------------C
T ss_pred ceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCC-------------------------------C
Confidence 34455666666665 889999999999887 663 55556543 3
Q ss_pred eeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEE--cCCCCEEEEEE-------
Q psy14440 451 ETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKF--SPHGYYFASAG------- 521 (711)
Q Consensus 451 ~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~--sp~g~~l~sgs------- 521 (711)
+......+|...+.+++|+|||+.|+.++.++.|++||+.+++....+..+...+....| ++++.+++...
T Consensus 71 ~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~ 150 (388)
T 3pe7_A 71 VATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWV 150 (388)
T ss_dssp EEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCC
T ss_pred ceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccc
Confidence 333334455555557789999999999999999999999999988888777766654444 88998887432
Q ss_pred ---------------CCCeEEEEECCCCceeEEeecCCCCeeEEEEcC-CCCEEEEEEcC------CcEEEEECCCCcEE
Q psy14440 522 ---------------HDRMARLWATDSYHPLRLFVGHYSDVDCVQFHP-NSNYVATGSSD------RTIRLWDCVTGSHV 579 (711)
Q Consensus 522 ---------------~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp-~~~~latgs~D------g~I~iwD~~~~~~v 579 (711)
.++.|++||+.+++... +..+...+..++|+| +|+.|+.++.+ ..|.++|...+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~- 228 (388)
T 3pe7_A 151 PLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV-ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM- 228 (388)
T ss_dssp CCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE-EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-
T ss_pred cccccchhhhhhccCCcceEEEEECCCCceEE-eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-
Confidence 44789999999886544 445667789999999 99999887763 3788888776554
Q ss_pred EEeeCCC--CCeEEEEEecCCCEEEEEeC-CC----cEEEEECCCCeEE--EEeeCCCCC---EEEEEEeCCCCEEEEE-
Q psy14440 580 RLLTGHK--APVYALSFSVCGRFLASAGG-DG----NVHMWDLSNGHLL--TLLTGHTDV---VRALCFSRDGNILASS- 646 (711)
Q Consensus 580 ~~~~~h~--~~I~~la~spdg~~Lasgs~-Dg----~I~iwDl~sg~~i--~~l~~h~~~---V~sl~fspdg~~Lasg- 646 (711)
+.+..+. ..+..++|||||+.|+..+. ++ .|++||+.+++.. ..+.++... ...++|+|||+.|+..
T Consensus 229 ~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 308 (388)
T 3pe7_A 229 RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDV 308 (388)
T ss_dssp EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC----
T ss_pred EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEe
Confidence 4444444 35788999999998765443 22 3999999998743 333331100 1123799999987754
Q ss_pred --------eCCCcEEEEeCCC
Q psy14440 647 --------GQDCSVKLWDFAK 659 (711)
Q Consensus 647 --------s~Dg~V~iWdl~~ 659 (711)
+.++.|++||+..
T Consensus 309 ~~~~~~~~~~~~~i~~~d~~~ 329 (388)
T 3pe7_A 309 QDDSGYKIENDPFLYVFNMKN 329 (388)
T ss_dssp --------CCCCEEEEEETTT
T ss_pred eeccccccCCCCEEEEEeccC
Confidence 4566899999875
No 163
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.82 E-value=3.3e-18 Score=181.93 Aligned_cols=263 Identities=14% Similarity=0.159 Sum_probs=201.9
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEee-cccCCEEEE
Q psy14440 388 QQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLV-GHEGPVRKL 466 (711)
Q Consensus 388 ~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~-~h~~~V~~l 466 (711)
+.+.+++++++|++++++..++.+++|+........... .....++.|.+||..+++....+. ++-....++
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gi 96 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRG-------LGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGL 96 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGG-------GCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEE
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccc-------cccccCCcEEEEECCCCeEEeccCCCccCCceEE
Confidence 679999999999999999888776665554332211100 011145678999988888776654 455678999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCe-EEEEE---------ecCCCCEEEEEEcC-CCCEEEEEE-CCCeEEEEECCCC
Q psy14440 467 SFSPDRSLLLSCSQDNTIRLWSLLLWR-CLVVY---------KGHGHPVWDIKFSP-HGYYFASAG-HDRMARLWATDSY 534 (711)
Q Consensus 467 ~fspdg~~L~s~s~Dg~V~iwdl~t~~-~~~~~---------~~h~~~V~~v~~sp-~g~~l~sgs-~Dg~i~lwd~~~~ 534 (711)
+++++|+++++.+.++.|++||..... .+..+ .++.....++++++ +|.++++.+ .++.|++|+ ..+
T Consensus 97 a~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g 175 (329)
T 3fvz_A 97 SIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSG 175 (329)
T ss_dssp EECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTS
T ss_pred EECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCC
Confidence 999999988888889999999986442 44444 24455789999999 788888886 699999999 456
Q ss_pred ceeEEeec----------CCCCeeEEEEcCC-CCEEEEEEcCCcEEEEECCCCcEEEEee--CCCCCeEEEEEecCCCEE
Q psy14440 535 HPLRLFVG----------HYSDVDCVQFHPN-SNYVATGSSDRTIRLWDCVTGSHVRLLT--GHKAPVYALSFSVCGRFL 601 (711)
Q Consensus 535 ~~~~~~~~----------h~~~V~~v~~sp~-~~~latgs~Dg~I~iwD~~~~~~v~~~~--~h~~~I~~la~spdg~~L 601 (711)
..+..+.. +......++++++ ++++++...++.|++||..+|+.+..+. .+...+.+++|+| |..+
T Consensus 176 ~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~ 254 (329)
T 3fvz_A 176 KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLF 254 (329)
T ss_dssp CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEE
T ss_pred CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEE
Confidence 66666642 2234889999998 7777777788999999999899988884 4567789999999 4333
Q ss_pred EEE-------eCCCcEEEEECCCCeEEEEee---CCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 602 ASA-------GGDGNVHMWDLSNGHLLTLLT---GHTDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 602 asg-------s~Dg~I~iwDl~sg~~i~~l~---~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
++. ..+++|++||..+|+.+..+. ++...+.+|+++++|+++++...+++|++|++..
T Consensus 255 ~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 255 AVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 333 345589999999999998883 6777899999999998889888999999999864
No 164
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.80 E-value=7.8e-17 Score=166.87 Aligned_cols=243 Identities=8% Similarity=0.162 Sum_probs=184.7
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEE
Q psy14440 386 ARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRK 465 (711)
Q Consensus 386 h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~ 465 (711)
+-....+++++++|+++++...++.|.+|+..+..+..+.. .. ...+|...+.+
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~---------------------~~-----~~~~~~~~p~~ 81 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGE---------------------CG-----KRDSQLLYPNR 81 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECC---------------------BS-----SSTTCBSSEEE
T ss_pred ccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecc---------------------cC-----CCcccccCceE
Confidence 34578999999999999998889999999976432211100 00 00134567889
Q ss_pred EEEc-CCCCEEEEEeC-CCeEEEEECCCCeEEEEEec-CCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEee-
Q psy14440 466 LSFS-PDRSLLLSCSQ-DNTIRLWSLLLWRCLVVYKG-HGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFV- 541 (711)
Q Consensus 466 l~fs-pdg~~L~s~s~-Dg~V~iwdl~t~~~~~~~~~-h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~- 541 (711)
++++ ++++++++... ++.|++|| .+++.+..+.. +...+.+++++++|+++++.+.++.|++|+.+ ++.+..+.
T Consensus 82 i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~ 159 (286)
T 1q7f_A 82 VAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGC 159 (286)
T ss_dssp EEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEEC
T ss_pred EEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCC
Confidence 9994 66766655533 88999999 56777766643 44678999999999988888888999999965 45555554
Q ss_pred -cCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCC--CCCeEEEEEecCCCEEEEEeCCC-cEEEEECCC
Q psy14440 542 -GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH--KAPVYALSFSVCGRFLASAGGDG-NVHMWDLSN 617 (711)
Q Consensus 542 -~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h--~~~I~~la~spdg~~Lasgs~Dg-~I~iwDl~s 617 (711)
++...+.+++++++++++++.+.++.|++||. +++.+..+..+ ...+..++++++|+++++...++ .|.+||. +
T Consensus 160 ~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~ 237 (286)
T 1q7f_A 160 SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-D 237 (286)
T ss_dssp TTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-T
T ss_pred CCccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-C
Confidence 45567899999999998888778999999997 56666676543 36789999999999888888776 9999995 6
Q ss_pred CeEEEEeeCCC--CCEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 618 GHLLTLLTGHT--DVVRALCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 618 g~~i~~l~~h~--~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
++.+..+..+. ..+.+++++++|+++++ +.|++|++|++..
T Consensus 238 g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 238 GQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp SCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred CCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccc
Confidence 77777776554 34789999999987777 6799999999865
No 165
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.79 E-value=2.5e-18 Score=197.16 Aligned_cols=234 Identities=14% Similarity=0.070 Sum_probs=176.0
Q ss_pred EecCC-CceEEEEECCCCCEEEEEeC---CCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeec
Q psy14440 383 LLNAR-QQVTCAEISEDVSILAVGFS---ESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVG 458 (711)
Q Consensus 383 l~~h~-~~V~~l~fs~dg~~LatG~~---dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~ 458 (711)
+..|. ..+.+++|||| +++++++. +...+||.+... ..+... .+..
T Consensus 59 lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~----------------------------~~g~~~-~l~~ 108 (582)
T 3o4h_A 59 LNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS----------------------------RPGEEQ-RLEA 108 (582)
T ss_dssp CCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT----------------------------STTCCE-ECTT
T ss_pred eecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc----------------------------CCCccc-cccC
Confidence 44455 58899999999 77777765 444566554210 011111 2222
Q ss_pred ccCCEEEEEEcCCCCE-EEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECC----CeEEEEECCC
Q psy14440 459 HEGPVRKLSFSPDRSL-LLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHD----RMARLWATDS 533 (711)
Q Consensus 459 h~~~V~~l~fspdg~~-L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~D----g~i~lwd~~~ 533 (711)
+. .+...+|++||+. +++++.++.+.+||+.+++.......+. ++++|+|+|+++++++.+ +.|++||+.+
T Consensus 109 ~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~ 184 (582)
T 3o4h_A 109 VK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSS 184 (582)
T ss_dssp SC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTT
T ss_pred CC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCC
Confidence 22 2335678888763 3333344445699999988776665443 789999999999988877 7899999998
Q ss_pred CceeEEeecCCCCeeEEEEcCCCCEEEEEEcCC--cEEEEECCCCcEEEEeeCCCCCeEEEE--------EecCCCEEEE
Q psy14440 534 YHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR--TIRLWDCVTGSHVRLLTGHKAPVYALS--------FSVCGRFLAS 603 (711)
Q Consensus 534 ~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg--~I~iwD~~~~~~v~~~~~h~~~I~~la--------~spdg~~Las 603 (711)
++.. .+.+|...+..++|+|||++|+++..++ .|++||+.+++.. .+.+|...+..++ |+|||.++++
T Consensus 185 g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~ 262 (582)
T 3o4h_A 185 GGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVV 262 (582)
T ss_dssp CCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEE
T ss_pred CCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEE
Confidence 7754 5678888899999999999999888888 8999999999887 7778887777777 9999999999
Q ss_pred EeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCc---EEEEeCC
Q psy14440 604 AGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCS---VKLWDFA 658 (711)
Q Consensus 604 gs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~---V~iWdl~ 658 (711)
++.||++++|++ |+.+. .+.+.|.+++|+ +|+++++++.+.+ |.+||..
T Consensus 263 ~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 263 ARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp EEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTC
T ss_pred EEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCC
Confidence 999999999999 77654 345778999999 9999999888754 6677665
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.79 E-value=4e-18 Score=201.53 Aligned_cols=264 Identities=14% Similarity=0.054 Sum_probs=184.6
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeee----------------ccCccccccccccCC---------cEEE
Q psy14440 389 QVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAM----------------KSSDQLQDIEMECDD---------ILVR 443 (711)
Q Consensus 389 ~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~----------------~~~~~~~~l~~~~~d---------~~i~ 443 (711)
...+++|++||++++++ ||.|++|++.+++...+ ..++++..+++...+ +.+.
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 45688999999999997 89999999987664322 225666667666654 5677
Q ss_pred EEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEE-ecCCCCE-----------------
Q psy14440 444 IMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY-KGHGHPV----------------- 505 (711)
Q Consensus 444 i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~-~~h~~~V----------------- 505 (711)
+||..+++.. .+..|.+.+...+|||||+.|+.++ |+.|++|++.+++..... .++...+
T Consensus 96 ~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~ 173 (740)
T 4a5s_A 96 IYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAY 173 (740)
T ss_dssp EEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSS
T ss_pred EEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCC
Confidence 9999888754 5777888999999999999999885 689999999887755432 2222222
Q ss_pred EEEEEcCCCCEEEEEECCC------------------------------------eEEEEECCC---C---ceeEEee--
Q psy14440 506 WDIKFSPHGYYFASAGHDR------------------------------------MARLWATDS---Y---HPLRLFV-- 541 (711)
Q Consensus 506 ~~v~~sp~g~~l~sgs~Dg------------------------------------~i~lwd~~~---~---~~~~~~~-- 541 (711)
..+.|||||++|+.++.|. ++++||+.+ + +......
T Consensus 174 ~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~ 253 (740)
T 4a5s_A 174 SALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPA 253 (740)
T ss_dssp BCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCH
T ss_pred cceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCc
Confidence 2489999999999886322 588899988 7 3333322
Q ss_pred ---cCCCCeeEEEEcCCCCEEEEEEc----CCcEEEEECCCCc----EEE--Ee--eCCCCCeE-----EEEEecCCCEE
Q psy14440 542 ---GHYSDVDCVQFHPNSNYVATGSS----DRTIRLWDCVTGS----HVR--LL--TGHKAPVY-----ALSFSVCGRFL 601 (711)
Q Consensus 542 ---~h~~~V~~v~~sp~~~~latgs~----Dg~I~iwD~~~~~----~v~--~~--~~h~~~I~-----~la~spdg~~L 601 (711)
+|...+..++|+|||+.++.... +..|++||+.+|+ +.. .+ .+|.+.|. ..+|+|||+.|
T Consensus 254 ~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l 333 (740)
T 4a5s_A 254 SMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSF 333 (740)
T ss_dssp HHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEE
T ss_pred cCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEE
Confidence 37778999999999997776543 2379999999987 322 22 45665554 78999999987
Q ss_pred E-EEeC-C--CcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEE-EeC----CCcEEEEeCC
Q psy14440 602 A-SAGG-D--GNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILAS-SGQ----DCSVKLWDFA 658 (711)
Q Consensus 602 a-sgs~-D--g~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Las-gs~----Dg~V~iWdl~ 658 (711)
+ ..+. + ..|++||+.+++......+ ...|..+.+ .|++.|+. ++. .+...||.+.
T Consensus 334 ~~~~s~~~G~~~l~~~~~~~~~~~~lT~g-~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~ 397 (740)
T 4a5s_A 334 YKIISNEEGYRHICYFQIDKKDCTFITKG-TWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQ 397 (740)
T ss_dssp EEEEECTTSCEEEEEEETTCSSCEESCCS-SSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEEE
T ss_pred EEEEEcCCCceEEEEEECCCCceEecccC-CEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEEE
Confidence 7 6653 3 3688999887765543333 445655542 34655544 443 2445666553
No 167
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.79 E-value=8.5e-19 Score=206.08 Aligned_cols=270 Identities=9% Similarity=-0.018 Sum_probs=196.1
Q ss_pred ceEEEEECCCCCEEEEEeC---------CCeEEEEeCCCCce---ee-------eccCccccccccccCCcEEEEEecCC
Q psy14440 389 QVTCAEISEDVSILAVGFS---------ESYIKLWSLVPQKL---KA-------MKSSDQLQDIEMECDDILVRIMDERN 449 (711)
Q Consensus 389 ~V~~l~fs~dg~~LatG~~---------dg~I~vWdl~~~~~---~~-------~~~~~~~~~l~~~~~d~~i~i~d~~~ 449 (711)
.|.+++|||||++||+++. ++.|++||+.+++. .. ..+++++..++... ++.|++|+..+
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~ 139 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPG 139 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTT
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCCCEEEEEE-CCeEEEEeCCC
Confidence 3899999999999999876 78999999988765 32 34566777777764 67999999988
Q ss_pred CeeEEEe-ecccCCE-----------------EEEEEcCCCCEEEEEeCCC-----------------------------
Q psy14440 450 AETTRTL-VGHEGPV-----------------RKLSFSPDRSLLLSCSQDN----------------------------- 482 (711)
Q Consensus 450 ~~~~~~l-~~h~~~V-----------------~~l~fspdg~~L~s~s~Dg----------------------------- 482 (711)
++..... .++...| .+++|||||++|++++.|.
T Consensus 140 g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~ 219 (719)
T 1z68_A 140 DPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGA 219 (719)
T ss_dssp SCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTS
T ss_pred CCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCC
Confidence 7765432 2333333 4899999999999988652
Q ss_pred -----eEEEEECCCCeEE---E-----EEecCCCCEEEEEEcCCCCEEEEEECC----CeEEEEE----CCCCceeEEe-
Q psy14440 483 -----TIRLWSLLLWRCL---V-----VYKGHGHPVWDIKFSPHGYYFASAGHD----RMARLWA----TDSYHPLRLF- 540 (711)
Q Consensus 483 -----~V~iwdl~t~~~~---~-----~~~~h~~~V~~v~~sp~g~~l~sgs~D----g~i~lwd----~~~~~~~~~~- 540 (711)
+|++||+.+++.. . .+.+|...+.+++|+|+++++++.... ..|.+|| ..+++....+
T Consensus 220 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~ 299 (719)
T 1z68_A 220 KNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQE 299 (719)
T ss_dssp CCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGE
T ss_pred CCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEe
Confidence 7899999887642 1 123578889999999998777664432 2488899 7777666555
Q ss_pred ---ecCCCCee-----EEEEcCCCCEEEE--EEcCC--cEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCC-
Q psy14440 541 ---VGHYSDVD-----CVQFHPNSNYVAT--GSSDR--TIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGD- 607 (711)
Q Consensus 541 ---~~h~~~V~-----~v~~sp~~~~lat--gs~Dg--~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~D- 607 (711)
.+|...+. ++.|+|+|+.|+. +..+| .|.+||+.+++ .+.+..+...+..+.++ +|+.|+..+.+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~ 377 (719)
T 1z68_A 300 HIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEF 377 (719)
T ss_dssp EEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCG
T ss_pred cccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecC
Confidence 46777777 8999999996654 33444 57778887776 55666667778888888 88887776654
Q ss_pred ----CcEEEEECCC--Ce-EEEEee----CCCCCEEEEEEeCCCCEEEE-EeCC--CcEEEEeCCCCC
Q psy14440 608 ----GNVHMWDLSN--GH-LLTLLT----GHTDVVRALCFSRDGNILAS-SGQD--CSVKLWDFAKLS 661 (711)
Q Consensus 608 ----g~I~iwDl~s--g~-~i~~l~----~h~~~V~sl~fspdg~~Las-gs~D--g~V~iWdl~~~~ 661 (711)
+.+++|.+.. +. ....+. +|...+..++|+++|++++. ++.+ ..+.+||+.+..
T Consensus 378 ~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~ 445 (719)
T 1z68_A 378 EEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQ 445 (719)
T ss_dssp GGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCC
T ss_pred CCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCC
Confidence 7888887653 42 123333 25667889999999987664 4433 468899886543
No 168
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.78 E-value=6e-17 Score=174.61 Aligned_cols=199 Identities=7% Similarity=0.103 Sum_probs=147.2
Q ss_pred ccCCEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEEecC-CCCEEEEEEcCCCCE--EEEEE-------------
Q psy14440 459 HEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL-LWRCLVVYKGH-GHPVWDIKFSPHGYY--FASAG------------- 521 (711)
Q Consensus 459 h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~-t~~~~~~~~~h-~~~V~~v~~sp~g~~--l~sgs------------- 521 (711)
+...+..++|+|||++|++++.+ .|.+|++. +++........ .+.+.+++|+|+|++ +++++
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 33467889999999999999988 99999997 77765443311 123556899999984 44543
Q ss_pred CCCeEEEEECC-CCceeEEee----cCCCCeeEEEEcCCCCEEEEEEc-CCcEEEEECC-CCcEE--EEee--CCCCCeE
Q psy14440 522 HDRMARLWATD-SYHPLRLFV----GHYSDVDCVQFHPNSNYVATGSS-DRTIRLWDCV-TGSHV--RLLT--GHKAPVY 590 (711)
Q Consensus 522 ~Dg~i~lwd~~-~~~~~~~~~----~h~~~V~~v~~sp~~~~latgs~-Dg~I~iwD~~-~~~~v--~~~~--~h~~~I~ 590 (711)
.++++.+|+++ .++....+. .+...+.+++|+|+|++|++++. ++.|++||+. +++.. ..+. .|...+.
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence 68999999997 455544333 25567999999999999887764 6799999998 77653 2333 2456799
Q ss_pred EEEEecCCCEEEEEeC-CCcEEEEECC--CCeEE---EEee-------CCCC------CEEEEE-EeCCCCEEEEEeCC-
Q psy14440 591 ALSFSVCGRFLASAGG-DGNVHMWDLS--NGHLL---TLLT-------GHTD------VVRALC-FSRDGNILASSGQD- 649 (711)
Q Consensus 591 ~la~spdg~~Lasgs~-Dg~I~iwDl~--sg~~i---~~l~-------~h~~------~V~sl~-fspdg~~Lasgs~D- 649 (711)
.++|+|||++|++++. ++.|.+|++. +|+.. ..+. +|.. .+..++ |+|||++|++++.+
T Consensus 197 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~ 276 (365)
T 1jof_A 197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRAN 276 (365)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEES
T ss_pred EeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCC
Confidence 9999999999988775 6899999765 56643 2222 1222 588999 99999988876643
Q ss_pred C-----cEEEEeCC
Q psy14440 650 C-----SVKLWDFA 658 (711)
Q Consensus 650 g-----~V~iWdl~ 658 (711)
+ +|++|++.
T Consensus 277 ~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 277 KFELQGYIAGFKLR 290 (365)
T ss_dssp STTSCCEEEEEEEC
T ss_pred CCCCCCeEEEEEEC
Confidence 2 89999986
No 169
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.77 E-value=2.8e-17 Score=173.93 Aligned_cols=189 Identities=12% Similarity=0.044 Sum_probs=149.9
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCC-CCEEEEEEcCCCCEEE-EEECCCeEEEEECCCCceeEEeec
Q psy14440 465 KLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHG-HPVWDIKFSPHGYYFA-SAGHDRMARLWATDSYHPLRLFVG 542 (711)
Q Consensus 465 ~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~-~~V~~v~~sp~g~~l~-sgs~Dg~i~lwd~~~~~~~~~~~~ 542 (711)
++++++++.++++++.+++|++||+.+++.+..+..+. ..+..++|+++|++++ +++.++.|.+||+.+++.+..+..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 45678888899999999999999999999988887543 2577899999998655 555789999999999888776653
Q ss_pred CC------CCeeEEEEcCCCCEEEEEEcC------------CcEEEEECCCCcE---EEEeeCCCCCeEEEEEecCCCEE
Q psy14440 543 HY------SDVDCVQFHPNSNYVATGSSD------------RTIRLWDCVTGSH---VRLLTGHKAPVYALSFSVCGRFL 601 (711)
Q Consensus 543 h~------~~V~~v~~sp~~~~latgs~D------------g~I~iwD~~~~~~---v~~~~~h~~~I~~la~spdg~~L 601 (711)
+. ..+.+++|+|+|++|++++.+ +.|.+||+.+++. +..+.. ...+.+++|+++|+ +
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~-l 161 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAADDGS-L 161 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECTTSC-E
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CCcccceeECCCCc-E
Confidence 32 237899999999999998865 8999999988543 344443 34688999999999 6
Q ss_pred EEEeCCCcEEEEECCCCeEEEEeeCCC-----------------------------------------------------
Q psy14440 602 ASAGGDGNVHMWDLSNGHLLTLLTGHT----------------------------------------------------- 628 (711)
Q Consensus 602 asgs~Dg~I~iwDl~sg~~i~~l~~h~----------------------------------------------------- 628 (711)
++++. .|.+||+.+++.+..+..+.
T Consensus 162 ~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 239 (349)
T 1jmx_B 162 YVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVD 239 (349)
T ss_dssp EEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEE
T ss_pred EEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEe
Confidence 66544 49999999998877765331
Q ss_pred ---------------CCEEEEEEeC-CCCEEEEEeCCCcEEEEeCCC
Q psy14440 629 ---------------DVVRALCFSR-DGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 629 ---------------~~V~sl~fsp-dg~~Lasgs~Dg~V~iWdl~~ 659 (711)
..+.+++|++ +|++|+++ ++.|++||+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~ 284 (349)
T 1jmx_B 240 LKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQ 284 (349)
T ss_dssp TTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTT
T ss_pred ccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECcc
Confidence 1345677889 99999888 88999999875
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.77 E-value=1.4e-17 Score=193.75 Aligned_cols=242 Identities=14% Similarity=0.071 Sum_probs=177.1
Q ss_pred EecCCCceEEEEECCCCCEEEEE--eCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeeccc
Q psy14440 383 LLNARQQVTCAEISEDVSILAVG--FSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHE 460 (711)
Q Consensus 383 l~~h~~~V~~l~fs~dg~~LatG--~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~ 460 (711)
+.+|...|.+++|++++-+++.+ +.++...||..... ...+.+..|.
T Consensus 19 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~-------------------------------~~~~~l~~~~ 67 (662)
T 3azo_A 19 VASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRAD-------------------------------GAEESALPAP 67 (662)
T ss_dssp HHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTT-------------------------------SCEEESSCTT
T ss_pred HhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCC-------------------------------CCcceeCCCC
Confidence 34577889999999887777777 56788999985211 1122333333
Q ss_pred CCEE---------EEEEc--CCCCE-EEEEeC-CCeEEEEECC--C-CeEEEEEec-----CCCCEEEEEEcCCCCEEEE
Q psy14440 461 GPVR---------KLSFS--PDRSL-LLSCSQ-DNTIRLWSLL--L-WRCLVVYKG-----HGHPVWDIKFSPHGYYFAS 519 (711)
Q Consensus 461 ~~V~---------~l~fs--pdg~~-L~s~s~-Dg~V~iwdl~--t-~~~~~~~~~-----h~~~V~~v~~sp~g~~l~s 519 (711)
..+. ...|+ |||+. |+.++. +..|.+|++. . +. ...+.. |...+.+++|+|+|+.|++
T Consensus 68 ~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~ 146 (662)
T 3azo_A 68 WNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWC 146 (662)
T ss_dssp CCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEE
T ss_pred ccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEE
Confidence 3333 45555 99998 776654 5667777765 2 33 444544 6678899999999999999
Q ss_pred EECC----------CeEEEEECCC------CceeEEee-cCCCCeeEEEEcCCCCEEEEEEcCC--------cEEEEECC
Q psy14440 520 AGHD----------RMARLWATDS------YHPLRLFV-GHYSDVDCVQFHPNSNYVATGSSDR--------TIRLWDCV 574 (711)
Q Consensus 520 gs~D----------g~i~lwd~~~------~~~~~~~~-~h~~~V~~v~~sp~~~~latgs~Dg--------~I~iwD~~ 574 (711)
++.+ ..|++||+.+ +.. +.+. .+...+..++|+|||++|+.++.++ .|++||+.
T Consensus 147 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~ 225 (662)
T 3azo_A 147 MAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVT 225 (662)
T ss_dssp EEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEEC
T ss_pred EEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEEC
Confidence 9877 5899999988 544 4454 5567788899999999999888653 79999998
Q ss_pred -CC---cEEEEeeCCCCCeEEEEEecCCCEEEEEeCCC--cEEEEECCCCeEEEEeeCCCCC--------EEEEEEeCCC
Q psy14440 575 -TG---SHVRLLTGHKAPVYALSFSVCGRFLASAGGDG--NVHMWDLSNGHLLTLLTGHTDV--------VRALCFSRDG 640 (711)
Q Consensus 575 -~~---~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg--~I~iwDl~sg~~i~~l~~h~~~--------V~sl~fspdg 640 (711)
++ +......+|...+..++|+|||+++++++.+| .|.+||+.+++......++... +.+++|++++
T Consensus 226 ~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~ 305 (662)
T 3azo_A 226 EDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANG 305 (662)
T ss_dssp TTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTS
T ss_pred CCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCC
Confidence 57 55555556678999999999999888888888 6777777777765544433322 5678999999
Q ss_pred CEEEEEeCCCcEEEEeCC
Q psy14440 641 NILASSGQDCSVKLWDFA 658 (711)
Q Consensus 641 ~~Lasgs~Dg~V~iWdl~ 658 (711)
+++++++. ++++||.+.
T Consensus 306 ~~~~~~~~-~~~~l~~~d 322 (662)
T 3azo_A 306 LIAVVHGK-GAAVLGILD 322 (662)
T ss_dssp CEEEEEBS-SSCEEEEEE
T ss_pred EEEEEEEc-CccEEEEEE
Confidence 99999998 999999543
No 171
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.75 E-value=2.5e-17 Score=177.71 Aligned_cols=264 Identities=11% Similarity=-0.038 Sum_probs=186.2
Q ss_pred eEEEEECCCCCEEEEEeCC---CeEEEEeCCCCceeee-----------ccCccccccccccCCcEEEEEecCCCeeEEE
Q psy14440 390 VTCAEISEDVSILAVGFSE---SYIKLWSLVPQKLKAM-----------KSSDQLQDIEMECDDILVRIMDERNAETTRT 455 (711)
Q Consensus 390 V~~l~fs~dg~~LatG~~d---g~I~vWdl~~~~~~~~-----------~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 455 (711)
+.+++|||||++||.+... ..|.+|++.+++...+ .++++...++....++.+++|+..+++....
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~ 117 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVI 117 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence 7788999999998877553 4688889877654332 2345566677777777899999888876666
Q ss_pred eecccCCEEE-------------------EEEcCCCCEEEEE-----eCCCeEEEEECCCCeEEEEEecCCCCEEEEEEc
Q psy14440 456 LVGHEGPVRK-------------------LSFSPDRSLLLSC-----SQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFS 511 (711)
Q Consensus 456 l~~h~~~V~~-------------------l~fspdg~~L~s~-----s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~s 511 (711)
...+.+.... +.|+|+++.++.+ ..+..|++||+.+++..... .+...+..+.|+
T Consensus 118 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~s 196 (396)
T 3c5m_A 118 YTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYR 196 (396)
T ss_dssp EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEE
T ss_pred EecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceEC
Confidence 6555543333 3567777776654 35678999999988766555 467789999999
Q ss_pred C-CCCEEEEEECC------CeEEEEECCCCceeEEeecC-CCCeeEEEEcCCCCEEEEEEcC-----CcEEEEECCCCcE
Q psy14440 512 P-HGYYFASAGHD------RMARLWATDSYHPLRLFVGH-YSDVDCVQFHPNSNYVATGSSD-----RTIRLWDCVTGSH 578 (711)
Q Consensus 512 p-~g~~l~sgs~D------g~i~lwd~~~~~~~~~~~~h-~~~V~~v~~sp~~~~latgs~D-----g~I~iwD~~~~~~ 578 (711)
| ++..|+.++.+ ..|.+|+++.+......... ...+..++|+|+|++|+.++.+ +.|++||+.+++.
T Consensus 197 p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~ 276 (396)
T 3c5m_A 197 PFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLEN 276 (396)
T ss_dssp TTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCE
T ss_pred CCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCe
Confidence 9 78877776643 36888898766543333321 2357889999999988877654 4499999998876
Q ss_pred EEEeeCCCCCeEEEEEec-CCCEEEEEe----------------CCCcEEEEECCCCeEEEEeeCCCC-----------C
Q psy14440 579 VRLLTGHKAPVYALSFSV-CGRFLASAG----------------GDGNVHMWDLSNGHLLTLLTGHTD-----------V 630 (711)
Q Consensus 579 v~~~~~h~~~I~~la~sp-dg~~Lasgs----------------~Dg~I~iwDl~sg~~i~~l~~h~~-----------~ 630 (711)
....... + .. ++|++ ||++|++++ .++.|++||+.+++.. .+..+.. .
T Consensus 277 ~~l~~~~-~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~ 352 (396)
T 3c5m_A 277 EEVMVMP-P-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQIT 352 (396)
T ss_dssp EEEEECC-S-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-EEEECCCCCCCBTTBSSTT
T ss_pred EEeeeCC-C-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-EccCCCCccccccccccCC
Confidence 5443322 2 33 89999 999888765 3478999999888753 3444443 2
Q ss_pred EEEEEEeCCCCEEEEEeC-CCcEEEEeCC
Q psy14440 631 VRALCFSRDGNILASSGQ-DCSVKLWDFA 658 (711)
Q Consensus 631 V~sl~fspdg~~Lasgs~-Dg~V~iWdl~ 658 (711)
+..++|++||+.|+.++. ++...||.+.
T Consensus 353 ~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 353 HPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp CCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 567899999998887764 5666666553
No 172
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.73 E-value=8.7e-16 Score=160.02 Aligned_cols=231 Identities=15% Similarity=0.091 Sum_probs=175.6
Q ss_pred EEEecCCCceEEEEECCCCC-EEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecc
Q psy14440 381 YTLLNARQQVTCAEISEDVS-ILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGH 459 (711)
Q Consensus 381 ~tl~~h~~~V~~l~fs~dg~-~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h 459 (711)
..+..+.....+++|+++|+ +++++..++.|.+|+..+. ...+..+
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~---------------------------------~~~~~~~ 67 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ---------------------------------LSPEMHP 67 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC---------------------------------EEEEESS
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC---------------------------------eEEEECC
Confidence 34556667788999999998 8888888999999987532 2233446
Q ss_pred cCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecC----CCCEEEEEEcCCCCEEEEEEC-------------
Q psy14440 460 EGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGH----GHPVWDIKFSPHGYYFASAGH------------- 522 (711)
Q Consensus 460 ~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h----~~~V~~v~~sp~g~~l~sgs~------------- 522 (711)
.+.+.+++|+++|+++++...++.|.+||..+++........ ...+.+++++++|+++++.+.
T Consensus 68 ~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~ 147 (296)
T 3e5z_A 68 SHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGE 147 (296)
T ss_dssp CSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCC
T ss_pred CCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcccccccccccccc
Confidence 677899999999998877777789999999887765443321 234678999999998887321
Q ss_pred ----CCeEEEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECC-CCcE---EEEeeCCCCCeEEEEE
Q psy14440 523 ----DRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCV-TGSH---VRLLTGHKAPVYALSF 594 (711)
Q Consensus 523 ----Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~-~~~~---v~~~~~h~~~I~~la~ 594 (711)
.+.|..++.. + .+..+..+......++|+|+++.+++.+.++.|.+||+. +++. .+.+..+.+.+.++++
T Consensus 148 ~~~~~~~l~~~~~~-g-~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~ 225 (296)
T 3e5z_A 148 MELPGRWVFRLAPD-G-TLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRV 225 (296)
T ss_dssp CCSSSCEEEEECTT-S-CEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEE
T ss_pred ccCCCcEEEEECCC-C-CEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEE
Confidence 2455555554 3 345555677778999999999999777778999999987 5554 3444445566788999
Q ss_pred ecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEE-eCCCCEEEEEeCCC
Q psy14440 595 SVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCF-SRDGNILASSGQDC 650 (711)
Q Consensus 595 spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~f-spdg~~Lasgs~Dg 650 (711)
+++|+++++. ++.|.+||.. |+.+..+..+.. +.+++| +++++.|++++.++
T Consensus 226 d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~ 278 (296)
T 3e5z_A 226 DAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE 278 (296)
T ss_dssp BTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTE
T ss_pred CCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe
Confidence 9999876665 7899999986 888888887777 899999 58899999888764
No 173
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.73 E-value=6.7e-16 Score=164.02 Aligned_cols=252 Identities=9% Similarity=0.080 Sum_probs=178.6
Q ss_pred CceEEEEECCCCCEEEEEe---------CCCeEEEEeCCCCceee------eccCccccccccccC-----CcEEEEEec
Q psy14440 388 QQVTCAEISEDVSILAVGF---------SESYIKLWSLVPQKLKA------MKSSDQLQDIEMECD-----DILVRIMDE 447 (711)
Q Consensus 388 ~~V~~l~fs~dg~~LatG~---------~dg~I~vWdl~~~~~~~------~~~~~~~~~l~~~~~-----d~~i~i~d~ 447 (711)
..+...++ ||+.+|... .++.|.+|++.+++... ..+++++..++.... ...|.+|+.
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~ 92 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFIENATMPRISPDGKKIAFMRANEEKKVSEIWVADL 92 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEEESCEEEEECTTSSEEEEEEEETTTTEEEEEEEET
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEcccCCCeEECCCCCEEEEEEeccCCCcceEEEEEC
Confidence 34666777 888777642 25678889988765432 345566666665543 234777787
Q ss_pred CCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCC---------------------------CeEEEEECCCCeEEEEEec
Q psy14440 448 RNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQD---------------------------NTIRLWSLLLWRCLVVYKG 500 (711)
Q Consensus 448 ~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~D---------------------------g~V~iwdl~t~~~~~~~~~ 500 (711)
.+++.......+ . +.+++|+|||+.|+.++.+ ..|.+||+.+++.+..+..
T Consensus 93 ~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~ 170 (347)
T 2gop_A 93 ETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK 170 (347)
T ss_dssp TTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE
T ss_pred CCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC
Confidence 777655544433 4 9999999999998888642 5699999998887455544
Q ss_pred CCCCEEEEEEcCCCCEEEEEECCC-------eEEEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcC--------
Q psy14440 501 HGHPVWDIKFSPHGYYFASAGHDR-------MARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSD-------- 565 (711)
Q Consensus 501 h~~~V~~v~~sp~g~~l~sgs~Dg-------~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~D-------- 565 (711)
. .+..+.|+|+| ++++++.++ ...+|.+++++ .+.+..+ ..+..+ +|+|++|+.++.+
T Consensus 171 -~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~ 243 (347)
T 2gop_A 171 -P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK-EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEH 243 (347)
T ss_dssp -E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE-EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSS
T ss_pred -C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCc-eEEeccC-cceeeE--CCCCCEEEEEEccccCCcccc
Confidence 3 78899999999 777776542 44555444444 3444444 445444 9999999888754
Q ss_pred CcEEEEECCCCcEEEEeeCCCCCeEE-EEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEE
Q psy14440 566 RTIRLWDCVTGSHVRLLTGHKAPVYA-LSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILA 644 (711)
Q Consensus 566 g~I~iwD~~~~~~v~~~~~h~~~I~~-la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~La 644 (711)
..|.+|| +++......+|...+.. ++|+ || ++++++.++.++|| +.+++....+ .+.+.|.+++|++ .+++
T Consensus 244 ~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~-~~~~~v~~~~~s~--~~~~ 315 (347)
T 2gop_A 244 NKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIA-KGRHWIMGFDVDE--IVVY 315 (347)
T ss_dssp CEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEE-CSSSEEEEEEESS--SEEE
T ss_pred ceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEe-cCCCeEEeeeeeC--cEEE
Confidence 3688888 66655555566778886 9999 88 89999999999999 8777664444 4577899999998 6788
Q ss_pred EEeCCCcE-EEEeCC
Q psy14440 645 SSGQDCSV-KLWDFA 658 (711)
Q Consensus 645 sgs~Dg~V-~iWdl~ 658 (711)
+++.+++. +||.+.
T Consensus 316 ~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 316 LKETATRLRELFTWD 330 (347)
T ss_dssp EEECSSSCCEEEEES
T ss_pred EEcCCCChHHheEeC
Confidence 88777765 788775
No 174
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.73 E-value=7.2e-16 Score=166.35 Aligned_cols=240 Identities=10% Similarity=0.048 Sum_probs=164.8
Q ss_pred CcEEEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeC----------CCeEEEEECCCCeEEEEEecC------C
Q psy14440 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQ----------DNTIRLWSLLLWRCLVVYKGH------G 502 (711)
Q Consensus 439 d~~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~----------Dg~V~iwdl~t~~~~~~~~~h------~ 502 (711)
++.+++||..+++....+..+.++ .++|+|||++|++++. +++|.+||..+++.+..+... .
T Consensus 30 d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g 107 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGL 107 (361)
T ss_dssp GCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBC
T ss_pred cCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccC
Confidence 345555555566666666666665 8999999999999863 678999999999988887643 2
Q ss_pred CCEEEEEEcCCCCEEEEEEC--CCeEEEEECCCCceeEE-eecCCCCeeEEEEcCCC-CEEEEEEcCCcEEEEECCC-Cc
Q psy14440 503 HPVWDIKFSPHGYYFASAGH--DRMARLWATDSYHPLRL-FVGHYSDVDCVQFHPNS-NYVATGSSDRTIRLWDCVT-GS 577 (711)
Q Consensus 503 ~~V~~v~~sp~g~~l~sgs~--Dg~i~lwd~~~~~~~~~-~~~h~~~V~~v~~sp~~-~~latgs~Dg~I~iwD~~~-~~ 577 (711)
.....++++|+|++++++.. +++|.+||+.+++.+.. +.. .. ...+.+.|++ ..+++.+.||.+.+|++.. ++
T Consensus 108 ~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~ 185 (361)
T 2oiz_A 108 NYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA-AG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGK 185 (361)
T ss_dssp CCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG-TT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSS
T ss_pred CCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC-CC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCc
Confidence 44667999999999998874 68999999999887776 432 11 1123344433 3444455555555555432 22
Q ss_pred EE-------------------------------------------------EEeeC------CC----CCeEEEEEecCC
Q psy14440 578 HV-------------------------------------------------RLLTG------HK----APVYALSFSVCG 598 (711)
Q Consensus 578 ~v-------------------------------------------------~~~~~------h~----~~I~~la~spdg 598 (711)
.. ..+.. +. .....++|++++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg 265 (361)
T 2oiz_A 186 VASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRAS 265 (361)
T ss_dssp EEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTT
T ss_pred EeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCC
Confidence 11 01000 00 001126889998
Q ss_pred CEEEEEeC-----------CCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCCccCcc
Q psy14440 599 RFLASAGG-----------DGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTE 667 (711)
Q Consensus 599 ~~Lasgs~-----------Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~~~~~ 667 (711)
+.++++.. .+.|.+||+.+++.+..+..+. +.+++|++||++|++++. ++|.|||..+..
T Consensus 266 ~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~------ 336 (361)
T 2oiz_A 266 GRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPE------ 336 (361)
T ss_dssp TEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSS------
T ss_pred CeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCc------
Confidence 88877643 3489999999999999999877 899999999999998886 999999987531
Q ss_pred ccccccccccccccccceeeecccCCcceEEEEEccCCe
Q psy14440 668 EVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNI 706 (711)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~ 706 (711)
...+.++.........+.|+|+|.
T Consensus 337 ---------------l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 337 ---------------PKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp ---------------CEEEEEETTSCSSEEEEEECCCSC
T ss_pred ---------------ceeeEEeccCCCCcEEEEecCCCC
Confidence 133444444455567888888874
No 175
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.73 E-value=2.3e-16 Score=170.17 Aligned_cols=215 Identities=12% Similarity=0.031 Sum_probs=166.5
Q ss_pred EecCCCeeEEEeecccCCEEE-----EEEcCCCCEEEEEeC-CC--eEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCE
Q psy14440 445 MDERNAETTRTLVGHEGPVRK-----LSFSPDRSLLLSCSQ-DN--TIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYY 516 (711)
Q Consensus 445 ~d~~~~~~~~~l~~h~~~V~~-----l~fspdg~~L~s~s~-Dg--~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~ 516 (711)
++..++.....+..|.+.+.. .+|||||++|+.++. +| .|.+||+.+++......++...+.++.|+|+|+.
T Consensus 15 ~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~ 94 (388)
T 3pe7_A 15 QDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDA 94 (388)
T ss_dssp ECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSE
T ss_pred ecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCE
Confidence 456677788888888877776 899999999998887 66 4888999999888877777766667889999999
Q ss_pred EEEEECCCeEEEEECCCCceeEEeecCCCCeeEEE--EcCCCCEEEEEE----------------------cCCcEEEEE
Q psy14440 517 FASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQ--FHPNSNYVATGS----------------------SDRTIRLWD 572 (711)
Q Consensus 517 l~sgs~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~--~sp~~~~latgs----------------------~Dg~I~iwD 572 (711)
|++++.++.+++||+.+++....+..+...+.... +++++.+++... .++.|.+||
T Consensus 95 l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 174 (388)
T 3pe7_A 95 LFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVD 174 (388)
T ss_dssp EEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEE
T ss_pred EEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEE
Confidence 99999999999999999988777776666554444 488999887532 346799999
Q ss_pred CCCCcEEEEeeCCCCCeEEEEEec-CCCEEEEEeCC------CcEEEEECCCCeEEEEeeCCC--CCEEEEEEeCCCCEE
Q psy14440 573 CVTGSHVRLLTGHKAPVYALSFSV-CGRFLASAGGD------GNVHMWDLSNGHLLTLLTGHT--DVVRALCFSRDGNIL 643 (711)
Q Consensus 573 ~~~~~~v~~~~~h~~~I~~la~sp-dg~~Lasgs~D------g~I~iwDl~sg~~i~~l~~h~--~~V~sl~fspdg~~L 643 (711)
+.+++... +..+...+..++|+| ||+.|+.++.+ ..|.++|+..++. ..+..+. ..+..++|+|||+.|
T Consensus 175 ~~~g~~~~-l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l 252 (388)
T 3pe7_A 175 LKTGESTV-ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSAL 252 (388)
T ss_dssp TTTCCEEE-EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCE
T ss_pred CCCCceEE-eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEE
Confidence 99987544 445677899999999 99999877653 3788888876554 3344343 357889999999977
Q ss_pred EEEeC-CC----cEEEEeCCCCC
Q psy14440 644 ASSGQ-DC----SVKLWDFAKLS 661 (711)
Q Consensus 644 asgs~-Dg----~V~iWdl~~~~ 661 (711)
+..+. ++ .|++||+....
T Consensus 253 ~~~~~~~~~~~~~l~~~d~~~g~ 275 (388)
T 3pe7_A 253 VYVSYLKGSPDRFIYSADPETLE 275 (388)
T ss_dssp EEEEEETTCCCEEEEEECTTTCC
T ss_pred EEEecCCCCCcceEEEEecCCCc
Confidence 65443 22 39999997643
No 176
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.73 E-value=8e-16 Score=180.91 Aligned_cols=243 Identities=11% Similarity=0.031 Sum_probs=179.2
Q ss_pred CCCceEEEEECCCCCEEEEEeCCC-----eEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeeccc
Q psy14440 386 ARQQVTCAEISEDVSILAVGFSES-----YIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHE 460 (711)
Q Consensus 386 h~~~V~~l~fs~dg~~LatG~~dg-----~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~ 460 (711)
|...+.+++|||||++||.+..++ .|++||+.+++ .......+
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~-------------------------------~~~~~~~~- 170 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAK-------------------------------ELPDVLER- 170 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTE-------------------------------EEEEEEEE-
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC-------------------------------CCcccccC-
Confidence 334688999999999999876643 67777775443 22211111
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCe----------------EEEEECCCCeE--EEEEec--CCCCEEEEEEcCCCCEEEEE
Q psy14440 461 GPVRKLSFSPDRSLLLSCSQDNT----------------IRLWSLLLWRC--LVVYKG--HGHPVWDIKFSPHGYYFASA 520 (711)
Q Consensus 461 ~~V~~l~fspdg~~L~s~s~Dg~----------------V~iwdl~t~~~--~~~~~~--h~~~V~~v~~sp~g~~l~sg 520 (711)
..+.+++|+|||+.|+.++.++. |++|++.++.. ...+.. |...+.++.|+|+|++|+.+
T Consensus 171 ~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~ 250 (710)
T 2xdw_A 171 VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLS 250 (710)
T ss_dssp ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEE
T ss_pred cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEE
Confidence 22567999999999999988766 99999987652 233333 45568899999999999887
Q ss_pred EC-----CCeEEEEECCC------Cc-eeEEeecCCCCeeEEEEcCCCCEEEEEEcC----CcEEEEECCCCc--EEEEe
Q psy14440 521 GH-----DRMARLWATDS------YH-PLRLFVGHYSDVDCVQFHPNSNYVATGSSD----RTIRLWDCVTGS--HVRLL 582 (711)
Q Consensus 521 s~-----Dg~i~lwd~~~------~~-~~~~~~~h~~~V~~v~~sp~~~~latgs~D----g~I~iwD~~~~~--~v~~~ 582 (711)
+. +..|++||+.+ +. ..+.+..+...+.. .|+++|+.|+..+.+ +.|.+||+.++. ..+.+
T Consensus 251 ~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l 329 (710)
T 2xdw_A 251 IREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVL 329 (710)
T ss_dssp EECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEE
T ss_pred EEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceec
Confidence 75 67899999986 43 45666666666655 488899988877653 359999998874 23455
Q ss_pred eCCCC--CeEEEEEecCCCEEEEEeCCC--cEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEE-e---CCCcEEE
Q psy14440 583 TGHKA--PVYALSFSVCGRFLASAGGDG--NVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASS-G---QDCSVKL 654 (711)
Q Consensus 583 ~~h~~--~I~~la~spdg~~Lasgs~Dg--~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasg-s---~Dg~V~i 654 (711)
..|.. .+..++|++++.+++++..|+ .|.+||+.+|+.+..+..+.+.|.++++++++..|+.. + ..++|.+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~ 409 (710)
T 2xdw_A 330 VPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYH 409 (710)
T ss_dssp ECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEE
T ss_pred cCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEE
Confidence 55544 688899998888888888887 46677887888888888888889999999998766533 2 3478999
Q ss_pred EeCCCCC
Q psy14440 655 WDFAKLS 661 (711)
Q Consensus 655 Wdl~~~~ 661 (711)
||+.+..
T Consensus 410 ~d~~tg~ 416 (710)
T 2xdw_A 410 CDLTKEE 416 (710)
T ss_dssp EETTSSS
T ss_pred EECCCCc
Confidence 9997644
No 177
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.72 E-value=5.1e-16 Score=180.44 Aligned_cols=198 Identities=13% Similarity=0.059 Sum_probs=148.3
Q ss_pred ccCCEEEEEEcCCCCEEEEEeCC----------CeEEEEECCC------CeEEEEEe-cCCCCEEEEEEcCCCCEEEEEE
Q psy14440 459 HEGPVRKLSFSPDRSLLLSCSQD----------NTIRLWSLLL------WRCLVVYK-GHGHPVWDIKFSPHGYYFASAG 521 (711)
Q Consensus 459 h~~~V~~l~fspdg~~L~s~s~D----------g~V~iwdl~t------~~~~~~~~-~h~~~V~~v~~sp~g~~l~sgs 521 (711)
|...+.+++|||||+.|++++.| .+|++||+.+ ++.. .+. .+...+..++|+|+|++|+.++
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~SpDG~~la~~~ 206 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDDAHRFVTGPRLSPDGRQAVWLA 206 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCSCSSEECCCEECTTSSEEEEEE
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-EEEecCCCcccCceECCCCCEEEEEE
Confidence 56778999999999999998877 5899999987 5543 344 5566788899999999999887
Q ss_pred CC--------CeEEEEECC-CC---ceeEEeecCCCCeeEEEEcCCCCEEEEEEcCC--cEEEEECCCCcEEEEeeCCCC
Q psy14440 522 HD--------RMARLWATD-SY---HPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR--TIRLWDCVTGSHVRLLTGHKA 587 (711)
Q Consensus 522 ~D--------g~i~lwd~~-~~---~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg--~I~iwD~~~~~~v~~~~~h~~ 587 (711)
.+ ..|++||++ ++ +......+|...+..++|+|||+++++++.++ .|.+||+.+++......++..
T Consensus 207 ~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~ 286 (662)
T 3azo_A 207 WDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEE 286 (662)
T ss_dssp ECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSB
T ss_pred CCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccccccc
Confidence 55 379999999 56 44555556678899999999999888887788 677777767776554443332
Q ss_pred C--------eEEEEEecCCCEEEEEeCCCcEEEE--ECCCCeEEEEeeCCCCCEEEE-EEeCCCCEEEEEeCCCcEEEE-
Q psy14440 588 P--------VYALSFSVCGRFLASAGGDGNVHMW--DLSNGHLLTLLTGHTDVVRAL-CFSRDGNILASSGQDCSVKLW- 655 (711)
Q Consensus 588 ~--------I~~la~spdg~~Lasgs~Dg~I~iw--Dl~sg~~i~~l~~h~~~V~sl-~fspdg~~Lasgs~Dg~V~iW- 655 (711)
. +.+++|+++++++++++. +.++|| |+.+++ +..+..|.+.+..+ +++.+.-++++++.+....||
T Consensus 287 ~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~ 364 (662)
T 3azo_A 287 FAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVE 364 (662)
T ss_dssp SSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEE
T ss_pred ccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEE
Confidence 2 567899999999999998 999999 666665 67788888888877 555443345555666544444
Q ss_pred -eCCC
Q psy14440 656 -DFAK 659 (711)
Q Consensus 656 -dl~~ 659 (711)
|+.+
T Consensus 365 ~d~~~ 369 (662)
T 3azo_A 365 LDTVT 369 (662)
T ss_dssp EETTT
T ss_pred EECCC
Confidence 5544
No 178
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.71 E-value=3.1e-15 Score=158.87 Aligned_cols=225 Identities=12% Similarity=0.149 Sum_probs=173.1
Q ss_pred cCCEEEEEEcCCCCEEEEEeCC------------------------CeEEEEECCCCeEEEEEe-cCCCCEEEEEEcCCC
Q psy14440 460 EGPVRKLSFSPDRSLLLSCSQD------------------------NTIRLWSLLLWRCLVVYK-GHGHPVWDIKFSPHG 514 (711)
Q Consensus 460 ~~~V~~l~fspdg~~L~s~s~D------------------------g~V~iwdl~t~~~~~~~~-~h~~~V~~v~~sp~g 514 (711)
-+.+.+++++++|+++++.+.+ ++|.+||..+++.+..+. ++......++++++|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4679999999999988888777 479999999888877665 345678999999999
Q ss_pred CEEEEEECCCeEEEEECCCCc-eeEEe---------ecCCCCeeEEEEcC-CCCEEEEEE-cCCcEEEEECCCCcEEEEe
Q psy14440 515 YYFASAGHDRMARLWATDSYH-PLRLF---------VGHYSDVDCVQFHP-NSNYVATGS-SDRTIRLWDCVTGSHVRLL 582 (711)
Q Consensus 515 ~~l~sgs~Dg~i~lwd~~~~~-~~~~~---------~~h~~~V~~v~~sp-~~~~latgs-~Dg~I~iwD~~~~~~v~~~ 582 (711)
+++++.+.++.|++|+.+... .+..+ .++......+++++ +++++++.+ .++.|++|| .+|+.+..+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~ 181 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQW 181 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEe
Confidence 988888889999999987542 45555 34555789999999 788888886 699999999 677777776
Q ss_pred eCC----------CCCeEEEEEecC-CCEEEEEeCCCcEEEEECCCCeEEEEee--CCCCCEEEEEEeCCCCEEEE----
Q psy14440 583 TGH----------KAPVYALSFSVC-GRFLASAGGDGNVHMWDLSNGHLLTLLT--GHTDVVRALCFSRDGNILAS---- 645 (711)
Q Consensus 583 ~~h----------~~~I~~la~spd-g~~Lasgs~Dg~I~iwDl~sg~~i~~l~--~h~~~V~sl~fspdg~~Las---- 645 (711)
... -.....++++++ |+++++...+++|++||..+|+.+..+. .+...+.+++|+| +..+++
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~ 260 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKP 260 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCC
T ss_pred ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCE
Confidence 432 234899999998 7777777788999999999899998884 4567789999999 433333
Q ss_pred ---EeCCCcEEEEeCCCCCCccCccccccccccccccccccceeeec---ccCCcceEEEEEccCCeeee
Q psy14440 646 ---SGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSY---KTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 646 ---gs~Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~t~~~pV~~v~Fs~~n~lla 709 (711)
.+.+++|++||+.+.. .+..+ ..+...+.+|+|+++|.+++
T Consensus 261 ~v~~~~~~~v~~~~~~~g~-----------------------~~~~~~~~~~~~~~p~~ia~~~dG~lyv 307 (329)
T 3fvz_A 261 YFGDQEPVQGFVMNFSSGE-----------------------IIDVFKPVRKHFDMPHDIVASEDGTVYI 307 (329)
T ss_dssp CTTCSCCCCEEEEETTTCC-----------------------EEEEECCSSSCCSSEEEEEECTTSEEEE
T ss_pred EeccCCCcEEEEEEcCCCe-----------------------EEEEEcCCCCccCCeeEEEECCCCCEEE
Confidence 3345589999986422 22222 24455678999999986554
No 179
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.70 E-value=2e-16 Score=187.03 Aligned_cols=233 Identities=11% Similarity=0.104 Sum_probs=171.0
Q ss_pred eccCccccccccccCCcEEEEEecCCCeeEEEeecccCC-----EEEEEEcCCCCEEEEEeCC---------CeEEEEEC
Q psy14440 424 MKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGP-----VRKLSFSPDRSLLLSCSQD---------NTIRLWSL 489 (711)
Q Consensus 424 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~-----V~~l~fspdg~~L~s~s~D---------g~V~iwdl 489 (711)
+.+..+...++.+ ++.|++||..+++....+.+|... ...++|||||++|+.++.+ +.+.+||+
T Consensus 22 ~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~ 99 (740)
T 4a5s_A 22 LRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDL 99 (740)
T ss_dssp EEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred cEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEEC
Confidence 3444455445443 789999999999988888887643 2447899999999998876 55679999
Q ss_pred CCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEee-cCCC-----------------CeeEEE
Q psy14440 490 LLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFV-GHYS-----------------DVDCVQ 551 (711)
Q Consensus 490 ~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~-~h~~-----------------~V~~v~ 551 (711)
.+++... +..|...+..++|||+|+.||.++ |+.|++|+..++...+... ++.. ....+.
T Consensus 100 ~~~~~~~-l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~ 177 (740)
T 4a5s_A 100 NKRQLIT-EERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALW 177 (740)
T ss_dssp TTTEECC-SSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEE
T ss_pred CCCcEEE-cccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceE
Confidence 9988653 556778899999999999999885 7899999998877655322 2222 223589
Q ss_pred EcCCCCEEEEEEcCC------------------------------------cEEEEECCC---C---cEEEEee-----C
Q psy14440 552 FHPNSNYVATGSSDR------------------------------------TIRLWDCVT---G---SHVRLLT-----G 584 (711)
Q Consensus 552 ~sp~~~~latgs~Dg------------------------------------~I~iwD~~~---~---~~v~~~~-----~ 584 (711)
|+|||++||.++.|. +|++||+.+ + +...... +
T Consensus 178 wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~ 257 (740)
T 4a5s_A 178 WSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLI 257 (740)
T ss_dssp ECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHT
T ss_pred ECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCC
Confidence 999999999886432 488899988 7 4333322 3
Q ss_pred CCCCeEEEEEecCCCEEEEEeC----CCcEEEEECCCCe----EEE--Ee--eCCCCCEE-----EEEEeCCCCEEE-EE
Q psy14440 585 HKAPVYALSFSVCGRFLASAGG----DGNVHMWDLSNGH----LLT--LL--TGHTDVVR-----ALCFSRDGNILA-SS 646 (711)
Q Consensus 585 h~~~I~~la~spdg~~Lasgs~----Dg~I~iwDl~sg~----~i~--~l--~~h~~~V~-----sl~fspdg~~La-sg 646 (711)
|...+..++|||||++++.... +..|++||+.+|+ +.. .+ .+|.+.|. +.+|+|||+.|+ ..
T Consensus 258 ~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~ 337 (740)
T 4a5s_A 258 GDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKII 337 (740)
T ss_dssp SCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEE
T ss_pred CCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEE
Confidence 7788999999999997765532 3479999999887 221 11 44655544 789999999877 66
Q ss_pred eC-CC--cEEEEeCCCC
Q psy14440 647 GQ-DC--SVKLWDFAKL 660 (711)
Q Consensus 647 s~-Dg--~V~iWdl~~~ 660 (711)
+. +| .|++||+...
T Consensus 338 s~~~G~~~l~~~~~~~~ 354 (740)
T 4a5s_A 338 SNEEGYRHICYFQIDKK 354 (740)
T ss_dssp ECTTSCEEEEEEETTCS
T ss_pred EcCCCceEEEEEECCCC
Confidence 53 44 5888887653
No 180
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.70 E-value=2.4e-14 Score=151.37 Aligned_cols=238 Identities=12% Similarity=0.081 Sum_probs=173.7
Q ss_pred EEEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeec
Q psy14440 379 ACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVG 458 (711)
Q Consensus 379 ~~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~ 458 (711)
....+..+...+.+++|+++|++++++..++.|.+|+..+.++. .....
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~-------------------------------~~~~~ 84 (333)
T 2dg1_A 36 PWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIK-------------------------------RPFVS 84 (333)
T ss_dssp EEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE-------------------------------EEEEC
T ss_pred eeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEE-------------------------------EEeeC
Confidence 45567777788999999999998888888999999988654322 11123
Q ss_pred ccCCEEEEEEcCCCCEEEEEeCC----CeEEEEECCCCeEEEEEe--cCCCCEEEEEEcCCCCEEEEEEC------CCeE
Q psy14440 459 HEGPVRKLSFSPDRSLLLSCSQD----NTIRLWSLLLWRCLVVYK--GHGHPVWDIKFSPHGYYFASAGH------DRMA 526 (711)
Q Consensus 459 h~~~V~~l~fspdg~~L~s~s~D----g~V~iwdl~t~~~~~~~~--~h~~~V~~v~~sp~g~~l~sgs~------Dg~i 526 (711)
+...+.+++|+++|++++++..+ +.|.+||..++.....+. .+...+.+++++++|+++++... .+.|
T Consensus 85 ~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l 164 (333)
T 2dg1_A 85 HKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGV 164 (333)
T ss_dssp SSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEE
T ss_pred CCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceE
Confidence 45679999999999888777666 689999998776554443 24567999999999987776654 3556
Q ss_pred EEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEE-EcCCcEEEEECCC-CcEEEE--------eeCCCCCeEEEEEec
Q psy14440 527 RLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATG-SSDRTIRLWDCVT-GSHVRL--------LTGHKAPVYALSFSV 596 (711)
Q Consensus 527 ~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latg-s~Dg~I~iwD~~~-~~~v~~--------~~~h~~~I~~la~sp 596 (711)
..|+.++++... +..+...+.+++|++++++|+++ +.++.|.+||+.+ +..+.. +.++ ..+..+++++
T Consensus 165 ~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~ 242 (333)
T 2dg1_A 165 YYVSPDFRTVTP-IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDS 242 (333)
T ss_dssp EEECTTSCCEEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBT
T ss_pred EEEeCCCCEEEE-eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECC
Confidence 666665544433 33334568899999999876555 4578999999964 332221 1222 4678899999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCC------CEEEEEEeCCCCEEEEEeCCC
Q psy14440 597 CGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTD------VVRALCFSRDGNILASSGQDC 650 (711)
Q Consensus 597 dg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~------~V~sl~fspdg~~Lasgs~Dg 650 (711)
+|+++++...++.|.+||. +++.+..+..+.. .+.+++|++|++.|+.++.++
T Consensus 243 ~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 243 DDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp TCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred CCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 9998888878899999998 5777777765433 688999999987776666553
No 181
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.70 E-value=2.9e-15 Score=153.09 Aligned_cols=239 Identities=8% Similarity=-0.022 Sum_probs=174.9
Q ss_pred ceEEEEECCCCCEEE-EEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEEEE
Q psy14440 389 QVTCAEISEDVSILA-VGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLS 467 (711)
Q Consensus 389 ~V~~l~fs~dg~~La-tG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~ 467 (711)
...+++++++|++++ +...++.|.+|+..+..... ....+...+.+++
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~-------------------------------~~~~~~~~p~~i~ 73 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTV-------------------------------LPFNGLYQPQGLA 73 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EE-------------------------------CCCCSCCSCCCEE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccce-------------------------------EeeCCcCCcceeE
Confidence 778999999999777 54677889999864322110 0012234577899
Q ss_pred EcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEeecCCCCe
Q psy14440 468 FSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDV 547 (711)
Q Consensus 468 fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~~~V 547 (711)
++++|+.+++.. ++.|.+||................+.+++++++|+.+++...++.|.+|+..+.............+
T Consensus 74 ~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p 152 (270)
T 1rwi_B 74 VDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDP 152 (270)
T ss_dssp ECTTCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSC
T ss_pred ECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCc
Confidence 999998666555 8899999987654432222233678999999999988887788999999776554433333344568
Q ss_pred eEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCC
Q psy14440 548 DCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGH 627 (711)
Q Consensus 548 ~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h 627 (711)
.+++++++++.+++...++.|.+||...+........+...+.+++++++|.++++...++.|.+||............+
T Consensus 153 ~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~ 232 (270)
T 1rwi_B 153 DGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTG 232 (270)
T ss_dssp CCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCS
T ss_pred eeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCC
Confidence 89999999997777777889999998877654443344467899999999987777777889999998765443322233
Q ss_pred CCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 628 TDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 628 ~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
...+.+++++++|+++++.+.+++|++|++..
T Consensus 233 ~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 233 LNTPLAVAVDSDRTVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp CSCEEEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred CCCceeEEECCCCCEEEEECCCCEEEEEcCCC
Confidence 45789999999999989988999999999865
No 182
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.70 E-value=2e-14 Score=151.92 Aligned_cols=205 Identities=13% Similarity=0.068 Sum_probs=153.7
Q ss_pred eEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECC----CeEE
Q psy14440 452 TTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHD----RMAR 527 (711)
Q Consensus 452 ~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~D----g~i~ 527 (711)
....+..+...+.+++|+++|++++++..++.|.+||..+++.......+...+.+++|+++|++++++..+ +.|.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~ 115 (333)
T 2dg1_A 36 PWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIF 115 (333)
T ss_dssp EEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEE
T ss_pred eeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEE
Confidence 344556677778999999999987888889999999998887766554567789999999999888877766 6899
Q ss_pred EEECCCCceeEEee--cCCCCeeEEEEcCCCCEEEEEEc------CCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCC
Q psy14440 528 LWATDSYHPLRLFV--GHYSDVDCVQFHPNSNYVATGSS------DRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGR 599 (711)
Q Consensus 528 lwd~~~~~~~~~~~--~h~~~V~~v~~sp~~~~latgs~------Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~ 599 (711)
+||.+++.....+. .+...+.+++++++|+++++... .+.|..||..+++.... ..+...+..++|+++|+
T Consensus 116 ~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~i~~~~dg~ 194 (333)
T 2dg1_A 116 AATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI-IQNISVANGIALSTDEK 194 (333)
T ss_dssp EECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE-EEEESSEEEEEECTTSS
T ss_pred EEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe-ecCCCcccceEECCCCC
Confidence 99998876553433 24567899999999988776653 35566777665554333 33345578999999998
Q ss_pred EEEEE-eCCCcEEEEECCC-CeEEE--------EeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCC
Q psy14440 600 FLASA-GGDGNVHMWDLSN-GHLLT--------LLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFA 658 (711)
Q Consensus 600 ~Lasg-s~Dg~I~iwDl~s-g~~i~--------~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~ 658 (711)
+|+.+ +.++.|.+||+.+ +..+. .+.++ ..+..++++++|+++++...++.|.+||..
T Consensus 195 ~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 195 VLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp EEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred EEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCC
Confidence 66554 5678999999963 33221 11222 467899999999988888888999999874
No 183
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.69 E-value=5.3e-15 Score=157.07 Aligned_cols=201 Identities=12% Similarity=0.133 Sum_probs=150.4
Q ss_pred CcEEEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCC---C--eEEEEECCCCeEEEEEecCCCCEEEEEEcCC
Q psy14440 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQD---N--TIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513 (711)
Q Consensus 439 d~~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~D---g--~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~ 513 (711)
++.+.+|+..+++.. .+ ..+.+++|||||++|+.++.+ + .|.+|++.+++.......+. +.+++|+|+
T Consensus 42 ~~~l~~~d~~~~~~~-~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~--~~~~~wspd 114 (347)
T 2gop_A 42 ENTIVIENLKNNARR-FI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN--IRSLEWNED 114 (347)
T ss_dssp EEEEEEEETTTCCEE-EE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE--EEEEEECTT
T ss_pred cceEEEEeCCCCceE-Ec----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC--ccceeECCC
Confidence 567888998877643 33 568899999999999887754 3 48888998888766665443 999999999
Q ss_pred CCEEEEEECC---------------------------CeEEEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCC
Q psy14440 514 GYYFASAGHD---------------------------RMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566 (711)
Q Consensus 514 g~~l~sgs~D---------------------------g~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg 566 (711)
|+.|+.++.+ ..|++||+.+++.++.+.. . .+..++|+|+| ++++++.++
T Consensus 115 g~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~ 191 (347)
T 2gop_A 115 SRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHRE 191 (347)
T ss_dssp SSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCC
T ss_pred CCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEeccc
Confidence 9998888742 5789999998876455544 3 78999999999 777776542
Q ss_pred -------cEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCC--------CcEEEEECCCCeEEEEeeCCCCCE
Q psy14440 567 -------TIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGD--------GNVHMWDLSNGHLLTLLTGHTDVV 631 (711)
Q Consensus 567 -------~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~D--------g~I~iwDl~sg~~i~~l~~h~~~V 631 (711)
...||.+.+++. +.+..+ ..+.++ +|||++|+.++.+ +.|.+|| +++......+|...+
T Consensus 192 ~~~~~~~~~~l~~~d~~~~-~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~ 265 (347)
T 2gop_A 192 IIPQYFKFWDIYIWEDGKE-EKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGV 265 (347)
T ss_dssp SSCCSSCCEEEEEEETTEE-EEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEE
T ss_pred ccccccccccEEEeCCCce-EEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCccc
Confidence 344544445554 444444 555554 9999998877754 3688888 666655556667788
Q ss_pred EE-EEEeCCCCEEEEEeCCCcEEEEeCC
Q psy14440 632 RA-LCFSRDGNILASSGQDCSVKLWDFA 658 (711)
Q Consensus 632 ~s-l~fspdg~~Lasgs~Dg~V~iWdl~ 658 (711)
.. +.|+ || ++++++.++.++|| +.
T Consensus 266 ~~~~~~s-dg-~~~~~~~~~~~~l~-~~ 290 (347)
T 2gop_A 266 GQAKIKD-GK-VYFTLFEEGSVNLY-IW 290 (347)
T ss_dssp EEEEEET-TE-EEEEEEETTEEEEE-EE
T ss_pred CCccEEc-Cc-EEEEEecCCcEEEE-Ec
Confidence 86 9999 88 99999999999999 86
No 184
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.68 E-value=2.6e-14 Score=147.78 Aligned_cols=197 Identities=10% Similarity=0.148 Sum_probs=155.7
Q ss_pred cccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEe------cCCCCEEEEEE-cCCCCEEEEEEC-CCeEEEE
Q psy14440 458 GHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYK------GHGHPVWDIKF-SPHGYYFASAGH-DRMARLW 529 (711)
Q Consensus 458 ~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~------~h~~~V~~v~~-sp~g~~l~sgs~-Dg~i~lw 529 (711)
++-..+.+++++++++++++.+.++.|.+||.. ++.+..+. ++...+.++++ .++++++++... ++.|++|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 455678999999999988888889999999987 56666654 23457899999 467766666543 8999999
Q ss_pred ECCCCceeEEee-cCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEee--CCCCCeEEEEEecCCCEEEEEeC
Q psy14440 530 ATDSYHPLRLFV-GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLT--GHKAPVYALSFSVCGRFLASAGG 606 (711)
Q Consensus 530 d~~~~~~~~~~~-~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~--~h~~~I~~la~spdg~~Lasgs~ 606 (711)
| .+++.+..+. .+...+.+++++++++++++.+.++.|.+||. .++.+..+. ++...+.+++++++|+++++...
T Consensus 106 d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~ 183 (286)
T 1q7f_A 106 N-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNR 183 (286)
T ss_dssp C-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGG
T ss_pred C-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEEEEECC
Confidence 9 4566666654 34567899999999998888778899999995 466666664 34567899999999998888888
Q ss_pred CCcEEEEECCCCeEEEEeeCC--CCCEEEEEEeCCCCEEEEEeCCC-cEEEEeCC
Q psy14440 607 DGNVHMWDLSNGHLLTLLTGH--TDVVRALCFSRDGNILASSGQDC-SVKLWDFA 658 (711)
Q Consensus 607 Dg~I~iwDl~sg~~i~~l~~h--~~~V~sl~fspdg~~Lasgs~Dg-~V~iWdl~ 658 (711)
++.|++||. +++.+..+..+ ...+.+++++++|+++++...++ .|++||..
T Consensus 184 ~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 184 AHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp GTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT
T ss_pred CCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC
Confidence 899999997 56677777544 36789999999999999888886 99999853
No 185
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.68 E-value=6.5e-16 Score=166.59 Aligned_cols=232 Identities=8% Similarity=-0.039 Sum_probs=163.2
Q ss_pred eccCcccccccccc---CCcEEEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEec
Q psy14440 424 MKSSDQLQDIEMEC---DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKG 500 (711)
Q Consensus 424 ~~~~~~~~~l~~~~---~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~ 500 (711)
...++++..++... ....+.+|+..+++......++......+.|+|||++|+.++.++.|++||+.+++....+..
T Consensus 41 ~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~ 120 (396)
T 3c5m_A 41 KCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTV 120 (396)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred CcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEec
Confidence 34455555555443 234788889888775444333333333488999999999999999999999998887777665
Q ss_pred CCCCEEE-------------------EEEcCCCCEEEEE-----ECCCeEEEEECCCCceeEEeecCCCCeeEEEEcC-C
Q psy14440 501 HGHPVWD-------------------IKFSPHGYYFASA-----GHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHP-N 555 (711)
Q Consensus 501 h~~~V~~-------------------v~~sp~g~~l~sg-----s~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp-~ 555 (711)
+.....+ +.|+|+++.++.+ ..+..|++||+.+++..... .+...+..+.|+| +
T Consensus 121 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~d 199 (396)
T 3c5m_A 121 DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFD 199 (396)
T ss_dssp CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTE
T ss_pred ccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCC
Confidence 5543333 3567777766554 35678999999988765554 5667899999999 7
Q ss_pred CCEEEEEEcC------CcEEEEECCCCcEEEEeeCC--CCCeEEEEEecCCCEEEEEeCC-----CcEEEEECCCCeEEE
Q psy14440 556 SNYVATGSSD------RTIRLWDCVTGSHVRLLTGH--KAPVYALSFSVCGRFLASAGGD-----GNVHMWDLSNGHLLT 622 (711)
Q Consensus 556 ~~~latgs~D------g~I~iwD~~~~~~v~~~~~h--~~~I~~la~spdg~~Lasgs~D-----g~I~iwDl~sg~~i~ 622 (711)
+..|+.++.+ ..|.+||+.+++.. .+..+ ...+..++|+|||++|+.++.+ +.|++||+.+++...
T Consensus 200 g~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~ 278 (396)
T 3c5m_A 200 DSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEE 278 (396)
T ss_dssp EEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEE
T ss_pred CCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEE
Confidence 8877776653 36889998766543 33333 2358889999999988777543 449999999887644
Q ss_pred EeeCCCCCEEEEEEeC-CCCEEEEEe----------------CCCcEEEEeCCCC
Q psy14440 623 LLTGHTDVVRALCFSR-DGNILASSG----------------QDCSVKLWDFAKL 660 (711)
Q Consensus 623 ~l~~h~~~V~sl~fsp-dg~~Lasgs----------------~Dg~V~iWdl~~~ 660 (711)
..... + .. ++|++ ||++|++++ .++.|++||+...
T Consensus 279 l~~~~-~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~ 330 (396)
T 3c5m_A 279 VMVMP-P-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAK 330 (396)
T ss_dssp EEECC-S-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTT
T ss_pred eeeCC-C-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccC
Confidence 33222 2 33 89999 999888765 3478999998754
No 186
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.68 E-value=3.5e-13 Score=139.17 Aligned_cols=272 Identities=10% Similarity=0.009 Sum_probs=191.3
Q ss_pred EEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeec------------cCccccccccccCCcEEEEEecC
Q psy14440 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMK------------SSDQLQDIEMECDDILVRIMDER 448 (711)
Q Consensus 381 ~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~------------~~~~~~~l~~~~~d~~i~i~d~~ 448 (711)
+.+..+...+.+++++++|++.++...++.|.+|+.. ..+.... ...+...++....++.+..|+..
T Consensus 8 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 86 (299)
T 2z2n_A 8 LNLTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK 86 (299)
T ss_dssp EECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred EcCCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC
Confidence 4455566789999999999988877778899999987 4443322 11222222333346778888865
Q ss_pred CCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEE-EecCCCCEEEEEEcCCCCEEEEEECCCeEE
Q psy14440 449 NAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV-YKGHGHPVWDIKFSPHGYYFASAGHDRMAR 527 (711)
Q Consensus 449 ~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~-~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~ 527 (711)
.......+..+...+.+++++++|+.+++...++.|.+||. +++.... ...+...+.++++.++|+.+++...++.|.
T Consensus 87 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 165 (299)
T 2z2n_A 87 GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIG 165 (299)
T ss_dssp SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEE
Confidence 22212222234567899999999988887777889999998 5544332 233456789999999998887777788999
Q ss_pred EEECCCCceeEE-eecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEE-eeCCCCCeEEEEEecCCCEEEEEe
Q psy14440 528 LWATDSYHPLRL-FVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRL-LTGHKAPVYALSFSVCGRFLASAG 605 (711)
Q Consensus 528 lwd~~~~~~~~~-~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~-~~~h~~~I~~la~spdg~~Lasgs 605 (711)
.||. +++.... .......+.+++++++++.+++...++.|.+||. +++.... ...+...+.+++++++|+++++..
T Consensus 166 ~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 243 (299)
T 2z2n_A 166 RITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEW 243 (299)
T ss_dssp EECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEET
T ss_pred EEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEecc
Confidence 9999 5554433 2334567889999999987776666889999998 6664332 233556789999999999776666
Q ss_pred CCCcEEEEECCCCeEEEE-eeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 606 GDGNVHMWDLSNGHLLTL-LTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 606 ~Dg~I~iwDl~sg~~i~~-l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
.++.|.+||. +++.... +..+...+.++++ ++|+++++.+ .+.|..++..+
T Consensus 244 ~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~ 295 (299)
T 2z2n_A 244 GANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIK 295 (299)
T ss_dssp TTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC-
T ss_pred CCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCc
Confidence 7889999998 5654322 2345567999999 8888777655 56777777654
No 187
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.67 E-value=3.1e-14 Score=153.50 Aligned_cols=244 Identities=13% Similarity=0.123 Sum_probs=178.5
Q ss_pred EEEECCCCCEEEEEeC----------CCeEEEEeCCCCceee-----------------eccCcccccccccc-C-CcEE
Q psy14440 392 CAEISEDVSILAVGFS----------ESYIKLWSLVPQKLKA-----------------MKSSDQLQDIEMEC-D-DILV 442 (711)
Q Consensus 392 ~l~fs~dg~~LatG~~----------dg~I~vWdl~~~~~~~-----------------~~~~~~~~~l~~~~-~-d~~i 442 (711)
.++||+||++|+++.. ++.|.+||..+.+... +..+++...+.+.. . ++.|
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v 133 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI 133 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence 8999999999998863 6789999997755321 22334455555544 2 6889
Q ss_pred EEEecCCCeeEEE-eecccCCEEEEEEcCCC-CEEEEEeCCCeEEEEECCC-CeEEEEE------ecCCCCEEEEEEcCC
Q psy14440 443 RIMDERNAETTRT-LVGHEGPVRKLSFSPDR-SLLLSCSQDNTIRLWSLLL-WRCLVVY------KGHGHPVWDIKFSPH 513 (711)
Q Consensus 443 ~i~d~~~~~~~~~-l~~h~~~V~~l~fspdg-~~L~s~s~Dg~V~iwdl~t-~~~~~~~------~~h~~~V~~v~~sp~ 513 (711)
.+||..+++.+.. +. +.+ ...+.+.|++ ..+++.+.||.+.+|++.. ++..... ..+..++ .+.++++
T Consensus 134 ~v~d~~~~~~~~~~i~-~~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~ 210 (361)
T 2oiz_A 134 GIVDVAKGDYVEDVTA-AAG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALD 210 (361)
T ss_dssp EEEETTTTEEEEEEGG-GTT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEEC
T ss_pred EEEECCCCcEEEEEec-CCC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEeccc
Confidence 9999999988777 43 322 3446677766 6788889999999999865 5544222 1222222 2334567
Q ss_pred CCEEEEEECCCeEEEEECCCCce--eEEeec------CC----CCeeEEEEcCCCCEEEEEEc-----------CCcEEE
Q psy14440 514 GYYFASAGHDRMARLWATDSYHP--LRLFVG------HY----SDVDCVQFHPNSNYVATGSS-----------DRTIRL 570 (711)
Q Consensus 514 g~~l~sgs~Dg~i~lwd~~~~~~--~~~~~~------h~----~~V~~v~~sp~~~~latgs~-----------Dg~I~i 570 (711)
+..++..+.++.+.+||+..... ...+.. +. .....++|+++++.++++.. .++|.+
T Consensus 211 g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~v 290 (361)
T 2oiz_A 211 KDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWV 290 (361)
T ss_dssp SSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEE
T ss_pred CCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEE
Confidence 77778888899999999875432 122110 00 11223789999888877654 348999
Q ss_pred EECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCC--eEEEEeeCCCCCEEEEEEeCCCC
Q psy14440 571 WDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNG--HLLTLLTGHTDVVRALCFSRDGN 641 (711)
Q Consensus 571 wD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg--~~i~~l~~h~~~V~sl~fspdg~ 641 (711)
||+.+++.+..+..+. +.+++|+|||++|++++. +.|.+||..++ +.+..+..+....+.++++|+|+
T Consensus 291 iD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 291 MDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred EECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 9999999999998777 899999999999999887 99999999999 99999877778889999999986
No 188
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.66 E-value=3.1e-14 Score=147.73 Aligned_cols=213 Identities=11% Similarity=0.041 Sum_probs=169.0
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeeccc-CCEEEEEEcCCCCEEE
Q psy14440 398 DVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHE-GPVRKLSFSPDRSLLL 476 (711)
Q Consensus 398 dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~-~~V~~l~fspdg~~L~ 476 (711)
.+++|++++.++.|.+||.. +++.+..+..+. ..+.++.++++|++|+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~-------------------------------tG~~~w~~~~~~~~~~~~~~~~pdG~ilv 52 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKD-------------------------------TKEIVWEYPLEKGWECNSVAATKAGEILF 52 (276)
T ss_dssp CCEEEEECTTCSEEEEEETT-------------------------------TTEEEEEEECCTTCCCCEEEECTTSCEEE
T ss_pred CCcEEEeeCCCCEEEEEECC-------------------------------CCeEEEEeCCCccCCCcCeEECCCCCEEE
Confidence 45677777777777777763 455555555554 4678999999999888
Q ss_pred EEeCCCeEEEEECCCCeEEEEEecC-CCCEEEEEEcCCCCEEEEEEC-CCeEEEEECCCCceeEEeec------CCCCee
Q psy14440 477 SCSQDNTIRLWSLLLWRCLVVYKGH-GHPVWDIKFSPHGYYFASAGH-DRMARLWATDSYHPLRLFVG------HYSDVD 548 (711)
Q Consensus 477 s~s~Dg~V~iwdl~t~~~~~~~~~h-~~~V~~v~~sp~g~~l~sgs~-Dg~i~lwd~~~~~~~~~~~~------h~~~V~ 548 (711)
+.++.|..||. +++.+..+..+ ...+.++.+.++|+++++.+. ++.+..+|. +++.+..+.. +.....
T Consensus 53 --s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~ 128 (276)
T 3no2_A 53 --SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFR 128 (276)
T ss_dssp --ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCS
T ss_pred --eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCccccccc
Confidence 45778999999 79999999875 357889999999999999887 778887876 5666666542 223455
Q ss_pred EEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCC
Q psy14440 549 CVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHT 628 (711)
Q Consensus 549 ~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~ 628 (711)
.+++.++|+++++.+.++.|..||.. |+.+..+..+ ....++.+.++|+++++++.+++|..||..+|+.+.++..+.
T Consensus 129 ~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~ 206 (276)
T 3no2_A 129 QINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNAND 206 (276)
T ss_dssp CCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGG
T ss_pred CceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCC
Confidence 67788999999999999999999987 9999988765 445677888999999999888899999999999999886432
Q ss_pred ------CCEEEEEEeCCCCEEEEEe
Q psy14440 629 ------DVVRALCFSRDGNILASSG 647 (711)
Q Consensus 629 ------~~V~sl~fspdg~~Lasgs 647 (711)
..+.+++..++|+++++..
T Consensus 207 ~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 207 IEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp SBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred CCCccccccccceEcCCCCEEEEec
Confidence 2378889999999888874
No 189
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.66 E-value=1.7e-15 Score=177.73 Aligned_cols=241 Identities=12% Similarity=-0.000 Sum_probs=169.3
Q ss_pred CCCceEEEEECCCCCEEEE-----EeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeeccc
Q psy14440 386 ARQQVTCAEISEDVSILAV-----GFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHE 460 (711)
Q Consensus 386 h~~~V~~l~fs~dg~~Lat-----G~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~ 460 (711)
|...+.+++|||||++||. |+.+..|++||+.+++.... ..+.+.
T Consensus 119 ~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~-----------------------------~~~~~~- 168 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKV-----------------------------DVIEGG- 168 (695)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSS-----------------------------CCBSCC-
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCC-----------------------------cccCcc-
Confidence 4457899999999999994 44456789998876543200 000111
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCe-------------EEEEECCCCe--EEEEE--ecCCCCEEEEEEcCCCCEEEEEECC
Q psy14440 461 GPVRKLSFSPDRSLLLSCSQDNT-------------IRLWSLLLWR--CLVVY--KGHGHPVWDIKFSPHGYYFASAGHD 523 (711)
Q Consensus 461 ~~V~~l~fspdg~~L~s~s~Dg~-------------V~iwdl~t~~--~~~~~--~~h~~~V~~v~~sp~g~~l~sgs~D 523 (711)
...+++|+|||+.|+.++.|.. |++|++.++. ....+ ..|...+.++.|+|+|++++.++.+
T Consensus 169 -~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~ 247 (695)
T 2bkl_A 169 -KYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILR 247 (695)
T ss_dssp -TTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEE
T ss_pred -cccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeC
Confidence 1257899999999999998776 9999998765 22333 3455688999999999999888766
Q ss_pred C----eEEEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEc----CCcEEEEECCCCcE---EEEeeCC-CCCeEE
Q psy14440 524 R----MARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSS----DRTIRLWDCVTGSH---VRLLTGH-KAPVYA 591 (711)
Q Consensus 524 g----~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~----Dg~I~iwD~~~~~~---v~~~~~h-~~~I~~ 591 (711)
+ .|++|+..++. .+.+..+...+....+ ++|. ++..+. ++.|.+||+.++.. ...+..+ ...+..
T Consensus 248 ~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~ 324 (695)
T 2bkl_A 248 GWSENDVYWKRPGEKD-FRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLS 324 (695)
T ss_dssp TTTEEEEEEECTTCSS-CEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEE
T ss_pred CCCceEEEEEcCCCCc-eEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEE
Confidence 6 67777665554 4445556666667667 4566 544443 57899999988753 3333333 456888
Q ss_pred EEEecCCCEEEEEeCCCcEEEEECC-CCeEEEEeeCC-CCCEEEEEEeCCCCEEEEEe----CCCcEEEEeCCCCC
Q psy14440 592 LSFSVCGRFLASAGGDGNVHMWDLS-NGHLLTLLTGH-TDVVRALCFSRDGNILASSG----QDCSVKLWDFAKLS 661 (711)
Q Consensus 592 la~spdg~~Lasgs~Dg~I~iwDl~-sg~~i~~l~~h-~~~V~sl~fspdg~~Lasgs----~Dg~V~iWdl~~~~ 661 (711)
++|+ ++.+++++..|+..+||.+. +|+.+..+..+ .+.|.+++++++++.|+... ..++|++||+.+..
T Consensus 325 ~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 325 VSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp EEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred EEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 9998 77888899999988887654 46666667665 56788889999998666332 34789999997643
No 190
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.66 E-value=2.7e-14 Score=148.65 Aligned_cols=200 Identities=18% Similarity=0.107 Sum_probs=153.3
Q ss_pred EEEeecccCCEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEEC
Q psy14440 453 TRTLVGHEGPVRKLSFSPDRS-LLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWAT 531 (711)
Q Consensus 453 ~~~l~~h~~~V~~l~fspdg~-~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~ 531 (711)
...+..+.....+++|+++++ .++++..++.|..||..++ ...+..+...+.+++++++|+++++...++.|.+||.
T Consensus 20 ~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~ 97 (296)
T 3e5z_A 20 ARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQRE 97 (296)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECS
T ss_pred EEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcC
Confidence 345555667788999999998 7778888999999999877 6677777888999999999998877777799999999
Q ss_pred CCCceeEEeec----CCCCeeEEEEcCCCCEEEEEEc-----------------CCcEEEEECCCCcEEEEeeCCCCCeE
Q psy14440 532 DSYHPLRLFVG----HYSDVDCVQFHPNSNYVATGSS-----------------DRTIRLWDCVTGSHVRLLTGHKAPVY 590 (711)
Q Consensus 532 ~~~~~~~~~~~----h~~~V~~v~~sp~~~~latgs~-----------------Dg~I~iwD~~~~~~v~~~~~h~~~I~ 590 (711)
.+++....... ....+..++++++|+++++.+. .+.|..+|.. ++ +..+..+.....
T Consensus 98 ~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~ 175 (296)
T 3e5z_A 98 PGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPN 175 (296)
T ss_dssp TTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEE
T ss_pred CCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCc
Confidence 87775444322 1235678999999998887321 2456666654 44 445556677789
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEECC-CCeE---EEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCC
Q psy14440 591 ALSFSVCGRFLASAGGDGNVHMWDLS-NGHL---LTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFA 658 (711)
Q Consensus 591 ~la~spdg~~Lasgs~Dg~I~iwDl~-sg~~---i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~ 658 (711)
.++|+++|+.|++.+.++.|.+||+. +|+. ...+..+.+.+.+++++++|+++++. ++.|.+||..
T Consensus 176 gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 176 GLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD 245 (296)
T ss_dssp EEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT
T ss_pred cEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC
Confidence 99999999999777788999999997 5655 33343345667889999999977766 8899999864
No 191
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.63 E-value=5.1e-14 Score=149.59 Aligned_cols=246 Identities=8% Similarity=-0.029 Sum_probs=180.4
Q ss_pred CCCeEEEEeCCCCceeeeccC----------------ccccccccccCCcEEEEEecCCCeeEEEeecccCCEEEEEEcC
Q psy14440 407 SESYIKLWSLVPQKLKAMKSS----------------DQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSP 470 (711)
Q Consensus 407 ~dg~I~vWdl~~~~~~~~~~~----------------~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~fsp 470 (711)
.++.|.+||..+.++...... .....++....++.+.+||..+++.+.++.. ......+++++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~ 93 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLS 93 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeC
Confidence 478999999987765432110 0112233344578899999999998888753 46689999998
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEEecCC-----CCEEEEEEcCCCCEEEEEE--CCCeEEEEECCCCceeEEeecC
Q psy14440 471 DRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHG-----HPVWDIKFSPHGYYFASAG--HDRMARLWATDSYHPLRLFVGH 543 (711)
Q Consensus 471 dg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~-----~~V~~v~~sp~g~~l~sgs--~Dg~i~lwd~~~~~~~~~~~~h 543 (711)
+++.+++...++.|.+||..+++....+.... .....+++ . +..+++++ .+++|.+||..+++.+..+...
T Consensus 94 ~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g 171 (328)
T 3dsm_A 94 DEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDELTIG 171 (328)
T ss_dssp TTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEEECS
T ss_pred CCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC
Confidence 98544444488999999999999887776433 14456777 3 44444444 4899999999999887776543
Q ss_pred CCCeeEEEEcCCCCEEEEEEcC----------CcEEEEECCCCcEEEEeeCC-CCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy14440 544 YSDVDCVQFHPNSNYVATGSSD----------RTIRLWDCVTGSHVRLLTGH-KAPVYALSFSVCGRFLASAGGDGNVHM 612 (711)
Q Consensus 544 ~~~V~~v~~sp~~~~latgs~D----------g~I~iwD~~~~~~v~~~~~h-~~~I~~la~spdg~~Lasgs~Dg~I~i 612 (711)
.....++++++|++++++..+ +.|.+||..+++....+... ......++|++++++|+++.. .|.+
T Consensus 172 -~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~ 248 (328)
T 3dsm_A 172 -IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWR 248 (328)
T ss_dssp -SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEE
T ss_pred -CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEE
Confidence 346789999999877776654 78999999999887776532 246899999999999988765 8999
Q ss_pred EECCCCeEEEE--eeCCCCCEEEEEEeC-CCCEEEEE----eCCCcEEEEeCC
Q psy14440 613 WDLSNGHLLTL--LTGHTDVVRALCFSR-DGNILASS----GQDCSVKLWDFA 658 (711)
Q Consensus 613 wDl~sg~~i~~--l~~h~~~V~sl~fsp-dg~~Lasg----s~Dg~V~iWdl~ 658 (711)
||..+++.... +..+.....+++++| +++++++. ..+++|.+||..
T Consensus 249 ~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 249 MPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp EETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred EECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 99998876421 122245789999998 56666666 578999999976
No 192
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.62 E-value=9.7e-14 Score=163.10 Aligned_cols=199 Identities=12% Similarity=0.037 Sum_probs=148.4
Q ss_pred ccCCEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCe--------
Q psy14440 459 HEGPVRKLSFSPDRSLLLSCSQDN-----TIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRM-------- 525 (711)
Q Consensus 459 h~~~V~~l~fspdg~~L~s~s~Dg-----~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~-------- 525 (711)
|...+.+++|||||++|+.++.++ +|++||+.+++.+.....+ ..+.+++|+|||+.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~ 201 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTE 201 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccc
Confidence 445688999999999998776543 8999999999877643322 23667999999999999988766
Q ss_pred --------EEEEECCCCce--eEEeec--CCCCeeEEEEcCCCCEEEEEEc-----CCcEEEEECCC------Cc-EEEE
Q psy14440 526 --------ARLWATDSYHP--LRLFVG--HYSDVDCVQFHPNSNYVATGSS-----DRTIRLWDCVT------GS-HVRL 581 (711)
Q Consensus 526 --------i~lwd~~~~~~--~~~~~~--h~~~V~~v~~sp~~~~latgs~-----Dg~I~iwD~~~------~~-~v~~ 581 (711)
|++|++.++.. ...+.. |...+..+.|+|+|++|+.++. +..|++||+.+ +. ..+.
T Consensus 202 ~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 281 (710)
T 2xdw_A 202 TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVK 281 (710)
T ss_dssp CCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEE
T ss_pred cccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEE
Confidence 99999988763 233333 4455789999999999998875 56899999986 53 4566
Q ss_pred eeCCCCCeEEEEEecCCCEEEEEeCC----CcEEEEECCCCe--EEEEeeCCCC--CEEEEEEeCCCCEEEEEeCCCc--
Q psy14440 582 LTGHKAPVYALSFSVCGRFLASAGGD----GNVHMWDLSNGH--LLTLLTGHTD--VVRALCFSRDGNILASSGQDCS-- 651 (711)
Q Consensus 582 ~~~h~~~I~~la~spdg~~Lasgs~D----g~I~iwDl~sg~--~i~~l~~h~~--~V~sl~fspdg~~Lasgs~Dg~-- 651 (711)
+..+...+.. .|+++|+.|+..+.+ +.|.+||+.++. ....+..|.. .+.+++|++++.+++++..|+.
T Consensus 282 l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~ 360 (710)
T 2xdw_A 282 LIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNT 360 (710)
T ss_dssp EECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEE
T ss_pred eeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEE
Confidence 6667666655 488999988776653 369999998874 2344444543 6888999987888888888885
Q ss_pred EEEEeCCC
Q psy14440 652 VKLWDFAK 659 (711)
Q Consensus 652 V~iWdl~~ 659 (711)
|++||+..
T Consensus 361 l~~~~~~~ 368 (710)
T 2xdw_A 361 LQLHDLAT 368 (710)
T ss_dssp EEEEETTT
T ss_pred EEEEECCC
Confidence 55566533
No 193
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.62 E-value=2.2e-13 Score=142.27 Aligned_cols=247 Identities=10% Similarity=0.093 Sum_probs=175.0
Q ss_pred EEecCCCceEEEEECCCCCEEEE-------EeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEE
Q psy14440 382 TLLNARQQVTCAEISEDVSILAV-------GFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTR 454 (711)
Q Consensus 382 tl~~h~~~V~~l~fs~dg~~Lat-------G~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 454 (711)
.+...-....+++|+++|+++++ +..++.|.+|+..++++..+.. .
T Consensus 12 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~---------------------------~ 64 (314)
T 1pjx_A 12 KVTEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICK---------------------------P 64 (314)
T ss_dssp EEECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEEC---------------------------C
T ss_pred hhhccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEe---------------------------c
Confidence 34555567889999999998888 5677889999875544321100 0
Q ss_pred EeecccCCEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCeEEEE-Eec----CCCCEEEEEEcCCCCEEEEEECC-----
Q psy14440 455 TLVGHEGPVRKLSFSPD-RSLLLSCSQDNTIRLWSLLLWRCLVV-YKG----HGHPVWDIKFSPHGYYFASAGHD----- 523 (711)
Q Consensus 455 ~l~~h~~~V~~l~fspd-g~~L~s~s~Dg~V~iwdl~t~~~~~~-~~~----h~~~V~~v~~sp~g~~l~sgs~D----- 523 (711)
...++...+.+++++++ +++++ ++..+.|.+||.. ++.... ... ....+.+++++++|+++++...+
T Consensus 65 ~~~~~~~~~~~i~~~~~~g~l~v-~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~ 142 (314)
T 1pjx_A 65 EVNGYGGIPAGCQCDRDANQLFV-ADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPA 142 (314)
T ss_dssp EETTEECCEEEEEECSSSSEEEE-EETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTS
T ss_pred ccCCCCCCCceEEEecCCCcEEE-EECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccc
Confidence 01124467899999999 65444 4444579999998 665433 221 12458899999999887777655
Q ss_pred ----------CeEEEEECCCCceeEEeecCCCCeeEEEEc----CCCCEEEEE-EcCCcEEEEECC-CCc-----EEEEe
Q psy14440 524 ----------RMARLWATDSYHPLRLFVGHYSDVDCVQFH----PNSNYVATG-SSDRTIRLWDCV-TGS-----HVRLL 582 (711)
Q Consensus 524 ----------g~i~lwd~~~~~~~~~~~~h~~~V~~v~~s----p~~~~latg-s~Dg~I~iwD~~-~~~-----~v~~~ 582 (711)
+.|..|+.+ ++... +..+......++|+ ++++.|+++ +.++.|.+||.. +++ ....+
T Consensus 143 ~~~~~~~~~~~~l~~~~~~-g~~~~-~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~ 220 (314)
T 1pjx_A 143 DYTRSMQEKFGSIYCFTTD-GQMIQ-VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHI 220 (314)
T ss_dssp CCCBTTSSSCEEEEEECTT-SCEEE-EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEEC
T ss_pred cccccccCCCCeEEEECCC-CCEEE-eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEEC
Confidence 567777765 44333 33344557889999 999766555 457899999986 454 22333
Q ss_pred eCCC-CCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEE-EEEeCCCcEEEEeCCC
Q psy14440 583 TGHK-APVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNIL-ASSGQDCSVKLWDFAK 659 (711)
Q Consensus 583 ~~h~-~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~L-asgs~Dg~V~iWdl~~ 659 (711)
.++. ..+..++++++|+++++...++.|.+||..+++.+..+..+...+.+++|+++|+.| ++...++.|..|++..
T Consensus 221 ~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 221 PGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp CCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 3444 568899999999988888788999999998788777777777789999999999955 4555678999999864
No 194
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.60 E-value=6.5e-12 Score=129.54 Aligned_cols=243 Identities=9% Similarity=0.009 Sum_probs=172.2
Q ss_pred CeEEEEeCCCC--ceeeeccCccccccccccCCcEEEEEecCCCeeEEE-eecccCCEEEEEEcCCCCEEEEEeCCCeEE
Q psy14440 409 SYIKLWSLVPQ--KLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRT-LVGHEGPVRKLSFSPDRSLLLSCSQDNTIR 485 (711)
Q Consensus 409 g~I~vWdl~~~--~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~ 485 (711)
|.+..|.+... ....+....+...+.....++.+.+||.. +..... +..+...+.+++++++|..+++...++.|.
T Consensus 3 g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 81 (299)
T 2z2n_A 3 FKLQELNLTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIG 81 (299)
T ss_dssp EEEEEEECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred ceEEEEcCCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEE
Confidence 34444544322 23334444444434334446788889877 443322 223557799999999998888777788999
Q ss_pred EEECCCCeEEEEEe--cCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEE-eecCCCCeeEEEEcCCCCEEEEE
Q psy14440 486 LWSLLLWRCLVVYK--GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRL-FVGHYSDVDCVQFHPNSNYVATG 562 (711)
Q Consensus 486 iwdl~t~~~~~~~~--~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~-~~~h~~~V~~v~~sp~~~~latg 562 (711)
.||.. ++. ..+. .....+.++++.++|+++++...++.|.+||. +++.... ...+...+.+++++++++.+++.
T Consensus 82 ~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 158 (299)
T 2z2n_A 82 RITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTE 158 (299)
T ss_dssp EECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEE
T ss_pred EECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEe
Confidence 99986 332 2232 34567899999999988888777899999998 4443332 22345678999999999887777
Q ss_pred EcCCcEEEEECCCCcEEEE-eeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEE-eeCCCCCEEEEEEeCCC
Q psy14440 563 SSDRTIRLWDCVTGSHVRL-LTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTL-LTGHTDVVRALCFSRDG 640 (711)
Q Consensus 563 s~Dg~I~iwD~~~~~~v~~-~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~-l~~h~~~V~sl~fspdg 640 (711)
..++.|..||. +++.... ...+...+.+++++++|+++++...++.|.+||. +++.... ...+...+.+++++++|
T Consensus 159 ~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g 236 (299)
T 2z2n_A 159 NQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGI 236 (299)
T ss_dssp TTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTT
T ss_pred CCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCC
Confidence 77789999998 6765443 2334567889999999997777767889999999 7765432 23345679999999999
Q ss_pred CEEEEEeCCCcEEEEeC
Q psy14440 641 NILASSGQDCSVKLWDF 657 (711)
Q Consensus 641 ~~Lasgs~Dg~V~iWdl 657 (711)
+++++...++.|.+||.
T Consensus 237 ~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 237 DLWFTEWGANKIGRLTS 253 (299)
T ss_dssp CEEEEETTTTEEEEEET
T ss_pred CEEEeccCCceEEEECC
Confidence 97777667889999997
No 195
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.58 E-value=4e-14 Score=165.97 Aligned_cols=196 Identities=9% Similarity=-0.010 Sum_probs=143.1
Q ss_pred cccCCEEEEEEcCCCCEEE-----EEeCCCeEEEEECCCCeEEEEEecCCCCE--EEEEEcCCCCEEEEEECCCe-----
Q psy14440 458 GHEGPVRKLSFSPDRSLLL-----SCSQDNTIRLWSLLLWRCLVVYKGHGHPV--WDIKFSPHGYYFASAGHDRM----- 525 (711)
Q Consensus 458 ~h~~~V~~l~fspdg~~L~-----s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V--~~v~~sp~g~~l~sgs~Dg~----- 525 (711)
+|...+.+++|||||++|+ +|+.+.+|++||+.+++.+. ..+...+ .+++|+|+|+.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKV 195 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCcc
Confidence 4556789999999999998 44456789999999987641 1122222 67999999999999998876
Q ss_pred --------EEEEECCCCce--eEEee--cCCCCeeEEEEcCCCCEEEEEEcCC----cEEEEECCCCcEEEEeeCCCCCe
Q psy14440 526 --------ARLWATDSYHP--LRLFV--GHYSDVDCVQFHPNSNYVATGSSDR----TIRLWDCVTGSHVRLLTGHKAPV 589 (711)
Q Consensus 526 --------i~lwd~~~~~~--~~~~~--~h~~~V~~v~~sp~~~~latgs~Dg----~I~iwD~~~~~~v~~~~~h~~~I 589 (711)
|++|++.++.. ...+. .+...+.++.|+|+|++|+.++.++ .|++||..++. .+.+..+...+
T Consensus 196 ~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~ 274 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAK 274 (695)
T ss_dssp GGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSCC
T ss_pred ccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCce
Confidence 99999988762 23333 3556788999999999999888766 67778766665 44455555666
Q ss_pred EEEEEecCCCEEEEEe---CCCcEEEEECCCCeE---EEEeeCC-CCCEEEEEEeCCCCEEEEEeCCCcEEEEeCC
Q psy14440 590 YALSFSVCGRFLASAG---GDGNVHMWDLSNGHL---LTLLTGH-TDVVRALCFSRDGNILASSGQDCSVKLWDFA 658 (711)
Q Consensus 590 ~~la~spdg~~Lasgs---~Dg~I~iwDl~sg~~---i~~l~~h-~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~ 658 (711)
....+ ++|++++++. .++.|.+||+.++.. ...+..+ ...+.+++|+ ++.+++++..|+..+||.+.
T Consensus 275 ~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 275 YEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp EEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred EEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 66666 5666444444 257899999987753 3333333 4568889998 77888999999998888765
No 196
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.58 E-value=1.1e-13 Score=163.42 Aligned_cols=239 Identities=13% Similarity=0.034 Sum_probs=166.2
Q ss_pred CceEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCC
Q psy14440 388 QQVTCAEISEDVSILAVGFSE-----SYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGP 462 (711)
Q Consensus 388 ~~V~~l~fs~dg~~LatG~~d-----g~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~ 462 (711)
..+.+++|||||++||.+..+ ..|++||+.+++.. .. ..+...
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~-------------------------------~~-~~~~~~ 210 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPL-------------------------------AD-ELKWVK 210 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEE-------------------------------EE-EEEEEE
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCC-------------------------------Cc-cCCCce
Confidence 367889999999999987654 35777777654321 11 111112
Q ss_pred EEEEEEcCCCCEEEEEeCCCe--------------EEEEECCCCe--EEEEEec--CCCCEEEEEEcCCCCEEEEEECCC
Q psy14440 463 VRKLSFSPDRSLLLSCSQDNT--------------IRLWSLLLWR--CLVVYKG--HGHPVWDIKFSPHGYYFASAGHDR 524 (711)
Q Consensus 463 V~~l~fspdg~~L~s~s~Dg~--------------V~iwdl~t~~--~~~~~~~--h~~~V~~v~~sp~g~~l~sgs~Dg 524 (711)
+.+++|+|| +.|+.++.|+. |++|++.++. ....+.. +...+.++.|+|+|++++.++.++
T Consensus 211 ~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~ 289 (741)
T 1yr2_A 211 FSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEG 289 (741)
T ss_dssp SCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECT
T ss_pred eccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEcc
Confidence 357899999 98888877654 8999997665 2333443 334588999999999988887554
Q ss_pred -----eEEEEECCCC--ceeEEeecCCCCeeEEEEcCCCCEEEEEEcC----CcEEEEECCCC--cEEEEeeCCCCCeEE
Q psy14440 525 -----MARLWATDSY--HPLRLFVGHYSDVDCVQFHPNSNYVATGSSD----RTIRLWDCVTG--SHVRLLTGHKAPVYA 591 (711)
Q Consensus 525 -----~i~lwd~~~~--~~~~~~~~h~~~V~~v~~sp~~~~latgs~D----g~I~iwD~~~~--~~v~~~~~h~~~I~~ 591 (711)
.|++||++++ ...+.+..+...+.... +++|+.|+..+.+ +.|.+||+.++ +....+..+...+..
T Consensus 290 ~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~ 368 (741)
T 1yr2_A 290 TDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLES 368 (741)
T ss_dssp TCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEE
T ss_pred CCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEE
Confidence 8999999876 42455555555555554 4889988888764 45999999875 334444455556777
Q ss_pred EEEecCCCEEEEEeCCCcEEEEECC-CCeEEEEeeCC-CCCEEEEEEeCCCCEEEE-Ee---CCCcEEEEeCCCCC
Q psy14440 592 LSFSVCGRFLASAGGDGNVHMWDLS-NGHLLTLLTGH-TDVVRALCFSRDGNILAS-SG---QDCSVKLWDFAKLS 661 (711)
Q Consensus 592 la~spdg~~Lasgs~Dg~I~iwDl~-sg~~i~~l~~h-~~~V~sl~fspdg~~Las-gs---~Dg~V~iWdl~~~~ 661 (711)
++|+ ++.++++...||..+||.+. +|+.+..+..+ .+.|..++++++++.|+. .+ ..++|++||+.+..
T Consensus 369 ~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 369 VGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred EEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 8887 66778888888877776543 46666667653 577899999999875553 22 34789999987643
No 197
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.58 E-value=8.8e-12 Score=128.57 Aligned_cols=268 Identities=9% Similarity=-0.004 Sum_probs=187.5
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeecc------------CccccccccccCCcEEEEEecCC
Q psy14440 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKS------------SDQLQDIEMECDDILVRIMDERN 449 (711)
Q Consensus 382 tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~------------~~~~~~l~~~~~d~~i~i~d~~~ 449 (711)
.+......+.+++++++|++.++...++.|.+|+.. .++..... ..+.........++.|..+|..
T Consensus 14 ~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~- 91 (300)
T 2qc5_A 14 NLSIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK- 91 (300)
T ss_dssp ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred ecCCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-
Confidence 334456789999999999988888788999999987 44433211 1222222233345778888876
Q ss_pred CeeEE-EeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEE-EecCCCCEEEEEEcCCCCEEEEEECCCeEE
Q psy14440 450 AETTR-TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV-YKGHGHPVWDIKFSPHGYYFASAGHDRMAR 527 (711)
Q Consensus 450 ~~~~~-~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~-~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~ 527 (711)
++... .+......+.+++++++|+++++...++.|..||.. ++.... +......+.++++.++|+.+++...++.|.
T Consensus 92 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~ 170 (300)
T 2qc5_A 92 GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIG 170 (300)
T ss_dssp SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEE
Confidence 44332 222244678999999999887777778899999987 554432 233456789999999999777766688999
Q ss_pred EEECCCCceeEE-eecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEE-eeCCCCCeEEEEEecCCCEEEEEe
Q psy14440 528 LWATDSYHPLRL-FVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRL-LTGHKAPVYALSFSVCGRFLASAG 605 (711)
Q Consensus 528 lwd~~~~~~~~~-~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~-~~~h~~~I~~la~spdg~~Lasgs 605 (711)
.|+. +++.... ...+...+.+++++++++.+++....+.|.+||. +++.... +..+...+.+++++++|+++++..
T Consensus 171 ~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 248 (300)
T 2qc5_A 171 RITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEW 248 (300)
T ss_dssp EECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEET
T ss_pred EECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEecc
Confidence 9998 4544332 2234567899999999987777666778999998 5554433 233456789999999999777666
Q ss_pred CCCcEEEEECCCCeEEEE-eeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeC
Q psy14440 606 GDGNVHMWDLSNGHLLTL-LTGHTDVVRALCFSRDGNILASSGQDCSVKLWDF 657 (711)
Q Consensus 606 ~Dg~I~iwDl~sg~~i~~-l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl 657 (711)
.++.|..||. +++.... +......+.+++++++|+++++.. . .|..+|.
T Consensus 249 ~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 249 GANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp TTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred CCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 6789999998 5554322 333446688999999998766554 4 6766664
No 198
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.57 E-value=3.5e-13 Score=139.70 Aligned_cols=232 Identities=12% Similarity=0.058 Sum_probs=175.4
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEEecCC-CCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEeecC-CCCee
Q psy14440 471 DRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHG-HPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGH-YSDVD 548 (711)
Q Consensus 471 dg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~-~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~h-~~~V~ 548 (711)
.++.|++++.|+.|.+||..+++.+..+..+. ..+.++.++|+|++++ +.++.|..||. +++.+..+..+ ...+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 46789999999999999999999999998776 5788999999999888 45788999999 78888888765 35788
Q ss_pred EEEEcCCCCEEEEEEc-CCcEEEEECCCCcEEEEeeC------CCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEE
Q psy14440 549 CVQFHPNSNYVATGSS-DRTIRLWDCVTGSHVRLLTG------HKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLL 621 (711)
Q Consensus 549 ~v~~sp~~~~latgs~-Dg~I~iwD~~~~~~v~~~~~------h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i 621 (711)
++.+.++|+++++.+. ++.|..+|. +|+.+..+.. +......+++.++|++|++...++.|..||.. |+.+
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~ 158 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLL 158 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred ccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEE
Confidence 9999999999999887 778888885 7887777652 22345566788999999999999999999987 9999
Q ss_pred EEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCCccCcccc--c---cccccc-cccccccceeeecccCC--
Q psy14440 622 TLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEV--N---LSHSAD-IKNSSLAYLVRSYKTKA-- 693 (711)
Q Consensus 622 ~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~--~---~~~~~~-~~~~~~~~~l~~~~t~~-- 693 (711)
..+..+ ..+.++.+.++|+++++++.+++|..||..+.......... . ...... ........++..|.+|.
T Consensus 159 w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~ 237 (276)
T 3no2_A 159 NSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDRE 237 (276)
T ss_dssp EEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTT
T ss_pred EEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCcccc
Confidence 988765 34567788899999999988889999998765442221100 0 000000 01123344556666653
Q ss_pred ----cceEEEEEccCCeee
Q psy14440 694 ----SPLLHLIFSRRNILL 708 (711)
Q Consensus 694 ----~pV~~v~Fs~~n~ll 708 (711)
.....+.+++++.++
T Consensus 238 ~~~~~~~~~~~~~~~g~~~ 256 (276)
T 3no2_A 238 AGKGKHPQLVEIDSEGKVV 256 (276)
T ss_dssp GGGSCCCSEEEECTTSBEE
T ss_pred ccccCCceEEEECCCCCEE
Confidence 355677788888765
No 199
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.55 E-value=9e-12 Score=142.00 Aligned_cols=275 Identities=15% Similarity=0.062 Sum_probs=194.5
Q ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEEeCC--CCcee----------eeccC----cccccccccc-CCcEEEEEecC
Q psy14440 386 ARQQVTCAEISEDVSILAVGFSESYIKLWSLV--PQKLK----------AMKSS----DQLQDIEMEC-DDILVRIMDER 448 (711)
Q Consensus 386 h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~--~~~~~----------~~~~~----~~~~~l~~~~-~d~~i~i~d~~ 448 (711)
....+.++.||+||+++++++.++.|.+||+. +.++. .+..+ .++..+.+.+ ..+.+.++|..
T Consensus 195 ~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~ 274 (567)
T 1qks_A 195 TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGE 274 (567)
T ss_dssp CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETT
T ss_pred CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECC
Confidence 34467799999999999999999999999995 43322 12333 2444444333 45788999999
Q ss_pred CCeeEEEeec----------ccC-CEEEEEEcCCCCE-EEEEeCCCeEEEEECCCCeEEEEE-ecCCCCEEEEEEcCCCC
Q psy14440 449 NAETTRTLVG----------HEG-PVRKLSFSPDRSL-LLSCSQDNTIRLWSLLLWRCLVVY-KGHGHPVWDIKFSPHGY 515 (711)
Q Consensus 449 ~~~~~~~l~~----------h~~-~V~~l~fspdg~~-L~s~s~Dg~V~iwdl~t~~~~~~~-~~h~~~V~~v~~sp~g~ 515 (711)
+.+.+..+.. |.. .+.++.+++++.. +++...+|.|.++|..+.+.+... ........++.|+++|+
T Consensus 275 t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr 354 (567)
T 1qks_A 275 TLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHR 354 (567)
T ss_dssp TCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSC
T ss_pred CCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCC
Confidence 9888876642 212 6888999988664 445556799999999765433222 22455678899999999
Q ss_pred EEEEEE-CCCeEEEEECCCCceeEEeec-----CCCCeeEEEEcCCCCEEE-EEE-cCCcEEEEECCC-------CcEEE
Q psy14440 516 YFASAG-HDRMARLWATDSYHPLRLFVG-----HYSDVDCVQFHPNSNYVA-TGS-SDRTIRLWDCVT-------GSHVR 580 (711)
Q Consensus 516 ~l~sgs-~Dg~i~lwd~~~~~~~~~~~~-----h~~~V~~v~~sp~~~~la-tgs-~Dg~I~iwD~~~-------~~~v~ 580 (711)
+|+++. .+++|.++|+.+++.+..+.- |.+.-..+ ++|++..++ ++. .+++|.++|..+ .+.++
T Consensus 355 ~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~ 433 (567)
T 1qks_A 355 YFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILD 433 (567)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEE
T ss_pred EEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEE
Confidence 887766 678999999999987766543 32211122 588755554 443 468999999988 67788
Q ss_pred EeeCCCCCeEEEEEecCCCEEEEEeC-------CCcEEEEECCCC-----e-EEEEee--------CCCCCEEEEEEeCC
Q psy14440 581 LLTGHKAPVYALSFSVCGRFLASAGG-------DGNVHMWDLSNG-----H-LLTLLT--------GHTDVVRALCFSRD 639 (711)
Q Consensus 581 ~~~~h~~~I~~la~spdg~~Lasgs~-------Dg~I~iwDl~sg-----~-~i~~l~--------~h~~~V~sl~fspd 639 (711)
.+......-..+..+|++++|++... .++|.|+|+.+. . .+..+. .-...+..+.|+++
T Consensus 434 ~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (567)
T 1qks_A 434 SFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKD 513 (567)
T ss_dssp EEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTT
T ss_pred EEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCC
Confidence 88765444455788999999998763 359999999876 2 123332 12357899999999
Q ss_pred CCEEEEEe-----CCCcEEEEeCCCCC
Q psy14440 640 GNILASSG-----QDCSVKLWDFAKLS 661 (711)
Q Consensus 640 g~~Lasgs-----~Dg~V~iWdl~~~~ 661 (711)
|+.+..+. .++.|.|+|..++.
T Consensus 514 G~~~~~s~~~~~~~~~~i~v~D~~t~~ 540 (567)
T 1qks_A 514 GTEVWFSVWNGKDQESALVVVDDKTLE 540 (567)
T ss_dssp SSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred CCEEEEEeecCCCCCCcEEEEECCCce
Confidence 99776653 37899999988754
No 200
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.55 E-value=6.3e-13 Score=135.65 Aligned_cols=197 Identities=6% Similarity=-0.031 Sum_probs=144.8
Q ss_pred CEEEEEEcCCCCEEE-EEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEe
Q psy14440 462 PVRKLSFSPDRSLLL-SCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLF 540 (711)
Q Consensus 462 ~V~~l~fspdg~~L~-s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~ 540 (711)
...+++++++|+.++ +.+.++.|.+||..+.........+...+.+++++++|+.+++.. ++.|.+||.+........
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~ 103 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLP 103 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeee
Confidence 678999999998666 446788999999865543322223345678899999998666655 889999998865443322
Q ss_pred ecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeE
Q psy14440 541 VGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHL 620 (711)
Q Consensus 541 ~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~ 620 (711)
......+.+++++++|+.+++...++.|.+||..+.............+.+++++++|+++++...++.|.+||...+..
T Consensus 104 ~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~ 183 (270)
T 1rwi_B 104 FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ 183 (270)
T ss_dssp CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCE
T ss_pred cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCce
Confidence 23346789999999999777777788999998765544333333334678999999999777777788999999887765
Q ss_pred EEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 621 LTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 621 i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
......+...+.+++++++|+++++...++.|.+||...
T Consensus 184 ~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~ 222 (270)
T 1rwi_B 184 VVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGS 222 (270)
T ss_dssp EECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTC
T ss_pred EeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCC
Confidence 544334446789999999998888877889999999754
No 201
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.55 E-value=3.2e-12 Score=135.62 Aligned_cols=219 Identities=10% Similarity=-0.001 Sum_probs=165.1
Q ss_pred ccCCcEEEEEecCCCeeEEEee------cccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEE
Q psy14440 436 ECDDILVRIMDERNAETTRTLV------GHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIK 509 (711)
Q Consensus 436 ~~~d~~i~i~d~~~~~~~~~l~------~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~ 509 (711)
+..++.|.++|..+++....+. .......++.+. +++.+++...+++|.+||..+++.+..+. .......++
T Consensus 13 g~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~ 90 (328)
T 3dsm_A 13 QYSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIH 90 (328)
T ss_dssp TSCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEE
T ss_pred CCCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEE
Confidence 3457899999999888765442 122346778874 44455555667999999999999988886 456788999
Q ss_pred EcCCCCEEEEEECCCeEEEEECCCCceeEEeecCC-----CCeeEEEEcCCCCEEEEEE--cCCcEEEEECCCCcEEEEe
Q psy14440 510 FSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHY-----SDVDCVQFHPNSNYVATGS--SDRTIRLWDCVTGSHVRLL 582 (711)
Q Consensus 510 ~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~-----~~V~~v~~sp~~~~latgs--~Dg~I~iwD~~~~~~v~~~ 582 (711)
++++++.+++...++.|.+||..+++....+.... .....+++ ++..+++++ .+++|.+||..+++.+..+
T Consensus 91 ~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i 168 (328)
T 3dsm_A 91 FLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDEL 168 (328)
T ss_dssp EEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEE
T ss_pred EeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEE
Confidence 98888555555489999999999988776665332 14567777 345555555 4889999999999988877
Q ss_pred eCCCCCeEEEEEecCCCEEEEEeCC----------CcEEEEECCCCeEEEEeeCC-CCCEEEEEEeCCCCEEEEEeCCCc
Q psy14440 583 TGHKAPVYALSFSVCGRFLASAGGD----------GNVHMWDLSNGHLLTLLTGH-TDVVRALCFSRDGNILASSGQDCS 651 (711)
Q Consensus 583 ~~h~~~I~~la~spdg~~Lasgs~D----------g~I~iwDl~sg~~i~~l~~h-~~~V~sl~fspdg~~Lasgs~Dg~ 651 (711)
... .....++++++|++++++..+ +.|.+||..+++....+... ......++|+++++.|+++.. .
T Consensus 169 ~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~ 245 (328)
T 3dsm_A 169 TIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--D 245 (328)
T ss_dssp ECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--S
T ss_pred EcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--E
Confidence 643 345788999999977776654 78999999999988777643 246899999999999888764 8
Q ss_pred EEEEeCCCCC
Q psy14440 652 VKLWDFAKLS 661 (711)
Q Consensus 652 V~iWdl~~~~ 661 (711)
|.+||..+..
T Consensus 246 v~~~d~~t~~ 255 (328)
T 3dsm_A 246 IWRMPVEADR 255 (328)
T ss_dssp EEEEETTCSS
T ss_pred EEEEECCCCc
Confidence 9999987543
No 202
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.54 E-value=1.5e-11 Score=140.25 Aligned_cols=262 Identities=11% Similarity=-0.008 Sum_probs=192.7
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCcee----------eeccCccccccccccCCcEEEEEecC--CCeeEEEeecccCCEE
Q psy14440 397 EDVSILAVGFSESYIKLWSLVPQKLK----------AMKSSDQLQDIEMECDDILVRIMDER--NAETTRTLVGHEGPVR 464 (711)
Q Consensus 397 ~dg~~LatG~~dg~I~vWdl~~~~~~----------~~~~~~~~~~l~~~~~d~~i~i~d~~--~~~~~~~l~~h~~~V~ 464 (711)
+++.++++...+++|.+||..+.++. .+..+.+...+.+++.++.|.+||.. +.+.+..+....+ ..
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~-P~ 243 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE-AR 243 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE-EE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC-Cc
Confidence 44556777788899999999886643 23445666777777788999999985 7777777765444 57
Q ss_pred EEEEc----CCCCEEEEEeC-CCeEEEEECCCCeEEEEEecC-----------CCCEEEEEEcCCCCEE-EEEECCCeEE
Q psy14440 465 KLSFS----PDRSLLLSCSQ-DNTIRLWSLLLWRCLVVYKGH-----------GHPVWDIKFSPHGYYF-ASAGHDRMAR 527 (711)
Q Consensus 465 ~l~fs----pdg~~L~s~s~-Dg~V~iwdl~t~~~~~~~~~h-----------~~~V~~v~~sp~g~~l-~sgs~Dg~i~ 527 (711)
.++|+ |||+++++++. +++|.++|..+.+.+..+... ...+..+..++++..+ +....+|.|.
T Consensus 244 ~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~ 323 (567)
T 1qks_A 244 SIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKIL 323 (567)
T ss_dssp EEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEE
T ss_pred eeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEE
Confidence 99999 69999888765 589999999999988876532 1257788888876544 4455679999
Q ss_pred EEECCCCceeEEee-cCCCCeeEEEEcCCCCEEEEEE-cCCcEEEEECCCCcEEEEeeC-----CCCCeEEEEEecCCCE
Q psy14440 528 LWATDSYHPLRLFV-GHYSDVDCVQFHPNSNYVATGS-SDRTIRLWDCVTGSHVRLLTG-----HKAPVYALSFSVCGRF 600 (711)
Q Consensus 528 lwd~~~~~~~~~~~-~h~~~V~~v~~sp~~~~latgs-~Dg~I~iwD~~~~~~v~~~~~-----h~~~I~~la~spdg~~ 600 (711)
++|....+.+.... .......++.|+++++++++++ .+++|.++|+.+++.+..+.. |.+....+ ++|++..
T Consensus 324 ~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~ 402 (567)
T 1qks_A 324 LVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGP 402 (567)
T ss_dssp EEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEE
T ss_pred EEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCc
Confidence 99998764332211 2344577899999999988776 578999999999988776653 33222222 5787554
Q ss_pred EE-EEe-CCCcEEEEECCC-------CeEEEEeeCCCCCEEEEEEeCCCCEEEEEeC-------CCcEEEEeCCCC
Q psy14440 601 LA-SAG-GDGNVHMWDLSN-------GHLLTLLTGHTDVVRALCFSRDGNILASSGQ-------DCSVKLWDFAKL 660 (711)
Q Consensus 601 La-sgs-~Dg~I~iwDl~s-------g~~i~~l~~h~~~V~sl~fspdg~~Lasgs~-------Dg~V~iWdl~~~ 660 (711)
++ ++. .++.|.++|..+ .+.+.++......-..+..+|++++|.+... .++|.|+|+.++
T Consensus 403 v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 403 VWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp EEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred EEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 44 443 468999999987 6788888865444345778999999988663 359999999875
No 203
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.54 E-value=4.7e-12 Score=138.80 Aligned_cols=234 Identities=10% Similarity=0.134 Sum_probs=167.6
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEEEE
Q psy14440 388 QQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLS 467 (711)
Q Consensus 388 ~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~ 467 (711)
....+++|+++++++++...++.|++|+..++.+.. ....... .. ++
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~-------------------------------~~~~~~~-~~-ia 177 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTT-------------------------------VHPGFKG-GK-PA 177 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEE-------------------------------EEETCCB-CB-CE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEE-------------------------------eeccCCC-Cc-ee
Confidence 467899999999988888878899999886543321 1111122 23 89
Q ss_pred EcCCCCEEEEEeCCC--eEEEEECCCCeEEEEE----ecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEE--
Q psy14440 468 FSPDRSLLLSCSQDN--TIRLWSLLLWRCLVVY----KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRL-- 539 (711)
Q Consensus 468 fspdg~~L~s~s~Dg--~V~iwdl~t~~~~~~~----~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~-- 539 (711)
|+++++.|+++..++ .|.+|+...+.....+ ......++++++++++..|+++..++.|+.||.+++.....
T Consensus 178 ~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~ 257 (409)
T 3hrp_A 178 VTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQ 257 (409)
T ss_dssp ECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEE
T ss_pred EecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEec
Confidence 999999999988866 7889988765443333 21456678999999555555677789999999987753332
Q ss_pred --eecCCCCe--eEEEEcCC-CCEEEEEEcCCcEEEEECCCCcEEEEeeCCC---------------CCeEEEEEecCCC
Q psy14440 540 --FVGHYSDV--DCVQFHPN-SNYVATGSSDRTIRLWDCVTGSHVRLLTGHK---------------APVYALSFSVCGR 599 (711)
Q Consensus 540 --~~~h~~~V--~~v~~sp~-~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~---------------~~I~~la~spdg~ 599 (711)
..++...- ..++|+|+ +.++++...++.|+.||.... +..+.++. .....++++++|+
T Consensus 258 ~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~ 335 (409)
T 3hrp_A 258 LELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN 335 (409)
T ss_dssp CCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC
T ss_pred ccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC
Confidence 22222222 39999995 555555566889999997543 34444432 3478999999999
Q ss_pred EEEEEe-CCCcEEEEECCCCeEEEEeeCC---------------CCCEEEEEEeCCCCEEEEEeCCCcEEEEeC
Q psy14440 600 FLASAG-GDGNVHMWDLSNGHLLTLLTGH---------------TDVVRALCFSRDGNILASSGQDCSVKLWDF 657 (711)
Q Consensus 600 ~Lasgs-~Dg~I~iwDl~sg~~i~~l~~h---------------~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl 657 (711)
++++-+ .+++|+.||+.+|+. ..+.++ -....+++++++|+++++-..+++|+.+++
T Consensus 336 lyvad~~~~~~I~~~~~~~G~v-~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 336 FYIVDGFKGYCLRKLDILDGYV-STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEEETTTTCEEEEEETTTTEE-EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EEEEeCCCCCEEEEEECCCCEE-EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 777777 789999999888874 344443 245889999999988888888899998875
No 204
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.51 E-value=1.2e-11 Score=129.09 Aligned_cols=227 Identities=14% Similarity=0.169 Sum_probs=159.9
Q ss_pred CCceEEEEECCC-CCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEE
Q psy14440 387 RQQVTCAEISED-VSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRK 465 (711)
Q Consensus 387 ~~~V~~l~fs~d-g~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~ 465 (711)
..-.-+..|+++ +.++++...++.|..|+..+.... .+ .+...+.+
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~--------------------------------~~-~~~~~~~~ 58 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ--------------------------------RV-TMDAPVSS 58 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE--------------------------------EE-ECSSCEEE
T ss_pred CccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE--------------------------------EE-eCCCceEE
Confidence 344568889985 556677777888988887543321 11 12456899
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecC----CCCEEEEEEcCCCCEEEEEECC---------CeEEEEECC
Q psy14440 466 LSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGH----GHPVWDIKFSPHGYYFASAGHD---------RMARLWATD 532 (711)
Q Consensus 466 l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h----~~~V~~v~~sp~g~~l~sgs~D---------g~i~lwd~~ 532 (711)
++++++|++++ +. ++.|.+||..+++........ ...+.+++++++|+++++.... ....+|.++
T Consensus 59 i~~~~dG~l~v-~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d 136 (297)
T 3g4e_A 59 VALRQSGGYVA-TI-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLF 136 (297)
T ss_dssp EEEBTTSSEEE-EE-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEEC
T ss_pred EEECCCCCEEE-EE-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEE
Confidence 99999999544 44 567999999888765444321 2457899999999866654322 334555554
Q ss_pred CCceeEEeecCCCCeeEEEEcCCCCEEEEE-EcCCcEEEEEC--CCCcE-----EEEeeCCCCCeEEEEEecCCCEEEEE
Q psy14440 533 SYHPLRLFVGHYSDVDCVQFHPNSNYVATG-SSDRTIRLWDC--VTGSH-----VRLLTGHKAPVYALSFSVCGRFLASA 604 (711)
Q Consensus 533 ~~~~~~~~~~h~~~V~~v~~sp~~~~latg-s~Dg~I~iwD~--~~~~~-----v~~~~~h~~~I~~la~spdg~~Lasg 604 (711)
....+..+..+....+.++|+|+++.|+.+ +.++.|.+||+ .+|.. +..+..+.+....++++++|++.++.
T Consensus 137 ~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~ 216 (297)
T 3g4e_A 137 PDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVAC 216 (297)
T ss_dssp TTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEE
T ss_pred CCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEE
Confidence 322333334445567899999999877554 55788999997 45543 22223344678899999999888877
Q ss_pred eCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEe-CCCCEEEEEeC
Q psy14440 605 GGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFS-RDGNILASSGQ 648 (711)
Q Consensus 605 s~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fs-pdg~~Lasgs~ 648 (711)
..++.|.+||..+|+.+..+..+...+++++|. ++++.|+.++.
T Consensus 217 ~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 217 YNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp ETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred cCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 778899999999999999998887889999998 78887766554
No 205
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.51 E-value=1.7e-12 Score=153.38 Aligned_cols=196 Identities=15% Similarity=0.125 Sum_probs=141.7
Q ss_pred ccCCEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCe--------
Q psy14440 459 HEGPVRKLSFSPDRSLLLSCSQD-----NTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRM-------- 525 (711)
Q Consensus 459 h~~~V~~l~fspdg~~L~s~s~D-----g~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~-------- 525 (711)
|...+.+++|||||++|+.++.+ .+|++||+.+++.+.... +...+.+++|+|+ +.|+.++.++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~ 238 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQA 238 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCceeccEEEECC-CEEEEEEecCccccccccc
Confidence 33468899999999999877654 469999999988765321 2222357899999 99998887654
Q ss_pred ------EEEEECCCCce--eEEeec--CCCCeeEEEEcCCCCEEEEEEcCC-----cEEEEECCCC--cEEEEeeCCCCC
Q psy14440 526 ------ARLWATDSYHP--LRLFVG--HYSDVDCVQFHPNSNYVATGSSDR-----TIRLWDCVTG--SHVRLLTGHKAP 588 (711)
Q Consensus 526 ------i~lwd~~~~~~--~~~~~~--h~~~V~~v~~sp~~~~latgs~Dg-----~I~iwD~~~~--~~v~~~~~h~~~ 588 (711)
|++|++.++.. ...+.. +...+..+.|+|+|++|+..+.++ .|++||+.++ ++.+.+..+...
T Consensus 239 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 318 (741)
T 1yr2_A 239 LNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA 318 (741)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS
T ss_pred CCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc
Confidence 88999987652 233333 233588999999999999887654 7999999887 424555555555
Q ss_pred eEEEEEecCCCEEEEEeCC----CcEEEEECCCC--eEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCC
Q psy14440 589 VYALSFSVCGRFLASAGGD----GNVHMWDLSNG--HLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFA 658 (711)
Q Consensus 589 I~~la~spdg~~Lasgs~D----g~I~iwDl~sg--~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~ 658 (711)
+... ++++|+.|+..+.+ +.|.+||+.++ +....+..+...+.+++|+ ++.++++...||..+||.+.
T Consensus 319 ~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 319 QWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp CEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEE
T ss_pred eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 5555 35889988877653 45999999884 4444455555667788888 66788888899988888664
No 206
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.50 E-value=3.4e-13 Score=145.79 Aligned_cols=172 Identities=16% Similarity=0.084 Sum_probs=140.8
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe-----------EEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEE
Q psy14440 462 PVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWR-----------CLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWA 530 (711)
Q Consensus 462 ~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~-----------~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd 530 (711)
.++.+++++...++++|+.++ +++|++...+ ..... .+.. |..++| ++.+++++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 689999999999999999986 6779875332 11222 3566 999999 88999999 889999999
Q ss_pred CCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcE
Q psy14440 531 TDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNV 610 (711)
Q Consensus 531 ~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I 610 (711)
+.+.........|...+.++.+.+. .+++++.||+|.+||+.++.... +...|+|++|||+| ++.|..||+|
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i 184 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSF 184 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCE
T ss_pred chhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcE
Confidence 9887766667778888888887654 38889999999999999887654 44689999999999 6789999999
Q ss_pred EEEECCCCeE--EEEe------e---CCCCCEEEEEEeCCCCEEEEEe
Q psy14440 611 HMWDLSNGHL--LTLL------T---GHTDVVRALCFSRDGNILASSG 647 (711)
Q Consensus 611 ~iwDl~sg~~--i~~l------~---~h~~~V~sl~fspdg~~Lasgs 647 (711)
++|+...+.. .+++ . +|...|.+|+|.+++.+|++-+
T Consensus 185 ~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 185 QSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp EEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred EEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 9999988776 5566 2 4778899999999999988743
No 207
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.47 E-value=7.8e-13 Score=142.94 Aligned_cols=182 Identities=12% Similarity=0.046 Sum_probs=140.5
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEEEEE
Q psy14440 389 QVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSF 468 (711)
Q Consensus 389 ~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~f 468 (711)
.++.+++++...++++|+.++ +++|++.... ...... ..+ .+.. ....+.+ |+.++|
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~--~~~~~~--------~~~----------~~~~-~~~~lp~-V~~l~f 95 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLR--DHITSD--------STP----------LTFK-WEKEIPD-VIFVCF 95 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHH--HHHHSS--------SCC----------CCCS-EEEECTT-EEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhh--hhhccc--------ccc----------ccce-EEeeCCC-eeEEEE
Confidence 588999999999999999986 6669874321 000000 000 1111 1223566 999999
Q ss_pred cCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEeecCCCCee
Q psy14440 469 SPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVD 548 (711)
Q Consensus 469 spdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~~~V~ 548 (711)
|+++|+++ .++.|++||+.+.........|...+.++.+.+. .+++++.||.+.+||+.++.... +...|+
T Consensus 96 --d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs 166 (388)
T 1xip_A 96 --HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVT 166 (388)
T ss_dssp --ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEE
T ss_pred --CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCce
Confidence 89999999 8899999999877766667778888998888754 38899999999999999877643 346899
Q ss_pred EEEEcCCCCEEEEEEcCCcEEEEECCCCcE--EEEe------e---CCCCCeEEEEEecCCCEEEEE
Q psy14440 549 CVQFHPNSNYVATGSSDRTIRLWDCVTGSH--VRLL------T---GHKAPVYALSFSVCGRFLASA 604 (711)
Q Consensus 549 ~v~~sp~~~~latgs~Dg~I~iwD~~~~~~--v~~~------~---~h~~~I~~la~spdg~~Lasg 604 (711)
|++|+|+| ++.|..||+|++|+...+.. .+++ . +|...|.+|+|.+++.++++-
T Consensus 167 ~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 167 SFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred EEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 99999999 78899999999999887775 5566 2 478899999999999998874
No 208
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.46 E-value=5.5e-11 Score=125.96 Aligned_cols=222 Identities=13% Similarity=0.025 Sum_probs=154.8
Q ss_pred ceEEEEECCC-CCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEEEE
Q psy14440 389 QVTCAEISED-VSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLS 467 (711)
Q Consensus 389 ~V~~l~fs~d-g~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~ 467 (711)
-..+.+|+++ +.+++++..++.|.+|+..+++.. .+. +...+.+++
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~--------------------------------~~~-~~~~v~~i~ 96 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT--------------------------------VHA-LPFMGSALA 96 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE--------------------------------EEE-CSSCEEEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE--------------------------------EEE-CCCcceEEE
Confidence 4567889997 456667777788888887543221 111 234689999
Q ss_pred EcCCCCEEEEEeCCCeEEEEECCCCeEEEEEec----CCCCEEEEEEcCCCCEEEEEEC------CCeEEEEECCCCcee
Q psy14440 468 FSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKG----HGHPVWDIKFSPHGYYFASAGH------DRMARLWATDSYHPL 537 (711)
Q Consensus 468 fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~----h~~~V~~v~~sp~g~~l~sgs~------Dg~i~lwd~~~~~~~ 537 (711)
|+++|++++++ .+ .|.+||..+++....... ....+.+++++++|+++++... .+.|..++ +++.
T Consensus 97 ~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~- 171 (326)
T 2ghs_A 97 KISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKV- 171 (326)
T ss_dssp EEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEE-
T ss_pred EeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcE-
Confidence 99999876654 44 499999988775443321 1245889999999987665542 24555555 4443
Q ss_pred EEeecCCCCeeEEEEcCCCCEEEEEE-cCCcEEEEECC--CC-c-----EEEEeeCCCCCeEEEEEecCCCEEEEEeCCC
Q psy14440 538 RLFVGHYSDVDCVQFHPNSNYVATGS-SDRTIRLWDCV--TG-S-----HVRLLTGHKAPVYALSFSVCGRFLASAGGDG 608 (711)
Q Consensus 538 ~~~~~h~~~V~~v~~sp~~~~latgs-~Dg~I~iwD~~--~~-~-----~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg 608 (711)
..+..+......++|+++++.++.+. .++.|.+||+. +| . .+..+.........++++++|+++++...++
T Consensus 172 ~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~ 251 (326)
T 2ghs_A 172 TKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEG 251 (326)
T ss_dssp EEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTT
T ss_pred EEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCC
Confidence 33333344578999999998776554 56899999986 56 3 1223333445678899999998877776778
Q ss_pred cEEEEECCCCeEEEEeeCCCCCEEEEEEe-CCCCEEEEEeCC
Q psy14440 609 NVHMWDLSNGHLLTLLTGHTDVVRALCFS-RDGNILASSGQD 649 (711)
Q Consensus 609 ~I~iwDl~sg~~i~~l~~h~~~V~sl~fs-pdg~~Lasgs~D 649 (711)
.|.+||. +++.+..+..+...+++++|+ ++++.|+.++..
T Consensus 252 ~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 252 AVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp EEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred EEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEecC
Confidence 9999998 688888888777789999998 888877655543
No 209
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.45 E-value=9.6e-12 Score=145.77 Aligned_cols=237 Identities=13% Similarity=0.073 Sum_probs=160.4
Q ss_pred CCCceEEEEECCCCCEEEEEeC-----CCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEE-eecc
Q psy14440 386 ARQQVTCAEISEDVSILAVGFS-----ESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRT-LVGH 459 (711)
Q Consensus 386 h~~~V~~l~fs~dg~~LatG~~-----dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-l~~h 459 (711)
|...|..++|||||++||.+.. ...|++||+.+++ .... +.+
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~-------------------------------~~~~~~~~- 174 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQ-------------------------------PLETPLKD- 174 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCS-------------------------------EEEEEEEE-
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCC-------------------------------CCccccCC-
Confidence 3456888899999999986442 2456777765443 2211 111
Q ss_pred cCCEEEEEEcCCCCEEEEEeCCCe-------------EEEEECCCCeE--EEEEec---CCCCEEEEEEcCCCCEEEEEE
Q psy14440 460 EGPVRKLSFSPDRSLLLSCSQDNT-------------IRLWSLLLWRC--LVVYKG---HGHPVWDIKFSPHGYYFASAG 521 (711)
Q Consensus 460 ~~~V~~l~fspdg~~L~s~s~Dg~-------------V~iwdl~t~~~--~~~~~~---h~~~V~~v~~sp~g~~l~sgs 521 (711)
....+++|+ ||+.|+.++.+.. |++|++.+... ...+.. |...+.++.|+++|++++...
T Consensus 175 -~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~ 252 (693)
T 3iuj_A 175 -VKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISA 252 (693)
T ss_dssp -EESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEE
T ss_pred -ceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEE
Confidence 112467899 9999998887743 99999976542 333432 445678899999999886554
Q ss_pred C----CCeEEEEECCCCc-eeEEeecCCCCeeEEEEcCCCCEEEEEEc-C---CcEEEEECCCCcE--EEEeeCCCCCeE
Q psy14440 522 H----DRMARLWATDSYH-PLRLFVGHYSDVDCVQFHPNSNYVATGSS-D---RTIRLWDCVTGSH--VRLLTGHKAPVY 590 (711)
Q Consensus 522 ~----Dg~i~lwd~~~~~-~~~~~~~h~~~V~~v~~sp~~~~latgs~-D---g~I~iwD~~~~~~--v~~~~~h~~~I~ 590 (711)
. +..+++||++++. ..+.+..+....... |++++..|+..+. + +.|.++|+.++.. .+.+..|...+.
T Consensus 253 ~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~ 331 (693)
T 3iuj_A 253 ANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL 331 (693)
T ss_dssp ESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE
T ss_pred ccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE
Confidence 2 3589999998763 455566666655555 5666666655443 3 5799999988754 355666766665
Q ss_pred EEEEecCCCEEEEEeCCC---cEEEEECCCCeEEEEee-CCCCCEEEEEEeCCCCEEEEEeCC----CcEEEEeCCCC
Q psy14440 591 ALSFSVCGRFLASAGGDG---NVHMWDLSNGHLLTLLT-GHTDVVRALCFSRDGNILASSGQD----CSVKLWDFAKL 660 (711)
Q Consensus 591 ~la~spdg~~Lasgs~Dg---~I~iwDl~sg~~i~~l~-~h~~~V~sl~fspdg~~Lasgs~D----g~V~iWdl~~~ 660 (711)
.|++++++|+....++ .|++||+..+. ...+. ...+.+..++++++++.|+....+ ++|..||+.+.
T Consensus 332 --~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g 406 (693)
T 3iuj_A 332 --TVHSGSGYLFAEYMVDATARVEQFDYEGKR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSG 406 (693)
T ss_dssp --EEEEETTEEEEEEEETTEEEEEEECTTSCE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTC
T ss_pred --EEEEECCEEEEEEEECCeeEEEEEECCCCe-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCC
Confidence 8999999888766543 78999987544 44443 344567788888888766655444 78999998654
No 210
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.45 E-value=2.6e-10 Score=117.47 Aligned_cols=218 Identities=10% Similarity=0.001 Sum_probs=159.2
Q ss_pred ccCCcEEEEEecCCCeeEE-EeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEE-EecCCCCEEEEEEcCC
Q psy14440 436 ECDDILVRIMDERNAETTR-TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV-YKGHGHPVWDIKFSPH 513 (711)
Q Consensus 436 ~~~d~~i~i~d~~~~~~~~-~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~-~~~h~~~V~~v~~sp~ 513 (711)
...++.|.+++.. ++... .+..+...+.+++++++|+.+++...++.|..||.. ++.... .......+.++++.++
T Consensus 37 ~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~ 114 (300)
T 2qc5_A 37 QHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLN 114 (300)
T ss_dssp ETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECST
T ss_pred cCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCC
Confidence 3346778888876 44433 222344679999999999877777668899999988 554322 2223467899999999
Q ss_pred CCEEEEEECCCeEEEEECCCCceeEE-eecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEE-eeCCCCCeEE
Q psy14440 514 GYYFASAGHDRMARLWATDSYHPLRL-FVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRL-LTGHKAPVYA 591 (711)
Q Consensus 514 g~~l~sgs~Dg~i~lwd~~~~~~~~~-~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~-~~~h~~~I~~ 591 (711)
|+++++...++.|..|+.+ ++.... +......+.+++++++++.+++...++.|..||. +++.... ...+...+.+
T Consensus 115 g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~ 192 (300)
T 2qc5_A 115 GDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVG 192 (300)
T ss_dssp TCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEE
T ss_pred CCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcce
Confidence 9888887778899999987 554432 2334567899999999996666666788999998 6654432 2234567899
Q ss_pred EEEecCCCEEEEEeCCCcEEEEECCCCeEEEE-eeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCC
Q psy14440 592 LSFSVCGRFLASAGGDGNVHMWDLSNGHLLTL-LTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFA 658 (711)
Q Consensus 592 la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~-l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~ 658 (711)
++++++|+++++....+.|.+||. +++.... +..+...+.+++++++|+++++...++.|..||..
T Consensus 193 i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 193 ITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITND 259 (300)
T ss_dssp EEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred EEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCC
Confidence 999999987777767788999998 5654433 33445678999999999977777677899999873
No 211
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.45 E-value=3.8e-11 Score=125.09 Aligned_cols=197 Identities=12% Similarity=0.075 Sum_probs=141.6
Q ss_pred cccCCEEEEEEcCCCCEEEE-------EeCCCeEEEEECCCCeEEEEEe----cCCCCEEEEEEcCC-CCEEEEEECCCe
Q psy14440 458 GHEGPVRKLSFSPDRSLLLS-------CSQDNTIRLWSLLLWRCLVVYK----GHGHPVWDIKFSPH-GYYFASAGHDRM 525 (711)
Q Consensus 458 ~h~~~V~~l~fspdg~~L~s-------~s~Dg~V~iwdl~t~~~~~~~~----~h~~~V~~v~~sp~-g~~l~sgs~Dg~ 525 (711)
..-....+++|+++++.+++ ++.++.|.+||..+++...... ++...+.+++++++ |++++ ++..+.
T Consensus 15 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v-~~~~~~ 93 (314)
T 1pjx_A 15 EDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFV-ADMRLG 93 (314)
T ss_dssp CCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEE-EETTTE
T ss_pred ccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEE-EECCCC
Confidence 33445689999999987777 5778999999988777543322 24467899999999 65444 444557
Q ss_pred EEEEECCCCceeEE-eec----CCCCeeEEEEcCCCCEEEEEEcC---------------CcEEEEECCCCcEEEEeeCC
Q psy14440 526 ARLWATDSYHPLRL-FVG----HYSDVDCVQFHPNSNYVATGSSD---------------RTIRLWDCVTGSHVRLLTGH 585 (711)
Q Consensus 526 i~lwd~~~~~~~~~-~~~----h~~~V~~v~~sp~~~~latgs~D---------------g~I~iwD~~~~~~v~~~~~h 585 (711)
|.+||.+ ++.... ... ....+.+++++++|+++++...+ +.|..||.. ++.... ..+
T Consensus 94 l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~-~~~ 170 (314)
T 1pjx_A 94 LLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV-DTA 170 (314)
T ss_dssp EEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE-EEE
T ss_pred EEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe-ccC
Confidence 9999998 654433 221 12358899999999888777655 567777765 554433 334
Q ss_pred CCCeEEEEEe----cCCCEEEEE-eCCCcEEEEECC-CCe-----EEEEeeCCC-CCEEEEEEeCCCCEEEEEeCCCcEE
Q psy14440 586 KAPVYALSFS----VCGRFLASA-GGDGNVHMWDLS-NGH-----LLTLLTGHT-DVVRALCFSRDGNILASSGQDCSVK 653 (711)
Q Consensus 586 ~~~I~~la~s----pdg~~Lasg-s~Dg~I~iwDl~-sg~-----~i~~l~~h~-~~V~sl~fspdg~~Lasgs~Dg~V~ 653 (711)
......++|+ ++|+.|+.+ ..++.|.+||+. +++ ....+.++. ..+..++++++|+++++...++.|.
T Consensus 171 ~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~ 250 (314)
T 1pjx_A 171 FQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIE 250 (314)
T ss_dssp ESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEE
T ss_pred CCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEE
Confidence 4557899999 999766555 467899999986 554 233344444 6688999999999998888889999
Q ss_pred EEeCC
Q psy14440 654 LWDFA 658 (711)
Q Consensus 654 iWdl~ 658 (711)
+||..
T Consensus 251 ~~d~~ 255 (314)
T 1pjx_A 251 VFGPD 255 (314)
T ss_dssp EECTT
T ss_pred EEcCC
Confidence 99975
No 212
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.44 E-value=2.2e-11 Score=127.54 Aligned_cols=234 Identities=12% Similarity=0.093 Sum_probs=162.5
Q ss_pred EEEEecCCCceEEEEECCCCC-EEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeec
Q psy14440 380 CYTLLNARQQVTCAEISEDVS-ILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVG 458 (711)
Q Consensus 380 ~~tl~~h~~~V~~l~fs~dg~-~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~ 458 (711)
+..+........+..|+++|+ +++++..++.|..|+..+ . ...+..
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g-~--------------------------------~~~~~~ 83 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDG-T--------------------------------VDVLLD 83 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTS-C--------------------------------EEEEEE
T ss_pred eEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCC-C--------------------------------EEEEeC
Confidence 344555666778999999998 677777788888887632 1 122333
Q ss_pred ccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecC----CCCEEEEEEcCCCCEEEE----EEC--------
Q psy14440 459 HEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGH----GHPVWDIKFSPHGYYFAS----AGH-------- 522 (711)
Q Consensus 459 h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h----~~~V~~v~~sp~g~~l~s----gs~-------- 522 (711)
+.+.+.+++++++|+++++...++.|.+|+.. ++........ ...+.+++++++|+++++ |+.
T Consensus 84 ~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~ 162 (305)
T 3dr2_A 84 ATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPA 162 (305)
T ss_dssp SCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCC
T ss_pred CCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccccccccc
Confidence 55678999999999866665566889999986 5533322111 234678999999998876 332
Q ss_pred -----CCeEEEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcC------CcEEEEECCCCcE--EEEe-eCCCCC
Q psy14440 523 -----DRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSD------RTIRLWDCVTGSH--VRLL-TGHKAP 588 (711)
Q Consensus 523 -----Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~D------g~I~iwD~~~~~~--v~~~-~~h~~~ 588 (711)
.+.|..||..+++..... .......++|+|+++.|+++... +.|.+||+..+.. .+.+ ....+.
T Consensus 163 ~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~ 240 (305)
T 3dr2_A 163 DPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGL 240 (305)
T ss_dssp CCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSC
T ss_pred ccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCC
Confidence 256777777666654433 44567889999999988887765 6899999876541 1122 122345
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEE
Q psy14440 589 VYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVK 653 (711)
Q Consensus 589 I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~ 653 (711)
...++++++|++. +++.+ .|.+||. +|+.+..+..+. .+.+++|+++++.|+.++.++..+
T Consensus 241 pdgi~~d~~G~lw-v~~~~-gv~~~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 241 PDGFCVDRGGWLW-SSSGT-GVCVFDS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp CCSEEECTTSCEE-ECCSS-EEEEECT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEE
T ss_pred CCeEEECCCCCEE-EecCC-cEEEECC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEE
Confidence 5678999999954 44444 4999997 678887777655 588999999999888888764433
No 213
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.43 E-value=2.6e-10 Score=123.33 Aligned_cols=217 Identities=9% Similarity=-0.081 Sum_probs=148.2
Q ss_pred CcEEEEEecCCCeeEEEeecc-------cCCEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCeEEEE-EecCCCCEEEE
Q psy14440 439 DILVRIMDERNAETTRTLVGH-------EGPVRKLSFSPDRSLLLSCSQ--DNTIRLWSLLLWRCLVV-YKGHGHPVWDI 508 (711)
Q Consensus 439 d~~i~i~d~~~~~~~~~l~~h-------~~~V~~l~fspdg~~L~s~s~--Dg~V~iwdl~t~~~~~~-~~~h~~~V~~v 508 (711)
++.+.++|..+.+.+..+... ...-..+.|+|||++|++++. +++|.++| .+++.+.. +... . ++
T Consensus 96 ~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~---~~ 170 (373)
T 2mad_H 96 TDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-T---CY 170 (373)
T ss_pred CCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-c---eE
Confidence 456677777666665554321 123458999999999999874 47899999 99988777 5432 2 23
Q ss_pred EEcCCC-CEEEEEECCCeEEEEECCCCceeEEee-----cCCCC-eeEEEEcCCCCEEEEEEcCCcEEEEECCCCc--EE
Q psy14440 509 KFSPHG-YYFASAGHDRMARLWATDSYHPLRLFV-----GHYSD-VDCVQFHPNSNYVATGSSDRTIRLWDCVTGS--HV 579 (711)
Q Consensus 509 ~~sp~g-~~l~sgs~Dg~i~lwd~~~~~~~~~~~-----~h~~~-V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~--~v 579 (711)
.+.+.+ +.+++.+.||.+.+||. +++...... ..... .....+.+++..++..+.++.|.+.|+.++. .+
T Consensus 171 ~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~ 249 (373)
T 2mad_H 171 HIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNK 249 (373)
T ss_pred EEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEe
Confidence 444544 46677778999999999 777663321 11111 1234556666555555578899999987653 22
Q ss_pred EEeeC----------CCCCeEEEEEecCCCEEEEEeC----------CCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCC
Q psy14440 580 RLLTG----------HKAPVYALSFSVCGRFLASAGG----------DGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRD 639 (711)
Q Consensus 580 ~~~~~----------h~~~I~~la~spdg~~Lasgs~----------Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspd 639 (711)
..+.- .......++++++++.|+++.. ++.|.++|+.+++.+..+.. ....++++|++|
T Consensus 250 ~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~D 328 (373)
T 2mad_H 250 APIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQD 328 (373)
T ss_pred eeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCC
Confidence 22211 1123445789999998887653 35799999999999998864 335789999999
Q ss_pred CC-EEEEEe-CCCcEEEEeCCCCCC
Q psy14440 640 GN-ILASSG-QDCSVKLWDFAKLSD 662 (711)
Q Consensus 640 g~-~Lasgs-~Dg~V~iWdl~~~~~ 662 (711)
|+ .++++. .+++|.|||+.+.+.
T Consensus 329 g~~~l~v~~~~~~~V~ViD~~t~~v 353 (373)
T 2mad_H 329 GGPDLYALSAGTEVLHIYDAGAGDQ 353 (373)
T ss_pred CCeEEEEEcCCCCeEEEEECCCCCE
Confidence 99 788777 589999999987543
No 214
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.41 E-value=3.7e-10 Score=123.66 Aligned_cols=195 Identities=13% Similarity=0.109 Sum_probs=144.1
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCC--eEEEEECCCCceeE
Q psy14440 461 GPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDR--MARLWATDSYHPLR 538 (711)
Q Consensus 461 ~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg--~i~lwd~~~~~~~~ 538 (711)
....+++|+++++++++...++.|++||..++........... .. ++|+++++.++++..++ .|.+|+...+...+
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 4678999999998777777789999999998887766655333 33 99999999988888766 78999887665544
Q ss_pred Ee----ecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEE----eeCCCCCe--EEEEEecC-CCEEEEEeCC
Q psy14440 539 LF----VGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRL----LTGHKAPV--YALSFSVC-GRFLASAGGD 607 (711)
Q Consensus 539 ~~----~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~----~~~h~~~I--~~la~spd-g~~Lasgs~D 607 (711)
.+ ......+.+++++|++..|+++..++.|+.||..++..... ..++...- ..++|+|+ +.++++...+
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~ 288 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL 288 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCC
Confidence 44 22456788999999555666677788999999987764333 22332222 39999995 5556666678
Q ss_pred CcEEEEECCCCeEEEEeeCCC---------------CCEEEEEEeCCCCEEEEEe-CCCcEEEEeCCC
Q psy14440 608 GNVHMWDLSNGHLLTLLTGHT---------------DVVRALCFSRDGNILASSG-QDCSVKLWDFAK 659 (711)
Q Consensus 608 g~I~iwDl~sg~~i~~l~~h~---------------~~V~sl~fspdg~~Lasgs-~Dg~V~iWdl~~ 659 (711)
++|+.||.... +..+.++. .....++|+++|+++++-+ .+++|+.||+..
T Consensus 289 ~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~ 354 (409)
T 3hrp_A 289 SSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILD 354 (409)
T ss_dssp TEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTT
T ss_pred CEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCC
Confidence 89999997543 33333332 3478999999999888877 889999999754
No 215
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.40 E-value=2.9e-10 Score=118.52 Aligned_cols=219 Identities=11% Similarity=0.100 Sum_probs=148.2
Q ss_pred ccCCEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCcee
Q psy14440 459 HEGPVRKLSFSPDRS-LLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPL 537 (711)
Q Consensus 459 h~~~V~~l~fspdg~-~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~ 537 (711)
+..-..+..|++++. .+++...++.|..||..++.. ..+. ....+.+++++++|+++++ . ++.|.+||.++++..
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAV 86 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEE
Confidence 344566889999655 555666788999999987765 3333 4567999999999995554 4 578999999877644
Q ss_pred EEeec----CCCCeeEEEEcCCCCEEEEEEcC---------CcEEEEECCC-CcEEEEeeCCCCCeEEEEEecCCCEEEE
Q psy14440 538 RLFVG----HYSDVDCVQFHPNSNYVATGSSD---------RTIRLWDCVT-GSHVRLLTGHKAPVYALSFSVCGRFLAS 603 (711)
Q Consensus 538 ~~~~~----h~~~V~~v~~sp~~~~latgs~D---------g~I~iwD~~~-~~~v~~~~~h~~~I~~la~spdg~~Las 603 (711)
..... ....+..++++++|+++++...+ ....||.+.. ++. ..+..+....+.++|++||+.|+.
T Consensus 87 ~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~-~~~~~~~~~pngi~~spdg~~lyv 165 (297)
T 3g4e_A 87 VLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHV-KKYFDQVDISNGLDWSLDHKIFYY 165 (297)
T ss_dssp EEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCE-EEEEEEESBEEEEEECTTSCEEEE
T ss_pred EEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCE-EEEeeccccccceEEcCCCCEEEE
Confidence 33322 12347889999999976655332 2345555443 333 333334455789999999997755
Q ss_pred -EeCCCcEEEEEC--CCCeE-----EEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCCccCcccccccccc
Q psy14440 604 -AGGDGNVHMWDL--SNGHL-----LTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSA 675 (711)
Q Consensus 604 -gs~Dg~I~iwDl--~sg~~-----i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~~~~~~~ 675 (711)
.+.++.|.+||+ .+|.. +..+..+.+....++++++|++.++...++.|.+||..+.
T Consensus 166 ~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG--------------- 230 (297)
T 3g4e_A 166 IDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTG--------------- 230 (297)
T ss_dssp EEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTC---------------
T ss_pred ecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCc---------------
Confidence 455789999987 45643 2233334467889999999998888888889999997532
Q ss_pred ccccccccceeeecccCCcceEEEEEc-cCC
Q psy14440 676 DIKNSSLAYLVRSYKTKASPLLHLIFS-RRN 705 (711)
Q Consensus 676 ~~~~~~~~~~l~~~~t~~~pV~~v~Fs-~~n 705 (711)
.++..+......+.+++|+ +++
T Consensus 231 --------~~~~~i~~p~~~~t~~~f~g~d~ 253 (297)
T 3g4e_A 231 --------KRLQTVKLPVDKTTSCCFGGKNY 253 (297)
T ss_dssp --------CEEEEEECSSSBEEEEEEESGGG
T ss_pred --------eEEEEEECCCCCceEEEEeCCCC
Confidence 2333444444567788887 543
No 216
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.37 E-value=1.8e-10 Score=124.04 Aligned_cols=263 Identities=12% Similarity=0.004 Sum_probs=176.6
Q ss_pred EECCCCCEEEEEeC-----CCeEEEEeCCCCceee---------eccCcccccccccc----------CCcEEEEEecCC
Q psy14440 394 EISEDVSILAVGFS-----ESYIKLWSLVPQKLKA---------MKSSDQLQDIEMEC----------DDILVRIMDERN 449 (711)
Q Consensus 394 ~fs~dg~~LatG~~-----dg~I~vWdl~~~~~~~---------~~~~~~~~~l~~~~----------~d~~i~i~d~~~ 449 (711)
...||++.+.+... ++.|.+.|..+.++.. +..+++...+.+.. .++.|.+||..+
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t 118 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT 118 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCcEEECCCCCEEEEEcccccccccCCCCCEEEEEECCC
Confidence 34577776666654 4678888877655332 33345555554443 356788899888
Q ss_pred CeeEEEeeccc-------CCEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEE
Q psy14440 450 AETTRTLVGHE-------GPVRKLSFSPDRSLLLSCSQ--DNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASA 520 (711)
Q Consensus 450 ~~~~~~l~~h~-------~~V~~l~fspdg~~L~s~s~--Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sg 520 (711)
.+.+..+.-.. ..-..+.|++||++|+++.. +++|.++|+.+++.+..+.... . ...+....+.|++.
T Consensus 119 ~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~~ 195 (386)
T 3sjl_D 119 LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFFMH 195 (386)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEETTEEEEE
T ss_pred CeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeecCCCceeEEE
Confidence 88877764221 13457999999999998874 6899999999999999886422 1 12233345678888
Q ss_pred ECCCeEEEEECCC-CceeEEeecCC----CCe-eEEEEc-CCCCEEEEEEcCCcEEEEECCCCcE--EEEee--------
Q psy14440 521 GHDRMARLWATDS-YHPLRLFVGHY----SDV-DCVQFH-PNSNYVATGSSDRTIRLWDCVTGSH--VRLLT-------- 583 (711)
Q Consensus 521 s~Dg~i~lwd~~~-~~~~~~~~~h~----~~V-~~v~~s-p~~~~latgs~Dg~I~iwD~~~~~~--v~~~~-------- 583 (711)
+.||++.+.++.+ ++.......+. ..+ ....|. ++|++++ .+.+|+|.+.|+.++.. +..+.
T Consensus 196 ~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~ 274 (386)
T 3sjl_D 196 CRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERA 274 (386)
T ss_dssp ETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHH
T ss_pred CCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceecccccccc
Confidence 8999999999876 55432221111 111 124564 5665544 56689999999976642 22221
Q ss_pred -C-CCCCeEEEEEecCCCEEEEEeC----------CCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCC-EEEEE-eCC
Q psy14440 584 -G-HKAPVYALSFSVCGRFLASAGG----------DGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGN-ILASS-GQD 649 (711)
Q Consensus 584 -~-h~~~I~~la~spdg~~Lasgs~----------Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~-~Lasg-s~D 649 (711)
+ ..+....++++++++.++.... .+.|.++|+.+++.+..+..- ..+++|++++|++ +|+++ ..+
T Consensus 275 ~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~ 353 (386)
T 3sjl_D 275 DGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGD 353 (386)
T ss_dssp TTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSSSSCEEEEEETTT
T ss_pred ccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCCCCeEEEEEcCCC
Confidence 0 1223445788999998887643 257999999999999888632 3678999999997 66664 458
Q ss_pred CcEEEEeCCCCC
Q psy14440 650 CSVKLWDFAKLS 661 (711)
Q Consensus 650 g~V~iWdl~~~~ 661 (711)
+.|.++|..+.+
T Consensus 354 ~~VsViD~~t~k 365 (386)
T 3sjl_D 354 KTLYIHDAESGE 365 (386)
T ss_dssp TEEEEEETTTCC
T ss_pred CeEEEEECCCCc
Confidence 999999987643
No 217
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.35 E-value=6.6e-11 Score=126.25 Aligned_cols=244 Identities=9% Similarity=0.006 Sum_probs=164.5
Q ss_pred CceEEEEECCCCCEEEEEe--CCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEE
Q psy14440 388 QQVTCAEISEDVSILAVGF--SESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRK 465 (711)
Q Consensus 388 ~~V~~l~fs~dg~~LatG~--~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~ 465 (711)
.....++++++|+++++.. .++.++||.+.+.++... -.... ...+|...+.+
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~---------------------p~~~~----~~~~~~~~p~g 71 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPF---------------------PPQSG----NAIITFDTVLG 71 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEES---------------------CCCCS----SCCCCCSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecC---------------------CCccc----CcccceeEeeE
Confidence 6899999999999998864 234366666532222110 00000 01246678999
Q ss_pred EEEcCCCCEEEEEeC-----CCeEEEEECCCCeEEEEEecC------CCCEEEEEEcCCC-CEEEEEE---CCCeEEEEE
Q psy14440 466 LSFSPDRSLLLSCSQ-----DNTIRLWSLLLWRCLVVYKGH------GHPVWDIKFSPHG-YYFASAG---HDRMARLWA 530 (711)
Q Consensus 466 l~fspdg~~L~s~s~-----Dg~V~iwdl~t~~~~~~~~~h------~~~V~~v~~sp~g-~~l~sgs---~Dg~i~lwd 530 (711)
++++++++++++-+. ++.|.+||+.+++.+..+... ...+.++++++++ ..+++.+ .++.|.+||
T Consensus 72 v~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d 151 (343)
T 2qe8_A 72 IKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVD 151 (343)
T ss_dssp EEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEE
T ss_pred EEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEE
Confidence 999999876555433 578999999999987777532 2356889999754 4445555 678999999
Q ss_pred CCCCceeEEeecCC-----------------------------CCeeEEEEcCCCCEEEEEEcCC-cEEEEECC---CCc
Q psy14440 531 TDSYHPLRLFVGHY-----------------------------SDVDCVQFHPNSNYVATGSSDR-TIRLWDCV---TGS 577 (711)
Q Consensus 531 ~~~~~~~~~~~~h~-----------------------------~~V~~v~~sp~~~~latgs~Dg-~I~iwD~~---~~~ 577 (711)
..+++..+.+.+|. ..+..|+|+|+++.|+++..++ .|..++.. .+.
T Consensus 152 ~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~ 231 (343)
T 2qe8_A 152 LQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQ 231 (343)
T ss_dssp TTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTT
T ss_pred CCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCC
Confidence 99887766654421 2357899999999988887766 44444421 111
Q ss_pred -----EEE--EeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeC-CCCCEEEEEEeCCCCEEEEEeCC
Q psy14440 578 -----HVR--LLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTG-HTDVVRALCFSRDGNILASSGQD 649 (711)
Q Consensus 578 -----~v~--~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~-h~~~V~sl~fspdg~~Lasgs~D 649 (711)
... ...++.+....++++++|+++++...++.|.+||..+|+....... +...+.+++|.++|+++++.+..
T Consensus 232 ~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 232 LTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp CCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCG
T ss_pred CChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcc
Confidence 000 1123444567799999999999988899999999866775443332 24568999999999988887765
Q ss_pred CcEEEEe
Q psy14440 650 CSVKLWD 656 (711)
Q Consensus 650 g~V~iWd 656 (711)
+.+.+|+
T Consensus 312 ~~~~~f~ 318 (343)
T 2qe8_A 312 HHSAPLN 318 (343)
T ss_dssp GGSGGGB
T ss_pred ccccccc
Confidence 5554443
No 218
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.33 E-value=1.6e-09 Score=114.63 Aligned_cols=189 Identities=12% Similarity=-0.032 Sum_probs=133.3
Q ss_pred CEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEe
Q psy14440 462 PVRKLSFSPDRS-LLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLF 540 (711)
Q Consensus 462 ~V~~l~fspdg~-~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~ 540 (711)
-..+..|++++. .+++...++.|.+||..+++.. .+. ....+.+++|+++|+++++. . ..|.+||.++++.....
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLHA 125 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEEe
Confidence 356789999755 5556667889999999887653 333 35679999999999776654 4 45999999887654332
Q ss_pred ec----CCCCeeEEEEcCCCCEEEEEEc------CCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEE-eCCCc
Q psy14440 541 VG----HYSDVDCVQFHPNSNYVATGSS------DRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASA-GGDGN 609 (711)
Q Consensus 541 ~~----h~~~V~~v~~sp~~~~latgs~------Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasg-s~Dg~ 609 (711)
.. ....+.+++++++|+++++... .+.|..+| +++.. .+..+....+.++|+++|+.|+.+ +.++.
T Consensus 126 ~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~ 202 (326)
T 2ghs_A 126 ELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADISIPNSICFSPDGTTGYFVDTKVNR 202 (326)
T ss_dssp CSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEESSEEEEEECTTSCEEEEEETTTCE
T ss_pred eCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCcccCCeEEcCCCCEEEEEECCCCE
Confidence 21 1235889999999997665543 24566666 55543 333334457899999999877655 45689
Q ss_pred EEEEECC--CC-e-----EEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeC
Q psy14440 610 VHMWDLS--NG-H-----LLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDF 657 (711)
Q Consensus 610 I~iwDl~--sg-~-----~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl 657 (711)
|.+||+. +| + .+..+....+.+.+++++++|+++++...++.|.+||.
T Consensus 203 I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~ 258 (326)
T 2ghs_A 203 LMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT 258 (326)
T ss_dssp EEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT
T ss_pred EEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC
Confidence 9999986 56 3 23334334456789999999998887777789999986
No 219
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.32 E-value=3.2e-09 Score=114.76 Aligned_cols=208 Identities=9% Similarity=-0.003 Sum_probs=138.2
Q ss_pred EEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEe----------CCCeEEEEECCCCeEEEEEecC-------CCCEE
Q psy14440 444 IMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCS----------QDNTIRLWSLLLWRCLVVYKGH-------GHPVW 506 (711)
Q Consensus 444 i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s----------~Dg~V~iwdl~t~~~~~~~~~h-------~~~V~ 506 (711)
++|..+++.+..+.....+ .++++|||++|+++. .++.|.+||..+++.+..+... ...-.
T Consensus 51 v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~ 128 (373)
T 2mad_H 51 VLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSW 128 (373)
T ss_pred EEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCcc
Confidence 3333444444455443444 999999999999886 3678999999988887766532 12345
Q ss_pred EEEEcCCCCEEEEEEC--CCeEEEEECCCCceeEE-eecCCCCeeEEEEcCCC-CEEEEEEcCCcEEEEECCCCcEEEEe
Q psy14440 507 DIKFSPHGYYFASAGH--DRMARLWATDSYHPLRL-FVGHYSDVDCVQFHPNS-NYVATGSSDRTIRLWDCVTGSHVRLL 582 (711)
Q Consensus 507 ~v~~sp~g~~l~sgs~--Dg~i~lwd~~~~~~~~~-~~~h~~~V~~v~~sp~~-~~latgs~Dg~I~iwD~~~~~~v~~~ 582 (711)
.+.|+|+|+++++++. ++.|.++| .+++.+.. +... .|+.+.+++ +.+++.+.||++.+||. +++.+...
T Consensus 129 ~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~----~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~ 202 (373)
T 2mad_H 129 MNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP----TCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAG 202 (373)
T ss_pred ceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC----ceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEE
Confidence 7999999999998874 57899999 99888776 5321 235555654 45566778999999999 88776332
Q ss_pred e-----CCCCC-eEEEEEecCCCEEEEEeCCCcEEEEECCCCe--EEEEeeCC----------CCCEEEEEEeCCCCEEE
Q psy14440 583 T-----GHKAP-VYALSFSVCGRFLASAGGDGNVHMWDLSNGH--LLTLLTGH----------TDVVRALCFSRDGNILA 644 (711)
Q Consensus 583 ~-----~h~~~-I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~--~i~~l~~h----------~~~V~sl~fspdg~~La 644 (711)
. ....+ .....+.+++..++..+..+.|.+.|+.++. .+..+... ......++++++++.|+
T Consensus 203 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~ly 282 (373)
T 2mad_H 203 LVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIY 282 (373)
T ss_pred eccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEE
Confidence 2 11122 2234566766555545577899999997653 33333211 12244578899888777
Q ss_pred EEeC----------CCcEEEEeCCC
Q psy14440 645 SSGQ----------DCSVKLWDFAK 659 (711)
Q Consensus 645 sgs~----------Dg~V~iWdl~~ 659 (711)
++.. ++.|.++|+.+
T Consensus 283 V~~~~~~~~~~~~~~~~V~VID~~t 307 (373)
T 2mad_H 283 LLTSEQSAWKLHAAAKEVTSVTGLV 307 (373)
T ss_pred EEeccCCcccccCCCCeEEEEECCC
Confidence 7643 35788888765
No 220
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.30 E-value=3e-10 Score=118.83 Aligned_cols=199 Identities=14% Similarity=0.068 Sum_probs=139.3
Q ss_pred eEEEeecccCCEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEE
Q psy14440 452 TTRTLVGHEGPVRKLSFSPDRS-LLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWA 530 (711)
Q Consensus 452 ~~~~l~~h~~~V~~l~fspdg~-~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd 530 (711)
.+..+..+.....+..|+++++ .++++..++.|..|+. +++ ...+..+...+..++++++|+++++...++.|.+|+
T Consensus 36 ~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSD 113 (305)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred ceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEEC
Confidence 3445555666788999999998 5666667889999998 444 345555677899999999998766665668899999
Q ss_pred CCCCceeEEeecC-----CCCeeEEEEcCCCCEEEE----EEc-------------CCcEEEEECCCCcEEEEeeCCCCC
Q psy14440 531 TDSYHPLRLFVGH-----YSDVDCVQFHPNSNYVAT----GSS-------------DRTIRLWDCVTGSHVRLLTGHKAP 588 (711)
Q Consensus 531 ~~~~~~~~~~~~h-----~~~V~~v~~sp~~~~lat----gs~-------------Dg~I~iwD~~~~~~v~~~~~h~~~ 588 (711)
.+ ++. ..+..+ ...+..++++++|+++++ |.. .+.|..||..+++..... ....
T Consensus 114 ~~-g~~-~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~ 189 (305)
T 3dr2_A 114 AD-GQA-HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDH 189 (305)
T ss_dssp TT-SCE-EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESS
T ss_pred CC-CCE-EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCC
Confidence 86 443 222211 234678999999998886 332 256888887777654443 4456
Q ss_pred eEEEEEecCCCEEEEEeCC------CcEEEEECCCCeEE--EEe-eCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCC
Q psy14440 589 VYALSFSVCGRFLASAGGD------GNVHMWDLSNGHLL--TLL-TGHTDVVRALCFSRDGNILASSGQDCSVKLWDFA 658 (711)
Q Consensus 589 I~~la~spdg~~Lasgs~D------g~I~iwDl~sg~~i--~~l-~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~ 658 (711)
.+.++|++||+.|+.+... +.|.+||+..+... ..+ ....+....++++++|++.++. .+ .|.+||..
T Consensus 190 p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~-gv~~~~~~ 266 (305)
T 3dr2_A 190 PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GT-GVCVFDSD 266 (305)
T ss_dssp EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC-SS-EEEEECTT
T ss_pred CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec-CC-cEEEECCC
Confidence 7889999999988877665 78999998765421 111 1123445678999999955544 44 48888863
No 221
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.26 E-value=5.7e-10 Score=122.10 Aligned_cols=219 Identities=9% Similarity=0.021 Sum_probs=145.5
Q ss_pred EEEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEe----------CCCeEEEEECCCCeEEEEEecC-------CC
Q psy14440 441 LVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCS----------QDNTIRLWSLLLWRCLVVYKGH-------GH 503 (711)
Q Consensus 441 ~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s----------~Dg~V~iwdl~t~~~~~~~~~h-------~~ 503 (711)
.|.++|..+.+.+.++..-..+ .+.++|||++|+++. .++.|.++|..+++.+..+... ..
T Consensus 100 ~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~ 177 (426)
T 3c75_H 100 QQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGT 177 (426)
T ss_dssp EEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSC
T ss_pred eEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCC
Confidence 4445555666666666644556 899999999988886 3678999999999988877532 12
Q ss_pred CEEEEEEcCCCCEEEEEEC--CCeEEEEECCCCceeEEeecCCC-------CeeEEEEcCCCCEE---------------
Q psy14440 504 PVWDIKFSPHGYYFASAGH--DRMARLWATDSYHPLRLFVGHYS-------DVDCVQFHPNSNYV--------------- 559 (711)
Q Consensus 504 ~V~~v~~sp~g~~l~sgs~--Dg~i~lwd~~~~~~~~~~~~h~~-------~V~~v~~sp~~~~l--------------- 559 (711)
....+.|+|+|++++++.. ++.|.++|+.+++.+..+.-... .-..+.++++|+++
T Consensus 178 ~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~ 257 (426)
T 3c75_H 178 YQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTE 257 (426)
T ss_dssp CGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECC
T ss_pred CcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeee
Confidence 3456899999999998874 58999999999887766643110 00112333333333
Q ss_pred ----------------------EEEEcCCcEEEEECCCCcEE--EEeeC----------CCCCeEEEEEecCCCEEEEEe
Q psy14440 560 ----------------------ATGSSDRTIRLWDCVTGSHV--RLLTG----------HKAPVYALSFSVCGRFLASAG 605 (711)
Q Consensus 560 ----------------------atgs~Dg~I~iwD~~~~~~v--~~~~~----------h~~~I~~la~spdg~~Lasgs 605 (711)
+..+..++|.+.|+..+... ..+.- .......++++++|+.++++.
T Consensus 258 ~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~ 337 (426)
T 3c75_H 258 VFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLV 337 (426)
T ss_dssp CCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEE
T ss_pred eeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEe
Confidence 22233334444444322211 00000 001112368999988777764
Q ss_pred C----------CCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCC-EEEEEe-CCCcEEEEeCCCCCC
Q psy14440 606 G----------DGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGN-ILASSG-QDCSVKLWDFAKLSD 662 (711)
Q Consensus 606 ~----------Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~-~Lasgs-~Dg~V~iWdl~~~~~ 662 (711)
. ++.|.++|+.+++.+.++... ...++++|++||+ +|+++. .+++|.|+|+.+.+.
T Consensus 338 ~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kv 405 (426)
T 3c75_H 338 DQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEE 405 (426)
T ss_dssp EECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred cccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCE
Confidence 2 357999999999999988642 2478999999999 888888 599999999987543
No 222
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.24 E-value=1.3e-09 Score=117.30 Aligned_cols=242 Identities=13% Similarity=0.074 Sum_probs=164.3
Q ss_pred EEEECCCCCEEEEEe----------CCCeEEEEeCCCCceee------------------eccCcccccccccc--CCcE
Q psy14440 392 CAEISEDVSILAVGF----------SESYIKLWSLVPQKLKA------------------MKSSDQLQDIEMEC--DDIL 441 (711)
Q Consensus 392 ~l~fs~dg~~LatG~----------~dg~I~vWdl~~~~~~~------------------~~~~~~~~~l~~~~--~d~~ 441 (711)
.+++||||++++++. .++.|.+||..+.++.. +..+.+...+.+.. .++.
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~ 161 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA 161 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe
Confidence 399999999887765 36789999998876543 22334555555544 2688
Q ss_pred EEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEEEecC----CCCEE-EEEEc-CCC
Q psy14440 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLL-WRCLVVYKGH----GHPVW-DIKFS-PHG 514 (711)
Q Consensus 442 i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t-~~~~~~~~~h----~~~V~-~v~~s-p~g 514 (711)
|.++|..+++.+.++.... + ...+....+.+++.+.||++.+.++.+ ++.......+ ..++. ...|. ++|
T Consensus 162 VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG 238 (386)
T 3sjl_D 162 VGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG 238 (386)
T ss_dssp EEEEETTTTEEEEEEECCS--E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTT
T ss_pred EEEEECCCCcEEEEEECCC--c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCC
Confidence 9999999999888875321 1 223333456777888899999999876 5543322111 12222 23554 567
Q ss_pred CEEEEEECCCeEEEEECCCCce--eEEee---------c-CCCCeeEEEEcCCCCEEEEEEc----------CCcEEEEE
Q psy14440 515 YYFASAGHDRMARLWATDSYHP--LRLFV---------G-HYSDVDCVQFHPNSNYVATGSS----------DRTIRLWD 572 (711)
Q Consensus 515 ~~l~sgs~Dg~i~lwd~~~~~~--~~~~~---------~-h~~~V~~v~~sp~~~~latgs~----------Dg~I~iwD 572 (711)
+++ ..+.+|++++.|..+... +..+. + .......++++++++.++.... .++|.++|
T Consensus 239 ~~~-~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD 317 (386)
T 3sjl_D 239 RLV-WPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLD 317 (386)
T ss_dssp EEE-EEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEE
T ss_pred cEE-EEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEE
Confidence 444 466689999999976542 22221 0 1234456788999988887653 25799999
Q ss_pred CCCCcEEEEeeCCCCCeEEEEEecCCC-EEEEE-eCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCC
Q psy14440 573 CVTGSHVRLLTGHKAPVYALSFSVCGR-FLASA-GGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRD 639 (711)
Q Consensus 573 ~~~~~~v~~~~~h~~~I~~la~spdg~-~Lasg-s~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspd 639 (711)
+.+++.++.+... ..+.+|++++||+ +|+++ ..++.|.++|..+++.++++..-. .-+.|.+++|
T Consensus 318 ~~t~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~-~p~~l~~s~d 384 (386)
T 3sjl_D 318 AKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLG-HGPQVITTAD 384 (386)
T ss_dssp TTTCCEEEEEEEE-EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCC-SSCCEEEECC
T ss_pred CCCCeEEEEEECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCC-CCceeEECCc
Confidence 9999999887632 3678999999997 66665 458999999999999999987432 2356677765
No 223
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.24 E-value=6.4e-10 Score=118.52 Aligned_cols=196 Identities=16% Similarity=0.118 Sum_probs=137.8
Q ss_pred CCEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCeEEEEE-------ecCCCCEEEEEEcCCCCEEEEEEC-----CCeE
Q psy14440 461 GPVRKLSFSPDRSLLLSCSQ--DNTIRLWSLLLWRCLVVY-------KGHGHPVWDIKFSPHGYYFASAGH-----DRMA 526 (711)
Q Consensus 461 ~~V~~l~fspdg~~L~s~s~--Dg~V~iwdl~t~~~~~~~-------~~h~~~V~~v~~sp~g~~l~sgs~-----Dg~i 526 (711)
..+..++++++|+.+++... ++.++||.+.+++. ..+ ..|...+.+++++++|+.+++.+. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 67899999999998888642 34355665545543 222 124567999999999876665543 5789
Q ss_pred EEEECCCCceeEEeecC------CCCeeEEEEcCCCCEE-EEEE---cCCcEEEEECCCCcEEEEeeCCC----------
Q psy14440 527 RLWATDSYHPLRLFVGH------YSDVDCVQFHPNSNYV-ATGS---SDRTIRLWDCVTGSHVRLLTGHK---------- 586 (711)
Q Consensus 527 ~lwd~~~~~~~~~~~~h------~~~V~~v~~sp~~~~l-atgs---~Dg~I~iwD~~~~~~v~~~~~h~---------- 586 (711)
.+||+.+++.++.+... ...+..+++++++.++ ++.+ .++.|.+||..+++..+.+.+|.
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~ 175 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLV 175 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCE
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccccee
Confidence 99999988877666532 2456899999865454 5544 57899999999888777665431
Q ss_pred -------------------CCeEEEEEecCCCEEEEEeCCC-cEEEEECC---CCe-----EEE--EeeCCCCCEEEEEE
Q psy14440 587 -------------------APVYALSFSVCGRFLASAGGDG-NVHMWDLS---NGH-----LLT--LLTGHTDVVRALCF 636 (711)
Q Consensus 587 -------------------~~I~~la~spdg~~Lasgs~Dg-~I~iwDl~---sg~-----~i~--~l~~h~~~V~sl~f 636 (711)
..++.|+|+++|++|+++..++ .|..++.. .+. ... ...++.+....+++
T Consensus 176 ~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~ 255 (343)
T 2qe8_A 176 IDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISI 255 (343)
T ss_dssp ETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEE
T ss_pred ECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEE
Confidence 2368899999999998887766 55555431 111 000 11133345567999
Q ss_pred eCCCCEEEEEeCCCcEEEEeC
Q psy14440 637 SRDGNILASSGQDCSVKLWDF 657 (711)
Q Consensus 637 spdg~~Lasgs~Dg~V~iWdl 657 (711)
+++|+++++...++.|.+||.
T Consensus 256 d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 256 DKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp CTTCCEEEEEGGGTEEEEEET
T ss_pred CCCCCEEEEccCCCeEEEEEC
Confidence 999999999989999999997
No 224
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.24 E-value=2.1e-09 Score=125.61 Aligned_cols=262 Identities=8% Similarity=-0.019 Sum_probs=175.2
Q ss_pred CCEEEEEeCCCeEEEEeCCCCceeeecc--------------------CccccccccccCCcEEEEEecCCCeeEEEeec
Q psy14440 399 VSILAVGFSESYIKLWSLVPQKLKAMKS--------------------SDQLQDIEMECDDILVRIMDERNAETTRTLVG 458 (711)
Q Consensus 399 g~~LatG~~dg~I~vWdl~~~~~~~~~~--------------------~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~ 458 (711)
+..|++++.++.|..+|..+++..-... .-....+.+++.++.+..+|..+++.+..+..
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~ 149 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQRAWSVDT 149 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECCCCCEeeeecC
Confidence 4566666677778888876655322110 01123455667789999999999998877654
Q ss_pred c--cCCEEEEEEcC---CCCEEEEEe------CCCeEEEEECCCCeEEEEEecCC-------------------------
Q psy14440 459 H--EGPVRKLSFSP---DRSLLLSCS------QDNTIRLWSLLLWRCLVVYKGHG------------------------- 502 (711)
Q Consensus 459 h--~~~V~~l~fsp---dg~~L~s~s------~Dg~V~iwdl~t~~~~~~~~~h~------------------------- 502 (711)
. ......+..+| ++ .+++++ .+|.|+.||..+++.+..+....
T Consensus 150 ~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~ 228 (689)
T 1yiq_A 150 RADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYV 228 (689)
T ss_dssp CSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHH
T ss_pred cCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceee
Confidence 2 11111111122 44 444443 37899999999999988775210
Q ss_pred -----CCE-EEEEEcCCCCEEEEEECCCe-------------------EEEEECCCCceeEEeec--CC-------CCee
Q psy14440 503 -----HPV-WDIKFSPHGYYFASAGHDRM-------------------ARLWATDSYHPLRLFVG--HY-------SDVD 548 (711)
Q Consensus 503 -----~~V-~~v~~sp~g~~l~sgs~Dg~-------------------i~lwd~~~~~~~~~~~~--h~-------~~V~ 548 (711)
..+ ..+++++++..+++++.++. |..||.++++.+..+.. |. ..+.
T Consensus 229 ~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~ 308 (689)
T 1yiq_A 229 EQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMI 308 (689)
T ss_dssp HHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEE
T ss_pred ecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcE
Confidence 011 15778888888998887764 99999999998887764 21 1122
Q ss_pred EEEEcCCCC---EEEEEEcCCcEEEEECCCCcEEEEeeCCC-C-------------------------------------
Q psy14440 549 CVQFHPNSN---YVATGSSDRTIRLWDCVTGSHVRLLTGHK-A------------------------------------- 587 (711)
Q Consensus 549 ~v~~sp~~~---~latgs~Dg~I~iwD~~~~~~v~~~~~h~-~------------------------------------- 587 (711)
......+|+ .++.++.+|.++++|..+|+.+....-.. .
T Consensus 309 l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg 388 (689)
T 1yiq_A 309 LAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGA 388 (689)
T ss_dssp EEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCS
T ss_pred EEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccc
Confidence 222223554 78899999999999999999874332110 0
Q ss_pred -CeEEEEEecCCCEEEEEeC---------------------------------------------CCcEEEEECCCCeEE
Q psy14440 588 -PVYALSFSVCGRFLASAGG---------------------------------------------DGNVHMWDLSNGHLL 621 (711)
Q Consensus 588 -~I~~la~spdg~~Lasgs~---------------------------------------------Dg~I~iwDl~sg~~i 621 (711)
.-..++++|+..+++++.. +|.|..||+.+|+.+
T Consensus 389 ~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~ 468 (689)
T 1yiq_A 389 HDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAA 468 (689)
T ss_dssp SCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEE
T ss_pred cCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeE
Confidence 0112688998888776532 378999999999998
Q ss_pred EEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCC
Q psy14440 622 TLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSD 662 (711)
Q Consensus 622 ~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~ 662 (711)
-.+..+.. +..-.++..+.++++|+.||.|+.||.++.+.
T Consensus 469 W~~~~~~~-~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~ 508 (689)
T 1yiq_A 469 WEVPYVTI-FNGGTLSTAGNLVFEGSADGRVIAYAADTGEK 508 (689)
T ss_dssp EEEEESSS-CCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred eEccCCCC-ccCccceECCCEEEEECCCCcEEEEECCCCcc
Confidence 88775542 33345666788999999999999999987654
No 225
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.22 E-value=3.8e-10 Score=132.12 Aligned_cols=196 Identities=14% Similarity=0.059 Sum_probs=137.2
Q ss_pred ccCCEEEEEEcCCCCEEEEE-----eCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCe--------
Q psy14440 459 HEGPVRKLSFSPDRSLLLSC-----SQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRM-------- 525 (711)
Q Consensus 459 h~~~V~~l~fspdg~~L~s~-----s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~-------- 525 (711)
|...+.+++|||||++|+-+ +.+.+|++||+.+++.+.... +......++|+ ||+.|+.++.+..
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~ 204 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELSAR 204 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTTEEEEEESSCCC-------
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCCEEEEEEecCccccccccc
Confidence 45578899999999988843 333579999999998654311 11112467899 9999999987743
Q ss_pred -----EEEEECCCCce--eEEeec---CCCCeeEEEEcCCCCEEEEEEc----CCcEEEEECCCCc-EEEEeeCCCCCeE
Q psy14440 526 -----ARLWATDSYHP--LRLFVG---HYSDVDCVQFHPNSNYVATGSS----DRTIRLWDCVTGS-HVRLLTGHKAPVY 590 (711)
Q Consensus 526 -----i~lwd~~~~~~--~~~~~~---h~~~V~~v~~sp~~~~latgs~----Dg~I~iwD~~~~~-~v~~~~~h~~~I~ 590 (711)
|++|++.+... ...+.. |...+..+.|+|+|++|+..+. ++.|++||+.++. ..+.+..+.....
T Consensus 205 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~ 284 (693)
T 3iuj_A 205 TDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADV 284 (693)
T ss_dssp CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCE
T ss_pred CCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceE
Confidence 99999987643 333332 3445788999999999876553 2489999998764 4556666666666
Q ss_pred EEEEecCCCEEEE-EeCC---CcEEEEECCCCeE--EEEeeCCCCCEEEEEEeCCCCEEEEEeCCC---cEEEEeCCC
Q psy14440 591 ALSFSVCGRFLAS-AGGD---GNVHMWDLSNGHL--LTLLTGHTDVVRALCFSRDGNILASSGQDC---SVKLWDFAK 659 (711)
Q Consensus 591 ~la~spdg~~Las-gs~D---g~I~iwDl~sg~~--i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg---~V~iWdl~~ 659 (711)
.. |+++|..|+. +..+ +.|.+||+.++.. ...+..|...+. .|+++++.|+....++ .|++||+..
T Consensus 285 ~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g 359 (693)
T 3iuj_A 285 SL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEG 359 (693)
T ss_dssp EE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTS
T ss_pred EE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCC
Confidence 65 6666665554 4333 6899999988754 345556665554 8899998887766544 688998863
No 226
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.20 E-value=3.7e-12 Score=137.65 Aligned_cols=182 Identities=16% Similarity=0.038 Sum_probs=108.3
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEeecCCCC-ee-
Q psy14440 471 DRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSD-VD- 548 (711)
Q Consensus 471 dg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~~~-V~- 548 (711)
++..+++++.||.|+.||..+++.+..+.. ..+.+..+..++..+++++.||.++.||..+++.+..+..+... +.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 577899999999999999999999988886 45555555667778888889999999999988876665433211 10
Q ss_pred EEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCC
Q psy14440 549 CVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHT 628 (711)
Q Consensus 549 ~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~ 628 (711)
+..+. .+..|++|+.|+.|+.||..+|+.+..+..+. ...++|++..|++++.||.|+.||.++|+.+..+..+.
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~ 160 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD 160 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE
T ss_pred CceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc
Confidence 01111 34577888889999999999999887776543 23456788899999999999999999998765554221
Q ss_pred CCEEEEEEeCCC---CEEEEEeCCCcEEEEeCCCCC
Q psy14440 629 DVVRALCFSRDG---NILASSGQDCSVKLWDFAKLS 661 (711)
Q Consensus 629 ~~V~sl~fspdg---~~Lasgs~Dg~V~iWdl~~~~ 661 (711)
....+++.++ ..+++++.||.|+.||..+..
T Consensus 161 --~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~ 194 (369)
T 2hz6_A 161 --YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGD 194 (369)
T ss_dssp --ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCC
T ss_pred --ccCccccCCccccceEEEECCCCEEEEEECCCCc
Confidence 1223333332 557778899999999987643
No 227
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.20 E-value=3.9e-12 Score=137.48 Aligned_cols=205 Identities=15% Similarity=0.043 Sum_probs=114.7
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEE
Q psy14440 398 DVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLS 477 (711)
Q Consensus 398 dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s 477 (711)
++..|++|+.||.|..||..++++ ...+.. +.+.+..+..++..+++
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~-------------------------------~W~~~~--~~~~s~p~~~~g~~~v~ 54 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSI-------------------------------KWTLKE--DPVLQVPTHVEEPAFLP 54 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCE-------------------------------EEEEEC--CCSCCCC-----CCEEE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCE-------------------------------EEEecC--CCceecceEcCCCEEEE
Confidence 567888899999999998765443 222222 23344445567778888
Q ss_pred EeCCCeEEEEECCCCeEEEEEecCCCC-EE-EEEEcCCCCEEEEEECCCeEEEEECCCCceeEEeecCCCCeeEEEEcCC
Q psy14440 478 CSQDNTIRLWSLLLWRCLVVYKGHGHP-VW-DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPN 555 (711)
Q Consensus 478 ~s~Dg~V~iwdl~t~~~~~~~~~h~~~-V~-~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~ 555 (711)
++.||.|+.||..+++.+..+..+... +. +..+. .+..+++++.|+.++.||.++++.+..+..+. .+.++|+
T Consensus 55 ~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~ 129 (369)
T 2hz6_A 55 DPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPS 129 (369)
T ss_dssp CTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC-----------------------
T ss_pred eCCCCEEEEEECCCCceeeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----ccccccc
Confidence 889999999999988877666543211 10 00111 34577888889999999999999887776543 2345668
Q ss_pred CCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCC---CEEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEE
Q psy14440 556 SNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCG---RFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVR 632 (711)
Q Consensus 556 ~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg---~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~ 632 (711)
+..+++++.|+.|+.||..+|+.+..+..+. ....+++.++ ..+++++.||.|+.||..+|+.+..+......+.
T Consensus 130 ~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~ 207 (369)
T 2hz6_A 130 TSLLYLGRTEYTITMYDTKTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVA 207 (369)
T ss_dssp ---EEEEEEEEEEECCCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEE
T ss_pred CCEEEEEecCCEEEEEECCCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEE
Confidence 8899999999999999999998765554221 1223333332 5677788999999999999999887764333333
Q ss_pred EEEEeCCCCE
Q psy14440 633 ALCFSRDGNI 642 (711)
Q Consensus 633 sl~fspdg~~ 642 (711)
...++.+|..
T Consensus 208 ~~~~~~dg~~ 217 (369)
T 2hz6_A 208 FYVWQREGLR 217 (369)
T ss_dssp EEECTTSSCE
T ss_pred EEEecCCceE
Confidence 3445556643
No 228
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.20 E-value=3.5e-09 Score=123.51 Aligned_cols=261 Identities=12% Similarity=0.067 Sum_probs=182.4
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceeeeccCc---------------cccccccccC------CcEEEEEecCCCeeEEEe
Q psy14440 398 DVSILAVGFSESYIKLWSLVPQKLKAMKSSD---------------QLQDIEMECD------DILVRIMDERNAETTRTL 456 (711)
Q Consensus 398 dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~---------------~~~~l~~~~~------d~~i~i~d~~~~~~~~~l 456 (711)
++..|++++.|+.|..+|..++++.-..... ....+.++.. ++.++.+|..+++.+..+
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 4567888888999999999776643211110 0122333332 689999999999988776
Q ss_pred ecccCC--------------------------------EEEEEEcCCCCEEEEEeCCC-------------------eEE
Q psy14440 457 VGHEGP--------------------------------VRKLSFSPDRSLLLSCSQDN-------------------TIR 485 (711)
Q Consensus 457 ~~h~~~--------------------------------V~~l~fspdg~~L~s~s~Dg-------------------~V~ 485 (711)
...... ...+++++++..++.++.++ +|.
T Consensus 207 ~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~ 286 (677)
T 1kb0_A 207 FSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIV 286 (677)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEE
Confidence 542211 13578889999998887664 599
Q ss_pred EEECCCCeEEEEEecCCC---------CEEEEEEcCCC---CEEEEEECCCeEEEEECCCCceeEEeecCCC--------
Q psy14440 486 LWSLLLWRCLVVYKGHGH---------PVWDIKFSPHG---YYFASAGHDRMARLWATDSYHPLRLFVGHYS-------- 545 (711)
Q Consensus 486 iwdl~t~~~~~~~~~h~~---------~V~~v~~sp~g---~~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~~-------- 545 (711)
.+|..+++.+..++.... ....+....+| ..+++++.+|.++++|.++++.+..+.....
T Consensus 287 AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~ 366 (677)
T 1kb0_A 287 ALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDK 366 (677)
T ss_dssp EECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECT
T ss_pred EEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCC
Confidence 999999999988874221 12222333366 6899999999999999999998765542110
Q ss_pred ---Ce------------------------eEEEEcCCCCEEEEEEcC---------------------------------
Q psy14440 546 ---DV------------------------DCVQFHPNSNYVATGSSD--------------------------------- 565 (711)
Q Consensus 546 ---~V------------------------~~v~~sp~~~~latgs~D--------------------------------- 565 (711)
.+ ..++|+|++.++++.+.+
T Consensus 367 ~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~ 446 (677)
T 1kb0_A 367 HGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFF 446 (677)
T ss_dssp TSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEE
T ss_pred CCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccccccc
Confidence 00 156889988888776532
Q ss_pred ----------CcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCC-CCEEEE
Q psy14440 566 ----------RTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHT-DVVRAL 634 (711)
Q Consensus 566 ----------g~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~-~~V~sl 634 (711)
|.|..||+.+|+.+..+. +...+....++.+|..+++++.||.+++||.++|+.+..+.... ....-+
T Consensus 447 ~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ 525 (677)
T 1kb0_A 447 NAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPS 525 (677)
T ss_dssp CSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCE
T ss_pred ccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCE
Confidence 789999999999887775 33444555677788899999999999999999999999887443 223345
Q ss_pred EEeCCCCEEEEE-eC----------------CCcEEEEeCCC
Q psy14440 635 CFSRDGNILASS-GQ----------------DCSVKLWDFAK 659 (711)
Q Consensus 635 ~fspdg~~Lasg-s~----------------Dg~V~iWdl~~ 659 (711)
.|..+|+.+++. +. .+.+.+|.+..
T Consensus 526 ~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~~ 567 (677)
T 1kb0_A 526 TYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVGG 567 (677)
T ss_dssp EEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEETC
T ss_pred EEEeCCEEEEEEeccCCccccccccccccCCCCeEEEEeccc
Confidence 677788744432 22 36788888874
No 229
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.19 E-value=1.7e-09 Score=126.04 Aligned_cols=263 Identities=8% Similarity=-0.052 Sum_probs=178.3
Q ss_pred CCEEEEEeCCCeEEEEeCCCCceeeecc-C-------------------ccccccccccCCcEEEEEecCCCeeEEEeec
Q psy14440 399 VSILAVGFSESYIKLWSLVPQKLKAMKS-S-------------------DQLQDIEMECDDILVRIMDERNAETTRTLVG 458 (711)
Q Consensus 399 g~~LatG~~dg~I~vWdl~~~~~~~~~~-~-------------------~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~ 458 (711)
+..|++++.++.|.-+|..+++..-... . -....+.+++.++.+..+|..+++.+..+..
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~ 156 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAATGKEVWHQNT 156 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEET
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCCEEEEEECCCCCEEeeecC
Confidence 3455555566677777766554321110 0 0223455667788999999999999888775
Q ss_pred c-c----CCEEEEEEcCCCCEEEEEeC------CCeEEEEECCCCeEEEEEecCCCC-----------------------
Q psy14440 459 H-E----GPVRKLSFSPDRSLLLSCSQ------DNTIRLWSLLLWRCLVVYKGHGHP----------------------- 504 (711)
Q Consensus 459 h-~----~~V~~l~fspdg~~L~s~s~------Dg~V~iwdl~t~~~~~~~~~h~~~----------------------- 504 (711)
+ . ..+.+.-.. .+..+++++. +|.|+.||..+++.+..+......
T Consensus 157 ~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~ 235 (677)
T 1kb0_A 157 FEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKW 235 (677)
T ss_dssp TTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCH
T ss_pred CcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCce
Confidence 5 2 112111111 2345555543 799999999999999887643211
Q ss_pred ---------EEEEEEcCCCCEEEEEECCC-------------------eEEEEECCCCceeEEeec--CC-------CCe
Q psy14440 505 ---------VWDIKFSPHGYYFASAGHDR-------------------MARLWATDSYHPLRLFVG--HY-------SDV 547 (711)
Q Consensus 505 ---------V~~v~~sp~g~~l~sgs~Dg-------------------~i~lwd~~~~~~~~~~~~--h~-------~~V 547 (711)
...+++++++..++.++.++ .|..+|.++++.+..+.. |. ...
T Consensus 236 ~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p 315 (677)
T 1kb0_A 236 WEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPM 315 (677)
T ss_dssp HHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCC
T ss_pred eEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCc
Confidence 12467888888888887664 599999999998877654 21 122
Q ss_pred eEEEEcCCC---CEEEEEEcCCcEEEEECCCCcEEEEeeCCC----------C-Ce------------------------
Q psy14440 548 DCVQFHPNS---NYVATGSSDRTIRLWDCVTGSHVRLLTGHK----------A-PV------------------------ 589 (711)
Q Consensus 548 ~~v~~sp~~---~~latgs~Dg~I~iwD~~~~~~v~~~~~h~----------~-~I------------------------ 589 (711)
..+....+| ..+++++.+|.|+++|..+|+.+..+.... + .+
T Consensus 316 ~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w 395 (677)
T 1kb0_A 316 ILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNW 395 (677)
T ss_dssp EEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCS
T ss_pred EEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCC
Confidence 233333467 689999999999999999999887654211 0 01
Q ss_pred EEEEEecCCCEEEEEeC-------------------------------------------CCcEEEEECCCCeEEEEeeC
Q psy14440 590 YALSFSVCGRFLASAGG-------------------------------------------DGNVHMWDLSNGHLLTLLTG 626 (711)
Q Consensus 590 ~~la~spdg~~Lasgs~-------------------------------------------Dg~I~iwDl~sg~~i~~l~~ 626 (711)
..++++|++.++++... .|.|..||+.+|+.+..+..
T Consensus 396 ~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~ 475 (677)
T 1kb0_A 396 HPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEH 475 (677)
T ss_dssp SCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEE
T ss_pred CCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCC
Confidence 14688999888877543 27899999999999887763
Q ss_pred CCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCCc
Q psy14440 627 HTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDE 663 (711)
Q Consensus 627 h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~ 663 (711)
...+.+..++.++.+++.++.||.|++||..+....
T Consensus 476 -~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~l 511 (677)
T 1kb0_A 476 -VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKL 511 (677)
T ss_dssp -SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred -CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCcee
Confidence 334455566778888999999999999999876543
No 230
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.18 E-value=5.8e-09 Score=121.89 Aligned_cols=247 Identities=12% Similarity=0.073 Sum_probs=169.8
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceeeec-cC------------c--ccccccccc------CCcEEEEEecCCCeeEEEe
Q psy14440 398 DVSILAVGFSESYIKLWSLVPQKLKAMK-SS------------D--QLQDIEMEC------DDILVRIMDERNAETTRTL 456 (711)
Q Consensus 398 dg~~LatG~~dg~I~vWdl~~~~~~~~~-~~------------~--~~~~l~~~~------~d~~i~i~d~~~~~~~~~l 456 (711)
++..|++++.|+.|..+|..++++.-.. .. . ....+.++. .++.++.+|..+++.+..+
T Consensus 120 ~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 120 WKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 3567888889999999999877653211 10 0 011222322 2688999999999988776
Q ss_pred ecc-------------------------------cCCEEEEEEcCCCCEEEEEeCCCe-------------------EEE
Q psy14440 457 VGH-------------------------------EGPVRKLSFSPDRSLLLSCSQDNT-------------------IRL 486 (711)
Q Consensus 457 ~~h-------------------------------~~~V~~l~fspdg~~L~s~s~Dg~-------------------V~i 486 (711)
... ......+++++++..++.++.++. |..
T Consensus 200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A 279 (689)
T 1yiq_A 200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA 279 (689)
T ss_dssp ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 521 011125788898889999988764 999
Q ss_pred EECCCCeEEEEEecCCC---------CEEEEEEcCCCC---EEEEEECCCeEEEEECCCCceeEEeecCC----------
Q psy14440 487 WSLLLWRCLVVYKGHGH---------PVWDIKFSPHGY---YFASAGHDRMARLWATDSYHPLRLFVGHY---------- 544 (711)
Q Consensus 487 wdl~t~~~~~~~~~h~~---------~V~~v~~sp~g~---~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~---------- 544 (711)
||..+++.+..++.... ++.......+|+ .++.++.+|.++++|.++++.+.......
T Consensus 280 lD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~ 359 (689)
T 1yiq_A 280 VNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMK 359 (689)
T ss_dssp EETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETT
T ss_pred EEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCcc
Confidence 99999999988875211 122222222554 78899999999999999998874322100
Q ss_pred -----------------------------CCeeEEEEcCCCCEEEEEEc-------------------------------
Q psy14440 545 -----------------------------SDVDCVQFHPNSNYVATGSS------------------------------- 564 (711)
Q Consensus 545 -----------------------------~~V~~v~~sp~~~~latgs~------------------------------- 564 (711)
..-..++|+|+..++++++.
T Consensus 360 ~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 439 (689)
T 1yiq_A 360 TGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMM 439 (689)
T ss_dssp TTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCC
T ss_pred CCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcccccc
Confidence 00123788888888777632
Q ss_pred --------------CCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCC
Q psy14440 565 --------------DRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDV 630 (711)
Q Consensus 565 --------------Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~ 630 (711)
+|+|+.||+.+|+.+..+..+. .+..-.++..|.++++|+.||.|+.||.++|+.+..++...+.
T Consensus 440 p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~ 518 (689)
T 1yiq_A 440 PEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGV 518 (689)
T ss_dssp CSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC
T ss_pred CcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCc
Confidence 3779999999999888776443 2333456667889999999999999999999999888754332
Q ss_pred -EEEEEEeCCCCEEEE
Q psy14440 631 -VRALCFSRDGNILAS 645 (711)
Q Consensus 631 -V~sl~fspdg~~Las 645 (711)
..-+.|..+|+..++
T Consensus 519 ~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 519 MAAPVTYSVDGEQYVT 534 (689)
T ss_dssp CSCCEEEEETTEEEEE
T ss_pred ccCceEEEECCEEEEE
Confidence 244677788874433
No 231
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.16 E-value=2.2e-08 Score=107.49 Aligned_cols=249 Identities=7% Similarity=-0.017 Sum_probs=168.2
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceeee-ccC--------ccccccccccCCcEEEEEecCCCeeEEEeecccCCE-----
Q psy14440 398 DVSILAVGFSESYIKLWSLVPQKLKAM-KSS--------DQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPV----- 463 (711)
Q Consensus 398 dg~~LatG~~dg~I~vWdl~~~~~~~~-~~~--------~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V----- 463 (711)
++..+++++.++.|..+|..++++.-. ... .....+.++..++.+..+|..+++............
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~ 181 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGE 181 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCC
Confidence 455777888899999999987664321 111 112345566778899999999998877765432211
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCC-------EEEEEEcC--CCCEEEEEECCCeEEEEECCCC
Q psy14440 464 RKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHP-------VWDIKFSP--HGYYFASAGHDRMARLWATDSY 534 (711)
Q Consensus 464 ~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~-------V~~v~~sp--~g~~l~sgs~Dg~i~lwd~~~~ 534 (711)
...... +..++.++.++.|..+|..+++.+..+...... +..+...| .+..+++++.++.+..+|..++
T Consensus 182 ~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG 259 (376)
T 3q7m_A 182 SAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSG 259 (376)
T ss_dssp CCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTC
T ss_pred CCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCC
Confidence 112222 457888888999999999999988776532110 00011111 2457888888999999999999
Q ss_pred ceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeC-CCCCeEEEEEecCCCEEEEEeCCCcEEEE
Q psy14440 535 HPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTG-HKAPVYALSFSVCGRFLASAGGDGNVHMW 613 (711)
Q Consensus 535 ~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~-h~~~I~~la~spdg~~Lasgs~Dg~I~iw 613 (711)
+.+.... .....++.. ++..+++++.++.|..+|..+|+.+..... ....+...... +..|++++.+|.|.++
T Consensus 260 ~~~w~~~--~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~--~~~l~v~~~~g~l~~~ 333 (376)
T 3q7m_A 260 QIMWKRE--LGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY--NGNLVVGDSEGYLHWI 333 (376)
T ss_dssp CEEEEEC--CCCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE--TTEEEEECTTSEEEEE
T ss_pred cEEeecc--CCCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEE--CCEEEEEeCCCeEEEE
Confidence 8776654 233444444 367888888999999999999998776652 22223333332 5678889999999999
Q ss_pred ECCCCeEEEEeeCCCCCEEE-EEEeCCCCEEEEEeCCCcEEEEe
Q psy14440 614 DLSNGHLLTLLTGHTDVVRA-LCFSRDGNILASSGQDCSVKLWD 656 (711)
Q Consensus 614 Dl~sg~~i~~l~~h~~~V~s-l~fspdg~~Lasgs~Dg~V~iWd 656 (711)
|..+|+.+.........+.+ .... +..|+.++.+|.|..||
T Consensus 334 d~~tG~~~~~~~~~~~~~~~~~~~~--~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 334 NVEDGRFVAQQKVDSSGFQTEPVAA--DGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp ETTTCCEEEEEECCTTCBCSCCEEE--TTEEEEEBTTSCEEEEE
T ss_pred ECCCCcEEEEEecCCCcceeCCEEE--CCEEEEEeCCCEEEEEe
Confidence 99999998887754333322 2222 55788889999999987
No 232
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.14 E-value=1.6e-09 Score=113.47 Aligned_cols=257 Identities=9% Similarity=-0.029 Sum_probs=176.7
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCc--------cccccccccCCcEEEEEecCCCeeEEEeecc
Q psy14440 388 QQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSD--------QLQDIEMECDDILVRIMDERNAETTRTLVGH 459 (711)
Q Consensus 388 ~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~--------~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h 459 (711)
..+.++....+|.+.+ |+.+ |..+|..+..+....... ....+.+++.++.+..+|.. ++.......+
T Consensus 60 ~~~~~~~~~~~g~l~v-~t~~--l~~~d~~g~~~~~~~~~~~~~~~~~~~~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~ 135 (330)
T 3hxj_A 60 IIECRPSIGKDGTIYF-GSDK--VYAINPDGTEKWRFDTKKAIVSDFTIFEDILYVTSMDGHLYAINTD-GTEKWRFKTK 135 (330)
T ss_dssp EEEECCEETTTTEECC-SSCE--EEEECCCGGGGGGSCC-----CCEEEETTEEEEECTTSEEEEECTT-SCEEEEEECS
T ss_pred CcccceEEecCCcEEE-ecCc--EEEECCCCcEEEEEECCCCcccCceEECCEEEEEecCCEEEEEcCC-CCEEEEEcCC
Confidence 3456777777776444 4444 888886443322211110 12334556667888889987 6666666656
Q ss_pred cCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEE
Q psy14440 460 EGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRL 539 (711)
Q Consensus 460 ~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~ 539 (711)
...+.++....++. |+.++.++.|..||.. ++.+..+......+.++....++..++ ++ +.+..|| .+++.+..
T Consensus 136 ~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~ 209 (330)
T 3hxj_A 136 KAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWN 209 (330)
T ss_dssp SCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEE
T ss_pred CceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEE
Confidence 66667777776776 6667788999999998 887777776666677788877776544 44 7899999 67776666
Q ss_pred eecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCe
Q psy14440 540 FVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGH 619 (711)
Q Consensus 540 ~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~ 619 (711)
+......+.++...+++. |.+++.++.|..+| .+++.+..+......+.++.+..+| .|+.++.+|.|..+|. +++
T Consensus 210 ~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~-~~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~ 285 (330)
T 3hxj_A 210 FYAGYWTVTRPAISEDGT-IYVTSLDGHLYAIN-PDGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGT 285 (330)
T ss_dssp ECCSSCCCSCCEECTTSC-EEEEETTTEEEEEC-TTSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSC
T ss_pred EccCCcceeceEECCCCe-EEEEcCCCeEEEEC-CCCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CCc
Confidence 665666788888887764 55677788888888 4666666666554445556666556 4667888889999995 788
Q ss_pred EEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 620 LLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 620 ~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
.+..+......+.++....+|+ |..|+.+|.+++.....
T Consensus 286 ~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 286 EKWNFETGSWIIATPVIDENGT-IYFGTRNGKFYALFNLE 324 (330)
T ss_dssp EEEEEECSSCCCSCCEECTTCC-EEEECTTSCEEEEEC--
T ss_pred EEEEEEcCCccccceEEcCCCE-EEEEcCCCeEEEEeccc
Confidence 7777765566677787777776 45588899999987654
No 233
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.14 E-value=1.2e-09 Score=117.59 Aligned_cols=214 Identities=10% Similarity=-0.047 Sum_probs=141.3
Q ss_pred EEEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEe----------CCCeEEEEECCCCeEEEEEecC-------CC
Q psy14440 441 LVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCS----------QDNTIRLWSLLLWRCLVVYKGH-------GH 503 (711)
Q Consensus 441 ~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s----------~Dg~V~iwdl~t~~~~~~~~~h-------~~ 503 (711)
.+.++|..+++.+.++.....+ .+.++||+++++++. .+++|.+||+.+++.+..+... ..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 5666677777888777655556 799999999999886 3688999999999999988643 12
Q ss_pred CEEEEEEcCCCCEEEEEEC--CCeEEE--EECCCCceeEEeecC------------------CCCeeEEEE---------
Q psy14440 504 PVWDIKFSPHGYYFASAGH--DRMARL--WATDSYHPLRLFVGH------------------YSDVDCVQF--------- 552 (711)
Q Consensus 504 ~V~~v~~sp~g~~l~sgs~--Dg~i~l--wd~~~~~~~~~~~~h------------------~~~V~~v~~--------- 552 (711)
....+.++|+|++++++.. +..+.+ +|..+ ++.+... .+.+..+..
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~ 201 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGI 201 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEE
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCe
Confidence 3457999999999998874 467888 88865 2222110 000000100
Q ss_pred -----------------cCCCCEEEEEEcCCcEEEEECCCCc--EEEEeeCC----------CCCeEEEEEecCCCEEEE
Q psy14440 553 -----------------HPNSNYVATGSSDRTIRLWDCVTGS--HVRLLTGH----------KAPVYALSFSVCGRFLAS 603 (711)
Q Consensus 553 -----------------sp~~~~latgs~Dg~I~iwD~~~~~--~v~~~~~h----------~~~I~~la~spdg~~Las 603 (711)
.+++..++..+. +.|.+.|+.++. .+..+.-. ......+++++||+.+++
T Consensus 202 v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV 280 (368)
T 1mda_H 202 VGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMI 280 (368)
T ss_dssp CCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEE
T ss_pred EEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEE
Confidence 222233333333 566666664332 12211100 011122689999998887
Q ss_pred EeC---------CCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCC-EEEEEe-CCCcEEEEeCCCCC
Q psy14440 604 AGG---------DGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGN-ILASSG-QDCSVKLWDFAKLS 661 (711)
Q Consensus 604 gs~---------Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~-~Lasgs-~Dg~V~iWdl~~~~ 661 (711)
+.. ++.+.++|+.+++.+..+.... ..++++|++||+ .+++.. .+++|.|+|+.+.+
T Consensus 281 ~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~k 348 (368)
T 1mda_H 281 LTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp EEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCE
T ss_pred EeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCc
Confidence 643 2356699999999998886443 578999999998 566666 59999999998643
No 234
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.13 E-value=2.8e-08 Score=106.73 Aligned_cols=251 Identities=7% Similarity=-0.056 Sum_probs=167.1
Q ss_pred CCEEEEEeCCCeEEEEeCCCCceee-eccC------------------ccccccccccCCcEEEEEecCCCeeEEEeecc
Q psy14440 399 VSILAVGFSESYIKLWSLVPQKLKA-MKSS------------------DQLQDIEMECDDILVRIMDERNAETTRTLVGH 459 (711)
Q Consensus 399 g~~LatG~~dg~I~vWdl~~~~~~~-~~~~------------------~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h 459 (711)
+..|.+++.++.|..||..+++..- .... .....+.+++.++.+..+|..+++........
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~ 132 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVA 132 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECS
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCC
Confidence 4566677777888888886655431 1110 11233555667788999999989887766544
Q ss_pred cCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCE-----EEEEEcCCCCEEEEEECCCeEEEEECCCC
Q psy14440 460 EGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPV-----WDIKFSPHGYYFASAGHDRMARLWATDSY 534 (711)
Q Consensus 460 ~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V-----~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~ 534 (711)
.......... +..+++++.++.|..+|..+++.+..+....... ...... +..+++++.++.+..+|..++
T Consensus 133 ~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG 208 (376)
T 3q7m_A 133 GEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQG 208 (376)
T ss_dssp SCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTC
T ss_pred CceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCC
Confidence 3221122222 4578888899999999999999888776432211 111222 447888888999999999999
Q ss_pred ceeEEeecCCCC----------ee-EEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEE
Q psy14440 535 HPLRLFVGHYSD----------VD-CVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLAS 603 (711)
Q Consensus 535 ~~~~~~~~h~~~----------V~-~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Las 603 (711)
+.+......... +. .... .+..+++++.++.|..+|..+|+.+..... ....++.. ++..|++
T Consensus 209 ~~~w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~--~~~~l~~ 282 (376)
T 3q7m_A 209 QMIWQQRISQATGSTEIDRLSDVDTTPVV--VNGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV--DGNRIYL 282 (376)
T ss_dssp CEEEEEECCC-----------CCCCCCEE--ETTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE--ETTEEEE
T ss_pred cEEEEEecccCCCCcccccccccCCCcEE--ECCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceE--ECCEEEE
Confidence 887665432110 11 1111 356788888899999999999998766542 33444544 3667888
Q ss_pred EeCCCcEEEEECCCCeEEEEeeCC-CCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCC
Q psy14440 604 AGGDGNVHMWDLSNGHLLTLLTGH-TDVVRALCFSRDGNILASSGQDCSVKLWDFAKLS 661 (711)
Q Consensus 604 gs~Dg~I~iwDl~sg~~i~~l~~h-~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~ 661 (711)
++.+|.|..+|..+|+.+...... ...+.+.... +..|+.++.+|.|.+||..+..
T Consensus 283 ~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~--~~~l~v~~~~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 283 VDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY--NGNLVVGDSEGYLHWINVEDGR 339 (376)
T ss_dssp EETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE--TTEEEEECTTSEEEEEETTTCC
T ss_pred EcCCCeEEEEECCCCcEEEeecccCCCcccCCEEE--CCEEEEEeCCCeEEEEECCCCc
Confidence 888999999999999988776522 2223333333 5678889999999999987654
No 235
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.07 E-value=4.7e-09 Score=109.92 Aligned_cols=248 Identities=10% Similarity=0.023 Sum_probs=159.9
Q ss_pred EEECCCCCEEEEEeCCCeEEEEeCCCCceeeecc-C---------ccccccccccCCcEEEEEecCCCeeEEEeecccCC
Q psy14440 393 AEISEDVSILAVGFSESYIKLWSLVPQKLKAMKS-S---------DQLQDIEMECDDILVRIMDERNAETTRTLVGHEGP 462 (711)
Q Consensus 393 l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~-~---------~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~ 462 (711)
..+..++. |.+|+.++.|..|| .+++...... . .....+.++..+ +..+|. +++....+..+...
T Consensus 25 ~~~d~~g~-l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~--l~~~d~-~g~~~~~~~~~~~~ 99 (330)
T 3hxj_A 25 PILAKNGT-IYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGTIYFGSDK--VYAINP-DGTEKWRFDTKKAI 99 (330)
T ss_dssp CEECTTSC-EECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTEECCSSCE--EEEECC-CGGGGGGSCC----
T ss_pred ceEccCCe-EEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCcEEEecCc--EEEECC-CCcEEEEEECCCCc
Confidence 34444554 44555667777777 4443221100 0 111223333333 777775 44443333222222
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEeec
Q psy14440 463 VRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVG 542 (711)
Q Consensus 463 V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~ 542 (711)
.....+. +..|+.++.++.|..+|.. ++....+..+...+.++...+++. +..++.++.+..||.. ++.+..+..
T Consensus 100 ~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~ 174 (330)
T 3hxj_A 100 VSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKT 174 (330)
T ss_dssp -CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEEC
T ss_pred ccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEec
Confidence 2233333 5568888889999999998 777777766666666777777775 6667788999999998 777766666
Q ss_pred CCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEE
Q psy14440 543 HYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLT 622 (711)
Q Consensus 543 h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~ 622 (711)
....+.++.+..++..++ ++ +.|..|| .+++.+..+......+.+++.+++|. |..++.++.|..+| .+++.+.
T Consensus 175 ~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~-~~g~~~~ 248 (330)
T 3hxj_A 175 NDAITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAIN-PDGTEKW 248 (330)
T ss_dssp SSCCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEEC-TTSCEEE
T ss_pred CCCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEEC-CCCCEeE
Confidence 666777888877776544 44 8899999 78877777766667788888888875 45566778888888 4677766
Q ss_pred EeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeC
Q psy14440 623 LLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDF 657 (711)
Q Consensus 623 ~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl 657 (711)
.+......+.++.+..+|+ |..++.+|.|..+|.
T Consensus 249 ~~~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 249 RFKTGKRIESSPVIGNTDT-IYFGSYDGHLYAINP 282 (330)
T ss_dssp EEECSSCCCSCCEECTTSC-EEEECTTCEEEEECT
T ss_pred EeeCCCCccccceEcCCCe-EEEecCCCCEEEECC
Confidence 6665544445566665664 566778888999984
No 236
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.05 E-value=4.6e-08 Score=106.95 Aligned_cols=185 Identities=11% Similarity=0.003 Sum_probs=117.3
Q ss_pred CcEEEEEecCCCeeEEEeecc-------cCCEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCeEEEEEecCCC-CE---
Q psy14440 439 DILVRIMDERNAETTRTLVGH-------EGPVRKLSFSPDRSLLLSCSQ--DNTIRLWSLLLWRCLVVYKGHGH-PV--- 505 (711)
Q Consensus 439 d~~i~i~d~~~~~~~~~l~~h-------~~~V~~l~fspdg~~L~s~s~--Dg~V~iwdl~t~~~~~~~~~h~~-~V--- 505 (711)
++.|.++|..+.+.+..+.-. ...-..+.|++||++|+++.. +++|.+.|+.+++.+..+..... .+
T Consensus 148 ~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~ 227 (426)
T 3c75_H 148 TDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPA 227 (426)
T ss_dssp EEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEE
T ss_pred CCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccC
Confidence 456777777777666655321 122356788888888887764 46788888888877766653111 00
Q ss_pred ---EEEEE-------------------------------------cCCCCEEEEEECCCeEEEEECCCCcee--EEeec-
Q psy14440 506 ---WDIKF-------------------------------------SPHGYYFASAGHDRMARLWATDSYHPL--RLFVG- 542 (711)
Q Consensus 506 ---~~v~~-------------------------------------sp~g~~l~sgs~Dg~i~lwd~~~~~~~--~~~~~- 542 (711)
.-+.+ .+++..++..+..+.+.+.|....... ..+.-
T Consensus 228 g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~ 307 (426)
T 3c75_H 228 SPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEAL 307 (426)
T ss_dssp ETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESS
T ss_pred CCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeec
Confidence 00222 333333333334444555554332211 00000
Q ss_pred ---------CCCCeeEEEEcCCCCEEEEEEc----------CCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCC-EEE
Q psy14440 543 ---------HYSDVDCVQFHPNSNYVATGSS----------DRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGR-FLA 602 (711)
Q Consensus 543 ---------h~~~V~~v~~sp~~~~latgs~----------Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~-~La 602 (711)
.......++++++++++++... +++|.++|+.+++.+..+... .....++|++||+ +++
T Consensus 308 ~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~ly 386 (426)
T 3c75_H 308 TEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLY 386 (426)
T ss_dssp CTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEE
T ss_pred cccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEE
Confidence 0011223789999887777643 357999999999999888632 2478999999999 888
Q ss_pred EEe-CCCcEEEEECCCCeEEEEe
Q psy14440 603 SAG-GDGNVHMWDLSNGHLLTLL 624 (711)
Q Consensus 603 sgs-~Dg~I~iwDl~sg~~i~~l 624 (711)
++. .++.|.++|+.+++.++++
T Consensus 387 v~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 387 ALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEETTTTEEEEEETTTCCEEEEE
T ss_pred EEcCCCCeEEEEECCCCCEEEEe
Confidence 888 5899999999999999887
No 237
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.04 E-value=6.1e-07 Score=91.43 Aligned_cols=196 Identities=14% Similarity=0.029 Sum_probs=129.3
Q ss_pred CCEEEEEEcCCCCEEEEEe-CCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCE-EEEEECCCeEEEEECCCCceeE
Q psy14440 461 GPVRKLSFSPDRSLLLSCS-QDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYY-FASAGHDRMARLWATDSYHPLR 538 (711)
Q Consensus 461 ~~V~~l~fspdg~~L~s~s-~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~-l~sgs~Dg~i~lwd~~~~~~~~ 538 (711)
..+.+++|++++..|+.+. .++.|.++++........+.........+++++++.. +++....+.|.+++.+......
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 115 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV 115 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE
Confidence 3578999999766665554 5789999999766544444333356789999986554 4455567899999987544333
Q ss_pred EeecCCCCeeEEEEcCCCCEEEEEEc---CCcEEEEECCCCcEEEEe-eCCCCCeEEEEEecCCCEEEEEe-CCCcEEEE
Q psy14440 539 LFVGHYSDVDCVQFHPNSNYVATGSS---DRTIRLWDCVTGSHVRLL-TGHKAPVYALSFSVCGRFLASAG-GDGNVHMW 613 (711)
Q Consensus 539 ~~~~h~~~V~~v~~sp~~~~latgs~---Dg~I~iwD~~~~~~v~~~-~~h~~~I~~la~spdg~~Lasgs-~Dg~I~iw 613 (711)
...........+++++++.+|+.+.. .+.|..+++... ....+ ...-.....++++++++.|+.+. ..+.|.++
T Consensus 116 ~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~ 194 (267)
T 1npe_A 116 LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECL 194 (267)
T ss_dssp EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEE
Confidence 33323356789999997666665554 368888887543 33333 23335678999999877666554 56799999
Q ss_pred ECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 614 DLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 614 Dl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
|+..+.....+.+ ......++.. ++.++++....+.|.++|..+
T Consensus 195 ~~~g~~~~~~~~~-~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~ 238 (267)
T 1npe_A 195 NPAQPGRRKVLEG-LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAI 238 (267)
T ss_dssp ETTEEEEEEEEEC-CCSEEEEEEE-TTEEEEEETTTTEEEEEETTT
T ss_pred ecCCCceEEEecC-CCCceEEEEe-CCEEEEEECCCCeEEEEeCCC
Confidence 9976544444433 3345677765 444555444568899998764
No 238
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.03 E-value=4.5e-08 Score=106.27 Aligned_cols=184 Identities=15% Similarity=0.148 Sum_probs=132.3
Q ss_pred EEEEEEcCCCCEEEEEeCC------CeEEEEECCCCeEEEEEecCC---CCEEEEEEcCCCCEEEEEE------------
Q psy14440 463 VRKLSFSPDRSLLLSCSQD------NTIRLWSLLLWRCLVVYKGHG---HPVWDIKFSPHGYYFASAG------------ 521 (711)
Q Consensus 463 V~~l~fspdg~~L~s~s~D------g~V~iwdl~t~~~~~~~~~h~---~~V~~v~~sp~g~~l~sgs------------ 521 (711)
-..+.++|+| .++++..+ |.|.++|..+++.+..+.... ..-.++.|+|+++.+++..
T Consensus 140 Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~ 218 (462)
T 2ece_A 140 LHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLK 218 (462)
T ss_dssp EEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCC
T ss_pred ccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccc
Confidence 3567778999 77776655 789999999999999886322 2244688999999888885
Q ss_pred -------CCCeEEEEECCCCceeEEeecC-C-CCeeEEEE--cCCCCEEEEEEc------CCcEEEEECCCCcE--EEEe
Q psy14440 522 -------HDRMARLWATDSYHPLRLFVGH-Y-SDVDCVQF--HPNSNYVATGSS------DRTIRLWDCVTGSH--VRLL 582 (711)
Q Consensus 522 -------~Dg~i~lwd~~~~~~~~~~~~h-~-~~V~~v~~--sp~~~~latgs~------Dg~I~iwD~~~~~~--v~~~ 582 (711)
.+.+|.+||+.+++.+..+... . .....+.| +|+++++++++. +++|.+|....|+. ...+
T Consensus 219 ~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vI 298 (462)
T 2ece_A 219 LEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVI 298 (462)
T ss_dssp TTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEE
T ss_pred hhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEE
Confidence 3789999999998777776542 1 23445656 999999888774 56888776655431 1111
Q ss_pred --eCC----------------CCCeEEEEEecCCCEEEEEeC-CCcEEEEECC---CCeEEEEeeCCC------------
Q psy14440 583 --TGH----------------KAPVYALSFSVCGRFLASAGG-DGNVHMWDLS---NGHLLTLLTGHT------------ 628 (711)
Q Consensus 583 --~~h----------------~~~I~~la~spdg~~Lasgs~-Dg~I~iwDl~---sg~~i~~l~~h~------------ 628 (711)
... ......|.+|+||++|.++.. .+.|.+||+. +.+.+..+....
T Consensus 299 di~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~ 378 (462)
T 2ece_A 299 EIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHK 378 (462)
T ss_dssp EECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCC
T ss_pred eCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeecccccccccc
Confidence 110 234678999999999988764 6799999985 346666654321
Q ss_pred --CCEEEEEEeCCCCEEEEEe
Q psy14440 629 --DVVRALCFSRDGNILASSG 647 (711)
Q Consensus 629 --~~V~sl~fspdg~~Lasgs 647 (711)
+.-..+++++||++|+++.
T Consensus 379 ~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 379 LTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCSCCCCEEECTTSSEEEEEC
T ss_pred CCCCCCEEEEcCCCCEEEEEc
Confidence 1357899999999999888
No 239
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.01 E-value=9.8e-08 Score=100.35 Aligned_cols=269 Identities=9% Similarity=0.029 Sum_probs=162.2
Q ss_pred CCceEEEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEE
Q psy14440 375 LPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTR 454 (711)
Q Consensus 375 lps~~~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 454 (711)
+|.+..+.+.+.-....+++|+++|+++.++..++.|..|+..+..+............ ..+ .+....
T Consensus 6 ~~~~~~i~~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~-----------~g~~~~ 73 (322)
T 2fp8_A 6 SPILKEILIEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNK-AFC-----------ENSTDA 73 (322)
T ss_dssp ----CEEEEECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCH-HHH-----------TTCCCG
T ss_pred CCccceeecCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccc-ccc-----------ccccch
Confidence 34444555555445677889999999888888899999998765444322110000000 000 000000
Q ss_pred EeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEe---c-CCCCEEEEEEcC-CCCEEEEEEC-------
Q psy14440 455 TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYK---G-HGHPVWDIKFSP-HGYYFASAGH------- 522 (711)
Q Consensus 455 ~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~---~-h~~~V~~v~~sp-~g~~l~sgs~------- 522 (711)
......+.+.++++.+++..|+++...+.|..+|..++....... + ......++++.+ +|+.+++...
T Consensus 74 ~~~~~~~~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~ 153 (322)
T 2fp8_A 74 EKRPLCGRTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRG 153 (322)
T ss_dssp GGHHHHCCEEEEEEETTTTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTC
T ss_pred hccccCCCCceEEEcCCCCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccc
Confidence 000112357889999733456666555668889877554322111 1 123478899999 9987766532
Q ss_pred ----------CCeEEEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEE-EcCCcEEEEECCCCc--EEEEeeCCCCCe
Q psy14440 523 ----------DRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATG-SSDRTIRLWDCVTGS--HVRLLTGHKAPV 589 (711)
Q Consensus 523 ----------Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latg-s~Dg~I~iwD~~~~~--~v~~~~~h~~~I 589 (711)
++.|..||..+++..... ........++|++++++|+++ +..+.|.+||+.... ....+....+ .
T Consensus 154 ~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P 231 (322)
T 2fp8_A 154 VQQIMDTSDKTGRLIKYDPSTKETTLLL-KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-P 231 (322)
T ss_dssp HHHHHHHTCCCEEEEEEETTTTEEEEEE-EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-E
T ss_pred cceehcccCCCceEEEEeCCCCEEEEec-cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-C
Confidence 367888888766543322 223445789999999876665 456899999987521 1222222223 7
Q ss_pred EEEEEecCCCEEEEEeC----------CCcEEEEECCCCeEEEEeeCCC----CCEEEEEEeCCCCEEEEEeCCCcEEEE
Q psy14440 590 YALSFSVCGRFLASAGG----------DGNVHMWDLSNGHLLTLLTGHT----DVVRALCFSRDGNILASSGQDCSVKLW 655 (711)
Q Consensus 590 ~~la~spdg~~Lasgs~----------Dg~I~iwDl~sg~~i~~l~~h~----~~V~sl~fspdg~~Lasgs~Dg~V~iW 655 (711)
..++++++|++.++... .+.|..+|. .|+.+..+.... ..++++++. +++++++....+.|.++
T Consensus 232 ~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i~~~ 309 (322)
T 2fp8_A 232 GNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQEH-DGLLYIGTLFHGSVGIL 309 (322)
T ss_dssp EEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEEE-TTEEEEECSSCSEEEEE
T ss_pred CCeEECCCCCEEEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEEe-CCEEEEeecCCCceEEE
Confidence 88999999987666544 467889986 588877776442 346677764 66666666678899999
Q ss_pred eCCC
Q psy14440 656 DFAK 659 (711)
Q Consensus 656 dl~~ 659 (711)
++..
T Consensus 310 ~~~~ 313 (322)
T 2fp8_A 310 VYDK 313 (322)
T ss_dssp EC--
T ss_pred eccc
Confidence 9864
No 240
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.00 E-value=1.1e-07 Score=97.13 Aligned_cols=195 Identities=10% Similarity=0.065 Sum_probs=141.1
Q ss_pred CEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCeEEEEEecCC-CCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeE
Q psy14440 462 PVRKLSFSPDRSLLLSCSQ--DNTIRLWSLLLWRCLVVYKGHG-HPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLR 538 (711)
Q Consensus 462 ~V~~l~fspdg~~L~s~s~--Dg~V~iwdl~t~~~~~~~~~h~-~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~ 538 (711)
...++.|++|+..+++.+. ++.|+++|+.+++.+..+.... .....+++.. ++.+++.-.++.+.++|..+.+.+.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~v~viD~~t~~v~~ 100 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNIGFIYDRRTLSNIK 100 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSEEEEEETTTTEEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCEEEEEECCCCcEEE
Confidence 3689999998754444443 5799999999999998876322 2233555552 3344445578999999999999888
Q ss_pred EeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCC-----CCeEEEEEecCCCEEEEEeCCCcEEEE
Q psy14440 539 LFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHK-----APVYALSFSVCGRFLASAGGDGNVHMW 613 (711)
Q Consensus 539 ~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~-----~~I~~la~spdg~~Lasgs~Dg~I~iw 613 (711)
.+..... ....++++|+.++++..+++|.++|..+.+.++.+.-.. ..++.+.|. +|+..+....++.|.+.
T Consensus 101 ~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vI 177 (266)
T 2iwa_A 101 NFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARI 177 (266)
T ss_dssp EEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEE
T ss_pred EEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEE
Confidence 8753211 123355678777777778999999999998888776321 246788888 77655555567899999
Q ss_pred ECCCCeEEEEeeCC-------------CCCEEEEEEeCCCC-EEEEEeCCCcEEEEeCCCC
Q psy14440 614 DLSNGHLLTLLTGH-------------TDVVRALCFSRDGN-ILASSGQDCSVKLWDFAKL 660 (711)
Q Consensus 614 Dl~sg~~i~~l~~h-------------~~~V~sl~fspdg~-~Lasgs~Dg~V~iWdl~~~ 660 (711)
|..+++.+..+... ....+.|+|+++++ +++++...++|.+.++...
T Consensus 178 D~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 178 SAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp ETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred ECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 99999999888632 13568999999986 5555667889999988764
No 241
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.99 E-value=2.3e-07 Score=100.71 Aligned_cols=192 Identities=13% Similarity=0.108 Sum_probs=136.9
Q ss_pred EEc--CCCCEEEEE-eCCCeEEEEECCCC----eEEEEEe-------cCCCCEEEEEEcCCCCEEEEEECC------CeE
Q psy14440 467 SFS--PDRSLLLSC-SQDNTIRLWSLLLW----RCLVVYK-------GHGHPVWDIKFSPHGYYFASAGHD------RMA 526 (711)
Q Consensus 467 ~fs--pdg~~L~s~-s~Dg~V~iwdl~t~----~~~~~~~-------~h~~~V~~v~~sp~g~~l~sgs~D------g~i 526 (711)
.++ .++++|++. ..+++|.++|+.+. +...++. .....-..+..+|+| .++++..+ |.+
T Consensus 88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI 166 (462)
T ss_dssp TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred ccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Confidence 346 778877665 45788999999765 6666663 111234567888999 77776655 789
Q ss_pred EEEECCCCceeEEeecCCC---CeeEEEEcCCCCEEEEEE-------------------cCCcEEEEECCCCcEEEEeeC
Q psy14440 527 RLWATDSYHPLRLFVGHYS---DVDCVQFHPNSNYVATGS-------------------SDRTIRLWDCVTGSHVRLLTG 584 (711)
Q Consensus 527 ~lwd~~~~~~~~~~~~h~~---~V~~v~~sp~~~~latgs-------------------~Dg~I~iwD~~~~~~v~~~~~ 584 (711)
.++|.++++.+..+..... --..+.|+|+++.+++.. .+.+|.+||+.+++.+.++..
T Consensus 167 ~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v 246 (462)
T 2ece_A 167 LMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL 246 (462)
T ss_dssp EEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES
T ss_pred EEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEec
Confidence 9999999999888863212 234588899999888875 368999999999988887764
Q ss_pred C-C-CCeEEEEE--ecCCCEEEEEe------CCCcEEEEECCCCeE--EEEe--eCC----------------CCCEEEE
Q psy14440 585 H-K-APVYALSF--SVCGRFLASAG------GDGNVHMWDLSNGHL--LTLL--TGH----------------TDVVRAL 634 (711)
Q Consensus 585 h-~-~~I~~la~--spdg~~Lasgs------~Dg~I~iwDl~sg~~--i~~l--~~h----------------~~~V~sl 634 (711)
. . .....+.| +|+|+++++++ .+++|.+|....|+. +..+ ... ......|
T Consensus 247 g~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I 326 (462)
T 2ece_A 247 GEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDI 326 (462)
T ss_dssp CTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCE
T ss_pred CCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEE
Confidence 2 1 23445555 99999988877 456888877655542 1211 110 2346789
Q ss_pred EEeCCCCEEEEEeC-CCcEEEEeCCC
Q psy14440 635 CFSRDGNILASSGQ-DCSVKLWDFAK 659 (711)
Q Consensus 635 ~fspdg~~Lasgs~-Dg~V~iWdl~~ 659 (711)
.+|+||++|.++.. .+.|.+||+..
T Consensus 327 ~lS~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 327 DISLDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp EECTTSCEEEEEETTTTEEEEEECSS
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecC
Confidence 99999998887765 68999999964
No 242
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.92 E-value=2.2e-07 Score=94.02 Aligned_cols=185 Identities=14% Similarity=0.141 Sum_probs=133.5
Q ss_pred cccCC--EEEEEEcCCCCEEEEEeCCC--eEEEEECCCCeEEEEEecCCCC-EEEEEEcCCCCEEEE-EECCCeEEEEEC
Q psy14440 458 GHEGP--VRKLSFSPDRSLLLSCSQDN--TIRLWSLLLWRCLVVYKGHGHP-VWDIKFSPHGYYFAS-AGHDRMARLWAT 531 (711)
Q Consensus 458 ~h~~~--V~~l~fspdg~~L~s~s~Dg--~V~iwdl~t~~~~~~~~~h~~~-V~~v~~sp~g~~l~s-gs~Dg~i~lwd~ 531 (711)
.|... ..++.|+ ++.++.+++.+| .|+++|+.+++.+..+...... --.+... +..+.. .-.++.+.+||.
T Consensus 38 phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~ 114 (262)
T 3nol_A 38 PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNGLGFVWNI 114 (262)
T ss_dssp ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEET
T ss_pred cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeCCEEEEEEC
Confidence 45433 4789998 676667777766 8999999999999888754322 1234443 444444 446899999999
Q ss_pred CCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCC--C---CCeEEEEEecCCCEEEEEeC
Q psy14440 532 DSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH--K---APVYALSFSVCGRFLASAGG 606 (711)
Q Consensus 532 ~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h--~---~~I~~la~spdg~~Lasgs~ 606 (711)
++.+.+..+..... ...+++++..|+.+..+++|.++|..+.+.++.+... . ..++.+.|. +|+..+..-.
T Consensus 115 ~t~~~~~ti~~~~e---G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~ 190 (262)
T 3nol_A 115 RNLRQVRSFNYDGE---GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQ 190 (262)
T ss_dssp TTCCEEEEEECSSC---CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred ccCcEEEEEECCCC---ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEcc
Confidence 99999988874332 2233356777777766788999999999988877542 1 345667886 7765555556
Q ss_pred CCcEEEEECCCCeEEEEeeCC------------CCCEEEEEEeCCCCEEEEEeCC
Q psy14440 607 DGNVHMWDLSNGHLLTLLTGH------------TDVVRALCFSRDGNILASSGQD 649 (711)
Q Consensus 607 Dg~I~iwDl~sg~~i~~l~~h------------~~~V~sl~fspdg~~Lasgs~D 649 (711)
++.|.+.|.++|+.+..+... ....+.|+|+++++.|+..|..
T Consensus 191 ~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 191 TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 889999999999999888642 1357899999998888777754
No 243
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.89 E-value=1.5e-07 Score=109.49 Aligned_cols=261 Identities=8% Similarity=-0.021 Sum_probs=169.0
Q ss_pred CCEEEEEeCCCeEEEEeCCCCceeeecc--------------------CccccccccccCCcEEEEEecCCCeeEEEeec
Q psy14440 399 VSILAVGFSESYIKLWSLVPQKLKAMKS--------------------SDQLQDIEMECDDILVRIMDERNAETTRTLVG 458 (711)
Q Consensus 399 g~~LatG~~dg~I~vWdl~~~~~~~~~~--------------------~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~ 458 (711)
+..|++++.++.|.-+|..+++..-... .-....+.+++.++.+..+|..+++.+..+..
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~ 145 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQQT 145 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEeeeecc
Confidence 3455566667777777766554321110 00123455667788999999999998877654
Q ss_pred cc----CCEEE-EEEcCCCCEEEEEeC------CCeEEEEECCCCeEEEEEecCC-C-----------------------
Q psy14440 459 HE----GPVRK-LSFSPDRSLLLSCSQ------DNTIRLWSLLLWRCLVVYKGHG-H----------------------- 503 (711)
Q Consensus 459 h~----~~V~~-l~fspdg~~L~s~s~------Dg~V~iwdl~t~~~~~~~~~h~-~----------------------- 503 (711)
.. ..+.+ ..+ .++ .+++++. +|.|+.+|..+++.+..+.... .
T Consensus 146 ~~~~~~~~~~~~P~v-~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w 223 (668)
T 1kv9_A 146 TDPAKPYSITGAPRV-VKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYW 223 (668)
T ss_dssp SCTTSSCBCCSCCEE-ETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHH
T ss_pred CCCCCcceecCCCEE-ECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCcccee
Confidence 21 11111 011 134 5555543 5899999999999998875310 0
Q ss_pred -------CEEEEEEcCCCCEEEEEECCC-------------------eEEEEECCCCceeEEeec--CC-------CCee
Q psy14440 504 -------PVWDIKFSPHGYYFASAGHDR-------------------MARLWATDSYHPLRLFVG--HY-------SDVD 548 (711)
Q Consensus 504 -------~V~~v~~sp~g~~l~sgs~Dg-------------------~i~lwd~~~~~~~~~~~~--h~-------~~V~ 548 (711)
....+++.+.+..++.++.++ .|..+|.++++.+..+.. |. ....
T Consensus 224 ~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~ 303 (668)
T 1kv9_A 224 KLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQIT 303 (668)
T ss_dssp HHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEE
T ss_pred eeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcE
Confidence 011367788777888887766 399999999998877764 22 2222
Q ss_pred EEEEcCCCC---EEEEEEcCCcEEEEECCCCcEEEEeeCCC-----------C-C------------------------e
Q psy14440 549 CVQFHPNSN---YVATGSSDRTIRLWDCVTGSHVRLLTGHK-----------A-P------------------------V 589 (711)
Q Consensus 549 ~v~~sp~~~---~latgs~Dg~I~iwD~~~~~~v~~~~~h~-----------~-~------------------------I 589 (711)
...+..+|+ .++.++.+|.++++|..+|+.+..+.... + + -
T Consensus 304 ~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w 383 (668)
T 1kv9_A 304 LAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNW 383 (668)
T ss_dssp EEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCS
T ss_pred EEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCC
Confidence 233333665 68889999999999999999874432111 0 0 0
Q ss_pred EEEEEecCCCEEEEEe------------------------------------CCCcEEEEECCCCeEEEEeeCCCCCEEE
Q psy14440 590 YALSFSVCGRFLASAG------------------------------------GDGNVHMWDLSNGHLLTLLTGHTDVVRA 633 (711)
Q Consensus 590 ~~la~spdg~~Lasgs------------------------------------~Dg~I~iwDl~sg~~i~~l~~h~~~V~s 633 (711)
..++++|+...+++.. .+|.|..||+.+|+.+-....+. .+..
T Consensus 384 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~ 462 (668)
T 1kv9_A 384 HSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT-HWNG 462 (668)
T ss_dssp SCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS-SCCC
T ss_pred CcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC-CCcC
Confidence 1267788776665421 24789999999999987776433 2333
Q ss_pred EEEeCCCCEEEEEeCCCcEEEEeCCCCCC
Q psy14440 634 LCFSRDGNILASSGQDCSVKLWDFAKLSD 662 (711)
Q Consensus 634 l~fspdg~~Lasgs~Dg~V~iWdl~~~~~ 662 (711)
..+...+.++++|+.||.|++||..+...
T Consensus 463 ~~~~t~gg~vf~g~~dg~l~a~d~~tG~~ 491 (668)
T 1kv9_A 463 GTLSTAGNLVFQGTAAGQMHAYSADKGEA 491 (668)
T ss_dssp CEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred ceeEeCCCEEEEECCcccchhhhhhcChh
Confidence 34555788899999999999999987544
No 244
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.88 E-value=2.8e-06 Score=86.42 Aligned_cols=220 Identities=11% Similarity=0.008 Sum_probs=140.8
Q ss_pred CceEEEEECCCCCEE-EEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEEE
Q psy14440 388 QQVTCAEISEDVSIL-AVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKL 466 (711)
Q Consensus 388 ~~V~~l~fs~dg~~L-atG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l 466 (711)
..+.+++|++++..| ++-..++.|.++++.+.... ..+........++
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-------------------------------~~~~~~~~~p~~i 84 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT-------------------------------TIIRQDLGSPEGI 84 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE-------------------------------EEECTTCCCEEEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcE-------------------------------EEEECCCCCccEE
Confidence 357789999865544 44555678888887543211 1111112456899
Q ss_pred EEcCCCCEEEEE-eCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEEC---CCeEEEEECCCCceeEEeec
Q psy14440 467 SFSPDRSLLLSC-SQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGH---DRMARLWATDSYHPLRLFVG 542 (711)
Q Consensus 467 ~fspdg~~L~s~-s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~---Dg~i~lwd~~~~~~~~~~~~ 542 (711)
++++++..|+.+ ...+.|.++++..................+++++++..+..+.. .+.|..++.+..........
T Consensus 85 a~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~ 164 (267)
T 1npe_A 85 ALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQD 164 (267)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECT
T ss_pred EEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEEC
Confidence 999976666555 45678999998754332233322346789999996555555443 46888888875432222223
Q ss_pred CCCCeeEEEEcCCCCEEEEEE-cCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCCCeE
Q psy14440 543 HYSDVDCVQFHPNSNYVATGS-SDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAG-GDGNVHMWDLSNGHL 620 (711)
Q Consensus 543 h~~~V~~v~~sp~~~~latgs-~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs-~Dg~I~iwDl~sg~~ 620 (711)
.......+++++++.+|+.+. ..+.|.++|...+.....+.+ ......+++. +..|+.+. ..+.|.++|..+++.
T Consensus 165 ~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~ 241 (267)
T 1npe_A 165 NLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKE 241 (267)
T ss_dssp TCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCc
Confidence 345678999999877665555 467899999875544333333 2334667665 44555444 568999999999999
Q ss_pred EEEeeCCC-CCEEEEEEeCCCC
Q psy14440 621 LTLLTGHT-DVVRALCFSRDGN 641 (711)
Q Consensus 621 i~~l~~h~-~~V~sl~fspdg~ 641 (711)
+..+.... ...+.+++.+++.
T Consensus 242 ~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 242 MDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEEECCSSCCCCCCEEEECSCC
T ss_pred eEEEccccccccceeeecCccC
Confidence 88886433 2467888888765
No 245
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.86 E-value=6.2e-06 Score=97.78 Aligned_cols=263 Identities=10% Similarity=0.087 Sum_probs=171.4
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccC---c--------cccccccccCCcEEEEEecCCCeeEEEeec
Q psy14440 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSS---D--------QLQDIEMECDDILVRIMDERNAETTRTLVG 458 (711)
Q Consensus 390 V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~---~--------~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~ 458 (711)
|.++....+|.+.+ |+.++-|..|+..+.++...... . ....+-+++.++-+..++..+++.......
T Consensus 175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~ 253 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHS 253 (795)
T ss_dssp CEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECCC
T ss_pred eEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecC
Confidence 88888888886655 56554588888766654432110 0 111222333333466777766554433222
Q ss_pred -------ccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEec-------CCCCEEEEEEcCCCCEEEEEECCC
Q psy14440 459 -------HEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKG-------HGHPVWDIKFSPHGYYFASAGHDR 524 (711)
Q Consensus 459 -------h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~-------h~~~V~~v~~sp~g~~l~sgs~Dg 524 (711)
....|.++....+|.+ ..|+.+| |.+||..++........ ....|.++....+|. +..|+.++
T Consensus 254 ~~~~~~l~~~~i~~i~~d~~g~l-Wigt~~G-l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~ 330 (795)
T 4a2l_A 254 PSNPKSISSNYIRSLAMDSQNRL-WIGTFND-LNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFG 330 (795)
T ss_dssp TTCTTSCSCSBEEEEEECTTSCE-EEEESSC-EEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSS
T ss_pred CCCccccCCCeEEEEEEcCCCCE-EEEeCCh-hheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCC
Confidence 1356999999888864 4455554 99999887765443221 235799999998885 56677777
Q ss_pred eEEEEECCCCceeEEee------cCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeC--------CCCCeE
Q psy14440 525 MARLWATDSYHPLRLFV------GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTG--------HKAPVY 590 (711)
Q Consensus 525 ~i~lwd~~~~~~~~~~~------~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~--------h~~~I~ 590 (711)
-|..|+..+........ .....|.++....+|+ |..|+.++-|..||..++........ ....|.
T Consensus 331 Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~ 409 (795)
T 4a2l_A 331 GLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIK 409 (795)
T ss_dssp CEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEE
T ss_pred CeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEE
Confidence 88889876543222111 1235689999887776 55678787899999887765443211 235799
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEee----CCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 591 ALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLT----GHTDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 591 ~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~----~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
+++...+|+.|..|+.++.|.+||..+++...... .....|.++....+|++.+.. . +.|.+||..+
T Consensus 410 ~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~ 480 (795)
T 4a2l_A 410 AVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQ 480 (795)
T ss_dssp EEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTT
T ss_pred EEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCC
Confidence 99999999867778877789999998877543322 134579999998888866644 4 4588888754
No 246
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.83 E-value=9.6e-07 Score=102.69 Aligned_cols=248 Identities=11% Similarity=0.092 Sum_probs=163.8
Q ss_pred CCEEEEEeCCCeEEEEeCCCCceeeeccC------------c--cccccccccC------CcEEEEEecCCCeeEEEeec
Q psy14440 399 VSILAVGFSESYIKLWSLVPQKLKAMKSS------------D--QLQDIEMECD------DILVRIMDERNAETTRTLVG 458 (711)
Q Consensus 399 g~~LatG~~dg~I~vWdl~~~~~~~~~~~------------~--~~~~l~~~~~------d~~i~i~d~~~~~~~~~l~~ 458 (711)
+..|++++.|+.|..+|..++++.-.... . ....+.++.. ++.++.+|..+++.+..+..
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 45777888899999999877664321111 0 0122333322 58899999999999877652
Q ss_pred cc-------------------------------CCEEEEEEcCCCCEEEEEeCCC-------------------eEEEEE
Q psy14440 459 HE-------------------------------GPVRKLSFSPDRSLLLSCSQDN-------------------TIRLWS 488 (711)
Q Consensus 459 h~-------------------------------~~V~~l~fspdg~~L~s~s~Dg-------------------~V~iwd 488 (711)
.. .....+++++++..++.++.++ .|..+|
T Consensus 197 ~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD 276 (668)
T 1kv9_A 197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIR 276 (668)
T ss_dssp SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEc
Confidence 10 0112468888888888888776 399999
Q ss_pred CCCCeEEEEEecC--C-------CCEEEEEEcCCCC---EEEEEECCCeEEEEECCCCceeEEeecCC------------
Q psy14440 489 LLLWRCLVVYKGH--G-------HPVWDIKFSPHGY---YFASAGHDRMARLWATDSYHPLRLFVGHY------------ 544 (711)
Q Consensus 489 l~t~~~~~~~~~h--~-------~~V~~v~~sp~g~---~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~------------ 544 (711)
..+++.+..++.. . .+.....+..+|+ .++.++.+|.++++|..+++.+.......
T Consensus 277 ~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g 356 (668)
T 1kv9_A 277 PDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATG 356 (668)
T ss_dssp TTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTC
T ss_pred CCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccC
Confidence 9999999888752 2 2222223333564 68899999999999999998774332111
Q ss_pred CC------------------------eeEEEEcCCCCEEEEEE------------------------------------c
Q psy14440 545 SD------------------------VDCVQFHPNSNYVATGS------------------------------------S 564 (711)
Q Consensus 545 ~~------------------------V~~v~~sp~~~~latgs------------------------------------~ 564 (711)
.. -..++++|+...+++.. .
T Consensus 357 ~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~ 436 (668)
T 1kv9_A 357 RPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVV 436 (668)
T ss_dssp CEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGC
T ss_pred CccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCc
Confidence 00 01267777766655421 2
Q ss_pred CCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCCE-EEEEEeCCCC-E
Q psy14440 565 DRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVV-RALCFSRDGN-I 642 (711)
Q Consensus 565 Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V-~sl~fspdg~-~ 642 (711)
+|.|..||+.+|+.+..+..+ .......+...|.++++|+.||.|++||.++|+.+..+....+.. .-+.+..+|+ +
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~y 515 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQY 515 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred cceEEEEeCCCCcEEEEccCC-CCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEEE
Confidence 378999999999988776533 233333455568899999999999999999999998887543211 2344455776 4
Q ss_pred EEEEe
Q psy14440 643 LASSG 647 (711)
Q Consensus 643 Lasgs 647 (711)
++.++
T Consensus 516 va~~~ 520 (668)
T 1kv9_A 516 VAIMA 520 (668)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 44443
No 247
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.80 E-value=2.7e-07 Score=99.06 Aligned_cols=233 Identities=8% Similarity=-0.044 Sum_probs=136.5
Q ss_pred EEEECCCCCEEEEEe----------CCCeEEEEeCCCCceeeec------------------cCcccccccccc--CCcE
Q psy14440 392 CAEISEDVSILAVGF----------SESYIKLWSLVPQKLKAMK------------------SSDQLQDIEMEC--DDIL 441 (711)
Q Consensus 392 ~l~fs~dg~~LatG~----------~dg~I~vWdl~~~~~~~~~------------------~~~~~~~l~~~~--~d~~ 441 (711)
.+.+|+||++++++. .++.|.+||+.+.+..... .+++...+.+.. ....
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~ 148 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA 148 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence 799999999998886 3678999998776543221 112222333222 1233
Q ss_pred EEE--EecCCCeeEEEeecccCCEEEEEEcCCCC-EEEEEeCCCeEEEEECCC-----CeEEE----EEecCCCCEEEEE
Q psy14440 442 VRI--MDERNAETTRTLVGHEGPVRKLSFSPDRS-LLLSCSQDNTIRLWSLLL-----WRCLV----VYKGHGHPVWDIK 509 (711)
Q Consensus 442 i~i--~d~~~~~~~~~l~~h~~~V~~l~fspdg~-~L~s~s~Dg~V~iwdl~t-----~~~~~----~~~~h~~~V~~v~ 509 (711)
+.+ +|..+ ...+.. .+. ..+.++++ .+++.+.||.+.+.|+.+ ++... .+.....+. .
T Consensus 149 v~V~~iD~~t---v~~i~v-~~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~ 218 (368)
T 1mda_H 149 AGLSVPGASD---DQLTKS-ASC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q 218 (368)
T ss_dssp EEEEETTTEE---EEEEEC-SSC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E
T ss_pred EEEEEEchhh---ceEEEC-CCc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c
Confidence 444 44433 222211 000 11223332 334445566666666655 22211 011112233 2
Q ss_pred EcCCCCEEEEEECCCeEEEEECCCCc--eeEEeec----------CCCCeeEEEEcCCCCEEEEEEc-C--------CcE
Q psy14440 510 FSPHGYYFASAGHDRMARLWATDSYH--PLRLFVG----------HYSDVDCVQFHPNSNYVATGSS-D--------RTI 568 (711)
Q Consensus 510 ~sp~g~~l~sgs~Dg~i~lwd~~~~~--~~~~~~~----------h~~~V~~v~~sp~~~~latgs~-D--------g~I 568 (711)
++++..++..+. +.+.+.|..... .+..+.. .......+++++++++++++.. . +.+
T Consensus 219 -~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~ 296 (368)
T 1mda_H 219 -ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENT 296 (368)
T ss_dssp -ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEE
T ss_pred -cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCE
Confidence 455555555556 888888886532 1221110 0112233789999998887643 2 356
Q ss_pred EEEECCCCcEEEEeeCCCCCeEEEEEecCCCE-EEEEe-CCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeC
Q psy14440 569 RLWDCVTGSHVRLLTGHKAPVYALSFSVCGRF-LASAG-GDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSR 638 (711)
Q Consensus 569 ~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~-Lasgs-~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fsp 638 (711)
.++|+.+++.++.+.... ...+++|++||++ +++.. .++.|.++|+.+++.+..+..... .+.+++.+
T Consensus 297 ~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~-P~~i~~~~ 366 (368)
T 1mda_H 297 SSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG-PESLSVQN 366 (368)
T ss_dssp EEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSC-CCEEECCC
T ss_pred EEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCC-CCEEEeec
Confidence 699999999988876443 5789999999984 55666 589999999999999999975543 35666543
No 248
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.77 E-value=2.1e-06 Score=86.01 Aligned_cols=190 Identities=14% Similarity=0.096 Sum_probs=134.6
Q ss_pred EEEeecccC--CEEEEEEcCCCCEEEEEeCC--CeEEEEECCCCeEEEEEecCCCC-EEEEEEcCCCCEEEEEECCCeEE
Q psy14440 453 TRTLVGHEG--PVRKLSFSPDRSLLLSCSQD--NTIRLWSLLLWRCLVVYKGHGHP-VWDIKFSPHGYYFASAGHDRMAR 527 (711)
Q Consensus 453 ~~~l~~h~~--~V~~l~fspdg~~L~s~s~D--g~V~iwdl~t~~~~~~~~~h~~~-V~~v~~sp~g~~l~sgs~Dg~i~ 527 (711)
+.++ .|.. -..++.|+. +.++.+.+.+ +.|+++|+.+++.+......... --.+++. .++.++....++.+.
T Consensus 12 ~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~v~ 88 (243)
T 3mbr_X 12 VKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHEGF 88 (243)
T ss_dssp EEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSEEE
T ss_pred EEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCEEE
Confidence 3444 4543 467999985 5555666665 48999999999999888643322 1234443 234555555789999
Q ss_pred EEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCC-----CCeEEEEEecCCCEEE
Q psy14440 528 LWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHK-----APVYALSFSVCGRFLA 602 (711)
Q Consensus 528 lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~-----~~I~~la~spdg~~La 602 (711)
+||.++.+.+..+...... ..++ .++..|+.+..+++|.++|..+.+.++.+.-.. ..++.+.|. +|+..+
T Consensus 89 v~D~~tl~~~~ti~~~~~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lya 164 (243)
T 3mbr_X 89 VYDLATLTPRARFRYPGEG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLA 164 (243)
T ss_dssp EEETTTTEEEEEEECSSCC-CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEE
T ss_pred EEECCcCcEEEEEeCCCCc-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEE
Confidence 9999999999888753332 3444 467777777778899999999999888776422 345677776 676555
Q ss_pred EEeCCCcEEEEECCCCeEEEEeeCC-------------CCCEEEEEEeCCCCEEEEEeCC
Q psy14440 603 SAGGDGNVHMWDLSNGHLLTLLTGH-------------TDVVRALCFSRDGNILASSGQD 649 (711)
Q Consensus 603 sgs~Dg~I~iwDl~sg~~i~~l~~h-------------~~~V~sl~fspdg~~Lasgs~D 649 (711)
....+..|.+.|.++|+.+..+... ....+.|+|+++++.|+..|.-
T Consensus 165 nvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 165 NVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp EETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred EECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 5546789999999999999887621 1367899999988877776643
No 249
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.76 E-value=1.2e-05 Score=83.65 Aligned_cols=226 Identities=9% Similarity=-0.007 Sum_probs=141.8
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEEEE
Q psy14440 388 QQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLS 467 (711)
Q Consensus 388 ~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~ 467 (711)
.....++|+++|+++++-..++.|..|+..+... .++. ..+...+++
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~---------------------~~~~------------~~~~p~gia 78 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQ---------------------IHAT------------VEGKVSGLA 78 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEE---------------------EEEE------------CSSEEEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceE---------------------EEEe------------CCCCceeEE
Confidence 5678999999999887777788888888653211 1111 123578999
Q ss_pred EcCCCCEEEEEeCC-C-eEEEEECCCCeEEEEEec-CCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCce-eEEee--
Q psy14440 468 FSPDRSLLLSCSQD-N-TIRLWSLLLWRCLVVYKG-HGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHP-LRLFV-- 541 (711)
Q Consensus 468 fspdg~~L~s~s~D-g-~V~iwdl~t~~~~~~~~~-h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~-~~~~~-- 541 (711)
++++|+++++.... + .|..++..+++....... .......++..+.+..+++...++.|.++|..++.. +....
T Consensus 79 ~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~ 158 (306)
T 2p4o_A 79 FTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPM 158 (306)
T ss_dssp ECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGG
T ss_pred EcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCc
Confidence 99999865555432 2 477777777765443332 223334555555554455544688899998875421 21111
Q ss_pred -------cCCCCeeEEEEcCCCCEEEEEE-cCCcEEEEECCC-CcE--EEEeeCCCCCeEEEEEecCCCEEEEEeCCCcE
Q psy14440 542 -------GHYSDVDCVQFHPNSNYVATGS-SDRTIRLWDCVT-GSH--VRLLTGHKAPVYALSFSVCGRFLASAGGDGNV 610 (711)
Q Consensus 542 -------~h~~~V~~v~~sp~~~~latgs-~Dg~I~iwD~~~-~~~--v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I 610 (711)
+.....+.+ ++++++|+++. ..+.|..||+.. ++. ...+.. ......++++++|+++++....+.|
T Consensus 159 ~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V 235 (306)
T 2p4o_A 159 LARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSV 235 (306)
T ss_dssp GSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCE
T ss_pred cccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeE
Confidence 112234455 77887666554 567899999874 321 122211 1345678999999887776677899
Q ss_pred EEEECCCCeEEE--EeeCCCCCEEEEEEe---CCCCEEEEEeCCC
Q psy14440 611 HMWDLSNGHLLT--LLTGHTDVVRALCFS---RDGNILASSGQDC 650 (711)
Q Consensus 611 ~iwDl~sg~~i~--~l~~h~~~V~sl~fs---pdg~~Lasgs~Dg 650 (711)
.+||.. |+... .+.......++++|. ++++.|+.++..+
T Consensus 236 ~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 236 VRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp EEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred EEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECCCC
Confidence 999975 66533 333333568999998 7888777766543
No 250
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.75 E-value=1.8e-07 Score=105.00 Aligned_cols=186 Identities=13% Similarity=0.123 Sum_probs=138.8
Q ss_pred CCCEEEEEeC-CCeEEEEECCCCeEEEEEecC-CCCEEEEEE-c-CCCCEEEEEE------------------CCCeEEE
Q psy14440 471 DRSLLLSCSQ-DNTIRLWSLLLWRCLVVYKGH-GHPVWDIKF-S-PHGYYFASAG------------------HDRMARL 528 (711)
Q Consensus 471 dg~~L~s~s~-Dg~V~iwdl~t~~~~~~~~~h-~~~V~~v~~-s-p~g~~l~sgs------------------~Dg~i~l 528 (711)
||++|+.+.. ++.|.+.|+.+.++...+.-- ......+++ + |++.++++++ .++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 8888887765 557999999999998866532 355788888 5 8999998885 2457999
Q ss_pred EECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCC--------------------------------------cEEE
Q psy14440 529 WATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR--------------------------------------TIRL 570 (711)
Q Consensus 529 wd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg--------------------------------------~I~i 570 (711)
+|.++.+.+..+.--. .-..++++|+|+++++.+.+. .|.+
T Consensus 180 ID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~V 258 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKV 258 (595)
T ss_dssp EETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEE
T ss_pred EECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEE
Confidence 9999988777665322 457788999999999888543 4677
Q ss_pred EECCC--CcE-EEEeeCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCCCe------------EEEEeeCCCCCEEEE
Q psy14440 571 WDCVT--GSH-VRLLTGHKAPVYALSFSVCGRFLASAG-GDGNVHMWDLSNGH------------LLTLLTGHTDVVRAL 634 (711)
Q Consensus 571 wD~~~--~~~-v~~~~~h~~~I~~la~spdg~~Lasgs-~Dg~I~iwDl~sg~------------~i~~l~~h~~~V~sl 634 (711)
.|..+ ++. ++.+... ....++.++|||+++++++ .+.+|.++|+.+.+ .+..+. -......+
T Consensus 259 ID~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~ 336 (595)
T 1fwx_A 259 VDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHT 336 (595)
T ss_dssp EECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEE
T ss_pred EeCcccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceE
Confidence 77776 444 4444322 2456789999999888776 57899999998653 344443 23457899
Q ss_pred EEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 635 CFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 635 ~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
+|+++|...++.-.|+.|.+||+..
T Consensus 337 aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 337 AFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EECTTSEEEEEETTTTEEEEEEHHH
T ss_pred EECCCCeEEEEEecCCcEEEEEhhH
Confidence 9999995556667899999999876
No 251
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.73 E-value=1.4e-05 Score=94.80 Aligned_cols=264 Identities=9% Similarity=0.038 Sum_probs=172.2
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCc-----------------cccccccccCCcEEEEEecCC
Q psy14440 387 RQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSD-----------------QLQDIEMECDDILVRIMDERN 449 (711)
Q Consensus 387 ~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~-----------------~~~~l~~~~~d~~i~i~d~~~ 449 (711)
...|.++....+|.+.+....+| |.+|+..+.++....... ....+-+++.. -+.+++..+
T Consensus 214 ~~~i~~i~~d~~g~lwigt~~~G-l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~ 291 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWVATEGAG-LFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFN-DLNIYHEGT 291 (795)
T ss_dssp CCCEEEEEEEETTEEEEEEBSSC-EEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEESS-CEEEEETTT
T ss_pred CCeeEEEEEcCCCCEEEEECCCC-eEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEeCC-hhheEcCCC
Confidence 45688888888877655443445 888888765544332210 01122233333 466777766
Q ss_pred CeeEEEeec-------ccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEec-------CCCCEEEEEEcCCCC
Q psy14440 450 AETTRTLVG-------HEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKG-------HGHPVWDIKFSPHGY 515 (711)
Q Consensus 450 ~~~~~~l~~-------h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~-------h~~~V~~v~~sp~g~ 515 (711)
......... ....|.++....+|. |..|+.++-|..|+..+..... +.. ....|.++....+|+
T Consensus 292 ~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~-~~~~~~~~~l~~~~V~~i~~d~~g~ 369 (795)
T 4a2l_A 292 DSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKN-IRNIPYKNSLSDNVVSCIVEDKDKN 369 (795)
T ss_dssp TEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEE-ECCCTTSSSCSCSSEEEEEECTTSC
T ss_pred CeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceE-EcCCCCCCCCCCCeeEEEEECCCCC
Confidence 654433221 235799999998886 6667777779999876544322 221 245699999988875
Q ss_pred EEEEEECCCeEEEEECCCCceeEEeec--------CCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEee----
Q psy14440 516 YFASAGHDRMARLWATDSYHPLRLFVG--------HYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLT---- 583 (711)
Q Consensus 516 ~l~sgs~Dg~i~lwd~~~~~~~~~~~~--------h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~---- 583 (711)
+..|+.++-+..|+..++........ ....|.+++...+++.|.+|+.++-|.+||..+++......
T Consensus 370 -lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~ 448 (795)
T 4a2l_A 370 -LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQ 448 (795)
T ss_dssp -EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSC
T ss_pred -EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCC
Confidence 55677787899999887654332211 23568999998888867788887889999998876544322
Q ss_pred CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeC------CCCCEEEEEEeCCCCEEEEEeCCCcEEEEeC
Q psy14440 584 GHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTG------HTDVVRALCFSRDGNILASSGQDCSVKLWDF 657 (711)
Q Consensus 584 ~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~------h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl 657 (711)
.+...|.++...++|++.+.. . +.|.+||..+++....... ....|.++....+|++.+.. . +.|..||.
T Consensus 449 l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt-~-~Gl~~~~~ 524 (795)
T 4a2l_A 449 LVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG-E-EGLSVFKQ 524 (795)
T ss_dssp CSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE-S-SCEEEEEE
T ss_pred cCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEe-C-CceEEEeC
Confidence 134579999998888765544 4 4589999888765433211 23579999999998876654 3 56888886
Q ss_pred CC
Q psy14440 658 AK 659 (711)
Q Consensus 658 ~~ 659 (711)
.+
T Consensus 525 ~~ 526 (795)
T 4a2l_A 525 EG 526 (795)
T ss_dssp ET
T ss_pred CC
Confidence 53
No 252
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.72 E-value=3.1e-07 Score=103.01 Aligned_cols=195 Identities=12% Similarity=0.062 Sum_probs=138.1
Q ss_pred CEEEEEE-c-CCCCEEEEEe------------------CCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEE
Q psy14440 462 PVRKLSF-S-PDRSLLLSCS------------------QDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAG 521 (711)
Q Consensus 462 ~V~~l~f-s-pdg~~L~s~s------------------~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs 521 (711)
....+++ + |+++++++++ .++.|.++|..+.+.+..+..-. .-..++++++|+++++++
T Consensus 135 ~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~ 213 (595)
T 1fwx_A 135 GIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTS 213 (595)
T ss_dssp SEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEE
T ss_pred CCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEe
Confidence 4667787 4 8888888874 24679999999999888876423 345678999999999888
Q ss_pred CCC--------------------------------------eEEEEECCC--Cce-eEEeecCCCCeeEEEEcCCCCEEE
Q psy14440 522 HDR--------------------------------------MARLWATDS--YHP-LRLFVGHYSDVDCVQFHPNSNYVA 560 (711)
Q Consensus 522 ~Dg--------------------------------------~i~lwd~~~--~~~-~~~~~~h~~~V~~v~~sp~~~~la 560 (711)
.+. .|.+.|..+ ++. ++.+.. .....++.++|||++++
T Consensus 214 ~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~ 292 (595)
T 1fwx_A 214 YNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLC 292 (595)
T ss_dssp SCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEE
T ss_pred cCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEE
Confidence 553 466777776 444 344432 23567899999999877
Q ss_pred EEE-cCCcEEEEECCCCc------------EEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC----------
Q psy14440 561 TGS-SDRTIRLWDCVTGS------------HVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN---------- 617 (711)
Q Consensus 561 tgs-~Dg~I~iwD~~~~~------------~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~s---------- 617 (711)
+++ .+.+|.++|+.+.+ .+.... -......++|+++|....+.-.|+.|.+||+.+
T Consensus 293 V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~ 371 (595)
T 1fwx_A 293 VAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKV 371 (595)
T ss_dssp EECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSC
T ss_pred EeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhccccc
Confidence 766 57899999998653 233333 234578899999994444566789999999977
Q ss_pred CeEEEEeeCCCCCE-----EEEEEeCCCCEEEEEeC---CCc----------EEEEeCCC
Q psy14440 618 GHLLTLLTGHTDVV-----RALCFSRDGNILASSGQ---DCS----------VKLWDFAK 659 (711)
Q Consensus 618 g~~i~~l~~h~~~V-----~sl~fspdg~~Lasgs~---Dg~----------V~iWdl~~ 659 (711)
.+.+..+..|-.+- .++.+++||++|+++.. |+. -.++|+..
T Consensus 372 ~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~ 431 (595)
T 1fwx_A 372 DPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISG 431 (595)
T ss_dssp CCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSS
T ss_pred ceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCC
Confidence 56788887665422 12245789999998764 332 17888853
No 253
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.72 E-value=4.7e-06 Score=84.96 Aligned_cols=198 Identities=7% Similarity=-0.010 Sum_probs=133.2
Q ss_pred cCCC--ceEEEEECCCCCEEEEEeC--CCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEee-cc
Q psy14440 385 NARQ--QVTCAEISEDVSILAVGFS--ESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLV-GH 459 (711)
Q Consensus 385 ~h~~--~V~~l~fs~dg~~LatG~~--dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~-~h 459 (711)
.|.. ....++|++|+.+.++.+. ++.|+++|+.++++. ..+. +.
T Consensus 16 p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~-------------------------------~~i~l~~ 64 (266)
T 2iwa_A 16 PHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVE-------------------------------NIHKMDD 64 (266)
T ss_dssp ECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEE-------------------------------EEEECCT
T ss_pred ECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEE-------------------------------EEEecCC
Confidence 4553 3679999998765555443 578888888665543 2221 11
Q ss_pred cCCEEEEEEcCCCCEEEEEe-CCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeE
Q psy14440 460 EGPVRKLSFSPDRSLLLSCS-QDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLR 538 (711)
Q Consensus 460 ~~~V~~l~fspdg~~L~s~s-~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~ 538 (711)
......+++. +..|+.+. .++.|.++|..+++.+..+......-+.+ +++|+.++++..++++.++|..+.+.++
T Consensus 65 ~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~g~gl--t~Dg~~l~vs~gs~~l~viD~~t~~v~~ 140 (266)
T 2iwa_A 65 SYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKDGWGL--ATDGKILYGSDGTSILYEIDPHTFKLIK 140 (266)
T ss_dssp TCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEEEEECCSSSCCEE--EECSSSEEEECSSSEEEEECTTTCCEEE
T ss_pred CcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEEEEECCCCCeEEE--EECCCEEEEECCCCeEEEEECCCCcEEE
Confidence 1122345554 44555554 57899999999999999886331222344 4567666666678999999999988877
Q ss_pred EeecC-----CCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCC-------------CCCeEEEEEecCCCE
Q psy14440 539 LFVGH-----YSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH-------------KAPVYALSFSVCGRF 600 (711)
Q Consensus 539 ~~~~h-----~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h-------------~~~I~~la~spdg~~ 600 (711)
.+.-. ...++.+.|. ++..++....++.|.+.|..+++.+..+.-. ....+.|+|+++++.
T Consensus 141 ~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~ 219 (266)
T 2iwa_A 141 KHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKR 219 (266)
T ss_dssp EEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTE
T ss_pred EEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCE
Confidence 76522 1246678888 6644444445789999999999998888632 135689999999875
Q ss_pred EE-EEeCCCcEEEEECCCC
Q psy14440 601 LA-SAGGDGNVHMWDLSNG 618 (711)
Q Consensus 601 La-sgs~Dg~I~iwDl~sg 618 (711)
|+ ++...++|.+.++...
T Consensus 220 lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 220 IFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEEETTCSEEEEEEEEEC
T ss_pred EEEECCCCCeEEEEEEecc
Confidence 55 5556788888887543
No 254
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.70 E-value=4.2e-06 Score=84.64 Aligned_cols=180 Identities=11% Similarity=0.038 Sum_probs=130.9
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCC-CEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEe
Q psy14440 462 PVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGH-PVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLF 540 (711)
Q Consensus 462 ~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~-~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~ 540 (711)
-..++.|+ ++.++.+.+.+|.|+++|+.+++.+..+ -... .-..+++.. ++.+++...++.+.+||.++.+.+..+
T Consensus 56 ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti 132 (268)
T 3nok_A 56 FTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERTT 132 (268)
T ss_dssp CEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred ccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEEE
Confidence 34788887 4566777788899999999999988776 3222 223355543 345555567899999999999999888
Q ss_pred ecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCC-----CCeEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy14440 541 VGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHK-----APVYALSFSVCGRFLASAGGDGNVHMWDL 615 (711)
Q Consensus 541 ~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~-----~~I~~la~spdg~~Lasgs~Dg~I~iwDl 615 (711)
...... ..++ +++..|+.+..+++|.++|..+.+.++.+.-.. ..++.+.|. +|+..+....++.|.+.|.
T Consensus 133 ~~~~eG-wGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp 208 (268)
T 3nok_A 133 RYSGEG-WGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDP 208 (268)
T ss_dssp ECSSCC-CCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECT
T ss_pred eCCCce-eEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeC
Confidence 753222 3444 467888888789999999999999888776322 245677887 7765555546789999999
Q ss_pred CCCeEEEEeeCC-------------CCCEEEEEEeCCCCEEEEEeC
Q psy14440 616 SNGHLLTLLTGH-------------TDVVRALCFSRDGNILASSGQ 648 (711)
Q Consensus 616 ~sg~~i~~l~~h-------------~~~V~sl~fspdg~~Lasgs~ 648 (711)
++|+.+..+... .+..+.|+|+++++.|+..|.
T Consensus 209 ~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 209 ATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp TTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 999998887632 146799999998766655553
No 255
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.70 E-value=3.5e-06 Score=96.05 Aligned_cols=228 Identities=10% Similarity=-0.004 Sum_probs=147.7
Q ss_pred ccccccCCcEEEEEecCCCeeEEEeeccc--C--CEEE-EEEcCCCCEEEEEeC------CCeEEEEECCCCeEEEEEec
Q psy14440 432 DIEMECDDILVRIMDERNAETTRTLVGHE--G--PVRK-LSFSPDRSLLLSCSQ------DNTIRLWSLLLWRCLVVYKG 500 (711)
Q Consensus 432 ~l~~~~~d~~i~i~d~~~~~~~~~l~~h~--~--~V~~-l~fspdg~~L~s~s~------Dg~V~iwdl~t~~~~~~~~~ 500 (711)
.+.+++.++.+..+|..+++......... . .+.+ .... ++ .+++++. ++.|..+|..+++.+..+..
T Consensus 117 ~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 117 QIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-KD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred EEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-CC-EEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 45566678889999999998877654221 0 1111 1111 34 5555554 79999999999999887764
Q ss_pred CCCC-------------------------------------E-EEEEEcCCCCEEEEEECC----------------CeE
Q psy14440 501 HGHP-------------------------------------V-WDIKFSPHGYYFASAGHD----------------RMA 526 (711)
Q Consensus 501 h~~~-------------------------------------V-~~v~~sp~g~~l~sgs~D----------------g~i 526 (711)
.... + ..+++.+....++.++.+ +.|
T Consensus 195 ~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v 274 (571)
T 2ad6_A 195 TGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTI 274 (571)
T ss_dssp SSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEE
T ss_pred CCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEE
Confidence 2211 1 124556655566665532 369
Q ss_pred EEEECCCCceeEEeecC--CC-------CeeEEEEcCCCC---EEEEEEcCCcEEEEECCCCcEEEEeeCCC--------
Q psy14440 527 RLWATDSYHPLRLFVGH--YS-------DVDCVQFHPNSN---YVATGSSDRTIRLWDCVTGSHVRLLTGHK-------- 586 (711)
Q Consensus 527 ~lwd~~~~~~~~~~~~h--~~-------~V~~v~~sp~~~---~latgs~Dg~I~iwD~~~~~~v~~~~~h~-------- 586 (711)
..+|.++++.+..+... .. ....+....+|+ .++.++.+|.+.++|..+|+.+..+....
T Consensus 275 ~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~ 354 (571)
T 2ad6_A 275 WGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKV 354 (571)
T ss_dssp EEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEE
T ss_pred EEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccc
Confidence 99999999988776532 11 111122224674 57788889999999999999877654211
Q ss_pred -----CCe--------------------------EEEEEecCCCEEEEEe------------------------------
Q psy14440 587 -----APV--------------------------YALSFSVCGRFLASAG------------------------------ 605 (711)
Q Consensus 587 -----~~I--------------------------~~la~spdg~~Lasgs------------------------------ 605 (711)
.++ ..++++|++.+|++.+
T Consensus 355 d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~ 434 (571)
T 2ad6_A 355 DLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPG 434 (571)
T ss_dssp CTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEEC
T ss_pred cccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccC
Confidence 111 2357888877776653
Q ss_pred -------CCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCC
Q psy14440 606 -------GDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSD 662 (711)
Q Consensus 606 -------~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~ 662 (711)
.+|.|..||+.+|+.+.++.... .+.+..+...+..++.++.||.|+.||..+.+.
T Consensus 435 ~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~ 497 (571)
T 2ad6_A 435 PNGPTKKEMGQIRAFDLTTGKAKWTKWEKF-AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKE 497 (571)
T ss_dssp TTSTTSCCCEEEEEECTTTCCEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred ccccCCCCCCeEEEEECCCCCEEEEecCCC-CccceeEEECCCEEEEEcCCCeEEEEECCCCCE
Confidence 35789999999999887775322 222333333566777799999999999987554
No 256
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.70 E-value=3e-06 Score=96.57 Aligned_cols=245 Identities=13% Similarity=0.070 Sum_probs=157.9
Q ss_pred CCEEEEEeCCCeEEEEeCCCCceeeecc------------Cc--cccccccccC------CcEEEEEecCCCeeEEEeec
Q psy14440 399 VSILAVGFSESYIKLWSLVPQKLKAMKS------------SD--QLQDIEMECD------DILVRIMDERNAETTRTLVG 458 (711)
Q Consensus 399 g~~LatG~~dg~I~vWdl~~~~~~~~~~------------~~--~~~~l~~~~~------d~~i~i~d~~~~~~~~~l~~ 458 (711)
+..|++++.|+.|..+|..++++.-... .. ....+.++.. ++.++.+|..+++.+..+..
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 4567778888888888887665432110 00 1122333333 68999999999998876653
Q ss_pred ccCC-------------------------------------E-EEEEEcCCCCEEEEEeCC----------------CeE
Q psy14440 459 HEGP-------------------------------------V-RKLSFSPDRSLLLSCSQD----------------NTI 484 (711)
Q Consensus 459 h~~~-------------------------------------V-~~l~fspdg~~L~s~s~D----------------g~V 484 (711)
.... + ..+++.++...++.++.+ +.|
T Consensus 195 ~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v 274 (571)
T 2ad6_A 195 TGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTI 274 (571)
T ss_dssp SSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEE
T ss_pred CCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEE
Confidence 2110 0 135666666677666532 369
Q ss_pred EEEECCCCeEEEEEecCC----------CCEEEEEEcCCCC---EEEEEECCCeEEEEECCCCceeEEeecCC-------
Q psy14440 485 RLWSLLLWRCLVVYKGHG----------HPVWDIKFSPHGY---YFASAGHDRMARLWATDSYHPLRLFVGHY------- 544 (711)
Q Consensus 485 ~iwdl~t~~~~~~~~~h~----------~~V~~v~~sp~g~---~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~------- 544 (711)
..+|..+++.+..++... .++. +....+|+ .++.++.+|.++++|..+++.+..+....
T Consensus 275 ~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~ 353 (571)
T 2ad6_A 275 WGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKK 353 (571)
T ss_dssp EEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEE
T ss_pred EEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccccc
Confidence 999999999988886421 2222 22223663 57788899999999999998876554211
Q ss_pred ------CCe--------------------------eEEEEcCCCCEEEEEE-----------------------------
Q psy14440 545 ------SDV--------------------------DCVQFHPNSNYVATGS----------------------------- 563 (711)
Q Consensus 545 ------~~V--------------------------~~v~~sp~~~~latgs----------------------------- 563 (711)
..+ ..++++|+...+++.+
T Consensus 354 ~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~ 433 (571)
T 2ad6_A 354 VDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYP 433 (571)
T ss_dssp ECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEE
T ss_pred ccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceecc
Confidence 011 2357888777776654
Q ss_pred --------cCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCC-EEEE
Q psy14440 564 --------SDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDV-VRAL 634 (711)
Q Consensus 564 --------~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~-V~sl 634 (711)
.+|.|..||..+|+.+..+... ..+.+..+...+..++.++.||.|+.||.++|+.+..+...... -..+
T Consensus 434 ~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ 512 (571)
T 2ad6_A 434 GPNGPTKKEMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPM 512 (571)
T ss_dssp CTTSTTSCCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCE
T ss_pred CccccCCCCCCeEEEEECCCCCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeE
Confidence 2478999999999987776532 22333333345677888999999999999999999888743321 1223
Q ss_pred EEeCCCCEEEE
Q psy14440 635 CFSRDGNILAS 645 (711)
Q Consensus 635 ~fspdg~~Las 645 (711)
.+..+|+.++.
T Consensus 513 ~~~~~G~~yv~ 523 (571)
T 2ad6_A 513 TYSFKGKQYIG 523 (571)
T ss_dssp EEEETTEEEEE
T ss_pred EEEECCEEEEE
Confidence 45567775443
No 257
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.61 E-value=5.5e-06 Score=94.67 Aligned_cols=244 Identities=11% Similarity=0.069 Sum_probs=154.9
Q ss_pred EEEEeCCCeEEEEeCCCCceeeec-c-----------Cc--ccccccccc------CCcEEEEEecCCCeeEEEeecccC
Q psy14440 402 LAVGFSESYIKLWSLVPQKLKAMK-S-----------SD--QLQDIEMEC------DDILVRIMDERNAETTRTLVGHEG 461 (711)
Q Consensus 402 LatG~~dg~I~vWdl~~~~~~~~~-~-----------~~--~~~~l~~~~------~d~~i~i~d~~~~~~~~~l~~h~~ 461 (711)
|++++.|+.|..+|..++++.-.. . .. ....+.++. .++.|+.+|..+++.+..+.....
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~ 203 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGP 203 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSC
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCC
Confidence 777788888888888766543211 0 00 012233333 268999999999998876653211
Q ss_pred C-------------------------------------E-EEEEEcCCCCEEEEEeCC----------------CeEEEE
Q psy14440 462 P-------------------------------------V-RKLSFSPDRSLLLSCSQD----------------NTIRLW 487 (711)
Q Consensus 462 ~-------------------------------------V-~~l~fspdg~~L~s~s~D----------------g~V~iw 487 (711)
. + ..+++.++...++.++.+ +.|..+
T Consensus 204 ~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Al 283 (599)
T 1w6s_A 204 DKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGR 283 (599)
T ss_dssp HHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEE
T ss_pred ccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEE
Confidence 1 0 134566677777777665 379999
Q ss_pred ECCCCeEEEEEecCCCCEE---------EEEEc-CCC---CEEEEEECCCeEEEEECCCCceeEEeecCC----------
Q psy14440 488 SLLLWRCLVVYKGHGHPVW---------DIKFS-PHG---YYFASAGHDRMARLWATDSYHPLRLFVGHY---------- 544 (711)
Q Consensus 488 dl~t~~~~~~~~~h~~~V~---------~v~~s-p~g---~~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~---------- 544 (711)
|..+++.+..++......| -+... .+| ..++.++.+|.++++|.++++.+.......
T Consensus 284 d~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~ 363 (599)
T 1w6s_A 284 DADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDL 363 (599)
T ss_dssp ETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECT
T ss_pred eCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCccccccccc
Confidence 9999999988875332111 12222 456 467778899999999999998876543211
Q ss_pred ---CCe--------------------------eEEEEcCCCCEEEEEE--------------------------------
Q psy14440 545 ---SDV--------------------------DCVQFHPNSNYVATGS-------------------------------- 563 (711)
Q Consensus 545 ---~~V--------------------------~~v~~sp~~~~latgs-------------------------------- 563 (711)
..+ ..++++|+..++++..
T Consensus 364 ~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~ 443 (599)
T 1w6s_A 364 KTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPK 443 (599)
T ss_dssp TTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTT
T ss_pred CCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCc
Confidence 001 2356677665554431
Q ss_pred -------cCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCC-EEEEE
Q psy14440 564 -------SDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDV-VRALC 635 (711)
Q Consensus 564 -------~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~-V~sl~ 635 (711)
.+|.|..||+.+|+.+-.... ..++..-.+...|.+++.++.||.|+.||.++|+.+..++...+. ..-+.
T Consensus 444 ~~~~~~~~~G~l~A~D~~tG~~~W~~~~-~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~ 522 (599)
T 1w6s_A 444 GDRQNYEGLGQIKAYNAITGDYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMT 522 (599)
T ss_dssp SBTTTTBCCEEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEE
T ss_pred CCcccCCCcCeEEEEECCCCCEEeEecC-CCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEE
Confidence 347899999999998776642 112221122335778888999999999999999999888744321 12345
Q ss_pred EeCCCCE-EEEE
Q psy14440 636 FSRDGNI-LASS 646 (711)
Q Consensus 636 fspdg~~-Lasg 646 (711)
+..+|+. +++.
T Consensus 523 y~~~G~qyv~~~ 534 (599)
T 1w6s_A 523 YTHKGTQYVAIY 534 (599)
T ss_dssp EEETTEEEEEEE
T ss_pred EEeCCEEEEEEE
Confidence 5667773 4443
No 258
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.59 E-value=7.9e-06 Score=82.58 Aligned_cols=186 Identities=10% Similarity=0.080 Sum_probs=124.5
Q ss_pred ecCCCc--eEEEEECCCCCEEEEEeCCC--eEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecc
Q psy14440 384 LNARQQ--VTCAEISEDVSILAVGFSES--YIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGH 459 (711)
Q Consensus 384 ~~h~~~--V~~l~fs~dg~~LatG~~dg--~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h 459 (711)
..|... ...+.|+ ++.+..+++.+| .|+++|+.++++. ..+.-.
T Consensus 37 ~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~-------------------------------~~~~l~ 84 (262)
T 3nol_A 37 YPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTL-------------------------------QQIELG 84 (262)
T ss_dssp EECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEE-------------------------------EEEECC
T ss_pred ecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEE-------------------------------EEEecC
Confidence 345544 4788998 677777776665 7888888665543 222211
Q ss_pred cCCEEEEEEcCCCCEEEEEe-CCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeE
Q psy14440 460 EGPVRKLSFSPDRSLLLSCS-QDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLR 538 (711)
Q Consensus 460 ~~~V~~l~fspdg~~L~s~s-~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~ 538 (711)
..........+++.|+... .++.+.+||..+.+.+.++.... .=|.++ +++..++.+..++.|.++|..+.+.++
T Consensus 85 -~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~-eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~ 160 (262)
T 3nol_A 85 -KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG-EGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVR 160 (262)
T ss_dssp -TTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSS-CCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEE
T ss_pred -CccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCC-CceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEE
Confidence 1222222222355555554 57899999999999999887533 224455 456666666667889999999998887
Q ss_pred EeecC--C---CCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCC------------CCCeEEEEEecCCCEE
Q psy14440 539 LFVGH--Y---SDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH------------KAPVYALSFSVCGRFL 601 (711)
Q Consensus 539 ~~~~h--~---~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h------------~~~I~~la~spdg~~L 601 (711)
.+.-. . ..++.+.|. +|...+..-.+..|.+.|..+|+.+..+... ....+.|||+|+++.|
T Consensus 161 ~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~l 239 (262)
T 3nol_A 161 TITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRL 239 (262)
T ss_dssp EEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEE
T ss_pred EEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEE
Confidence 76532 1 334557776 6654444445889999999999998887632 1356899999998888
Q ss_pred EEEeC
Q psy14440 602 ASAGG 606 (711)
Q Consensus 602 asgs~ 606 (711)
++.+.
T Consensus 240 fVTGK 244 (262)
T 3nol_A 240 FVTGK 244 (262)
T ss_dssp EEEET
T ss_pred EEECC
Confidence 77765
No 259
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.57 E-value=1e-05 Score=92.43 Aligned_cols=228 Identities=11% Similarity=-0.004 Sum_probs=147.2
Q ss_pred cccccCCcEEEEEecCCCeeEEEeecccC----CEEE-EEEcCCCCEEEEEe------CCCeEEEEECCCCeEEEEEecC
Q psy14440 433 IEMECDDILVRIMDERNAETTRTLVGHEG----PVRK-LSFSPDRSLLLSCS------QDNTIRLWSLLLWRCLVVYKGH 501 (711)
Q Consensus 433 l~~~~~d~~i~i~d~~~~~~~~~l~~h~~----~V~~-l~fspdg~~L~s~s------~Dg~V~iwdl~t~~~~~~~~~h 501 (711)
+.+++.++.+..+|..+++.+........ .+++ ... .++ .+++++ .+|.|+.+|..+++.+..+...
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence 55666788899999999998776543210 1111 111 144 455554 3899999999999998877643
Q ss_pred CCC-------------------------------------EE-EEEEcCCCCEEEEEECC----------------CeEE
Q psy14440 502 GHP-------------------------------------VW-DIKFSPHGYYFASAGHD----------------RMAR 527 (711)
Q Consensus 502 ~~~-------------------------------------V~-~v~~sp~g~~l~sgs~D----------------g~i~ 527 (711)
... +| .+++.+....++.++.+ +.|.
T Consensus 202 ~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~ 281 (599)
T 1w6s_A 202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIF 281 (599)
T ss_dssp SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEE
T ss_pred CCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEE
Confidence 211 11 24555666677777655 3899
Q ss_pred EEECCCCceeEEeecCCCCe---------eEEEEc-CCC---CEEEEEEcCCcEEEEECCCCcEEEEeeCCC--------
Q psy14440 528 LWATDSYHPLRLFVGHYSDV---------DCVQFH-PNS---NYVATGSSDRTIRLWDCVTGSHVRLLTGHK-------- 586 (711)
Q Consensus 528 lwd~~~~~~~~~~~~h~~~V---------~~v~~s-p~~---~~latgs~Dg~I~iwD~~~~~~v~~~~~h~-------- 586 (711)
.+|.++++.+..+.....+. .-+... .+| ..++.++.+|.+.++|..+|+.+....-..
T Consensus 282 Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~ 361 (599)
T 1w6s_A 282 GRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSV 361 (599)
T ss_dssp EEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEE
T ss_pred EEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCccccccc
Confidence 99999999887766432211 112222 467 467778899999999999999876654211
Q ss_pred ----C-Ce--------------------------EEEEEecCCCEEEEEe------------------------------
Q psy14440 587 ----A-PV--------------------------YALSFSVCGRFLASAG------------------------------ 605 (711)
Q Consensus 587 ----~-~I--------------------------~~la~spdg~~Lasgs------------------------------ 605 (711)
+ ++ ..++++|+..++++..
T Consensus 362 ~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~ 441 (599)
T 1w6s_A 362 DLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPG 441 (599)
T ss_dssp CTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEEC
T ss_pred ccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccC
Confidence 0 11 2356777766655431
Q ss_pred ---------CCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCCc
Q psy14440 606 ---------GDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDE 663 (711)
Q Consensus 606 ---------~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~ 663 (711)
.+|.|..||+.+|+.+-..... ..+.+-.+...+.+++.++.||.|+.||.++....
T Consensus 442 p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~l 507 (599)
T 1w6s_A 442 PKGDRQNYEGLGQIKAYNAITGDYKWEKMER-FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLL 507 (599)
T ss_dssp TTSBTTTTBCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CcCCcccCCCcCeEEEEECCCCCEEeEecCC-CCccCcceEecCCEEEEECCCCeEEEEECCCCCEE
Confidence 3478999999999988776521 11111122335677888999999999999886654
No 260
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.57 E-value=1.8e-05 Score=82.82 Aligned_cols=190 Identities=13% Similarity=0.043 Sum_probs=125.3
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEec-C-------------------CCCEEEEEEcC-CCCEEEEE
Q psy14440 462 PVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKG-H-------------------GHPVWDIKFSP-HGYYFASA 520 (711)
Q Consensus 462 ~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~-h-------------------~~~V~~v~~sp-~g~~l~sg 520 (711)
...+++|++++++++++..++.|..|+..++.... +.. . ......+++.+ +| .|+++
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g-~l~v~ 97 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVD-FAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN-QLYIV 97 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEE-EEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT-EEEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEE-EecccccccccccccccchhccccCCCCceEEEcCCCC-cEEEE
Confidence 35678899999888888889999999987654332 221 0 12478899997 55 45555
Q ss_pred ECCCeEEEEECCCCceeEEeec-----CCCCeeEEEEcC-CCCEEEEEEc-----------------CCcEEEEECCCCc
Q psy14440 521 GHDRMARLWATDSYHPLRLFVG-----HYSDVDCVQFHP-NSNYVATGSS-----------------DRTIRLWDCVTGS 577 (711)
Q Consensus 521 s~Dg~i~lwd~~~~~~~~~~~~-----h~~~V~~v~~sp-~~~~latgs~-----------------Dg~I~iwD~~~~~ 577 (711)
...+.+..+|.+++. +..+.. .......+++.+ +|+..++... ++.|..||..+++
T Consensus 98 d~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 176 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGH-ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE 176 (322)
T ss_dssp ETTTEEEEECTTCEE-CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred ECCCCEEEEeCCCCE-EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence 555668888877543 222221 123467899999 8987766432 3678899987776
Q ss_pred EEEEeeCCCCCeEEEEEecCCCEEEEE-eCCCcEEEEECCCC---eEEEEeeCCCCCEEEEEEeCCCCEEEEEeC-----
Q psy14440 578 HVRLLTGHKAPVYALSFSVCGRFLASA-GGDGNVHMWDLSNG---HLLTLLTGHTDVVRALCFSRDGNILASSGQ----- 648 (711)
Q Consensus 578 ~v~~~~~h~~~I~~la~spdg~~Lasg-s~Dg~I~iwDl~sg---~~i~~l~~h~~~V~sl~fspdg~~Lasgs~----- 648 (711)
...... .-...+.|+|+++|++|+.+ +.++.|.+|++... .. ..+....+ ...+++.++|+++++...
T Consensus 177 ~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~-~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~ 253 (322)
T 2fp8_A 177 TTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTA-EVLVKIPN-PGNIKRNADGHFWVSSSEELDGN 253 (322)
T ss_dssp EEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCE-EEEEECSS-EEEEEECTTSCEEEEEEEETTSS
T ss_pred EEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCcc-ceEEeCCC-CCCeEECCCCCEEEEecCccccc
Confidence 433322 22345679999999977666 45689999998742 21 11111223 788999999997777654
Q ss_pred -----CCcEEEEeC
Q psy14440 649 -----DCSVKLWDF 657 (711)
Q Consensus 649 -----Dg~V~iWdl 657 (711)
.+.|..+|-
T Consensus 254 ~~~~~~~~v~~~d~ 267 (322)
T 2fp8_A 254 MHGRVDPKGIKFDE 267 (322)
T ss_dssp TTSCEEEEEEEECT
T ss_pred ccCCCccEEEEECC
Confidence 355666664
No 261
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.57 E-value=3.2e-05 Score=88.21 Aligned_cols=244 Identities=14% Similarity=0.100 Sum_probs=154.5
Q ss_pred CCEEEEEeCCCeEEEEeCCCCceeeec------------cCc--ccc------cccccc------CCcEEEEEecCCCee
Q psy14440 399 VSILAVGFSESYIKLWSLVPQKLKAMK------------SSD--QLQ------DIEMEC------DDILVRIMDERNAET 452 (711)
Q Consensus 399 g~~LatG~~dg~I~vWdl~~~~~~~~~------------~~~--~~~------~l~~~~------~d~~i~i~d~~~~~~ 452 (711)
+..|++++.|+.|..+|..++++.-.. ..+ ... .+.++. .++.++.+|..+++.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 456777888888888888766543110 000 011 333333 267899999999888
Q ss_pred EEEeecccCCE-----------------------------------------EEEEEcCCCCEEEEEeC-----------
Q psy14440 453 TRTLVGHEGPV-----------------------------------------RKLSFSPDRSLLLSCSQ----------- 480 (711)
Q Consensus 453 ~~~l~~h~~~V-----------------------------------------~~l~fspdg~~L~s~s~----------- 480 (711)
+.........+ ..++++++...++.++.
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~ 276 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART 276 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence 76543211000 13456666677776653
Q ss_pred ---------C----CeEEEEECCCCeEEEEEec--CC--------CCEEEEEEc-CCCC---EEEEEECCCeEEEEECCC
Q psy14440 481 ---------D----NTIRLWSLLLWRCLVVYKG--HG--------HPVWDIKFS-PHGY---YFASAGHDRMARLWATDS 533 (711)
Q Consensus 481 ---------D----g~V~iwdl~t~~~~~~~~~--h~--------~~V~~v~~s-p~g~---~l~sgs~Dg~i~lwd~~~ 533 (711)
| +.|..+|..+++.+..++. |. .++. +... .+|+ .++.++.+|.++++|.++
T Consensus 277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~t 355 (582)
T 1flg_A 277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSN 355 (582)
T ss_dssp CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTT
T ss_pred cCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCC
Confidence 2 6899999999999988864 21 1222 1221 3564 788899999999999999
Q ss_pred CceeEEeecCCC-------------C--------------------------------eeEEEEcCCCCEEEEEE-----
Q psy14440 534 YHPLRLFVGHYS-------------D--------------------------------VDCVQFHPNSNYVATGS----- 563 (711)
Q Consensus 534 ~~~~~~~~~h~~-------------~--------------------------------V~~v~~sp~~~~latgs----- 563 (711)
++.+..+..... . -..++++|+...+++..
T Consensus 356 G~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~ 435 (582)
T 1flg_A 356 GKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKE 435 (582)
T ss_dssp CCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEE
T ss_pred CCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcce
Confidence 988765543210 0 01345666555544432
Q ss_pred ----------------------------cCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy14440 564 ----------------------------SDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615 (711)
Q Consensus 564 ----------------------------~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl 615 (711)
.+|.|..||+.+|+.+-.+.... .+..-.....|.+++.|+.||.|+.||.
T Consensus 436 ~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~ 514 (582)
T 1flg_A 436 DYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDA 514 (582)
T ss_dssp EEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEET
T ss_pred eeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEEC
Confidence 25789999999999876665322 2222222234678888999999999999
Q ss_pred CCCeEEEEeeCCCCCE-EEEEEeCCCCEEE
Q psy14440 616 SNGHLLTLLTGHTDVV-RALCFSRDGNILA 644 (711)
Q Consensus 616 ~sg~~i~~l~~h~~~V-~sl~fspdg~~La 644 (711)
++|+.+.+++...+.+ .-+.|..+|+..+
T Consensus 515 ~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv 544 (582)
T 1flg_A 515 KSGKELWKFQTGSGIVSPPITWEQDGEQYL 544 (582)
T ss_dssp TTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred CCCCEEEEecCCCCcccCceEEEECCEEEE
Confidence 9999999887544322 2256667887433
No 262
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.56 E-value=3.8e-05 Score=87.64 Aligned_cols=230 Identities=10% Similarity=0.005 Sum_probs=144.9
Q ss_pred ccccccCCcEEEEEecCCCeeEEEeecccC----CEE-EEEEcC---CCC-EEEEEe------CCCeEEEEECCCCeEEE
Q psy14440 432 DIEMECDDILVRIMDERNAETTRTLVGHEG----PVR-KLSFSP---DRS-LLLSCS------QDNTIRLWSLLLWRCLV 496 (711)
Q Consensus 432 ~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~----~V~-~l~fsp---dg~-~L~s~s------~Dg~V~iwdl~t~~~~~ 496 (711)
.+.+++.++.+..+|..+++.......... .+. +..... +++ .+++++ .+|.|+.+|..+++.+.
T Consensus 119 ~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W 198 (582)
T 1flg_A 119 KVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIW 198 (582)
T ss_dssp EEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEE
T ss_pred EEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEe
Confidence 345566788899999999998876653321 111 111111 233 566654 37899999999999887
Q ss_pred EEecCCCC----------------------------------------E-EEEEEcCCCCEEEEEEC-------------
Q psy14440 497 VYKGHGHP----------------------------------------V-WDIKFSPHGYYFASAGH------------- 522 (711)
Q Consensus 497 ~~~~h~~~----------------------------------------V-~~v~~sp~g~~l~sgs~------------- 522 (711)
........ + ..+++.+....++.++.
T Consensus 199 ~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~ 278 (582)
T 1flg_A 199 MRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAK 278 (582)
T ss_dssp EEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCT
T ss_pred ecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccC
Confidence 66432110 0 12455565666666653
Q ss_pred -------C----CeEEEEECCCCceeEEeec--CCC-------CeeEEEEc-CCCC---EEEEEEcCCcEEEEECCCCcE
Q psy14440 523 -------D----RMARLWATDSYHPLRLFVG--HYS-------DVDCVQFH-PNSN---YVATGSSDRTIRLWDCVTGSH 578 (711)
Q Consensus 523 -------D----g~i~lwd~~~~~~~~~~~~--h~~-------~V~~v~~s-p~~~---~latgs~Dg~I~iwD~~~~~~ 578 (711)
| +.|..+|.++++.+..+.. |.. ...-+... .+|+ .++.++.+|.++++|..+|+.
T Consensus 279 gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 358 (582)
T 1flg_A 279 GGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKL 358 (582)
T ss_dssp TSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCE
T ss_pred CCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCE
Confidence 2 6899999999998887753 221 11112221 4664 788899999999999999998
Q ss_pred EEEeeCCC------------CC---------------------------------eEEEEEecCCCEEEEEe--------
Q psy14440 579 VRLLTGHK------------AP---------------------------------VYALSFSVCGRFLASAG-------- 605 (711)
Q Consensus 579 v~~~~~h~------------~~---------------------------------I~~la~spdg~~Lasgs-------- 605 (711)
+..+.... +. -..++++|+...+++..
T Consensus 359 lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~ 438 (582)
T 1flg_A 359 QNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYW 438 (582)
T ss_dssp EEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEE
T ss_pred ecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeee
Confidence 86654321 00 01245666555544432
Q ss_pred -------------------------CCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q psy14440 606 -------------------------GDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKL 660 (711)
Q Consensus 606 -------------------------~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~ 660 (711)
.+|.|..||+.+|+.+-+...+. .+.+-.....+.+++.|+.||.|+.||.++.
T Consensus 439 ~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG 517 (582)
T 1flg_A 439 TEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSG 517 (582)
T ss_dssp ECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTC
T ss_pred cccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCC
Confidence 25889999999999887765332 2222122234678888999999999999875
Q ss_pred CC
Q psy14440 661 SD 662 (711)
Q Consensus 661 ~~ 662 (711)
+.
T Consensus 518 ~~ 519 (582)
T 1flg_A 518 KE 519 (582)
T ss_dssp CE
T ss_pred CE
Confidence 54
No 263
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.55 E-value=4.4e-05 Score=77.31 Aligned_cols=200 Identities=10% Similarity=0.099 Sum_probs=137.0
Q ss_pred EEeecccCCEEEEEEcCCCCEEEE-EeCCCeEEEEECCCCeEEEEEec-CCCCEEEEEEcCCCCEEEEEECCCeEEEEEC
Q psy14440 454 RTLVGHEGPVRKLSFSPDRSLLLS-CSQDNTIRLWSLLLWRCLVVYKG-HGHPVWDIKFSPHGYYFASAGHDRMARLWAT 531 (711)
Q Consensus 454 ~~l~~h~~~V~~l~fspdg~~L~s-~s~Dg~V~iwdl~t~~~~~~~~~-h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~ 531 (711)
+.+.+-.+.+.+++|++++..|++ ...++.|...|.. ++.+..+.- -......|++.+++.++++.-.++.+.++++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 355566678999999998776654 6678889999998 887777742 2356788999988877777667788999987
Q ss_pred CCCce---eEEee------cCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECC---CCcEEEEee-------CCCCCeEEE
Q psy14440 532 DSYHP---LRLFV------GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCV---TGSHVRLLT-------GHKAPVYAL 592 (711)
Q Consensus 532 ~~~~~---~~~~~------~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~---~~~~v~~~~-------~h~~~I~~l 592 (711)
..... +.... ........++|++.++.|+++.......||.+. .+..+..+. .+...+.++
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 65442 22221 134457899999999888888776555565553 112223221 133467899
Q ss_pred EEecC-CCEEEEEeCCCcEEEEECCCCeEEEEeeCCC---------CCEEEEEEeCCCCEEEEEeCCCcEEEEe
Q psy14440 593 SFSVC-GRFLASAGGDGNVHMWDLSNGHLLTLLTGHT---------DVVRALCFSRDGNILASSGQDCSVKLWD 656 (711)
Q Consensus 593 a~spd-g~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~---------~~V~sl~fspdg~~Lasgs~Dg~V~iWd 656 (711)
+++|. |++++.....+.|.++|.. |+.+..+.-.. ..-..|+|.++|++.++ ++-+.++++.
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEE
T ss_pred EEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEE
Confidence 99985 5566666777889999964 66666654221 25689999999985555 6666555543
No 264
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.53 E-value=2.8e-06 Score=98.52 Aligned_cols=199 Identities=9% Similarity=0.033 Sum_probs=116.0
Q ss_pred CCEEEEEEcCCCCEEEEEeC-CCeEEEEECCCCeEEEEEecCC-CCEEEEEEcCCCCEEEEEE-CC-----CeEEEEECC
Q psy14440 461 GPVRKLSFSPDRSLLLSCSQ-DNTIRLWSLLLWRCLVVYKGHG-HPVWDIKFSPHGYYFASAG-HD-----RMARLWATD 532 (711)
Q Consensus 461 ~~V~~l~fspdg~~L~s~s~-Dg~V~iwdl~t~~~~~~~~~h~-~~V~~v~~sp~g~~l~sgs-~D-----g~i~lwd~~ 532 (711)
....++++..+++.++.|+. ++.+.+||..+.+-...-..+. ..-.+++..++|+.++.|+ .+ ..+.+||..
T Consensus 243 ~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 243 MFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS 322 (656)
T ss_dssp CSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred CccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCC
Confidence 33456778889999999884 4589999987654332211111 1123455667899999998 44 578999998
Q ss_pred CCceeEEe----ecCCCCeeEEEEcCCCCEEEEEEcC---------CcEEEEECCCCcEEEEeeCCC---------CCeE
Q psy14440 533 SYHPLRLF----VGHYSDVDCVQFHPNSNYVATGSSD---------RTIRLWDCVTGSHVRLLTGHK---------APVY 590 (711)
Q Consensus 533 ~~~~~~~~----~~h~~~V~~v~~sp~~~~latgs~D---------g~I~iwD~~~~~~v~~~~~h~---------~~I~ 590 (711)
+..-...- ......-....+..++..++.|+.+ ..+..||..+.........+. ..-.
T Consensus 323 t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~ 402 (656)
T 1k3i_A 323 SKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGN 402 (656)
T ss_dssp TTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCE
T ss_pred CCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCc
Confidence 75422210 0000000001122344555555444 356788888776443332221 1234
Q ss_pred EEEEec-CCCEEEEEeCCC-----------cEEEEECCCCeEEEEe--eCCCCCE-EEEEEeCCCCEEEEEeCC------
Q psy14440 591 ALSFSV-CGRFLASAGGDG-----------NVHMWDLSNGHLLTLL--TGHTDVV-RALCFSRDGNILASSGQD------ 649 (711)
Q Consensus 591 ~la~sp-dg~~Lasgs~Dg-----------~I~iwDl~sg~~i~~l--~~h~~~V-~sl~fspdg~~Lasgs~D------ 649 (711)
++.|.. ++++++.|+.++ .|.+||..+.+-.... ..+.... .+.+..++|++++.||.+
T Consensus 403 av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~ 482 (656)
T 1k3i_A 403 AVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFE 482 (656)
T ss_dssp EEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTC
T ss_pred eEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcC
Confidence 555543 788888887543 6888998877654433 2222222 344567899999999865
Q ss_pred -----CcEEEEeCCC
Q psy14440 650 -----CSVKLWDFAK 659 (711)
Q Consensus 650 -----g~V~iWdl~~ 659 (711)
..+.+||..+
T Consensus 483 ~~~~~~~v~~ydp~t 497 (656)
T 1k3i_A 483 DSTPVFTPEIYVPEQ 497 (656)
T ss_dssp CCSBCCCCEEEEGGG
T ss_pred CCCcccceEEEcCCC
Confidence 4678888754
No 265
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.51 E-value=0.00011 Score=86.76 Aligned_cols=264 Identities=9% Similarity=0.007 Sum_probs=161.1
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCc-----------------cccccccccCCcEEEEEecCCC
Q psy14440 388 QQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSD-----------------QLQDIEMECDDILVRIMDERNA 450 (711)
Q Consensus 388 ~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~-----------------~~~~l~~~~~d~~i~i~d~~~~ 450 (711)
..|.++....+|.+.+. +.+ -+.+|+..+.++....... ....+-++...+-+.+++..+.
T Consensus 211 ~~i~~i~~d~~g~lwig-t~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~ 288 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWIG-TSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIATELNGIMILDLQQN 288 (781)
T ss_dssp SSEEEEEECTTCCEEEE-ETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSEEEEEESSSCEEEEETTCC
T ss_pred CceeEEEEcCCCCEEEE-eCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCEEEEeCCCCeEEECCCCC
Confidence 56899999888876654 444 4888988765544332111 1112223333244566666554
Q ss_pred eeEEEee--------------cccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEe---------cCCCCEEE
Q psy14440 451 ETTRTLV--------------GHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYK---------GHGHPVWD 507 (711)
Q Consensus 451 ~~~~~l~--------------~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~---------~h~~~V~~ 507 (711)
....... -....|.++....+|. |..|+.++-|..|+..+........ .....|.+
T Consensus 289 ~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~ 367 (781)
T 3v9f_A 289 QFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSS 367 (781)
T ss_dssp ---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEE
T ss_pred eeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEE
Confidence 4322111 1345799999988875 6667766679999987544322110 12356999
Q ss_pred EEEcCCCCEEEEEECCCeEEEEECCCCceeEEe---ecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEee-
Q psy14440 508 IKFSPHGYYFASAGHDRMARLWATDSYHPLRLF---VGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLT- 583 (711)
Q Consensus 508 v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~---~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~- 583 (711)
+....+|. +..|+.++-+.+|+..++...... ......|.++....+++ |.+|+.++-|..||..+++......
T Consensus 368 i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~ 445 (781)
T 3v9f_A 368 VCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQIIELE 445 (781)
T ss_dssp EEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEEECCST
T ss_pred EEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEEeccC
Confidence 99888775 556676667888987654322111 12345688998887765 4557776779999988776433221
Q ss_pred -CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCC-----CCCEEEEEEeCCCCEEEEEeCCCcEEEEeC
Q psy14440 584 -GHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGH-----TDVVRALCFSRDGNILASSGQDCSVKLWDF 657 (711)
Q Consensus 584 -~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h-----~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl 657 (711)
.....|.++....+|++. .|+. +.|.+||..+++........ ...|.++....+|++.+ |+.++.|..||.
T Consensus 446 ~~~~~~v~~i~~d~~g~lw-igt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~ 522 (781)
T 3v9f_A 446 KNELLDVRVFYEDKNKKIW-IGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTP 522 (781)
T ss_dssp TTCCCCEEEEEECTTSEEE-EEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECT
T ss_pred CCCCCeEEEEEECCCCCEE-EEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeC
Confidence 134679999988888654 4555 56899998877654332222 35799999998888665 444445777876
Q ss_pred CC
Q psy14440 658 AK 659 (711)
Q Consensus 658 ~~ 659 (711)
..
T Consensus 523 ~~ 524 (781)
T 3v9f_A 523 DM 524 (781)
T ss_dssp TC
T ss_pred CC
Confidence 53
No 266
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.51 E-value=9.2e-06 Score=95.74 Aligned_cols=236 Identities=9% Similarity=0.009 Sum_probs=131.8
Q ss_pred ceEEEEEC-CCCCEEEEEeCC-C----eEEEEeCCCC-ceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccC
Q psy14440 389 QVTCAEIS-EDVSILAVGFSE-S----YIKLWSLVPQ-KLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEG 461 (711)
Q Consensus 389 ~V~~l~fs-~dg~~LatG~~d-g----~I~vWdl~~~-~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~ 461 (711)
.+...+|| |||++||.+... | .|+++++.++ +... . .+. .
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~---------------------------~---~~~---~ 221 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA---------------------------D---KVS---G 221 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC---------------------------C---CEE---E
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC---------------------------c---ccc---C
Confidence 57788999 999988865442 2 4777777654 3100 0 000 1
Q ss_pred CEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCe--EEEEEec-CCCCEEEEEEcCCCCEEEEEEC---CCeEEEEE
Q psy14440 462 PVRKLSFSPDRSLLLSCSQD-----NTIRLWSLLLWR--CLVVYKG-HGHPVWDIKFSPHGYYFASAGH---DRMARLWA 530 (711)
Q Consensus 462 ~V~~l~fspdg~~L~s~s~D-----g~V~iwdl~t~~--~~~~~~~-h~~~V~~v~~sp~g~~l~sgs~---Dg~i~lwd 530 (711)
...+++|++||+.|+..+.| ..|.++++.++. ....+.. ......++.|+++|++|+..+. ...|+++|
T Consensus 222 ~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d 301 (751)
T 2xe4_A 222 TNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLD 301 (751)
T ss_dssp ECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEE
T ss_pred ceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEE
Confidence 12467899999988877665 358888887753 2334432 3345678899999998887663 34688889
Q ss_pred CCCCc-ee--EEe-ecCCCCeeEEEEcCCCCEEEEEE-cC----CcEEEEECCCCcEEEE-eeCCCC--CeEEEEEecCC
Q psy14440 531 TDSYH-PL--RLF-VGHYSDVDCVQFHPNSNYVATGS-SD----RTIRLWDCVTGSHVRL-LTGHKA--PVYALSFSVCG 598 (711)
Q Consensus 531 ~~~~~-~~--~~~-~~h~~~V~~v~~sp~~~~latgs-~D----g~I~iwD~~~~~~v~~-~~~h~~--~I~~la~spdg 598 (711)
+.++. .. +.+ .+.......+.|+. |..|+..+ .+ ..|..+|+.++..... +..+.. .+..+++. .+
T Consensus 302 ~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~ 379 (751)
T 2xe4_A 302 LRKGNAHNTLEIVRPREKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SN 379 (751)
T ss_dssp SSSCTTCCCEEESSCCCTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SS
T ss_pred CCCCCCCceeEEeecCCCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CC
Confidence 88752 22 333 33444555666554 55554444 33 2577778765322222 333433 34455554 23
Q ss_pred CEEEEEeCCCc--EEEEEC-------CCCeEEEEeeCCC-CCEEEEEE----eCCCC-EEEEEeCC---CcEEEEeCCC
Q psy14440 599 RFLASAGGDGN--VHMWDL-------SNGHLLTLLTGHT-DVVRALCF----SRDGN-ILASSGQD---CSVKLWDFAK 659 (711)
Q Consensus 599 ~~Lasgs~Dg~--I~iwDl-------~sg~~i~~l~~h~-~~V~sl~f----spdg~-~Lasgs~D---g~V~iWdl~~ 659 (711)
.++++...+|. |.++|+ .+++.+..+.... ..+..+.+ +.++. ++++.+.. +.+..+|+.+
T Consensus 380 ~lv~~~~~~g~~~l~~~dl~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~ 458 (751)
T 2xe4_A 380 YLVVAGRRAGLTRIWTMMADSQDGVFKAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQD 458 (751)
T ss_dssp EEEEEEEETTEEEEEEEECCTTTSCCCTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTT
T ss_pred EEEEEEEeCCEEEEEEEecccccccccCCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCC
Confidence 44556666774 566675 3444133332111 22334433 34554 45554433 3566777654
No 267
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.51 E-value=8.1e-05 Score=79.21 Aligned_cols=197 Identities=11% Similarity=0.003 Sum_probs=130.3
Q ss_pred cCCEEEEEEcCCCCEEEEE-eCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCC-CCEEEEEECCCeEEEEECCCCcee
Q psy14440 460 EGPVRKLSFSPDRSLLLSC-SQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH-GYYFASAGHDRMARLWATDSYHPL 537 (711)
Q Consensus 460 ~~~V~~l~fspdg~~L~s~-s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~-g~~l~sgs~Dg~i~lwd~~~~~~~ 537 (711)
...+.+++|++.+..|+.+ ...+.|..+++..................+++.+. ++.+++-...+.|.+.+.+.....
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 151 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK 151 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceE
Confidence 3457899999766666554 45788999998866544444333344567888874 445556666789999999865544
Q ss_pred EEeecCCCCeeEEEEcCCCCEEEEEE-cC-CcEEEEECCCCcEEEEe-eCCCCCeEEEEEecCCCEEEEEe-CCCcEEEE
Q psy14440 538 RLFVGHYSDVDCVQFHPNSNYVATGS-SD-RTIRLWDCVTGSHVRLL-TGHKAPVYALSFSVCGRFLASAG-GDGNVHMW 613 (711)
Q Consensus 538 ~~~~~h~~~V~~v~~sp~~~~latgs-~D-g~I~iwD~~~~~~v~~~-~~h~~~I~~la~spdg~~Lasgs-~Dg~I~iw 613 (711)
..+.........++++|.+.+|+... .. +.|..+++.... ...+ ...-...+.|++++++..|+.+. ..+.|..+
T Consensus 152 ~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~ 230 (349)
T 3v64_C 152 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERA 230 (349)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC-cEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEE
Confidence 44444556678999999666655544 34 788888876443 3333 23344578999998777666654 45789999
Q ss_pred ECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCC
Q psy14440 614 DLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFA 658 (711)
Q Consensus 614 Dl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~ 658 (711)
|+........+........+|++. ++.++++-...+.|..+|-.
T Consensus 231 ~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~ 274 (349)
T 3v64_C 231 NLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKF 274 (349)
T ss_dssp ETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETT
T ss_pred eCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEEEEcc
Confidence 986543333343334567788884 55566666667788888743
No 268
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.51 E-value=0.0001 Score=76.66 Aligned_cols=202 Identities=13% Similarity=0.063 Sum_probs=126.7
Q ss_pred eeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECC--CeEEE
Q psy14440 451 ETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHD--RMARL 528 (711)
Q Consensus 451 ~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~D--g~i~l 528 (711)
+.+..+... ....+++|+++++.+++...++.|..||.... ....+. .......+++.++|+++++.... ..|..
T Consensus 23 ~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~ 99 (306)
T 2p4o_A 23 KIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVS 99 (306)
T ss_dssp EEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred eEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEE
Confidence 344444332 45789999999987777667899999998753 333333 34568899999999866665443 24666
Q ss_pred EECCCCceeEEeec-CCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcE-EEEee---------CCCCCeEEEEEecC
Q psy14440 529 WATDSYHPLRLFVG-HYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH-VRLLT---------GHKAPVYALSFSVC 597 (711)
Q Consensus 529 wd~~~~~~~~~~~~-h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~-v~~~~---------~h~~~I~~la~spd 597 (711)
++..+++....... .......++..+++..+++...++.|.++|..+++. +.... +.-...+.| +++
T Consensus 100 ~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~d 177 (306)
T 2p4o_A 100 LVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRF 177 (306)
T ss_dssp EECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEE
T ss_pred EcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcC
Confidence 77777765433221 222334555555554455544688999999876532 22111 111234555 788
Q ss_pred CCEEEEEe-CCCcEEEEECCC-CeE--EEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCC
Q psy14440 598 GRFLASAG-GDGNVHMWDLSN-GHL--LTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFA 658 (711)
Q Consensus 598 g~~Lasgs-~Dg~I~iwDl~s-g~~--i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~ 658 (711)
|++|+.+. ..++|..||+.. ++. ...+.. ......++++++|+++++....+.|.++|..
T Consensus 178 g~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 178 GNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp TTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred CCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC
Confidence 88776554 567999999864 331 111111 1234678999999988877778899999854
No 269
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.48 E-value=7.6e-05 Score=88.21 Aligned_cols=265 Identities=9% Similarity=0.004 Sum_probs=161.6
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeecc-------C-----------------ccccccccccCCcEE
Q psy14440 387 RQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKS-------S-----------------DQLQDIEMECDDILV 442 (711)
Q Consensus 387 ~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~-------~-----------------~~~~~l~~~~~d~~i 442 (711)
...|.++....+|.+. .|+..+-|.+++..+..+..... . +....+=++..++-+
T Consensus 257 ~~~i~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl 335 (781)
T 3v9f_A 257 SSYIFSIKQLKDNKLW-IATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGI 335 (781)
T ss_dssp CCCEEEEEECTTSEEE-EEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSCE
T ss_pred CceEEEEEECCCCCEE-EEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCeE
Confidence 3569999998888654 46554458888876654332211 0 001112233334445
Q ss_pred EEEecCCCeeEEEee---------cccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEE---ecCCCCEEEEEE
Q psy14440 443 RIMDERNAETTRTLV---------GHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY---KGHGHPVWDIKF 510 (711)
Q Consensus 443 ~i~d~~~~~~~~~l~---------~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~---~~h~~~V~~v~~ 510 (711)
..++..+........ .....|.++....+|. |..|+.++-|.+|+..++...... ......|+++..
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 414 (781)
T 3v9f_A 336 NFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLK 414 (781)
T ss_dssp EEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEE
T ss_pred EEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEE
Confidence 666655443322211 1235699999887775 556666666999998754432211 123467999998
Q ss_pred cCCCCEEEEEECCCeEEEEECCCCceeEEee--cCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCC---
Q psy14440 511 SPHGYYFASAGHDRMARLWATDSYHPLRLFV--GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH--- 585 (711)
Q Consensus 511 sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~--~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h--- 585 (711)
..+|. |..|+.++-+..++..+++...... .....|.++....+++ |..|+. +-|..||..+++........
T Consensus 415 d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~ 491 (781)
T 3v9f_A 415 DSEGN-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVIHHYDTSNSQ 491 (781)
T ss_dssp CTTSC-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCCEEECTTTSS
T ss_pred CCCCC-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEEecccCcccc
Confidence 87775 4457777778889887665333221 1346788998887765 555665 56899998877654433222
Q ss_pred --CCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEee-C---CCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 586 --KAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLT-G---HTDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 586 --~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~-~---h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
...|.+++...+|++.+ |+.++-|..||..+++.. .+. . ....|.++....+|++.++. .+|.|..||..+
T Consensus 492 ~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~-~~~~~~~l~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d~~~ 568 (781)
T 3v9f_A 492 LLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQLVR-KFNQYEGFCSNTINQIYRSSKGQMWLAT-GEGLVCFPSARN 568 (781)
T ss_dssp CSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCEEE-EECTTTTCSCSCEEEEEECTTSCEEEEE-TTEEEEESCTTT
T ss_pred cccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCeEE-EccCCCCCCCCeeEEEEECCCCCEEEEE-CCCceEEECCCC
Confidence 46799999999887654 444445888998776543 332 1 13568999998888866644 466558888654
No 270
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.48 E-value=0.00026 Score=74.01 Aligned_cols=199 Identities=10% Similarity=-0.051 Sum_probs=127.9
Q ss_pred cCCEEEEEEcCCCCEEEEE-eCCCeEEEEECCC----CeEEEEEecCCCCEEEEEEcCC-CCEEEEEECCCeEEEEECCC
Q psy14440 460 EGPVRKLSFSPDRSLLLSC-SQDNTIRLWSLLL----WRCLVVYKGHGHPVWDIKFSPH-GYYFASAGHDRMARLWATDS 533 (711)
Q Consensus 460 ~~~V~~l~fspdg~~L~s~-s~Dg~V~iwdl~t----~~~~~~~~~h~~~V~~v~~sp~-g~~l~sgs~Dg~i~lwd~~~ 533 (711)
.....+++|++++..|+.+ ..++.|..+++.. ......+.........+++.+. ++.+++-...+.|.+++.+.
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g 108 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 108 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCC
Confidence 4557899999876655554 4568899999875 2222223322344578888864 44555656788999999886
Q ss_pred CceeEEeecCCCCeeEEEEcCCCCEEEEEEcC--CcEEEEECCCCcEEEEe-eCCCCCeEEEEEecCCCEEEEEe-CCCc
Q psy14440 534 YHPLRLFVGHYSDVDCVQFHPNSNYVATGSSD--RTIRLWDCVTGSHVRLL-TGHKAPVYALSFSVCGRFLASAG-GDGN 609 (711)
Q Consensus 534 ~~~~~~~~~h~~~V~~v~~sp~~~~latgs~D--g~I~iwD~~~~~~v~~~-~~h~~~I~~la~spdg~~Lasgs-~Dg~ 609 (711)
......+.........++++|.+.+|+.+... +.|..+++. |.....+ ...-...+.|++++++..|+.+. ..+.
T Consensus 109 ~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~ 187 (316)
T 1ijq_A 109 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 187 (316)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCe
Confidence 54444444445678899999976666655543 688888875 4433433 23345678999998877776665 5579
Q ss_pred EEEEECCCCeEEEEee--CCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q psy14440 610 VHMWDLSNGHLLTLLT--GHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKL 660 (711)
Q Consensus 610 I~iwDl~sg~~i~~l~--~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~ 660 (711)
|..+|+.......... .......+|++. .+.++++-...+.|..+|..+.
T Consensus 188 I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g 239 (316)
T 1ijq_A 188 ISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTG 239 (316)
T ss_dssp EEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTC
T ss_pred EEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCC
Confidence 9999986432222222 223456788885 4566666667788998886543
No 271
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.45 E-value=0.00013 Score=78.63 Aligned_cols=199 Identities=11% Similarity=-0.021 Sum_probs=131.7
Q ss_pred cCCEEEEEEcCCCCEEEEE-eCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCC-CCEEEEEECCCeEEEEECCCCcee
Q psy14440 460 EGPVRKLSFSPDRSLLLSC-SQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH-GYYFASAGHDRMARLWATDSYHPL 537 (711)
Q Consensus 460 ~~~V~~l~fspdg~~L~s~-s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~-g~~l~sgs~Dg~i~lwd~~~~~~~ 537 (711)
...+.+++|++.+..|+.+ ...+.|..+++........+.........+++.+. ++++++-...+.|.+.+++.....
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~ 194 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK 194 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCE
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceE
Confidence 3457899999766655544 45788999999866544444433334567888874 445556566788999888765544
Q ss_pred EEeecCCCCeeEEEEcCCCCEEEEEEc-C-CcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEE
Q psy14440 538 RLFVGHYSDVDCVQFHPNSNYVATGSS-D-RTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAG-GDGNVHMWD 614 (711)
Q Consensus 538 ~~~~~h~~~V~~v~~sp~~~~latgs~-D-g~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs-~Dg~I~iwD 614 (711)
..+.........++++|.+.+|+.... . +.|..+++............-...+.|+|++++..|+.+. ..+.|..+|
T Consensus 195 ~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d 274 (386)
T 3v65_B 195 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 274 (386)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEEC
T ss_pred EeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEe
Confidence 444445567889999987766665543 4 6788888765443333333345578999998776666554 567899999
Q ss_pred CCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 615 LSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 615 l~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
+........+........+|++. ++.++++....+.|..+|..+
T Consensus 275 ~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~ 318 (386)
T 3v65_B 275 LDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFT 318 (386)
T ss_dssp TTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTT
T ss_pred CCCCeeEEEEECCCCCceEEEEE-CCEEEEeeCCCCeEEEEECCC
Confidence 86544333343334567888884 456666666778888888433
No 272
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.45 E-value=1.4e-05 Score=80.82 Aligned_cols=180 Identities=10% Similarity=-0.001 Sum_probs=122.3
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEEEEE
Q psy14440 389 QVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSF 468 (711)
Q Consensus 389 ~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~f 468 (711)
-...+.|+ ++.+..+.+.+|.|+++|+.++++.. .+....----.+++
T Consensus 56 ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~-------------------------------~~l~~~~FgeGit~ 103 (268)
T 3nok_A 56 FTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVW-------------------------------MERLGNIFAEGLAS 103 (268)
T ss_dssp CEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSE-------------------------------EEECTTCCEEEEEE
T ss_pred ccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEe-------------------------------EECCCCcceeEEEE
Confidence 35788887 46777788888889999987665432 11111111123444
Q ss_pred cCCCCEEEE-EeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEeec--CC-
Q psy14440 469 SPDRSLLLS-CSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVG--HY- 544 (711)
Q Consensus 469 spdg~~L~s-~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~--h~- 544 (711)
+++.|+. .-.++.+.+||..+++.+.++... ..-|.+++ ++..|+.+..++.|.++|..+.+.++.+.- +.
T Consensus 104 --~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~-~eGwGLt~--Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~ 178 (268)
T 3nok_A 104 --DGERLYQLTWTEGLLFTWSGMPPQRERTTRYS-GEGWGLCY--WNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQ 178 (268)
T ss_dssp --CSSCEEEEESSSCEEEEEETTTTEEEEEEECS-SCCCCEEE--ETTEEEEECSSSEEEEECTTTCCEEEEEECEETTE
T ss_pred --eCCEEEEEEccCCEEEEEECCcCcEEEEEeCC-CceeEEec--CCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCc
Confidence 3444444 446789999999999999998753 23355554 567777777799999999999988877653 21
Q ss_pred --CCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCC-------------CCCeEEEEEecCCCEEEEEeC
Q psy14440 545 --SDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH-------------KAPVYALSFSVCGRFLASAGG 606 (711)
Q Consensus 545 --~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h-------------~~~I~~la~spdg~~Lasgs~ 606 (711)
..++.+.|. +|...+..-.+..|.+.|..+|+.+..+.-. ..-.+.||++++++.|++.+.
T Consensus 179 ~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 179 PVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp ECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred ccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 234667777 6754444445789999999999998887531 135789999998766665553
No 273
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.44 E-value=5.4e-05 Score=83.04 Aligned_cols=198 Identities=10% Similarity=0.120 Sum_probs=119.3
Q ss_pred ccCCEEEEEEcCCCCEEEEEeCC-C----eEEEEECCC-CeEEEEEecCCCCEEEEEEcC-CCCEEEEEECCCeEEEEEC
Q psy14440 459 HEGPVRKLSFSPDRSLLLSCSQD-N----TIRLWSLLL-WRCLVVYKGHGHPVWDIKFSP-HGYYFASAGHDRMARLWAT 531 (711)
Q Consensus 459 h~~~V~~l~fspdg~~L~s~s~D-g----~V~iwdl~t-~~~~~~~~~h~~~V~~v~~sp-~g~~l~sgs~Dg~i~lwd~ 531 (711)
.......++|++++++|+++... + .+.+++... ......+.. .....++++++ +|..+++-..++.|..++.
T Consensus 177 ~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~ 255 (430)
T 3tc9_A 177 GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDF 255 (430)
T ss_dssp CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEET
T ss_pred CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEEC
Confidence 34567899999999977666542 1 233344321 111122221 23456788999 7777777767889999999
Q ss_pred CCCceeEEee-cCCCCeeEEEEcCCCCEEEEEE-cCCcEEEEECCC--CcE--EEEeeCC---------------CCCeE
Q psy14440 532 DSYHPLRLFV-GHYSDVDCVQFHPNSNYVATGS-SDRTIRLWDCVT--GSH--VRLLTGH---------------KAPVY 590 (711)
Q Consensus 532 ~~~~~~~~~~-~h~~~V~~v~~sp~~~~latgs-~Dg~I~iwD~~~--~~~--v~~~~~h---------------~~~I~ 590 (711)
+.+....... +....-..++|+|++++|+.+. ..+.|..++... +.. +..+.+. -..-.
T Consensus 256 ~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~ 335 (430)
T 3tc9_A 256 TTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPR 335 (430)
T ss_dssp TTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEE
T ss_pred CCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCc
Confidence 8765423222 2224567899999999655554 577899987653 221 2222221 01122
Q ss_pred -EEEEe--------cCCCEEEEEeCCCcEEEEECCCCeEEEEeeC----C-------------CCCEEEEEEeCC-CCEE
Q psy14440 591 -ALSFS--------VCGRFLASAGGDGNVHMWDLSNGHLLTLLTG----H-------------TDVVRALCFSRD-GNIL 643 (711)
Q Consensus 591 -~la~s--------pdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~----h-------------~~~V~sl~fspd-g~~L 643 (711)
.+++. .+|.+.++-...++|+.++ .+|+....... . -...+.|+++++ |.++
T Consensus 336 ~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~ly 414 (430)
T 3tc9_A 336 QGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFF 414 (430)
T ss_dssp EEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEE
T ss_pred ceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEE
Confidence 45553 3455555555677899998 46754433321 0 124789999994 6666
Q ss_pred EEEeCCCcEEEEeCC
Q psy14440 644 ASSGQDCSVKLWDFA 658 (711)
Q Consensus 644 asgs~Dg~V~iWdl~ 658 (711)
++-...+.|+.++++
T Consensus 415 VaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 415 IGDRENRRIRKIGYE 429 (430)
T ss_dssp EEEGGGTEEEEEEEC
T ss_pred EEECCCCeEEEEccC
Confidence 666667789888764
No 274
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.40 E-value=3.2e-06 Score=99.70 Aligned_cols=192 Identities=11% Similarity=0.122 Sum_probs=118.3
Q ss_pred CEEEEEEc-CCCCEEEEEeC-C----CeEEEEECCCC-eEEE-EEecCCCCEEEEEEcCCCCEEEEEECC-----CeEEE
Q psy14440 462 PVRKLSFS-PDRSLLLSCSQ-D----NTIRLWSLLLW-RCLV-VYKGHGHPVWDIKFSPHGYYFASAGHD-----RMARL 528 (711)
Q Consensus 462 ~V~~l~fs-pdg~~L~s~s~-D----g~V~iwdl~t~-~~~~-~~~~h~~~V~~v~~sp~g~~l~sgs~D-----g~i~l 528 (711)
.+.+.+|| |||++|+.+.. + .+|+++|+.++ +.+. .+.. ...++.|+|+|+.|+....| ..|++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 57889999 99998875433 2 35999999988 6321 1111 12357899999888877765 36888
Q ss_pred EECCCCce--eEEeec-CCCCeeEEEEcCCCCEEEEEEc---CCcEEEEECCCCc-EE--EEee-CCCCCeEEEEEecCC
Q psy14440 529 WATDSYHP--LRLFVG-HYSDVDCVQFHPNSNYVATGSS---DRTIRLWDCVTGS-HV--RLLT-GHKAPVYALSFSVCG 598 (711)
Q Consensus 529 wd~~~~~~--~~~~~~-h~~~V~~v~~sp~~~~latgs~---Dg~I~iwD~~~~~-~v--~~~~-~h~~~I~~la~spdg 598 (711)
+++.++.. ...+.. .......+.|+|||++|+..+. ...|+++|+.++. .. +.+. ...+...++.|+.++
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~ 331 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTS 331 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTT
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCC
Confidence 88877642 233332 2234567899999999887763 3468889998762 22 4443 344556666665544
Q ss_pred CEEEEEeCC----CcEEEEECCCCeEEEE-eeCCCC--CEEEEEEeCCCCEEEEEeCCCcEE--EEeC
Q psy14440 599 RFLASAGGD----GNVHMWDLSNGHLLTL-LTGHTD--VVRALCFSRDGNILASSGQDCSVK--LWDF 657 (711)
Q Consensus 599 ~~Lasgs~D----g~I~iwDl~sg~~i~~-l~~h~~--~V~sl~fspdg~~Lasgs~Dg~V~--iWdl 657 (711)
.+++.+..+ ..|..+|+.++..... +..|.. .+.++++. .+.++++...||..+ ++|+
T Consensus 332 ~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 332 HLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred EEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 445555443 3677788765321122 223333 34556654 334566667777644 5554
No 275
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.39 E-value=0.00013 Score=73.10 Aligned_cols=181 Identities=10% Similarity=0.020 Sum_probs=120.4
Q ss_pred CceEEEEECCCCCEEEEEeCC--CeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccC-CEE
Q psy14440 388 QQVTCAEISEDVSILAVGFSE--SYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEG-PVR 464 (711)
Q Consensus 388 ~~V~~l~fs~dg~~LatG~~d--g~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~-~V~ 464 (711)
.-...+.|+. +.+..+.+.+ +.|+++|+.++++. ..+.-... ---
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~-------------------------------~~~~l~~~~fge 68 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRIL-------------------------------QRAEVPPPYFGA 68 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEE-------------------------------EEEECCTTCCEE
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEE-------------------------------EEEeCCCCccee
Confidence 4467899987 5666666654 47888888665543 22221111 112
Q ss_pred EEEEcCCCCEEEEE-eCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEeecC
Q psy14440 465 KLSFSPDRSLLLSC-SQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGH 543 (711)
Q Consensus 465 ~l~fspdg~~L~s~-s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~h 543 (711)
++++ +++.|+.. -.++.+.+||..+.+.+.++.... .=|.+++ ++..++.+..++.|.++|..+.+.++.+.-.
T Consensus 69 Gi~~--~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~-~Gwglt~--dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~ 143 (243)
T 3mbr_X 69 GIVA--WRDRLIQLTWRNHEGFVYDLATLTPRARFRYPG-EGWALTS--DDSHLYMSDGTAVIRKLDPDTLQQVGSIKVT 143 (243)
T ss_dssp EEEE--ETTEEEEEESSSSEEEEEETTTTEEEEEEECSS-CCCEEEE--CSSCEEEECSSSEEEEECTTTCCEEEEEECE
T ss_pred EEEE--eCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCC-CceEEee--CCCEEEEECCCCeEEEEeCCCCeEEEEEEEc
Confidence 2333 24444444 457899999999999999987533 3356654 4555555566899999999999888776532
Q ss_pred C-----CCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCC-------------CCCeEEEEEecCCCEEEEEe
Q psy14440 544 Y-----SDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH-------------KAPVYALSFSVCGRFLASAG 605 (711)
Q Consensus 544 ~-----~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h-------------~~~I~~la~spdg~~Lasgs 605 (711)
. ..++.+.|. +|..++..-.+..|.+.|..+|+.+..+.-. ..-.+.||++++++.|++.+
T Consensus 144 ~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 144 AGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp ETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred cCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 1 345566766 6655544445789999999999998887521 13568999999887777666
Q ss_pred C
Q psy14440 606 G 606 (711)
Q Consensus 606 ~ 606 (711)
.
T Consensus 223 K 223 (243)
T 3mbr_X 223 K 223 (243)
T ss_dssp T
T ss_pred C
Confidence 4
No 276
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.37 E-value=7e-05 Score=82.20 Aligned_cols=195 Identities=12% Similarity=0.095 Sum_probs=120.3
Q ss_pred cCCEEEEEEcCCCCEEEEEeCCC----e-EEEEECCCC-eEEEEEecCCCCEEEEEEcC-CCCEEEEEECCCeEEEEECC
Q psy14440 460 EGPVRKLSFSPDRSLLLSCSQDN----T-IRLWSLLLW-RCLVVYKGHGHPVWDIKFSP-HGYYFASAGHDRMARLWATD 532 (711)
Q Consensus 460 ~~~V~~l~fspdg~~L~s~s~Dg----~-V~iwdl~t~-~~~~~~~~h~~~V~~v~~sp-~g~~l~sgs~Dg~i~lwd~~ 532 (711)
.....+++|+++|+ |+.+...+ . +..++.... .....+. .......+++++ +|.++++-..++.|+.++..
T Consensus 181 ~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~ 258 (433)
T 4hw6_A 181 IGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPA 258 (433)
T ss_dssp CSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTT
T ss_pred CCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECC
Confidence 44578999999999 55444321 1 333332211 1011111 233446688999 77766676678899999998
Q ss_pred CCceeEEe-ec-CCCCeeEEEEcCCCCEEEEEE-cCCcEEEEECC--CCcE--EEEeeCC---------------CCCeE
Q psy14440 533 SYHPLRLF-VG-HYSDVDCVQFHPNSNYVATGS-SDRTIRLWDCV--TGSH--VRLLTGH---------------KAPVY 590 (711)
Q Consensus 533 ~~~~~~~~-~~-h~~~V~~v~~sp~~~~latgs-~Dg~I~iwD~~--~~~~--v~~~~~h---------------~~~I~ 590 (711)
++.....+ .. ....-..++|+|++++|+.+. ..+.|+.+|.. ++.. ...+.+. -....
T Consensus 259 ~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~ 338 (433)
T 4hw6_A 259 TGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPN 338 (433)
T ss_dssp TCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEE
T ss_pred CCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCc
Confidence 77652222 21 222234799999999665554 56789998865 3321 1222221 12356
Q ss_pred EEEE---------ecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCC------------------CCCEEEEEEe-CCCCE
Q psy14440 591 ALSF---------SVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGH------------------TDVVRALCFS-RDGNI 642 (711)
Q Consensus 591 ~la~---------spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h------------------~~~V~sl~fs-pdg~~ 642 (711)
.+++ ..+|.++++-...++|+.++. +|.... +.+. -.....|+++ ++|.+
T Consensus 339 giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~t-~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~l 416 (433)
T 4hw6_A 339 QGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVTT-YAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCF 416 (433)
T ss_dssp EEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEEE-EECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEE
T ss_pred cEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEEE-EEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEE
Confidence 7899 677777777667789999985 665433 3221 1236789999 67777
Q ss_pred EEEEeCCCcEEEEeCC
Q psy14440 643 LASSGQDCSVKLWDFA 658 (711)
Q Consensus 643 Lasgs~Dg~V~iWdl~ 658 (711)
+++-...++|+.++++
T Consensus 417 yVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 417 YIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEEEGGGTEEEEEEEC
T ss_pred EEEeCCCCEEEEEecC
Confidence 7776677889988764
No 277
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.35 E-value=0.00055 Score=74.20 Aligned_cols=201 Identities=10% Similarity=-0.052 Sum_probs=133.4
Q ss_pred ccCCEEEEEEcCCCCEEEEE-eCCCeEEEEECCCC----eEEEEEecCCCCEEEEEEcC-CCCEEEEEECCCeEEEEECC
Q psy14440 459 HEGPVRKLSFSPDRSLLLSC-SQDNTIRLWSLLLW----RCLVVYKGHGHPVWDIKFSP-HGYYFASAGHDRMARLWATD 532 (711)
Q Consensus 459 h~~~V~~l~fspdg~~L~s~-s~Dg~V~iwdl~t~----~~~~~~~~h~~~V~~v~~sp-~g~~l~sgs~Dg~i~lwd~~ 532 (711)
....+.+++|++.+..|+.+ ...+.|+.+++... .....+.........+++.. .++++++-...+.|.+.+++
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC
Confidence 45678899999866666555 45678999998652 23333333445677889987 45556666678899999998
Q ss_pred CCceeEEeecCCCCeeEEEEcCCCCEEEEEEc--CCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEe-CCCc
Q psy14440 533 SYHPLRLFVGHYSDVDCVQFHPNSNYVATGSS--DRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAG-GDGN 609 (711)
Q Consensus 533 ~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~--Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs-~Dg~ 609 (711)
.......+.........|+++|.+.+|+.... .+.|...++........+...-...+.|++++++..|+.+. ..+.
T Consensus 190 g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~ 269 (400)
T 3p5b_L 190 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 269 (400)
T ss_dssp TCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCE
Confidence 76655555555566889999997666666553 37899999865443333343446789999998877777665 4578
Q ss_pred EEEEECCCCeEEEEeeC--CCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q psy14440 610 VHMWDLSNGHLLTLLTG--HTDVVRALCFSRDGNILASSGQDCSVKLWDFAKL 660 (711)
Q Consensus 610 I~iwDl~sg~~i~~l~~--h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~ 660 (711)
|..+|+........... ......+|++. .+.++++-...+.|..+|..+.
T Consensus 270 I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G 321 (400)
T 3p5b_L 270 ISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTG 321 (400)
T ss_dssp EEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSC
T ss_pred EEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCC
Confidence 99999865433333332 23456677774 3456666666788888885443
No 278
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.33 E-value=0.00032 Score=74.53 Aligned_cols=209 Identities=8% Similarity=-0.067 Sum_probs=128.3
Q ss_pred cCCCceEEEEECCCCC-EEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCE
Q psy14440 385 NARQQVTCAEISEDVS-ILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPV 463 (711)
Q Consensus 385 ~h~~~V~~l~fs~dg~-~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V 463 (711)
........++|++.+. ++++-...+.|..+++.+..... .+.......
T Consensus 70 ~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~-------------------------------~~~~~~~~p 118 (349)
T 3v64_C 70 NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEE-------------------------------VVSTGLESP 118 (349)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE-------------------------------EECSSCSCC
T ss_pred cCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceE-------------------------------EEeCCCCCc
Confidence 3345578888886544 44454556777777765432211 111112334
Q ss_pred EEEEEcCCCCEE-EEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCE-EEEEECC-CeEEEEECCCCceeEEe
Q psy14440 464 RKLSFSPDRSLL-LSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYY-FASAGHD-RMARLWATDSYHPLRLF 540 (711)
Q Consensus 464 ~~l~fspdg~~L-~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~-l~sgs~D-g~i~lwd~~~~~~~~~~ 540 (711)
.++++.+.+..| ++-...+.|.+.++..................+++.|.+.. +++-... +.|..++++.......+
T Consensus 119 ~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~ 198 (349)
T 3v64_C 119 GGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA 198 (349)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESC
T ss_pred cEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEE
Confidence 678888755554 45455678999998755444444444456789999985554 4444444 78888888754433333
Q ss_pred ecCCCCeeEEEEcCCCCEEEEEE-cCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCe
Q psy14440 541 VGHYSDVDCVQFHPNSNYVATGS-SDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGH 619 (711)
Q Consensus 541 ~~h~~~V~~v~~sp~~~~latgs-~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~ 619 (711)
.........+++++++..|+.+. ..+.|..+|+........+.........+++. .+..+++-...+.|..+|..+|+
T Consensus 199 ~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 199 DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCC
T ss_pred ECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEEEEccCCC
Confidence 33445678999998766666554 46789999987544333343344566788883 45555555566788888866676
Q ss_pred EEEEee
Q psy14440 620 LLTLLT 625 (711)
Q Consensus 620 ~i~~l~ 625 (711)
.+..+.
T Consensus 278 ~~~~i~ 283 (349)
T 3v64_C 278 NQEIIR 283 (349)
T ss_dssp SCEEEE
T ss_pred ccEEec
Confidence 555554
No 279
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.30 E-value=0.00031 Score=73.70 Aligned_cols=200 Identities=11% Similarity=-0.023 Sum_probs=129.4
Q ss_pred CCEEEEEEcCCCCEEE-EEeCCCeEEEEECCCCeE-EEEEecCCCCEEEEEEcC-CCCEEEEEECCCeEEEEECCCCcee
Q psy14440 461 GPVRKLSFSPDRSLLL-SCSQDNTIRLWSLLLWRC-LVVYKGHGHPVWDIKFSP-HGYYFASAGHDRMARLWATDSYHPL 537 (711)
Q Consensus 461 ~~V~~l~fspdg~~L~-s~s~Dg~V~iwdl~t~~~-~~~~~~h~~~V~~v~~sp-~g~~l~sgs~Dg~i~lwd~~~~~~~ 537 (711)
..+.+++|++.+..|+ +-...+.|..+++..... ...+.........+++.+ .++.+++-...+.|.+++.+.....
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 114 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK 114 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE
Confidence 3467899998655554 445578899999876532 122222233456788886 4555566667789999999865444
Q ss_pred EEeecCCCCeeEEEEcCCCCEEEEEEc--CCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEE
Q psy14440 538 RLFVGHYSDVDCVQFHPNSNYVATGSS--DRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAG-GDGNVHMWD 614 (711)
Q Consensus 538 ~~~~~h~~~V~~v~~sp~~~~latgs~--Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs-~Dg~I~iwD 614 (711)
..+.........++++|.+.+|+.+.. .+.|..+++............-...+.|+|++++..|+.+. ..+.|..+|
T Consensus 115 ~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d 194 (318)
T 3sov_A 115 VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSN 194 (318)
T ss_dssp EEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEc
Confidence 444455567889999997666666653 57888888764332223333334578999999777666654 567899999
Q ss_pred CCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCC
Q psy14440 615 LSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLS 661 (711)
Q Consensus 615 l~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~ 661 (711)
+..........+......++++. .+.++++-...+.|..+|..+..
T Consensus 195 ~dG~~~~~~~~~~~~~P~glav~-~~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 195 LDGTNRQAVVKGSLPHPFALTLF-EDILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp TTSCSCEEEECSCCSCEEEEEEE-TTEEEEEETTTTEEEEEETTTCC
T ss_pred CCCCceEEEecCCCCCceEEEEe-CCEEEEEecCCCeEEEEECCCCC
Confidence 86433322333344566788886 34556666667889999875543
No 280
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.28 E-value=0.00098 Score=69.60 Aligned_cols=183 Identities=13% Similarity=-0.016 Sum_probs=118.8
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCC-EEEEEECCCeEEEEECCC----CceeEEeecCCCCee
Q psy14440 474 LLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGY-YFASAGHDRMARLWATDS----YHPLRLFVGHYSDVD 548 (711)
Q Consensus 474 ~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~-~l~sgs~Dg~i~lwd~~~----~~~~~~~~~h~~~V~ 548 (711)
+|+.+.. ..|+..|+.+.+....+. .......++|++.+. .+++-...+.|..++.+. ......+........
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 80 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 80 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred EEEEECC-CeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC
Confidence 3444443 459999998776655554 345678999998654 555555678999999876 222233333345668
Q ss_pred EEEEcCCCC-EEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCC--CcEEEEECCCCeEEEEe-
Q psy14440 549 CVQFHPNSN-YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGD--GNVHMWDLSNGHLLTLL- 624 (711)
Q Consensus 549 ~v~~sp~~~-~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~D--g~I~iwDl~sg~~i~~l- 624 (711)
.+++++.+. .+++-...+.|.++|.........+...-.....++++|.+.+|+.+... +.|..+++. |+....+
T Consensus 81 glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~ 159 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLV 159 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEE
T ss_pred EEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEE
Confidence 999987544 44555667899999987554433344344567899999976666655543 689888875 4333333
Q ss_pred eCCCCCEEEEEEeCCCCEEEEEe-CCCcEEEEeCCC
Q psy14440 625 TGHTDVVRALCFSRDGNILASSG-QDCSVKLWDFAK 659 (711)
Q Consensus 625 ~~h~~~V~sl~fspdg~~Lasgs-~Dg~V~iWdl~~ 659 (711)
...-...+.|+|++++..|+.+. ..+.|..+|+..
T Consensus 160 ~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 160 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 22345678999998776665554 567899999864
No 281
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.25 E-value=0.00046 Score=69.79 Aligned_cols=199 Identities=13% Similarity=0.114 Sum_probs=127.3
Q ss_pred EecCCCceEEEEECCCCC-EEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEee-ccc
Q psy14440 383 LLNARQQVTCAEISEDVS-ILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLV-GHE 460 (711)
Q Consensus 383 l~~h~~~V~~l~fs~dg~-~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~-~h~ 460 (711)
+-+-.+.+..++|++++. ++|+...++.|...|.. ++ ..+.+. +-.
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~-------------------------------v~~~i~l~g~ 69 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GD-------------------------------LIRTIPLDFV 69 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CC-------------------------------EEEEEECSSC
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CC-------------------------------EEEEEecCCC
Confidence 445557899999999765 55567777777777765 22 222221 112
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeE---EEEEe------cCCCCEEEEEEcCCCCEEEEEECCCeEEEEEC
Q psy14440 461 GPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRC---LVVYK------GHGHPVWDIKFSPHGYYFASAGHDRMARLWAT 531 (711)
Q Consensus 461 ~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~---~~~~~------~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~ 531 (711)
...-++++..++.++++.-.++.+.++++..... +.... ..+.....++|++.++.|+++.......+|.+
T Consensus 70 ~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~ 149 (255)
T 3qqz_A 70 KDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKV 149 (255)
T ss_dssp SSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEE
T ss_pred CChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEE
Confidence 4577888888887767766678899988765432 22222 13445689999998877777766555555555
Q ss_pred C---CCceeEEee-------cCCCCeeEEEEcCCCCE-EEEEEcCCcEEEEECCCCcEEEEeeCCC---------CCeEE
Q psy14440 532 D---SYHPLRLFV-------GHYSDVDCVQFHPNSNY-VATGSSDRTIRLWDCVTGSHVRLLTGHK---------APVYA 591 (711)
Q Consensus 532 ~---~~~~~~~~~-------~h~~~V~~v~~sp~~~~-latgs~Dg~I~iwD~~~~~~v~~~~~h~---------~~I~~ 591 (711)
+ ....+..+. .+..++..++++|.... ++.....+.+.++|.. |+.+..+.-.. ..-..
T Consensus 150 ~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEG 228 (255)
T 3qqz_A 150 NGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEG 228 (255)
T ss_dssp ESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEE
T ss_pred cccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCe
Confidence 3 112233321 24457899999996555 4455556788899965 66655544221 25688
Q ss_pred EEEecCCCEEEEEeCCCcEEEEEC
Q psy14440 592 LSFSVCGRFLASAGGDGNVHMWDL 615 (711)
Q Consensus 592 la~spdg~~Lasgs~Dg~I~iwDl 615 (711)
|+|.++|+..+ .++-+.+++|.-
T Consensus 229 ia~d~~G~lyI-vsE~n~~y~f~~ 251 (255)
T 3qqz_A 229 VAMDASGNIYI-VSEPNRFYRFTP 251 (255)
T ss_dssp EEECTTCCEEE-EETTTEEEEEEC
T ss_pred eEECCCCCEEE-EcCCceEEEEEe
Confidence 99999998544 467777777754
No 282
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.25 E-value=0.00084 Score=70.50 Aligned_cols=261 Identities=11% Similarity=0.085 Sum_probs=145.0
Q ss_pred cCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCce-eeecc-----Ccccccc-------ccccCCcEEEEEecCCCe
Q psy14440 385 NARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKL-KAMKS-----SDQLQDI-------EMECDDILVRIMDERNAE 451 (711)
Q Consensus 385 ~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~-~~~~~-----~~~~~~l-------~~~~~d~~i~i~d~~~~~ 451 (711)
.....+.++.|.+++..+|+| ..|.| ++..+.++. ..+.. ......+ .+....+.+..- .+.++
T Consensus 33 ~~~~~~~~v~~~~~~~~~~~G-~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~g~i~~S-~DgG~ 109 (327)
T 2xbg_A 33 PTTATILDMSFIDRHHGWLVG-VNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEPPIMLHT-TDGGQ 109 (327)
T ss_dssp SCSSCEEEEEESSSSCEEEEE-TTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEETTEEEEE-SSTTS
T ss_pred CCCCcEEEEEECCCCcEEEEc-CCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECCCeEEEE-CCCCC
Confidence 344579999999888888865 46655 333433221 11111 0011111 112223333221 12233
Q ss_pred eEEEee---cccCCEEEEEEcCCCCEEEEEeCCCeEEE-EEC-CCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeE
Q psy14440 452 TTRTLV---GHEGPVRKLSFSPDRSLLLSCSQDNTIRL-WSL-LLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMA 526 (711)
Q Consensus 452 ~~~~l~---~h~~~V~~l~fspdg~~L~s~s~Dg~V~i-wdl-~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i 526 (711)
.-..+. .+.+.++.+.+..++..++++ .+|.|.. .|- .+++.+. ..+...+.++.+.+++.+++++...+..
T Consensus 110 tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S~DgG~tW~~~~--~~~~~~~~~~~~~~~~~~~~~g~~G~~~ 186 (327)
T 2xbg_A 110 SWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRTKDSGKNWQALV--QEAIGVMRNLNRSPSGEYVAVSSRGSFY 186 (327)
T ss_dssp SCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEESSTTSSEEEEE--CSCCCCEEEEEECTTSCEEEEETTSSEE
T ss_pred CceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEEEcCCCCCCEEee--cCCCcceEEEEEcCCCcEEEEECCCcEE
Confidence 222222 234567888887777655554 4564432 221 2344332 3455678999999988887776544444
Q ss_pred EEEEC--CCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeC----CCCCeEEEEEecCCCE
Q psy14440 527 RLWAT--DSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTG----HKAPVYALSFSVCGRF 600 (711)
Q Consensus 527 ~lwd~--~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~----h~~~I~~la~spdg~~ 600 (711)
+-+|- .+.+.+. ......+..+.+.+++..++ ++.+|.+++.+...|+....+.. +...+.++++.+++..
T Consensus 187 ~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~ 263 (327)
T 2xbg_A 187 STWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEV 263 (327)
T ss_dssp EEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCE
T ss_pred EEeCCCCCceeECC--CCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEE
Confidence 44442 2333332 23456788999998887654 45578887775333443333321 2235889999988887
Q ss_pred EEEEeCCCcEEEEECCCCeEEEEeeC---CCCCEEEEEEeCCCCEEEEEeCCCcEEEEeC
Q psy14440 601 LASAGGDGNVHMWDLSNGHLLTLLTG---HTDVVRALCFSRDGNILASSGQDCSVKLWDF 657 (711)
Q Consensus 601 Lasgs~Dg~I~iwDl~sg~~i~~l~~---h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl 657 (711)
++++. +|.| ++....|+.-..+.. +...++++.|..++ .+++++.+|.|.-++-
T Consensus 264 ~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~-~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 264 WLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPD-QGFILGQKGILLRYVT 320 (327)
T ss_dssp EEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETT-EEEEECSTTEEEEECC
T ss_pred EEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCC-ceEEEcCCceEEEEcC
Confidence 77654 6766 445555654444432 23567889897554 4666778998776653
No 283
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.23 E-value=0.0023 Score=69.30 Aligned_cols=225 Identities=10% Similarity=-0.003 Sum_probs=138.0
Q ss_pred ecCCCceEEEEECCCCC-EEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCC
Q psy14440 384 LNARQQVTCAEISEDVS-ILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGP 462 (711)
Q Consensus 384 ~~h~~~V~~l~fs~dg~-~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~ 462 (711)
......+..++|++.+. +.++-...+.|+.+++.+.... ......+......
T Consensus 108 ~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~---------------------------~~~~~~~~~~~~~ 160 (400)
T 3p5b_L 108 IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV---------------------------SSYDTVISRDIQA 160 (400)
T ss_dssp ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC---------------------------------CCCEEEECSSCSC
T ss_pred ccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCC---------------------------CcceEEEeCCCCC
Confidence 34456778888887544 4444445667777776432100 0011112223345
Q ss_pred EEEEEEcCCCCEE-EEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEE-C-CCeEEEEECCCCceeEE
Q psy14440 463 VRKLSFSPDRSLL-LSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAG-H-DRMARLWATDSYHPLRL 539 (711)
Q Consensus 463 V~~l~fspdg~~L-~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs-~-Dg~i~lwd~~~~~~~~~ 539 (711)
..++++...+..| ++-...+.|.+.++........+.........|++.|.+.+|+.+. . .+.|...+++.......
T Consensus 161 p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~ 240 (400)
T 3p5b_L 161 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL 240 (400)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEE
T ss_pred cccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEE
Confidence 7789998755444 4545678899999986655555554455678999998655555544 2 47888888886554444
Q ss_pred eecCCCCeeEEEEcCCCCEEEEEE-cCCcEEEEECCCCcEEEEeeC--CCCCeEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy14440 540 FVGHYSDVDCVQFHPNSNYVATGS-SDRTIRLWDCVTGSHVRLLTG--HKAPVYALSFSVCGRFLASAGGDGNVHMWDLS 616 (711)
Q Consensus 540 ~~~h~~~V~~v~~sp~~~~latgs-~Dg~I~iwD~~~~~~v~~~~~--h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~ 616 (711)
+.........|++++++..|+.+. ..+.|..+|+........... .-.....+++. .+.++++-...+.|..+|..
T Consensus 241 ~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~ 319 (400)
T 3p5b_L 241 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRL 319 (400)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESS
T ss_pred EECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcC
Confidence 444456788999998777766665 467899999865443333332 23445677773 34455555667889999988
Q ss_pred CCeEEEEeeCCCCCEEEEEE
Q psy14440 617 NGHLLTLLTGHTDVVRALCF 636 (711)
Q Consensus 617 sg~~i~~l~~h~~~V~sl~f 636 (711)
+|+.+..+........+|..
T Consensus 320 ~G~~~~~i~~~~~~p~~i~v 339 (400)
T 3p5b_L 320 TGSDVNLLAENLLSPEDMVL 339 (400)
T ss_dssp SCCCCEEEECSCSCEEEEEE
T ss_pred CCCceEEEecCCCCCceEEE
Confidence 88776666544444555544
No 284
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.22 E-value=0.00042 Score=74.68 Aligned_cols=219 Identities=7% Similarity=-0.083 Sum_probs=133.2
Q ss_pred CCCceEEEEECCCC-CEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEE
Q psy14440 386 ARQQVTCAEISEDV-SILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVR 464 (711)
Q Consensus 386 h~~~V~~l~fs~dg-~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~ 464 (711)
.......++|++.+ .++++-...+.|..|++.+..... .+........
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~-------------------------------~~~~~~~~p~ 162 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEE-------------------------------VVSTGLESPG 162 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEE-------------------------------EECSSCSCCC
T ss_pred CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEE-------------------------------EEeCCCCCcc
Confidence 34557788888644 444455556777777765432211 1111122346
Q ss_pred EEEEcCCCCEE-EEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEE-CC-CeEEEEECCCCceeEEee
Q psy14440 465 KLSFSPDRSLL-LSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAG-HD-RMARLWATDSYHPLRLFV 541 (711)
Q Consensus 465 ~l~fspdg~~L-~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs-~D-g~i~lwd~~~~~~~~~~~ 541 (711)
++++.+.+..| ++-...+.|.+.++........+.........+++.|.+..+..+. .. +.|..++.+.........
T Consensus 163 glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~ 242 (386)
T 3v65_B 163 GLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD 242 (386)
T ss_dssp CEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC
T ss_pred EEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEE
Confidence 77888755554 4445567888888875444444444445678999998665554444 44 688888887654444444
Q ss_pred cCCCCeeEEEEcCCCCEEEEEE-cCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeE
Q psy14440 542 GHYSDVDCVQFHPNSNYVATGS-SDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHL 620 (711)
Q Consensus 542 ~h~~~V~~v~~sp~~~~latgs-~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~ 620 (711)
........|+|++++..|+.+. ..+.|..+|+........+.........|++. .+..+++....+.|..+|..+|+.
T Consensus 243 ~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~ 321 (386)
T 3v65_B 243 THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKN 321 (386)
T ss_dssp SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCS
T ss_pred CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE-CCEEEEeeCCCCeEEEEECCCCcc
Confidence 4455678999998666665554 46789999986544333344344566788883 455555666678899998777776
Q ss_pred EEEeeCCCCCEEEEEE
Q psy14440 621 LTLLTGHTDVVRALCF 636 (711)
Q Consensus 621 i~~l~~h~~~V~sl~f 636 (711)
+..+........+|++
T Consensus 322 ~~~i~~~~~~p~gi~v 337 (386)
T 3v65_B 322 QEIIRNKLHFPMDIHT 337 (386)
T ss_dssp CEEEECSCSCCCCEEE
T ss_pred eEEEccCCCCCceEEE
Confidence 6655533333344444
No 285
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.17 E-value=0.00033 Score=73.70 Aligned_cols=184 Identities=16% Similarity=0.220 Sum_probs=126.0
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCC----CC---E-EEEEEC--CCeEEEEECC-CCceeEE
Q psy14440 471 DRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH----GY---Y-FASAGH--DRMARLWATD-SYHPLRL 539 (711)
Q Consensus 471 dg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~----g~---~-l~sgs~--Dg~i~lwd~~-~~~~~~~ 539 (711)
....++.....+-+.+||+ +++.+..+.. +.+..+..-+. |+ + +++.-. +++|++|+++ ....+..
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~ 115 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS 115 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceee
Confidence 4456666677788999999 7888888763 55677766552 22 2 233334 5899999774 2223554
Q ss_pred eec------C-CCCeeEEEE--cCC-CC-EEEEEEcCCcEEEEECC-------CCcEEEEeeCCCCCeEEEEEecCCCEE
Q psy14440 540 FVG------H-YSDVDCVQF--HPN-SN-YVATGSSDRTIRLWDCV-------TGSHVRLLTGHKAPVYALSFSVCGRFL 601 (711)
Q Consensus 540 ~~~------h-~~~V~~v~~--sp~-~~-~latgs~Dg~I~iwD~~-------~~~~v~~~~~h~~~I~~la~spdg~~L 601 (711)
+.. . ...+..+|+ ++. +. |+++...+|.+..|++. +++.++.|.. .+.+..++..+...+|
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~L 194 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRL 194 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeE
Confidence 422 1 156777787 664 43 68888889999999882 3466788774 4578888899988999
Q ss_pred EEEeCCCcEEEEECC-----CCeEEEEee-CCC-CCEEEEEEe--CCCC-EEEEEe-CCCcEEEEeCC
Q psy14440 602 ASAGGDGNVHMWDLS-----NGHLLTLLT-GHT-DVVRALCFS--RDGN-ILASSG-QDCSVKLWDFA 658 (711)
Q Consensus 602 asgs~Dg~I~iwDl~-----sg~~i~~l~-~h~-~~V~sl~fs--pdg~-~Lasgs-~Dg~V~iWdl~ 658 (711)
+.+-++..|..+|.. +++.+..+. ++- ..+..|++- ++|+ +|++++ .++++.|||..
T Consensus 195 yv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 195 YIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred EEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 999998777777754 456776653 232 468888884 4555 555555 67899999996
No 286
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.10 E-value=0.00083 Score=74.33 Aligned_cols=196 Identities=10% Similarity=0.092 Sum_probs=121.7
Q ss_pred CCEEEEEE-------cCCCCEEEEEeCCC-------eEEEEECCC-C--------eEEEEEecCCCCEEEEEEcC-CCCE
Q psy14440 461 GPVRKLSF-------SPDRSLLLSCSQDN-------TIRLWSLLL-W--------RCLVVYKGHGHPVWDIKFSP-HGYY 516 (711)
Q Consensus 461 ~~V~~l~f-------spdg~~L~s~s~Dg-------~V~iwdl~t-~--------~~~~~~~~h~~~V~~v~~sp-~g~~ 516 (711)
.....++| ++++++|+++...+ .|.+++... + ..+..+. ....+++++ ++.+
T Consensus 186 ~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~----~p~giavdp~~g~L 261 (496)
T 3kya_A 186 NRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYK----QCNGATIHPINGEL 261 (496)
T ss_dssp SBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEES----CCCCEEECTTTCCE
T ss_pred CCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCC----CceEEEEcCCCCeE
Confidence 35789999 99999777776554 256665333 1 2222222 234678899 5566
Q ss_pred EEEEECCCeEEEEECC-------CCce-----------eEE-ee-cCCCCeeEEEEcCCCCEEEEE-EcCCcEEEEEC--
Q psy14440 517 FASAGHDRMARLWATD-------SYHP-----------LRL-FV-GHYSDVDCVQFHPNSNYVATG-SSDRTIRLWDC-- 573 (711)
Q Consensus 517 l~sgs~Dg~i~lwd~~-------~~~~-----------~~~-~~-~h~~~V~~v~~sp~~~~latg-s~Dg~I~iwD~-- 573 (711)
+++...++.|..+|++ ++.. ... +. +....-..|+|+|++++|+.+ +....|+.+|.
T Consensus 262 Yvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 262 YFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp EEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred EEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 6667788899999987 4443 111 21 223446799999999965555 45678888654
Q ss_pred CCCcE--EEEeeCC---C------------CCeE-EEEEe-------cCCCEEEEEeCCCcEEEEECCCCeEEEEeeCC-
Q psy14440 574 VTGSH--VRLLTGH---K------------APVY-ALSFS-------VCGRFLASAGGDGNVHMWDLSNGHLLTLLTGH- 627 (711)
Q Consensus 574 ~~~~~--v~~~~~h---~------------~~I~-~la~s-------pdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h- 627 (711)
.++.. ...+.+. . .... .++.. .+|.++++-...++|+.++ .+|.. .++.+.
T Consensus 342 ~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~v-~TiaG~g 419 (496)
T 3kya_A 342 IKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGIV-STYAGRG 419 (496)
T ss_dssp TTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCBE-EEEEESC
T ss_pred CcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCCE-EEEeccc
Confidence 33321 1233221 1 1233 45554 4566666666778999999 56743 344321
Q ss_pred -----------------------CCCEEEEEEeCC-CCEEEEEeCCCcEEEEeCCCCCC
Q psy14440 628 -----------------------TDVVRALCFSRD-GNILASSGQDCSVKLWDFAKLSD 662 (711)
Q Consensus 628 -----------------------~~~V~sl~fspd-g~~Lasgs~Dg~V~iWdl~~~~~ 662 (711)
-.....|+++++ |.++++=....+||.+++.....
T Consensus 420 ~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~ 478 (496)
T 3kya_A 420 ASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEEN 478 (496)
T ss_dssp TTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC-
T ss_pred ccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCcc
Confidence 123678999997 77777767788999999876443
No 287
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.08 E-value=0.00032 Score=76.85 Aligned_cols=193 Identities=13% Similarity=0.139 Sum_probs=121.0
Q ss_pred CEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEEC-CC----eEEEEECCCCc
Q psy14440 462 PVRKLSFSP-DRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGH-DR----MARLWATDSYH 535 (711)
Q Consensus 462 ~V~~l~fsp-dg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~-Dg----~i~lwd~~~~~ 535 (711)
....++|+| ++..|+++...+.|+.+|+.++....... .......++|+++|++++++.. ++ .+.+++.+...
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCce
Confidence 457899998 46667776665889999998776554443 4566889999999996665553 22 23334433221
Q ss_pred e-eEEeecCCCCeeEEEEcC-CCCEEEEEEcCCcEEEEECCCCcEEEEeeC-CCCCeEEEEEecCCCEEEEE-eCCCcEE
Q psy14440 536 P-LRLFVGHYSDVDCVQFHP-NSNYVATGSSDRTIRLWDCVTGSHVRLLTG-HKAPVYALSFSVCGRFLASA-GGDGNVH 611 (711)
Q Consensus 536 ~-~~~~~~h~~~V~~v~~sp-~~~~latgs~Dg~I~iwD~~~~~~v~~~~~-h~~~I~~la~spdg~~Lasg-s~Dg~I~ 611 (711)
. .+.+. .......++++| ++..+++-..++.|..||..++.....+.. .......++|+++|++|+.+ ...+.|.
T Consensus 217 ~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~ 295 (430)
T 3tc9_A 217 KVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYIL 295 (430)
T ss_dssp CSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEE
T ss_pred eeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEE
Confidence 1 12332 234567889999 677666666788999999887764333322 22457889999999965555 4567899
Q ss_pred EEECCC--CeE--EEEeeCC---------------CCCEE-EEEEe--------CCCCEEEEEeCCCcEEEEe
Q psy14440 612 MWDLSN--GHL--LTLLTGH---------------TDVVR-ALCFS--------RDGNILASSGQDCSVKLWD 656 (711)
Q Consensus 612 iwDl~s--g~~--i~~l~~h---------------~~~V~-sl~fs--------pdg~~Lasgs~Dg~V~iWd 656 (711)
.++... ++. +..+.+. -.... .++.. .+|.++++-...++|+.++
T Consensus 296 ~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~ 368 (430)
T 3tc9_A 296 RSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT 368 (430)
T ss_dssp EEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC
T ss_pred EEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC
Confidence 987643 332 1222211 01123 45553 3466666656677888887
No 288
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.07 E-value=0.0012 Score=69.27 Aligned_cols=163 Identities=10% Similarity=-0.034 Sum_probs=105.3
Q ss_pred CEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEE--CCCeEEEEECCCCceeE
Q psy14440 462 PVRKLSFSPDRSLL-LSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAG--HDRMARLWATDSYHPLR 538 (711)
Q Consensus 462 ~V~~l~fspdg~~L-~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs--~Dg~i~lwd~~~~~~~~ 538 (711)
...++++.+.+..| ++-...+.|.++++..................+++.|.+.+++.+. ..+.|...+.+......
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~ 159 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFI 159 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEE
Confidence 45678888755544 4545677899999875443333334455678999998655555554 35788888887544333
Q ss_pred EeecCCCCeeEEEEcCCCCEEEEEE-cCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy14440 539 LFVGHYSDVDCVQFHPNSNYVATGS-SDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617 (711)
Q Consensus 539 ~~~~h~~~V~~v~~sp~~~~latgs-~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~s 617 (711)
........-..+++++++..|+.+. ..+.|..+|+........+.+.......+++.. +.++++-...+.|..+|..+
T Consensus 160 ~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~ 238 (318)
T 3sov_A 160 IINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYT 238 (318)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTT
T ss_pred EEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCC
Confidence 3333445678999999766665554 567899999864433333333445667788763 44555555678899999877
Q ss_pred CeEEEEee
Q psy14440 618 GHLLTLLT 625 (711)
Q Consensus 618 g~~i~~l~ 625 (711)
|+.+..+.
T Consensus 239 G~~~~~i~ 246 (318)
T 3sov_A 239 GEGLREIH 246 (318)
T ss_dssp CCSCEEEE
T ss_pred CCceEEEe
Confidence 77655554
No 289
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.02 E-value=0.00041 Score=76.02 Aligned_cols=194 Identities=14% Similarity=0.134 Sum_probs=122.9
Q ss_pred CEEEEEEcCC--CCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECC---Ce-EEEEECCCCc
Q psy14440 462 PVRKLSFSPD--RSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHD---RM-ARLWATDSYH 535 (711)
Q Consensus 462 ~V~~l~fspd--g~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~D---g~-i~lwd~~~~~ 535 (711)
...+++|+++ +..|+.+...+.|+.+|..++...... .......+++|+++|+++++.... .. +...+.....
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence 4568999984 455666655588999999877765543 345568899999999954444321 22 3333322221
Q ss_pred e-eEEeecCCCCeeEEEEcC-CCCEEEEEEcCCcEEEEECCCCcEEEEe-e-CCCCCeEEEEEecCCCEEEEEe-CCCcE
Q psy14440 536 P-LRLFVGHYSDVDCVQFHP-NSNYVATGSSDRTIRLWDCVTGSHVRLL-T-GHKAPVYALSFSVCGRFLASAG-GDGNV 610 (711)
Q Consensus 536 ~-~~~~~~h~~~V~~v~~sp-~~~~latgs~Dg~I~iwD~~~~~~v~~~-~-~h~~~I~~la~spdg~~Lasgs-~Dg~I 610 (711)
. ...+. .......+++++ +++.+++-..++.|+.+|..++.....+ . +....-..++|+++|++|+.+. ..++|
T Consensus 219 ~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I 297 (433)
T 4hw6_A 219 TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCI 297 (433)
T ss_dssp CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEE
T ss_pred ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEE
Confidence 1 11222 334567789999 6766666667788999999878763332 2 2223345799999999666554 56789
Q ss_pred EEEECC--CCeE--EEEeeCC---------------CCCEEEEEE---------eCCCCEEEEEeCCCcEEEEeC
Q psy14440 611 HMWDLS--NGHL--LTLLTGH---------------TDVVRALCF---------SRDGNILASSGQDCSVKLWDF 657 (711)
Q Consensus 611 ~iwDl~--sg~~--i~~l~~h---------------~~~V~sl~f---------spdg~~Lasgs~Dg~V~iWdl 657 (711)
+.++.. ++.. ...+.+. -.....+++ ..+|+++++-...++|+.++.
T Consensus 298 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 298 YRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp EEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred EEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence 998865 3321 1122211 123677999 677777777777788999874
No 290
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.01 E-value=4.5e-05 Score=88.37 Aligned_cols=227 Identities=8% Similarity=-0.013 Sum_probs=127.6
Q ss_pred EEEEECCCCCEEEEEeC-CCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEEEEEc
Q psy14440 391 TCAEISEDVSILAVGFS-ESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFS 469 (711)
Q Consensus 391 ~~l~fs~dg~~LatG~~-dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~fs 469 (711)
.++++..+|+++++|+. ++.+.+||..+.+-..+. .+.... .-.+++..
T Consensus 246 ~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~-----------------------------~~~~~R-~~~s~~~~ 295 (656)
T 1k3i_A 246 PGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGP-----------------------------DMQVAR-GYQSSATM 295 (656)
T ss_dssp CEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECC-----------------------------CCSSCC-SSCEEEEC
T ss_pred ccccCCCCCCEEEeCCCCCCceEEecCcCCceeECC-----------------------------CCCccc-cccceEEe
Confidence 34677788888888874 446777776543221110 011111 11244555
Q ss_pred CCCCEEEEEe-CC-----CeEEEEECCCCeEEEEEecCC-CCE----EEEEEcCCCCEEEEEECC---------CeEEEE
Q psy14440 470 PDRSLLLSCS-QD-----NTIRLWSLLLWRCLVVYKGHG-HPV----WDIKFSPHGYYFASAGHD---------RMARLW 529 (711)
Q Consensus 470 pdg~~L~s~s-~D-----g~V~iwdl~t~~~~~~~~~h~-~~V----~~v~~sp~g~~l~sgs~D---------g~i~lw 529 (711)
++++.++.|+ .+ ..+.+||..+.+-... .... .+. ....+..+++.++.|+.+ ..+..|
T Consensus 296 ~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~-~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~y 374 (656)
T 1k3i_A 296 SDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSL-PNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWY 374 (656)
T ss_dssp TTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEE-TTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEE
T ss_pred cCCeEEEEeCcccCCcccccceEeCCCCCcceeC-CCccccccccccccceeecCCceEEEECCCCcEEEecCccceeee
Confidence 7889888888 34 5699999977653322 1000 000 001122345555566544 356788
Q ss_pred ECCCCceeEEeecCC---------CCeeEEEEcC-CCCEEEEEEcCC-----------cEEEEECCCCcEEEEe--eCCC
Q psy14440 530 ATDSYHPLRLFVGHY---------SDVDCVQFHP-NSNYVATGSSDR-----------TIRLWDCVTGSHVRLL--TGHK 586 (711)
Q Consensus 530 d~~~~~~~~~~~~h~---------~~V~~v~~sp-~~~~latgs~Dg-----------~I~iwD~~~~~~v~~~--~~h~ 586 (711)
|..+..-......+. ..-.++.|.. +++.+++|+.++ .|.+||..+..-.... ..+.
T Consensus 375 d~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~ 454 (656)
T 1k3i_A 375 YTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYF 454 (656)
T ss_dssp ECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSS
T ss_pred ecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCC
Confidence 887765333222111 1224455543 677788887532 6788888777654443 2222
Q ss_pred CCe-EEEEEecCCCEEEEEeCC-----------CcEEEEECCCCeEEEE--eeCCCCCEEEEEEeCCCCEEEEEeC
Q psy14440 587 APV-YALSFSVCGRFLASAGGD-----------GNVHMWDLSNGHLLTL--LTGHTDVVRALCFSRDGNILASSGQ 648 (711)
Q Consensus 587 ~~I-~~la~spdg~~Lasgs~D-----------g~I~iwDl~sg~~i~~--l~~h~~~V~sl~fspdg~~Lasgs~ 648 (711)
... .+.+..++|++++.|+.+ ..+.+||..+.+-... +...........+.++|++++.||.
T Consensus 455 ~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 455 ARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 222 344566899999999854 4689999987664321 2222222334556789999999985
No 291
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.97 E-value=0.0038 Score=73.38 Aligned_cols=217 Identities=12% Similarity=-0.035 Sum_probs=135.3
Q ss_pred EEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEE-EEeCCCeEEEEECCCC----eEEEEEecCCCCEEEEEEcCCC-C
Q psy14440 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLL-SCSQDNTIRLWSLLLW----RCLVVYKGHGHPVWDIKFSPHG-Y 515 (711)
Q Consensus 442 i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~-s~s~Dg~V~iwdl~t~----~~~~~~~~h~~~V~~v~~sp~g-~ 515 (711)
|+.++........ +......+.+|+|+..+..|+ +-...+.|+.+++... .....+.........|++...+ +
T Consensus 406 Ir~i~l~~~~~~~-l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~ 484 (791)
T 3m0c_C 406 VRKMTLDRSEYTS-LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSN 484 (791)
T ss_dssp EEEECTTSCCCEE-EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTE
T ss_pred eeEeeccCCccee-eecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCc
Confidence 4444444333322 333456678999998655555 4455678999998752 2233344344556678888766 4
Q ss_pred EEEEEECCCeEEEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEc-C-CcEEEEECCCCcEEEEeeCCCCCeEEEE
Q psy14440 516 YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSS-D-RTIRLWDCVTGSHVRLLTGHKAPVYALS 593 (711)
Q Consensus 516 ~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~-D-g~I~iwD~~~~~~v~~~~~h~~~I~~la 593 (711)
++++-...+.|.+.+++.......+.........|+++|.+.+|+.... . +.|.+.++........+...-...+.|+
T Consensus 485 LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLa 564 (791)
T 3m0c_C 485 IYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGIT 564 (791)
T ss_dssp EEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEE
T ss_pred EEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEE
Confidence 5556667889999999866554455455667899999997666666553 3 6799999865444344444446789999
Q ss_pred EecCCCEEEEEe-CCCcEEEEECCCCeEEEEeeC--CCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q psy14440 594 FSVCGRFLASAG-GDGNVHMWDLSNGHLLTLLTG--HTDVVRALCFSRDGNILASSGQDCSVKLWDFAKL 660 (711)
Q Consensus 594 ~spdg~~Lasgs-~Dg~I~iwDl~sg~~i~~l~~--h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~ 660 (711)
+++.+..|+.+. ..+.|..+|+........+.. ......+|++.. +.++++-...+.|...|..+.
T Consensus 565 vD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 565 LDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTG 633 (791)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTC
T ss_pred EecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCC
Confidence 998777766664 456899999865444333333 223455777643 344444445677777775443
No 292
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.97 E-value=0.0012 Score=68.76 Aligned_cols=196 Identities=10% Similarity=0.070 Sum_probs=129.2
Q ss_pred CEEEEEEcCCCCEEEEEe-CCCeEEEEECCCCeEEEEEecC-------CCCEEEEEE---cCCCCEEEEEE---------
Q psy14440 462 PVRKLSFSPDRSLLLSCS-QDNTIRLWSLLLWRCLVVYKGH-------GHPVWDIKF---SPHGYYFASAG--------- 521 (711)
Q Consensus 462 ~V~~l~fspdg~~L~s~s-~Dg~V~iwdl~t~~~~~~~~~h-------~~~V~~v~~---sp~g~~l~sgs--------- 521 (711)
---+++|......|+.++ ..++|..||...+......-.. ...+..|.| .++++++++..
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTS
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccc
Confidence 345788987666666665 7899999999765444332211 113689999 68877777544
Q ss_pred ----CCCeEEEEECC---CCceeEEeec-------------CCCCeeEEEEcCCCCEEEEEEcC-CcEEEEECCCCcEEE
Q psy14440 522 ----HDRMARLWATD---SYHPLRLFVG-------------HYSDVDCVQFHPNSNYVATGSSD-RTIRLWDCVTGSHVR 580 (711)
Q Consensus 522 ----~Dg~i~lwd~~---~~~~~~~~~~-------------h~~~V~~v~~sp~~~~latgs~D-g~I~iwD~~~~~~v~ 580 (711)
.++.+..||+. +++.+..... -......++..++|+..++++.. +.|..++.... .+.
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~ 172 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVS 172 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEE
T ss_pred cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEe
Confidence 26789999999 7776655431 12347899999999999999988 88888876533 333
Q ss_pred Eee------CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeE--EEEee-CC---CCCEEEE-EEeCCCCE-EEEE
Q psy14440 581 LLT------GHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHL--LTLLT-GH---TDVVRAL-CFSRDGNI-LASS 646 (711)
Q Consensus 581 ~~~------~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~--i~~l~-~h---~~~V~sl-~fspdg~~-Lasg 646 (711)
.+. ......+.|+++|+|+.|++...+|.|..+|+.+... +..-. +. ......| .--.+|+. |++.
T Consensus 173 ~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~ 252 (334)
T 2p9w_A 173 TFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGA 252 (334)
T ss_dssp EEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEE
T ss_pred eeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEc
Confidence 321 1223467999999999999887799999999885433 22110 22 1233443 33347887 5555
Q ss_pred eCCCcEEEEeCC
Q psy14440 647 GQDCSVKLWDFA 658 (711)
Q Consensus 647 s~Dg~V~iWdl~ 658 (711)
+..+.+.+.+-.
T Consensus 253 ~~~~~~~l~S~D 264 (334)
T 2p9w_A 253 RAPYAISFRSWD 264 (334)
T ss_dssp ETTEEEEEECSS
T ss_pred CCCCEEEEECCC
Confidence 566666665543
No 293
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.92 E-value=0.0039 Score=73.29 Aligned_cols=164 Identities=11% Similarity=-0.016 Sum_probs=108.3
Q ss_pred cCCEEEEEEcCCCCEEEEE-eCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEE-CC-CeEEEEECCCCce
Q psy14440 460 EGPVRKLSFSPDRSLLLSC-SQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAG-HD-RMARLWATDSYHP 536 (711)
Q Consensus 460 ~~~V~~l~fspdg~~L~s~-s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs-~D-g~i~lwd~~~~~~ 536 (711)
.....+|++...++.|+.+ ...+.|.+.++........+.........|++.+.+.+|+.+. .. +.|...+++....
T Consensus 470 l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~ 549 (791)
T 3m0c_C 470 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI 549 (791)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE
T ss_pred CCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce
Confidence 3456788998877655544 5578899999986555444544556688999999755555544 33 7888889886655
Q ss_pred eEEeecCCCCeeEEEEcCCCCEEEEEE-cCCcEEEEECCCCcEEEEeeCC--CCCeEEEEEecCCCEEEEE-eCCCcEEE
Q psy14440 537 LRLFVGHYSDVDCVQFHPNSNYVATGS-SDRTIRLWDCVTGSHVRLLTGH--KAPVYALSFSVCGRFLASA-GGDGNVHM 612 (711)
Q Consensus 537 ~~~~~~h~~~V~~v~~sp~~~~latgs-~Dg~I~iwD~~~~~~v~~~~~h--~~~I~~la~spdg~~Lasg-s~Dg~I~i 612 (711)
...+.........|++++.+..|+.+. ..+.|..+|+........+... -....+|++. +.+|+.+ ...+.|..
T Consensus 550 ~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~~ 627 (791)
T 3m0c_C 550 YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFS 627 (791)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEE
T ss_pred EEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEEE
Confidence 555555556788999998766666654 4568999998655444443332 2345567664 3345444 45678888
Q ss_pred EECCCCeEEEEee
Q psy14440 613 WDLSNGHLLTLLT 625 (711)
Q Consensus 613 wDl~sg~~i~~l~ 625 (711)
.|..+|+.+..+.
T Consensus 628 ~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 628 ANRLTGSDVNLLA 640 (791)
T ss_dssp EETTTCCCCEEEE
T ss_pred EeCCCCcceEEee
Confidence 8887776555553
No 294
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.85 E-value=0.0034 Score=71.93 Aligned_cols=201 Identities=11% Similarity=-0.018 Sum_probs=123.9
Q ss_pred ccCCEEEEEEcCCCCEEEEEe-CCCeEEEEECCCCeE-EEEEecCCCCEEEEEEcCCCC-EEEEEECCCeEEEEECCCCc
Q psy14440 459 HEGPVRKLSFSPDRSLLLSCS-QDNTIRLWSLLLWRC-LVVYKGHGHPVWDIKFSPHGY-YFASAGHDRMARLWATDSYH 535 (711)
Q Consensus 459 h~~~V~~l~fspdg~~L~s~s-~Dg~V~iwdl~t~~~-~~~~~~h~~~V~~v~~sp~g~-~l~sgs~Dg~i~lwd~~~~~ 535 (711)
.-+...+++|++.+..|+.+. ..+.|..+++..... ...+.........+++...+. .+++-...+.|.+.+.+...
T Consensus 38 ~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~ 117 (619)
T 3s94_A 38 GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL 117 (619)
T ss_dssp CCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCC
Confidence 345578999998777666554 467899999875432 233333335688999998544 55555677899999998655
Q ss_pred eeEEeecCCCCeeEEEEcCCCCEEEEEEc--CCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEe-CCCcEEE
Q psy14440 536 PLRLFVGHYSDVDCVQFHPNSNYVATGSS--DRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAG-GDGNVHM 612 (711)
Q Consensus 536 ~~~~~~~h~~~V~~v~~sp~~~~latgs~--Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs-~Dg~I~i 612 (711)
....+.........|+++|.+.+|+.... .+.|...++............-...+.|+++++++.|+.+. ..+.|..
T Consensus 118 ~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~ 197 (619)
T 3s94_A 118 RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHK 197 (619)
T ss_dssp CEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEE
T ss_pred EEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEE
Confidence 44444355566789999997666666553 35677777654433333333445678999999766666554 5678999
Q ss_pred EECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q psy14440 613 WDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKL 660 (711)
Q Consensus 613 wDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~ 660 (711)
+|+..........+......+|++..+ .++++-...+.|...|..+.
T Consensus 198 ~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg 244 (619)
T 3s94_A 198 SNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTG 244 (619)
T ss_dssp ESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSC
T ss_pred ecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCC
Confidence 998654433322222222346676544 44444445677888886544
No 295
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.84 E-value=0.0071 Score=64.13 Aligned_cols=238 Identities=12% Similarity=0.127 Sum_probs=129.3
Q ss_pred EEEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeec
Q psy14440 379 ACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVG 458 (711)
Q Consensus 379 ~~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~ 458 (711)
....+...-..-..++|.+||+++++ ..+|.|++++ .+ +...+ .+.. .+..
T Consensus 22 ~~~~va~~l~~P~~ia~~pdG~l~V~-e~~g~I~~i~-~g-~~~~~--------------------~~~~------v~~~ 72 (352)
T 2ism_A 22 RVEEVVGGLEVPWALAFLPDGGMLIA-ERPGRIRLFR-EG-RLSTY--------------------AELS------VYHR 72 (352)
T ss_dssp CEEEEECCCSCEEEEEECTTSCEEEE-ETTTEEEEEE-TT-EEEEE--------------------EECC------CCCS
T ss_pred EEEEEECCCCCceEEEEcCCCeEEEE-eCCCeEEEEE-CC-CccEe--------------------ecce------Eeec
Confidence 33344444566789999999996655 4568888887 22 21110 0000 0111
Q ss_pred ccCCEEEEEEcCC---CCEEEEEeC-C-----CeEEEEECCCCe-----EEE-EEe---cCCCCEEEEEEcCCCCEEEEE
Q psy14440 459 HEGPVRKLSFSPD---RSLLLSCSQ-D-----NTIRLWSLLLWR-----CLV-VYK---GHGHPVWDIKFSPHGYYFASA 520 (711)
Q Consensus 459 h~~~V~~l~fspd---g~~L~s~s~-D-----g~V~iwdl~t~~-----~~~-~~~---~h~~~V~~v~~sp~g~~l~sg 520 (711)
..+....|+|+|+ +..|+++.. . +.|..|+..... .+. .+. +..+....++|.++|.++++.
T Consensus 73 g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 73 GESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp TTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred CCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence 2345789999998 555555443 2 568888876431 121 132 112234689999999766664
Q ss_pred EC-------------CCeEEEEECCCC------------ceeEEeecCCCCeeEEEEcC-CCCEEEEEEcCCcE------
Q psy14440 521 GH-------------DRMARLWATDSY------------HPLRLFVGHYSDVDCVQFHP-NSNYVATGSSDRTI------ 568 (711)
Q Consensus 521 s~-------------Dg~i~lwd~~~~------------~~~~~~~~h~~~V~~v~~sp-~~~~latgs~Dg~I------ 568 (711)
+. .|.|.-++.+.. .....+..-......++|++ +++.+++-.....+
T Consensus 153 G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~d 232 (352)
T 2ism_A 153 GEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHD 232 (352)
T ss_dssp CCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCC
T ss_pred CCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCe
Confidence 32 245666665531 11112221123356789999 66655554433331
Q ss_pred EEEECCCCc------------------EEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCe----E--EEEe
Q psy14440 569 RLWDCVTGS------------------HVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGH----L--LTLL 624 (711)
Q Consensus 569 ~iwD~~~~~------------------~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~----~--i~~l 624 (711)
.|.-+..+. .+..+ .+......++| .+|.++++.-..+.|...++.... . ...+
T Consensus 233 ei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~-~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~ 310 (352)
T 2ism_A 233 EVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFW-PQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETA 310 (352)
T ss_dssp EEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC-TTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEEeccCCcCCCCcccCCCCCCCCcCCeEec-CCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchhee
Confidence 122222222 12222 22334567777 467666666566778887765332 1 1222
Q ss_pred eCCCCCEEEEEEeCCCCEEEEEe
Q psy14440 625 TGHTDVVRALCFSRDGNILASSG 647 (711)
Q Consensus 625 ~~h~~~V~sl~fspdg~~Lasgs 647 (711)
-.-...+.++++.+||.++++..
T Consensus 311 ~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 311 LSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp EESSCCEEEEEECTTSCEEEEEC
T ss_pred cccCCCeeEEEECCCCcEEEEEe
Confidence 22236789999999998777654
No 296
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.80 E-value=0.0053 Score=64.53 Aligned_cols=143 Identities=15% Similarity=0.258 Sum_probs=99.1
Q ss_pred CCeEEEEECC--CCeEEEEEec------CC-CCEEEEEE--cCC-CC-EEEEEECCCeEEEEECC-------CCceeEEe
Q psy14440 481 DNTIRLWSLL--LWRCLVVYKG------HG-HPVWDIKF--SPH-GY-YFASAGHDRMARLWATD-------SYHPLRLF 540 (711)
Q Consensus 481 Dg~V~iwdl~--t~~~~~~~~~------h~-~~V~~v~~--sp~-g~-~l~sgs~Dg~i~lwd~~-------~~~~~~~~ 540 (711)
+++|++|++. ++. +..+.. .. ..+..+|+ ++. +. |+++...+|.+..|++. +.+.++.|
T Consensus 98 ~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f 176 (355)
T 3amr_A 98 KNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF 176 (355)
T ss_dssp CCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe
Confidence 5789999773 333 333311 11 45666777 663 44 67888889999999883 33556777
Q ss_pred ecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECC-----CCcEEEEee-CC-CCCeEEEEE--ecCCC-EEEEEe-CCCc
Q psy14440 541 VGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCV-----TGSHVRLLT-GH-KAPVYALSF--SVCGR-FLASAG-GDGN 609 (711)
Q Consensus 541 ~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~-----~~~~v~~~~-~h-~~~I~~la~--spdg~-~Lasgs-~Dg~ 609 (711)
.. .+.+..|...+...+|+.+-.+.-|..+|.. +++.+..+. ++ ...+..|++ .++|+ ||++++ .+++
T Consensus 177 ~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s 255 (355)
T 3amr_A 177 KM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSS 255 (355)
T ss_dssp EC-SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTE
T ss_pred cC-CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCE
Confidence 64 4578889999888999999998778778855 355665553 22 246888888 45555 666665 6779
Q ss_pred EEEEECC-CCeEEEEee
Q psy14440 610 VHMWDLS-NGHLLTLLT 625 (711)
Q Consensus 610 I~iwDl~-sg~~i~~l~ 625 (711)
..+||.. +.+.+..+.
T Consensus 256 ~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 256 YAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEEEESSTTCCEEEEEE
T ss_pred EEEEECCCCCcEEEEEE
Confidence 9999996 677777774
No 297
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.75 E-value=0.018 Score=65.91 Aligned_cols=197 Identities=9% Similarity=-0.068 Sum_probs=130.5
Q ss_pred CCEEEEEEcCCCCEEEEE-eCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCC-CEEEEEECCCeEEEEECCCCceeE
Q psy14440 461 GPVRKLSFSPDRSLLLSC-SQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG-YYFASAGHDRMARLWATDSYHPLR 538 (711)
Q Consensus 461 ~~V~~l~fspdg~~L~s~-s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g-~~l~sgs~Dg~i~lwd~~~~~~~~ 538 (711)
..+.+++|++.+..|+.+ ..++.|..+++........+.........+++...+ +.+++-...+.|.+.+++......
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~ 116 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQV 116 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEE
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEE
Confidence 467899999876666554 457889999987654444443333456678887654 455555667889999998655433
Q ss_pred EeecCCCCeeEEEEcCCCCEEEEEEc--CCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEEC
Q psy14440 539 LFVGHYSDVDCVQFHPNSNYVATGSS--DRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAG-GDGNVHMWDL 615 (711)
Q Consensus 539 ~~~~h~~~V~~v~~sp~~~~latgs~--Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs-~Dg~I~iwDl 615 (711)
.+.........|+++|...+|+.... .+.|...++..... ..+...-...+.|+++++++.|+.+. ..+.|..+|+
T Consensus 117 l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~-~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~ 195 (628)
T 4a0p_A 117 LVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER-TTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 195 (628)
T ss_dssp EECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce-EEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcC
Confidence 44355566789999996666666553 46788888765443 33333456788999999877776665 4578999998
Q ss_pred CCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q psy14440 616 SNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKL 660 (711)
Q Consensus 616 ~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~ 660 (711)
..... ..+........+|++.. +.++++-...+.|...|..+.
T Consensus 196 dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg 238 (628)
T 4a0p_A 196 LGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSG 238 (628)
T ss_dssp TSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTC
T ss_pred CCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCC
Confidence 65433 33333344567888864 455555555778888885443
No 298
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.75 E-value=0.025 Score=59.99 Aligned_cols=238 Identities=16% Similarity=0.129 Sum_probs=133.0
Q ss_pred eEEEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEee
Q psy14440 378 IACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLV 457 (711)
Q Consensus 378 ~~~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~ 457 (711)
.....+...-..-.+++|.+||+++++ ..+|.|++++..+ + ..+. +.. ...
T Consensus 19 ~~~~~va~~l~~P~~ia~~pdG~l~V~-e~~g~I~~~d~~G-~-~~~~--------------------~~~------v~~ 69 (354)
T 3a9g_A 19 FKISEVASDLEVPWSIAPLGGGRYLVT-ERPGRLVLISPSG-K-KLVA--------------------SFD------VAN 69 (354)
T ss_dssp EEEEEEECSCSCEEEEEEEETTEEEEE-ETTTEEEEECSSC-E-EEEE--------------------ECC------CCC
T ss_pred eEEEEEeCCCCCCeEEEEcCCCeEEEE-eCCCEEEEEeCCC-c-eEee--------------------ccc------eee
Confidence 444455555567889999999986555 4558888886322 1 1100 000 011
Q ss_pred cccCCEEEEEEcCC---CCEEEEEeC----C----CeEEEEECCCC-------eEE-EEEec-CCCCEEEEEEcCCCCEE
Q psy14440 458 GHEGPVRKLSFSPD---RSLLLSCSQ----D----NTIRLWSLLLW-------RCL-VVYKG-HGHPVWDIKFSPHGYYF 517 (711)
Q Consensus 458 ~h~~~V~~l~fspd---g~~L~s~s~----D----g~V~iwdl~t~-------~~~-~~~~~-h~~~V~~v~~sp~g~~l 517 (711)
...+....|+|+|+ +..|+++.. + +.|..|+.... +.+ ..+.. ..+....++|.|+|.++
T Consensus 70 ~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Ly 149 (354)
T 3a9g_A 70 VGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLY 149 (354)
T ss_dssp STTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEE
T ss_pred cCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEE
Confidence 12345788999997 555555433 2 56777776543 111 11221 12234679999999877
Q ss_pred EEEEC-------------CCeEEEEECCCCc-------eeEEe-ecCCCCeeEEEEcC-CCCEEEEEEcCC---cEEEEE
Q psy14440 518 ASAGH-------------DRMARLWATDSYH-------PLRLF-VGHYSDVDCVQFHP-NSNYVATGSSDR---TIRLWD 572 (711)
Q Consensus 518 ~sgs~-------------Dg~i~lwd~~~~~-------~~~~~-~~h~~~V~~v~~sp-~~~~latgs~Dg---~I~iwD 572 (711)
++.+. .|.|.-++.+..- ...++ .++ .....++|++ +++.+++-...+ .|.+.
T Consensus 150 vt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i- 227 (354)
T 3a9g_A 150 ITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGH-RNPQGIDWHRASGVMVATEHGPVGHDEVNII- 227 (354)
T ss_dssp EECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEE-
T ss_pred EEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEcc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEe-
Confidence 66442 2456666655320 01222 233 3356899999 566555433222 13332
Q ss_pred CCCCc------------------EEEEeeCCCCCeEEEEEe-------cCCCEEEEEeCCCcEEEEECCCC-eEE--EEe
Q psy14440 573 CVTGS------------------HVRLLTGHKAPVYALSFS-------VCGRFLASAGGDGNVHMWDLSNG-HLL--TLL 624 (711)
Q Consensus 573 ~~~~~------------------~v~~~~~h~~~I~~la~s-------pdg~~Lasgs~Dg~I~iwDl~sg-~~i--~~l 624 (711)
..|. .+..+.........++|. .+|.++++.-..+.|...++... +.. ..+
T Consensus 228 -~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~ 306 (354)
T 3a9g_A 228 -LKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTF 306 (354)
T ss_dssp -CTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEE
T ss_pred -cCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeee
Confidence 2221 122221123457788883 56777777667778998888753 332 223
Q ss_pred -eCCCCCEEEEEEeCCCCEEEEEe
Q psy14440 625 -TGHTDVVRALCFSRDGNILASSG 647 (711)
Q Consensus 625 -~~h~~~V~sl~fspdg~~Lasgs 647 (711)
.+....+..+++.+||.++++..
T Consensus 307 ~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 307 FKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CTTTSCCEEEEEECTTSCEEEEEC
T ss_pred ccCCCCCeeEEEECCCCcEEEEEe
Confidence 22245789999999998777654
No 299
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.72 E-value=0.0054 Score=64.20 Aligned_cols=151 Identities=13% Similarity=0.149 Sum_probs=97.0
Q ss_pred cccCCEEEEEEcCCCCEEEEEeCCCeEEEEEC--CCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Q psy14440 458 GHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL--LLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYH 535 (711)
Q Consensus 458 ~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl--~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~ 535 (711)
++.+.+.++.+.+++.+++++...+..+-+|- .+++.+. ......+..+.+.+++..+ .++.+|.+++.+.+.++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~ 236 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSE 236 (327)
T ss_dssp SCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEE
T ss_pred CCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCC
Confidence 45567899999999887776654443444453 4566553 2456678899999888655 55567888777544333
Q ss_pred eeEEee-c---CCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeC---CCCCeEEEEEecCCCEEEEEeCCC
Q psy14440 536 PLRLFV-G---HYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTG---HKAPVYALSFSVCGRFLASAGGDG 608 (711)
Q Consensus 536 ~~~~~~-~---h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~---h~~~I~~la~spdg~~Lasgs~Dg 608 (711)
....+. . +...+.++.+.+++..++++. +|.| ++....|+.-..+.. ....++++.|..+++ +++++.+|
T Consensus 237 tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G 313 (327)
T 2xbg_A 237 NWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKG 313 (327)
T ss_dssp EECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTT
T ss_pred eeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCc
Confidence 222222 1 223588999998877766655 6766 455555655554442 345688899986555 55666788
Q ss_pred cEEEEE
Q psy14440 609 NVHMWD 614 (711)
Q Consensus 609 ~I~iwD 614 (711)
.|.-++
T Consensus 314 ~i~~~~ 319 (327)
T 2xbg_A 314 ILLRYV 319 (327)
T ss_dssp EEEEEC
T ss_pred eEEEEc
Confidence 877765
No 300
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.67 E-value=0.083 Score=55.64 Aligned_cols=245 Identities=14% Similarity=0.102 Sum_probs=134.8
Q ss_pred CceEEEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEE
Q psy14440 376 PSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRT 455 (711)
Q Consensus 376 ps~~~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 455 (711)
+-.....+...-..-+.++|.+||+++++--..|.|++++..+.+...+.. .. ..
T Consensus 20 ~~~~~~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~--------------------~~-----~v 74 (347)
T 3das_A 20 SVKVLRTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGE--------------------VP-----GV 74 (347)
T ss_dssp CEEEEEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE--------------------CT-----TC
T ss_pred CCceeEEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecc--------------------cC-----ce
Confidence 334445566667788999999999988777668888888754332211100 00 00
Q ss_pred eecccCCEEEEEEcCC---CCEEEEE---eCCCeEEEEECCC----------CeEEE-EEe-cCCCCEEEEEEcCCCCEE
Q psy14440 456 LVGHEGPVRKLSFSPD---RSLLLSC---SQDNTIRLWSLLL----------WRCLV-VYK-GHGHPVWDIKFSPHGYYF 517 (711)
Q Consensus 456 l~~h~~~V~~l~fspd---g~~L~s~---s~Dg~V~iwdl~t----------~~~~~-~~~-~h~~~V~~v~~sp~g~~l 517 (711)
+....+....|+|+|+ +..|+.+ ..++.|.-|.+.. .+.+. .+. ...+....|.|.++|.++
T Consensus 75 ~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Ly 154 (347)
T 3das_A 75 SPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLY 154 (347)
T ss_dssp CCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEE
T ss_pred eecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEE
Confidence 1123456788999885 3444433 2344566665543 12222 121 122334579999999877
Q ss_pred EEEEC-------------CCeEEEEECCCCc-------eeEEee-cCCCCeeEEEEcCCCCEEEEEE-cCCcEEEEECCC
Q psy14440 518 ASAGH-------------DRMARLWATDSYH-------PLRLFV-GHYSDVDCVQFHPNSNYVATGS-SDRTIRLWDCVT 575 (711)
Q Consensus 518 ~sgs~-------------Dg~i~lwd~~~~~-------~~~~~~-~h~~~V~~v~~sp~~~~latgs-~Dg~I~iwD~~~ 575 (711)
++.+. .|.|.-.+.+..- ...++. +|. ....++|+|++.+.++-. .|+.-.|--+..
T Consensus 155 vt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i~~ 233 (347)
T 3das_A 155 AGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAIKP 233 (347)
T ss_dssp EECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEECT
T ss_pred EEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEEecCCCCCceeeEEcC
Confidence 77542 3455555554320 112233 443 456899999877655432 233223322222
Q ss_pred Cc------------------EEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeE----EEEeeCCCCCEEE
Q psy14440 576 GS------------------HVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHL----LTLLTGHTDVVRA 633 (711)
Q Consensus 576 ~~------------------~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~----i~~l~~h~~~V~s 633 (711)
|. .+..+..+......++|. +|..+...-..+.|....+..+.. ...+.+..+.+.+
T Consensus 234 G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~d 312 (347)
T 3das_A 234 GDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRT 312 (347)
T ss_dssp TCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEE
T ss_pred CCEecCCcccCCCCCccccCCcEecCCCCCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccE
Confidence 21 122222222356677776 465555555566777777655432 2233444567999
Q ss_pred EEEeCCCCEEEEEe
Q psy14440 634 LCFSRDGNILASSG 647 (711)
Q Consensus 634 l~fspdg~~Lasgs 647 (711)
++..+||.++++..
T Consensus 313 v~~~pDG~lyv~td 326 (347)
T 3das_A 313 VAPAGGDKLWLVTS 326 (347)
T ss_dssp EEEEETTEEEEEEC
T ss_pred EEECCCCcEEEEEc
Confidence 99999998766654
No 301
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.64 E-value=0.00013 Score=84.95 Aligned_cols=218 Identities=12% Similarity=-0.023 Sum_probs=127.1
Q ss_pred cEEEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEe-CCCeEEEEECCC----CeEEEEEecCCCCEEEEEEcC-C
Q psy14440 440 ILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCS-QDNTIRLWSLLL----WRCLVVYKGHGHPVWDIKFSP-H 513 (711)
Q Consensus 440 ~~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s-~Dg~V~iwdl~t----~~~~~~~~~h~~~V~~v~~sp-~ 513 (711)
..|+.++..+......+. ....+.+++|++.+..|+.+. ..+.|+.+++.. ......+.........|++.. .
T Consensus 386 ~~I~~id~~~~~~~~~~~-~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~ 464 (699)
T 1n7d_A 386 HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 464 (699)
T ss_dssp TC-CEECTTSCCEECCSC-CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSS
T ss_pred cceEEEeCCCCcceeeec-cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeC
Confidence 455666665544333322 234567899998777666654 457899999875 222222211122344677775 4
Q ss_pred CCEEEEEECCCeEEEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEc-C-CcEEEEECCCCcEEEEeeCCCCCeEE
Q psy14440 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSS-D-RTIRLWDCVTGSHVRLLTGHKAPVYA 591 (711)
Q Consensus 514 g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~-D-g~I~iwD~~~~~~v~~~~~h~~~I~~ 591 (711)
++++++-...+.|.+++++.......+.........|+++|.+.+|+.+.. . +.|.++++........+...-...+.
T Consensus 465 g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnG 544 (699)
T 1n7d_A 465 SNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNG 544 (699)
T ss_dssp SBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCC
T ss_pred CcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccE
Confidence 455555556788999998865544444333456788999986655554432 2 67888877543322222223345678
Q ss_pred EEEecCCCEEEEE-eCCCcEEEEECCCCeEEEEee--CCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 592 LSFSVCGRFLASA-GGDGNVHMWDLSNGHLLTLLT--GHTDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 592 la~spdg~~Lasg-s~Dg~I~iwDl~sg~~i~~l~--~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
|+|++++..|+.+ +..+.|.++|+........+. .......+|++..+ .++++....+.|..+|..+
T Consensus 545 lavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~ 614 (699)
T 1n7d_A 545 ITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLT 614 (699)
T ss_dssp EEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTT
T ss_pred EEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccC
Confidence 9999876655544 456789999986433322222 11233445666543 4555555678899988643
No 302
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.63 E-value=0.0028 Score=65.99 Aligned_cols=159 Identities=8% Similarity=0.064 Sum_probs=111.6
Q ss_pred cCCCCEEEEEEcCCCCEEEEEE-CCCeEEEEECCCCceeEEeecCC-------CCeeEEEE---cCCCCEEEEEEc----
Q psy14440 500 GHGHPVWDIKFSPHGYYFASAG-HDRMARLWATDSYHPLRLFVGHY-------SDVDCVQF---HPNSNYVATGSS---- 564 (711)
Q Consensus 500 ~h~~~V~~v~~sp~g~~l~sgs-~Dg~i~lwd~~~~~~~~~~~~h~-------~~V~~v~~---sp~~~~latgs~---- 564 (711)
.....-.+++|......|..++ ..++|..|+...+.......... ..+..+.| .++++++++...
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af 89 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSF 89 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTT
T ss_pred CcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccc
Confidence 3344445789988666666666 79999999998654433322221 13579999 688777775442
Q ss_pred ---------CCcEEEEECC---CCcEEEEeeC-------------CCCCeEEEEEecCCCEEEEEeCC-CcEEEEECCCC
Q psy14440 565 ---------DRTIRLWDCV---TGSHVRLLTG-------------HKAPVYALSFSVCGRFLASAGGD-GNVHMWDLSNG 618 (711)
Q Consensus 565 ---------Dg~I~iwD~~---~~~~v~~~~~-------------h~~~I~~la~spdg~~Lasgs~D-g~I~iwDl~sg 618 (711)
+..|..||+. +++.+....- -......++..++|+..++++.. +.|..++.. |
T Consensus 90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd-G 168 (334)
T 2p9w_A 90 NFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD-G 168 (334)
T ss_dssp CTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT-S
T ss_pred cccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC-C
Confidence 6779999999 7877655431 11347899999999999988888 888888864 3
Q ss_pred eEEEEee-C-----CCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 619 HLLTLLT-G-----HTDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 619 ~~i~~l~-~-----h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
+.+..+. . .....+.|+++|+|+.|++...+|.|..+|+..
T Consensus 169 ~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 169 KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 3333221 1 122467999999999888887799999999884
No 303
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.61 E-value=0.039 Score=58.38 Aligned_cols=249 Identities=11% Similarity=0.104 Sum_probs=132.3
Q ss_pred EEEEecCCCceEEEEECCCCC-EEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeec
Q psy14440 380 CYTLLNARQQVTCAEISEDVS-ILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVG 458 (711)
Q Consensus 380 ~~tl~~h~~~V~~l~fs~dg~-~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~ 458 (711)
...+...-..-..++|.+||+ +++ +...|.|++++..+.....+.. . . .....
T Consensus 10 ~~~va~~l~~P~~i~~~pdG~~l~V-~e~~G~i~~~~~~g~~~~~~~~---~-----------------~-----~v~~~ 63 (353)
T 2g8s_A 10 VEVLQDKLDHPWALAFLPDNHGMLI-TLRGGELRHWQAGKGLSAPLSG---V-----------------P-----DVWAH 63 (353)
T ss_dssp EEEEEEEESSEEEEEECSTTCCEEE-EETTTEEEEEETTTEECCCCBS---C-----------------C-----CCCCS
T ss_pred EEEEECCCCCcEEEEEcCCCCEEEE-EeCCceEEEEeCCCceeeEecC---C-----------------c-----ccccC
Confidence 333333345678999999999 554 4567889888753221100000 0 0 00111
Q ss_pred ccCCEEEEEEcCC---CCEEEEEe-C-------CCeEEEEECCCC-----eEEEEEec------CCCCEEEEEEcCCCCE
Q psy14440 459 HEGPVRKLSFSPD---RSLLLSCS-Q-------DNTIRLWSLLLW-----RCLVVYKG------HGHPVWDIKFSPHGYY 516 (711)
Q Consensus 459 h~~~V~~l~fspd---g~~L~s~s-~-------Dg~V~iwdl~t~-----~~~~~~~~------h~~~V~~v~~sp~g~~ 516 (711)
..+....++|+|+ +..|+.+. . ...|..|++... .....+.. ..+.-..+.|.|+|.+
T Consensus 64 g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~L 143 (353)
T 2g8s_A 64 GQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYL 143 (353)
T ss_dssp TTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEE
T ss_pred CCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcE
Confidence 2345678888885 44454442 2 234666665432 11112221 1122457999999965
Q ss_pred EEEEEC-------------CCeEEEEECCCCc------------eeEEeecCCCCeeEEEEcC-CCCEEEEEEc-CCcEE
Q psy14440 517 FASAGH-------------DRMARLWATDSYH------------PLRLFVGHYSDVDCVQFHP-NSNYVATGSS-DRTIR 569 (711)
Q Consensus 517 l~sgs~-------------Dg~i~lwd~~~~~------------~~~~~~~h~~~V~~v~~sp-~~~~latgs~-Dg~I~ 569 (711)
+++.+. .|.|.-++.+..- ...++..-......++|++ +++.+++-.. ++.=.
T Consensus 144 yv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~de 223 (353)
T 2g8s_A 144 FIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDE 223 (353)
T ss_dssp EEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEE
T ss_pred EEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcE
Confidence 555443 2467667765421 1222322223467899999 5544443221 11122
Q ss_pred EEECCCCc-------------------------------EEEEeeCCCCCeEEEEEec-------CCCEEEEEeCCCcEE
Q psy14440 570 LWDCVTGS-------------------------------HVRLLTGHKAPVYALSFSV-------CGRFLASAGGDGNVH 611 (711)
Q Consensus 570 iwD~~~~~-------------------------------~v~~~~~h~~~I~~la~sp-------dg~~Lasgs~Dg~I~ 611 (711)
|.-+..+. .+..+. +......++|.. +|+++++.-..+.|.
T Consensus 224 i~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~-~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~ 302 (353)
T 2g8s_A 224 INIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWK-DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVI 302 (353)
T ss_dssp EECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEES-SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEE
T ss_pred EeEeccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeC-CCcCcceeEEECCccCcccCCcEEEEEccCCEEE
Confidence 22222111 111222 234567788864 467777766778888
Q ss_pred EEECCCCeEEEEe---eCCCCCEEEEEEeCCCCEEEEEe-CCCcEEEEeC
Q psy14440 612 MWDLSNGHLLTLL---TGHTDVVRALCFSRDGNILASSG-QDCSVKLWDF 657 (711)
Q Consensus 612 iwDl~sg~~i~~l---~~h~~~V~sl~fspdg~~Lasgs-~Dg~V~iWdl 657 (711)
..++..++.+... ......+..+++.+||.++++.. .+| +||.+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g--~I~ri 350 (353)
T 2g8s_A 303 VMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSG--ELLKV 350 (353)
T ss_dssp EEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTE--EEEEE
T ss_pred EEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCC--EEEEE
Confidence 8888776554332 22235789999999999666543 344 45544
No 304
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.60 E-value=0.0062 Score=67.33 Aligned_cols=195 Identities=12% Similarity=0.132 Sum_probs=121.0
Q ss_pred CEEEEEEcC-CCCEEEEEeC-CCeEEEEECCCCeEEEEEecC---CCCEEEEEE-------cCCCCEEEEEECCC-----
Q psy14440 462 PVRKLSFSP-DRSLLLSCSQ-DNTIRLWSLLLWRCLVVYKGH---GHPVWDIKF-------SPHGYYFASAGHDR----- 524 (711)
Q Consensus 462 ~V~~l~fsp-dg~~L~s~s~-Dg~V~iwdl~t~~~~~~~~~h---~~~V~~v~~-------sp~g~~l~sgs~Dg----- 524 (711)
....|+|+| ++..|+.+.. .+.|++.|+.++......... ......++| +++|.+++++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 467899998 4555655554 467999999887776655432 235889999 99998666666543
Q ss_pred --eEEEEECCC-Ccee-----EEeecCCCCeeEEEEcCC-CCEEEEEEcCCcEEEEECC-------CCcE----------
Q psy14440 525 --MARLWATDS-YHPL-----RLFVGHYSDVDCVQFHPN-SNYVATGSSDRTIRLWDCV-------TGSH---------- 578 (711)
Q Consensus 525 --~i~lwd~~~-~~~~-----~~~~~h~~~V~~v~~sp~-~~~latgs~Dg~I~iwD~~-------~~~~---------- 578 (711)
.|.+++... +... +.+.. ......++++|+ +.++++-..++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 255665443 1211 22322 234567889994 5555566678889999987 5543
Q ss_pred -EEE-ee-CCCCCeEEEEEecCCCEEEEE-eCCCcEEEEEC--CCCeEE--EEeeCC---C------------CCEE-EE
Q psy14440 579 -VRL-LT-GHKAPVYALSFSVCGRFLASA-GGDGNVHMWDL--SNGHLL--TLLTGH---T------------DVVR-AL 634 (711)
Q Consensus 579 -v~~-~~-~h~~~I~~la~spdg~~Lasg-s~Dg~I~iwDl--~sg~~i--~~l~~h---~------------~~V~-sl 634 (711)
... +. +.....+.|+|+|+|++|+.+ +..++|+.+|. ..+... ..+.+. . .... .+
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv 378 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGV 378 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEE
Confidence 112 22 234456899999999965555 45678888654 344321 222221 1 1244 45
Q ss_pred EEe-------CCCCEEEEEeCCCcEEEEeC
Q psy14440 635 CFS-------RDGNILASSGQDCSVKLWDF 657 (711)
Q Consensus 635 ~fs-------pdg~~Lasgs~Dg~V~iWdl 657 (711)
+.. .+|.++++-...++||.++.
T Consensus 379 ~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~ 408 (496)
T 3kya_A 379 FVKNPDYTGEEEYDFYFVDRLNFCVRKVTP 408 (496)
T ss_dssp EEECTTCCSSCCEEEEEEEGGGTEEEEECT
T ss_pred EEccccccccCCCeEEEEECCCCEEEEEeC
Confidence 554 56777777777888999983
No 305
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.52 E-value=0.0053 Score=63.00 Aligned_cols=181 Identities=13% Similarity=0.129 Sum_probs=97.0
Q ss_pred CCCEEEEEeCC-----CeEEEEECCC-----CeEEEEEecCCCCEEEEEEcCCCCEEEEEECC-----CeEEEEECCCCc
Q psy14440 471 DRSLLLSCSQD-----NTIRLWSLLL-----WRCLVVYKGHGHPVWDIKFSPHGYYFASAGHD-----RMARLWATDSYH 535 (711)
Q Consensus 471 dg~~L~s~s~D-----g~V~iwdl~t-----~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~D-----g~i~lwd~~~~~ 535 (711)
++..++.|+.+ ..+.+||..+ ++.+..+.........+.+ +++.++.|+.+ ..+.+||..+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 56666666654 4588999865 4444322221222222222 56677777654 368888887654
Q ss_pred ee--EEeecCCCCeeEEEEcCCCCEEEEEEcC-----CcEEEEECCCCcEEEEee--CCCCCeEEEEEecCCCEEEEEeC
Q psy14440 536 PL--RLFVGHYSDVDCVQFHPNSNYVATGSSD-----RTIRLWDCVTGSHVRLLT--GHKAPVYALSFSVCGRFLASAGG 606 (711)
Q Consensus 536 ~~--~~~~~h~~~V~~v~~sp~~~~latgs~D-----g~I~iwD~~~~~~v~~~~--~h~~~I~~la~spdg~~Lasgs~ 606 (711)
=. ..+........++.+ +++.++.|+.+ ..+.+||..+++-...-. .......++. -++++++.|+.
T Consensus 140 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~ 215 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL--LNDHIYVVGGF 215 (301)
T ss_dssp EEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCB
T ss_pred EEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE--ECCEEEEEeCC
Confidence 22 222111111222222 56677777654 468899988775433211 1111222222 35777777776
Q ss_pred C-----CcEEEEECCCCeEEEEe--eCCCCCEEEEEEeCCCCEEEEEeCCC-----cEEEEeCCC
Q psy14440 607 D-----GNVHMWDLSNGHLLTLL--TGHTDVVRALCFSRDGNILASSGQDC-----SVKLWDFAK 659 (711)
Q Consensus 607 D-----g~I~iwDl~sg~~i~~l--~~h~~~V~sl~fspdg~~Lasgs~Dg-----~V~iWdl~~ 659 (711)
+ ..|.+||+.+.+-...- .........+. -++++++.||.++ .|.+||+.+
T Consensus 216 ~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 216 DGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPII 278 (301)
T ss_dssp CSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTT
T ss_pred CCCcccceEEEEeCCCCcEEECCCCCCcccceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCC
Confidence 4 46899999887644332 11111112222 2677888887663 567777764
No 306
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.52 E-value=0.16 Score=62.34 Aligned_cols=265 Identities=15% Similarity=0.174 Sum_probs=146.3
Q ss_pred CCceEEEEECCC------CCEEEEEeC-CCeEEEEeCCCCceeeeccC-----c---------cccccccccCCcEEEE-
Q psy14440 387 RQQVTCAEISED------VSILAVGFS-ESYIKLWSLVPQKLKAMKSS-----D---------QLQDIEMECDDILVRI- 444 (711)
Q Consensus 387 ~~~V~~l~fs~d------g~~LatG~~-dg~I~vWdl~~~~~~~~~~~-----~---------~~~~l~~~~~d~~i~i- 444 (711)
.+.|.|+++.+. ++++|+|+. |++|+|+++.+.+......- + ....+.++-.+|.+..
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 568999999863 479999997 99999999976442221100 0 1123445555666533
Q ss_pred -EecCCCeeEE---EeecccCCEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCeEEEEEecCCCCE-EEEEEcCC--CCE
Q psy14440 445 -MDERNAETTR---TLVGHEGPVRKLSFSPDRS-LLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPV-WDIKFSPH--GYY 516 (711)
Q Consensus 445 -~d~~~~~~~~---~l~~h~~~V~~l~fspdg~-~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V-~~v~~sp~--g~~ 516 (711)
+|..++.... .+.| ..+|.-..|...|. .++++| +....+|.-.. +.... .-....+ ....|+.. ..-
T Consensus 633 ~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s-~rp~liy~~~~-~l~~s-~l~~~~v~~~~~F~se~~~~g 708 (1158)
T 3ei3_A 633 GLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACS-DRPTVIYSSNH-KLVFS-NVNLKEVNYMCPLNSDGYPDS 708 (1158)
T ss_dssp EECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEES-SSCEEEEESSS-SEEEE-EBSSSCCCEEEEECCSSSTTE
T ss_pred EEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEEC-CCCEEEEEcCC-ceEEe-ccChHHhceEeccCcccCCCc
Confidence 4444444332 2233 34555555554444 344444 44444444332 22211 1112222 33445432 234
Q ss_pred EEEEECCCeEEEEECCCCc--eeEEeecCCCCeeEEEEcCCCCEEEEEEcC-----------------------------
Q psy14440 517 FASAGHDRMARLWATDSYH--PLRLFVGHYSDVDCVQFHPNSNYVATGSSD----------------------------- 565 (711)
Q Consensus 517 l~sgs~Dg~i~lwd~~~~~--~~~~~~~h~~~V~~v~~sp~~~~latgs~D----------------------------- 565 (711)
++..+ ++.++|..++... .++.+. -...+..+++||+.+.++.++.+
T Consensus 709 ~v~~~-~~~LrI~~i~~~~~~~~~~ip-L~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (1158)
T 3ei3_A 709 LALAN-NSTLTIGTIDEIQKLHIRTVP-LYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSS 786 (1158)
T ss_dssp EEEEC-SSCEEEEEECCSSSEEEEEEE-CSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCC
T ss_pred EEEEc-CCceEEEEecccCCeeEEEEe-CCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhccccc
Confidence 54443 4569998876433 233332 23567888999877765554321
Q ss_pred --------------------CcEEEEECCCCcEEEEeeC-CCCCeEEEEE---ecC-CCEEEEEe----------CCCcE
Q psy14440 566 --------------------RTIRLWDCVTGSHVRLLTG-HKAPVYALSF---SVC-GRFLASAG----------GDGNV 610 (711)
Q Consensus 566 --------------------g~I~iwD~~~~~~v~~~~~-h~~~I~~la~---spd-g~~Lasgs----------~Dg~I 610 (711)
+.|++.|-.+++.+..+.- ....+.|++. ..+ ..+|++|+ ..|.|
T Consensus 787 ~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri 866 (1158)
T 3ei3_A 787 KLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRI 866 (1158)
T ss_dssp CCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEE
T ss_pred ccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEE
Confidence 2366777777776655542 2334555543 222 46888886 34899
Q ss_pred EEEECCCCeEEEEee-CCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q psy14440 611 HMWDLSNGHLLTLLT-GHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKL 660 (711)
Q Consensus 611 ~iwDl~sg~~i~~l~-~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~ 660 (711)
++|++..++.....+ ...+.|++|+-- +|++|+ |- ..+|++|++...
T Consensus 867 ~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g~Lla-~i-g~~l~vy~l~~~ 914 (1158)
T 3ei3_A 867 VVFQYSDGKLQTVAEKEVKGAVYSMVEF-NGKLLA-SI-NSTVRLYEWTTE 914 (1158)
T ss_dssp EEEEEETTEEEEEEEEEESSCEEEEEEE-TTEEEE-EE-TTEEEEEEECTT
T ss_pred EEEEEECCEEEEEEEEEcCCcCEEEeee-CCEEEE-Ec-CCEEEEEECCCC
Confidence 999997654332221 235788888744 454444 33 479999999754
No 307
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.47 E-value=0.0002 Score=83.42 Aligned_cols=174 Identities=11% Similarity=0.009 Sum_probs=102.3
Q ss_pred EEEEEEcCCCCEE-EEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEE-CC-CeEEEEECCCCceeEE
Q psy14440 463 VRKLSFSPDRSLL-LSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAG-HD-RMARLWATDSYHPLRL 539 (711)
Q Consensus 463 V~~l~fspdg~~L-~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs-~D-g~i~lwd~~~~~~~~~ 539 (711)
..+|++.+.+..| ++-...+.|.++++........+.........|++.|.+.+|+.+. .. +.|.+++++.......
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l 534 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL 534 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEE
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEE
Confidence 3457777544444 4445567899999875544433332234456788998654444433 22 6788877765433333
Q ss_pred eecCCCCeeEEEEcCCCCEEE-EEEcCCcEEEEECCCCcEEEEeeC--CCCCeEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy14440 540 FVGHYSDVDCVQFHPNSNYVA-TGSSDRTIRLWDCVTGSHVRLLTG--HKAPVYALSFSVCGRFLASAGGDGNVHMWDLS 616 (711)
Q Consensus 540 ~~~h~~~V~~v~~sp~~~~la-tgs~Dg~I~iwD~~~~~~v~~~~~--h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~ 616 (711)
+.........|+|++++..|+ +-+..+.|.++|+........+.. .......|++..+ .++++....+.|..+|..
T Consensus 535 ~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~ 613 (699)
T 1n7d_A 535 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRL 613 (699)
T ss_dssp SCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETT
T ss_pred EeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEcc
Confidence 333345567899998755554 444567899999864433222221 1233445666543 444455566899999988
Q ss_pred CCeEEEEeeCCCCCEEEEEEe
Q psy14440 617 NGHLLTLLTGHTDVVRALCFS 637 (711)
Q Consensus 617 sg~~i~~l~~h~~~V~sl~fs 637 (711)
+|+.+..+.......++|++.
T Consensus 614 ~G~~~~~i~~~~~~P~~i~v~ 634 (699)
T 1n7d_A 614 TGSDVNLLAENLLSPEDMVLF 634 (699)
T ss_dssp TEEEEECCCTTCSSCCCCCBC
T ss_pred CCCceEEeecCCCCCcEEEEe
Confidence 888887775433334444443
No 308
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.47 E-value=0.033 Score=58.90 Aligned_cols=192 Identities=14% Similarity=0.103 Sum_probs=102.9
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEE--e---cCCCCEEEEEEcCC---CCEEEEE-ECC-----CeE
Q psy14440 461 GPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY--K---GHGHPVWDIKFSPH---GYYFASA-GHD-----RMA 526 (711)
Q Consensus 461 ~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~--~---~h~~~V~~v~~sp~---g~~l~sg-s~D-----g~i 526 (711)
..-.+++|.++|++ +++..+|.|++++ .++..... . ........|+|+|+ +..|.++ +.. +.|
T Consensus 31 ~~P~~ia~~pdG~l-~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGM-LIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCE-EEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeE-EEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 34679999999985 4456679999998 44432211 1 12356789999998 4444443 322 567
Q ss_pred EEEECCCCce-----e-EEee---cCCCCeeEEEEcCCCCEEEEEEc-------------CCcEEEEECCCC--------
Q psy14440 527 RLWATDSYHP-----L-RLFV---GHYSDVDCVQFHPNSNYVATGSS-------------DRTIRLWDCVTG-------- 576 (711)
Q Consensus 527 ~lwd~~~~~~-----~-~~~~---~h~~~V~~v~~sp~~~~latgs~-------------Dg~I~iwD~~~~-------- 576 (711)
..|+...... + ..+. +.......++|.|+|.++++.+. .|.|.-+|....
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~ 187 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFL 187 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTT
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCccc
Confidence 7787764321 1 1122 11123468999999976665432 145655655420
Q ss_pred ----cEEEE-eeCCCCCeEEEEEec-CCCEEEEEeCCCcE------EEEECCCCe------------------EEEEeeC
Q psy14440 577 ----SHVRL-LTGHKAPVYALSFSV-CGRFLASAGGDGNV------HMWDLSNGH------------------LLTLLTG 626 (711)
Q Consensus 577 ----~~v~~-~~~h~~~I~~la~sp-dg~~Lasgs~Dg~I------~iwDl~sg~------------------~i~~l~~ 626 (711)
..... -.++. ....++|++ +|+++++-...+.+ .|.-+..|. .+..+.
T Consensus 188 ~~~~~~~~i~a~G~r-np~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~- 265 (352)
T 2ism_A 188 GRRGARPEVYSLGHR-NPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWP- 265 (352)
T ss_dssp TCTTSCTTEEEECCS-EECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT-
T ss_pred CCCCCCccEEEEcCC-CcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecC-
Confidence 01111 12333 246789999 66655544333331 122222221 122222
Q ss_pred CCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCC
Q psy14440 627 HTDVVRALCFSRDGNILASSGQDCSVKLWDFA 658 (711)
Q Consensus 627 h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~ 658 (711)
+......++| .+|+++++.-..+.|...++.
T Consensus 266 ~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~ 296 (352)
T 2ism_A 266 QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLE 296 (352)
T ss_dssp TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEE
T ss_pred CCCCCcceEE-ECCEEEEEECCCCEEEEEEEC
Confidence 2234567787 366666665556667776664
No 309
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.44 E-value=0.018 Score=65.87 Aligned_cols=205 Identities=10% Similarity=-0.032 Sum_probs=119.1
Q ss_pred CceEEEEECCCCCEEE-EEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEEE
Q psy14440 388 QQVTCAEISEDVSILA-VGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKL 466 (711)
Q Consensus 388 ~~V~~l~fs~dg~~La-tG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l 466 (711)
.....++|++.+..|. +-...+.|..+++++... ....+........++
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~------------------------------~~~v~~~~~~~P~Gl 89 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES------------------------------VQNVVVSGLLSPDGL 89 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----------------------------------CEEEECSSCSCEEEE
T ss_pred CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCc------------------------------eEEEEeCCCCCcCeE
Confidence 4567888887555444 333456677666643210 011122222467899
Q ss_pred EEcCCCCEEEEE-eCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEEC--CCeEEEEECCCCceeEEeecC
Q psy14440 467 SFSPDRSLLLSC-SQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGH--DRMARLWATDSYHPLRLFVGH 543 (711)
Q Consensus 467 ~fspdg~~L~s~-s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~--Dg~i~lwd~~~~~~~~~~~~h 543 (711)
++...++.|+.+ ...+.|.+.++.................+|++.|.+.++..+.. .+.|...+++...........
T Consensus 90 AvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~ 169 (619)
T 3s94_A 90 ACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSE 169 (619)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSS
T ss_pred EEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCC
Confidence 999866655554 55788999999765443444344455678999986555554443 467777777754444444344
Q ss_pred CCCeeEEEEcCCCCEEEEEE-cCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEE
Q psy14440 544 YSDVDCVQFHPNSNYVATGS-SDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLT 622 (711)
Q Consensus 544 ~~~V~~v~~sp~~~~latgs-~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~ 622 (711)
......+++++++..|+.+. ..+.|..+|+..........+.......|++..+ ...++-...+.|...|..+|+...
T Consensus 170 ~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~ 248 (619)
T 3s94_A 170 IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLR 248 (619)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCE
T ss_pred CCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcccE
Confidence 56678999998766665554 4678999998654333222222223346677644 333344456789999987775443
Q ss_pred E
Q psy14440 623 L 623 (711)
Q Consensus 623 ~ 623 (711)
.
T Consensus 249 ~ 249 (619)
T 3s94_A 249 E 249 (619)
T ss_dssp E
T ss_pred E
Confidence 3
No 310
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.41 E-value=0.16 Score=58.18 Aligned_cols=164 Identities=17% Similarity=0.102 Sum_probs=106.4
Q ss_pred cCCEEEEEEcCCCCEEE-EEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcC-CCCEEEEEECCC--eEEEEECCCCc
Q psy14440 460 EGPVRKLSFSPDRSLLL-SCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSP-HGYYFASAGHDR--MARLWATDSYH 535 (711)
Q Consensus 460 ~~~V~~l~fspdg~~L~-s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp-~g~~l~sgs~Dg--~i~lwd~~~~~ 535 (711)
.+.+.++++...++.|+ +.+..+.|.+.++........+........+|++.| .|..+++-.... .|...+++...
T Consensus 388 ~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~ 467 (628)
T 4a0p_A 388 EIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTE 467 (628)
T ss_dssp CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCS
T ss_pred cCCcceEEeeccCCeEEEEcCCCCEEEEEECCCCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCC
Confidence 34678999998877655 555678899999874333333344456789999999 565555544333 56666776544
Q ss_pred eeEEeecCCCCeeEEEEcCCCCEEEEEEc-CCcEEEEECCCCcEEEEee-CCCCCeEEEEEecCCCEEEEEeCCCcEEEE
Q psy14440 536 PLRLFVGHYSDVDCVQFHPNSNYVATGSS-DRTIRLWDCVTGSHVRLLT-GHKAPVYALSFSVCGRFLASAGGDGNVHMW 613 (711)
Q Consensus 536 ~~~~~~~h~~~V~~v~~sp~~~~latgs~-Dg~I~iwD~~~~~~v~~~~-~h~~~I~~la~spdg~~Lasgs~Dg~I~iw 613 (711)
............+.+++++.++.|+.+.. .+.|..+|+.. ...+.+. ........|++.. +..+++-...+.|...
T Consensus 468 ~~~l~~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG-~~r~~~~~~~~~~P~glav~~-~~ly~tD~~~~~i~~~ 545 (628)
T 4a0p_A 468 REVLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLSG-ANRIVLEDSNILQPVGLTVFE-NWLYWIDKQQQMIEKI 545 (628)
T ss_dssp CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEECSSCSCEEEEEEET-TEEEEEETTTTEEEEE
T ss_pred cEEEEeccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCC-CceEEEEcCCCCCcEEEEEEC-CEEEEEECCCCeEEEE
Confidence 44444444567789999998777776654 57899999854 3344443 3344567777754 4444444455678888
Q ss_pred ECCCCeEEEEee
Q psy14440 614 DLSNGHLLTLLT 625 (711)
Q Consensus 614 Dl~sg~~i~~l~ 625 (711)
|..+|+....+.
T Consensus 546 ~k~~G~~~~~i~ 557 (628)
T 4a0p_A 546 DMTGREGRTKVQ 557 (628)
T ss_dssp ETTSSSCCEEEE
T ss_pred ECcCCCCcEEEe
Confidence 877776555444
No 311
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.40 E-value=0.0095 Score=61.12 Aligned_cols=181 Identities=14% Similarity=0.181 Sum_probs=95.2
Q ss_pred CCCEEEEEeCC-----CeEEEEECCCCeEEEE--EecCCCCEEEEEEcCCCCEEEEEECCC-----eEEEEECCCCceeE
Q psy14440 471 DRSLLLSCSQD-----NTIRLWSLLLWRCLVV--YKGHGHPVWDIKFSPHGYYFASAGHDR-----MARLWATDSYHPLR 538 (711)
Q Consensus 471 dg~~L~s~s~D-----g~V~iwdl~t~~~~~~--~~~h~~~V~~v~~sp~g~~l~sgs~Dg-----~i~lwd~~~~~~~~ 538 (711)
++..++.|+.+ ..+.+||..+.+-... +.........+.+ +++.++.|+.++ .+.+||..+.+=..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 56666676654 3588899876543222 2111111222222 567777777553 57788887653222
Q ss_pred E--eecCCCCeeEEEEcCCCCEEEEEEcC-------CcEEEEECCCCcEEEE--eeCCCCCeEEEEEecCCCEEEEEeCC
Q psy14440 539 L--FVGHYSDVDCVQFHPNSNYVATGSSD-------RTIRLWDCVTGSHVRL--LTGHKAPVYALSFSVCGRFLASAGGD 607 (711)
Q Consensus 539 ~--~~~h~~~V~~v~~sp~~~~latgs~D-------g~I~iwD~~~~~~v~~--~~~h~~~I~~la~spdg~~Lasgs~D 607 (711)
. +...... .+++.. +++.++.|+.+ ..+.+||..+++-... +........++. -++++++.|+.+
T Consensus 139 ~~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~ 214 (302)
T 2xn4_A 139 VAPMNTRRSS-VGVGVV-GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGV--LNNLLYAVGGHD 214 (302)
T ss_dssp ECCCSSCCBS-CEEEEE-TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBS
T ss_pred cCCCCCcccC-ceEEEE-CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEE--ECCEEEEECCCC
Confidence 1 1111111 222222 56666666542 3588999887653332 111112222222 267777787764
Q ss_pred -----CcEEEEECCCCeEEEEe--eCCCCCEEEEEEeCCCCEEEEEeCCC-----cEEEEeCCC
Q psy14440 608 -----GNVHMWDLSNGHLLTLL--TGHTDVVRALCFSRDGNILASSGQDC-----SVKLWDFAK 659 (711)
Q Consensus 608 -----g~I~iwDl~sg~~i~~l--~~h~~~V~sl~fspdg~~Lasgs~Dg-----~V~iWdl~~ 659 (711)
..+.+||+.+.+-...- ....... +++ .-++++++.||.++ .|.+||+.+
T Consensus 215 ~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~-~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~ 276 (302)
T 2xn4_A 215 GPLVRKSVEVYDPTTNAWRQVADMNMCRRNA-GVC-AVNGLLYVVGGDDGSCNLASVEYYNPTT 276 (302)
T ss_dssp SSSBCCCEEEEETTTTEEEEECCCSSCCBSC-EEE-EETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred CCcccceEEEEeCCCCCEeeCCCCCCccccC-eEE-EECCEEEEECCcCCCcccccEEEEcCCC
Confidence 36999999887643322 1111111 122 22677888888664 488888765
No 312
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.38 E-value=0.22 Score=53.50 Aligned_cols=247 Identities=10% Similarity=0.097 Sum_probs=162.0
Q ss_pred CCeEEEEeCCCCce-eee-------ccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEe
Q psy14440 408 ESYIKLWSLVPQKL-KAM-------KSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCS 479 (711)
Q Consensus 408 dg~I~vWdl~~~~~-~~~-------~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s 479 (711)
+..|.|-|+....- ... ..++....++... ...++++|..+...++.+.-.. .|.--.|-.+. .|+-.+
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis~~-~l~lVT 123 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLN-TVALVT 123 (494)
T ss_dssp CCEEEEEETTSTTSCEEEECCCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEETT-EEEEEC
T ss_pred CCeEEEEECCCCCcceecccccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecCCC-eEEEEc
Confidence 34677888765321 111 1122233444443 7889999999998888877544 56677786544 444443
Q ss_pred CCCeEEEEECCC-CeEEEEEecC----CCCEEEEEEcCCCCEEEEEE-------CCCeEEEEECCCCceeEEeecCCCCe
Q psy14440 480 QDNTIRLWSLLL-WRCLVVYKGH----GHPVWDIKFSPHGYYFASAG-------HDRMARLWATDSYHPLRLFVGHYSDV 547 (711)
Q Consensus 480 ~Dg~V~iwdl~t-~~~~~~~~~h----~~~V~~v~~sp~g~~l~sgs-------~Dg~i~lwd~~~~~~~~~~~~h~~~V 547 (711)
+..|+-|++.. ......+..| +..|..-..+++.++++..| -.|.+.+|+.+.+ ..+.+.||.+..
T Consensus 124 -~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F 201 (494)
T 1bpo_A 124 -DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASF 201 (494)
T ss_dssp -SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEE
T ss_pred -CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeee
Confidence 35699999964 3556666655 45677777888888877654 2477889998864 456677876655
Q ss_pred eEEEEcCCC---CEEEEEEc---CCcEEEEECCCC---------cEEEEeeC---CCCCeEEEEEecCCCEEEEEeCCCc
Q psy14440 548 DCVQFHPNS---NYVATGSS---DRTIRLWDCVTG---------SHVRLLTG---HKAPVYALSFSVCGRFLASAGGDGN 609 (711)
Q Consensus 548 ~~v~~sp~~---~~latgs~---Dg~I~iwD~~~~---------~~v~~~~~---h~~~I~~la~spdg~~Lasgs~Dg~ 609 (711)
..+.+..+. ..++.+.. .+.++|.++... +.+..+.. -..--.++..|+....++.-+.-|.
T Consensus 202 ~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~ 281 (494)
T 1bpo_A 202 AQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY 281 (494)
T ss_dssp EEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSE
T ss_pred EEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCce
Confidence 544443221 23333433 278899988532 11112211 2334567888888888999999999
Q ss_pred EEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 610 VHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 610 I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
|++||+.+|.++..-+-....|..-+-+.+..=++.....|.|.--.++.
T Consensus 282 i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e 331 (494)
T 1bpo_A 282 IHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 331 (494)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECT
T ss_pred EEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEcc
Confidence 99999999999988887777777766666656666667888877766654
No 313
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.38 E-value=0.018 Score=61.02 Aligned_cols=161 Identities=14% Similarity=0.202 Sum_probs=98.8
Q ss_pred CCEEEEEEcC--CCC-EEEEEe-C--CCeEEEEECCCC--e--EEEEEecC-CCCEEEEEEcCCCCEEEEEEC-------
Q psy14440 461 GPVRKLSFSP--DRS-LLLSCS-Q--DNTIRLWSLLLW--R--CLVVYKGH-GHPVWDIKFSPHGYYFASAGH------- 522 (711)
Q Consensus 461 ~~V~~l~fsp--dg~-~L~s~s-~--Dg~V~iwdl~t~--~--~~~~~~~h-~~~V~~v~~sp~g~~l~sgs~------- 522 (711)
.....+.+.. ++. +|+++. . +.+|.+|++... . .+..+.+. -...+++.+.++|.+.++...
T Consensus 112 f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~ 191 (355)
T 3sre_A 112 FNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYL 191 (355)
T ss_dssp CCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHH
T ss_pred eeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCccc
Confidence 4566777655 344 454443 2 467888877542 2 23334332 345789999999987776541
Q ss_pred ----------CCeEEEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEE-cCCcEEEEECCC-CcE--EEEeeCCCCC
Q psy14440 523 ----------DRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGS-SDRTIRLWDCVT-GSH--VRLLTGHKAP 588 (711)
Q Consensus 523 ----------Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs-~Dg~I~iwD~~~-~~~--v~~~~~h~~~ 588 (711)
.|.+..++. ++ ++.+......-+.++|+|++++|+.+. ..+.|..||+.. ++. .+.+. ..+.
T Consensus 192 ~~~e~~~~~~~g~vyr~d~--~~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g~ 267 (355)
T 3sre_A 192 KSWEMHLGLAWSFVTYYSP--ND-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-FDTL 267 (355)
T ss_dssp HHHHHHTTCCCEEEEEECT--TC-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSE
T ss_pred ccchhhccCCccEEEEEEC--Ce-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-CCCC
Confidence 234444444 33 333444445678999999998877765 478899999863 332 23442 3466
Q ss_pred eEEEEEec-CCCEEEEEeCC-CcEEEEECC--CCeEEEEee
Q psy14440 589 VYALSFSV-CGRFLASAGGD-GNVHMWDLS--NGHLLTLLT 625 (711)
Q Consensus 589 I~~la~sp-dg~~Lasgs~D-g~I~iwDl~--sg~~i~~l~ 625 (711)
...+++.. +|++.+++..+ +.|..||-. .+..+..++
T Consensus 268 PDGi~vD~e~G~lwva~~~~g~~v~~~~P~~~~~s~v~rI~ 308 (355)
T 3sre_A 268 VDNISVDPVTGDLWVGCHPNGMRIFFYDAENPPGSEVLRIQ 308 (355)
T ss_dssp EEEEEECTTTCCEEEEEESCHHHHHSCCTTSCCCEEEEEEE
T ss_pred CceEEEeCCCCcEEEEecCCceEEEEECCCCCCCCEEEEEE
Confidence 78899999 59987767644 355555543 255555554
No 314
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.34 E-value=0.009 Score=61.43 Aligned_cols=181 Identities=10% Similarity=0.092 Sum_probs=96.3
Q ss_pred CCCEEEEEeCC----CeEEEEECCCCeEEEE--EecCCCCEEEEEEcCCCCEEEEEECC------CeEEEEECCCCceeE
Q psy14440 471 DRSLLLSCSQD----NTIRLWSLLLWRCLVV--YKGHGHPVWDIKFSPHGYYFASAGHD------RMARLWATDSYHPLR 538 (711)
Q Consensus 471 dg~~L~s~s~D----g~V~iwdl~t~~~~~~--~~~h~~~V~~v~~sp~g~~l~sgs~D------g~i~lwd~~~~~~~~ 538 (711)
++..++.|+.+ ..+.+||..+.+-... +.........+.+ +++.++.|+.+ ..+.+||..+.+=..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 56666777654 5688999876543222 2211111222222 56677777765 458889988754222
Q ss_pred E--eecCCCCeeEEEEcCCCCEEEEEEc---------CCcEEEEECCCCcEEEEee--CCCCCeEEEEEecCCCEEEEEe
Q psy14440 539 L--FVGHYSDVDCVQFHPNSNYVATGSS---------DRTIRLWDCVTGSHVRLLT--GHKAPVYALSFSVCGRFLASAG 605 (711)
Q Consensus 539 ~--~~~h~~~V~~v~~sp~~~~latgs~---------Dg~I~iwD~~~~~~v~~~~--~h~~~I~~la~spdg~~Lasgs 605 (711)
. +....... +++.. +++.++.|+. -..+.+||..+.+-...-. .....-..+. -++++++.|+
T Consensus 133 ~~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG 208 (306)
T 3ii7_A 133 KPSMLTQRCSH-GMVEA-NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVF--VKDKIFAVGG 208 (306)
T ss_dssp ECCCSSCCBSC-EEEEE-TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECC
T ss_pred CCCCcCCccee-EEEEE-CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEE--ECCEEEEEeC
Confidence 1 11111111 22222 5666666653 3458899998775332211 1111122222 2677777776
Q ss_pred CC-----CcEEEEECCCCeEEEE--eeCCCCCEEEEEEeCCCCEEEEEeCC-----CcEEEEeCCC
Q psy14440 606 GD-----GNVHMWDLSNGHLLTL--LTGHTDVVRALCFSRDGNILASSGQD-----CSVKLWDFAK 659 (711)
Q Consensus 606 ~D-----g~I~iwDl~sg~~i~~--l~~h~~~V~sl~fspdg~~Lasgs~D-----g~V~iWdl~~ 659 (711)
.+ ..|.+||+.+.+-... +.........+.+ ++.+++.||.+ ..|.+||+.+
T Consensus 209 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 209 QNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTET 272 (306)
T ss_dssp EETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTT
T ss_pred CCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCC
Confidence 53 3689999988754322 2111122222222 67788888855 4578888765
No 315
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.33 E-value=0.088 Score=55.65 Aligned_cols=195 Identities=12% Similarity=0.051 Sum_probs=107.5
Q ss_pred cCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe-EEEEEe---cCCCCEEEEEEcCC---CCEEEEEEC----C----C
Q psy14440 460 EGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWR-CLVVYK---GHGHPVWDIKFSPH---GYYFASAGH----D----R 524 (711)
Q Consensus 460 ~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~-~~~~~~---~h~~~V~~v~~sp~---g~~l~sgs~----D----g 524 (711)
-....+++|.++|+ |+++..+|.|++++ .+++ .+..+. ........|+++|+ +..|.++.. + +
T Consensus 28 l~~P~~ia~~pdG~-l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 28 LEVPWSIAPLGGGR-YLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp CSCEEEEEEEETTE-EEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCCeEEEEcCCCe-EEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 34568999999997 55556679999997 3454 222111 12346889999997 444444332 3 5
Q ss_pred eEEEEECCCC--c---eeEE---ee-cCCCCeeEEEEcCCCCEEEEEEc-------------CCcEEEEECCCC------
Q psy14440 525 MARLWATDSY--H---PLRL---FV-GHYSDVDCVQFHPNSNYVATGSS-------------DRTIRLWDCVTG------ 576 (711)
Q Consensus 525 ~i~lwd~~~~--~---~~~~---~~-~h~~~V~~v~~sp~~~~latgs~-------------Dg~I~iwD~~~~------ 576 (711)
.|..|+.... . .... +. +.......++|.|+|.++++.+. .|.|.-+|....
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~np 185 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNP 185 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCC
Confidence 6777776643 1 1111 21 11112467999999987666432 145555554321
Q ss_pred --cEEEEeeCCCCCeEEEEEec-CCCEEEEEeCCC---cEEEEECCCCe------------------EEEEeeCCCCCEE
Q psy14440 577 --SHVRLLTGHKAPVYALSFSV-CGRFLASAGGDG---NVHMWDLSNGH------------------LLTLLTGHTDVVR 632 (711)
Q Consensus 577 --~~v~~~~~h~~~I~~la~sp-dg~~Lasgs~Dg---~I~iwDl~sg~------------------~i~~l~~h~~~V~ 632 (711)
.....-.++.. ...++|++ +|+++++-...+ .|.+.. .|. .+..+........
T Consensus 186 f~~~~i~a~G~rn-p~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~ 262 (354)
T 3a9g_A 186 FPNSPIWSYGHRN-PQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPS 262 (354)
T ss_dssp STTCCEEEECCSC-CCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEE
T ss_pred CCCCcEEEEccCC-cceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCc
Confidence 01111234443 45799999 666555433222 233332 221 2222211224577
Q ss_pred EEEEe-------CCCCEEEEEeCCCcEEEEeCCC
Q psy14440 633 ALCFS-------RDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 633 sl~fs-------pdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
.++|. .+|+++++.-..+.|...++..
T Consensus 263 G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~ 296 (354)
T 3a9g_A 263 GASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGD 296 (354)
T ss_dssp EEEECCSSSCGGGTTEEEEEETTTTEEEEEEECG
T ss_pred ceEEECCCCCcccCCcEEEEEcCCCEEEEEEECC
Confidence 88884 4677777666667787777753
No 316
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.31 E-value=0.21 Score=51.65 Aligned_cols=224 Identities=12% Similarity=0.169 Sum_probs=142.9
Q ss_pred EcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCC-CceeEEeecC---
Q psy14440 468 FSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDS-YHPLRLFVGH--- 543 (711)
Q Consensus 468 fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~-~~~~~~~~~h--- 543 (711)
.+|..+.|+.-. ..++.+||+++.+.+..+.- ...|.-=+|-... .++..+ +..|+-|+++. ..+.+.|..|
T Consensus 74 MnP~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L 149 (365)
T 2xzh_A 74 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSL 149 (365)
T ss_dssp ECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSSS-EEEEEE-SSEEEEEESSTTCCCEEEEECCGGG
T ss_pred eCCCccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCCC-eEEEEc-CCcEEEEcccCCCCCceeeecchhc
Confidence 467776666554 57899999999999998875 4577677776544 555554 46899999974 4677777765
Q ss_pred -CCCeeEEEEcCCCCEEEEEEc-------CCcEEEEECCCCcEEEEeeCCCCCeEEEEEecC---CCEEEEEeC---CCc
Q psy14440 544 -YSDVDCVQFHPNSNYVATGSS-------DRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVC---GRFLASAGG---DGN 609 (711)
Q Consensus 544 -~~~V~~v~~sp~~~~latgs~-------Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spd---g~~Lasgs~---Dg~ 609 (711)
...|.....+++.++++..+- .|.+.+|.+..+ .-+.+.||.+....+.+..+ ...++.+.. .++
T Consensus 150 ~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~k 228 (365)
T 2xzh_A 150 AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGK 228 (365)
T ss_dssp TTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEE
T ss_pred ccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcE
Confidence 345777778888888765442 367889997655 45677788665544433211 113333322 258
Q ss_pred EEEEECCCC---------eEEEEee---CCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCCccCcccccccccccc
Q psy14440 610 VHMWDLSNG---------HLLTLLT---GHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADI 677 (711)
Q Consensus 610 I~iwDl~sg---------~~i~~l~---~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~ 677 (711)
++|.++... +.+..+- +..+---++..|..-.++..-+.-|.|++||+.+.......
T Consensus 229 LhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~n----------- 297 (365)
T 2xzh_A 229 LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMN----------- 297 (365)
T ss_dssp EEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEE-----------
T ss_pred EEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEe-----------
Confidence 999998442 1222221 12345568888888888999999999999999987654321
Q ss_pred ccccccceeeecccCCcceEEEEEccCCeeee
Q psy14440 678 KNSSLAYLVRSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 678 ~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
+.+.....+.+.....+.|.+|- ++|++|.
T Consensus 298 rIS~d~iF~ta~~~~~~Gi~~Vn--r~GqVl~ 327 (365)
T 2xzh_A 298 RISGETIFVTAPHEATAGIIGVN--RKGQVLS 327 (365)
T ss_dssp ECCSSCEEEEEEEGGGTEEEEEE--TTCEEEE
T ss_pred ccCCCceEEecccCCCCcEEEEc--CCCEEEE
Confidence 11223334445555555555554 5665553
No 317
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.28 E-value=0.23 Score=51.42 Aligned_cols=217 Identities=12% Similarity=0.116 Sum_probs=142.4
Q ss_pred CcEEEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEEEecC----CCCEEEEEEcCC
Q psy14440 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLL-WRCLVVYKGH----GHPVWDIKFSPH 513 (711)
Q Consensus 439 d~~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t-~~~~~~~~~h----~~~V~~v~~sp~ 513 (711)
...++++|..+...++.+.-. ..|.--.|-.+.. |+-.+ +..|+-|++.. ....+.+..| +..|..-..+++
T Consensus 86 g~~LQiFnletK~klks~~~~-e~VvfWkWis~~~-L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~ 162 (365)
T 2xzh_A 86 GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNT-VALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAK 162 (365)
T ss_dssp TTEEEEEETTTTEEEEEEECS-SCEEEEEECSSSE-EEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTT
T ss_pred CCeEEEechHHhhhhcceecC-CccEEEEecCCCe-EEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCC
Confidence 556777777777777776643 4677888875554 44433 34699999964 4556666655 456777777888
Q ss_pred CCEEEEEE-------CCCeEEEEECCCCceeEEeecCCCCeeEEEEcCC---CCEEEEEEc---CCcEEEEECCCC---c
Q psy14440 514 GYYFASAG-------HDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPN---SNYVATGSS---DRTIRLWDCVTG---S 577 (711)
Q Consensus 514 g~~l~sgs-------~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~---~~~latgs~---Dg~I~iwD~~~~---~ 577 (711)
.++++..| -.|.+.+|+.+.+ ..+.+.||.+....+.+..+ ...++.+.. .+.++|.++... .
T Consensus 163 ~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~ 241 (365)
T 2xzh_A 163 QKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN 241 (365)
T ss_dssp SCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTC
T ss_pred CCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCC
Confidence 88777655 2377889998864 45667777654433333221 113333332 258889888432 1
Q ss_pred ------EEEEeeC---CCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeC
Q psy14440 578 ------HVRLLTG---HKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQ 648 (711)
Q Consensus 578 ------~v~~~~~---h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~ 648 (711)
.+..+.. ...--.++..|.....+..-+.-|.|++||+.+|.++..-+--...|..-+-+.+..=++....
T Consensus 242 ~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr 321 (365)
T 2xzh_A 242 QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNR 321 (365)
T ss_dssp CCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEET
T ss_pred CCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcC
Confidence 1222222 1334557788888888888899999999999999999888877777766666555455666668
Q ss_pred CCcEEEEeCCC
Q psy14440 649 DCSVKLWDFAK 659 (711)
Q Consensus 649 Dg~V~iWdl~~ 659 (711)
.|.|.--.++.
T Consensus 322 ~GqVl~v~v~~ 332 (365)
T 2xzh_A 322 KGQVLSVCVEE 332 (365)
T ss_dssp TCEEEEEEECT
T ss_pred CCEEEEEEECc
Confidence 88877666654
No 318
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.23 E-value=0.036 Score=58.65 Aligned_cols=190 Identities=13% Similarity=0.155 Sum_probs=113.8
Q ss_pred EEEEEEcCCCCEEEEEe------------CCCeEEEEECCC--CeEE-EEEec-----CCCCEEEEEEcC--CCC-EEEE
Q psy14440 463 VRKLSFSPDRSLLLSCS------------QDNTIRLWSLLL--WRCL-VVYKG-----HGHPVWDIKFSP--HGY-YFAS 519 (711)
Q Consensus 463 V~~l~fspdg~~L~s~s------------~Dg~V~iwdl~t--~~~~-~~~~~-----h~~~V~~v~~sp--~g~-~l~s 519 (711)
.-.+...++|..+++++ .+|.|.++|..+ .+.. ..+.+ .......+.+.. ++. +|++
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 34566677775555542 689999999873 2221 12332 123566777655 353 4444
Q ss_pred EE-C--CCeEEEEECCCCc-e---eEEeec-CCCCeeEEEEcCCCCEEEEEEc-----------------CCcEEEEECC
Q psy14440 520 AG-H--DRMARLWATDSYH-P---LRLFVG-HYSDVDCVQFHPNSNYVATGSS-----------------DRTIRLWDCV 574 (711)
Q Consensus 520 gs-~--Dg~i~lwd~~~~~-~---~~~~~~-h~~~V~~v~~sp~~~~latgs~-----------------Dg~I~iwD~~ 574 (711)
+. . +.++.+|+++... . +..+.+ .....+.+.+.++|.++++... .|.|..+|.
T Consensus 132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~- 210 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP- 210 (355)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-
T ss_pred EECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC-
Confidence 43 3 4678888776532 2 223332 2345788999999988777541 234555554
Q ss_pred CCcEEEEeeCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCC-CeE--EEEeeCCCCCEEEEEEeC-CCCEEEEEeCC
Q psy14440 575 TGSHVRLLTGHKAPVYALSFSVCGRFLASAG-GDGNVHMWDLSN-GHL--LTLLTGHTDVVRALCFSR-DGNILASSGQD 649 (711)
Q Consensus 575 ~~~~v~~~~~h~~~I~~la~spdg~~Lasgs-~Dg~I~iwDl~s-g~~--i~~l~~h~~~V~sl~fsp-dg~~Lasgs~D 649 (711)
++. +.+...-..-+.++|||||++|+.+. ..++|..||+.. |+. ...+ ...+....+++.. +|++.+++..+
T Consensus 211 -~~~-~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 211 -NDV-RVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp -TCC-EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESC
T ss_pred -CeE-EEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCC
Confidence 433 33332334578999999999887765 567999999863 433 2233 2346678899999 59988877644
Q ss_pred -CcEEEEe
Q psy14440 650 -CSVKLWD 656 (711)
Q Consensus 650 -g~V~iWd 656 (711)
+.|..||
T Consensus 288 g~~v~~~~ 295 (355)
T 3sre_A 288 GMRIFFYD 295 (355)
T ss_dssp HHHHHSCC
T ss_pred ceEEEEEC
Confidence 3444443
No 319
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.20 E-value=0.23 Score=57.98 Aligned_cols=231 Identities=9% Similarity=0.038 Sum_probs=136.6
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEEE
Q psy14440 387 RQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKL 466 (711)
Q Consensus 387 ~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l 466 (711)
...|+|+.-..+|. |..|+.+| +..||-. +...... .. ......|.++
T Consensus 21 ~n~V~~I~qD~~G~-lWigT~~G-L~ryDG~--~~~~~~~---------------------~~-------~~~~~~i~~i 68 (758)
T 3ott_A 21 ASVVSCFLQDSEGL-IWIGSNKG-LFSYDGY--STQQHFT---------------------YG-------ENNNTRIYCG 68 (758)
T ss_dssp CCCEEEEEECTTSC-EEEEESSC-EEEECSS--CEEECSC---------------------TT-------STTSSCEEEE
T ss_pred cceEEEEEECCCCC-EEEEECCC-ccccCCC--ceEEEEc---------------------cC-------CCCCceEEEE
Confidence 56799999988885 45667777 4455531 1111000 00 0123458888
Q ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEee----c
Q psy14440 467 SFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFV----G 542 (711)
Q Consensus 467 ~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~----~ 542 (711)
....+| .|..|+.+| +..||..+.+...........|.++... +| .+..++.+ -+..++..+++...... .
T Consensus 69 ~~d~~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~~-~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l 143 (758)
T 3ott_A 69 VIIDNT-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMALQ-GD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGL 143 (758)
T ss_dssp EEETTT-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEEE-TT-EEEEEETT-EEEEEETTTCCEEEECHHHHCC
T ss_pred EEcCCC-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEec-CC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCc
Confidence 777665 566777666 8899988764332111123357776543 44 56667666 57888887655332201 1
Q ss_pred CCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeC-----CCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy14440 543 HYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTG-----HKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617 (711)
Q Consensus 543 h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~-----h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~s 617 (711)
....|.++....++++.+ |+.+ -|..||..+++....... ....|.++....++..|..|+. +.|..+|..+
T Consensus 144 ~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~ 220 (758)
T 3ott_A 144 PNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPST 220 (758)
T ss_dssp SCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTT
T ss_pred CCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCC
Confidence 234588888877766544 5544 477888777654322111 1234888888887776666664 4688899887
Q ss_pred CeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 618 GHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 618 g~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
++...........|.++....+|.+.+ |+. +-|.+++..+
T Consensus 221 ~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~-~Gl~~~~~~~ 260 (758)
T 3ott_A 221 GQIKQTEAFHNNSIKSLALDGNGDLLA-GTD-NGLYVYHNDT 260 (758)
T ss_dssp TEEEEEEEEEEEEEEEEEECTTCCEEE-EET-TEEEEECCTT
T ss_pred CeEEeccCCCCCeEEEEEEcCCCCEEE-EeC-CceeEEecCC
Confidence 764322111234588888887887665 444 4577787654
No 320
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.20 E-value=0.35 Score=51.97 Aligned_cols=248 Identities=12% Similarity=0.165 Sum_probs=156.3
Q ss_pred cEEEEEecCCCeeE-EEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEE
Q psy14440 440 ILVRIMDERNAETT-RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFA 518 (711)
Q Consensus 440 ~~i~i~d~~~~~~~-~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~ 518 (711)
..+.+.|..++... +.-..-. +.-.+|..+.|+.=. ..++.|||+++...+..+.- ...|.-=.|-... .++
T Consensus 48 ~~vvIiDl~~~~~~~rrpi~Ad----sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~-~e~VvfWkWis~~-~l~ 120 (494)
T 1bpo_A 48 AQVVIIDMNDPSNPIRRPISAD----SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVA 120 (494)
T ss_dssp CEEEEEETTSTTSCEEEECCCS----EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEETT-EEE
T ss_pred CeEEEEECCCCCcceecccccc----eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceec-CCCceEEEecCCC-eEE
Confidence 36677777665443 2222212 334567776666554 67899999999999988875 3455556665443 555
Q ss_pred EEECCCeEEEEECCC-CceeEEeecC----CCCeeEEEEcCCCCEEEEEE-------cCCcEEEEECCCCcEEEEeeCCC
Q psy14440 519 SAGHDRMARLWATDS-YHPLRLFVGH----YSDVDCVQFHPNSNYVATGS-------SDRTIRLWDCVTGSHVRLLTGHK 586 (711)
Q Consensus 519 sgs~Dg~i~lwd~~~-~~~~~~~~~h----~~~V~~v~~sp~~~~latgs-------~Dg~I~iwD~~~~~~v~~~~~h~ 586 (711)
..+ +..|+-|+++. ..+.+.|..| ...|.....+++.++++..+ -.|.+.+|.+..+. -+.+.||.
T Consensus 121 lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGha 198 (494)
T 1bpo_A 121 LVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHA 198 (494)
T ss_dssp EEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-EEEECCSE
T ss_pred EEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-cchheeee
Confidence 554 56899999974 4677777765 34577778888899877543 24678899987654 56778887
Q ss_pred CCeEEEEEecCC---CEEEEEeC---CCcEEEEECCCC--------eEEEEe-e---CCCCCEEEEEEeCCCCEEEEEeC
Q psy14440 587 APVYALSFSVCG---RFLASAGG---DGNVHMWDLSNG--------HLLTLL-T---GHTDVVRALCFSRDGNILASSGQ 648 (711)
Q Consensus 587 ~~I~~la~spdg---~~Lasgs~---Dg~I~iwDl~sg--------~~i~~l-~---~h~~~V~sl~fspdg~~Lasgs~ 648 (711)
+....+.+..+. ..++.+.. .++++|.++... +....+ - ...+--.++..|+.-.++..-+.
T Consensus 199 a~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK 278 (494)
T 1bpo_A 199 ASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITK 278 (494)
T ss_dssp EEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEET
T ss_pred eeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEec
Confidence 665555443221 23443433 278999998542 111121 1 12345568888988888999999
Q ss_pred CCcEEEEeCCCCCCccCccccccccccccccccccceeeecccCCcceEEEEEccCCeeee
Q psy14440 649 DCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 649 Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
-|.|++||+.+....... +.+.....+.+.....+.|.+|- ++|++|.
T Consensus 279 ~G~i~lyDleTgt~i~~n-----------rIs~~~iF~t~~~~~~~Gi~~Vn--r~GqVl~ 326 (494)
T 1bpo_A 279 YGYIHLYDLETGTCIYMN-----------RISGETIFVTAPHEATAGIIGVN--RKGQVLS 326 (494)
T ss_dssp TSEEEEEETTTCCEEEEE-----------ECCSSCEEEEEEETTTTEEEEEE--TTCEEEE
T ss_pred CceEEEEecccceeeeee-----------cccCCceEEecccCCCCcEEEEc--cCceEEE
Confidence 999999999987654321 11233444555555556665554 6666553
No 321
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.08 E-value=0.5 Score=51.66 Aligned_cols=122 Identities=11% Similarity=0.079 Sum_probs=66.1
Q ss_pred eEEEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEee
Q psy14440 378 IACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLV 457 (711)
Q Consensus 378 ~~~~tl~~h~~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~ 457 (711)
.....+...-..-++++|.+||+++++-...+.|++++..+.....+. +..... ...
T Consensus 17 f~~~~~a~~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~--------------------~~~~~~---~~~ 73 (454)
T 1cru_A 17 FDKKVILSNLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVF--------------------QVPEIV---NDA 73 (454)
T ss_dssp SCEEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE--------------------ECTTCC---CCT
T ss_pred eEEEEEECCCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEe--------------------cCCccc---ccc
Confidence 334444444567889999999998877654456777765332221110 000000 000
Q ss_pred cccCCEEEEEEcCC---CCEEEEEeC-------------CCeEEEEECCCC-------eEEE-EEe-cCCCCEEEEEEcC
Q psy14440 458 GHEGPVRKLSFSPD---RSLLLSCSQ-------------DNTIRLWSLLLW-------RCLV-VYK-GHGHPVWDIKFSP 512 (711)
Q Consensus 458 ~h~~~V~~l~fspd---g~~L~s~s~-------------Dg~V~iwdl~t~-------~~~~-~~~-~h~~~V~~v~~sp 512 (711)
...+....|+|+|+ +..|+.+.. ...|.-|++... +.+. .+. ...+....|+|.+
T Consensus 74 ~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p 153 (454)
T 1cru_A 74 DGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP 153 (454)
T ss_dssp TSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT
T ss_pred CCCCceeEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC
Confidence 12456788999985 555554432 134555554321 1111 122 1234578999999
Q ss_pred CCCEEEEEEC
Q psy14440 513 HGYYFASAGH 522 (711)
Q Consensus 513 ~g~~l~sgs~ 522 (711)
+|+++++.+.
T Consensus 154 DG~Lyv~~Gd 163 (454)
T 1cru_A 154 DQKIYYTIGD 163 (454)
T ss_dssp TSCEEEEECC
T ss_pred CCeEEEEECC
Confidence 9987776553
No 322
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.07 E-value=0.027 Score=57.53 Aligned_cols=144 Identities=15% Similarity=0.145 Sum_probs=77.8
Q ss_pred CCCEEEEEeCC-----CeEEEEECCCCe--EEEEEecCCCCEEEEEEcCCCCEEEEEECC-----CeEEEEECCCCceeE
Q psy14440 471 DRSLLLSCSQD-----NTIRLWSLLLWR--CLVVYKGHGHPVWDIKFSPHGYYFASAGHD-----RMARLWATDSYHPLR 538 (711)
Q Consensus 471 dg~~L~s~s~D-----g~V~iwdl~t~~--~~~~~~~h~~~V~~v~~sp~g~~l~sgs~D-----g~i~lwd~~~~~~~~ 538 (711)
++..++.|+.+ ..+.+||+.+.+ .+............+.+ +++.++.|+.+ ..+.+||..+.+=..
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 189 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTN 189 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEe
Confidence 56667777643 358899987644 33322211111222222 56677777754 458888987653222
Q ss_pred E--eecCCCCeeEEEEcCCCCEEEEEEcC-----CcEEEEECCCCcEEEEeeC--CCCCeEEEEEecCCCEEEEEeCC--
Q psy14440 539 L--FVGHYSDVDCVQFHPNSNYVATGSSD-----RTIRLWDCVTGSHVRLLTG--HKAPVYALSFSVCGRFLASAGGD-- 607 (711)
Q Consensus 539 ~--~~~h~~~V~~v~~sp~~~~latgs~D-----g~I~iwD~~~~~~v~~~~~--h~~~I~~la~spdg~~Lasgs~D-- 607 (711)
. +........++.+ ++..++.|+.+ ..|.+||..+.+-...-.. ......++. -++++++.|+.+
T Consensus 190 ~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~ 265 (301)
T 2vpj_A 190 VTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV--LRGRLYAIAGYDGN 265 (301)
T ss_dssp ECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSS
T ss_pred CCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEE--ECCEEEEEcCcCCC
Confidence 1 1111111222322 56677777654 4689999987754332211 111222222 367777777765
Q ss_pred ---CcEEEEECCCCeE
Q psy14440 608 ---GNVHMWDLSNGHL 620 (711)
Q Consensus 608 ---g~I~iwDl~sg~~ 620 (711)
..|.+||+.+.+-
T Consensus 266 ~~~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 266 SLLSSIECYDPIIDSW 281 (301)
T ss_dssp SBEEEEEEEETTTTEE
T ss_pred cccccEEEEcCCCCeE
Confidence 3578889877653
No 323
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.92 E-value=0.049 Score=56.13 Aligned_cols=183 Identities=9% Similarity=0.040 Sum_probs=93.1
Q ss_pred cCCCCEEEEEeC----C-------CeEEEEECCCCeEEEE--EecCCCCEEEEEEcCCCCEEEEEECC--------CeEE
Q psy14440 469 SPDRSLLLSCSQ----D-------NTIRLWSLLLWRCLVV--YKGHGHPVWDIKFSPHGYYFASAGHD--------RMAR 527 (711)
Q Consensus 469 spdg~~L~s~s~----D-------g~V~iwdl~t~~~~~~--~~~h~~~V~~v~~sp~g~~l~sgs~D--------g~i~ 527 (711)
..++..++.|+. + ..+.+||..+.+-... +.........+.+ +++.++.|+.+ ..+.
T Consensus 43 ~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~ 120 (315)
T 4asc_A 43 TKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVM 120 (315)
T ss_dssp CTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEE
T ss_pred EECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEE
Confidence 346777777773 1 1277888876543221 1100111111222 56677777632 4588
Q ss_pred EEECCCCce--eEEeecCCCCeeEEEEcCCCCEEEEEEc-C-----CcEEEEECCCCcEEEEe--eCCCCCeEEEEEecC
Q psy14440 528 LWATDSYHP--LRLFVGHYSDVDCVQFHPNSNYVATGSS-D-----RTIRLWDCVTGSHVRLL--TGHKAPVYALSFSVC 597 (711)
Q Consensus 528 lwd~~~~~~--~~~~~~h~~~V~~v~~sp~~~~latgs~-D-----g~I~iwD~~~~~~v~~~--~~h~~~I~~la~spd 597 (711)
+||..+.+= +..+...... .+++. -+++.++.|+. + ..+.+||..+.+-...- ........++. -+
T Consensus 121 ~~d~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~ 196 (315)
T 4asc_A 121 CYDRLSFKWGESDPLPYVVYG-HTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATV--HD 196 (315)
T ss_dssp EEETTTTEEEECCCCSSCCBS-CEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ET
T ss_pred EECCCCCcEeECCCCCCcccc-eeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEE--EC
Confidence 888876531 1111111111 22222 35666677765 2 46899998876432221 11111122222 36
Q ss_pred CCEEEEEeCCC-----cEEEEECCCCeEEEEee--CCCCCEEEEEEeCCCCEEEEEeCCC--------------cEEEEe
Q psy14440 598 GRFLASAGGDG-----NVHMWDLSNGHLLTLLT--GHTDVVRALCFSRDGNILASSGQDC--------------SVKLWD 656 (711)
Q Consensus 598 g~~Lasgs~Dg-----~I~iwDl~sg~~i~~l~--~h~~~V~sl~fspdg~~Lasgs~Dg--------------~V~iWd 656 (711)
+++++.|+.++ .+.+||+.+.+-...-. ........+. -++++++.||.++ .|.+||
T Consensus 197 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd 274 (315)
T 4asc_A 197 GRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVS--LVGTLYAIGGFATLETESGELVPTELNDIWRYN 274 (315)
T ss_dssp TEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEE
T ss_pred CEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEE--ECCEEEEECCccccCcCCccccccccCcEEEec
Confidence 77888887654 58899998875433221 1111112222 2677888887642 366777
Q ss_pred CCC
Q psy14440 657 FAK 659 (711)
Q Consensus 657 l~~ 659 (711)
+.+
T Consensus 275 ~~~ 277 (315)
T 4asc_A 275 EEE 277 (315)
T ss_dssp TTT
T ss_pred CCC
Confidence 765
No 324
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.88 E-value=0.09 Score=56.39 Aligned_cols=139 Identities=15% Similarity=0.153 Sum_probs=94.5
Q ss_pred CCCEEEEEECCCeEEEEECCCCceeEEeecC----CCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCc-----------
Q psy14440 513 HGYYFASAGHDRMARLWATDSYHPLRLFVGH----YSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGS----------- 577 (711)
Q Consensus 513 ~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~h----~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~----------- 577 (711)
+|..++++- ++.||+.++......+.+... ...|..+..+|+|++||..+ +.+|.|..+-.+.
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHT
T ss_pred CCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccc
Confidence 444444443 467787777644444554432 34688999999999999986 6689998876321
Q ss_pred -EEEEeeC------CCCCeEEEEEecC---CCEEEEEeCCCcEEEEECCCC--eEEEEee---------CCCCCEEEEEE
Q psy14440 578 -HVRLLTG------HKAPVYALSFSVC---GRFLASAGGDGNVHMWDLSNG--HLLTLLT---------GHTDVVRALCF 636 (711)
Q Consensus 578 -~v~~~~~------h~~~I~~la~spd---g~~Lasgs~Dg~I~iwDl~sg--~~i~~l~---------~h~~~V~sl~f 636 (711)
..+.+.- ...+|..+.|+|- |..|++-..|+.|++||+... +.. .++ .....|.+++|
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~F 187 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEF 187 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEE
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEE
Confidence 1233332 2577999999995 568999999999999999752 122 222 22256889999
Q ss_pred eCCCCEEEEEe--CCCcEEE
Q psy14440 637 SRDGNILASSG--QDCSVKL 654 (711)
Q Consensus 637 spdg~~Lasgs--~Dg~V~i 654 (711)
..+|-.|...+ ..|.|+-
T Consensus 188 g~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 188 SKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp CTTSSCEEEEECTTSCEEEE
T ss_pred cCCCcEEEEEecCCCCCEEE
Confidence 99887666655 6777654
No 325
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.76 E-value=0.024 Score=58.41 Aligned_cols=181 Identities=12% Similarity=0.118 Sum_probs=93.2
Q ss_pred CCCEEEEEeC----C-----CeEEEEECCCCeEEEE--EecCCCCEEEEEEcCCCCEEEEEECC-----CeEEEEECCCC
Q psy14440 471 DRSLLLSCSQ----D-----NTIRLWSLLLWRCLVV--YKGHGHPVWDIKFSPHGYYFASAGHD-----RMARLWATDSY 534 (711)
Q Consensus 471 dg~~L~s~s~----D-----g~V~iwdl~t~~~~~~--~~~h~~~V~~v~~sp~g~~l~sgs~D-----g~i~lwd~~~~ 534 (711)
++..++.|+. + ..+.+||..+.+-... +.........+.+ +++.++.|+.+ ..+.+||..+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCC
Confidence 4555666554 2 4588888876542221 1111111222222 56677777643 35788888765
Q ss_pred ceeEE--eecCCCCeeEEEEcCCCCEEEEEEcC-----CcEEEEECCCCcEEEE--eeCCCCCeEEEEEecCCCEEEEEe
Q psy14440 535 HPLRL--FVGHYSDVDCVQFHPNSNYVATGSSD-----RTIRLWDCVTGSHVRL--LTGHKAPVYALSFSVCGRFLASAG 605 (711)
Q Consensus 535 ~~~~~--~~~h~~~V~~v~~sp~~~~latgs~D-----g~I~iwD~~~~~~v~~--~~~h~~~I~~la~spdg~~Lasgs 605 (711)
+=... +........++.+ ++..++.|+.+ ..+.+||..+.+-... +........++.+ ++++++.|+
T Consensus 148 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG 223 (308)
T 1zgk_A 148 EWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGG 223 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECC
T ss_pred eEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeC
Confidence 32111 1111111222332 56667777654 4588999877643221 1111122222332 677777777
Q ss_pred CC-----CcEEEEECCCCeEEEE--eeCCCCCEEEEEEeCCCCEEEEEeCC-----CcEEEEeCCC
Q psy14440 606 GD-----GNVHMWDLSNGHLLTL--LTGHTDVVRALCFSRDGNILASSGQD-----CSVKLWDFAK 659 (711)
Q Consensus 606 ~D-----g~I~iwDl~sg~~i~~--l~~h~~~V~sl~fspdg~~Lasgs~D-----g~V~iWdl~~ 659 (711)
.+ ..+.+||+.+.+-... +....... +++. -++++++.||.+ ..|.+||+.+
T Consensus 224 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 224 YDGQDQLNSVERYDVETETWTFVAPMKHRRSAL-GITV-HQGRIYVLGGYDGHTFLDSVECYDPDT 287 (308)
T ss_dssp BCSSSBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEE-ETTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred CCCCCccceEEEEeCCCCcEEECCCCCCCccce-EEEE-ECCEEEEEcCcCCCcccceEEEEcCCC
Confidence 64 4699999988764332 11111111 2222 267788888754 3467777754
No 326
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.75 E-value=0.07 Score=57.23 Aligned_cols=141 Identities=17% Similarity=0.193 Sum_probs=95.9
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEEecC----CCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCc----------
Q psy14440 470 PDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGH----GHPVWDIKFSPHGYYFASAGHDRMARLWATDSYH---------- 535 (711)
Q Consensus 470 pdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h----~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~---------- 535 (711)
.+|..++.+- ++.||.-++.....-+.++.. -..|..+..+|+|.++|..+ +.+|.|..+-.+.
T Consensus 30 ~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 30 QNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp TTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHH
T ss_pred cCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCccccccc
Confidence 4555565553 467888887644444444432 22578899999999999886 4678888775221
Q ss_pred --eeEEeec------CCCCeeEEEEcC---CCCEEEEEEcCCcEEEEECCCCc--EEEEee---------CCCCCeEEEE
Q psy14440 536 --PLRLFVG------HYSDVDCVQFHP---NSNYVATGSSDRTIRLWDCVTGS--HVRLLT---------GHKAPVYALS 593 (711)
Q Consensus 536 --~~~~~~~------h~~~V~~v~~sp---~~~~latgs~Dg~I~iwD~~~~~--~v~~~~---------~h~~~I~~la 593 (711)
..+.+.- ....|..+.||| ++..|++-..|++||+||+.... .. .+. .....|.+++
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~ 186 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLE 186 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEE
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEE
Confidence 1122221 256799999999 46789999999999999998632 11 221 2336789999
Q ss_pred EecCCCEEEEEe--CCCcEEEE
Q psy14440 594 FSVCGRFLASAG--GDGNVHMW 613 (711)
Q Consensus 594 ~spdg~~Lasgs--~Dg~I~iw 613 (711)
|..+|-.|...+ ..|.|+-.
T Consensus 187 Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 187 FSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ECTTSSCEEEEECTTSCEEEEE
T ss_pred EcCCCcEEEEEecCCCCCEEEE
Confidence 999887777655 77877644
No 327
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.72 E-value=1.7 Score=53.08 Aligned_cols=172 Identities=12% Similarity=0.096 Sum_probs=108.9
Q ss_pred eEEEEECCCCeEEEEEecC-CCCEEEEEE---cCC-CCEEEEEE----------CCCeEEEEECCCCceeEEee--cCCC
Q psy14440 483 TIRLWSLLLWRCLVVYKGH-GHPVWDIKF---SPH-GYYFASAG----------HDRMARLWATDSYHPLRLFV--GHYS 545 (711)
Q Consensus 483 ~V~iwdl~t~~~~~~~~~h-~~~V~~v~~---sp~-g~~l~sgs----------~Dg~i~lwd~~~~~~~~~~~--~h~~ 545 (711)
.|++.|-.+++.+..+.-. +..+.+++. ..+ ..+|++|+ ..|.|.+|++..++ ++.+. ...+
T Consensus 808 ~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~k-L~lv~~~~v~g 886 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGK-LQTVAEKEVKG 886 (1158)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTE-EEEEEEEEESS
T ss_pred EEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCE-EEEEEEEEcCC
Confidence 4778888888877766532 344555553 322 46888887 35789999987443 33221 2456
Q ss_pred CeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEE--ECCCCeEEEE
Q psy14440 546 DVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMW--DLSNGHLLTL 623 (711)
Q Consensus 546 ~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iw--Dl~sg~~i~~ 623 (711)
.|++++-- +| +|++|- .++|++||+...+.++.-..+-..|..+.....|+++++|+.-..|.++ +...++....
T Consensus 887 ~v~al~~~-~g-~Lla~i-g~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~ 963 (1158)
T 3ei3_A 887 AVYSMVEF-NG-KLLASI-NSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEI 963 (1158)
T ss_dssp CEEEEEEE-TT-EEEEEE-TTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEE
T ss_pred cCEEEeee-CC-EEEEEc-CCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEE
Confidence 78887643 45 555554 5789999998766554211111123333333457899999887777765 4445554433
Q ss_pred ee-CCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 624 LT-GHTDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 624 l~-~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
-+ .+...++++.|-.++ .++.+..+|.|.+.....
T Consensus 964 a~D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 964 ARDFNPNWMSAVEILDDD-NFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EECCSCBCEEEEEEEETT-EEEEEETTSEEEEEEECT
T ss_pred EeecccccEEEEEEEccC-cEEEEcCCCcEEEEecCC
Confidence 33 244678888887554 677789999999998765
No 328
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.69 E-value=0.12 Score=52.81 Aligned_cols=173 Identities=8% Similarity=0.053 Sum_probs=87.9
Q ss_pred cEEEEEecCCCeeEEEee--cccCCEEEEEEcCCCCEEEEEeCC------CeEEEEECCCCeEEEE--EecCCCCEEEEE
Q psy14440 440 ILVRIMDERNAETTRTLV--GHEGPVRKLSFSPDRSLLLSCSQD------NTIRLWSLLLWRCLVV--YKGHGHPVWDIK 509 (711)
Q Consensus 440 ~~i~i~d~~~~~~~~~l~--~h~~~V~~l~fspdg~~L~s~s~D------g~V~iwdl~t~~~~~~--~~~h~~~V~~v~ 509 (711)
..+.++|..+.+-...-. ........+.+ +++.++.|+.+ ..+.+||..+.+-... +.........+.
T Consensus 70 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~ 147 (306)
T 3ii7_A 70 KRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE 147 (306)
T ss_dssp CEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE
T ss_pred ceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE
Confidence 456677766654332211 11111122222 66677777765 4588999876543222 111111112222
Q ss_pred EcCCCCEEEEEEC---------CCeEEEEECCCCceeEE--eecCCCCeeEEEEcCCCCEEEEEEcC-----CcEEEEEC
Q psy14440 510 FSPHGYYFASAGH---------DRMARLWATDSYHPLRL--FVGHYSDVDCVQFHPNSNYVATGSSD-----RTIRLWDC 573 (711)
Q Consensus 510 ~sp~g~~l~sgs~---------Dg~i~lwd~~~~~~~~~--~~~h~~~V~~v~~sp~~~~latgs~D-----g~I~iwD~ 573 (711)
+ +++.++.|+. -..+.+||..+.+=... +...... .+++.. +++.++.|+.+ ..+.+||.
T Consensus 148 ~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~ 223 (306)
T 3ii7_A 148 A--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKN-HGLVFV-KDKIFAVGGQNGLGGLDNVEYYDI 223 (306)
T ss_dssp E--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBS-CEEEEE-TTEEEEECCEETTEEBCCEEEEET
T ss_pred E--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhc-ceEEEE-CCEEEEEeCCCCCCCCceEEEeeC
Confidence 2 5666676653 34588899887532211 1111111 222222 56666666543 46889998
Q ss_pred CCCcEEEE--eeCCCCCeEEEEEecCCCEEEEEeCC-----CcEEEEECCCCeE
Q psy14440 574 VTGSHVRL--LTGHKAPVYALSFSVCGRFLASAGGD-----GNVHMWDLSNGHL 620 (711)
Q Consensus 574 ~~~~~v~~--~~~h~~~I~~la~spdg~~Lasgs~D-----g~I~iwDl~sg~~ 620 (711)
.+.+-... +........++.+ ++++++.|+.+ ..|.+||+.+.+-
T Consensus 224 ~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W 275 (306)
T 3ii7_A 224 KLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDKW 275 (306)
T ss_dssp TTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTEE
T ss_pred CCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCeE
Confidence 87643222 1111222233333 67788888754 4688899887653
No 329
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.64 E-value=1.2 Score=51.94 Aligned_cols=225 Identities=11% Similarity=0.130 Sum_probs=130.8
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEEEE
Q psy14440 388 QQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLS 467 (711)
Q Consensus 388 ~~V~~l~fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~ 467 (711)
..|.++....+| .|.+|+.+| +..||..+.+... ........|.++.
T Consensus 63 ~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~-------------------------------~~~~~~~~i~~i~ 109 (758)
T 3ott_A 63 TRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQ-------------------------------PETDFPTDVRTMA 109 (758)
T ss_dssp SCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECC-------------------------------CSCCCCSCEEEEE
T ss_pred ceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEEC-------------------------------cccCCCceEEEEE
Confidence 457777766665 455666655 6777765433211 0000112466655
Q ss_pred EcCCCCEEEEEeCCCeEEEEECCCCeEEEEEe-----cCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEeec
Q psy14440 468 FSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYK-----GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVG 542 (711)
Q Consensus 468 fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~-----~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~ 542 (711)
. .+| .|..++.+ -|..||..+.+.. .+. .....|.++....+|.+.+ |+.+ -+..++..+++.......
T Consensus 110 ~-~~g-~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~ 183 (758)
T 3ott_A 110 L-QGD-TLWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEGIPLP 183 (758)
T ss_dssp E-ETT-EEEEEETT-EEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEEECCC
T ss_pred e-cCC-cEEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEEecCC
Confidence 4 244 56666666 5888998765543 331 1235688888887776544 5544 477788776543221111
Q ss_pred -----CCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy14440 543 -----HYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617 (711)
Q Consensus 543 -----h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~s 617 (711)
....|.++....++..|..|+. +-+..+|..+++...........|.++....+|.+.+ |+. +-|.++|..+
T Consensus 184 ~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~-~Gl~~~~~~~ 260 (758)
T 3ott_A 184 VHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTD-NGLYVYHNDT 260 (758)
T ss_dssp CCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EET-TEEEEECCTT
T ss_pred CccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeC-CceeEEecCC
Confidence 1224788888777776666664 4588899877654322111234588888887887654 444 4588899877
Q ss_pred CeEEEEeeC-------CCCCEEEEEEeCCCCEEEEEeCCCcEEEEe
Q psy14440 618 GHLLTLLTG-------HTDVVRALCFSRDGNILASSGQDCSVKLWD 656 (711)
Q Consensus 618 g~~i~~l~~-------h~~~V~sl~fspdg~~Lasgs~Dg~V~iWd 656 (711)
++....... ....|.++....+|++.+ |+..| +.++.
T Consensus 261 ~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi-GT~~G-l~~~~ 304 (758)
T 3ott_A 261 TPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWL-GTDYG-ISLSR 304 (758)
T ss_dssp SCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEE-EESSS-EEEEC
T ss_pred CcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEE-EeCCc-ccccc
Confidence 654322111 124689998888887554 44555 54443
No 330
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.62 E-value=0.041 Score=57.78 Aligned_cols=178 Identities=11% Similarity=-0.006 Sum_probs=96.1
Q ss_pred eCCCeEEEEECCCCeEEEEEec----CCCCEEE---EEE-----cCCCCEEEEEECCCeEEEEECCCCceeEEeecCCC-
Q psy14440 479 SQDNTIRLWSLLLWRCLVVYKG----HGHPVWD---IKF-----SPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYS- 545 (711)
Q Consensus 479 s~Dg~V~iwdl~t~~~~~~~~~----h~~~V~~---v~~-----sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~~h~~- 545 (711)
+.||.|..++..++.....+.. ...++.. ... +..+..+++|+.+|.+...|..+|+.+..+.....
T Consensus 64 ~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~ 143 (339)
T 2be1_A 64 FGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKN 143 (339)
T ss_dssp STTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBC
T ss_pred CCCCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCc
Confidence 6899999999888755544432 2222221 000 01345888999999999999999999988863211
Q ss_pred ------CeeEEEEc-----CCCCEEEEEEcCCcEEEEECCCCcEEEEe-----eCCCCC--e-EEEEEecCCCEEEEEeC
Q psy14440 546 ------DVDCVQFH-----PNSNYVATGSSDRTIRLWDCVTGSHVRLL-----TGHKAP--V-YALSFSVCGRFLASAGG 606 (711)
Q Consensus 546 ------~V~~v~~s-----p~~~~latgs~Dg~I~iwD~~~~~~v~~~-----~~h~~~--I-~~la~spdg~~Lasgs~ 606 (711)
...|.... -.+..|+.|..+..+.+.+ ++|+ +..+ ..+... + .+-..+.|+.+ +.++.
T Consensus 144 ~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~ 220 (339)
T 2be1_A 144 GYFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFR 220 (339)
T ss_dssp C--------------------CCEEEEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEET
T ss_pred ccccccccccccccccccccCCCeEEEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECC
Confidence 11122211 1245788888787777777 4553 2111 111000 0 00001124555 44677
Q ss_pred CCcEEEEECCCCeEEE-EeeCCCCCEE---E-----------EEEeC----------CCCEEEEEeCCCcEEEEeCCCC
Q psy14440 607 DGNVHMWDLSNGHLLT-LLTGHTDVVR---A-----------LCFSR----------DGNILASSGQDCSVKLWDFAKL 660 (711)
Q Consensus 607 Dg~I~iwDl~sg~~i~-~l~~h~~~V~---s-----------l~fsp----------dg~~Lasgs~Dg~V~iWdl~~~ 660 (711)
||.|.-+|..+|+.+. ... -.++|. . +.-.| +++.++..+.+|.+.-+..++.
T Consensus 221 dg~v~A~d~~~G~~~W~~~~-l~sPv~~~~dv~~~~~~g~~v~~~~P~~~~~~~~~~~~~v~v~~t~~G~~~Als~~~y 298 (339)
T 2be1_A 221 DKSLLASDLDFRIARWVSPT-FPGIIVGLFDVFNDLRTNENILVPHPFNPGDHESISSNKVYLDQTSNLSWFALSSQNF 298 (339)
T ss_dssp TTEEEEECSTTCCEEEECCC-CSSCEEEEEEEEEETTTTEEEEEECCCCC--------CCEEEEECTTCCEEEEETTTC
T ss_pred CCEEEEEECCCCcEEEEeec-CCCCeEEEEEEEEecCCCCEEEecCCCcccccccccCCeEEEEECCCCcEEEecCCCC
Confidence 8888888888887664 221 112221 1 11122 3455554677888888887654
No 331
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.61 E-value=0.068 Score=55.20 Aligned_cols=173 Identities=11% Similarity=0.080 Sum_probs=100.5
Q ss_pred EEcCCCCEEEEEeCC--------------CeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEE----CCCeEEE
Q psy14440 467 SFSPDRSLLLSCSQD--------------NTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAG----HDRMARL 528 (711)
Q Consensus 467 ~fspdg~~L~s~s~D--------------g~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs----~Dg~i~l 528 (711)
-++++|.+|+-+... ..|+..++...+....... . +..|++++.+|+... ....|+.
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~---~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~ 133 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPD---P--CIYASLIGNYIYYLHYDTQTATSLYR 133 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECS---C--EEEEEEETTEEEEEEESSSSCEEEEE
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecC---C--ccEEEEeCCEEEEEeecCCCCceEEE
Confidence 446677777666542 4677778776653333221 2 235677888888765 3445666
Q ss_pred EECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEc-CCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCC
Q psy14440 529 WATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSS-DRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGD 607 (711)
Q Consensus 529 wd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~-Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~D 607 (711)
.+++.... ..+..+.. ..|+++++.|+..+. ...|.+.++..+...+.+.+ ... ..++|+|++|+-...+
T Consensus 134 ~~~dGs~~-~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~---~~~-~~~~P~g~~iy~t~~~ 204 (302)
T 3s25_A 134 IRIDGEEK-KKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC---NCY-KPVVLDDTNVYYMDVN 204 (302)
T ss_dssp EETTSCCC-EEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS---CEE-EEEEEETTEEEEEEGG
T ss_pred EECCCCCe-EEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC---Ccc-ceeeecCCEEEEEEcC
Confidence 67765443 33433332 345677888776664 67899999877765555442 222 3466899988876544
Q ss_pred --CcEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeC--CCcEEEEeCC
Q psy14440 608 --GNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQ--DCSVKLWDFA 658 (711)
Q Consensus 608 --g~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~--Dg~V~iWdl~ 658 (711)
..|..-++..+. ...+.. ..+ ..|++++.+|+-++. .+.|..-++.
T Consensus 205 ~~~~I~~~~ldG~~-~~~Lt~--~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~D 254 (302)
T 3s25_A 205 RDNAIVHVNINNPN-PVVLTE--ANI--EHYNVYGSLIFYQRGGDNPALCVVKND 254 (302)
T ss_dssp GTTEEEEECSSSCC-CEECSC--SCE--EEEEEETTEEEEEECSSSCEEEEEETT
T ss_pred CCcEEEEEECCCCC-eEEEeC--CCc--ceEEECCCEEEEEECCCCcEEEEEECC
Confidence 357677765544 333331 233 336777887776533 2345444544
No 332
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.59 E-value=0.13 Score=53.07 Aligned_cols=183 Identities=11% Similarity=0.071 Sum_probs=90.6
Q ss_pred cCCCCEEEEEeC----CC-------eEEEEECCCCeEEEE--EecCCCCEEEEEEcCCCCEEEEEECC-------CeEEE
Q psy14440 469 SPDRSLLLSCSQ----DN-------TIRLWSLLLWRCLVV--YKGHGHPVWDIKFSPHGYYFASAGHD-------RMARL 528 (711)
Q Consensus 469 spdg~~L~s~s~----Dg-------~V~iwdl~t~~~~~~--~~~h~~~V~~v~~sp~g~~l~sgs~D-------g~i~l 528 (711)
..++..++.|+. ++ .+.+||..+.+-... +.........+.+ +++.++.|+.+ ..+.+
T Consensus 54 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~ 131 (318)
T 2woz_A 54 TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLC 131 (318)
T ss_dssp CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEE
T ss_pred EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEE
Confidence 346677777763 11 277788766543221 1111111112222 56677777754 34778
Q ss_pred EECCCCceeEE--eecCCCCeeEEEEcCCCCEEEEEEc------CCcEEEEECCCCcEEEEee--CCCCCeEEEEEecCC
Q psy14440 529 WATDSYHPLRL--FVGHYSDVDCVQFHPNSNYVATGSS------DRTIRLWDCVTGSHVRLLT--GHKAPVYALSFSVCG 598 (711)
Q Consensus 529 wd~~~~~~~~~--~~~h~~~V~~v~~sp~~~~latgs~------Dg~I~iwD~~~~~~v~~~~--~h~~~I~~la~spdg 598 (711)
||..+.+=... +......- +++. -++..++.|+. -..+.+||..+.+-...-. .......++. -++
T Consensus 132 yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~ 207 (318)
T 2woz_A 132 YDPVAAKWSEVKNLPIKVYGH-NVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI--HKG 207 (318)
T ss_dssp EETTTTEEEEECCCSSCEESC-EEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETT
T ss_pred EeCCCCCEeECCCCCCccccc-EEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEE--ECC
Confidence 88876532211 11101111 2222 35666666653 2358999998775332211 1111122222 357
Q ss_pred CEEEEEeCC-----CcEEEEECCCCeEEEE--eeCCCCCEEEEEEeCCCCEEEEEeCC--------------CcEEEEeC
Q psy14440 599 RFLASAGGD-----GNVHMWDLSNGHLLTL--LTGHTDVVRALCFSRDGNILASSGQD--------------CSVKLWDF 657 (711)
Q Consensus 599 ~~Lasgs~D-----g~I~iwDl~sg~~i~~--l~~h~~~V~sl~fspdg~~Lasgs~D--------------g~V~iWdl 657 (711)
++++.|+.+ ..+.+||+.+.+-... +....... +++ .-++++++.||.+ ..|.+||+
T Consensus 208 ~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~ 285 (318)
T 2woz_A 208 KIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSI-SLV-SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYED 285 (318)
T ss_dssp EEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSC-EEE-EETTEEEEECCBCCBC----CCBCCBCCCEEEEET
T ss_pred EEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccce-EEE-EECCEEEEECCeeccCCCCceeccceeeeEEEEeC
Confidence 777777643 3577899887654322 21111111 222 2357777877754 34667776
Q ss_pred CC
Q psy14440 658 AK 659 (711)
Q Consensus 658 ~~ 659 (711)
.+
T Consensus 286 ~~ 287 (318)
T 2woz_A 286 DK 287 (318)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 333
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.51 E-value=0.061 Score=54.95 Aligned_cols=179 Identities=15% Similarity=0.185 Sum_probs=91.6
Q ss_pred CEEEEEeCC----CeEEEEECCCCeEEEE--EecCCCCEEEEEEcCCCCEEEEEECC-----CeEEEEECCCCceeEE--
Q psy14440 473 SLLLSCSQD----NTIRLWSLLLWRCLVV--YKGHGHPVWDIKFSPHGYYFASAGHD-----RMARLWATDSYHPLRL-- 539 (711)
Q Consensus 473 ~~L~s~s~D----g~V~iwdl~t~~~~~~--~~~h~~~V~~v~~sp~g~~l~sgs~D-----g~i~lwd~~~~~~~~~-- 539 (711)
..++.|+.+ ..+.+||+.+.+-... +......-..+.+ ++..++.|+.+ ..+.+||..+.+=...
T Consensus 17 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~ 94 (302)
T 2xn4_A 17 LMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVAN 94 (302)
T ss_dssp EEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECC
T ss_pred EEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeCCC
Confidence 344445432 3578888876542221 1111111112222 56677777754 3578888876542211
Q ss_pred eecCCCCeeEEEEcCCCCEEEEEEcCC-----cEEEEECCCCcEEEEee--CCCCCeEEEEEecCCCEEEEEeCC-----
Q psy14440 540 FVGHYSDVDCVQFHPNSNYVATGSSDR-----TIRLWDCVTGSHVRLLT--GHKAPVYALSFSVCGRFLASAGGD----- 607 (711)
Q Consensus 540 ~~~h~~~V~~v~~sp~~~~latgs~Dg-----~I~iwD~~~~~~v~~~~--~h~~~I~~la~spdg~~Lasgs~D----- 607 (711)
+........++.+ ++..++.|+.++ .+.+||..+.+-...-. .......++. -++++++.|+.+
T Consensus 95 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~ 170 (302)
T 2xn4_A 95 MRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV--VGGLLYAVGGYDVASRQ 170 (302)
T ss_dssp CSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEETTTTE
T ss_pred CCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE--ECCEEEEEeCCCCCCCc
Confidence 1111111222222 566777776553 57889988765333211 1111222222 356777777643
Q ss_pred --CcEEEEECCCCeEEEE--eeCCCCCEEEEEEeCCCCEEEEEeCCC-----cEEEEeCCC
Q psy14440 608 --GNVHMWDLSNGHLLTL--LTGHTDVVRALCFSRDGNILASSGQDC-----SVKLWDFAK 659 (711)
Q Consensus 608 --g~I~iwDl~sg~~i~~--l~~h~~~V~sl~fspdg~~Lasgs~Dg-----~V~iWdl~~ 659 (711)
..+.+||+.+.+-... +....... +++. -++++++.||.++ .+.+||+.+
T Consensus 171 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~ 229 (302)
T 2xn4_A 171 CLSTVECYNATTNEWTYIAEMSTRRSGA-GVGV-LNNLLYAVGGHDGPLVRKSVEVYDPTT 229 (302)
T ss_dssp ECCCEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEECCBSSSSBCCCEEEEETTT
T ss_pred cccEEEEEeCCCCcEEECCCCccccccc-cEEE-ECCEEEEECCCCCCcccceEEEEeCCC
Confidence 3588999988764332 22111111 2222 2677888887653 688888865
No 334
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.46 E-value=1.1 Score=46.97 Aligned_cols=235 Identities=15% Similarity=0.083 Sum_probs=122.7
Q ss_pred EEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEE------ecCCCCEEEEEEcCC----CCEEEEEE--
Q psy14440 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY------KGHGHPVWDIKFSPH----GYYFASAG-- 521 (711)
Q Consensus 454 ~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~------~~h~~~V~~v~~sp~----g~~l~sgs-- 521 (711)
..+...-..-.+|+|.|||+++++--..|.|++++..+++..... .........|+++|+ +..+++-+
T Consensus 25 ~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~ 104 (347)
T 3das_A 25 RTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA 104 (347)
T ss_dssp EEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS
T ss_pred EEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC
Confidence 334444456789999999987766655899999987655543221 123456889999995 43333322
Q ss_pred CCCeEEEEECCCC--------ceeEEee----cCCCCeeEEEEcCCCCEEEEEEc-------------CCcEEEEECCCC
Q psy14440 522 HDRMARLWATDSY--------HPLRLFV----GHYSDVDCVQFHPNSNYVATGSS-------------DRTIRLWDCVTG 576 (711)
Q Consensus 522 ~Dg~i~lwd~~~~--------~~~~~~~----~h~~~V~~v~~sp~~~~latgs~-------------Dg~I~iwD~~~~ 576 (711)
.++.|.-|..... ....++. +....-..|.|.|+|.++++.+. .|.|.-++....
T Consensus 105 ~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ 184 (347)
T 3das_A 105 SDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGE 184 (347)
T ss_dssp SSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSS
T ss_pred CCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCC
Confidence 3455666655541 1111221 11123457999999987666432 245554554321
Q ss_pred --------cEEEEeeCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCCCe------------------EEEEeeCCCC
Q psy14440 577 --------SHVRLLTGHKAPVYALSFSVCGRFLASAG-GDGNVHMWDLSNGH------------------LLTLLTGHTD 629 (711)
Q Consensus 577 --------~~v~~~~~h~~~I~~la~spdg~~Lasgs-~Dg~I~iwDl~sg~------------------~i~~l~~h~~ 629 (711)
.....-.+|.. ...++|+++|.+.++-. .|+.=.|--+..|. .+..+..+..
T Consensus 185 ip~~nPf~~~~i~a~G~RN-p~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ 263 (347)
T 3das_A 185 PAPGNPFPGSPVYSYGHRN-VQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEA 263 (347)
T ss_dssp BCTTCSSTTCCEEEBCCSB-CCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTC
T ss_pred ccCCCCCCCCeEEeeCCCC-cceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCC
Confidence 11111225544 45789999887655432 23222222222221 1222222223
Q ss_pred CEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCCccCccccccccccccccccccceeeecccCCcceEEEEEccCCeeee
Q psy14440 630 VVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILLR 709 (711)
Q Consensus 630 ~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~t~~~pV~~v~Fs~~n~lla 709 (711)
....++|. +|.+++..-..+.|....+..... .. .... -+......+..|+..+||.++.
T Consensus 264 ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~-~~---------------~~e~---~l~~~~gR~~dv~~~pDG~lyv 323 (347)
T 3das_A 264 SPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAA-AA---------------DPQA---FLEGEYGRLRTVAPAGGDKLWL 323 (347)
T ss_dssp CEEEEEEE-TTEEEEEESTTCSEEEEEEETTEE-SS---------------CCEE---ESTTTSSCEEEEEEEETTEEEE
T ss_pred CCcceEEE-cCceeeccccCCEEEEEEecCCce-ec---------------ceEE---eecCCCCCccEEEECCCCcEEE
Confidence 56778887 455555544455555555432110 00 0011 1222345778888888876653
No 335
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.41 E-value=0.21 Score=61.19 Aligned_cols=192 Identities=11% Similarity=0.176 Sum_probs=120.0
Q ss_pred EcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCC-CceeEEeecC---
Q psy14440 468 FSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDS-YHPLRLFVGH--- 543 (711)
Q Consensus 468 fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~-~~~~~~~~~h--- 543 (711)
.+|..+.|+.-. ..++.|||+++...+..+.- ...|.-=.|-... .++..+ +..|+.|++.. ..+.+.|..|
T Consensus 73 MnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~-~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L 148 (1630)
T 1xi4_A 73 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSL 148 (1630)
T ss_pred cCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCCC-eeEEEc-CCeEEEeccCCCCccHHHHhcchhc
Confidence 355555554443 57899999998888777664 4456566676443 444443 46799999974 3566666655
Q ss_pred -CCCeeEEEEcCCCCEEEEEE-------cCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecC---CCEEEEEeC---CCc
Q psy14440 544 -YSDVDCVQFHPNSNYVATGS-------SDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVC---GRFLASAGG---DGN 609 (711)
Q Consensus 544 -~~~V~~v~~sp~~~~latgs-------~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spd---g~~Lasgs~---Dg~ 609 (711)
...|..-..+++.++++..+ ..|.+.+|.+..+. -+.+.||.+....+....+ ...++.+.. .|+
T Consensus 149 ~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~k 227 (1630)
T 1xi4_A 149 AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGK 227 (1630)
T ss_pred ccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhhheeccCCCCCCceEEEEEEecCCCce
Confidence 45677778888888876543 35788899876553 3556677665544443211 122222221 268
Q ss_pred EEEEECCCC---e------EEEEee---CCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCCCcc
Q psy14440 610 VHMWDLSNG---H------LLTLLT---GHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEV 664 (711)
Q Consensus 610 I~iwDl~sg---~------~i~~l~---~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~~~~~ 664 (711)
++|.++... . .+..+- ...+-..++..|+.-.++...+.-|.|++||+.+++...
T Consensus 228 Lhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~ 294 (1630)
T 1xi4_A 228 LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIY 294 (1630)
T ss_pred EEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhh
Confidence 999988543 1 111111 112334567777777788888899999999999876543
No 336
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.16 E-value=0.14 Score=50.10 Aligned_cols=176 Identities=15% Similarity=0.080 Sum_probs=99.9
Q ss_pred CCEEEEEeCCCeEEEEECCCCeE-----EEEEecC--CCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCcee------E
Q psy14440 472 RSLLLSCSQDNTIRLWSLLLWRC-----LVVYKGH--GHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPL------R 538 (711)
Q Consensus 472 g~~L~s~s~Dg~V~iwdl~t~~~-----~~~~~~h--~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~------~ 538 (711)
..+|++...| +|++=....... ..+..++ =..+.+++|+|+|.+.++ .+|.++-.+..+.... .
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t 80 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAK 80 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCE
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCccccccccc
Confidence 3456666666 666554433221 0111122 236779999999987776 6777766665442211 1
Q ss_pred Eee-cCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcE-------EEEeeCCCCCeEEEEEecCCCEEEEEeCCCcE
Q psy14440 539 LFV-GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH-------VRLLTGHKAPVYALSFSVCGRFLASAGGDGNV 610 (711)
Q Consensus 539 ~~~-~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~-------v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I 610 (711)
.+- +--....++.|+++|.+.++ .||.|+-++--+... ..+-.+--..+..|.+.|+|.+.++. ||.+
T Consensus 81 ~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~l 156 (236)
T 1tl2_A 81 KIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQF 156 (236)
T ss_dssp EEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred EecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcE
Confidence 110 01111478999999988887 579998887533211 11111122468999999999887776 7775
Q ss_pred EEEECCCCe------EEEEee-CCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCC
Q psy14440 611 HMWDLSNGH------LLTLLT-GHTDVVRALCFSRDGNILASSGQDCSVKLWDFA 658 (711)
Q Consensus 611 ~iwDl~sg~------~i~~l~-~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~ 658 (711)
+-+...++. ....+. ........+.|+++|.+.++. +| ++|-..
T Consensus 157 yr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g--~~Y~~~ 207 (236)
T 1tl2_A 157 YKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GG--KFYEDY 207 (236)
T ss_dssp EEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TT--EEEEES
T ss_pred EecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe--CC--eEEecC
Confidence 443322111 011111 222345567799999877766 66 555543
No 337
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.92 E-value=0.76 Score=50.17 Aligned_cols=156 Identities=17% Similarity=0.230 Sum_probs=89.1
Q ss_pred CCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeE--Eeec------CCCCeeEEEEcCC---CCEEEEEEc------
Q psy14440 502 GHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLR--LFVG------HYSDVDCVQFHPN---SNYVATGSS------ 564 (711)
Q Consensus 502 ~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~--~~~~------h~~~V~~v~~sp~---~~~latgs~------ 564 (711)
-...+.|+|.|+|+++++-...+.|++++..++.... .+.. .......|+|+|+ +.+|.++..
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 4467899999999877765444578888765554322 2211 2345679999995 455544432
Q ss_pred -------CCcEEEEECCCC--c---EEEE---ee-CCCCCeEEEEEecCCCEEEEEeCC---------------------
Q psy14440 565 -------DRTIRLWDCVTG--S---HVRL---LT-GHKAPVYALSFSVCGRFLASAGGD--------------------- 607 (711)
Q Consensus 565 -------Dg~I~iwD~~~~--~---~v~~---~~-~h~~~I~~la~spdg~~Lasgs~D--------------------- 607 (711)
...|.-|+...+ . .... +. +.......|+|.+||.+.++.+..
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~ 185 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQ 185 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCTTTTSGGGTTSCCCTTCCCCHH
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCCCCCCccccccccccccccccc
Confidence 134555654322 1 1111 21 122347899999999877765532
Q ss_pred -----------CcEEEEECCCCe-----------EEEEe-eCCCCCEEEEEEeCCCCEEEEE-eCCCcEEEEeCCC
Q psy14440 608 -----------GNVHMWDLSNGH-----------LLTLL-TGHTDVVRALCFSRDGNILASS-GQDCSVKLWDFAK 659 (711)
Q Consensus 608 -----------g~I~iwDl~sg~-----------~i~~l-~~h~~~V~sl~fspdg~~Lasg-s~Dg~V~iWdl~~ 659 (711)
|.|.-++.. |+ ....+ .+|. ....++|+++|.++++- +.++.-.|.-+..
T Consensus 186 ~~~aq~~~~~~G~IlRi~~d-G~ip~~Npf~~~~~~ei~a~G~R-Np~gla~dp~G~L~~~d~g~~~~dein~i~~ 259 (454)
T 1cru_A 186 ELNGKDYHTYMGKVLRLNLD-GSIPKDNPSFNGVVSHIYTLGHR-NPQGLAFTPNGKLLQSEQGPNSDDEINLIVK 259 (454)
T ss_dssp HHHTTCCTTCSSEEEEECTT-SCCCTTCCEETTEECSEEEBCCS-EEEEEEECTTSCEEEEEECSSSCEEEEECCT
T ss_pred cccccCCCCCCeeEEEEeCC-CCCCCCCCCCCCCcceEEEECCC-CcceEEECCCCCEEEEecCCCCCeEEEEecC
Confidence 334444432 22 11122 2443 46799999988866553 4455555655544
No 338
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.91 E-value=0.094 Score=53.83 Aligned_cols=182 Identities=11% Similarity=0.061 Sum_probs=94.1
Q ss_pred CCCEEEEEeCC----CeEEEEECCCCeEEEE--EecCCCCEEEEEEcCCCCEEEEEEC----C-----CeEEEEECCCCc
Q psy14440 471 DRSLLLSCSQD----NTIRLWSLLLWRCLVV--YKGHGHPVWDIKFSPHGYYFASAGH----D-----RMARLWATDSYH 535 (711)
Q Consensus 471 dg~~L~s~s~D----g~V~iwdl~t~~~~~~--~~~h~~~V~~v~~sp~g~~l~sgs~----D-----g~i~lwd~~~~~ 535 (711)
++..++.|+.+ ..+.+||..+.+-... +.........+.+ ++..++.|+. + ..+.+||..+.+
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEE--CCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 45566666632 3588999876543222 1111111112222 5667777765 2 457888887653
Q ss_pred eeEE--eecCCCCeeEEEEcCCCCEEEEEEcC-----CcEEEEECCCCcEEEEe--eCCCCCeEEEEEecCCCEEEEEeC
Q psy14440 536 PLRL--FVGHYSDVDCVQFHPNSNYVATGSSD-----RTIRLWDCVTGSHVRLL--TGHKAPVYALSFSVCGRFLASAGG 606 (711)
Q Consensus 536 ~~~~--~~~h~~~V~~v~~sp~~~~latgs~D-----g~I~iwD~~~~~~v~~~--~~h~~~I~~la~spdg~~Lasgs~ 606 (711)
=... +........++.+ ++..++.|+.+ ..+.+||..+.+-...- ........++.+ ++++++.|+.
T Consensus 102 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~ 177 (308)
T 1zgk_A 102 WSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGF 177 (308)
T ss_dssp EEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred EeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCC
Confidence 2111 1111112222222 56666666543 46889998876533221 111122222222 6777777775
Q ss_pred C-----CcEEEEECCCCeEEEE--eeCCCCCEEEEEEeCCCCEEEEEeCC-----CcEEEEeCCCC
Q psy14440 607 D-----GNVHMWDLSNGHLLTL--LTGHTDVVRALCFSRDGNILASSGQD-----CSVKLWDFAKL 660 (711)
Q Consensus 607 D-----g~I~iwDl~sg~~i~~--l~~h~~~V~sl~fspdg~~Lasgs~D-----g~V~iWdl~~~ 660 (711)
+ ..+.+||+.+.+-... +.........+.+ ++++++.||.+ ..+.+||+.+.
T Consensus 178 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 178 DGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp CSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCC
Confidence 4 4689999987754322 1111111122222 67788888765 46888988753
No 339
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.80 E-value=0.43 Score=58.47 Aligned_cols=246 Identities=11% Similarity=0.101 Sum_probs=141.1
Q ss_pred CCeEEEEeCCCCceee--------eccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEe
Q psy14440 408 ESYIKLWSLVPQKLKA--------MKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCS 479 (711)
Q Consensus 408 dg~I~vWdl~~~~~~~--------~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s 479 (711)
...|.|-|+....-.. ...++....++... ...++++|..+...++.+.-. ..|.--.|-.+.. |+-.+
T Consensus 47 ~~~vvIidl~~~~~~~rrpi~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~-e~VvfWkWis~~~-l~lVT 123 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNT-VALVT 123 (1630)
T ss_pred CceEEEEECCCCCCcccccccchhhccCCCcceEEEec-CCeEEEeehHHhhhhcccccC-CCceEEEecCCCe-eEEEc
Confidence 3468888876533111 01122233444443 778999998888777666543 4577778875554 33333
Q ss_pred CCCeEEEEECCC-CeEEEEEecC----CCCEEEEEEcCCCCEEEEEE-------CCCeEEEEECCCCceeEEeecCCCCe
Q psy14440 480 QDNTIRLWSLLL-WRCLVVYKGH----GHPVWDIKFSPHGYYFASAG-------HDRMARLWATDSYHPLRLFVGHYSDV 547 (711)
Q Consensus 480 ~Dg~V~iwdl~t-~~~~~~~~~h----~~~V~~v~~sp~g~~l~sgs-------~Dg~i~lwd~~~~~~~~~~~~h~~~V 547 (711)
+..|.-|++.. ......+..| +..|..-..+++.++++..| -.|.+.+|+.+.+ ..+.+.||.+..
T Consensus 124 -~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F 201 (1630)
T 1xi4_A 124 -DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASF 201 (1630)
T ss_pred -CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhh
Confidence 34599999963 2333334333 45676777788888777554 3578899998764 344566776655
Q ss_pred eEEEEcCC---CCEEEEEEc---CCcEEEEECCCC---cE------EEEeeCC---CCCeEEEEEecCCCEEEEEeCCCc
Q psy14440 548 DCVQFHPN---SNYVATGSS---DRTIRLWDCVTG---SH------VRLLTGH---KAPVYALSFSVCGRFLASAGGDGN 609 (711)
Q Consensus 548 ~~v~~sp~---~~~latgs~---Dg~I~iwD~~~~---~~------v~~~~~h---~~~I~~la~spdg~~Lasgs~Dg~ 609 (711)
..+....+ ...++.+.. .+.++|.++... .. +..+... ..--.++..|+....+..-+.-|.
T Consensus 202 ~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~ 281 (1630)
T 1xi4_A 202 AQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY 281 (1630)
T ss_pred heeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCce
Confidence 44444321 122222221 368888887432 11 1111111 222345677777778888888999
Q ss_pred EEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCC
Q psy14440 610 VHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFA 658 (711)
Q Consensus 610 I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~ 658 (711)
|.+||+.+|.++..-+-....|...+-+....=+++....|.|.--.+.
T Consensus 282 ~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~ 330 (1630)
T 1xi4_A 282 IHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVE 330 (1630)
T ss_pred EEEEecccchhhhhccccCCceEEeccCCCCCceEEEcCCceEEEEEEc
Confidence 9999999999876655444444444433332223333355555444443
No 340
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.74 E-value=0.39 Score=49.22 Aligned_cols=177 Identities=10% Similarity=0.022 Sum_probs=91.0
Q ss_pred EEEEeCCCeEEEEECCCCeEEE-EEecCCCCEEEEEEcCCCCEEEEEEC----C-------CeEEEEECCCCceeEEeec
Q psy14440 475 LLSCSQDNTIRLWSLLLWRCLV-VYKGHGHPVWDIKFSPHGYYFASAGH----D-------RMARLWATDSYHPLRLFVG 542 (711)
Q Consensus 475 L~s~s~Dg~V~iwdl~t~~~~~-~~~~h~~~V~~v~~sp~g~~l~sgs~----D-------g~i~lwd~~~~~~~~~~~~ 542 (711)
++.|+ ..+.+||..+.+-.. .+.............-++..++.|+. + ..+.+||..+.+= ..+..
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W-~~~~~ 84 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW-LGMPP 84 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEE-EECCC
T ss_pred EEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeE-EECCC
Confidence 44454 568999998766332 11111122222233346778888873 1 1267788876532 11111
Q ss_pred ---CCCCeeEEEEcCCCCEEEEEEcC--------CcEEEEECCCCcEEEEee--CCCCCeEEEEEecCCCEEEEEeC-C-
Q psy14440 543 ---HYSDVDCVQFHPNSNYVATGSSD--------RTIRLWDCVTGSHVRLLT--GHKAPVYALSFSVCGRFLASAGG-D- 607 (711)
Q Consensus 543 ---h~~~V~~v~~sp~~~~latgs~D--------g~I~iwD~~~~~~v~~~~--~h~~~I~~la~spdg~~Lasgs~-D- 607 (711)
..... +++.. ++..++.|+.+ ..+.+||..+++-...-. .......++ .-+++.++.|+. +
T Consensus 85 ~p~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~ 160 (315)
T 4asc_A 85 LPSPRCLF-GLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVL--SHMDLVYVIGGKGSD 160 (315)
T ss_dssp BSSCEESC-EEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEE--EETTEEEEECCBCTT
T ss_pred CCcchhce-eEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEE--EECCEEEEEeCCCCC
Confidence 11111 22222 55666666632 458999998765322111 111112222 246777777775 2
Q ss_pred ----CcEEEEECCCCeEEEE--eeCCCCCEEEEEEeCCCCEEEEEeCCC-----cEEEEeCCCC
Q psy14440 608 ----GNVHMWDLSNGHLLTL--LTGHTDVVRALCFSRDGNILASSGQDC-----SVKLWDFAKL 660 (711)
Q Consensus 608 ----g~I~iwDl~sg~~i~~--l~~h~~~V~sl~fspdg~~Lasgs~Dg-----~V~iWdl~~~ 660 (711)
..+.+||+.+.+-... +.........+ .-++++++.||.++ .+.+||+.+.
T Consensus 161 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 161 RKCLNKMCVYDPKKFEWKELAPMQTARSLFGAT--VHDGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSSCCBSCEEE--EETTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred CcccceEEEEeCCCCeEEECCCCCCchhceEEE--EECCEEEEEeccCCCCccceEEEEECCCC
Confidence 4689999988754322 11111111222 22678888888665 4788887653
No 341
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.58 E-value=0.013 Score=61.62 Aligned_cols=146 Identities=10% Similarity=0.012 Sum_probs=87.4
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEEecC-CCCEEEEEEc--CCCCEEEEE--ECCCeEEEEECCCCceeEEeec----C
Q psy14440 473 SLLLSCSQDNTIRLWSLLLWRCLVVYKGH-GHPVWDIKFS--PHGYYFASA--GHDRMARLWATDSYHPLRLFVG----H 543 (711)
Q Consensus 473 ~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h-~~~V~~v~~s--p~g~~l~sg--s~Dg~i~lwd~~~~~~~~~~~~----h 543 (711)
..++.++.||.|..+|..+|+.+..++.. ..++....-. +.+..++.+ +.||.+..++..++.....+.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 47889999999999999999999988754 1222221100 112233333 5899999999887744333221 1
Q ss_pred CCCeeE---EEE-c----CCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCC--CC-----eEEEEEe-----cCCCEEEE
Q psy14440 544 YSDVDC---VQF-H----PNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHK--AP-----VYALSFS-----VCGRFLAS 603 (711)
Q Consensus 544 ~~~V~~---v~~-s----p~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~--~~-----I~~la~s-----pdg~~Las 603 (711)
.+++.. ... . ..+..+++|+.+|++...|+++|+.+..+.... +. ..|.... -.+..|+.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 122211 000 0 145688999999999999999999998886321 11 1122111 12456777
Q ss_pred EeCCCcEEEEECCCCe
Q psy14440 604 AGGDGNVHMWDLSNGH 619 (711)
Q Consensus 604 gs~Dg~I~iwDl~sg~ 619 (711)
|..+..|.+.+ ++|+
T Consensus 171 g~~~y~v~~~~-~sG~ 185 (339)
T 2be1_A 171 GKTIFELGIHS-YDGA 185 (339)
T ss_dssp EEEEEECEECC-TTSC
T ss_pred ecceEEEEEEC-CCCC
Confidence 77777777766 4453
No 342
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.49 E-value=0.68 Score=47.58 Aligned_cols=171 Identities=6% Similarity=-0.009 Sum_probs=97.8
Q ss_pred CCCCEEEEEe--CCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECC--------------CeEEEEECCC
Q psy14440 470 PDRSLLLSCS--QDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHD--------------RMARLWATDS 533 (711)
Q Consensus 470 pdg~~L~s~s--~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~D--------------g~i~lwd~~~ 533 (711)
.++.+|+... .++.|...+.+.... ..+.. . .+--++++|.+|+.+... ..|+..+++.
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~~-~~l~~--~--~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg 97 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSNI-HKLSN--D--TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG 97 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCSC-EEEEE--E--EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTS
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCCC-EEccC--C--ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCC
Confidence 3555555443 245566666543332 22221 1 123456778877776542 4677788887
Q ss_pred CceeEEeecCCCCeeEEEEcCCCCEEEEEE----cCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeC-CC
Q psy14440 534 YHPLRLFVGHYSDVDCVQFHPNSNYVATGS----SDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGG-DG 608 (711)
Q Consensus 534 ~~~~~~~~~h~~~V~~v~~sp~~~~latgs----~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~-Dg 608 (711)
......... .+..|++++++|+... .+..|...++.... ...+..+.. .+|+++|+.|+-.+. ..
T Consensus 98 ~~~~~l~~~-----~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~ 167 (302)
T 3s25_A 98 HGSTVLDPD-----PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNG 167 (302)
T ss_dssp CCCEEEECS-----CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTC
T ss_pred CcceEeecC-----CccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCc
Confidence 654333221 2346777888988776 34456667776444 344444433 456788888886654 57
Q ss_pred cEEEEECCCCeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCC--cEEEEeCCC
Q psy14440 609 NVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDC--SVKLWDFAK 659 (711)
Q Consensus 609 ~I~iwDl~sg~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg--~V~iWdl~~ 659 (711)
.|.+.++..+.....+.+ ... ..++|++.+|+-...++ .|..-++..
T Consensus 168 ~Iy~~~l~g~~~~~l~~~---~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG 216 (302)
T 3s25_A 168 QLYRYDTASQSEALFYDC---NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINN 216 (302)
T ss_dssp CEEEEETTTTEEEEEECS---CEE-EEEEEETTEEEEEEGGGTTEEEEECSSS
T ss_pred eEEEEECCCCCEEEEeCC---Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCC
Confidence 899999877665443332 222 34668888877665443 444444443
No 343
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.42 E-value=0.21 Score=52.27 Aligned_cols=132 Identities=8% Similarity=-0.049 Sum_probs=61.9
Q ss_pred CeEEEEECCCCc--eeEEeecCCCCeeEEEEcCCCCEEEEEEc------CCcEEEEEC--CCCcEEEEeeC---CCCCeE
Q psy14440 524 RMARLWATDSYH--PLRLFVGHYSDVDCVQFHPNSNYVATGSS------DRTIRLWDC--VTGSHVRLLTG---HKAPVY 590 (711)
Q Consensus 524 g~i~lwd~~~~~--~~~~~~~h~~~V~~v~~sp~~~~latgs~------Dg~I~iwD~--~~~~~v~~~~~---h~~~I~ 590 (711)
..+.+||..+.+ .+..+......-.+++.. +++.++.|+. ...+.+||+ .+.+ -..+.. ......
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~-W~~~~~~~~~~~~~~ 245 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLK-WNKLAPVSSPDGVAG 245 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CE-EEECCCSSTTTCCBS
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCc-EEecCCCCCCccccc
Confidence 578889987653 222221111111233333 5556666653 345777887 3332 222211 111111
Q ss_pred EEEEecCCCEEEEEeCC----------------------CcEEEEECCCCe--EEEEeeCCCCCEEEEEEeCCCCEEEEE
Q psy14440 591 ALSFSVCGRFLASAGGD----------------------GNVHMWDLSNGH--LLTLLTGHTDVVRALCFSRDGNILASS 646 (711)
Q Consensus 591 ~la~spdg~~Lasgs~D----------------------g~I~iwDl~sg~--~i~~l~~h~~~V~sl~fspdg~~Lasg 646 (711)
..+...++++++.|+.+ ..+.+||+.+.+ .+..+......-.. ..-++++++.|
T Consensus 246 ~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~--~~~~~~i~v~G 323 (357)
T 2uvk_A 246 GFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVS--LPWNNSLLIIG 323 (357)
T ss_dssp CEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEE--EEETTEEEEEE
T ss_pred ceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCccccee--EEeCCEEEEEe
Confidence 12233467777777632 257899987654 44444332222222 23467888888
Q ss_pred eCCC------cEEEEeCCC
Q psy14440 647 GQDC------SVKLWDFAK 659 (711)
Q Consensus 647 s~Dg------~V~iWdl~~ 659 (711)
|.++ .|.+++++.
T Consensus 324 G~~~~~~~~~~v~~l~~~~ 342 (357)
T 2uvk_A 324 GETAGGKAVTDSVLITVKD 342 (357)
T ss_dssp EECGGGCEEEEEEEEEC-C
T ss_pred eeCCCCCEeeeEEEEEEcC
Confidence 8653 244446654
No 344
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.22 E-value=0.23 Score=52.40 Aligned_cols=142 Identities=12% Similarity=0.135 Sum_probs=78.9
Q ss_pred CCEEEEEEcCCCCEEEEEECCCeEEEEECCCCc--eeE----EeecCCCCeeEEEEcCC---CCEEEEEE-c-------C
Q psy14440 503 HPVWDIKFSPHGYYFASAGHDRMARLWATDSYH--PLR----LFVGHYSDVDCVQFHPN---SNYVATGS-S-------D 565 (711)
Q Consensus 503 ~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~--~~~----~~~~h~~~V~~v~~sp~---~~~latgs-~-------D 565 (711)
...+.|+|.|+|+.++++...|.|++++.+... .+. .+.........|+|+|+ +.+|.++. . .
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 356899999999834455678999999854321 111 11122345789999995 44444443 2 2
Q ss_pred CcEEEEECCCC--c--EEE-EeeC------CCCCeEEEEEecCCCEEEEEeC-------------CCcEEEEECCCC---
Q psy14440 566 RTIRLWDCVTG--S--HVR-LLTG------HKAPVYALSFSVCGRFLASAGG-------------DGNVHMWDLSNG--- 618 (711)
Q Consensus 566 g~I~iwD~~~~--~--~v~-~~~~------h~~~I~~la~spdg~~Lasgs~-------------Dg~I~iwDl~sg--- 618 (711)
..|..|++..+ . ... .+.+ .......|+|.|||.+.++.+. .|+|.-+|....
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~ 177 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD 177 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC
Confidence 35666666533 1 112 1211 1112357999999966555443 246777775421
Q ss_pred ---------eEEEEe-eCCCCCEEEEEEeC-CCCEEEE
Q psy14440 619 ---------HLLTLL-TGHTDVVRALCFSR-DGNILAS 645 (711)
Q Consensus 619 ---------~~i~~l-~~h~~~V~sl~fsp-dg~~Las 645 (711)
.....+ .+|. ....++|++ +|+++++
T Consensus 178 ~npf~~~~~~~~~i~a~G~r-np~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 178 DNPFIKESGVRAEIWSYGIR-NPQGMAMNPWSNALWLN 214 (353)
T ss_dssp TCTTTTSTTSCTTEEEECCS-EEEEEEEETTTTEEEEE
T ss_pred CCCCcCCCCCCccEEEEcCc-CccceEEECCCCCEEEE
Confidence 011111 2343 368999999 5655544
No 345
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.18 E-value=0.88 Score=46.57 Aligned_cols=172 Identities=11% Similarity=0.114 Sum_probs=86.1
Q ss_pred eEEEEECCCCeEEE-EEecCCCCEEEEEEcCCCCEEEEEEC----CC-------eEEEEECCCCceeEE--eecCCCCee
Q psy14440 483 TIRLWSLLLWRCLV-VYKGHGHPVWDIKFSPHGYYFASAGH----DR-------MARLWATDSYHPLRL--FVGHYSDVD 548 (711)
Q Consensus 483 ~V~iwdl~t~~~~~-~~~~h~~~V~~v~~sp~g~~l~sgs~----Dg-------~i~lwd~~~~~~~~~--~~~h~~~V~ 548 (711)
.+.+||..+.+-.. ................++..++.|+. ++ .+.+||..+.+=... +.......
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~- 103 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLF- 103 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSC-
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcccccc-
Confidence 37888887665433 12111111222233446778888873 12 167788776532111 11111112
Q ss_pred EEEEcCCCCEEEEEEcC-------CcEEEEECCCCcEEEEee--CCCCCeEEEEEecCCCEEEEEeC------CCcEEEE
Q psy14440 549 CVQFHPNSNYVATGSSD-------RTIRLWDCVTGSHVRLLT--GHKAPVYALSFSVCGRFLASAGG------DGNVHMW 613 (711)
Q Consensus 549 ~v~~sp~~~~latgs~D-------g~I~iwD~~~~~~v~~~~--~h~~~I~~la~spdg~~Lasgs~------Dg~I~iw 613 (711)
+++.. ++..++.|+.+ ..+.+||..+.+-...-. .....-.++ .-++++++.|+. -..+.+|
T Consensus 104 ~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~~y 180 (318)
T 2woz_A 104 GLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVI--SHNGMIYCLGGKTDDKKCTNRVFIY 180 (318)
T ss_dssp EEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEE--EETTEEEEECCEESSSCBCCCEEEE
T ss_pred ceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEE--EECCEEEEEcCCCCCCCccceEEEE
Confidence 22222 56666677653 247889988765332211 111111122 246777777764 2359999
Q ss_pred ECCCCeEEEE--eeCCCCCEEEEEEeCCCCEEEEEeCCC-----cEEEEeCCCC
Q psy14440 614 DLSNGHLLTL--LTGHTDVVRALCFSRDGNILASSGQDC-----SVKLWDFAKL 660 (711)
Q Consensus 614 Dl~sg~~i~~--l~~h~~~V~sl~fspdg~~Lasgs~Dg-----~V~iWdl~~~ 660 (711)
|+.+.+-... +....... +++. -++++++.||.++ .+.+||+.+.
T Consensus 181 d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 181 NPKKGDWKDLAPMKTPRSMF-GVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp ETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEEEEEETTEEEEEEEEEETTTC
T ss_pred cCCCCEEEECCCCCCCcccc-eEEE-ECCEEEEEcCcCCCCccceEEEEECCCC
Confidence 9988764332 21111111 2222 2677888887543 4678887653
No 346
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.17 E-value=3.9 Score=45.29 Aligned_cols=100 Identities=14% Similarity=0.076 Sum_probs=66.9
Q ss_pred CeeEEEEcCCCCEEEEEE-cCCcEEEEECCCC------cE-------EEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEE
Q psy14440 546 DVDCVQFHPNSNYVATGS-SDRTIRLWDCVTG------SH-------VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVH 611 (711)
Q Consensus 546 ~V~~v~~sp~~~~latgs-~Dg~I~iwD~~~~------~~-------v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~ 611 (711)
....+.++|||+|+++++ -+.+|.++|+..- +. +.... -.-.....+|.++|.-..|---|..|.
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEE
Confidence 346788999999988876 4789999998741 11 22222 234466789999996555666899999
Q ss_pred EEECCCC----------eEEEEeeCCCCCEEEEEE------eCCCCEEEEEe
Q psy14440 612 MWDLSNG----------HLLTLLTGHTDVVRALCF------SRDGNILASSG 647 (711)
Q Consensus 612 iwDl~sg----------~~i~~l~~h~~~V~sl~f------spdg~~Lasgs 647 (711)
-|++... ..+..+.-|-..- .+.- .+||++|++..
T Consensus 403 kWni~~a~~~~~g~~~~~v~~k~dv~YqpG-H~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 403 KWNMEEAVRAYKGEKVNYIKQKLDVHYQPG-HLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEHHHHHHHHTTCCCCCEEEEEECSSCEE-EEEETTTTSTTCCSCEEEEEE
T ss_pred EEeccHHHHHhcCccCCeeeeccccccCCc-ccccCCCccCCCCccEEEEec
Confidence 9998653 4666666554322 2222 45777777764
No 347
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.99 E-value=0.46 Score=49.56 Aligned_cols=139 Identities=6% Similarity=-0.054 Sum_probs=65.0
Q ss_pred CeEEEEECCCCe--EEEEEecCCCCEEEEEEcCCCCEEEEEEC------CCeEEEEEC--CCCceeEEeec---CCCCee
Q psy14440 482 NTIRLWSLLLWR--CLVVYKGHGHPVWDIKFSPHGYYFASAGH------DRMARLWAT--DSYHPLRLFVG---HYSDVD 548 (711)
Q Consensus 482 g~V~iwdl~t~~--~~~~~~~h~~~V~~v~~sp~g~~l~sgs~------Dg~i~lwd~--~~~~~~~~~~~---h~~~V~ 548 (711)
..+.+||..+.+ .+..+......-.+++.. ++++++.|+. ...+.+||+ .+.. -..+.. ......
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~-W~~~~~~~~~~~~~~ 245 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLK-WNKLAPVSSPDGVAG 245 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CE-EEECCCSSTTTCCBS
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCc-EEecCCCCCCccccc
Confidence 478999987643 333322111110122222 4566666653 345667776 3221 111111 111111
Q ss_pred EEEEcCCCCEEEEEEcC----------------------CcEEEEECCCCcE--EEEeeCCCCCeEEEEEecCCCEEEEE
Q psy14440 549 CVQFHPNSNYVATGSSD----------------------RTIRLWDCVTGSH--VRLLTGHKAPVYALSFSVCGRFLASA 604 (711)
Q Consensus 549 ~v~~sp~~~~latgs~D----------------------g~I~iwD~~~~~~--v~~~~~h~~~I~~la~spdg~~Lasg 604 (711)
+.+...++..++.|+.+ ..+.+||+.+.+- +..+......-.+ +.-++++++.|
T Consensus 246 ~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~--~~~~~~i~v~G 323 (357)
T 2uvk_A 246 GFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVS--LPWNNSLLIIG 323 (357)
T ss_dssp CEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEE--EEETTEEEEEE
T ss_pred ceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCccccee--EEeCCEEEEEe
Confidence 11222256666666632 2577899876542 3233222222222 33468888888
Q ss_pred eCCC------cEEEEECCCCeEEEEe
Q psy14440 605 GGDG------NVHMWDLSNGHLLTLL 624 (711)
Q Consensus 605 s~Dg------~I~iwDl~sg~~i~~l 624 (711)
|.++ .|.++++++++.+...
T Consensus 324 G~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 324 GETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp EECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred eeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 8653 3666688877765543
No 348
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=94.79 E-value=5.8 Score=43.21 Aligned_cols=252 Identities=16% Similarity=0.170 Sum_probs=121.6
Q ss_pred CCceEEEEECCCCC-EEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEE
Q psy14440 387 RQQVTCAEISEDVS-ILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRK 465 (711)
Q Consensus 387 ~~~V~~l~fs~dg~-~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~ 465 (711)
-..-+.|+|.|||+ .|+++...|.|++++..+...... . .+...+... + ...+..+....
T Consensus 13 L~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~-~-~~~~~~~~~-------------g----~~~~~e~Gllg 73 (463)
T 2wg3_C 13 LRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEP-Y-LDIHKLVQS-------------G----IKGGDERGLLS 73 (463)
T ss_dssp ESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSC-S-EECTTTBCC-------------C----CSSSCCCSEEE
T ss_pred CCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeee-e-cCCcceecc-------------C----ccccCCCccee
Confidence 35678999999996 455556789999997543211000 0 000000000 0 00012345677
Q ss_pred EEEcCC----CCEEEEEeC--C----------CeEEEEECCC----------CeEEEEEe--cCCCCEEEEEEcCCCCEE
Q psy14440 466 LSFSPD----RSLLLSCSQ--D----------NTIRLWSLLL----------WRCLVVYK--GHGHPVWDIKFSPHGYYF 517 (711)
Q Consensus 466 l~fspd----g~~L~s~s~--D----------g~V~iwdl~t----------~~~~~~~~--~h~~~V~~v~~sp~g~~l 517 (711)
|+|+|+ +.+.++-+. + ..|.-|.+.. .+.+..+. ...+....|+|.|+|.++
T Consensus 74 ia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LY 153 (463)
T 2wg3_C 74 LAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLY 153 (463)
T ss_dssp EEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEE
T ss_pred eEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEE
Confidence 888875 333333221 1 1343454431 23333332 223456789999999877
Q ss_pred EEEECCC-----------------eEEEEECCCCc-------------------eeEEee-cCCCCeeEEEEcCC-----
Q psy14440 518 ASAGHDR-----------------MARLWATDSYH-------------------PLRLFV-GHYSDVDCVQFHPN----- 555 (711)
Q Consensus 518 ~sgs~Dg-----------------~i~lwd~~~~~-------------------~~~~~~-~h~~~V~~v~~sp~----- 555 (711)
++.+..+ .|.-.+.+... ...++. ||.. ...++|++.
T Consensus 154 v~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RN-p~gla~dp~tg~~~ 232 (463)
T 2wg3_C 154 IILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHD-PGRCAVDRHPTDIN 232 (463)
T ss_dssp EEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSS-CCBEEEESSCSSTT
T ss_pred EEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCC-cceEEECCCCCCcc
Confidence 7766433 23333444310 011222 3433 457899986
Q ss_pred CC-EEEEEEcCC----cEEEEECCCCc------EEEEeeCCC-CCeEEEEEecC-------CCEEEEEeCCCcEEEEECC
Q psy14440 556 SN-YVATGSSDR----TIRLWDCVTGS------HVRLLTGHK-APVYALSFSVC-------GRFLASAGGDGNVHMWDLS 616 (711)
Q Consensus 556 ~~-~latgs~Dg----~I~iwD~~~~~------~v~~~~~h~-~~I~~la~spd-------g~~Lasgs~Dg~I~iwDl~ 616 (711)
|+ +++.+...| .-.|..+..|. .+..+..|. ..+..+.|-.. |.+|+ +...+.|....+.
T Consensus 233 G~l~~~~~D~~G~~~~~~ei~~i~~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~-~~~~g~i~~~~~~ 311 (463)
T 2wg3_C 233 INLTILCSDSNGKNRSSARILQIIKGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVF-GDRNGNFLTLQQS 311 (463)
T ss_dssp CSEEEEEECC------CEEEEEEC----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEEE-EETTSCEEEEEC-
T ss_pred cceEEEecccCCCCCCCCeEeeeccCCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEEE-ecCCCcEEEEEeC
Confidence 34 344332112 22344443332 233333221 46777777432 34444 4445777666664
Q ss_pred CCe---EEEEe-e--------CCCCCEEEEEEeCCCCEEEEEeCC-----CcEEEEeCCC
Q psy14440 617 NGH---LLTLL-T--------GHTDVVRALCFSRDGNILASSGQD-----CSVKLWDFAK 659 (711)
Q Consensus 617 sg~---~i~~l-~--------~h~~~V~sl~fspdg~~Lasgs~D-----g~V~iWdl~~ 659 (711)
.+. ....+ . .....+.++.+.+||.++++.... ..=+||.+..
T Consensus 312 ~~~~~~~~~~~~~g~~~~~~~~~~~r~~~v~~~pdG~Lyv~~~~~~~~~~~~G~I~Ri~~ 371 (463)
T 2wg3_C 312 PVTKQWQEKPLCLGTSGSCRGYFSGHILGFGEDELGEVYILSSSKSMTQTHNGKLYKIVD 371 (463)
T ss_dssp ----CCEEEEECEEETTSSCSCCCSEEEEEEECTTCCEEEEEESSCGGGCSSEEEEEEEC
T ss_pred CCCceeeEEEeecCCcccccccccCcceEEEECCCCCEEEEeccCCcccCCCCcEEEecC
Confidence 332 11122 1 123578999999999988876521 2335676653
No 349
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.71 E-value=0.2 Score=48.96 Aligned_cols=131 Identities=13% Similarity=0.087 Sum_probs=78.7
Q ss_pred CCEEEEEECCCeEEEEECCCCc------eeEEeecC--CCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEE------
Q psy14440 514 GYYFASAGHDRMARLWATDSYH------PLRLFVGH--YSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHV------ 579 (711)
Q Consensus 514 g~~l~sgs~Dg~i~lwd~~~~~------~~~~~~~h--~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v------ 579 (711)
..+|++...| +++.=..-+.. ....+ +. -..+.+++|||+|.+.++ .+|.+.-.+..++...
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~i-G~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~ 79 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLI-GKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRA 79 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEE-ESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHC
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhcccc-CccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccc
Confidence 3456666666 65554443322 11222 22 357889999999987777 6787777776552211
Q ss_pred EEe-e-CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC-Ce------EEEEeeCCCCCEEEEEEeCCCCEEEEEeCCC
Q psy14440 580 RLL-T-GHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN-GH------LLTLLTGHTDVVRALCFSRDGNILASSGQDC 650 (711)
Q Consensus 580 ~~~-~-~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~s-g~------~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg 650 (711)
..+ . +-+. ..++.|.++|.+.++ .||.|+-++-.+ +. -...-.+--..+..|.|.|+|.+.+.. ||
T Consensus 80 t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg 154 (236)
T 1tl2_A 80 KKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQ 154 (236)
T ss_dssp EEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TT
T ss_pred cEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CC
Confidence 111 1 1111 478899999988877 569998887533 11 011111122468999999999977766 77
Q ss_pred cEE
Q psy14440 651 SVK 653 (711)
Q Consensus 651 ~V~ 653 (711)
.++
T Consensus 155 ~ly 157 (236)
T 1tl2_A 155 QFY 157 (236)
T ss_dssp EEE
T ss_pred cEE
Confidence 743
No 350
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.37 E-value=0.71 Score=53.36 Aligned_cols=148 Identities=11% Similarity=0.086 Sum_probs=82.2
Q ss_pred CCCEEEEEeCC------CeEEEEECCCC--eEEEEEecCCCCEEEEEEcCCCCEEEEEECCC--eEEEEECCCCceeEEe
Q psy14440 471 DRSLLLSCSQD------NTIRLWSLLLW--RCLVVYKGHGHPVWDIKFSPHGYYFASAGHDR--MARLWATDSYHPLRLF 540 (711)
Q Consensus 471 dg~~L~s~s~D------g~V~iwdl~t~--~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg--~i~lwd~~~~~~~~~~ 540 (711)
++..++.||.+ ..+.+||..+. +.+..+......- +++...+++.++.||.++ .+.+||..+..= ..+
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h-~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W-~~~ 528 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRH-SACSLPDGNVLILGGVTEGPAMLLYNVTEEIF-KDV 528 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSC-EEEECTTSCEEEECCBCSSCSEEEEETTTTEE-EEC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccc-eEEEEcCCEEEEECCCCCCCCEEEEECCCCce-EEc
Confidence 66677777653 35888998764 3332222111111 223323778888888655 688999887531 111
Q ss_pred e------cCCCCeeEEEEcCC-CCEEEEEEc--C-----CcEEEEECCCCcE-----EEEeeC----CCCCeEEEEEecC
Q psy14440 541 V------GHYSDVDCVQFHPN-SNYVATGSS--D-----RTIRLWDCVTGSH-----VRLLTG----HKAPVYALSFSVC 597 (711)
Q Consensus 541 ~------~h~~~V~~v~~sp~-~~~latgs~--D-----g~I~iwD~~~~~~-----v~~~~~----h~~~I~~la~spd 597 (711)
. .......++.+..+ +..++.|+. + +.+.+||+.+..- ...+.. ...... ++...+
T Consensus 529 ~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~-~~~~~~ 607 (695)
T 2zwa_A 529 TPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQ-IKYITP 607 (695)
T ss_dssp CCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCE-EEEEET
T ss_pred cCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccce-EEEeCC
Confidence 1 12222334555555 566677765 2 3588999988761 122211 112222 233334
Q ss_pred CCEEEEEeC--------CCcEEEEECCCCeEE
Q psy14440 598 GRFLASAGG--------DGNVHMWDLSNGHLL 621 (711)
Q Consensus 598 g~~Lasgs~--------Dg~I~iwDl~sg~~i 621 (711)
+++++.||. ...|.+||+.+.+-.
T Consensus 608 ~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 608 RKLLIVGGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp TEEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred CEEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence 777777774 346999999887654
No 351
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.33 E-value=1.1 Score=51.85 Aligned_cols=189 Identities=10% Similarity=0.053 Sum_probs=101.0
Q ss_pred CCCCEEEEEeCC----CeEEEEECCCCeEEEEE-e-------cCCCCEEEEEEcCCCCEEEEEECCC------eEEEEEC
Q psy14440 470 PDRSLLLSCSQD----NTIRLWSLLLWRCLVVY-K-------GHGHPVWDIKFSPHGYYFASAGHDR------MARLWAT 531 (711)
Q Consensus 470 pdg~~L~s~s~D----g~V~iwdl~t~~~~~~~-~-------~h~~~V~~v~~sp~g~~l~sgs~Dg------~i~lwd~ 531 (711)
-++..++.||.+ ..+.+||..+.+-...- . .....-..+.+..+++.++.||.++ .+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456677777643 45888888765433222 1 1111222333322677778877543 5778888
Q ss_pred CCCc--eeEEeecCCCCeeEEEEcCCCCEEEEEEcCC--cEEEEECCCCcEEEEee-----CCCCCeEEEEEecC-CCEE
Q psy14440 532 DSYH--PLRLFVGHYSDVDCVQFHPNSNYVATGSSDR--TIRLWDCVTGSHVRLLT-----GHKAPVYALSFSVC-GRFL 601 (711)
Q Consensus 532 ~~~~--~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg--~I~iwD~~~~~~v~~~~-----~h~~~I~~la~spd-g~~L 601 (711)
.+.. .+..+..... -.+++...++..++.|+.++ .+.+||..++.-...-. .......++.+..+ ++.+
T Consensus 476 ~t~~W~~~~~~p~~R~-~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRF-RHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTEEEECCCCSBCCB-SCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCcEEECCCCCCCcc-cceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 7642 2211111111 12333323778888887654 79999998765322211 11222334555555 6677
Q ss_pred EEEeC--C-----CcEEEEECCCCe------EE--EEee-CCCCCEEEEEEeCCCCEEEEEeCC--------CcEEEEeC
Q psy14440 602 ASAGG--D-----GNVHMWDLSNGH------LL--TLLT-GHTDVVRALCFSRDGNILASSGQD--------CSVKLWDF 657 (711)
Q Consensus 602 asgs~--D-----g~I~iwDl~sg~------~i--~~l~-~h~~~V~sl~fspdg~~Lasgs~D--------g~V~iWdl 657 (711)
+.||. + +.+.+||+.+.+ -. .... ...... +++...++++++.||.+ ..|.+||+
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 633 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGS-QIKYITPRKLLIVGGTSPSGLFDRTNSIISLDP 633 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSC-EEEEEETTEEEEECCBCSSCCCCTTTSEEEEET
T ss_pred EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccc-eEEEeCCCEEEEECCccCCCCCCCCCeEEEEEC
Confidence 77765 2 358899998776 21 2211 111111 23333347788888753 45888888
Q ss_pred CCC
Q psy14440 658 AKL 660 (711)
Q Consensus 658 ~~~ 660 (711)
.+.
T Consensus 634 ~t~ 636 (695)
T 2zwa_A 634 LSE 636 (695)
T ss_dssp TTT
T ss_pred CCC
Confidence 764
No 352
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=93.04 E-value=8.4 Score=39.47 Aligned_cols=187 Identities=10% Similarity=0.086 Sum_probs=112.7
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEE---------EEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCC------
Q psy14440 470 PDRSLLLSCSQDNTIRLWSLLLWRCL---------VVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSY------ 534 (711)
Q Consensus 470 pdg~~L~s~s~Dg~V~iwdl~t~~~~---------~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~------ 534 (711)
++..++++.+.+|.|+--.+...... ..++. ...+..+........++..+..|.++-+....-
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke-~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLND-GDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCC-CCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 45667888889999988876543221 11222 234445555555667888888898887765321
Q ss_pred ---cee---EEeecCCCCeeEEEEcC---CCCEEEEEEcCCcEEEEECCC-------CcEEEEeeCCCCCeEEEEEecCC
Q psy14440 535 ---HPL---RLFVGHYSDVDCVQFHP---NSNYVATGSSDRTIRLWDCVT-------GSHVRLLTGHKAPVYALSFSVCG 598 (711)
Q Consensus 535 ---~~~---~~~~~h~~~V~~v~~sp---~~~~latgs~Dg~I~iwD~~~-------~~~v~~~~~h~~~I~~la~spdg 598 (711)
.++ ..+. ....|.++.... +..+|+..+..|.++...+.. |.....+.. .+.+..+....++
T Consensus 85 ~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~ 162 (312)
T 1suu_A 85 SKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKD 162 (312)
T ss_dssp ---CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTT
T ss_pred CCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCC
Confidence 110 0111 123344443332 467888999999999887642 222212222 4556666655556
Q ss_pred CEEEEEeCCCcEEEEECCC---------CeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q psy14440 599 RFLASAGGDGNVHMWDLSN---------GHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKL 660 (711)
Q Consensus 599 ~~Lasgs~Dg~I~iwDl~s---------g~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~ 660 (711)
..|+..+.+|.+..+.... |...-.+.. ...|.++....++..|++.+..|..+..++...
T Consensus 163 ~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e~ 232 (312)
T 1suu_A 163 EKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMSKI 232 (312)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGGGS
T ss_pred CEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHHHh
Confidence 6788888999999887643 222222322 345666666556677888899999999988764
No 353
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=92.85 E-value=11 Score=41.86 Aligned_cols=188 Identities=15% Similarity=0.216 Sum_probs=116.2
Q ss_pred CCCEEEEEeC-CCeEEEEECCCCeEEEEEec-CCCCEEEEEEc--CCCCEEEEEEC-------CCeE---------EE--
Q psy14440 471 DRSLLLSCSQ-DNTIRLWSLLLWRCLVVYKG-HGHPVWDIKFS--PHGYYFASAGH-------DRMA---------RL-- 528 (711)
Q Consensus 471 dg~~L~s~s~-Dg~V~iwdl~t~~~~~~~~~-h~~~V~~v~~s--p~g~~l~sgs~-------Dg~i---------~l-- 528 (711)
||++|+.-.. +..|...+++..++-..+.. ....+..+.|- |+..|+++++. ||.. .+
T Consensus 141 DGrylfiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~ 220 (638)
T 3sbq_A 141 DGKYLFINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYN 220 (638)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEE
T ss_pred eeEEEEEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEE
Confidence 7888888774 56788899999998877764 35678888886 57778888874 2221 11
Q ss_pred -EECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCC---------------cEEEEECC-------CC-----c--E
Q psy14440 529 -WATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR---------------TIRLWDCV-------TG-----S--H 578 (711)
Q Consensus 529 -wd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg---------------~I~iwD~~-------~~-----~--~ 578 (711)
.|.++.+....+. -.+....+...+++.+.++.|.+. .|.++|+. .| . -
T Consensus 221 ~iD~~tm~v~~Qv~-v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~g 299 (638)
T 3sbq_A 221 AIDAETMEMAFQVI-VDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSK 299 (638)
T ss_dssp EEETTTCSEEEEEE-ESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCC
T ss_pred EEcCCccEEEEEEE-cCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCC
Confidence 1222222111111 122344555677788877766432 25555532 11 0 1
Q ss_pred EEEeeCCC---------------CCeEEEEEecCCCEEEEEe-CCCcEEEEECCC------CeE-------EEEeeCCCC
Q psy14440 579 VRLLTGHK---------------APVYALSFSVCGRFLASAG-GDGNVHMWDLSN------GHL-------LTLLTGHTD 629 (711)
Q Consensus 579 v~~~~~h~---------------~~I~~la~spdg~~Lasgs-~Dg~I~iwDl~s------g~~-------i~~l~~h~~ 629 (711)
+..+.+.. .....+.++|||+++++++ .+.+|.++|+.+ ++. +.... -.-
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~Gl 378 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGL 378 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCS
T ss_pred eeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCC
Confidence 22332221 1223567899999988776 577999999874 221 33333 234
Q ss_pred CEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q psy14440 630 VVRALCFSRDGNILASSGQDCSVKLWDFAKL 660 (711)
Q Consensus 630 ~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~ 660 (711)
.....+|.++|+...|.--|..|.-|++...
T Consensus 379 GPlHt~Fd~~G~aYTtlfidSqvvkWni~~a 409 (638)
T 3sbq_A 379 GPLHTTFDGRGNAYTTLFIDSQVVKWNMEEA 409 (638)
T ss_dssp CEEEEEECSSSEEEEEETTTTEEEEEEHHHH
T ss_pred cccEEEECCCCceEeeeeecceEEEEeccHH
Confidence 5678899999976666778999999999764
No 354
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=92.48 E-value=0.44 Score=48.48 Aligned_cols=183 Identities=16% Similarity=0.043 Sum_probs=91.3
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCceeEEee
Q psy14440 462 PVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFV 541 (711)
Q Consensus 462 ~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~~~~~~ 541 (711)
.|..++...+. .++. . ||.|..|-......+-.-..-...|..|+...+ ..+.-+ ||.|+.|-....-.+-.-.
T Consensus 64 ~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~ 137 (282)
T 3qhy_B 64 GVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPA 137 (282)
T ss_dssp CCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCG
T ss_pred CEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCc
Confidence 45555554332 2222 4 788888865432111100011235777766543 344445 9999999765432222111
Q ss_pred cCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEE
Q psy14440 542 GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLL 621 (711)
Q Consensus 542 ~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i 621 (711)
.....|..|+...+ +.+.-. ||.|..|-......+..-..-...|..++...+ ..++. .||.|+.|-....-.+
T Consensus 138 ~~~~~i~~i~~G~~--~~~~l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~-hs~al--~~G~v~~wG~n~~gql 211 (282)
T 3qhy_B 138 EAQSGVTALDGGVY--TALAVK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIF-HSLAL--KDGKVIAWGDNRYKQT 211 (282)
T ss_dssp GGGSSEEEEEECSS--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS-EEEEE--ETTEEEEEECCTTSTT
T ss_pred cCCCCeEEEEcccC--EEEEEE-CCEEEEecCCCCCCCCCceecCCCeEEEEecCC-EEEEE--ECCeEEEEECCCCCCC
Confidence 22345666665432 333334 799999976542211111111345777766433 23333 5899999965432111
Q ss_pred EEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 622 TLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 622 ~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
..-......|..++...+. .++. . ||.|..|=...
T Consensus 212 g~p~~~~~~v~~i~~G~~h-~~al-~-~g~v~~wG~n~ 246 (282)
T 3qhy_B 212 TVPTEALSGVSAIASGEWY-SLAL-K-NGKVIAWGSSR 246 (282)
T ss_dssp CCCGGGGSSCCEEEECSSC-EEEE-E-TTEEEEESTTC
T ss_pred CCCcccCCCceEEEcCCCE-EEEE-E-CCEEEEecCCC
Confidence 1000111346666654333 3333 3 99999997654
No 355
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=90.81 E-value=27 Score=40.09 Aligned_cols=173 Identities=12% Similarity=0.051 Sum_probs=91.6
Q ss_pred CeEEEEECCCC--eEEEEEecCCCCE-EEEEEcCCCC-----EEEEEECC---CeEEEEECCC--CceeEEeecCCCCee
Q psy14440 482 NTIRLWSLLLW--RCLVVYKGHGHPV-WDIKFSPHGY-----YFASAGHD---RMARLWATDS--YHPLRLFVGHYSDVD 548 (711)
Q Consensus 482 g~V~iwdl~t~--~~~~~~~~h~~~V-~~v~~sp~g~-----~l~sgs~D---g~i~lwd~~~--~~~~~~~~~h~~~V~ 548 (711)
..|+.|.+-+. +-...+.+....+ .++..+.++. .+++.+.+ ..+.+.+.+. +. +..+.... ..
T Consensus 216 ~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~-~~- 292 (711)
T 4hvt_A 216 NSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKINMPS-DA- 292 (711)
T ss_dssp CEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECCSCT-TC-
T ss_pred CEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEeecCC-cc-
Confidence 56888887553 2344565544433 2344556655 24444422 3455556543 32 22222111 11
Q ss_pred EEEEcCCCCEEEEE----------EcCCcEEEEECCCC-------cEEEE-ee-CCCCCeEEEEEecCCCEEEEEeCCC-
Q psy14440 549 CVQFHPNSNYVATG----------SSDRTIRLWDCVTG-------SHVRL-LT-GHKAPVYALSFSVCGRFLASAGGDG- 608 (711)
Q Consensus 549 ~v~~sp~~~~latg----------s~Dg~I~iwD~~~~-------~~v~~-~~-~h~~~I~~la~spdg~~Lasgs~Dg- 608 (711)
.+..+.++.+++.. ...+.|.+.|+.++ ...+. +. .....+..++|..+ .++++...++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~~~ 371 (711)
T 4hvt_A 293 TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYDNVV 371 (711)
T ss_dssp EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEETTE
T ss_pred eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEECCE
Confidence 22334455554422 24677999998764 22333 32 23446778888865 5666776676
Q ss_pred -cEEEEECCCCe-EEEE-eeCC-CCCEEEEEEeCCCC-EEEEEeC---CCcEEEEeCC
Q psy14440 609 -NVHMWDLSNGH-LLTL-LTGH-TDVVRALCFSRDGN-ILASSGQ---DCSVKLWDFA 658 (711)
Q Consensus 609 -~I~iwDl~sg~-~i~~-l~~h-~~~V~sl~fspdg~-~Lasgs~---Dg~V~iWdl~ 658 (711)
.|.++|+.+|+ .+.. +... .+.+....+++++. ++++.+. -+.+..+|+.
T Consensus 372 ~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 372 AKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 57788877775 2233 2221 24576667767665 4555443 2567777765
No 356
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=90.71 E-value=3.1 Score=42.10 Aligned_cols=167 Identities=16% Similarity=0.037 Sum_probs=84.5
Q ss_pred CcEEEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCEEEEEEcCCCCEEE
Q psy14440 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFA 518 (711)
Q Consensus 439 d~~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h~~~V~~v~~sp~g~~l~ 518 (711)
++.++.|-....-....-..-...|..++...+. .+.-. ||.|..|-......+-.-......|..++..... .++
T Consensus 80 ~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~h--s~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~-~~~ 155 (282)
T 3qhy_B 80 DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAWA--SYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYT-ALA 155 (282)
T ss_dssp TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETTE--EEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE-EEE
T ss_pred CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCCE--EEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCE-EEE
Confidence 7788888644321111001112467777775443 33334 8999999764321111111123456666654332 233
Q ss_pred EEECCCeEEEEECCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeCCCCCeEEEEEecCC
Q psy14440 519 SAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCG 598 (711)
Q Consensus 519 sgs~Dg~i~lwd~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~h~~~I~~la~spdg 598 (711)
-. ||.+..|-......+..-......|..|+...+ ..++. .||.|..|-......+-.-......|..|+...+.
T Consensus 156 -l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~-hs~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h 230 (282)
T 3qhy_B 156 -VK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIF-HSLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWY 230 (282)
T ss_dssp -EE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS-EEEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSC
T ss_pred -EE-CCEEEEecCCCCCCCCCceecCCCeEEEEecCC-EEEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCE
Confidence 34 799999976643222111112345666665432 23444 59999999754432211111112356677654433
Q ss_pred CEEEEEeCCCcEEEEECCC
Q psy14440 599 RFLASAGGDGNVHMWDLSN 617 (711)
Q Consensus 599 ~~Lasgs~Dg~I~iwDl~s 617 (711)
.++.. ||.|+.|-...
T Consensus 231 -~~al~--~g~v~~wG~n~ 246 (282)
T 3qhy_B 231 -SLALK--NGKVIAWGSSR 246 (282)
T ss_dssp -EEEEE--TTEEEEESTTC
T ss_pred -EEEEE--CCEEEEecCCC
Confidence 33333 89999996544
No 357
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=88.80 E-value=25 Score=36.72 Aligned_cols=183 Identities=9% Similarity=0.019 Sum_probs=90.7
Q ss_pred cCCEEEEEEcC-CCCEEEEEeCCC----eEEEEEC--CCCeEEEE---Eec--------CCCCEEEEEEcCC--CCEEEE
Q psy14440 460 EGPVRKLSFSP-DRSLLLSCSQDN----TIRLWSL--LLWRCLVV---YKG--------HGHPVWDIKFSPH--GYYFAS 519 (711)
Q Consensus 460 ~~~V~~l~fsp-dg~~L~s~s~Dg----~V~iwdl--~t~~~~~~---~~~--------h~~~V~~v~~sp~--g~~l~s 519 (711)
...|.+|++.+ +...|++++..| .|...+- .+++.+.. +.. +...|+++++.+. ...+.+
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~ 133 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA 133 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred CCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEE
Confidence 34689999998 334455555444 3444321 23333221 110 1135788999862 445555
Q ss_pred EECCCeEEEEECCCCceeEEeec-------------------CCCCeeEEEEcC-CCCEEEEEEcCCcEEEEECCCCcEE
Q psy14440 520 AGHDRMARLWATDSYHPLRLFVG-------------------HYSDVDCVQFHP-NSNYVATGSSDRTIRLWDCVTGSHV 579 (711)
Q Consensus 520 gs~Dg~i~lwd~~~~~~~~~~~~-------------------h~~~V~~v~~sp-~~~~latgs~Dg~I~iwD~~~~~~v 579 (711)
++..+.|...+ +.++....+.. ....+.+|.++| +...|+.+..++.|...+ ..|+..
T Consensus 134 g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW 211 (394)
T 3b7f_A 134 GTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDW 211 (394)
T ss_dssp EEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEES-STTSSC
T ss_pred EecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCc
Confidence 55556554432 33332222211 123578999987 345555555455444432 233333
Q ss_pred EEeeC-C------------CCCeEEEEEecC-CCEEEEEeCCCcEEEEECCCCeEEEEeeC--CC---CCEEEEEEeC-C
Q psy14440 580 RLLTG-H------------KAPVYALSFSVC-GRFLASAGGDGNVHMWDLSNGHLLTLLTG--HT---DVVRALCFSR-D 639 (711)
Q Consensus 580 ~~~~~-h------------~~~I~~la~spd-g~~Lasgs~Dg~I~iwDl~sg~~i~~l~~--h~---~~V~sl~fsp-d 639 (711)
..+.. - ...+.+|+++++ ...|++++..| |...+ ..|+....+.. .. ..+.++++++ +
T Consensus 212 ~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~-D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~ 289 (394)
T 3b7f_A 212 KPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMD-RREGVWKRIGDAMPREVGDIGFPIVVHQRD 289 (394)
T ss_dssp EECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEE-TTTTEEECGGGGSCTTTCSCEEEEEECSSC
T ss_pred eECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeC-CCCCcceECCCCCCCCCccceEEEEECCCC
Confidence 33221 0 124889999885 45666666544 55444 23443333321 11 3456788875 3
Q ss_pred CCEEEEE
Q psy14440 640 GNILASS 646 (711)
Q Consensus 640 g~~Lasg 646 (711)
...|..+
T Consensus 290 ~~~l~~~ 296 (394)
T 3b7f_A 290 PRTVWVF 296 (394)
T ss_dssp TTCEEEE
T ss_pred CCEEEEE
Confidence 3334444
No 358
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=85.59 E-value=31 Score=34.46 Aligned_cols=196 Identities=9% Similarity=0.029 Sum_probs=111.2
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEE---ECCCCeEEEEEecCCCCEEEEEEcC-CCCEEEEEECCCeEEEEECCCCc--
Q psy14440 462 PVRKLSFSPDRSLLLSCSQDNTIRLW---SLLLWRCLVVYKGHGHPVWDIKFSP-HGYYFASAGHDRMARLWATDSYH-- 535 (711)
Q Consensus 462 ~V~~l~fspdg~~L~s~s~Dg~V~iw---dl~t~~~~~~~~~h~~~V~~v~~sp-~g~~l~sgs~Dg~i~lwd~~~~~-- 535 (711)
.+..+.......+|+..+.+|.++-- ++........+. ....|..+.... +..+++..+.+|.++........
T Consensus 25 ~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~ 103 (276)
T 3no0_A 25 PVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYK 103 (276)
T ss_dssp CEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTC
T ss_pred eEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhh
Confidence 34444333344456566666655433 222111100122 345565554421 46799999999999999875432
Q ss_pred --eeE--EeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCC-------CcEEEEee-CCCCCeEEEEEecCCCEEEE
Q psy14440 536 --PLR--LFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT-------GSHVRLLT-GHKAPVYALSFSVCGRFLAS 603 (711)
Q Consensus 536 --~~~--~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~-------~~~v~~~~-~h~~~I~~la~spdg~~Las 603 (711)
-+. .+. ....+..+....+...++..+..|.+..+.... +.-++.+. .....|.++....++.+++.
T Consensus 104 ~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~ 182 (276)
T 3no0_A 104 AQGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLV 182 (276)
T ss_dssp STTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEE
T ss_pred cCCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEE
Confidence 111 122 223455555555666888899999988887532 11122221 12355666665566778889
Q ss_pred EeCCCcEEEEECCC-------CeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEE--EeCCCC
Q psy14440 604 AGGDGNVHMWDLSN-------GHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKL--WDFAKL 660 (711)
Q Consensus 604 gs~Dg~I~iwDl~s-------g~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~i--Wdl~~~ 660 (711)
.+..|.++...+.. ++-+..+ ...+.+..+....+...++..+.+|.+.. +++...
T Consensus 183 ~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~~i 247 (276)
T 3no0_A 183 ITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQKDI 247 (276)
T ss_dssp EETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGGGS
T ss_pred EeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHHHC
Confidence 99999999887632 2333333 23345555544444456777788888877 877543
No 359
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=84.30 E-value=42 Score=34.90 Aligned_cols=172 Identities=12% Similarity=0.021 Sum_probs=87.5
Q ss_pred CEEEEEeCCCeEEEEECC----CCeEEEEEecCCCCEEEEEEcC--CCCEEEEEECCC----eEEEEECCCCceeEEeec
Q psy14440 473 SLLLSCSQDNTIRLWSLL----LWRCLVVYKGHGHPVWDIKFSP--HGYYFASAGHDR----MARLWATDSYHPLRLFVG 542 (711)
Q Consensus 473 ~~L~s~s~Dg~V~iwdl~----t~~~~~~~~~h~~~V~~v~~sp--~g~~l~sgs~Dg----~i~lwd~~~~~~~~~~~~ 542 (711)
..|++|+..| +.+++.. +++.... ......|.+|++.| .+..++ ++..| .|.. ..+.++.-..+..
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~-~~~~~~v~~i~~dp~~~~~l~~-g~~~g~~g~gl~~-s~D~G~tW~~~~~ 98 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGP-VFLGHTIHHIVQDPREPERMLM-AARTGHLGPTVFR-SDDGGGNWTEATR 98 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEE-ESTTSEEEEEEECSSSTTCEEE-EEEC--CCEEEEE-ESSTTSCCEECSB
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCc-cCCCCceEEEEECCCCCCeEEE-EecCCCCCccEEE-eCCCCCCceECCc
Confidence 3677777776 5555432 3443321 12356799999998 444444 44444 3333 3333332222211
Q ss_pred --------------CCCCeeEEEEcC-C-CCEEEEEEcCCcEEEEECCCCcEEEEeeC-------------------CCC
Q psy14440 543 --------------HYSDVDCVQFHP-N-SNYVATGSSDRTIRLWDCVTGSHVRLLTG-------------------HKA 587 (711)
Q Consensus 543 --------------h~~~V~~v~~sp-~-~~~latgs~Dg~I~iwD~~~~~~v~~~~~-------------------h~~ 587 (711)
....|.++++.| + ...|.+++..+.|...+ ..|+....+.. ...
T Consensus 99 ~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~ 177 (394)
T 3b7f_A 99 PPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGP 177 (394)
T ss_dssp CCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCC
T ss_pred cccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCC
Confidence 112477888886 2 45666666566555443 23333333221 123
Q ss_pred CeEEEEEecC-CCEEEEEeCCCcEEEEECCCCeEEEEeeC-----C--------CCCEEEEEEeCC-CCEEEEEeCCC
Q psy14440 588 PVYALSFSVC-GRFLASAGGDGNVHMWDLSNGHLLTLLTG-----H--------TDVVRALCFSRD-GNILASSGQDC 650 (711)
Q Consensus 588 ~I~~la~spd-g~~Lasgs~Dg~I~iwDl~sg~~i~~l~~-----h--------~~~V~sl~fspd-g~~Lasgs~Dg 650 (711)
.+.+|.+++. ...|+.+..++.|...+ ..|+....+.. + ...+.+|+++++ ...|+.++..|
T Consensus 178 ~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g 254 (394)
T 3b7f_A 178 KMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG 254 (394)
T ss_dssp EEEEEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE
T ss_pred ceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe
Confidence 5788999873 34455555445454443 22332222211 0 124889999885 35666666544
No 360
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=83.77 E-value=46 Score=34.95 Aligned_cols=164 Identities=9% Similarity=0.067 Sum_probs=98.7
Q ss_pred eEEEEECCCC--eEEEEEecC------CCCEEEEEEc---CC----CCE-EEEEECCCeEEEEECCCCceeEEeec----
Q psy14440 483 TIRLWSLLLW--RCLVVYKGH------GHPVWDIKFS---PH----GYY-FASAGHDRMARLWATDSYHPLRLFVG---- 542 (711)
Q Consensus 483 ~V~iwdl~t~--~~~~~~~~h------~~~V~~v~~s---p~----g~~-l~sgs~Dg~i~lwd~~~~~~~~~~~~---- 542 (711)
.|.+||+.+. +.++.+.-. .+.+.++.+. +. +.+ .++-+..+-|.++|+.+++..|....
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 5788899888 888877632 3457788877 22 223 33334577899999998877765521
Q ss_pred C--------------CCCeeEEEEcCC----CCEEEEEEcCCcEEEEECC-----CC---cEEEEee--CCCCCeEEEEE
Q psy14440 543 H--------------YSDVDCVQFHPN----SNYVATGSSDRTIRLWDCV-----TG---SHVRLLT--GHKAPVYALSF 594 (711)
Q Consensus 543 h--------------~~~V~~v~~sp~----~~~latgs~Dg~I~iwD~~-----~~---~~v~~~~--~h~~~I~~la~ 594 (711)
. ...|..|+++|+ ++.|..+...+. ++|.+. .. ..++.+- +..+.-..+++
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~-~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~ 282 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI-KVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAY 282 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS-EEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC-cEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEE
Confidence 0 236788888887 677776664442 333332 11 2222221 11233445677
Q ss_pred e-cCCCEEEEEeCCCcEEEEECCC-----CeEEEEeeC-CCCCEEEEEEeCCCCEEEEEe
Q psy14440 595 S-VCGRFLASAGGDGNVHMWDLSN-----GHLLTLLTG-HTDVVRALCFSRDGNILASSG 647 (711)
Q Consensus 595 s-pdg~~Lasgs~Dg~I~iwDl~s-----g~~i~~l~~-h~~~V~sl~fspdg~~Lasgs 647 (711)
+ .+|.++++--..+.|..|+..+ +........ .-..+.++.+..+|.+.+..+
T Consensus 283 D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 283 DPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp CTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEEC
T ss_pred eCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEEC
Confidence 5 6787777777888999999875 122222222 224577888777776555553
No 361
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=82.93 E-value=0.26 Score=52.84 Aligned_cols=6 Identities=17% Similarity=0.146 Sum_probs=3.1
Q ss_pred HHHhhc
Q psy14440 250 RHLQEK 255 (711)
Q Consensus 250 ~~l~~~ 255 (711)
.||+++
T Consensus 175 ~~LH~~ 180 (400)
T 1nxk_A 175 QYLHSI 180 (400)
T ss_dssp HHHHHT
T ss_pred HHHHHC
Confidence 455554
No 362
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=79.03 E-value=18 Score=39.22 Aligned_cols=111 Identities=12% Similarity=0.115 Sum_probs=64.8
Q ss_pred eecCCCCeeEEEEcCCCC-EEEEEEcCCcEEEEECCCCc---EEEEee-----C----CCCCeEEEEEecC----CCEEE
Q psy14440 540 FVGHYSDVDCVQFHPNSN-YVATGSSDRTIRLWDCVTGS---HVRLLT-----G----HKAPVYALSFSVC----GRFLA 602 (711)
Q Consensus 540 ~~~h~~~V~~v~~sp~~~-~latgs~Dg~I~iwD~~~~~---~v~~~~-----~----h~~~I~~la~spd----g~~La 602 (711)
+......-..|+|.|++. .|+++...|.|++++..... .+..+. + .......|+|+|+ +.+.+
T Consensus 9 va~gL~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv 88 (463)
T 2wg3_C 9 VVSGLRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYV 88 (463)
T ss_dssp EEEEESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEE
T ss_pred eccCCCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEE
Confidence 333345567899999986 45566778999999753221 122211 1 1456889999996 44333
Q ss_pred EEeC--C----------CcEEEEECCC----------CeEEEEee--CCCCCEEEEEEeCCCCEEEEEeCCC
Q psy14440 603 SAGG--D----------GNVHMWDLSN----------GHLLTLLT--GHTDVVRALCFSRDGNILASSGQDC 650 (711)
Q Consensus 603 sgs~--D----------g~I~iwDl~s----------g~~i~~l~--~h~~~V~sl~fspdg~~Lasgs~Dg 650 (711)
+-+. + ..|.-|.+.. .+.+..+. ........|+|.|||.+.++.|..+
T Consensus 89 ~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 89 SYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp EEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred EEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 3221 1 1454465532 23443332 1122357899999999888776543
No 363
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=79.01 E-value=28 Score=41.53 Aligned_cols=38 Identities=16% Similarity=0.189 Sum_probs=33.8
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEee
Q psy14440 588 PVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLT 625 (711)
Q Consensus 588 ~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~ 625 (711)
.+.+++..++..++++-+.|+++++|++.+|+++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 56778888888999999999999999999999988764
No 364
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=78.90 E-value=62 Score=33.18 Aligned_cols=145 Identities=8% Similarity=0.033 Sum_probs=89.2
Q ss_pred CCCEEEEEeCCCeEEEEECCCCe-------EEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECC--CCce-----
Q psy14440 471 DRSLLLSCSQDNTIRLWSLLLWR-------CLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATD--SYHP----- 536 (711)
Q Consensus 471 dg~~L~s~s~Dg~V~iwdl~t~~-------~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~--~~~~----- 536 (711)
+..+++.++.+|.|+...+.... ....++. ...+..+........++..+..|.+..+... .-..
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a 186 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRAT 186 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTS
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCC
Confidence 57799999999999998875422 2222333 3445555555556688888999999888776 3211
Q ss_pred --eEEee-cCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCC-------cEEEEee--CCCCCeEEEEEecCCCEEEEE
Q psy14440 537 --LRLFV-GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTG-------SHVRLLT--GHKAPVYALSFSVCGRFLASA 604 (711)
Q Consensus 537 --~~~~~-~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~-------~~v~~~~--~h~~~I~~la~spdg~~Lasg 604 (711)
++.+. .....|.++.....+.+++..+..|.++.-.+..- +-+..+. .-.+.+..+....+...++..
T Consensus 187 ~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~ 266 (327)
T 3uc1_A 187 SGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAV 266 (327)
T ss_dssp BCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEE
T ss_pred CCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEE
Confidence 11111 12345666666666779999999999988775321 2233232 113345554444445566667
Q ss_pred eCCCcEEEEECC
Q psy14440 605 GGDGNVHMWDLS 616 (711)
Q Consensus 605 s~Dg~I~iwDl~ 616 (711)
+.+|.+.-++..
T Consensus 267 T~~G~~ir~~~~ 278 (327)
T 3uc1_A 267 TSGGGVIRTAAR 278 (327)
T ss_dssp EGGGCEEEEEGG
T ss_pred cCCCeEEEEehh
Confidence 777877777654
No 365
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=78.05 E-value=29 Score=41.33 Aligned_cols=38 Identities=18% Similarity=0.192 Sum_probs=33.6
Q ss_pred CeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEee
Q psy14440 546 DVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLT 583 (711)
Q Consensus 546 ~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~ 583 (711)
.+.+++..++..++++-+.|+++|||++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46778888888999999999999999999999988753
No 366
>1uuj_A Platelet-activating factor acetylhydrolase IB ALP subunit; mitosis, neuroge cytoskeleton, cell division, microtubule; 1.75A {Mus musculus} SCOP: a.221.1.1
Probab=76.38 E-value=1.6 Score=35.67 Aligned_cols=28 Identities=21% Similarity=0.284 Sum_probs=24.5
Q ss_pred HHH-HHHHHHhhCCCchhHHHHHhhhccC
Q psy14440 91 TLI-TMLKLLRQYNLRGTEEQLKKEINVN 118 (711)
Q Consensus 91 ~~~-~v~~yl~k~g~~~~e~~l~~e~~~~ 118 (711)
+|. +|++||...||.++.++||+|+++.
T Consensus 12 EL~kaI~~YL~~~~~~~~~~alr~e~~~~ 40 (88)
T 1uuj_A 12 ELNRAIADYLRSNGYEEAYSVFKKEAELD 40 (88)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHhcCC
Confidence 444 8999999999999999999998654
No 367
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=76.16 E-value=65 Score=32.04 Aligned_cols=144 Identities=10% Similarity=0.040 Sum_probs=85.7
Q ss_pred CCCEEEEEeCCCeEEEEECCCCe------EEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCce-------e
Q psy14440 471 DRSLLLSCSQDNTIRLWSLLLWR------CLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHP-------L 537 (711)
Q Consensus 471 dg~~L~s~s~Dg~V~iwdl~t~~------~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~~-------~ 537 (711)
+..+++.++.+|.|+...+.... ....++. ...+..+........++..+..|.+..+....-.. +
T Consensus 79 ~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv 157 (276)
T 3no0_A 79 FGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGV 157 (276)
T ss_dssp SCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCE
T ss_pred CCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCE
Confidence 46789999999999999875532 1122332 34555565555566888999999988887643211 1
Q ss_pred EEee-cCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCC-------CcEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCc
Q psy14440 538 RLFV-GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT-------GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGN 609 (711)
Q Consensus 538 ~~~~-~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~-------~~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~ 609 (711)
..+. .....|..+....++.+++..+..|.++...+.. ++-+..+ ...+.+..+....+...++..+.+|.
T Consensus 158 ~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~ 236 (276)
T 3no0_A 158 QGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGK 236 (276)
T ss_dssp ECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSC
T ss_pred EEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCe
Confidence 1111 1234455555555667899999999988887632 2223333 22344444433333445566666676
Q ss_pred EEE--EECC
Q psy14440 610 VHM--WDLS 616 (711)
Q Consensus 610 I~i--wDl~ 616 (711)
+.. ++..
T Consensus 237 ~ir~~~~~~ 245 (276)
T 3no0_A 237 AFYDKINQK 245 (276)
T ss_dssp EEEEEEEGG
T ss_pred EEEeeeCHH
Confidence 666 6543
No 368
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=75.52 E-value=76 Score=32.48 Aligned_cols=156 Identities=9% Similarity=0.067 Sum_probs=94.6
Q ss_pred CCEEEEE-EcC--CCCEEEEEECCCeEEEEECCCCce-----e--EEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEE
Q psy14440 503 HPVWDIK-FSP--HGYYFASAGHDRMARLWATDSYHP-----L--RLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWD 572 (711)
Q Consensus 503 ~~V~~v~-~sp--~g~~l~sgs~Dg~i~lwd~~~~~~-----~--~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD 572 (711)
..|..+. ... +..++++++.+|.++...+..... + ..+.. ...+..+........|+..+..|.+..+.
T Consensus 95 e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~ 173 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFS 173 (327)
T ss_dssp CCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEE
T ss_pred CEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEE
Confidence 3454443 332 467999999999999987654221 1 12222 23444454445567888889999988887
Q ss_pred CC--C----Cc---EEEEee-CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC-------CeEEEEee--CCCCCEEE
Q psy14440 573 CV--T----GS---HVRLLT-GHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN-------GHLLTLLT--GHTDVVRA 633 (711)
Q Consensus 573 ~~--~----~~---~v~~~~-~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~s-------g~~i~~l~--~h~~~V~s 633 (711)
+. . ++ -++.+. .....|.++....++.+|+..+..|.++.-.+.. ++-+..++ .-.+.+-.
T Consensus 174 ~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~ 253 (327)
T 3uc1_A 174 ATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVG 253 (327)
T ss_dssp CCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEE
T ss_pred CcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEE
Confidence 66 2 11 122121 1345577776666677899999999998887532 12222222 21344555
Q ss_pred EEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 634 LCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 634 l~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
+....+...++..+.+|.+.-+++..
T Consensus 254 ~~~~~~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 254 ALIVDDDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp EEEECTTCEEEEEEGGGCEEEEEGGG
T ss_pred EEEeCCCccEEEEcCCCeEEEEehhh
Confidence 55554556677778888888787654
No 369
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=74.74 E-value=89 Score=35.77 Aligned_cols=191 Identities=11% Similarity=0.051 Sum_probs=101.5
Q ss_pred EEEE-EcCCCCEEEEE-e----CCCeEEEEECCCCeEEEE-Ee-cCCC------CEEEEEEcCCCCEEEEE---------
Q psy14440 464 RKLS-FSPDRSLLLSC-S----QDNTIRLWSLLLWRCLVV-YK-GHGH------PVWDIKFSPHGYYFASA--------- 520 (711)
Q Consensus 464 ~~l~-fspdg~~L~s~-s----~Dg~V~iwdl~t~~~~~~-~~-~h~~------~V~~v~~sp~g~~l~sg--------- 520 (711)
..+. +++++++++.+ | .-.+|+++|+.+++.+.. +. .-.. ....++|..+...+++.
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~ 211 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITS 211 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCT
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCc
Confidence 3444 78898876654 2 234699999999887631 11 0000 01234776433333332
Q ss_pred -ECCCeEEEEECCCC--ceeEEeecCCCCee-EEEEcCCCCE-----EEEEEcC---CcEEEEECCC--CcEEEEeeCCC
Q psy14440 521 -GHDRMARLWATDSY--HPLRLFVGHYSDVD-CVQFHPNSNY-----VATGSSD---RTIRLWDCVT--GSHVRLLTGHK 586 (711)
Q Consensus 521 -s~Dg~i~lwd~~~~--~~~~~~~~h~~~V~-~v~~sp~~~~-----latgs~D---g~I~iwD~~~--~~~v~~~~~h~ 586 (711)
+....|+.|.+-+. +...++.+...++. ....+.++.+ +++.+.+ ..+.+.|... +..+.......
T Consensus 212 ~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 291 (711)
T 4hvt_A 212 SLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPSD 291 (711)
T ss_dssp TSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCTT
T ss_pred CCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCCc
Confidence 12357888887654 23445655544442 3344556552 3433322 3456666553 43333322222
Q ss_pred CCeEEEEEecCCCEEEEE----------eCCCcEEEEECCCCe-------EEEE-ee-CCCCCEEEEEEeCCCCEEEEEe
Q psy14440 587 APVYALSFSVCGRFLASA----------GGDGNVHMWDLSNGH-------LLTL-LT-GHTDVVRALCFSRDGNILASSG 647 (711)
Q Consensus 587 ~~I~~la~spdg~~Lasg----------s~Dg~I~iwDl~sg~-------~i~~-l~-~h~~~V~sl~fspdg~~Lasgs 647 (711)
.. +..+.++.+++.. ...+.|.+.|+.++. .... +. .....+.+++|..+ .++++..
T Consensus 292 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~ 367 (711)
T 4hvt_A 292 AT---LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATY 367 (711)
T ss_dssp CE---EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEE
T ss_pred ce---EeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEE
Confidence 11 2344566655533 146789999987631 1222 32 22346778888865 6777777
Q ss_pred CCCc--EEEEeCC
Q psy14440 648 QDCS--VKLWDFA 658 (711)
Q Consensus 648 ~Dg~--V~iWdl~ 658 (711)
.+|. |.++|+.
T Consensus 368 ~~~~~~l~~~~~~ 380 (711)
T 4hvt_A 368 DNVVAKVVTFTLE 380 (711)
T ss_dssp ETTEEEEEEECEE
T ss_pred ECCEEEEEEEECC
Confidence 7775 6667654
No 370
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=73.99 E-value=1.3e+02 Score=34.64 Aligned_cols=104 Identities=9% Similarity=0.068 Sum_probs=50.3
Q ss_pred CCEEEEEEcCC-CCEEEEEeCCCe----EEEE-ECCCCeEEEEEecC---------CCCEEEEEEcCC-CCEEEEEECCC
Q psy14440 461 GPVRKLSFSPD-RSLLLSCSQDNT----IRLW-SLLLWRCLVVYKGH---------GHPVWDIKFSPH-GYYFASAGHDR 524 (711)
Q Consensus 461 ~~V~~l~fspd-g~~L~s~s~Dg~----V~iw-dl~t~~~~~~~~~h---------~~~V~~v~~sp~-g~~l~sgs~Dg 524 (711)
..|.+|++++. ...++.+..+.. -.|| ..+.++.-...... ...+..++++|. ...++.+...+
T Consensus 64 ~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~ 143 (789)
T 1sqj_A 64 MGTESIALDPNNPDRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTE 143 (789)
T ss_dssp CSEEEEEEETTEEEEEEEEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSS
T ss_pred CceeEEEECCCCCCEEEEEeCccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccC
Confidence 46888888874 334444432211 2233 33333332222210 013456777774 34555555343
Q ss_pred eEEEEECCCCceeEEeec------CCCCeeEEEEcC-CCCEEEEEEcC
Q psy14440 525 MARLWATDSYHPLRLFVG------HYSDVDCVQFHP-NSNYVATGSSD 565 (711)
Q Consensus 525 ~i~lwd~~~~~~~~~~~~------h~~~V~~v~~sp-~~~~latgs~D 565 (711)
.| +...+.++.-..+.. ....+.++.++| ++..++++..+
T Consensus 144 gl-~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 144 GI-WKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp CE-EEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESS
T ss_pred CE-EEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcC
Confidence 32 234444443333321 124578899988 44566666654
No 371
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=68.34 E-value=1.1e+02 Score=31.07 Aligned_cols=238 Identities=10% Similarity=0.008 Sum_probs=124.6
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEEEEEcCCCCEEE
Q psy14440 397 EDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLL 476 (711)
Q Consensus 397 ~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~L~ 476 (711)
++..++++.+.+|+|+--.+..-+.. .... .+.....+... ..+..+........++
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~--~~~~--------------------~g~~~~~lke~-D~l~~~~~~~~~~~ll 62 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQ--GTGG--------------------KGLSSFDLNDG-DEIVIALCVNTHDYLF 62 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBC--CSSC--------------------CCEECCCCCTT-CCEEEEEEEETTCEEE
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhcc--ccCC--------------------CCceecccCCC-CEEEEEEEECCCCEEE
Confidence 45677889999999997765321100 0000 00000011111 2233333333455667
Q ss_pred EEeCCCeEEEEECCCCeEE------------EEEecCCCCEEEEEEcC---CCCEEEEEECCCeEEEEECCCCc------
Q psy14440 477 SCSQDNTIRLWSLLLWRCL------------VVYKGHGHPVWDIKFSP---HGYYFASAGHDRMARLWATDSYH------ 535 (711)
Q Consensus 477 s~s~Dg~V~iwdl~t~~~~------------~~~~~h~~~V~~v~~sp---~g~~l~sgs~Dg~i~lwd~~~~~------ 535 (711)
..+..|.++-+....-... ..+. ....|..+.... ++.+++..+..|.++...+....
T Consensus 63 ~~T~~G~~~~~~~~~ip~~~r~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G 141 (312)
T 1suu_A 63 MISNEGKLYLINAYEIKDSSRASKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRG 141 (312)
T ss_dssp EEETTSEEEEEEGGGSCC-------CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----C
T ss_pred EEECCCeEEEEEHHHCCCCCccCCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCc
Confidence 7777777666654211100 0111 123344443332 45688999999999998774322
Q ss_pred -eeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCC-------CcEEEEeeC-CCCCeEEEEEecCCCEEEEEeC
Q psy14440 536 -PLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT-------GSHVRLLTG-HKAPVYALSFSVCGRFLASAGG 606 (711)
Q Consensus 536 -~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~-------~~~v~~~~~-h~~~I~~la~spdg~~Lasgs~ 606 (711)
....+.. ...+..+.....+..++..+.+|.+..+.+.. ++-++.+.- ....|.++..-.++..|++.+.
T Consensus 142 ~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~ 220 (312)
T 1suu_A 142 VIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSE 220 (312)
T ss_dssp EECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEET
T ss_pred EEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEEC
Confidence 1112222 34555555555567888899999998887643 112333321 2345666655556677888899
Q ss_pred CCcEEEEECCC-------CeEEEEee---CCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 607 DGNVHMWDLSN-------GHLLTLLT---GHTDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 607 Dg~I~iwDl~s-------g~~i~~l~---~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
.|..+..++.. ++=+..++ ...+.+.++....++.-+...+..|.+.-..+..
T Consensus 221 ~G~~kr~~~~e~~~~~R~~kGv~~~~~~k~~~~~lv~~~~~~~~~~l~~~t~~g~~~r~~~~~ 283 (312)
T 1suu_A 221 NGYGKRLNMSKISELKRGATGYTSYKKSDKKAGSVVDAIAVSEDDEILLVSKRSKALRTVAGK 283 (312)
T ss_dssp TSEEEEEEGGGSCBCCTTCCCEECSCTTCTTTCSEEEEEEECTTCEEEEEETTCEEEEEEGGG
T ss_pred CCceEEEEHHHhcccCCCCCCEEeeEccCCCCCeEEEEEEeCCCCEEEEEeCCCeEEEEEccc
Confidence 99999888743 12222222 2234454443333445555566677554444443
No 372
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=67.84 E-value=1.2e+02 Score=31.51 Aligned_cols=192 Identities=15% Similarity=0.128 Sum_probs=104.0
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-----------eEEEEEec-CCCCEEEEEEcCCCCEEEEEECCCeEEEE
Q psy14440 462 PVRKLSFSPDRSLLLSCSQDNTIRLWSLLLW-----------RCLVVYKG-HGHPVWDIKFSPHGYYFASAGHDRMARLW 529 (711)
Q Consensus 462 ~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~-----------~~~~~~~~-h~~~V~~v~~sp~g~~l~sgs~Dg~i~lw 529 (711)
.+..++++.-..+.+.-+.||.|..|-.... .....+.. ....|..|+.. ....+....||.|+.|
T Consensus 106 ~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~w 183 (389)
T 3kci_A 106 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTW 183 (389)
T ss_dssp CEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEE
T ss_pred ceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEEe
Confidence 3445566656666677778888888854210 11111111 12356666654 3456666789999999
Q ss_pred ECCCC------------ceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCC-c----------EEEEeeC-C
Q psy14440 530 ATDSY------------HPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTG-S----------HVRLLTG-H 585 (711)
Q Consensus 530 d~~~~------------~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~-~----------~v~~~~~-h 585 (711)
-.... .+...-......|..++......+.++-..||.|..|-.... + ....+.. .
T Consensus 184 G~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~ 263 (389)
T 3kci_A 184 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLT 263 (389)
T ss_dssp ECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGT
T ss_pred CCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccC
Confidence 65421 011111112334666665433356677778999999964321 0 1111221 1
Q ss_pred CCCeEEEEEecCCCEEEEEeCCCcEEEEECCC------C----e-EEEEeeCC-CCCEEEEEEeCCCCEEEEEeCCCcEE
Q psy14440 586 KAPVYALSFSVCGRFLASAGGDGNVHMWDLSN------G----H-LLTLLTGH-TDVVRALCFSRDGNILASSGQDCSVK 653 (711)
Q Consensus 586 ~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~s------g----~-~i~~l~~h-~~~V~sl~fspdg~~Lasgs~Dg~V~ 653 (711)
...|..++.. ..+.++-..||.|+.|-... + . .-..+... ...|..++.. ....+....||.|.
T Consensus 264 ~~~v~~v~~G--~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G--~~h~~al~~~G~v~ 339 (389)
T 3kci_A 264 GLGVVKVECG--SQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG--SLHCVCCTEDGEVY 339 (389)
T ss_dssp TSCEEEEEEE--TTEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEEC--SSEEEEEETTCCEE
T ss_pred CCcEEEEeCC--CCEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEec--cCeEEEECCCCCEE
Confidence 2346666654 33444556889999996432 1 1 11122221 2346666553 34555567899999
Q ss_pred EEeCCC
Q psy14440 654 LWDFAK 659 (711)
Q Consensus 654 iWdl~~ 659 (711)
.|=...
T Consensus 340 ~wG~n~ 345 (389)
T 3kci_A 340 TWGDND 345 (389)
T ss_dssp EEECCT
T ss_pred EeeCCC
Confidence 998765
No 373
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=66.97 E-value=1.1e+02 Score=30.82 Aligned_cols=187 Identities=11% Similarity=0.025 Sum_probs=106.7
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEE---------EEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCC--------
Q psy14440 471 DRSLLLSCSQDNTIRLWSLLLWRCLV---------VYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDS-------- 533 (711)
Q Consensus 471 dg~~L~s~s~Dg~V~iwdl~t~~~~~---------~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~-------- 533 (711)
+...+++.+.+|.|+--.+...+... .++. ...+..+........++..+..|.++-+....
T Consensus 2 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke-~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a 80 (307)
T 1zi0_A 2 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKE-EDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGA 80 (307)
T ss_dssp CCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSS
T ss_pred CCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCC
Confidence 45578888999999887775543221 1222 23344444444556777788888877665421
Q ss_pred -CceeEEe-e-cCCCCeeEEEEc---CCCCEEEEEEcCCcEEEEECCC-------CcEEEEeeCCCCCeEEEEEecCCCE
Q psy14440 534 -YHPLRLF-V-GHYSDVDCVQFH---PNSNYVATGSSDRTIRLWDCVT-------GSHVRLLTGHKAPVYALSFSVCGRF 600 (711)
Q Consensus 534 -~~~~~~~-~-~h~~~V~~v~~s---p~~~~latgs~Dg~I~iwD~~~-------~~~v~~~~~h~~~I~~la~spdg~~ 600 (711)
|.++..+ . .....|.++..- .++.+++..+.+|.++-..+.. |.....+..+ +.+..+....+...
T Consensus 81 ~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~ 159 (307)
T 1zi0_A 81 RGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDE 159 (307)
T ss_dssp CCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCE
T ss_pred CCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCE
Confidence 2222111 1 123345555432 3566899999999999887642 2111122233 45555555555567
Q ss_pred EEEEeCCCcEEEEECCC---------CeEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q psy14440 601 LASAGGDGNVHMWDLSN---------GHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKL 660 (711)
Q Consensus 601 Lasgs~Dg~I~iwDl~s---------g~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~ 660 (711)
|+..+.+|.+..++... |...-.+. ....|.++....++..|++.+..|.++-.++...
T Consensus 160 i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~ 227 (307)
T 1zi0_A 160 VMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLG-EGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEY 227 (307)
T ss_dssp EEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEECCCSSCEEEEEETTSEEEEECGGGS
T ss_pred EEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeC-CCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHh
Confidence 77888889888887532 22211222 2345666665555667888899999999887654
No 374
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=63.62 E-value=65 Score=39.12 Aligned_cols=38 Identities=16% Similarity=0.189 Sum_probs=32.4
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEEEECCCCeEEEEee
Q psy14440 588 PVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLT 625 (711)
Q Consensus 588 ~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg~~i~~l~ 625 (711)
.+.+++...+..++++-+.|++++||++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 44556677788999999999999999999999988754
No 375
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=62.98 E-value=1.3e+02 Score=30.26 Aligned_cols=191 Identities=11% Similarity=0.046 Sum_probs=106.7
Q ss_pred EcCCCCEEEEEeCCCeEEEEEC---C------CCeEEE---EEecCCCCEEEEEEc---CCCCEEEEEECCCeEEEEECC
Q psy14440 468 FSPDRSLLLSCSQDNTIRLWSL---L------LWRCLV---VYKGHGHPVWDIKFS---PHGYYFASAGHDRMARLWATD 532 (711)
Q Consensus 468 fspdg~~L~s~s~Dg~V~iwdl---~------t~~~~~---~~~~h~~~V~~v~~s---p~g~~l~sgs~Dg~i~lwd~~ 532 (711)
.......|+..+..|.++-+.. . .|..+. .+. ....|.++... .++.+++.++.+|.++...+.
T Consensus 49 ~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~ 127 (307)
T 1zi0_A 49 VANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLT 127 (307)
T ss_dssp EEETTCEEEEEETTSEEEEEEGGGSCCCCSSSCCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGG
T ss_pred EECCCCEEEEEECCCEEEEEEhhHCcCCCCCCCCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHH
Confidence 3334456666667776555543 1 122111 122 23345555332 345689999999999999764
Q ss_pred CCc-----eeE--EeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCC-------CcEEEEee-CCCCCeEEEEEecC
Q psy14440 533 SYH-----PLR--LFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT-------GSHVRLLT-GHKAPVYALSFSVC 597 (711)
Q Consensus 533 ~~~-----~~~--~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~-------~~~v~~~~-~h~~~I~~la~spd 597 (711)
... -+. .+..+ ..+..+....+...++..+.+|.+..++... ..-++.+. .....|.++....+
T Consensus 128 e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~ 206 (307)
T 1zi0_A 128 EFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRG 206 (307)
T ss_dssp GGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCS
T ss_pred HhhccccCCeEEEEECCC-CEEEEEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecC
Confidence 221 111 12223 4455555544556788888899888887632 11222222 12345666655555
Q ss_pred CCEEEEEeCCCcEEEEECCC-------C--eEEEEeeCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Q psy14440 598 GRFLASAGGDGNVHMWDLSN-------G--HLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKL 660 (711)
Q Consensus 598 g~~Lasgs~Dg~I~iwDl~s-------g--~~i~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~~ 660 (711)
+..|++.+..|.++-.++.. + .....+..-.+.+-.+....+...|+..+.+|.+.-+++...
T Consensus 207 ~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~i 278 (307)
T 1zi0_A 207 DGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEI 278 (307)
T ss_dssp SCEEEEEETTSEEEEECGGGSCCCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGGS
T ss_pred CCEEEEEEcCCceEEEEHHHhccCCCCCCCEEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEecccc
Confidence 66788889999998887632 1 112222222355555554444555666777888777776653
No 376
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=61.15 E-value=22 Score=43.25 Aligned_cols=38 Identities=18% Similarity=0.192 Sum_probs=32.5
Q ss_pred CeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEee
Q psy14440 546 DVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLT 583 (711)
Q Consensus 546 ~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~ 583 (711)
.+.+++...+..++++-+.|+++||||+.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 45566677788999999999999999999999988754
No 377
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=60.26 E-value=1.6e+02 Score=30.44 Aligned_cols=184 Identities=10% Similarity=0.052 Sum_probs=99.3
Q ss_pred CCEEEEEeCCCeEEEEECCCC--------e---EEEEEec-CCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCc----
Q psy14440 472 RSLLLSCSQDNTIRLWSLLLW--------R---CLVVYKG-HGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYH---- 535 (711)
Q Consensus 472 g~~L~s~s~Dg~V~iwdl~t~--------~---~~~~~~~-h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~---- 535 (711)
..+.+.-..||.|..|-.... . ....+.. ....+..++.+......+..+.||.|+.|-....-
T Consensus 62 ~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~ 141 (389)
T 3kci_A 62 EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 141 (389)
T ss_dssp TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCS
T ss_pred CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCC
Confidence 344555567788888854211 1 1111111 23345556666666677777889999999654210
Q ss_pred -------eeEEeec-CCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCC-c----------EEEEeeC-CCCCeEEEEEe
Q psy14440 536 -------PLRLFVG-HYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTG-S----------HVRLLTG-HKAPVYALSFS 595 (711)
Q Consensus 536 -------~~~~~~~-h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~-~----------~v~~~~~-h~~~I~~la~s 595 (711)
....+.. ....|..|+.. ..+.++-..||.|+.|-.... + ....+.. ....|..++..
T Consensus 142 g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G 219 (389)
T 3kci_A 142 GNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 219 (389)
T ss_dssp SSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC
T ss_pred CCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEc
Confidence 0111111 12245555543 456666778999999965321 0 1111111 23457777765
Q ss_pred cCCCEEEEEeCCCcEEEEECCC-C---------e-EEEEeeCC-CCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 596 VCGRFLASAGGDGNVHMWDLSN-G---------H-LLTLLTGH-TDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 596 pdg~~Lasgs~Dg~I~iwDl~s-g---------~-~i~~l~~h-~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
....+.+.-..||.|+.|-... | . .-..+... ...|..++.. ..+.+.-..||.|..|=...
T Consensus 220 ~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G--~~hs~alt~~G~v~~wG~n~ 293 (389)
T 3kci_A 220 SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG--SQFSVALTKSGAVYTWGKGD 293 (389)
T ss_dssp CSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEE--TTEEEEEETTSCEEEEECCG
T ss_pred CCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCC--CCEEEEEeCCCeEEEEeCCC
Confidence 4335566667889999996432 1 1 11122221 2246666654 34455557899999997654
No 378
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=59.29 E-value=1.7e+02 Score=30.39 Aligned_cols=191 Identities=11% Similarity=0.028 Sum_probs=110.2
Q ss_pred cCCCCEEEEEeCCCeEEEEECCC---------CeEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCC------
Q psy14440 469 SPDRSLLLSCSQDNTIRLWSLLL---------WRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDS------ 533 (711)
Q Consensus 469 spdg~~L~s~s~Dg~V~iwdl~t---------~~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~------ 533 (711)
-++..++++.+.+|.|+--.+.. +.....++ ....+..+........++..+..|.++.+....
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r 82 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGS 82 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCT
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCc
Confidence 35777899999999998876532 12223333 345565666555666788888888887665421
Q ss_pred ---CceeEEe-e-cCCCCeeEEEEcC---CCCEEEEEEcCCcEEEEECCC-------CcEEEEeeCCCCCeEEEEEecCC
Q psy14440 534 ---YHPLRLF-V-GHYSDVDCVQFHP---NSNYVATGSSDRTIRLWDCVT-------GSHVRLLTGHKAPVYALSFSVCG 598 (711)
Q Consensus 534 ---~~~~~~~-~-~h~~~V~~v~~sp---~~~~latgs~Dg~I~iwD~~~-------~~~v~~~~~h~~~I~~la~spdg 598 (711)
|.++..+ . .....|.++.... ++.+|+.++..|.++...+.. |.....+.. ...+..+......
T Consensus 83 ~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~ 161 (370)
T 3l6v_A 83 NARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGD 161 (370)
T ss_dssp TSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSC
T ss_pred ccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCC
Confidence 2222111 1 1234455544332 456999999999999887532 211112222 3445555555555
Q ss_pred CEEEEEeCCCcEEEEECCC----C---eEEEEeeC-CCCCEEEEEEeC--------------------------------
Q psy14440 599 RFLASAGGDGNVHMWDLSN----G---HLLTLLTG-HTDVVRALCFSR-------------------------------- 638 (711)
Q Consensus 599 ~~Lasgs~Dg~I~iwDl~s----g---~~i~~l~~-h~~~V~sl~fsp-------------------------------- 638 (711)
..|+..+.+|.+..|+... | +=++.++- ....|.++....
T Consensus 162 ~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~~ 241 (370)
T 3l6v_A 162 RDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDVA 241 (370)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC------------------------------
T ss_pred ceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEeccccccccccccccccccccccccccccccccc
Confidence 6777788888888886532 1 11121111 123455554443
Q ss_pred ---CCCEEEEEeCCCcEEEEeCCCCC
Q psy14440 639 ---DGNILASSGQDCSVKLWDFAKLS 661 (711)
Q Consensus 639 ---dg~~Lasgs~Dg~V~iWdl~~~~ 661 (711)
++..|++.+..|..+...+..+.
T Consensus 242 ~~~~~~~il~vTe~G~gKrt~~~e~~ 267 (370)
T 3l6v_A 242 DNGDVAYILTATENGYGKRTPLAEYP 267 (370)
T ss_dssp -----CEEEEEETTSEEEEEEGGGSC
T ss_pred cccCCceEEEeeCCCCEEEEEHHHhc
Confidence 44578888999998888876543
No 379
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=59.27 E-value=1.6e+02 Score=29.97 Aligned_cols=144 Identities=7% Similarity=0.036 Sum_probs=80.3
Q ss_pred CCEEEEEeCCCeEEEEECCCC--------eEEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCCCc-------e
Q psy14440 472 RSLLLSCSQDNTIRLWSLLLW--------RCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYH-------P 536 (711)
Q Consensus 472 g~~L~s~s~Dg~V~iwdl~t~--------~~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~~~-------~ 536 (711)
+.+|+.++.+|.++...+... .....++. ...+..+........++..+.+|.+..+....-. -
T Consensus 106 ~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~G 184 (323)
T 1wp5_A 106 NGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAG 184 (323)
T ss_dssp SCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCC
T ss_pred CceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcC
Confidence 568999999999999987422 21122332 2455555555556678888899999888765321 1
Q ss_pred eEEeec-CCCCeeEEEEcCCCC-EEEEEEcCCcEEEEECCC-------CcEEEEee---CCCCCeEEEEEecCCCEEEEE
Q psy14440 537 LRLFVG-HYSDVDCVQFHPNSN-YVATGSSDRTIRLWDCVT-------GSHVRLLT---GHKAPVYALSFSVCGRFLASA 604 (711)
Q Consensus 537 ~~~~~~-h~~~V~~v~~sp~~~-~latgs~Dg~I~iwD~~~-------~~~v~~~~---~h~~~I~~la~spdg~~Lasg 604 (711)
++.+.- ....|.++....++. .|++.+..|..+..++.. ++-+..+. .....+..+....++..++..
T Consensus 185 V~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kGv~~~~~~~~~~~~l~~~~~v~~~~~i~~i 264 (323)
T 1wp5_A 185 VKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVILRELKANPHRISGFVVAQDSDTIYLQ 264 (323)
T ss_dssp EECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECSCCCSSSCCCEEEEEEECTTCEEEEE
T ss_pred EEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCCCCEECeeecCCCCceEEEEEEeCCCCeEEEE
Confidence 222221 223455554444445 788888888887776643 22222222 112234433222333445555
Q ss_pred eCCCcEEEEECC
Q psy14440 605 GGDGNVHMWDLS 616 (711)
Q Consensus 605 s~Dg~I~iwDl~ 616 (711)
+..|.+..+.+.
T Consensus 265 t~~g~~ir~~~~ 276 (323)
T 1wp5_A 265 TEKSFIETIKVG 276 (323)
T ss_dssp ETTSCEEEEEGG
T ss_pred eCCCeEEEEEhh
Confidence 566666555543
No 380
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=56.67 E-value=1.9e+02 Score=30.06 Aligned_cols=240 Identities=10% Similarity=0.009 Sum_probs=125.8
Q ss_pred ECCCCCEEEEEeCCCeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCCeeEEEeecccCCEEEEEEcCCCCE
Q psy14440 395 ISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSL 474 (711)
Q Consensus 395 fs~dg~~LatG~~dg~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~l~~h~~~V~~l~fspdg~~ 474 (711)
+-++..++++.+.+|+|+--.+..-+.. ..+ ..+.....+. ....+..+........
T Consensus 3 lI~~e~~~v~lT~~GyIKr~~l~~y~~~--~r~--------------------g~g~~~~~lk-e~D~l~~~~~~~t~d~ 59 (370)
T 3l6v_A 3 LIAPEDVVVTLSHAGYAKRQPVSAYRAQ--RRG--------------------GRGRSAASTK-EEDFIDQLWLVNTHDT 59 (370)
T ss_dssp CCCCCCEEEEEESSCEEEEEEHHHHHHT--CCC--------------------CCCSEEEECS-CCCCEEEEEEECTTCE
T ss_pred cccCCCEEEEEeCCCEEEEeeHHHhhhh--ccC--------------------CCCceecccC-CCCEEEEEEEecCCCE
Confidence 3467778999999999986554211000 000 0011111222 2234444444445556
Q ss_pred EEEEeCCCeEEEEEC---C------CCeEEE---EEecCCCCEEEEEEcC---CCCEEEEEECCCeEEEEECCCCce---
Q psy14440 475 LLSCSQDNTIRLWSL---L------LWRCLV---VYKGHGHPVWDIKFSP---HGYYFASAGHDRMARLWATDSYHP--- 536 (711)
Q Consensus 475 L~s~s~Dg~V~iwdl---~------t~~~~~---~~~~h~~~V~~v~~sp---~g~~l~sgs~Dg~i~lwd~~~~~~--- 536 (711)
|+..+..|.+.-+.. . .|..+. .+. ....|.++.... .+.+++.++..|.++...+.....
T Consensus 60 ll~fT~~G~~~~~~~~eip~~~r~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~ 138 (370)
T 3l6v_A 60 LLTFTSSGKVFWLPVHQLPEAGSNARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLA 138 (370)
T ss_dssp EEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCT
T ss_pred EEEEeCCCeEEEEEHHHCcCCCcccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccC
Confidence 666667776655443 1 122111 122 234455444322 456999999999999987643221
Q ss_pred --eE--EeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCC-------cEEEEeeC-CCCCeEEEEEec--------
Q psy14440 537 --LR--LFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTG-------SHVRLLTG-HKAPVYALSFSV-------- 596 (711)
Q Consensus 537 --~~--~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~-------~~v~~~~~-h~~~I~~la~sp-------- 596 (711)
+. .+.. ...+..+........|+..+.+|.+..|+...- +-++.+.- ....|.++....
T Consensus 139 ~G~~ai~L~~-~d~lv~v~~~~~~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~ 217 (370)
T 3l6v_A 139 RGKIAINLDE-GDALVGVALTDGDRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDE 217 (370)
T ss_dssp TCEESSCCCT-TCCEEEEEEECSCCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC------
T ss_pred CceEEEEeCC-CCEEEEEEEeCCCceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEeccccccccc
Confidence 11 1222 334444544445567888888888877765321 11222221 234455554443
Q ss_pred ---------------------------CCCEEEEEeCCCcEEEEECCC-------CeEEEEe--eCCCCCEEEEEEeCCC
Q psy14440 597 ---------------------------CGRFLASAGGDGNVHMWDLSN-------GHLLTLL--TGHTDVVRALCFSRDG 640 (711)
Q Consensus 597 ---------------------------dg~~Lasgs~Dg~I~iwDl~s-------g~~i~~l--~~h~~~V~sl~fspdg 640 (711)
++.+|++.+..|..+...+.. ++=+..+ ....+.+..+.+..++
T Consensus 218 ~~~~~~~~~~~t~~g~~~~~~~~~~~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~~~~g~lv~~~~v~~~ 297 (370)
T 3l6v_A 218 VEDESAEEVVETTDGAEPAVIDVADNGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGST 297 (370)
T ss_dssp -----------------------------CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCCTTTCSEEEEEEECTT
T ss_pred cccccccccccccccccccccccccccCCceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEecCCCCcEEEEEEeCCC
Confidence 456888899999888887642 2222222 2223456555555555
Q ss_pred CEEEEEeCCCcEEEEeCCC
Q psy14440 641 NILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 641 ~~Lasgs~Dg~V~iWdl~~ 659 (711)
..++..+..|.+.-..+..
T Consensus 298 d~i~liT~~G~~iR~~v~~ 316 (370)
T 3l6v_A 298 DEVMLISDGGTLVRTRGSE 316 (370)
T ss_dssp CEEEEEETTCCEEEEEGGG
T ss_pred ceEEEEcCCCeEEEeeHhh
Confidence 5666667777766666544
No 381
>1pk8_A RAT synapsin I; ATP binding, ATP grAsp, calcium (II) ION, membrane protein; HET: ATP; 2.10A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1px2_A*
Probab=53.37 E-value=2.8 Score=44.81 Aligned_cols=14 Identities=21% Similarity=0.468 Sum_probs=5.4
Q ss_pred EEecCCCceEEEEE
Q psy14440 382 TLLNARQQVTCAEI 395 (711)
Q Consensus 382 tl~~h~~~V~~l~f 395 (711)
.+......|.+..+
T Consensus 307 EfI~~g~DIRv~VV 320 (422)
T 1pk8_A 307 PFIDAKYDVRVQKI 320 (422)
T ss_dssp ECCCEEEEEEEEEE
T ss_pred eecCCCceEEEEEE
Confidence 33333334444433
No 382
>1iap_A Guanine nucleotide exchange factor P115rhogef; RGS, RGRGS, signaling protein; 1.90A {Homo sapiens} SCOP: a.91.1.1
Probab=50.06 E-value=7.1 Score=36.96 Aligned_cols=40 Identities=10% Similarity=0.142 Sum_probs=32.7
Q ss_pred HHHHHhhhcccchhhhhhhhHHHHHHHHHHHHhCCChHHHHHHHHHhcC
Q psy14440 152 LKKFIENSLDVYKYELGLVLYPVLVHMYIELVYNGHEHQATEMLHKHLM 200 (711)
Q Consensus 152 l~~~v~~~ld~~k~el~~~l~p~f~~~yl~lv~~~~~~~a~~f~~~~~~ 200 (711)
|-++|-+..|. -|||+|+|-||.+.+..+++|.++-.|..
T Consensus 21 FL~yV~sq~DP---------spLLfYL~tdlYk~~~~Ke~rk~~~Ei~s 60 (211)
T 1iap_A 21 LLQHVALQFEP---------GPLLCCLHADMLGSLGPKEAKKAFLDFYH 60 (211)
T ss_dssp HHHHHHHHSCS---------HHHHHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCc---------hhhHHHHHHHHHhccChHHHHHHHHHHHH
Confidence 45666666664 49999999999999999999998877653
No 383
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=49.66 E-value=2.4e+02 Score=29.30 Aligned_cols=189 Identities=9% Similarity=-0.035 Sum_probs=98.2
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEEC--CC-Ce---------EEEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEE
Q psy14440 462 PVRKLSFSPDRSLLLSCSQDNTIRLWSL--LL-WR---------CLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLW 529 (711)
Q Consensus 462 ~V~~l~fspdg~~L~s~s~Dg~V~iwdl--~t-~~---------~~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lw 529 (711)
.|..++.. ..+.+.-..||.|..|-. .. ++ ...........|..|+.. ..+.+.-+.||.|+.|
T Consensus 128 ~i~~va~G--~~hs~al~~~G~v~~wG~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G--~~hs~alt~~G~v~~w 203 (423)
T 3mvd_K 128 KALCISAG--DSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASG--ADHLVILTTAGKVFTV 203 (423)
T ss_dssp CEEEEEEC--SSEEEEEETTSCEEEEECEECSSSEEESBTTBCEEEEEESSTTCCEEEEEEC--SSEEEEEETTSCEEEE
T ss_pred CEEEEEcC--cCeEEEEeCCCeEEEEeCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEecC--CCeEEEEecCCeEEEe
Confidence 45555543 334455567788888864 21 11 111111223456666654 3456666789999999
Q ss_pred ECCCC-----------------------ceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCC----------
Q psy14440 530 ATDSY-----------------------HPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTG---------- 576 (711)
Q Consensus 530 d~~~~-----------------------~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~---------- 576 (711)
-.... .+..........|..|+.. ....++.-+.+|.|..|-....
T Consensus 204 G~n~~GqLG~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~v~~i~~g-~~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~ 282 (423)
T 3mvd_K 204 GCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWAT-NYCTFMRESQTQVIWATGLNNFKQLAHETKGK 282 (423)
T ss_dssp ECCTTSTTSSCCTTTTTSCSTTTTTTTSSCEEECCTTCCCEEEEEEE-TTEEEEEETTTCCEEEEEECTTCTTSSCCTTC
T ss_pred eCCcCCccCCCcccccccccccccccccCCeEEeecCCccEEEEEEC-CcEEEEEECCCCeEEEEeCCCCCcCCCCCCCC
Confidence 64321 1222222223345555543 2222333357888988864321
Q ss_pred -cEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC------C------eEEEEeeCCCCCEEEEEEeCCCCEE
Q psy14440 577 -SHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN------G------HLLTLLTGHTDVVRALCFSRDGNIL 643 (711)
Q Consensus 577 -~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~s------g------~~i~~l~~h~~~V~sl~fspdg~~L 643 (711)
....-.......|..|+.. ..+.+.-..||.|+.|=... + .....+......|..|+... ...
T Consensus 283 ~~~~~p~~~~~~~v~~ia~G--~~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia~G~--~hs 358 (423)
T 3mvd_K 283 EFALTPIKTELKDIRHIAGG--QHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGE--VCS 358 (423)
T ss_dssp SEEEEEEEECCCSEEEEEEC--SSEEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEEEEEET--TEE
T ss_pred ceeeeeEEcCCCCeEEEEcc--cCeEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCCCEEEEEcCC--CeE
Confidence 1111111113456666553 34455556789999996422 1 11222333333677777653 344
Q ss_pred EEEeCCCcEEEEeCCC
Q psy14440 644 ASSGQDCSVKLWDFAK 659 (711)
Q Consensus 644 asgs~Dg~V~iWdl~~ 659 (711)
+.-..||.|..|=...
T Consensus 359 ~alt~~G~v~~wG~n~ 374 (423)
T 3mvd_K 359 YAVTIDGKLYSWGSGV 374 (423)
T ss_dssp EEEETTSCEEEEECCT
T ss_pred EEEcCCCCEEEECCCC
Confidence 4457899999997654
No 384
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=48.89 E-value=57 Score=36.47 Aligned_cols=59 Identities=24% Similarity=0.345 Sum_probs=44.3
Q ss_pred CeEEEEEecCCCEEEEEeCC------------CcEEEEECCCCeEEEEeeCCC-CCEEEEEEeCCCCEEEEE
Q psy14440 588 PVYALSFSVCGRFLASAGGD------------GNVHMWDLSNGHLLTLLTGHT-DVVRALCFSRDGNILASS 646 (711)
Q Consensus 588 ~I~~la~spdg~~Lasgs~D------------g~I~iwDl~sg~~i~~l~~h~-~~V~sl~fspdg~~Lasg 646 (711)
..-.|+|++.|++++.-+.+ +.+.+.+..+|+....+.++. ..++.++|+||++.|++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 45679999999976655432 245666777888877777664 689999999999887765
No 385
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=46.88 E-value=3.8e+02 Score=30.74 Aligned_cols=146 Identities=12% Similarity=0.069 Sum_probs=77.1
Q ss_pred cCCEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCeEEEEEecC-------CCCEEEEEEcCCC-CEEEEEECCC-----e
Q psy14440 460 EGPVRKLSFSPD-RSLLLSCSQDNTIRLWSLLLWRCLVVYKGH-------GHPVWDIKFSPHG-YYFASAGHDR-----M 525 (711)
Q Consensus 460 ~~~V~~l~fspd-g~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h-------~~~V~~v~~sp~g-~~l~sgs~Dg-----~ 525 (711)
.+.|.+|+++|. ...+++++..+.|...+= .++.-..+..+ ...|.+|++.|.. ..++.+..+. .
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~D-gG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDA-GTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEET-TTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecC-CCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 468999999985 456777777776665542 23222222221 2469999998843 3444443221 2
Q ss_pred EEEEECCCCceeEEeecC---------CCCeeEEEEcCC-CCEEEEEEcCCcEEEEECCCCcEEEEeeC------CCCCe
Q psy14440 526 ARLWATDSYHPLRLFVGH---------YSDVDCVQFHPN-SNYVATGSSDRTIRLWDCVTGSHVRLLTG------HKAPV 589 (711)
Q Consensus 526 i~lwd~~~~~~~~~~~~h---------~~~V~~v~~sp~-~~~latgs~Dg~I~iwD~~~~~~v~~~~~------h~~~I 589 (711)
..+...+.++.-..+... ...+.+++++|. .+.++.+...+.|. .....|+.-..+.. ....+
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~-~S~DgG~TW~~~~~~~~~~~~~~~~ 171 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIW-KSSDRAKTWTNVTSIPDAFTNGIGY 171 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEE-EESSTTSSCEEETTSCCCCSTTTCE
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEE-EECCCCcccCCCccCccccCCCCCe
Confidence 233345555443333210 113567888874 45666665344332 22233433333321 12457
Q ss_pred EEEEEecC-CCEEEEEeCC
Q psy14440 590 YALSFSVC-GRFLASAGGD 607 (711)
Q Consensus 590 ~~la~spd-g~~Lasgs~D 607 (711)
..+.++|. +..|+++..+
T Consensus 172 ~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 172 TSVIFDPERNGTIYASATA 190 (789)
T ss_dssp EEEEECTTSTTCEEEEESS
T ss_pred EEEEECCCCCCEEEEEEcC
Confidence 88999874 4456666554
No 386
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=46.81 E-value=67 Score=35.66 Aligned_cols=61 Identities=21% Similarity=0.292 Sum_probs=45.0
Q ss_pred CCeEEEEEecCCCEEEEEeC------------CCcEEEEECCCCeEEEEeeCC-CCCEEEEEEeCCCCEEEEEe
Q psy14440 587 APVYALSFSVCGRFLASAGG------------DGNVHMWDLSNGHLLTLLTGH-TDVVRALCFSRDGNILASSG 647 (711)
Q Consensus 587 ~~I~~la~spdg~~Lasgs~------------Dg~I~iwDl~sg~~i~~l~~h-~~~V~sl~fspdg~~Lasgs 647 (711)
.....|+|+++|.+.++.+. .+.|..++..+|+....+.+. ...++.++|+||++.|+++-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 35678999999987774432 126777788788877666654 35789999999999877764
No 387
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=45.83 E-value=3e+02 Score=29.25 Aligned_cols=147 Identities=12% Similarity=0.067 Sum_probs=78.1
Q ss_pred CCEEEEEEcCCCCEEEEEECCCeEEEEECC---CCc-------------eeEEeecCCCCeeEEEEcCCCCEEEEEEcCC
Q psy14440 503 HPVWDIKFSPHGYYFASAGHDRMARLWATD---SYH-------------PLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566 (711)
Q Consensus 503 ~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~---~~~-------------~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg 566 (711)
..|..|+.. ....+..+.||.|+.|-.. .++ +...-......|..|+.. ..+.++-+.+|
T Consensus 148 ~~i~~va~G--~~hs~alt~~G~vy~wG~n~~~~GqLG~~~~~~~~~~~P~~v~~l~~~~i~~va~G--~~hs~alt~~G 223 (473)
T 3of7_A 148 HKVVQLAAT--DNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPG--KDHILFLDEEG 223 (473)
T ss_dssp CCEEEEEEC--SSEEEEEETTSCEEEEECEEETTEEEESBTTTBSCEEEEEECCCCCSSCEEEEEEC--SSEEEEEETTS
T ss_pred CcEEEEEcc--CCEEEEEeCCCeEEEeeCCcCCCCccCCCCCCCccccCcEEccccCCCCEEEEEec--CCeEEEEeCCC
Confidence 456666654 3455666788999999751 110 111100111236666653 45666677899
Q ss_pred cEEEEECCCCcE---------------EEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC-C-----------e
Q psy14440 567 TIRLWDCVTGSH---------------VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN-G-----------H 619 (711)
Q Consensus 567 ~I~iwD~~~~~~---------------v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~s-g-----------~ 619 (711)
.|..|-....-. ...+ ....|..|+.. ....++-..+|.|+.|-... | .
T Consensus 224 ~v~~wG~n~~GqLG~~~~~~~~~~~~~p~~~--~~~~v~~Ia~G--~~hs~alt~~G~v~~wG~n~~GqlG~~~~~~~~~ 299 (473)
T 3of7_A 224 MVFAWGNGQQNQLGRKVMERFRLKTLDPRPF--GLRHVKYIASG--ENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGA 299 (473)
T ss_dssp CEEEEECCTTSTTSSCCCGGGTTTTCSCEEC--SCCSEEEEEEC--SSEEEEEETTSCEEEEEECTTSTTCCCSCCCTTC
T ss_pred eEEEEeCCCCCCCCCCccccccccccCceec--CCcceEEEecC--CCeEEEEecCCCEEEeCCCCCCCcCCCCcccCCc
Confidence 999996543111 0111 11356666653 34455556788999995432 1 1
Q ss_pred EE---EEeeCC-CCCEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 620 LL---TLLTGH-TDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 620 ~i---~~l~~h-~~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
.+ ..+... ...|..++.. ....+.-..||.|..|=-..
T Consensus 300 ~~~~P~~v~~~~~~~i~~ia~G--~~hs~~lt~~G~v~~wG~n~ 341 (473)
T 3of7_A 300 LVTKPKRLALPDNVVIRSIAAG--EHHSLILSQDGDLYSCGRLD 341 (473)
T ss_dssp EEEEEEECCCCTTCCEEEEEEC--SSEEEEEETTSCEEEEEECT
T ss_pred eeeccccccccCCccEEEEEeC--CCeEEEEeCCCeEEEEECCC
Confidence 11 111111 2356666654 34444557789999997654
No 388
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=44.02 E-value=1.5e+02 Score=33.91 Aligned_cols=38 Identities=16% Similarity=0.347 Sum_probs=31.5
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEEec
Q psy14440 461 GPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKG 500 (711)
Q Consensus 461 ~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~~~~~~~~ 500 (711)
..|.++.+ +..+|++-+.|+++|+||+.+++++.+..-
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 34666655 477999999999999999999999888764
No 389
>1oqy_A HHR23A, UV excision repair protein RAD23 homolog A; DNA repair, proteasome-mediated degradation, protein- protein interaction, replication; NMR {Homo sapiens} SCOP: a.5.2.1 a.5.2.1 a.189.1.1 d.15.1.1 PDB: 1qze_A 1tp4_A
Probab=43.86 E-value=1.4e+02 Score=31.00 Aligned_cols=25 Identities=20% Similarity=0.215 Sum_probs=17.1
Q ss_pred HHHHHHHHhhCCCchhH--HHHHhhhc
Q psy14440 92 LITMLKLLRQYNLRGTE--EQLKKEIN 116 (711)
Q Consensus 92 ~~~v~~yl~k~g~~~~e--~~l~~e~~ 116 (711)
....++-|.--||.+.. ++||+-.+
T Consensus 168 ~~~~i~~l~~MGf~~~~~~~AL~a~~n 194 (368)
T 1oqy_A 168 YETMLTEIMSMGYERERVVAALRASYN 194 (368)
T ss_dssp HHHHHHHHHTTTCCSHHHHHHHHHSCS
T ss_pred hHHHHHHHHHcCCCHHHHHHHHHHcCC
Confidence 44667888899998755 55665543
No 390
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=43.36 E-value=69 Score=35.78 Aligned_cols=60 Identities=22% Similarity=0.214 Sum_probs=44.2
Q ss_pred CCeeEEEEcCCCCEEEEEEcC------------CcEEEEECCCCcEEEEeeCC-CCCeEEEEEecCCCEEEEE
Q psy14440 545 SDVDCVQFHPNSNYVATGSSD------------RTIRLWDCVTGSHVRLLTGH-KAPVYALSFSVCGRFLASA 604 (711)
Q Consensus 545 ~~V~~v~~sp~~~~latgs~D------------g~I~iwD~~~~~~v~~~~~h-~~~I~~la~spdg~~Lasg 604 (711)
.....|+|++.|+++++-..+ ..+.+.+..+++..+.+.++ .+.++.++|+||++.|++.
T Consensus 476 ~~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cCCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 345789999999865553322 23566677788887777765 4679999999999988776
No 391
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=41.60 E-value=33 Score=39.24 Aligned_cols=37 Identities=14% Similarity=0.380 Sum_probs=30.7
Q ss_pred CeeEEEEcCCCCEEEEEEcCCcEEEEECCCCcEEEEeeC
Q psy14440 546 DVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTG 584 (711)
Q Consensus 546 ~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~~~v~~~~~ 584 (711)
.|.|+.+ +..++++-+.|+++|+||+.+++++....-
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4666665 378999999999999999999999887653
No 392
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=41.46 E-value=81 Score=35.03 Aligned_cols=61 Identities=20% Similarity=0.172 Sum_probs=44.7
Q ss_pred CCeeEEEEcCCCCEEEEEEc------------CCcEEEEECCCCcEEEEeeCC-CCCeEEEEEecCCCEEEEEe
Q psy14440 545 SDVDCVQFHPNSNYVATGSS------------DRTIRLWDCVTGSHVRLLTGH-KAPVYALSFSVCGRFLASAG 605 (711)
Q Consensus 545 ~~V~~v~~sp~~~~latgs~------------Dg~I~iwD~~~~~~v~~~~~h-~~~I~~la~spdg~~Lasgs 605 (711)
.....|.|+++|.+.++... ...|..++..+|+..+.+.+. ...++.++|+||++.|+++-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 45678999999987763321 125677777788877666654 46789999999999988763
No 393
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=39.69 E-value=1.7e+02 Score=24.52 Aligned_cols=60 Identities=10% Similarity=0.035 Sum_probs=26.6
Q ss_pred CCEEEEEEcCCcEEEEECCCCcEEEEeeCC-CCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy14440 556 SNYVATGSSDRTIRLWDCVTGSHVRLLTGH-KAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617 (711)
Q Consensus 556 ~~~latgs~Dg~I~iwD~~~~~~v~~~~~h-~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~s 617 (711)
+.+.+.-..||.+.+|+...+..+-.-... .+....+.+..+|++++.. .++.+ +|...+
T Consensus 24 g~~~L~~q~dGNLvL~~~~~~~~vWssnt~~~~~~~~l~l~~dGNLVl~d-~~~~~-iW~S~t 84 (113)
T 3mez_B 24 RDYSLVMRDDCNLVLTKGSKTNIVWESGTSGRGQHCFMRLGHSGELDITD-DRLNT-VFVSNT 84 (113)
T ss_dssp TTEEEEECTTSCEEEEETTTTEEEEECCCTTSCSSCEEEECTTSCEEEEC-TTSCE-EEECSC
T ss_pred CCEEEEEcCCCEEEEEECCCCEEEEECCcccCCcCEEEEEeCCCcEEEEC-CCCCE-EEECCC
Confidence 344444444555555553222222221111 1122346666777766653 23443 676443
No 394
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=38.64 E-value=1.8e+02 Score=28.35 Aligned_cols=141 Identities=13% Similarity=0.000 Sum_probs=74.0
Q ss_pred EEEEEeCCCeEEEEECCCCeE-EEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEEEECCC-------CceeEEe-e-cC
Q psy14440 474 LLLSCSQDNTIRLWSLLLWRC-LVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDS-------YHPLRLF-V-GH 543 (711)
Q Consensus 474 ~L~s~s~Dg~V~iwdl~t~~~-~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~lwd~~~-------~~~~~~~-~-~h 543 (711)
.+++.+.+|.|+--....... ...++. ...+..+........++..+..|.++-+.... +.++..+ . ..
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lke-~D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~~ 82 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYKA-GDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPP 82 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCCT-TCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCCT
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCCC-CCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCCC
Confidence 344556666665544332110 001222 22333333333444666667778776664422 2211111 1 12
Q ss_pred CCCeeEEEEcCCCCEEEEEEcCCcEEEEECCC-------CcEEEEeeCCCCCeEEEEEe-cCCCEEEEEeCCCcEEEEEC
Q psy14440 544 YSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT-------GSHVRLLTGHKAPVYALSFS-VCGRFLASAGGDGNVHMWDL 615 (711)
Q Consensus 544 ~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~-------~~~v~~~~~h~~~I~~la~s-pdg~~Lasgs~Dg~I~iwDl 615 (711)
...|.++....++.+|+.++..|.++...+.. |..+..+.. ...+..+... .++..|+..+.+|.+..+..
T Consensus 83 ~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~-~d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~ 161 (256)
T 1zvt_A 83 GATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPE-NAHVMPPVVIEDASDMLLAITQAGRMLMFPV 161 (256)
T ss_dssp TCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCT-TCCBCCCEECCCTTCEEEEEETTSEEEEEEG
T ss_pred CCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECC-CCEEEEEEEecCCCCEEEEEcCCCeEEEEEH
Confidence 34566664434567888999999999887632 222223332 2344444444 34567888889999888876
Q ss_pred C
Q psy14440 616 S 616 (711)
Q Consensus 616 ~ 616 (711)
.
T Consensus 162 ~ 162 (256)
T 1zvt_A 162 S 162 (256)
T ss_dssp G
T ss_pred H
Confidence 4
No 395
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=38.36 E-value=1.4e+02 Score=24.06 Aligned_cols=89 Identities=12% Similarity=0.061 Sum_probs=48.4
Q ss_pred HHHHHHhhCCCchhHHHHHhhhccCCCCCCCCCccccccc-cccccCCChhHHHHHHHHHHHHHhhhcccchhhhhhhhH
Q psy14440 94 TMLKLLRQYNLRGTEEQLKKEINVNDLGIDPNDSEIGDLL-SAYESEGDPNLYEDAYQDLKKFIENSLDVYKYELGLVLY 172 (711)
Q Consensus 94 ~v~~yl~k~g~~~~e~~l~~e~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~v~~~ld~~k~el~~~l~ 172 (711)
....|++.+.|..+...+++=...... +..+-..+ ..+... ..|+++...+++-+....+. . -.+
T Consensus 22 ~~~~~~~~~~~~~A~~~~~~al~~~~~-----~~~~~~~la~~~~~~---~~~~~A~~~~~~a~~~~~~~--~----~~~ 87 (133)
T 2lni_A 22 KGNECFQKGDYPQAMKHYTEAIKRNPK-----DAKLYSNRAACYTKL---LEFQLALKDCEECIQLEPTF--I----KGY 87 (133)
T ss_dssp HHHHHHHTTCSHHHHHHHHHHHTTCTT-----CHHHHHHHHHHHTTT---TCHHHHHHHHHHHHHHCTTC--H----HHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCC-----cHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHhCCCc--h----HHH
Confidence 556688899999999988866544322 11111111 112222 34556655555555533221 1 112
Q ss_pred HHHHHHHHHHHhCCChHHHHHHHHHhc
Q psy14440 173 PVLVHMYIELVYNGHEHQATEMLHKHL 199 (711)
Q Consensus 173 p~f~~~yl~lv~~~~~~~a~~f~~~~~ 199 (711)
=.+..+| ...|..++|..+|++..
T Consensus 88 ~~la~~~---~~~~~~~~A~~~~~~~~ 111 (133)
T 2lni_A 88 TRKAAAL---EAMKDYTKAMDVYQKAL 111 (133)
T ss_dssp HHHHHHH---HHTTCHHHHHHHHHHHH
T ss_pred HHHHHHH---HHHhhHHHHHHHHHHHH
Confidence 2233333 45688999999998753
No 396
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=37.65 E-value=3.4e+02 Score=27.44 Aligned_cols=146 Identities=12% Similarity=0.120 Sum_probs=86.0
Q ss_pred CCEEEEEECCCeEEEEECCCCc------eeEE--eecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCC-------CcE
Q psy14440 514 GYYFASAGHDRMARLWATDSYH------PLRL--FVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT-------GSH 578 (711)
Q Consensus 514 g~~l~sgs~Dg~i~lwd~~~~~------~~~~--~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~-------~~~ 578 (711)
+.+++.++.+|.++...+.... -+.. +.. ...+..+........|+..+.+|.+..++... ++-
T Consensus 106 ~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~G 184 (323)
T 1wp5_A 106 NGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAG 184 (323)
T ss_dssp SCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCC
T ss_pred CceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcC
Confidence 5689999999999999775221 1211 222 24455555544566788888899988887632 122
Q ss_pred EEEeeC-CCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCC-------CeEEEEee---CCCCCEEEEEEeCCCCEEEEE
Q psy14440 579 VRLLTG-HKAPVYALSFSVCGR-FLASAGGDGNVHMWDLSN-------GHLLTLLT---GHTDVVRALCFSRDGNILASS 646 (711)
Q Consensus 579 v~~~~~-h~~~I~~la~spdg~-~Lasgs~Dg~I~iwDl~s-------g~~i~~l~---~h~~~V~sl~fspdg~~Lasg 646 (711)
++.+.- ....|.++..-.++. .|++.+..|..+..++.. ++-+..++ .....+..+....++..++..
T Consensus 185 V~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kGv~~~~~~~~~~~~l~~~~~v~~~~~i~~i 264 (323)
T 1wp5_A 185 VKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVILRELKANPHRISGFVVAQDSDTIYLQ 264 (323)
T ss_dssp EECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECSCCCSSSCCCEEEEEEECTTCEEEEE
T ss_pred EEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCCCCEECeeecCCCCceEEEEEEeCCCCeEEEE
Confidence 333322 234566665544455 788888888888777643 22233232 222245544333445556677
Q ss_pred eCCCcEEEEeCCCC
Q psy14440 647 GQDCSVKLWDFAKL 660 (711)
Q Consensus 647 s~Dg~V~iWdl~~~ 660 (711)
+..|.+.-..+...
T Consensus 265 t~~g~~ir~~~~~i 278 (323)
T 1wp5_A 265 TEKSFIETIKVGDI 278 (323)
T ss_dssp ETTSCEEEEEGGGS
T ss_pred eCCCeEEEEEhhhc
Confidence 77888777776653
No 397
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=35.62 E-value=3.2e+02 Score=26.57 Aligned_cols=143 Identities=13% Similarity=0.039 Sum_probs=78.6
Q ss_pred EEEEEECCCeEEEEECCCCce-eEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECC---C----CcEEEE-ee-CC
Q psy14440 516 YFASAGHDRMARLWATDSYHP-LRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCV---T----GSHVRL-LT-GH 585 (711)
Q Consensus 516 ~l~sgs~Dg~i~lwd~~~~~~-~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~---~----~~~v~~-~~-~h 585 (711)
.+++.+.+|.|+--....... ...+... ..+..+........|+..+..|.++-+.+. . |..+.. +. ..
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lke~-D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~~ 82 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYKAG-DSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPP 82 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCCTT-CCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCCT
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCCCC-CEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCCC
Confidence 455667777776555433110 0012222 233333333344566677778876655432 1 221110 11 12
Q ss_pred CCCeEEEEEecCCCEEEEEeCCCcEEEEECCC-------CeEEEEeeCCCCCEEEEEEe-CCCCEEEEEeCCCcEEEEeC
Q psy14440 586 KAPVYALSFSVCGRFLASAGGDGNVHMWDLSN-------GHLLTLLTGHTDVVRALCFS-RDGNILASSGQDCSVKLWDF 657 (711)
Q Consensus 586 ~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~s-------g~~i~~l~~h~~~V~sl~fs-pdg~~Lasgs~Dg~V~iWdl 657 (711)
...|.++....++.+|+.++..|.++...+.. |..+..++. .+.+-.+... .++..|+..+.+|.+..+++
T Consensus 83 ~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~-~d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~ 161 (256)
T 1zvt_A 83 GATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPE-NAHVMPPVVIEDASDMLLAITQAGRMLMFPV 161 (256)
T ss_dssp TCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCT-TCCBCCCEECCCTTCEEEEEETTSEEEEEEG
T ss_pred CCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECC-CCEEEEEEEecCCCCEEEEEcCCCeEEEEEH
Confidence 34566664434567788899999999987632 344434432 2345444454 34567888899999988988
Q ss_pred CCC
Q psy14440 658 AKL 660 (711)
Q Consensus 658 ~~~ 660 (711)
...
T Consensus 162 ~ei 164 (256)
T 1zvt_A 162 SDL 164 (256)
T ss_dssp GGS
T ss_pred HHC
Confidence 654
No 398
>3ab3_B RHO guanine nucleotide exchange factor 1; signal transduction, protein complex, GTP-binding, membrane, transducer, lipoprotein, nucleotide-binding; HET: GDP; 2.40A {Homo sapiens} PDB: 1shz_C*
Probab=35.52 E-value=5.7 Score=38.39 Aligned_cols=43 Identities=9% Similarity=0.133 Sum_probs=27.4
Q ss_pred HHHHHHhhhcccchhhhhhhhHHHHHHHHHHHHhCCChHHHHHHHHHhcCCC
Q psy14440 151 DLKKFIENSLDVYKYELGLVLYPVLVHMYIELVYNGHEHQATEMLHKHLMDH 202 (711)
Q Consensus 151 ~l~~~v~~~ld~~k~el~~~l~p~f~~~yl~lv~~~~~~~a~~f~~~~~~~~ 202 (711)
-|-++|-+..|- -|||+|+|-||.+.+..+++|+++-.|...|
T Consensus 74 VFL~yV~sq~DP---------spLLfYL~tdlYk~~~~Ke~Rk~a~Ei~stF 116 (246)
T 3ab3_B 74 ALLQHVALQFEP---------GPLLCCLHADMLGSLGPKEAKKAFLDFYHSF 116 (246)
T ss_dssp HHHHHHHHHSCS---------HHHHHHHHHHHHC-------CCTTHHHHHHT
T ss_pred HHHHHHHhcCCc---------hhhHHHHHHHHHhccChHHHHHHHHHHHHHH
Confidence 356777777665 4999999999999999999988877765444
No 399
>2xtc_A F-box-like/WD repeat-containing protein TBL1X; transcription; 2.22A {Homo sapiens} PDB: 2xte_A 2xtd_A
Probab=33.67 E-value=19 Score=29.48 Aligned_cols=27 Identities=7% Similarity=0.141 Sum_probs=24.5
Q ss_pred HHHHHHhhCCCchhHHHHHhhhccCCC
Q psy14440 94 TMLKLLRQYNLRGTEEQLKKEINVNDL 120 (711)
Q Consensus 94 ~v~~yl~k~g~~~~e~~l~~e~~~~~~ 120 (711)
.|..||..-||..|.-+|..|+++.+.
T Consensus 11 LI~RYLqEsGf~hsAf~f~~Es~i~~~ 37 (90)
T 2xtc_A 11 LVYRYLQESGFSHSAFTFGIESHISQS 37 (90)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHTTGGGS
T ss_pred HHHHHHHHcCCHHHHHHHHHHhcCCcc
Confidence 689999999999999999999987654
No 400
>3cx8_B RHO guanine nucleotide exchange factor 11; signal transduction, protein complex, GTP-binding, lipoprotein, membrane, nucleotide-binding; HET: GSP; 2.00A {Rattus norvegicus} PDB: 3cx6_B* 3cx7_B* 1htj_F
Probab=31.52 E-value=12 Score=35.40 Aligned_cols=27 Identities=11% Similarity=0.174 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHhCCChHHHHHHHHHhc
Q psy14440 173 PVLVHMYIELVYNGHEHQATEMLHKHL 199 (711)
Q Consensus 173 p~f~~~yl~lv~~~~~~~a~~f~~~~~ 199 (711)
|+|+|+|.||.+.+..+++|+++-.+.
T Consensus 51 ~LlfyL~~d~yk~~~~Ke~rk~a~ei~ 77 (203)
T 3cx8_B 51 PLLFYLCSEVYQQTNPKDSRSLGKDIW 77 (203)
T ss_dssp HHHHHHHHHHHHTSCTTTCHHHHHHHH
T ss_pred HHHHHHHHHHHhccChHHHHHHHHHHH
Confidence 889999999999999998888777664
No 401
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=30.11 E-value=4.9e+02 Score=27.04 Aligned_cols=164 Identities=7% Similarity=0.075 Sum_probs=92.2
Q ss_pred CcEEEEEecCCC--eeEEEeecc------cCCEEEEEEc---CC----CCEEEEEe-CCCeEEEEECCCCeEEEEEecC-
Q psy14440 439 DILVRIMDERNA--ETTRTLVGH------EGPVRKLSFS---PD----RSLLLSCS-QDNTIRLWSLLLWRCLVVYKGH- 501 (711)
Q Consensus 439 d~~i~i~d~~~~--~~~~~l~~h------~~~V~~l~fs---pd----g~~L~s~s-~Dg~V~iwdl~t~~~~~~~~~h- 501 (711)
.-.+.+||+.+. +.++++.-. ...+..+.+. ++ +.+++.+. ..+.|.|+|+.+++..+....+
T Consensus 122 ~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~ 201 (381)
T 3q6k_A 122 RPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTF 201 (381)
T ss_dssp CCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGG
T ss_pred CceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCC
Confidence 346777888887 777665421 3457777777 22 33444443 4677999999988776655210
Q ss_pred -----------------CCCEEEEEEcCC----CCEEEEEECCCeEEEEECC-----C---CceeEEeecCC---CCeeE
Q psy14440 502 -----------------GHPVWDIKFSPH----GYYFASAGHDRMARLWATD-----S---YHPLRLFVGHY---SDVDC 549 (711)
Q Consensus 502 -----------------~~~V~~v~~sp~----g~~l~sgs~Dg~i~lwd~~-----~---~~~~~~~~~h~---~~V~~ 549 (711)
...|..|+++|+ ++.+....-.+. ++|.+. . ...++.+ |.. +.-..
T Consensus 202 ~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~-~ly~V~T~~L~~~~~~~~v~~~-G~kg~~s~~~~ 279 (381)
T 3q6k_A 202 KAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI-KVYSVNTKELKQKGGKLNPELL-GNRGKYNDAIA 279 (381)
T ss_dssp SCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS-EEEEEEHHHHSSTTCCCCCEEE-EECCTTCCEEE
T ss_pred ccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC-cEEEEEHHHhhCcchhhceEEe-eecCCCCCcce
Confidence 135778888887 566665554331 233221 1 1222222 222 33445
Q ss_pred EEEc-CCCCEEEEEEcCCcEEEEECCC-C---cEEEEe-eCC-CCCeEEEEEecCCCEEEEE
Q psy14440 550 VQFH-PNSNYVATGSSDRTIRLWDCVT-G---SHVRLL-TGH-KAPVYALSFSVCGRFLASA 604 (711)
Q Consensus 550 v~~s-p~~~~latgs~Dg~I~iwD~~~-~---~~v~~~-~~h-~~~I~~la~spdg~~Lasg 604 (711)
+++. .+|..+++--....|..|+..+ . .....+ ... -.....+++..+|.+.+..
T Consensus 280 ~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 280 LAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp EEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEE
T ss_pred EEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEE
Confidence 6665 5677777777788899999875 1 112222 221 2245666666566544443
No 402
>2d68_A FOP, FGFR1OP; alpha helical bundle, dimer, cell cycle; 1.60A {Homo sapiens}
Probab=29.83 E-value=27 Score=27.99 Aligned_cols=25 Identities=20% Similarity=0.196 Sum_probs=23.4
Q ss_pred HHHHHHhhCCCchhHHHHHhhhccC
Q psy14440 94 TMLKLLRQYNLRGTEEQLKKEINVN 118 (711)
Q Consensus 94 ~v~~yl~k~g~~~~e~~l~~e~~~~ 118 (711)
-|.|||...||.-|-.+|..|+++.
T Consensus 24 LVrEyLef~~l~~TlsVf~pEs~l~ 48 (82)
T 2d68_A 24 LVAEFLQFFNLDFTLAVFQPETSTL 48 (82)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHcCCcchHHhhhhccCCC
Confidence 5899999999999999999999875
No 403
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=27.78 E-value=63 Score=33.76 Aligned_cols=20 Identities=15% Similarity=0.129 Sum_probs=11.1
Q ss_pred HhhCCCchhHHHHHhhhccC
Q psy14440 99 LRQYNLRGTEEQLKKEINVN 118 (711)
Q Consensus 99 l~k~g~~~~e~~l~~e~~~~ 118 (711)
.++..|.++.+.+++=..+.
T Consensus 108 ~~~g~~~~Al~~~~~al~l~ 127 (382)
T 2h6f_A 108 QRDERSERAFKLTRDAIELN 127 (382)
T ss_dssp HHTCCCHHHHHHHHHHHHHC
T ss_pred HHCCChHHHHHHHHHHHHhC
Confidence 33444777777776544433
No 404
>1unl_D Cyclin-dependent kinase 5 activator 1; inhibitor, ATP-analogue, neurodegen diseases; HET: RRC; 2.2A {Homo sapiens} SCOP: a.74.1.1 PDB: 1unh_D* 1ung_D*
Probab=27.25 E-value=1.6e+02 Score=26.84 Aligned_cols=88 Identities=19% Similarity=0.243 Sum_probs=46.8
Q ss_pred CCCCCCChhHHH-HHHHHHhhCCC-----chhHHH--HHhhhccCCCCCCCCCccccccccccccC--CChhHHHHHHHH
Q psy14440 82 QSGKAPDKNTLI-TMLKLLRQYNL-----RGTEEQ--LKKEINVNDLGIDPNDSEIGDLLSAYESE--GDPNLYEDAYQD 151 (711)
Q Consensus 82 ~~~~~~~~~~~~-~v~~yl~k~g~-----~~~e~~--l~~e~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 151 (711)
-.+++-+-.+|+ -+.+||.+|=| .-+|.+ ||.= |.+=+|...... -+|+.....|-.
T Consensus 42 k~ivQASTsELLrCLG~Fl~~RC~~lk~~~p~d~VmWLR~V-------------DRsLLLQGWQD~aFI~PaNvVFvYmL 108 (208)
T 1unl_D 42 RVIVQASTSELLRCLGEFLCRRCYRLKHLSPTDPVLWLRSV-------------DRSLLLQGWQDQGFITPANVVFLYML 108 (208)
T ss_dssp ----CCSHHHHHHHHHHHHHHHCTTCTTCCTHHHHHHHHHH-------------HHHHHHTTSCSSCSCCHHHHHHHHHH
T ss_pred eeEEEccHHHHHHHHHHHHHHHhhhhccCCccceehhHHhh-------------hHHHHHccccccccccchhhhhHHHH
Confidence 346666666655 56779988775 233333 2210 111111112211 269999999999
Q ss_pred HHHHHhhhcccchhhhhhhhHHHHHHHHHHHHhCC
Q psy14440 152 LKKFIENSLDVYKYELGLVLYPVLVHMYIELVYNG 186 (711)
Q Consensus 152 l~~~v~~~ld~~k~el~~~l~p~f~~~yl~lv~~~ 186 (711)
.|+.|.+-+.. -.||..++ +.-+||.--+.|
T Consensus 109 ~R~~v~~~~~t-e~eLqa~v---LTCLYlsYSYmG 139 (208)
T 1unl_D 109 CRDVISSEVGS-DHELQAVL---LTCLYLSYSYMG 139 (208)
T ss_dssp HHHHSCTTCCC-HHHHHHHH---HHHHHHHHHHHC
T ss_pred HHHHcccccCC-HHHHHHHH---HHHHHHHHHhhC
Confidence 99999866443 56776543 334455444444
No 405
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=26.78 E-value=7.3e+02 Score=27.99 Aligned_cols=28 Identities=7% Similarity=0.028 Sum_probs=18.0
Q ss_pred CceEEEEECCCC-CEEEEEeCCCeEEEEe
Q psy14440 388 QQVTCAEISEDV-SILAVGFSESYIKLWS 415 (711)
Q Consensus 388 ~~V~~l~fs~dg-~~LatG~~dg~I~vWd 415 (711)
+.|.+++++|+. ..+.++...+.|..++
T Consensus 23 g~i~~i~~~p~~~~~~~~~~~~ggv~rS~ 51 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYARAAIGGAYRWD 51 (737)
T ss_dssp SCCCEEEECSSSTTCEEEECSSSCEEEEE
T ss_pred ceeeEEEECCCCCCEEEEEecCCcEEEeC
Confidence 379999999863 4555566555444443
No 406
>3ff5_A PEX14P, peroxisomal biogenesis factor 14; protein import, peroxin, 3 helices bundle, protein transport; HET: DPW; 1.80A {Rattus norvegicus}
Probab=25.90 E-value=35 Score=25.02 Aligned_cols=18 Identities=28% Similarity=0.324 Sum_probs=14.7
Q ss_pred HHHHHHHHHhhCCCchhH
Q psy14440 91 TLITMLKLLRQYNLRGTE 108 (711)
Q Consensus 91 ~~~~v~~yl~k~g~~~~e 108 (711)
.+..=++||++||++..|
T Consensus 29 p~~~K~~FL~sKGLt~~E 46 (54)
T 3ff5_A 29 PLATRRAFLKKKGLTDEE 46 (54)
T ss_dssp CHHHHHHHHHHTTCCHHH
T ss_pred CHHHHHHHHHHcCCCHHH
Confidence 344567999999999988
No 407
>3pgw_A U1-A; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 1fht_A 2u1a_A 2aym_A 2b0g_A
Probab=25.47 E-value=1.7e+02 Score=28.43 Aligned_cols=19 Identities=21% Similarity=0.127 Sum_probs=11.5
Q ss_pred HHhhCCCchhHHHHHhhhc
Q psy14440 98 LLRQYNLRGTEEQLKKEIN 116 (711)
Q Consensus 98 yl~k~g~~~~e~~l~~e~~ 116 (711)
|+.--.+.-||+.|+..+.
T Consensus 211 ~v~nl~~~~~~~~l~~~F~ 229 (282)
T 3pgw_A 211 FLTNLPEETNELMLSMLFN 229 (282)
T ss_pred EEeCCCCcCCHHHHHHHHH
Confidence 3333445667777777763
No 408
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=24.73 E-value=5.9e+02 Score=26.22 Aligned_cols=188 Identities=10% Similarity=-0.032 Sum_probs=98.3
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe------------E-EEEEecCCCCEEEEEEcCCCCEEEEEECCCeEEE
Q psy14440 462 PVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWR------------C-LVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARL 528 (711)
Q Consensus 462 ~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~~------------~-~~~~~~h~~~V~~v~~sp~g~~l~sgs~Dg~i~l 528 (711)
.|..|+.. +.+.+.-..||.|..|-....- . ...+. ....|..|+.. ..+.+..+.||.|+.
T Consensus 76 ~v~~va~G--~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~-~~~~i~~va~G--~~hs~al~~~G~v~~ 150 (423)
T 3mvd_K 76 DAVDISAG--GMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLID-LPGKALCISAG--DSHSACLLEDGRVFA 150 (423)
T ss_dssp SEEEEEEC--SSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECC-CSSCEEEEEEC--SSEEEEEETTSCEEE
T ss_pred CceEEeeC--CCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEc-CCCCEEEEEcC--cCeEEEEeCCCeEEE
Confidence 35555543 4466666778888888542210 0 01111 23356666554 345556678999999
Q ss_pred EEC--CCCce----------eEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCC--------------------
Q psy14440 529 WAT--DSYHP----------LRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTG-------------------- 576 (711)
Q Consensus 529 wd~--~~~~~----------~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~-------------------- 576 (711)
|-. ...-. ..........|..|+.. ..+.++-..||.|+.|-....
T Consensus 151 wG~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~ 228 (423)
T 3mvd_K 151 WGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASG--ADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKR 228 (423)
T ss_dssp EECEECSSSEEESBTTBCEEEEEESSTTCCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTT
T ss_pred EeCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEecC--CCeEEEEecCCeEEEeeCCcCCccCCCcccccccccccccc
Confidence 975 32111 11111223346666553 456666678999999964321
Q ss_pred ---cEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC-----------CeEEEEeeCCCCCEEEEEEeCCCCE
Q psy14440 577 ---SHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN-----------GHLLTLLTGHTDVVRALCFSRDGNI 642 (711)
Q Consensus 577 ---~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~s-----------g~~i~~l~~h~~~V~sl~fspdg~~ 642 (711)
............|..++... ...++.-..+|.|+.|-... .....-.......|..++.. ..+
T Consensus 229 ~~~~p~~v~~~~~~~v~~i~~g~-~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~G--~~h 305 (423)
T 3mvd_K 229 DLLRPTQLIITRAKPFEAIWATN-YCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGG--QHH 305 (423)
T ss_dssp TTSSCEEECCTTCCCEEEEEEET-TEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSEEEEEEC--SSE
T ss_pred cccCCeEEeecCCccEEEEEECC-cEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEEEcc--cCe
Confidence 11111112233566665542 22333335788999985432 11111111113456666543 345
Q ss_pred EEEEeCCCcEEEEeCCC
Q psy14440 643 LASSGQDCSVKLWDFAK 659 (711)
Q Consensus 643 Lasgs~Dg~V~iWdl~~ 659 (711)
.+.-..||.|..|=-..
T Consensus 306 t~alt~~G~v~~wG~n~ 322 (423)
T 3mvd_K 306 TVILTTDLKCSVVGRPE 322 (423)
T ss_dssp EEEEETTCCEEEEECCG
T ss_pred EEEEeCCCcEEEEECCC
Confidence 55567899999997543
No 409
>2qko_A Possible transcriptional regulator, TETR family P; TETR family protein, structural genomics, P protein structure initiative; 2.35A {Rhodococcus SP}
Probab=24.64 E-value=23 Score=33.14 Aligned_cols=32 Identities=22% Similarity=0.253 Sum_probs=24.1
Q ss_pred ChhHHHHHHHHHhhCCCch-hHHHHHhhhccCC
Q psy14440 88 DKNTLITMLKLLRQYNLRG-TEEQLKKEINVND 119 (711)
Q Consensus 88 ~~~~~~~v~~yl~k~g~~~-~e~~l~~e~~~~~ 119 (711)
....|.+.++.+.++||.. |=+.+-+++++..
T Consensus 30 r~~Il~aa~~lf~~~G~~~~tv~~IA~~agvs~ 62 (215)
T 2qko_A 30 RAALVNAAIEVLAREGARGLTFRAVDVEANVPK 62 (215)
T ss_dssp HHHHHHHHHHHHHHTCTTTCCHHHHHHHSSSTT
T ss_pred HHHHHHHHHHHHHHhChhhccHHHHHHHcCCCc
Confidence 3445668999999999984 5577777887764
No 410
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=24.53 E-value=7.9e+02 Score=27.66 Aligned_cols=184 Identities=14% Similarity=0.127 Sum_probs=89.0
Q ss_pred CCEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCeEEEEEecC-------CCCEEEEEEcCC-C-CEEEEEEC-C-----C
Q psy14440 461 GPVRKLSFSPDR-SLLLSCSQDNTIRLWSLLLWRCLVVYKGH-------GHPVWDIKFSPH-G-YYFASAGH-D-----R 524 (711)
Q Consensus 461 ~~V~~l~fspdg-~~L~s~s~Dg~V~iwdl~t~~~~~~~~~h-------~~~V~~v~~sp~-g-~~l~sgs~-D-----g 524 (711)
+.|.+|+++|.. ..++++...+.|..++-. ++.-..+..+ ...|.+|+++|. . ..++.++. . +
T Consensus 23 g~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~-G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~ 101 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYARAAIGGAYRWDPS-TETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPN 101 (737)
T ss_dssp SCCCEEEECSSSTTCEEEECSSSCEEEEETT-TTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCC
T ss_pred ceeeEEEECCCCCCEEEEEecCCcEEEeCCC-CCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccC
Confidence 379999999864 466667666666666532 2222222221 245899999983 2 34443321 1 1
Q ss_pred eEEEE-ECCCCceeEEeec-C--------CCCeeEEEEcCC-CCEEEEEEcC-CcEEEEECCCCcEEEEeeC--------
Q psy14440 525 MARLW-ATDSYHPLRLFVG-H--------YSDVDCVQFHPN-SNYVATGSSD-RTIRLWDCVTGSHVRLLTG-------- 584 (711)
Q Consensus 525 ~i~lw-d~~~~~~~~~~~~-h--------~~~V~~v~~sp~-~~~latgs~D-g~I~iwD~~~~~~v~~~~~-------- 584 (711)
...|| ..+.++.-..+.. . ...+.+++++|. .+.|+++... +.|. .....|+.-..+..
T Consensus 102 ~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~gl~-~S~DgG~tW~~~~~~~~~~~~~ 180 (737)
T 2cn3_A 102 MGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGNGLW-RSTDYGVTWSKVESFPNPGTYI 180 (737)
T ss_dssp CCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTCCEE-EESSTTSSCEECTTCCCCCCCB
T ss_pred CccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccCCcEE-EeCCCCcceecccCCCCCcccc
Confidence 23444 4444443332221 1 012468999984 4666666533 2221 22233332222221
Q ss_pred ---------CCCCeEEEEEecCC-------CEEEEEeCCCcEEEEEC-CCCeEEEEeeCCC-CC-EEEEEEeCCCCEEEE
Q psy14440 585 ---------HKAPVYALSFSVCG-------RFLASAGGDGNVHMWDL-SNGHLLTLLTGHT-DV-VRALCFSRDGNILAS 645 (711)
Q Consensus 585 ---------h~~~I~~la~spdg-------~~Lasgs~Dg~I~iwDl-~sg~~i~~l~~h~-~~-V~sl~fspdg~~Las 645 (711)
....+..+.++|.. ..|+++..++.-.||-. ..|+.-..+.+.. +. ...+.+++++.++++
T Consensus 181 ~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S~DgG~tW~~~~~~p~~~~~~~~~~~~~~~l~~~ 260 (737)
T 2cn3_A 181 YDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRSTDGGVTWKAVPGQPKGLLPHHGVLASNGMLYIT 260 (737)
T ss_dssp SCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEEEESSTTSCCEECTTCCCSSEEEEEEECTTSEEEEE
T ss_pred cCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEEEEcCCCCceEECCCCCCcccceEEEECCCCeEEEE
Confidence 12347778887743 24555554542223432 2233322222211 22 245567776666655
Q ss_pred E
Q psy14440 646 S 646 (711)
Q Consensus 646 g 646 (711)
.
T Consensus 261 ~ 261 (737)
T 2cn3_A 261 Y 261 (737)
T ss_dssp E
T ss_pred e
Confidence 4
No 411
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=23.88 E-value=7.6e+02 Score=27.20 Aligned_cols=56 Identities=14% Similarity=0.073 Sum_probs=36.5
Q ss_pred CCCCCeEEEEEecC--CCEEEEEeCCC----cEEEEECCCCeEEEEeeCC--CCCEEEEEEeCC
Q psy14440 584 GHKAPVYALSFSVC--GRFLASAGGDG----NVHMWDLSNGHLLTLLTGH--TDVVRALCFSRD 639 (711)
Q Consensus 584 ~h~~~I~~la~spd--g~~Lasgs~Dg----~I~iwDl~sg~~i~~l~~h--~~~V~sl~fspd 639 (711)
+|...+....|.|+ |--++.+.+++ -..+.|.++|+.+....+. .+....-.|.++
T Consensus 361 gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~~~~d~Gr~~~~Didp~ 424 (591)
T 2zux_A 361 GHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVYAGKDVGRGMAADIDPR 424 (591)
T ss_dssp CCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEECCSSCCCCEEEECCCTT
T ss_pred CCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcCCCCCCCceeEEecCCC
Confidence 78888888888887 45666666542 3556899999998777543 333333334443
No 412
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=23.50 E-value=6.2e+02 Score=26.02 Aligned_cols=257 Identities=10% Similarity=-0.003 Sum_probs=0.0
Q ss_pred EEEEECCCCCEEEEEeCC------------CeEEEEeCCCCceeeeccCccccccccccCCcEEEEEecCCC--------
Q psy14440 391 TCAEISEDVSILAVGFSE------------SYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNA-------- 450 (711)
Q Consensus 391 ~~l~fs~dg~~LatG~~d------------g~I~vWdl~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-------- 450 (711)
.++++..+|++.+-|..+ ..-.....-...............+++..+++.++.|-....
T Consensus 27 hs~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~G~~ht~al~~~gg~v~~wG~n~~GqLG~g~~ 106 (406)
T 4d9s_A 27 HSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNS 106 (406)
T ss_dssp EEEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTTTEEEEEECCGGGTTCSSSC
T ss_pred eEEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEeCcceEEEEECCCCEEEEEcCCCCcCCCCCCC
Q ss_pred ----eeEEEeecccCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCC----------eEEEEEecCCCCEEEEEEcCCCCE
Q psy14440 451 ----ETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLW----------RCLVVYKGHGHPVWDIKFSPHGYY 516 (711)
Q Consensus 451 ----~~~~~l~~h~~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~t~----------~~~~~~~~h~~~V~~v~~sp~g~~ 516 (711)
.......-....|..++. -..+.+.-..||.|+.|-.... ......-.....+.-..++....+
T Consensus 107 ~~~~~p~~v~~l~~~~i~~ia~--G~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~i~~va~G~~h 184 (406)
T 4d9s_A 107 SDLFTPLPIKALHGIRIKQIAC--GDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEH 184 (406)
T ss_dssp CCEEEEEECGGGTTCCEEEEEE--CSSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSE
T ss_pred CccccceEecccCCCCEEEEEE--ChhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEecccCCCcEEEEecCCCe
Q ss_pred EEEEECCCeEEEEE------------CCCCceeEEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCC--------
Q psy14440 517 FASAGHDRMARLWA------------TDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTG-------- 576 (711)
Q Consensus 517 l~sgs~Dg~i~lwd------------~~~~~~~~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~-------- 576 (711)
.+....+|.|+.|- .....+.+........|..|+.. ..+.++-+.+|.|+.|-....
T Consensus 185 s~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~G--~~ht~~l~~~G~v~~wG~n~~GqlG~g~~ 262 (406)
T 4d9s_A 185 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACG--WRHTISVSYSGALYTYGWSKYGQLGHGDL 262 (406)
T ss_dssp EEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEEC--SSEEEEEETTCCEEEEECCTTSTTCSSSC
T ss_pred EEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEEC--CCcEEEEcCCCCEEEeeCCCCCCCCCCCC
Q ss_pred ----cEEEEeeCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCC------------eEEEEeeCCCCCEEEEEEeCCC
Q psy14440 577 ----SHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNG------------HLLTLLTGHTDVVRALCFSRDG 640 (711)
Q Consensus 577 ----~~v~~~~~h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~sg------------~~i~~l~~h~~~V~sl~fspdg 640 (711)
.....-......|..|+.. ..+.++-..||.|+.|=.... ............|..++.. .
T Consensus 263 ~~~~~p~~v~~~~~~~v~~i~~G--~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~va~G--~ 338 (406)
T 4d9s_A 263 EDHLIPHKLEALSNSFISQISGG--WRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCG--W 338 (406)
T ss_dssp CCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSSSSSCEEEEEEECCGGGCCEEEEEEC--S
T ss_pred cCccccEEecccCCCCEEEEEec--CCEEEEEcCCCeEEEeeCCCCCCCCCCCCCCCccCEEEeccCCCcEEEEEeC--C
Q ss_pred CEEEEEeCCCcEEEE
Q psy14440 641 NILASSGQDCSVKLW 655 (711)
Q Consensus 641 ~~Lasgs~Dg~V~iW 655 (711)
...+.-..||.|..|
T Consensus 339 ~hs~alt~~G~v~~w 353 (406)
T 4d9s_A 339 RHTLAVTERNNVFAW 353 (406)
T ss_dssp SEEEEEETTSCEEEE
T ss_pred CeEEEEeCCCCEEEe
No 413
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=22.81 E-value=6.9e+02 Score=26.32 Aligned_cols=186 Identities=11% Similarity=0.097 Sum_probs=96.2
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCeEEEEECC---CCe-----------EE-EEEec-CCCCEEEEEEcCCCCEEEEEECCC
Q psy14440 461 GPVRKLSFSPDRSLLLSCSQDNTIRLWSLL---LWR-----------CL-VVYKG-HGHPVWDIKFSPHGYYFASAGHDR 524 (711)
Q Consensus 461 ~~V~~l~fspdg~~L~s~s~Dg~V~iwdl~---t~~-----------~~-~~~~~-h~~~V~~v~~sp~g~~l~sgs~Dg 524 (711)
..|..++.. ..+.+.-..||.|+.|-.. .++ .. ..+.. ....|..|+.. ....+..+.+|
T Consensus 148 ~~i~~va~G--~~hs~alt~~G~vy~wG~n~~~~GqLG~~~~~~~~~~~P~~v~~l~~~~i~~va~G--~~hs~alt~~G 223 (473)
T 3of7_A 148 HKVVQLAAT--DNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPG--KDHILFLDEEG 223 (473)
T ss_dssp CCEEEEEEC--SSEEEEEETTSCEEEEECEEETTEEEESBTTTBSCEEEEEECCCCCSSCEEEEEEC--SSEEEEEETTS
T ss_pred CcEEEEEcc--CCEEEEEeCCCeEEEeeCCcCCCCccCCCCCCCccccCcEEccccCCCCEEEEEec--CCeEEEEeCCC
Confidence 456666654 3344555677888888641 111 01 11111 12347666654 34666667899
Q ss_pred eEEEEECCCCcee---------------EEeecCCCCeeEEEEcCCCCEEEEEEcCCcEEEEECCCC------------c
Q psy14440 525 MARLWATDSYHPL---------------RLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTG------------S 577 (711)
Q Consensus 525 ~i~lwd~~~~~~~---------------~~~~~h~~~V~~v~~sp~~~~latgs~Dg~I~iwD~~~~------------~ 577 (711)
.|+.|-....-.+ ..+ ....|..|+.. ..+.++-+.+|.|+.|-.... .
T Consensus 224 ~v~~wG~n~~GqLG~~~~~~~~~~~~~p~~~--~~~~v~~Ia~G--~~hs~alt~~G~v~~wG~n~~GqlG~~~~~~~~~ 299 (473)
T 3of7_A 224 MVFAWGNGQQNQLGRKVMERFRLKTLDPRPF--GLRHVKYIASG--ENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGA 299 (473)
T ss_dssp CEEEEECCTTSTTSSCCCGGGTTTTCSCEEC--SCCSEEEEEEC--SSEEEEEETTSCEEEEEECTTSTTCCCSCCCTTC
T ss_pred eEEEEeCCCCCCCCCCccccccccccCceec--CCcceEEEecC--CCeEEEEecCCCEEEeCCCCCCCcCCCCcccCCc
Confidence 9999965432111 011 11346666553 445566667899999964321 1
Q ss_pred EE---EEeeC-CCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC-C-------------------eE--E---EEeeCCC
Q psy14440 578 HV---RLLTG-HKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN-G-------------------HL--L---TLLTGHT 628 (711)
Q Consensus 578 ~v---~~~~~-h~~~I~~la~spdg~~Lasgs~Dg~I~iwDl~s-g-------------------~~--i---~~l~~h~ 628 (711)
.+ ..+.. ....|..|+.. ...-++-..||.|+.|-... | .. . ..+.+ .
T Consensus 300 ~~~~P~~v~~~~~~~i~~ia~G--~~hs~~lt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~P~~v~~-~ 376 (473)
T 3of7_A 300 LVTKPKRLALPDNVVIRSIAAG--EHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNN-V 376 (473)
T ss_dssp EEEEEEECCCCTTCCEEEEEEC--SSEEEEEETTSCEEEEEECTTCTTCCCGGGCCTTCEECTTSCEEEEEEEEECCS-S
T ss_pred eeeccccccccCCccEEEEEeC--CCeEEEEeCCCeEEEEECCCCCccCCCccccccccccccCCceeeeccCcccCC-C
Confidence 11 11111 12356666654 33344446788888885322 1 11 0 11111 1
Q ss_pred CCEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Q psy14440 629 DVVRALCFSRDGNILASSGQDCSVKLWDFAK 659 (711)
Q Consensus 629 ~~V~sl~fspdg~~Lasgs~Dg~V~iWdl~~ 659 (711)
..|..|+.. ....++-..||.|..|=...
T Consensus 377 ~~v~~Ia~G--~~hs~al~~~G~vy~wG~n~ 405 (473)
T 3of7_A 377 PKFKSVAAG--SHHSVAVAQNGIAYSWGFGE 405 (473)
T ss_dssp CCEEEEEEC--SSEEEEEETTSCEEEEECCT
T ss_pred CceEEEEeC--CCeEEEEeCCCcEEEeeCCC
Confidence 156666554 34555557899999997654
No 414
>3ulq_B Transcriptional regulatory protein COMA; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} PDB: 2krf_A
Probab=22.81 E-value=44 Score=27.02 Aligned_cols=19 Identities=11% Similarity=0.017 Sum_probs=13.7
Q ss_pred HHHHHHhhCCCchhHHHHHh
Q psy14440 94 TMLKLLRQYNLRGTEEQLKK 113 (711)
Q Consensus 94 ~v~~yl~k~g~~~~e~~l~~ 113 (711)
.|+.++. .|++..|-+-+.
T Consensus 36 ~Vl~l~~-~G~s~~eIA~~L 54 (90)
T 3ulq_B 36 LILQEVE-KGFTNQEIADAL 54 (90)
T ss_dssp HHHHHHH-TTCCHHHHHHHH
T ss_pred HHHHHHH-cCCCHHHHHHHH
Confidence 6777776 999988765443
No 415
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=22.39 E-value=3.4e+02 Score=22.54 Aligned_cols=25 Identities=4% Similarity=0.113 Sum_probs=14.1
Q ss_pred EEEEcCCCCEEEEEECCCeEEEEECCC
Q psy14440 507 DIKFSPHGYYFASAGHDRMARLWATDS 533 (711)
Q Consensus 507 ~v~~sp~g~~l~sgs~Dg~i~lwd~~~ 533 (711)
.+.+..+|++++... ++.+ +|...+
T Consensus 60 ~l~l~~dGNLVl~d~-~~~~-iW~S~t 84 (113)
T 3mez_B 60 FMRLGHSGELDITDD-RLNT-VFVSNT 84 (113)
T ss_dssp EEEECTTSCEEEECT-TSCE-EEECSC
T ss_pred EEEEeCCCcEEEECC-CCCE-EEECCC
Confidence 456666777666533 3433 676544
No 416
>1ng7_A Poliovirus 3A-N, genome polyprotein [core protein P3A]; helical hairpin, unfolded domain, symmetric dimer, viral protein; NMR {Human poliovirus 1} SCOP: a.178.1.1
Probab=22.32 E-value=15 Score=27.55 Aligned_cols=14 Identities=0% Similarity=-0.173 Sum_probs=12.3
Q ss_pred HHHHHHhhCCCchh
Q psy14440 94 TMLKLLRQYNLRGT 107 (711)
Q Consensus 94 ~v~~yl~k~g~~~~ 107 (711)
.|++|++++||.--
T Consensus 33 eV~~YC~~kGwIiP 46 (60)
T 1ng7_A 33 EVRDYCEKKGWIVN 46 (60)
T ss_dssp HHHHHHHHHTCCCC
T ss_pred HHHHHHHHCCceec
Confidence 79999999999853
No 417
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=21.15 E-value=8.5e+02 Score=26.79 Aligned_cols=94 Identities=14% Similarity=0.173 Sum_probs=54.4
Q ss_pred CeEEEEECCCCeEEEEE--ecCC-----------CCEEEEEEcCCCC-EEEEEE----CCCeEEEEECCCCceeEEeecC
Q psy14440 482 NTIRLWSLLLWRCLVVY--KGHG-----------HPVWDIKFSPHGY-YFASAG----HDRMARLWATDSYHPLRLFVGH 543 (711)
Q Consensus 482 g~V~iwdl~t~~~~~~~--~~h~-----------~~V~~v~~sp~g~-~l~sgs----~Dg~i~lwd~~~~~~~~~~~~h 543 (711)
..|..||...++....+ .... +.+.-..+.-||+ -|+.|+ .||++ +|.+. .+|
T Consensus 292 ~~v~A~d~~~~~L~~~W~~d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~Gs~~iD~dG~~-L~st~--------~gH 362 (591)
T 2zux_A 292 TMLVAYNFRDGKLSKLWTLDSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIFGSMAVDHDGKG-MYSTG--------LGH 362 (591)
T ss_dssp CEEEEEEEETTEEEEEEEEETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEETTEEECTTSCE-EEECS--------CCC
T ss_pred eEEEEEECCCCceEEEEEecCCCCCcccccccCCCCCeeEeCCCCCCceEEEeeeEECCCCCE-eeeCC--------CCC
Confidence 35888998777664443 2210 2233334444553 344332 34443 45442 278
Q ss_pred CCCeeEEEEcCC--CCEEEEEEcCC----cEEEEECCCCcEEEEeeC
Q psy14440 544 YSDVDCVQFHPN--SNYVATGSSDR----TIRLWDCVTGSHVRLLTG 584 (711)
Q Consensus 544 ~~~V~~v~~sp~--~~~latgs~Dg----~I~iwD~~~~~~v~~~~~ 584 (711)
...+....|.|+ |..++.+..++ -..+.|..+|+.+....+
T Consensus 363 GDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~~ 409 (591)
T 2zux_A 363 GDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVYA 409 (591)
T ss_dssp CSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEECC
T ss_pred CCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcCC
Confidence 888888888886 44666666542 355789899988776643
No 418
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=20.36 E-value=96 Score=26.04 Aligned_cols=40 Identities=23% Similarity=0.401 Sum_probs=31.6
Q ss_pred ChhHHHHHHHHHHHHHhhh----cccch---hhhhhhhHHHHHHHHH
Q psy14440 141 DPNLYEDAYQDLKKFIENS----LDVYK---YELGLVLYPVLVHMYI 180 (711)
Q Consensus 141 ~~~~~~~~~~~l~~~v~~~----ld~~k---~el~~~l~p~f~~~yl 180 (711)
+-.....+-..+++|++.. .+.|+ .||..++.||+-.+|=
T Consensus 38 ek~~i~~~i~e~~~wL~~~~~a~~e~i~~k~~eL~~~~~~i~~k~y~ 84 (113)
T 3lof_A 38 DKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQ 84 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567778888999999875 45555 4888999999999884
Done!