Your job contains 1 sequence.
>psy14440
MDQLPSLMDDPPQESFHSVPIIQQTLSPQQPPVSPQHQNMMSPIQQHSLSPHTQAPSPQP
PAQPQQVPSPYHTPPPSQTSKQSGKAPDKNTLITMLKLLRQYNLRGTEEQLKKEINVNDL
GIDPNDSEIGDLLSAYESEGDPNLYEDAYQDLKKFIENSLDVYKYELGLVLYPVLVHMYI
ELVYNGHEHQATEMLHKHLMDHEPHYQEDLRKLSSVTKRDQIRTNEIAETFRSTEFIIRM
SRDTLSLLKRHLQEKKHTVLLNIVQEHLYFDMYEGEATRQDNKAKIYYGMPREPDLQNTI
AVPDDDEEEAGEGGDKPKKKKAKKDSMFSKKTKSDPNAPPVDRIPLPPLKDSEKIDKLKA
LREATKRVTLGPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK
LKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQ
DNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLF
VGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRF
LASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKL
SDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILLRGP
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14440
(711 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0010356 - symbol:Taf5 "TBP-associated factor 5" sp... 1228 2.2e-164 3
UNIPROTKB|E1C4U3 - symbol:E1C4U3 "Uncharacterized protein... 1502 2.6e-160 2
UNIPROTKB|E1BEN8 - symbol:TAF5 "Uncharacterized protein" ... 1495 2.9e-159 2
UNIPROTKB|E2RE41 - symbol:TAF5 "Uncharacterized protein" ... 1492 2.9e-159 2
RGD|1311332 - symbol:Taf5 "TAF5 RNA polymerase II, TATA b... 1490 6.0e-159 2
UNIPROTKB|Q15542 - symbol:TAF5 "Transcription initiation ... 1493 1.6e-158 2
MGI|MGI:2442144 - symbol:Taf5 "TAF5 RNA polymerase II, TA... 1484 2.6e-158 2
ZFIN|ZDB-GENE-051120-180 - symbol:taf5 "TAF5 RNA polymera... 1467 2.4e-153 2
UNIPROTKB|F1S845 - symbol:TAF5 "Uncharacterized protein" ... 1073 1.7e-139 2
DICTYBASE|DDB_G0287337 - symbol:taf5 "TFIID subunit" spec... 655 9.5e-106 4
TAIR|locus:2179300 - symbol:TAF5 "AT5G25150" species:3702... 725 4.2e-98 2
CGD|CAL0000165 - symbol:orf19.536 species:5476 "Candida a... 620 6.2e-98 3
SGD|S000000402 - symbol:TAF5 "Subunit (90 kDa) of TFIID a... 708 3.0e-94 3
POMBASE|SPCC5E4.03c - symbol:taf5 "SAGA complex subunit/T... 566 6.1e-92 3
MGI|MGI:1919039 - symbol:Taf5l "TAF5-like RNA polymerase ... 728 1.0e-86 2
UNIPROTKB|O75529 - symbol:TAF5L "TAF5-like RNA polymerase... 721 2.1e-86 2
UNIPROTKB|E2RR78 - symbol:TAF5L "Uncharacterized protein"... 722 4.4e-86 2
UNIPROTKB|F1N575 - symbol:TAF5L "Uncharacterized protein"... 720 5.7e-86 2
UNIPROTKB|F1RG42 - symbol:TAF5L "Uncharacterized protein"... 712 1.0e-84 2
UNIPROTKB|E1C8E9 - symbol:TAF5L "Uncharacterized protein"... 697 1.3e-82 2
UNIPROTKB|E1BHK9 - symbol:E1BHK9 "Uncharacterized protein... 672 1.9e-81 2
ZFIN|ZDB-GENE-030131-5987 - symbol:taf5l "TAF5-like RNA p... 719 5.1e-81 2
POMBASE|SPBC15D4.14 - symbol:taf73 "transcription factor ... 541 1.5e-79 3
WB|WBGene00006386 - symbol:taf-5 species:6239 "Caenorhabd... 668 1.4e-76 2
FB|FBgn0011569 - symbol:can "cannonball" species:7227 "Dr... 681 2.2e-76 2
ASPGD|ASPL0000054735 - symbol:AN0292 species:162425 "Emer... 596 9.9e-64 2
FB|FBgn0039067 - symbol:wda "will decrease acetylation" s... 378 5.7e-38 3
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 330 4.7e-29 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 354 9.9e-29 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 313 3.3e-27 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 313 3.3e-27 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 313 3.3e-27 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 313 3.3e-27 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 313 3.3e-27 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 313 3.3e-27 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 311 5.4e-27 1
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 244 7.8e-27 2
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 307 1.5e-26 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 307 1.5e-26 1
POMBASE|SPBC354.03 - symbol:swd3 "WD repeat protein Swd3"... 290 1.7e-26 2
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 305 2.4e-26 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 304 3.1e-26 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 303 4.0e-26 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 303 4.0e-26 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 302 5.1e-26 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 311 6.5e-26 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 300 8.5e-26 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 297 1.8e-25 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 326 1.8e-25 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 292 6.3e-25 1
TAIR|locus:2060560 - symbol:LIS "AT2G41500" species:3702 ... 309 1.2e-24 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 287 2.2e-24 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 286 2.8e-24 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 286 2.8e-24 1
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 296 3.2e-24 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 293 3.9e-24 1
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 301 4.4e-24 1
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 292 6.9e-24 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 282 7.6e-24 1
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 298 1.2e-23 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 242 1.3e-23 2
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 296 1.7e-23 1
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 246 1.8e-23 3
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 293 1.8e-23 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 299 1.9e-23 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 294 2.0e-23 1
UNIPROTKB|A6QQU1 - symbol:KATNB1 "KATNB1 protein" species... 300 2.2e-23 1
UNIPROTKB|E2QTQ5 - symbol:KATNB1 "Uncharacterized protein... 299 2.7e-23 1
UNIPROTKB|Q9BVA0 - symbol:KATNB1 "Katanin p80 WD40 repeat... 299 2.7e-23 1
RGD|1311256 - symbol:Katnb1 "katanin p80 (WD repeat conta... 299 2.7e-23 1
MGI|MGI:1921437 - symbol:Katnb1 "katanin p80 (WD40-contai... 299 2.7e-23 1
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 289 3.0e-23 1
UNIPROTKB|Q8IU52 - symbol:TUWD12 "POC1 centriolar protein... 276 3.4e-23 1
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 293 3.9e-23 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 292 5.1e-23 1
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 241 6.5e-23 3
POMBASE|SPAC6B12.15 - symbol:cpc2 "RACK1 ortholog Cpc2" s... 272 9.1e-23 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 289 1.1e-22 1
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 242 1.2e-22 3
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 242 2.5e-22 3
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 242 2.5e-22 3
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 242 2.5e-22 3
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 242 2.5e-22 3
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 242 2.5e-22 3
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 242 2.5e-22 3
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 242 2.5e-22 3
CGD|CAL0000124 - symbol:ASC1 species:5476 "Candida albica... 268 2.5e-22 1
UNIPROTKB|P83774 - symbol:ASC1 "Guanine nucleotide-bindin... 268 2.5e-22 1
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 289 2.5e-22 1
RGD|1563991 - symbol:RGD1563991 "similar to TAF5-like RNA... 170 2.6e-22 2
RGD|1589350 - symbol:LOC681928 "similar to TAF5-like RNA ... 170 2.6e-22 2
ASPGD|ASPL0000014385 - symbol:cpcB species:162425 "Emeric... 266 4.1e-22 1
UNIPROTKB|G4MQX3 - symbol:MGG_04719 "Guanine nucleotide-b... 266 4.1e-22 1
GENEDB_PFALCIPARUM|PF11_0400 - symbol:PF11_0400 "hypothet... 278 4.1e-22 3
UNIPROTKB|Q8IHX6 - symbol:PF11_0400 "Conserved Plasmodium... 278 4.1e-22 3
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 241 4.4e-22 2
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 239 6.2e-22 3
POMBASE|SPAC29E6.01 - symbol:pof11 "F-box protein Pof11" ... 281 1.2e-21 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 275 1.8e-21 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 275 1.8e-21 1
WARNING: Descriptions of 1472 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 1228 (437.3 bits), Expect = 2.2e-164, Sum P(3) = 2.2e-164
Identities = 228/436 (52%), Positives = 308/436 (70%)
Query: 275 GEATRQDNKAKIYYGMPREPDLQN--TIAVXXXXXXXXXXXXXXXXXXXXXXXSMFSKKT 332
GEA RQDNK ++YYG+ +E D Q T A + SKK+
Sbjct: 263 GEAKRQDNKMRVYYGLLKEVDFQTLTTPAPAPEEEDDDPDAPDRPKKKKPKKDPLLSKKS 322
Query: 333 KSDPNAPPVDRIPLPPLKDSEKIDKLKALREATKRVTLGPESLPSIACYTLLNARQQVTC 392
KSDPNAP +DRIPLP LKDS+K+ KLKALREA+KR+ L + LPS YT+LN+ Q VTC
Sbjct: 323 KSDPNAPSIDRIPLPELKDSDKLLKLKALREASKRLALSKDQLPSAVFYTVLNSHQGVTC 382
Query: 393 AEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAET 452
AEIS+D ++LA GF +S +++WSL P KL+ +K +D L++++ E DI VR++D+R+ E
Sbjct: 383 AEISDDSTMLACGFGDSSVRIWSLTPAKLRTLKDADSLRELDKESADINVRMLDDRSGEV 442
Query: 453 TRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSP 512
TR+L+GH GPV + +F+P+ +LLLSCS+D+TIRLWSLL W C+V Y+GH +PVWD++F+P
Sbjct: 443 TRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAP 502
Query: 513 HGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWD 572
HGYYF S +D+ ARLWATDS LR+FVGH SDVDCVQFHPNSNYVATGSSDRT+RLWD
Sbjct: 503 HGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWD 562
Query: 573 CVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVR 632
+TG VRL+TGHK V +L+FS CGR+LAS D N+ +WDLSN V
Sbjct: 563 NMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVT 622
Query: 633 ALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTK 692
+ FSRDG +LA++G D ++ LWDF K++++ + + +SH D +N YL+R++ +K
Sbjct: 623 TITFSRDGTVLAAAGLDNNLTLWDFHKVTEDYISNHITVSHHQD-ENDEDVYLMRTFPSK 681
Query: 693 ASPLLHLIFSRRNILL 708
SP + L F+RRN+L+
Sbjct: 682 NSPFVSLHFTRRNLLM 697
Score = 309 (113.8 bits), Expect = 2.2e-164, Sum P(3) = 2.2e-164
Identities = 56/137 (40%), Positives = 94/137 (68%)
Query: 141 DPNLYEDAYQDLKKFIENSLDVYKYELGLVLYPVLVHMYIELVYNGHEHQATEMLHKHLM 200
D YE AY++L+ F+E+SLD+YK+EL +VLYP+LV +Y +++ +G +A E + K+
Sbjct: 112 DAQHYEQAYKELRTFVEDSLDIYKHELSMVLYPILVQIYFKILASGLREKAKEFIEKYKC 171
Query: 201 DHEPHYQEDLRKLSSVTKRDQIRTNEIAETFRSTEFIIRMSRDTLSLLKRHLQEKKHTVL 260
D + +Y E L L ++K +++ N++ +F+IRMSRD+ SL KRH+Q+++ V+
Sbjct: 172 DLDGYYIEGLFNLLLLSKPEELLENDLVVAMEQDKFVIRMSRDSHSLFKRHIQDRRQEVV 231
Query: 261 LNIVQEHLYFDMYEGEA 277
+IV ++L+FD YEG A
Sbjct: 232 ADIVSKYLHFDTYEGMA 248
Score = 100 (40.3 bits), Expect = 2.2e-164, Sum P(3) = 2.2e-164
Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 88 DKNTLITMLKLLRQYNLRGTEEQLKKEINVNDLGIDP-NDSEIGDLLSAYESEGDPN 143
DK L+ +LKL+++Y L+ TEE L +E NV+ + + ++S++ +L A GD N
Sbjct: 19 DKRELLCLLKLIKKYQLKSTEELLCQEANVSSVELSEISESDVQQVLGAVLGAGDAN 75
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 1502 (533.8 bits), Expect = 2.6e-160, Sum P(2) = 2.6e-160
Identities = 287/606 (47%), Positives = 404/606 (66%)
Query: 121 GIDPNDSEIGDLLSAYESEGDPNLYEDAYQDLKKFIENSLDVYKYELGLVLYPVLVHMYI 180
G+ + ++ +LSAY +GDP LYE+ Y LK FIE SLD ++ EL + YP+ VHMY+
Sbjct: 170 GVVEDQPDVSAVLSAYNQQGDPTLYEEYYSGLKNFIECSLDCHRAELSQLFYPLFVHMYL 229
Query: 181 ELVYNGHEHQATEMLHKHLMDHEPHYQEDLRKLSSVTKRDQIRTNEIAETFRSTEFIIRM 240
ELVYN HE +A + D E +YQ+DLR LSS+TK++ ++ NE FR+++F++R+
Sbjct: 230 ELVYNQHESEAKSFFERFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRI 289
Query: 241 SRDTLSLLKRHLQEKKHTVLLNIVQEHLYFDMYEG-----------------EATRQDNK 283
SRD+ LLKRHLQEK++ + NIVQEHLY D+++G EA R+ NK
Sbjct: 290 SRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANK 349
Query: 284 AKIYYGMPREPDLQNTIAVXXXXXXXXXXXXXXXXXXXXXXXSMFSKKTKSDPNAPPVDR 343
AK+++G+ +EP+ + S+ SK K DPNAPP +R
Sbjct: 350 AKVFFGLLKEPEFDVPL---DDEDEEGENEEGKPKKKKAKRDSVGSKSKKQDPNAPPQNR 406
Query: 344 IPLPPLKDSEKIDKLKALREATKRVTLGPESLPSIACYTLLNARQQVTCAEISEDVSILA 403
IPLP LKDS+K+DK+ ++EA +RV LGPE LPSI YT LNA Q +T +I++D S++
Sbjct: 407 IPLPELKDSDKLDKVMNMKEAARRVRLGPECLPSICFYTFLNAYQGLTAVDITDDSSMIV 466
Query: 404 VGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPV 463
GF++S +++WS+ P+KL+++K++ L I+ E DD+L RIMDE+ A + L GH GPV
Sbjct: 467 GGFADSTVRVWSVTPKKLRSVKAAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPV 526
Query: 464 RKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHD 523
SFSPDR+ LLSCS+D T+RLWSL + CLV YKGH +PVWD +FSP+GYYF S GHD
Sbjct: 527 YGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHD 586
Query: 524 RMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLT 583
R+ARLWATD Y PLR+F GH +DV C +FHPNSNY+ATGS+DRT+RLWD + G+ VR+ T
Sbjct: 587 RVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFT 646
Query: 584 GHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNIL 643
GHK P+++L+FS GRFLA+ DG V +WD+ + D + AL FSRDG IL
Sbjct: 647 GHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEIL 706
Query: 644 ASSGQDCSVKLWDFAKLSDEVGTEEVNLSHS-ADIKNSSLAYLVRSYKTKASPLLHLIFS 702
AS D +V+LWD K +++ T++ + ++ +S L+ +Y TK++P++HL F+
Sbjct: 707 ASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVVHLHFT 766
Query: 703 RRNILL 708
RRN+LL
Sbjct: 767 RRNLLL 772
Score = 81 (33.6 bits), Expect = 2.6e-160, Sum P(2) = 2.6e-160
Identities = 25/74 (33%), Positives = 36/74 (48%)
Query: 75 PPSQTSKQSGKAPDKNTLITMLKLLRQYNLRGTEEQLKKEINV--NDLGIDPNDSEIGDL 132
P + S A D+ TL+ +L+ LR+ NLR +EE L++E + DLG L
Sbjct: 60 PSAPGPAASPAALDRQTLVAVLQFLRRSNLRESEEILRREARLLGEDLGAAALSPAGAGL 119
Query: 133 LSAYESEGDPNLYE 146
A EGD + E
Sbjct: 120 PGASGGEGDASSSE 133
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 1495 (531.3 bits), Expect = 2.9e-159, Sum P(2) = 2.9e-159
Identities = 286/610 (46%), Positives = 409/610 (67%)
Query: 117 VNDLGIDPNDSEIGDLLSAYESEGDPNLYEDAYQDLKKFIENSLDVYKYELGLVLYPVLV 176
V + ++ + ++ +LSAY +GDP +YE+ Y LK FIE SLD ++ EL + YP+ V
Sbjct: 187 VGSVSVE-DQPDVSAVLSAYSQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLFYPLFV 245
Query: 177 HMYIELVYNGHEHQATEMLHKHLMDHEPHYQEDLRKLSSVTKRDQIRTNEIAETFRSTEF 236
HMY+ELVYN HE++A K D E +YQ+DLR LSS+TK++ ++ NE FR+++F
Sbjct: 246 HMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKF 305
Query: 237 IIRMSRDTLSLLKRHLQEKKHTVLLNIVQEHLYFDMYEG-----------------EATR 279
++R+SRD+ LLKRHLQEK++ + NIVQEHLY D+++G EA R
Sbjct: 306 VLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKR 365
Query: 280 QDNKAKIYYGMPREPDLQNTIAVXXXXXXXXXXXXXXXXXXXXXXXSMFSKKTKSDPNAP 339
+ NK+K+++G+ +EP+++ + S+ SK K DPNAP
Sbjct: 366 EANKSKVFFGLLKEPEIEVPL---DDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDPNAP 422
Query: 340 PVDRIPLPPLKDSEKIDKLKALREATKRVTLGPESLPSIACYTLLNARQQVTCAEISEDV 399
P +RIPLP LKDS+K+DK+ ++E TKRV LGP+ LPSI YT LNA Q +T ++++D
Sbjct: 423 PQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDDS 482
Query: 400 SILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGH 459
S++A GF++S +++WS+ P+KL+++K + L I+ E DD+L RIMDE+ A + L GH
Sbjct: 483 SLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGH 542
Query: 460 EGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFAS 519
GPV SFSPDR+ LLS S+D T+RLWSL + CLV YKGH +PVWD +FSP+GYYF S
Sbjct: 543 SGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS 602
Query: 520 AGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHV 579
GHDR+ARLWATD Y PLR+F GH +DV+C +FHPNSNYVATGS+DRT+RLWD + G+ V
Sbjct: 603 GGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCV 662
Query: 580 RLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRD 639
R+ TGHK P+++L+FS GRFLA+ DG V +WD+ + D V +L FSRD
Sbjct: 663 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRD 722
Query: 640 GNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHS-ADIKNSSLAYLVRSYKTKASPLLH 698
G ILAS D +V+LWD K ++V T++ + ++ +S L+ +Y TK++P++H
Sbjct: 723 GEILASGSMDNTVRLWDAVKAFEDVETDDFTTATGHINLPENSQELLLGTYMTKSTPVVH 782
Query: 699 LIFSRRNILL 708
L F+RRN++L
Sbjct: 783 LHFTRRNLVL 792
Score = 78 (32.5 bits), Expect = 2.9e-159, Sum P(2) = 2.9e-159
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 74 PPPSQTSKQSGKAP-DKNTLITMLKLLRQYNLRGTEEQLKKE 114
P P+ + S AP D+ TL+ +L+ LRQ NLR EE L++E
Sbjct: 80 PVPAAAPEAS--APHDRQTLLAVLQFLRQSNLREAEEALRRE 119
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 1492 (530.3 bits), Expect = 2.9e-159, Sum P(2) = 2.9e-159
Identities = 285/610 (46%), Positives = 409/610 (67%)
Query: 117 VNDLGIDPNDSEIGDLLSAYESEGDPNLYEDAYQDLKKFIENSLDVYKYELGLVLYPVLV 176
V + ++ + ++ +LSAY +GDP +YE+ Y LK FIE SLD ++ EL + YP+ V
Sbjct: 188 VGSVAVE-DQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLFYPLFV 246
Query: 177 HMYIELVYNGHEHQATEMLHKHLMDHEPHYQEDLRKLSSVTKRDQIRTNEIAETFRSTEF 236
HMY+ELVYN HE++A K D E +YQ+DLR LSS+TK++ ++ NE FR+++F
Sbjct: 247 HMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKF 306
Query: 237 IIRMSRDTLSLLKRHLQEKKHTVLLNIVQEHLYFDMYEG-----------------EATR 279
++R+SRD+ LLKRHLQEK++ + NIVQEHLY D+++G EA R
Sbjct: 307 VLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKR 366
Query: 280 QDNKAKIYYGMPREPDLQNTIAVXXXXXXXXXXXXXXXXXXXXXXXSMFSKKTKSDPNAP 339
+ NK+K+++G+ +EP+++ + S+ SK K DPNAP
Sbjct: 367 EANKSKVFFGLLKEPEIEVPL---DDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDPNAP 423
Query: 340 PVDRIPLPPLKDSEKIDKLKALREATKRVTLGPESLPSIACYTLLNARQQVTCAEISEDV 399
P +RIPLP LKDS+K+DK+ ++E TKRV LGP+ LPSI YT LNA Q +T ++++D
Sbjct: 424 PQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDDS 483
Query: 400 SILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGH 459
S++A GF++S +++WS+ P+KL+++K + L I+ E DD+L RIMDE+ A + L GH
Sbjct: 484 SLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGH 543
Query: 460 EGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFAS 519
GPV SFSPDR+ LLS S+D T+RLWSL + CLV YKGH +PVWD +FSP+GYYF S
Sbjct: 544 SGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS 603
Query: 520 AGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHV 579
GHDR+ARLWATD Y PLR+F GH +DV+C +FHPNSNYVATGS+DRT+RLWD + G+ V
Sbjct: 604 GGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCV 663
Query: 580 RLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRD 639
R+ TGHK P+++L+FS GRFLA+ DG V +WD+ + D V +L FSRD
Sbjct: 664 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRD 723
Query: 640 GNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHS-ADIKNSSLAYLVRSYKTKASPLLH 698
G ILAS D +V+LWD K +++ T++ + ++ +S L+ +Y TK++P++H
Sbjct: 724 GEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPVVH 783
Query: 699 LIFSRRNILL 708
L F+RRN++L
Sbjct: 784 LHFTRRNLVL 793
Score = 81 (33.6 bits), Expect = 2.9e-159, Sum P(2) = 2.9e-159
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 74 PPPSQTSKQSGKAPDKNTLITMLKLLRQYNLRGTEEQLKKE 114
P P+ + ++G D+ TL+ +L+ LRQ NLR EE L++E
Sbjct: 81 PVPA-AAPEAGAPHDRQTLLAVLQFLRQSNLREAEEALRRE 120
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 1490 (529.6 bits), Expect = 6.0e-159, Sum P(2) = 6.0e-159
Identities = 284/599 (47%), Positives = 403/599 (67%)
Query: 128 EIGDLLSAYESEGDPNLYEDAYQDLKKFIENSLDVYKYELGLVLYPVLVHMYIELVYNGH 187
++ +LSAY +GDP +YE+ Y LK FIE SLD ++ EL + YP+ VHMY+ELVYN H
Sbjct: 195 DVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQH 254
Query: 188 EHQATEMLHKHLMDHEPHYQEDLRKLSSVTKRDQIRTNEIAETFRSTEFIIRMSRDTLSL 247
E +A K D E +YQ+DLR LSS+TK++ ++ NE FR+++F++R+SRD+ L
Sbjct: 255 ESEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQL 314
Query: 248 LKRHLQEKKHTVLLNIVQEHLYFDMYEG-----------------EATRQDNKAKIYYGM 290
LKRHLQEK++ + NIVQEHLY D+++G EA R+ NK+K+++G+
Sbjct: 315 LKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKSKVFFGL 374
Query: 291 PREPDLQNTIAVXXXXXXXXXXXXXXXXXXXXXXXSMFSKKTKSDPNAPPVDRIPLPPLK 350
+EP+++ + S+ SK K DPNAPP +RIPLP LK
Sbjct: 375 LKEPEIEVPL---DDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDPNAPPQNRIPLPELK 431
Query: 351 DSEKIDKLKALREATKRVTLGPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESY 410
DS+K+DK+ ++E TKRV LGP+ LPSI YT LNA Q +T ++++D S++A GF++S
Sbjct: 432 DSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDDSSLIAGGFADST 491
Query: 411 IKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSP 470
+++WS+ P+KL+++K + L I+ E DD+L RIMDE+ A + L GH GPV SFSP
Sbjct: 492 VRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSP 551
Query: 471 DRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWA 530
DR+ LLS S+D T+RLWSL + CLV YKGH +PVWD +FSP+GYYF S GHDR+ARLWA
Sbjct: 552 DRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWA 611
Query: 531 TDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVY 590
TD Y PLR+F GH +DV+C +FHPNSNYVATGS+DRT+RLWD + G+ VR+ TGHK P++
Sbjct: 612 TDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIH 671
Query: 591 ALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDC 650
+L+FS GRFLA+ DG V +WD+ + D V +L FSRDG ILAS D
Sbjct: 672 SLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDN 731
Query: 651 SVKLWDFAKLSDEVGTEEVNLSHS-ADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILL 708
+V+LWD K +++ T++ + ++ +S L+ +Y TK++P++HL F+RRN++L
Sbjct: 732 TVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPVVHLHFTRRNLVL 790
Score = 80 (33.2 bits), Expect = 6.0e-159, Sum P(2) = 6.0e-159
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 74 PPPSQTSKQSGKAPDKNTLITMLKLLRQYNLRGTEEQLKKE 114
P P+ + ++G D+ TL+ +L+ LRQ NLR EE L++E
Sbjct: 78 PVPAAPA-EAGAPHDRQTLLAVLQFLRQSNLREAEEALRRE 117
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 1493 (530.6 bits), Expect = 1.6e-158, Sum P(2) = 1.6e-158
Identities = 285/610 (46%), Positives = 409/610 (67%)
Query: 117 VNDLGIDPNDSEIGDLLSAYESEGDPNLYEDAYQDLKKFIENSLDVYKYELGLVLYPVLV 176
V + ++ + ++ +LSAY +GDP +YE+ Y LK FIE SLD ++ EL + YP+ V
Sbjct: 187 VGSVAVE-DQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLFYPLFV 245
Query: 177 HMYIELVYNGHEHQATEMLHKHLMDHEPHYQEDLRKLSSVTKRDQIRTNEIAETFRSTEF 236
HMY+ELVYN HE++A K D E +YQ+DLR LSS+TK++ ++ NE FR+++F
Sbjct: 246 HMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKF 305
Query: 237 IIRMSRDTLSLLKRHLQEKKHTVLLNIVQEHLYFDMYEG-----------------EATR 279
++R+SRD+ LLKRHLQEK++ + NIVQEHLY D+++G EA R
Sbjct: 306 VLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKR 365
Query: 280 QDNKAKIYYGMPREPDLQNTIAVXXXXXXXXXXXXXXXXXXXXXXXSMFSKKTKSDPNAP 339
+ NK+K+++G+ +EP+++ + S+ SK K DPNAP
Sbjct: 366 EANKSKVFFGLLKEPEIEVPL---DDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDPNAP 422
Query: 340 PVDRIPLPPLKDSEKIDKLKALREATKRVTLGPESLPSIACYTLLNARQQVTCAEISEDV 399
P +RIPLP LKDS+K+DK+ ++E TKRV LGP+ LPSI YT LNA Q +T ++++D
Sbjct: 423 PQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDDS 482
Query: 400 SILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGH 459
S++A GF++S +++WS+ P+KL+++K + L I+ E DD+L RIMDE+ A + L GH
Sbjct: 483 SLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGH 542
Query: 460 EGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFAS 519
GPV SFSPDR+ LLS S+D T+RLWSL + CLV YKGH +PVWD +FSP+GYYF S
Sbjct: 543 SGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS 602
Query: 520 AGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHV 579
GHDR+ARLWATD Y PLR+F GH +DV+C +FHPNSNYVATGS+DRT+RLWD + G+ V
Sbjct: 603 GGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCV 662
Query: 580 RLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRD 639
R+ TGHK P+++L+FS GRFLA+ DG V +WD+ + D V +L FSRD
Sbjct: 663 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRD 722
Query: 640 GNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHS-ADIKNSSLAYLVRSYKTKASPLLH 698
G ILAS D +V+LWD K +++ T++ + ++ +S L+ +Y TK++P++H
Sbjct: 723 GEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPVVH 782
Query: 699 LIFSRRNILL 708
L F+RRN++L
Sbjct: 783 LHFTRRNLVL 792
Score = 73 (30.8 bits), Expect = 1.6e-158, Sum P(2) = 1.6e-158
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 74 PPPSQTSKQSGKAPDKNTLITMLKLLRQYNLRGTEEQLKKE 114
P P+ + +G D+ TL+ +L+ LRQ LR EE L++E
Sbjct: 80 PVPA-AAPDAGAPHDRQTLLAVLQFLRQSKLREAEEALRRE 119
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 1484 (527.5 bits), Expect = 2.6e-158, Sum P(2) = 2.6e-158
Identities = 282/599 (47%), Positives = 403/599 (67%)
Query: 128 EIGDLLSAYESEGDPNLYEDAYQDLKKFIENSLDVYKYELGLVLYPVLVHMYIELVYNGH 187
++ +LSAY +GDP +YE+ Y LK FIE SLD ++ EL + YP+ VHMY+ELVYN H
Sbjct: 198 DVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQH 257
Query: 188 EHQATEMLHKHLMDHEPHYQEDLRKLSSVTKRDQIRTNEIAETFRSTEFIIRMSRDTLSL 247
E++A K D E +YQ+DLR LSS+TK++ ++ NE FR+++F++R+ RD+ L
Sbjct: 258 ENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRIYRDSYQL 317
Query: 248 LKRHLQEKKHTVLLNIVQEHLYFDMYEG-----------------EATRQDNKAKIYYGM 290
LKRHLQEK++ + NIVQEHLY D+++G EA R+ NK+K+++G+
Sbjct: 318 LKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKSKVFFGL 377
Query: 291 PREPDLQNTIAVXXXXXXXXXXXXXXXXXXXXXXXSMFSKKTKSDPNAPPVDRIPLPPLK 350
+EP+++ + S+ SK K DPNAPP +RIPLP LK
Sbjct: 378 LKEPEIEVPL---DDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDPNAPPQNRIPLPELK 434
Query: 351 DSEKIDKLKALREATKRVTLGPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESY 410
DS+K+DK+ ++E TKRV LGP+ LPSI YT LNA Q +T ++++D S++A GF++S
Sbjct: 435 DSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDDSSLIAGGFADST 494
Query: 411 IKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSP 470
+++WS+ P+KL+++K + L I+ E DD+L RIMDE+ A + L GH GPV SFSP
Sbjct: 495 VRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSP 554
Query: 471 DRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWA 530
DR+ LLS S+D T+RLWSL + CLV YKGH +PVWD +FSP+GYYF S GHDR+ARLWA
Sbjct: 555 DRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWA 614
Query: 531 TDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVY 590
TD Y PLR+F GH +DV+C ++HPNSNYVATGS+DRT+RLWD + G+ VR+ TGHK P++
Sbjct: 615 TDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIH 674
Query: 591 ALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDC 650
+L+FS GRFLA+ DG V +WD+ + D V +L FSRDG ILAS D
Sbjct: 675 SLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDN 734
Query: 651 SVKLWDFAKLSDEVGTEEVNLSHS-ADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILL 708
+V+LWD K +++ T++ + ++ +S L+ +Y TK++P++HL F+RRN++L
Sbjct: 735 TVRLWDAVKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPVVHLHFTRRNLVL 793
Score = 80 (33.2 bits), Expect = 2.6e-158, Sum P(2) = 2.6e-158
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 74 PPPSQTSKQSGKAPDKNTLITMLKLLRQYNLRGTEEQLKKE 114
P P+ + ++G D+ TL+ +L+ LRQ NLR EE L++E
Sbjct: 81 PVPAAPA-EAGAPHDRQTLLAVLQFLRQSNLREAEEALRRE 120
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 1467 (521.5 bits), Expect = 2.4e-153, Sum P(2) = 2.4e-153
Identities = 281/599 (46%), Positives = 399/599 (66%)
Query: 128 EIGDLLSAYESEGDPNLYEDAYQDLKKFIENSLDVYKYELGLVLYPVLVHMYIELVYNGH 187
++ +LSAY +GDP+LY+ Y DLKKFIE+ LD ++ EL + YP+ VHMY+ELVYN H
Sbjct: 153 DVSVVLSAYSQQGDPSLYKVYYSDLKKFIESVLDCHRAELSQLFYPLFVHMYLELVYNNH 212
Query: 188 EHQATEMLHKHLMDHEPHYQEDLRKLSSVTKRDQIRTNEIAETFRSTEFIIRMSRDTLSL 247
E +A K D E +Y++DLR L +TK++ ++ NE FR++ F++R+SRD+ L
Sbjct: 213 ESEAKAFFDKFSGDQECYYEDDLRVLCGLTKKEHMKGNEALLDFRTSRFVLRISRDSYQL 272
Query: 248 LKRHLQEKKHTVLLNIVQEHLYFDMYEG-----------------EATRQDNKAKIYYGM 290
LKRHLQE+++ + NI+QEHLY D+++G EA R+ NK K++YG+
Sbjct: 273 LKRHLQERQNNQIWNIIQEHLYIDIFDGMPRSKSQIDSMSGSLAGEARREVNKVKVFYGL 332
Query: 291 PREPDLQNTIAVXXXXXXXXXXXXXXXXXXXXXXXSMFSKKTKSDPNAPPVDRIPLPPLK 350
+EP+++ + SM SK K DPNAP +RIPLP LK
Sbjct: 333 LKEPEIEVPL---DDEDEEAENEEGKPKKKKTKKDSMGSKSKKQDPNAPQQNRIPLPELK 389
Query: 351 DSEKIDKLKALREATKRVTLGPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESY 410
DS+K+DK+ ++E+TKR+ LGPE+LPSI YT LNA Q +T + ++D S++A GF++S
Sbjct: 390 DSDKLDKIMYMKESTKRIRLGPETLPSICFYTFLNAYQGLTAVDFTDDSSLIAGGFADST 449
Query: 411 IKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSP 470
+++WS+ P+KL+ +KS+ L I+ E DD+L RIMDE+ + ++ L GH GPV +SFSP
Sbjct: 450 VRVWSVTPKKLRKVKSAADLNLIDKESDDVLERIMDEKTSSESKILHGHSGPVYGVSFSP 509
Query: 471 DRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWA 530
DR+ LLS S+D TIRLWSL + CLV YKGH +PVWD +FSP GYYF S GHDR+ARLWA
Sbjct: 510 DRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWA 569
Query: 531 TDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVY 590
TD Y PLR+F GH +DV C +FHPNSNYVATGSSDRT+RLWD + G+ VR+ TGHK P++
Sbjct: 570 TDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIH 629
Query: 591 ALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDC 650
+L+FS G+FLAS DG V +WD+ + + AL FSRDG I+AS D
Sbjct: 630 SLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDN 689
Query: 651 SVKLWDFAKLSDEVGTEEVNLSHS-ADIKNSSLAYLVRSYKTKASPLLHLIFSRRNILL 708
+V+LWD + D+V T++ + + ++S L+ +Y +K++ ++HL F+RRN+LL
Sbjct: 690 TVRLWDVMRAIDDVETDDFTAATGHIHLPDNSQELLLGTYHSKSTAVIHLHFTRRNLLL 748
Score = 50 (22.7 bits), Expect = 2.4e-153, Sum P(2) = 2.4e-153
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 85 KAPDKNTLITMLKLLRQYNLRGTEEQLKKEINV--------NDLGIDPNDSEIGD 131
K D+ TL+ +L+ L++ L + E L++E + D G D + GD
Sbjct: 66 KPEDQQTLLAVLQFLKRSKLAESVEILRREAGLAEELEDSHTDAGAGGKDGDAGD 120
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 1073 (382.8 bits), Expect = 1.7e-139, Sum P(2) = 1.7e-139
Identities = 201/384 (52%), Positives = 273/384 (71%)
Query: 326 SMFSKKTKSDPNAPPVDRIPLPPLKDSEKIDKLKALREATKRVTLGPESLPSIACYTLLN 385
+M SK K DPNAPP +RIPLP LKDS+K+DK+ ++E TKRV LGP+ LPSI YT LN
Sbjct: 168 AMGSKSKKQDPNAPPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLN 227
Query: 386 ARQQ-VTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRI 444
A QQ +T ++++D S++A GF++S +++WS+ P+KL+++K + L I+ E DD+L RI
Sbjct: 228 AYQQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERI 287
Query: 445 MDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHP 504
MDE+ A + L GH GPV SFSPDR+ LLS S+D T+RLWSL + CLV YKGH +P
Sbjct: 288 MDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYP 347
Query: 505 VWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSS 564
VWD +FSP+GYYF S GHDR+ARLWATD Y PLR+F GH +DV+C +FHPNSNYVATGS+
Sbjct: 348 VWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSA 407
Query: 565 DRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXX 624
DRT+RLWD + G+ VR+ TGHK P+++L+FS GRFLA+ DG V +WD+ +
Sbjct: 408 DRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGEL 467
Query: 625 XXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAY 684
D V +L FSRDG ILAS D +V+LWD K +++ T+ +S
Sbjct: 468 KGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDLETD------------NSQEL 515
Query: 685 LVRSYKTKASPLLHLIFSRRNILL 708
L+ +Y TK++P++HL F+RRN++L
Sbjct: 516 LLGTYMTKSTPVVHLHFTRRNLVL 539
Score = 313 (115.2 bits), Expect = 1.7e-139, Sum P(2) = 1.7e-139
Identities = 67/153 (43%), Positives = 95/153 (62%)
Query: 128 EIGDLLSAYESEGDPNLYEDAYQDLKKFIENSLDVYKYELGLVLYPVLVHMYIELVYNGH 187
++ +LSAY +GDP +YE+ Y LK FIE SLD ++ EL + YP+ VHMY+ELVYN H
Sbjct: 9 DVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQH 68
Query: 188 EHQATEMLHKHLMD-----HEPHYQEDLRKLSSVTKRDQIRTNEIAETFRSTEFIIRMSR 242
E++A K+ H + L K S+ D + I RS +F++R+SR
Sbjct: 69 ENEAKSFFEKYHTSFLKAAHSSLFFMSLTKTMSLL--DFLFFFLILSLLRS-KFVLRISR 125
Query: 243 DTLSLLKRHLQEKKHTVLLNIVQEHLYFDMYEG 275
D+ LLKRHLQEK++ + NIVQEHLY D+++G
Sbjct: 126 DSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDG 158
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 655 (235.6 bits), Expect = 9.5e-106, Sum P(4) = 9.5e-106
Identities = 127/273 (46%), Positives = 172/273 (63%)
Query: 443 RIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHG 502
++ ++ +T +GH GPV SFSPD LLSCS+D T RLWS+ LV YKGH
Sbjct: 662 KLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHN 721
Query: 503 HPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATG 562
PVWD+ FSP G+YFA+A HDR ARLW T+ PLR+F GH SD + V+FHPN NY+ATG
Sbjct: 722 FPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATG 781
Query: 563 SSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXX 622
S+D++ RLW+ TG VR+ GH+AP+Y ++FS GR LA+AG D +V +WDLS
Sbjct: 782 SNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVK 841
Query: 623 XXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAK-LSDEVGTEEVNLSHSADIKNSS 681
V +L FS DG+ILAS DC+V+LWD K + + T+ +L + K +
Sbjct: 842 KMDGHTKCVYSLDFSCDGSILASGSSDCTVRLWDVKKAFNSSLSTQPSSLINDESRKRKT 901
Query: 682 LAY------LVRSYKTKASPLLHLIFSRRNILL 708
L L+ +Y TK +P+ ++ FSRRN+LL
Sbjct: 902 LKSKLFSDELLETYPTKQTPVYNVCFSRRNLLL 934
Score = 278 (102.9 bits), Expect = 5.6e-53, Sum P(4) = 5.6e-53
Identities = 64/185 (34%), Positives = 94/185 (50%)
Query: 435 MEC-DDILVRIMDERNAETTRTLV---GHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL 490
+ C +D R+ + ET LV GH PV +SFSP + S D T RLW+
Sbjct: 695 LSCSEDTTARLW---SMETMSNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTTN 751
Query: 491 LWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCV 550
L ++ GH ++F P+ Y A+ +D+ ARLW + +R+F+GH + + V
Sbjct: 752 HISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTV 811
Query: 551 QFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNV 610
F P+ +AT D ++ LWD TG V+ + GH VY+L FS G LAS D V
Sbjct: 812 AFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFSCDGSILASGSSDCTV 871
Query: 611 HMWDL 615
+WD+
Sbjct: 872 RLWDV 876
Score = 258 (95.9 bits), Expect = 9.5e-106, Sum P(4) = 9.5e-106
Identities = 55/171 (32%), Positives = 95/171 (55%)
Query: 107 TEEQLKKEINVNDLGIDPNDSEIGDLLSAYES--EGD---PNLYEDAYQDLKKFIENSLD 161
T Q ++LG +D E+ L Y S +GD P Y + Y+ L +I +SLD
Sbjct: 238 TTNQTNINTVTDNLG-SSDDQELAQYLHMYNSSNKGDTSNPQNYLEQYKKLGNWIHSSLD 296
Query: 162 VYKYELGLVLYPVLVHMYIELVYNGHEHQATEMLHKHLMDHEPHYQEDLRKLSSVTKRDQ 221
+YK EL +LYPV VH YI+L+ G+ QA E++ K DHE ++ +DL+ L ++ D
Sbjct: 297 IYKNELLSILYPVFVHSYIDLITKGYPQQARELMEKIGPDHEEYFGDDLKLLRGISNTDH 356
Query: 222 IRTNEIAETFRSTEFIIRMSRDTLSLLKRHLQEKKHTVLLNIVQEHLYFDM 272
++ NE+ + FR+ + I+M + LL L + +LL ++ ++++ ++
Sbjct: 357 LKENELVDLFRNNRWNIKMCAYSFELLMSFLHQSNFILLLGLINQYIHINV 407
Score = 148 (57.2 bits), Expect = 9.5e-106, Sum P(4) = 9.5e-106
Identities = 33/108 (30%), Positives = 59/108 (54%)
Query: 330 KKTKSDPNAPPVD-RIPLPPLKDSEKIDKLKALREATKRVTLGPESLPSIACYTLLNARQ 388
KK D ++ +P+P L +E+ + + + + TK V+L LPSI YT+ N Q
Sbjct: 503 KKEVKDERMSKIESNVPIPNL--TERFEN-ELMEDFTKCVSLSSSHLPSICFYTIFNTYQ 559
Query: 389 QVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEME 436
+ +IS+D ++A GFS+S +K+W+L K + ++ Q Q + +
Sbjct: 560 GLNTTDISKDAQLVAGGFSDSSVKIWNLKEMKEQRLQQQQQQQQQQQQ 607
Score = 99 (39.9 bits), Expect = 3.1e-34, Sum P(4) = 3.1e-34
Identities = 26/100 (26%), Positives = 41/100 (41%)
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
+N + +GSS + +L S + GH PVY SFS ++L S D +W +
Sbjct: 649 NNNLNSGSSSSSNKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSM 708
Query: 616 SNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
V + FS G A++ D + +LW
Sbjct: 709 ETMSNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLW 748
Score = 65 (27.9 bits), Expect = 1.9e-21, Sum P(4) = 1.9e-21
Identities = 29/94 (30%), Positives = 44/94 (46%)
Query: 394 EISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVR-IMDER--NA 450
+ S D SILA G S+ ++LW + KA SS Q + D+ R + + +
Sbjct: 854 DFSCDGSILASGSSDCTVRLWDVK----KAFNSSLSTQPSSLINDESRKRKTLKSKLFSD 909
Query: 451 ETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTI 484
E T + PV + FS R+LLL+ NT+
Sbjct: 910 ELLETYPTKQTPVYNVCFSR-RNLLLASGAFNTL 942
Score = 57 (25.1 bits), Expect = 3.2e-96, Sum P(4) = 3.2e-96
Identities = 17/37 (45%), Positives = 19/37 (51%)
Query: 334 SDPNAP--PVDRIPLPPLKDSEKIDKLKALREATKRV 368
+DPNAP PV P PP S I KLK + K V
Sbjct: 470 TDPNAPLPPVVAPPPPPPPTSGYIPKLKKKDKKKKEV 506
Score = 54 (24.1 bits), Expect = 2.5e-20, Sum P(4) = 2.5e-20
Identities = 8/27 (29%), Positives = 17/27 (62%)
Query: 637 SRDGNILASSGQDCSVKLWDFAKLSDE 663
S+D ++A D SVK+W+ ++ ++
Sbjct: 567 SKDAQLVAGGFSDSSVKIWNLKEMKEQ 593
Score = 45 (20.9 bits), Expect = 2.0e-19, Sum P(4) = 2.0e-19
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 544 YSDVDCVQFHPNSNYVATGSSDRTIRLWD 572
Y ++ ++ VA G SD ++++W+
Sbjct: 558 YQGLNTTDISKDAQLVAGGFSDSSVKIWN 586
Score = 39 (18.8 bits), Expect = 9.5e-106, Sum P(4) = 9.5e-106
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 73 TPPPSQTSKQSGKAPDKNTLITML 96
TP P+ TS S P T T +
Sbjct: 76 TPNPNTTSSISTSTPTPTTTTTTI 99
Score = 38 (18.4 bits), Expect = 5.5e-25, Sum P(5) = 5.5e-25
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 469 SPDRSLLLSCSQDNTIRLWSL 489
S D L+ D+++++W+L
Sbjct: 567 SKDAQLVAGGFSDSSVKIWNL 587
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 725 (260.3 bits), Expect = 4.2e-98, Sum P(2) = 4.2e-98
Identities = 160/371 (43%), Positives = 217/371 (58%)
Query: 338 APPVD-RIPLPPLKDSEKIDKLKALREATKRVTLGPESLPSIACYTLLNARQQVTCAEIS 396
AP V + LP + + L+ LR RV L ++PS++ YT +N + C+ IS
Sbjct: 305 APRVKPELALPVMSTDVEQSILEDLRN---RVQLSSVAMPSVSFYTFVNTHNGLNCSSIS 361
Query: 397 EDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTL 456
D S++A GFS+S IK+W + K+ S LQ E + D + + R + T L
Sbjct: 362 HDGSLVAGGFSDSSIKVWDMA--KI-GQAGSGALQ-AENDSSDQSIG-PNGRRSYTL--L 414
Query: 457 VGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYY 516
+GH GPV +FSP +LS S D TIRLWS L LV YKGH +PVWD +FSP G+Y
Sbjct: 415 LGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHY 474
Query: 517 FASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTG 576
FAS HDR AR+W+ D PLR+ GH SDVDCVQ+HPN NY+ATGSSD+T+RLWD TG
Sbjct: 475 FASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTG 534
Query: 577 SHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCF 636
VR+ GH++ V +L+ S GR++AS DG + MWDLS V +L +
Sbjct: 535 ECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSY 594
Query: 637 SRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPL 696
S +G++LAS DC+VKLWD + EE N NS+ +R++ TK++P+
Sbjct: 595 SGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKN-------GNSNRLRSLRTFPTKSTPV 647
Query: 697 LHLIFSRRNIL 707
L FSRRN+L
Sbjct: 648 HALRFSRRNLL 658
Score = 269 (99.8 bits), Expect = 4.2e-98, Sum P(2) = 4.2e-98
Identities = 53/155 (34%), Positives = 86/155 (55%)
Query: 125 NDSEIGDLLSAY-ESEGDPNLYEDAYQDLKKFIENSLDVYKYELGLVLYPVLVHMYIELV 183
ND E+ L+ ++ + E DP Y + Y L+ + NSLD+YK+EL V+YPV +H Y++LV
Sbjct: 46 NDPELTKLIRSFSQQEDDPTRYREGYSKLRSWAYNSLDLYKHELLRVMYPVFIHCYMDLV 105
Query: 184 YNGHEHQATEMLHKHLMDHEPHYQEDLRKLSSVTKRDQIRTNEIAETFRSTEFIIRMSRD 243
GH +A + DHE + DL+KL V + E A + R ++ I+ +
Sbjct: 106 GKGHTQEARAFFNSFRKDHEMVHLRDLQKLEGVLSPSHLEEMEFARSLRKSKVNIKFCQY 165
Query: 244 TLSLLKRHLQEKKHTVLLNIVQEHLYFDMYEGEAT 278
+ LL ++L T++L I+ EH+ F +Y G+ T
Sbjct: 166 SYELLLQYLHSTVSTLMLGIINEHINFQVYSGQPT 200
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 620 (223.3 bits), Expect = 6.2e-98, Sum P(3) = 6.2e-98
Identities = 117/218 (53%), Positives = 147/218 (67%)
Query: 451 ETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKF 510
E TR L+GH GPV +SFSPD LLSCS+D T+RLWSL + LV YKGH PVWD+KF
Sbjct: 508 ENTRKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKF 567
Query: 511 SPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRL 570
SP G+YF +A HD+ ARLWATD +PLR+F GH +DVDCV+FHPNSNYV TGSSD+T R+
Sbjct: 568 SPLGHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRM 627
Query: 571 WDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDL-SNXXXXXXXXXXXD 629
WD TG+ VR+ GH V L+ S GR+LAS G DG + +WD+ S
Sbjct: 628 WDVHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARA 687
Query: 630 VVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTE 667
+ +L FSRDG +L S D SV++WD K +++ G E
Sbjct: 688 SLYSLAFSRDGTVLVSGCADNSVRVWDVKKNTNDAGPE 725
Score = 240 (89.5 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
Identities = 63/205 (30%), Positives = 90/205 (43%)
Query: 466 LSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYK--------------GHGHPVWDIKFS 511
+ F+ D +L+ + QD+ I+LWSL V K GH PV+ + FS
Sbjct: 467 IEFNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIGHSGPVYGVSFS 526
Query: 512 PHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLW 571
P Y S D+ RLW+ D+Y L + GH V V+F P +Y T S D+T RLW
Sbjct: 527 PDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARLW 586
Query: 572 DCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVV 631
+R+ GH V + F ++ + D MWD+ + V
Sbjct: 587 ATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSV 646
Query: 632 RALCFSRDGNILASSGQDCSVKLWD 656
L S DG LAS G+D + +WD
Sbjct: 647 NCLAVSPDGRWLASGGEDGIICVWD 671
Score = 199 (75.1 bits), Expect = 6.2e-98, Sum P(3) = 6.2e-98
Identities = 50/205 (24%), Positives = 106/205 (51%)
Query: 73 TPPPSQTSKQSGKAPDKNTLITMLKLLRQYN-LRGTEEQLKKEIN-VNDLGI----DPND 126
TP ++ + + +K+ + K ++ LR + +++KE+ D + +
Sbjct: 116 TPATTELASVNEIGDNKDLKEKLTKAEQELKELRDKQSKIEKELREAKDREVKISKEKEL 175
Query: 127 SEIGDLLSAYESEGDPNLYEDAYQDLKKFIENSLDVYKYELGLVLYPVLVHMYIELVYNG 186
++ +L + E DP +Y AY L++++ +SLD+YK EL VLYP+ +H ++EL+ G
Sbjct: 176 KQLKELEKKTKRESDPEIYFTAYSMLRRWVGSSLDLYKPELSRVLYPLYIHCFLELISKG 235
Query: 187 HEHQATEMLHKHLMDHEPHYQEDLRKLSSVTKRDQIRTNEIAETFRSTEFIIRMSRDTLS 246
+A K DH + ++ K + ++ + + N++A +R ++ I +S+ +L+
Sbjct: 236 FSSEAKLFFDKFRSDHLVLHGIEVEKFAGLSLPEHLEENDLAVAYRKYKYRILVSKTSLN 295
Query: 247 LLKRHLQEKKHT---VLLNIVQEHL 268
LL L E + +L+ I+ ++L
Sbjct: 296 LLIYFLHENEAVGGGILIRIINQYL 320
Score = 187 (70.9 bits), Expect = 6.2e-98, Sum P(3) = 6.2e-98
Identities = 40/105 (38%), Positives = 63/105 (60%)
Query: 328 FSKKTKSDPNAPPVDRIPLPPLKDSEKIDKLKA-LREATKRVTLGP--ESLPSIACYTLL 384
F TK D ++P + +PLP LKD+ I K+ + ++ ++ LG SLPS+ YT
Sbjct: 400 FQDMTKPDQDSPVRESLPLP-LKDANDIKKMIIQVEDSRSKIKLGAIQASLPSVCMYTFH 458
Query: 385 NARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQ 429
N +TC E ++D +++A GF +SYIKLWSL + LK++ D+
Sbjct: 459 NTNNNMTCIEFNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDR 503
Score = 152 (58.6 bits), Expect = 5.7e-23, Sum P(2) = 5.7e-23
Identities = 58/277 (20%), Positives = 118/277 (42%)
Query: 406 FSESYIKLWSLV--PQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPV 463
F+E +KL L P K +++ +++D ++E + + + + + T+ + PV
Sbjct: 357 FNEQNVKLGKLPIDPDVAKEVEAELKIKDEKIE--PVNNKTLTKEFQDMTKP--DQDSPV 412
Query: 464 RK-----LSFSPD-RSLLLSCSQDNT-IRLWSL---LLWRCLVVYKGHGHPVWDIKFSPH 513
R+ L + D + +++ + I+L ++ L C+ + + + I+F+
Sbjct: 413 RESLPLPLKDANDIKKMIIQVEDSRSKIKLGAIQASLPSVCMYTFHNTNNNMTCIEFNDD 472
Query: 514 GYYFASAGHDRMARLWATDS-----------YHP---LRLFVGHYSDVDCVQFHPNSNYV 559
A+ D +LW+ D + P R +GH V V F P++ Y+
Sbjct: 473 STLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIGHSGPVYGVSFSPDNKYL 532
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXX 619
+ S D+T+RLW T + + GH PV+ + FS G + +A D +W +
Sbjct: 533 LSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARLWATDHIY 592
Query: 620 XXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ V + F + N + + D + ++WD
Sbjct: 593 PLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWD 629
Score = 104 (41.7 bits), Expect = 9.2e-33, Sum P(3) = 9.2e-33
Identities = 27/92 (29%), Positives = 38/92 (41%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D R+ D R +GH V L+ SPD L S +D I +W + R L
Sbjct: 622 DKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSM 681
Query: 499 KGHGHP-VWDIKFSPHGYYFASAGHDRMARLW 529
+GH ++ + FS G S D R+W
Sbjct: 682 RGHARASLYSLAFSRDGTVLVSGCADNSVRVW 713
Score = 70 (29.7 bits), Expect = 3.1e-29, Sum P(3) = 3.1e-29
Identities = 14/53 (26%), Positives = 31/53 (58%)
Query: 438 DDILVRIMDERNAETTRTLVGH-EGPVRKLSFSPDRSLLLSCSQDNTIRLWSL 489
+D ++ + D + +++ GH + L+FS D ++L+S DN++R+W +
Sbjct: 663 EDGIICVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVLVSGCADNSVRVWDV 715
Score = 49 (22.3 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 384 LNARQQVTCAEISEDVSILAVGFSESYIKLWSLVP-QKLKAMK 425
L V C +S D LA G + I +W + ++LK+M+
Sbjct: 640 LGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMR 682
Score = 42 (19.8 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 7/32 (21%), Positives = 18/32 (56%)
Query: 385 NARQQVTCAEISEDVSILAVGFSESYIKLWSL 416
+AR + S D ++L G +++ +++W +
Sbjct: 684 HARASLYSLAFSRDGTVLVSGCADNSVRVWDV 715
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 708 (254.3 bits), Expect = 3.0e-94, Sum P(3) = 3.0e-94
Identities = 154/368 (41%), Positives = 216/368 (58%)
Query: 330 KKTKSDPNAPPVDRIPLPP---LKDSEKIDKLKALREATKRVTLGPESLPSIACYTLLNA 386
+K S+ ++P D +PLPP L +I K+K R+A K L +LPS+ YT N
Sbjct: 407 EKKDSNLSSPARDILPLPPKTALDLKLEIQKVKESRDAIKLDNL-QLALPSVCMYTFQNT 465
Query: 387 RQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMD 446
+ ++C + S+D I A GF +SYIK+WSL L +I + +D D
Sbjct: 466 NKDMSCLDFSDDCRIAAAGFQDSYIKIWSLDGSSLNN-------PNIALNNND-----KD 513
Query: 447 ERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVW 506
E T +TLVGH G V SFSPD LLS S+D T+RLWS+ LV YKGH HPVW
Sbjct: 514 ED--PTCKTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVW 571
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
D+ FSP G+YFA+A HD+ ARLW+ D +PLR+F GH +DVDCV FHPN YV TGSSD+
Sbjct: 572 DVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDK 631
Query: 567 TIRLWDCVTGSHVRLLTGHKAPVYALSFSVC--GRFLASAGGDGNVHMWDL-SNXXXXXX 623
T R+WD TG VRL GH APV +S +VC GR+L++ DG +++WD+ +
Sbjct: 632 TCRMWDVSTGDSVRLFLGHTAPV--ISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQM 689
Query: 624 XXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTE--EVNLSHSADIKNSS 681
+ + +L +S++GN+L S G D +V++WD K + E E E + + D+ +S
Sbjct: 690 RGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLKKATTEPSAEPDEPFIGYLGDV-TAS 748
Query: 682 LAYLVRSY 689
+ ++ Y
Sbjct: 749 INQDIKEY 756
Score = 206 (77.6 bits), Expect = 3.0e-94, Sum P(3) = 3.0e-94
Identities = 47/160 (29%), Positives = 91/160 (56%)
Query: 126 DSEIGDLLSAYESEG--DPNLYEDAYQDLKKFIENSLDVYKYELGLVLYPVLVHMYIELV 183
D+E G ++S+ EG P Y AY LK ++++SL++YK EL ++YP+ +++++ LV
Sbjct: 132 DAE-GGIVSSGRLEGLNAPENYIRAYSMLKNWVDSSLEIYKPELSYIMYPIFIYLFLNLV 190
Query: 184 YNGHEHQATEMLHKHLMDHEPHYQEDLRKLSSVTKRDQIRTNEIAETFRSTEFIIRMSRD 243
+ A + D + + ++ +L SV D I+ NE+A F+S ++ I MS+
Sbjct: 191 AKNPVY-ARRFFDRFSPDFKDFHGSEINRLFSVNSIDHIKENEVASAFQSHKYRITMSKT 249
Query: 244 TLSLLKRHLQEKKH---TVLLNIVQEHLYFDMYEGEATRQ 280
TL+LL L E + +++++++ +HL ++ E R+
Sbjct: 250 TLNLLLYFLNENESIGGSLIISVINQHLDPNIVESVTARE 289
Score = 57 (25.1 bits), Expect = 3.0e-94, Sum P(3) = 3.0e-94
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 685 LVRSYKTKASPLLHLIFSRRNILLRG 710
LV S+ TK +P+ + FSR N+ L G
Sbjct: 768 LVASFYTKKTPVFKVKFSRSNLALAG 793
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 566 (204.3 bits), Expect = 6.1e-92, Sum P(3) = 6.1e-92
Identities = 116/265 (43%), Positives = 156/265 (58%)
Query: 456 LVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGY 515
L+ H GPV +FSPD LLSCS+D + RLWS+ LV YKGH PVWD+ F P G+
Sbjct: 375 LLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGH 434
Query: 516 YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT 575
YFA+A HD+ A+LW+ D +PLR+F GH SDVDCV FHPNS YV TGSSD+T RLWD
Sbjct: 435 YFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHR 494
Query: 576 GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALC 635
G VR+ GH PV A++ + G +ASA +G +H+WD+ + +L
Sbjct: 495 GHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLS 554
Query: 636 FSRDGNILASSGQDCSVKLWDFAKLS--DEVG---TEEVNLSHSADIK-------NSSLA 683
FSR+ +L S G DC+V+ WD K + + V T V SA ++S
Sbjct: 555 FSRESTVLVSGGSDCTVRAWDVFKTNYNNPVSSSLTGSVVTPFSAKTSTFNEVNWSTSPD 614
Query: 684 YLVRSYKTKASPLLHLIFSRRNILL 708
+V Y TK +P+ ++ F+RRN+ L
Sbjct: 615 QMVALY-TKQTPIFNVSFTRRNLCL 638
Score = 233 (87.1 bits), Expect = 2.7e-30, Sum P(2) = 2.7e-30
Identities = 61/203 (30%), Positives = 92/203 (45%)
Query: 468 FSPDRSLLLSCS-QDNTIRLWSLLL-WRCL------------VVYKGHGHPVWDIKFSPH 513
FSPD S +++C Q++ IRLWS+ + L V H PV+ FSP
Sbjct: 332 FSPD-STMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPVYGTTFSPD 390
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
Y S D ARLW+ D+ L + GH V V F P +Y AT S D+T +LW C
Sbjct: 391 NKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSC 450
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRA 633
+R+ GH + V ++F ++ + D +WD+ V A
Sbjct: 451 DHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTA 510
Query: 634 LCFSRDGNILASSGQDCSVKLWD 656
+ + DG+ +AS+ + + LWD
Sbjct: 511 VAIAPDGHTMASADSEGLIHLWD 533
Score = 200 (75.5 bits), Expect = 6.1e-92, Sum P(3) = 6.1e-92
Identities = 42/102 (41%), Positives = 65/102 (63%)
Query: 335 DPNA---PPVDRIPLPPLKDSEKIDKLKALREATKRVTLGPE-SLPSIACYTLLNARQQV 390
+PNA P D IPLPP K + + +++A+++ +KR+ LGP SLPS+ YT + +
Sbjct: 268 EPNAEDAPSRDYIPLPPHKGVDILSEVEAVKDWSKRLHLGPRASLPSVCMYTFHHTNNNM 327
Query: 391 TCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQD 432
CAE S D +++A GF ESYI+LWS+ K K++ S ++D
Sbjct: 328 NCAEFSPDSTMIACGFQESYIRLWSIKADK-KSLPKSTSVED 368
Score = 183 (69.5 bits), Expect = 6.1e-92, Sum P(3) = 6.1e-92
Identities = 51/211 (24%), Positives = 98/211 (46%)
Query: 80 SKQSGKAP-DKNTLITMLKLLRQYNLRGTEEQLKKEINVNDLGIDPNDSEIGDLLSAYES 138
S +G P D N ++ L L + TE L+ E + + + ++ I
Sbjct: 2 SATNGPQPQDLNRIV--LDYLAKKGYSRTEAMLRLEASGSGVSVEEKLKSI--------- 50
Query: 139 EGDPNLYEDAYQDLKKFIENSLDVYKYELGLVLYPVLVHMYIELVYNGHEHQATEMLHKH 198
E P+ Y Y L+ ++++SL++YK EL +L+P+ VH Y+ L+ H A +
Sbjct: 51 EETPDAYTHTYTILRDWVDSSLELYKAELHRILFPIFVHSYLNLLSQDHYEAAKQFYELF 110
Query: 199 LMDHEPHYQEDLRKLSSVTKRDQIRTNEIAETFRSTEFIIRMSRDTLSLLKRHLQEKKH- 257
DH + D++ L S++ + + A+ +R ++ + SR T LL L E
Sbjct: 111 KDDHTDLHDFDVKNLKSLSLPSHVAEDRTAQQYRQNKYQLHFSRITFDLLLHFLFENVSN 170
Query: 258 --TVLLNIVQEHLYFDMYEGEATRQDNKAKI 286
++++ ++ +H+ + G T +N AK+
Sbjct: 171 GGSIIIKLINQHIDIHIVPGRPTVLEN-AKV 200
Score = 178 (67.7 bits), Expect = 1.3e-40, Sum P(3) = 1.3e-40
Identities = 36/119 (30%), Positives = 59/119 (49%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
R GH V ++F P+ + +L+ S D T RLW + + V+ GH PV + +P
Sbjct: 457 RVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPD 516
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWD 572
G+ ASA + + LW + ++ GH ++ + F S + +G SD T+R WD
Sbjct: 517 GHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWD 575
Score = 123 (48.4 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 38/155 (24%), Positives = 65/155 (41%)
Query: 539 LFVGHYSD--VDCVQFHPNSNYVATGSSDRTIRLWDC------------VTGSH--VRLL 582
++ H+++ ++C +F P+S +A G + IRLW V S VRLL
Sbjct: 317 MYTFHHTNNNMNCAEFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLL 376
Query: 583 TGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNI 642
+ H PVY +FS ++L S D + +W + V + F G+
Sbjct: 377 S-HSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHY 435
Query: 643 LASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADI 677
A++ D + +LW D + V H +D+
Sbjct: 436 FATASHDQTAQLWS----CDHIYPLRVFAGHLSDV 466
Score = 115 (45.5 bits), Expect = 4.8e-34, Sum P(3) = 4.8e-34
Identities = 24/91 (26%), Positives = 37/91 (40%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D R+ D + R GH PV ++ +PD + S + I LW + R +
Sbjct: 484 DKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTM 543
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLW 529
+GH ++ + FS S G D R W
Sbjct: 544 RGHRGNIYSLSFSRESTVLVSGGSDCTVRAW 574
Score = 84 (34.6 bits), Expect = 7.8e-31, Sum P(3) = 7.8e-31
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 441 LVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL 489
L+ + D +T+ GH G + LSFS + ++L+S D T+R W +
Sbjct: 528 LIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDV 576
Score = 52 (23.4 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 388 QQVTCAEISEDVSILAVGFSESYIKLWSL-VPQKLKAMK 425
Q VT I+ D +A SE I LW + +++K M+
Sbjct: 506 QPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMR 544
Score = 37 (18.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 7/35 (20%), Positives = 16/35 (45%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSL 416
T+ R + S + ++L G S+ ++ W +
Sbjct: 542 TMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDV 576
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 728 (261.3 bits), Expect = 1.0e-86, Sum P(2) = 1.0e-86
Identities = 148/329 (44%), Positives = 199/329 (60%)
Query: 329 SKKTKSDPNAPPVDRIPLPPLKDSEKIDKLKALREATKRVTLGPESLPSIACYTLLNARQ 388
S +T++ PP +P P L++ L+ L+E+ KRV GP SL +I Y N Q
Sbjct: 215 SSRTENSSLEPP--EVPSPILQNEAA---LEVLQESIKRVKDGPPSLTTICFYAFYNTEQ 269
Query: 389 QVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDER 448
+ AEIS D +LA GF S IKLWSL +KLK+ I + CD + +E
Sbjct: 270 LLNTAEISSDSKLLAAGFDNSCIKLWSLRSKKLKSEPHHVDTSRIRLACDTLEEEENEED 329
Query: 449 NAETT-RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWD 507
N T + L GH GPV F D S LLSCS+D +IR W L + V+Y+GH +PVWD
Sbjct: 330 NTGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWD 389
Query: 508 IKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRT 567
+ SP YFAS HDR ARLW+ D +PLR++ GH +DVDCV+FHPNSNY+ATGS+D+T
Sbjct: 390 VDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKT 449
Query: 568 IRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXX 627
+RLW G+ VRL TGH+ PV +LSFS G++LASAG D + +WDL++
Sbjct: 450 VRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGH 509
Query: 628 XDVVRALCFSRDGNILASSGQDCSVKLWD 656
D + +L FS D ++AS+ D SV++WD
Sbjct: 510 TDSITSLAFSPDSGLIASASMDNSVRVWD 538
Score = 284 (105.0 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 66/221 (29%), Positives = 104/221 (47%)
Query: 435 MEC-DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWR 493
+ C +D+ +R D + T GH PV + SP S S D T RLWS
Sbjct: 358 LSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTY 417
Query: 494 CLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFH 553
L +Y GH V +KF P+ Y A+ D+ RLW+ + +RLF GH V + F
Sbjct: 418 PLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFS 477
Query: 554 PNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMW 613
PN Y+A+ D+ ++LWD +G+ + L GH + +L+FS +ASA D +V +W
Sbjct: 478 PNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVW 537
Query: 614 DLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKL 654
D+ + + + + N+L+ C++ L
Sbjct: 538 DIRSTCCNTPADGSSGELVGVYTGQMSNVLSVQFMACNLLL 578
Score = 222 (83.2 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 79/292 (27%), Positives = 127/292 (43%)
Query: 326 SMFSKKTKSDPNAPPVDRIPLPPLKDSEKIDKLKALREATKRVTLGPESLPSIACYTLLN 385
S+ SKK KS+P+ RI L D+ + ++ + T+ L P + L +
Sbjct: 296 SLRSKKLKSEPHHVDTSRIRLAC--DTLEEEENEEDNTGTEMKILRGHCGPVYSTRFLAD 353
Query: 386 ARQQVTCAEISEDVSILA--VG-FSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILV 442
+ ++C SED+SI +G F+ + + P + + S D
Sbjct: 354 SSGLLSC---SEDMSIRYWDLGSFTNTVLYQGHAYP--VWDVDISPFSLYFASGSHDRTA 408
Query: 443 RIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHG 502
R+ R GH V + F P+ + L + S D T+RLWS + ++ GH
Sbjct: 409 RLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHR 468
Query: 503 HPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATG 562
PV + FSP+G Y ASAG D+ +LW S + GH + + F P+S +A+
Sbjct: 469 GPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASA 528
Query: 563 SSDRTIRLWD-----CVT------GSHVRLLTGHKAPVYALSFSVCGRFLAS 603
S D ++R+WD C T G V + TG + V ++ F C L +
Sbjct: 529 SMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQMSNVLSVQFMACNLLLVT 580
Score = 220 (82.5 bits), Expect = 2.2e-26, Sum P(2) = 2.2e-26
Identities = 64/206 (31%), Positives = 94/206 (45%)
Query: 497 VYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNS 556
+ +GH PV+ +F S D R W S+ L+ GH V V P S
Sbjct: 337 ILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFS 396
Query: 557 NYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLS 616
Y A+GS DRT RLW +R+ GH A V + F +LA+ D V +W
Sbjct: 397 LYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQ 456
Query: 617 NXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAK--LSDEV-G-TEEV-NL 671
V +L FS +G LAS+G+D +KLWD A L E+ G T+ + +L
Sbjct: 457 QGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSL 516
Query: 672 SHSAD---IKNSSLAYLVRSYKTKAS 694
+ S D I ++S+ VR + +++
Sbjct: 517 AFSPDSGLIASASMDNSVRVWDIRST 542
Score = 158 (60.7 bits), Expect = 1.0e-86, Sum P(2) = 1.0e-86
Identities = 41/171 (23%), Positives = 85/171 (49%)
Query: 110 QLKKEINVNDLGIDPNDSEIGDLLSAYESEGDPNLYEDAYQDLKKFIENSLDVYKYELGL 169
Q +E+ N L + ++S + +SA + +P YE + L+ F+ +S Y E+
Sbjct: 37 QTPEEMAAN-LTVQ-SESGCANAVSAAPCQAEPQQYEVQFGRLRSFLTDSDSQYSREVMP 94
Query: 170 VLYPVLVHMYIELVYNGHEHQATEMLHK-HLMDHEPHYQED-LRKLSSVTKRDQIRTNEI 227
+LYP+ V++++ LV +G + + H M + Q+D + +L + I +N
Sbjct: 95 LLYPLFVYLHLNLVQSGPKSTVESFYSRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFQ 154
Query: 228 AETFRSTEFIIRMSRDTLSLLKRHLQEKKHTVLLNIVQEHLYFDMYEGEAT 278
F ++++R+ D+ + L R+LQ +T L ++ H++ D+ + T
Sbjct: 155 LRAFLDNKYVVRLQEDSYNYLIRYLQSDNNTALCKVLAVHIHLDVQPAKRT 205
Score = 95 (38.5 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 27/103 (26%), Positives = 40/103 (38%)
Query: 575 TGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRAL 634
TG+ +++L GH PVY+ F L S D ++ WDL + V +
Sbjct: 331 TGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDV 390
Query: 635 CFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADI 677
S AS D + +LW F D + H AD+
Sbjct: 391 DISPFSLYFASGSHDRTARLWSF----DRTYPLRIYAGHLADV 429
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 721 (258.9 bits), Expect = 2.1e-86, Sum P(2) = 2.1e-86
Identities = 165/382 (43%), Positives = 224/382 (58%)
Query: 329 SKKTKSDPNAPPVDRIPLPPLKDSEKIDKLKALREATKRVTLGPESLPSIACYTLLNARQ 388
S +++++ PP D +P P L++ L+ L+E+ KRV GP SL +I Y N Q
Sbjct: 215 SSRSENNGLEPP-D-MPSPILQNEAA---LEVLQESIKRVKDGPPSLTTICFYAFYNTEQ 269
Query: 389 QVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDER 448
+ AEIS D +LA GF S IKLWSL +KLK+ + I + CD IL DE
Sbjct: 270 LLNTAEISPDSKLLAAGFDNSCIKLWSLRSKKLKSEPHQVDVSRIHLACD-ILEEEDDED 328
Query: 449 -NAETT-RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVW 506
NA T + L GH GPV F D S LLSCS+D +IR W L + V+Y+GH +PVW
Sbjct: 329 DNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVW 388
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
D+ SP+ YFAS HDR ARLW+ D +PLR++ GH +DVDCV+FHPNSNY+ATGS+D+
Sbjct: 389 DLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDK 448
Query: 567 TIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXX 626
T+RLW G+ VRL TGH+ PV +L+FS G++LASAG D + +WDL++
Sbjct: 449 TVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRG 508
Query: 627 XXDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLV 686
D + +L FS D ++AS+ D SV++WD N SA SS + LV
Sbjct: 509 HTDNITSLTFSPDSGLIASASMDNSVRVWDIR-----------NTYCSAPADGSS-SELV 556
Query: 687 RSYKTKASPLLHLIFSRRNILL 708
Y + S +L + F N+LL
Sbjct: 557 GVYTGQMSNVLSVQFMACNLLL 578
Score = 225 (84.3 bits), Expect = 2.4e-27, Sum P(2) = 2.4e-27
Identities = 84/296 (28%), Positives = 130/296 (43%)
Query: 326 SMFSKKTKSDPNAPPVDRIPLP-PLKDSEKIDKLKALREATKRVTLGPESLPSIACYTLL 384
S+ SKK KS+P+ V RI L + + E + A T+ L P + L
Sbjct: 296 SLRSKKLKSEPHQVDVSRIHLACDILEEEDDEDDNA---GTEMKILRGHCGPVYSTRFLA 352
Query: 385 NARQQVTCAEISEDVSILA--VG-FSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDIL 441
++ ++C SED+SI +G F+ + + P + + S D
Sbjct: 353 DSSGLLSC---SEDMSIRYWDLGSFTNTVLYQGHAYP--VWDLDISPYSLYFASGSHDRT 407
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGH 501
R+ R GH V + F P+ + L + S D T+RLWS + ++ GH
Sbjct: 408 ARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGH 467
Query: 502 GHPVWDIKFSPHGYYFASAGHDRMARLWATDS---YHPLRLFVGHYSDVDCVQFHPNSNY 558
PV + FSP+G Y ASAG D+ +LW S Y LR GH ++ + F P+S
Sbjct: 468 RGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELR---GHTDNITSLTFSPDSGL 524
Query: 559 VATGSSDRTIRLWD-----C---VTGSHVRLL---TGHKAPVYALSFSVCGRFLAS 603
+A+ S D ++R+WD C GS L+ TG + V ++ F C L +
Sbjct: 525 IASASMDNSVRVWDIRNTYCSAPADGSSSELVGVYTGQMSNVLSVQFMACNLLLVT 580
Score = 162 (62.1 bits), Expect = 2.1e-86, Sum P(2) = 2.1e-86
Identities = 50/206 (24%), Positives = 100/206 (48%)
Query: 110 QLKKEINVNDLGIDPNDSEIGDLLSAYESEGDPNLYEDAYQDLKKFIENSLDVYKYELGL 169
Q +E+ N L + ++S +++SA + +P YE + L+ F+ +S + +E+
Sbjct: 37 QTAEEMAAN-LTVQ-SESGCANIVSAAPCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMP 94
Query: 170 VLYPVLVHMYIELVYNGHEHQATEMLHK-HLMDHEPHYQED-LRKLSSVTKRDQIRTNEI 227
+LYP+ V++++ LV N + + H M + Q+D + +L + I +N
Sbjct: 95 LLYPLFVYLHLNLVQNSPKSTVESFYSRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFK 154
Query: 228 AETFRSTEFIIRMSRDTLSLLKRHLQEKKHTVLLNIVQEHLYFDM-------YE----GE 276
F ++++R+ D+ + L R+LQ +T L ++ H++ D+ Y+ G
Sbjct: 155 LRAFLDNKYVVRLQEDSYNYLIRYLQSDNNTALCKVLTLHIHLDVQPAKRTDYQLYASGS 214
Query: 277 ATRQDNKAKIYYGMPREPDLQNTIAV 302
++R +N MP P LQN A+
Sbjct: 215 SSRSENNGLEPPDMP-SPILQNEAAL 239
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 722 (259.2 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
Identities = 151/328 (46%), Positives = 204/328 (62%)
Query: 332 TKSDPNA-PPVDRIPLPPLKDSEKIDKLKALREATKRVTLGPESLPSIACYTLLNARQQV 390
++S+ N P D +P P L++ L+ L+E+ KRV GP SL +I Y N Q +
Sbjct: 234 SRSEGNGLEPTD-MPAPILQNEAA---LEVLQESIKRVKDGPPSLTTICFYAFYNTEQLL 289
Query: 391 TCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDER-N 449
AEIS D +LA GF S IKLWSL +KLK+ + I + CD IL DE N
Sbjct: 290 NTAEISPDSKLLAAGFDNSCIKLWSLRSKKLKSEPHQVDVSRIHLACD-ILEEEDDEDDN 348
Query: 450 AETT-RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDI 508
A T + L GH GPV F D S LLSCS+D +IR W L + V+Y+GH +PVWD+
Sbjct: 349 AGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDL 408
Query: 509 KFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTI 568
SP+ YFAS HDR ARLW+ D +PLR++ GH +DVDCV+FHPNSNY+ATGS+D+T+
Sbjct: 409 DISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTV 468
Query: 569 RLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXX 628
RLW G+ VRL TGH+ PV +L+FS G++LASAG D + +WDL++
Sbjct: 469 RLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHT 528
Query: 629 DVVRALCFSRDGNILASSGQDCSVKLWD 656
D + +L FS D +++AS+ D SV++WD
Sbjct: 529 DNITSLTFSPDSSLIASASMDNSVRVWD 556
Score = 293 (108.2 bits), Expect = 1.4e-34, Sum P(2) = 1.4e-34
Identities = 68/221 (30%), Positives = 104/221 (47%)
Query: 435 MEC-DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWR 493
+ C +D+ +R D + T GH PV L SP S S D T RLWS
Sbjct: 376 LSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTY 435
Query: 494 CLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFH 553
L +Y GH V +KF P+ Y A+ D+ RLW+ + +RLF GH V + F
Sbjct: 436 PLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFS 495
Query: 554 PNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMW 613
PN Y+A+ D+ ++LWD +G+ + L GH + +L+FS +ASA D +V +W
Sbjct: 496 PNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVW 555
Query: 614 DLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKL 654
D+ N + + + N+L+ C++ L
Sbjct: 556 DIRNTYCSTPADGSSGELVGVYTGQMSNVLSVQFMACNLLL 596
Score = 230 (86.0 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
Identities = 84/296 (28%), Positives = 131/296 (44%)
Query: 326 SMFSKKTKSDPNAPPVDRIPLP-PLKDSEKIDKLKALREATKRVTLGPESLPSIACYTLL 384
S+ SKK KS+P+ V RI L + + E + A T+ L P + L
Sbjct: 314 SLRSKKLKSEPHQVDVSRIHLACDILEEEDDEDDNA---GTEMKILRGHCGPVYSTRFLA 370
Query: 385 NARQQVTCAEISEDVSILA--VG-FSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDIL 441
++ ++C SED+SI +G F+ + + P + + S D
Sbjct: 371 DSSGLLSC---SEDMSIRYWDLGSFTNTVLYQGHAYP--VWDLDISPYSLYFASGSHDRT 425
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGH 501
R+ R GH V + F P+ + L + S D T+RLWS + ++ GH
Sbjct: 426 ARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGH 485
Query: 502 GHPVWDIKFSPHGYYFASAGHDRMARLWATDS---YHPLRLFVGHYSDVDCVQFHPNSNY 558
PV + FSP+G Y ASAG D+ +LW S Y LR GH ++ + F P+S+
Sbjct: 486 RGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELR---GHTDNITSLTFSPDSSL 542
Query: 559 VATGSSDRTIRLWD-----CVT------GSHVRLLTGHKAPVYALSFSVCGRFLAS 603
+A+ S D ++R+WD C T G V + TG + V ++ F C L +
Sbjct: 543 IASASMDNSVRVWDIRNTYCSTPADGSSGELVGVYTGQMSNVLSVQFMACNLLLVT 598
Score = 218 (81.8 bits), Expect = 4.2e-26, Sum P(2) = 4.2e-26
Identities = 58/188 (30%), Positives = 81/188 (43%)
Query: 497 VYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNS 556
+ +GH PV+ +F S D R W S+ L+ GH V + P S
Sbjct: 355 ILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYS 414
Query: 557 NYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLS 616
Y A+GS DRT RLW +R+ GH A V + F +LA+ D V +W
Sbjct: 415 LYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQ 474
Query: 617 NXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAK--LSDEVGTEEVNLSHS 674
V +L FS +G LAS+G+D +KLWD A L E+ N++
Sbjct: 475 QGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSL 534
Query: 675 ADIKNSSL 682
+SSL
Sbjct: 535 TFSPDSSL 542
Score = 158 (60.7 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
Identities = 40/171 (23%), Positives = 86/171 (50%)
Query: 110 QLKKEINVNDLGIDPNDSEIGDLLSAYESEGDPNLYEDAYQDLKKFIENSLDVYKYELGL 169
Q +E+ N L + ++S +++SA + +P YE + L+ F+ +S + +E+
Sbjct: 55 QTAEEMAAN-LTVQ-SESGCANIVSAAPCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMP 112
Query: 170 VLYPVLVHMYIELVYNGHEHQATEMLHK-HLMDHEPHYQED-LRKLSSVTKRDQIRTNEI 227
+LYP+ V++++ LV N + + H M + Q+D + +L + I +N
Sbjct: 113 LLYPLFVYLHLNLVQNSPKSTVESFYSRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFK 172
Query: 228 AETFRSTEFIIRMSRDTLSLLKRHLQEKKHTVLLNIVQEHLYFDMYEGEAT 278
F ++++R+ D+ + L R+LQ +T L ++ H++ D+ + T
Sbjct: 173 LRAFLDNKYVVRLQEDSYNYLIRYLQSDNNTALCKVLTLHIHLDVQPAKRT 223
Score = 93 (37.8 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 27/102 (26%), Positives = 39/102 (38%)
Query: 576 GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALC 635
G+ +++L GH PVY+ F L S D ++ WDL + V L
Sbjct: 350 GTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLD 409
Query: 636 FSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADI 677
S AS D + +LW F D + H AD+
Sbjct: 410 ISPYSLYFASGSHDRTARLWSF----DRTYPLRIYAGHLADV 447
Score = 47 (21.6 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 637 SRDGNILASSGQDCSVKLWDFA--KLSDEVGTEEVNLSHSA-DI 677
S D +LA+ + +KLW KL E +V+ H A DI
Sbjct: 295 SPDSKLLAAGFDNSCIKLWSLRSKKLKSEPHQVDVSRIHLACDI 338
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 720 (258.5 bits), Expect = 5.7e-86, Sum P(2) = 5.7e-86
Identities = 157/370 (42%), Positives = 216/370 (58%)
Query: 340 PVDRIPLPPLKDSEKIDKLKALREATKRVTLGPESLPSIACYTLLNARQQVTCAEISEDV 399
P D +P P L++ AL E+ KRV GP SL +I Y N Q + AE+S D
Sbjct: 224 PAD-MPAPILQNEA------ALEESIKRVKDGPPSLTTIYFYAFYNTEQLLNTAEVSPDS 276
Query: 400 SILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETT-RTLVG 458
+LA GF S IKLWSL +KLK+ + I + CD + ++ N T + L G
Sbjct: 277 KLLAAGFDNSCIKLWSLRSKKLKSEPHQVDVSRIHLACDFLEEEDDEDDNLGTEMKVLRG 336
Query: 459 HEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFA 518
H GPV F D S LLSCS+D +IR W L + V+Y+GH +PVWD+ SPH YFA
Sbjct: 337 HCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSLYFA 396
Query: 519 SAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH 578
SA HDR ARLW+ D +PLR++ GH +DVDCV+FHPNSNY+ATGS+D+T+RLW G+
Sbjct: 397 SASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNS 456
Query: 579 VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSR 638
VRL TGH+ PV +L+FS G++LASAG D + +WDL++ D + +L FS
Sbjct: 457 VRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSP 516
Query: 639 DGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLH 698
D +++AS+ D SV++WD + SH + + S + LV Y + S +L
Sbjct: 517 DSSLVASASMDNSVRVWD------------IRSSHCSTPADGSSSELVGVYTGQMSNVLS 564
Query: 699 LIFSRRNILL 708
+ F N+LL
Sbjct: 565 VQFMACNLLL 574
Score = 235 (87.8 bits), Expect = 3.6e-28, Sum P(2) = 3.6e-28
Identities = 87/295 (29%), Positives = 132/295 (44%)
Query: 326 SMFSKKTKSDPNAPPVDRIPLPPLKDSEKIDKLKALREATKRVTLGPESLPSIACYTLLN 385
S+ SKK KS+P+ V RI L E+ D+ L T+ L P + L +
Sbjct: 292 SLRSKKLKSEPHQVDVSRIHLACDFLEEEDDEDDNL--GTEMKVLRGHCGPVYSTRFLAD 349
Query: 386 ARQQVTCAEISEDVSILA--VG-FSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILV 442
+ ++C SED+SI +G F+ + + P + + S D
Sbjct: 350 SSGLLSC---SEDMSIRYWDLGSFTNTVLYQGHAYP--VWDLDISPHSLYFASASHDRTA 404
Query: 443 RIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHG 502
R+ R GH V + F P+ + L + S D T+RLWS + ++ GH
Sbjct: 405 RLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHR 464
Query: 503 HPVWDIKFSPHGYYFASAGHDRMARLWATDS---YHPLRLFVGHYSDVDCVQFHPNSNYV 559
PV + FSP+G Y ASAG D+ +LW S Y LR GH ++ + F P+S+ V
Sbjct: 465 GPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELR---GHTDNITSLTFSPDSSLV 521
Query: 560 ATGSSDRTIRLWD-----CVT---GSHVRLL---TGHKAPVYALSFSVCGRFLAS 603
A+ S D ++R+WD C T GS L+ TG + V ++ F C L +
Sbjct: 522 ASASMDNSVRVWDIRSSHCSTPADGSSSELVGVYTGQMSNVLSVQFMACNLLLVT 576
Score = 159 (61.0 bits), Expect = 5.7e-86, Sum P(2) = 5.7e-86
Identities = 43/185 (23%), Positives = 91/185 (49%)
Query: 100 RQY-NLRGTEEQLKKEINVNDLGIDPN-DSEIG--DLLSAYESEGDPNLYEDAYQDLKKF 155
RQY + G ++ L+ + ++ SE G +++SA + +P YE + L+ F
Sbjct: 20 RQYGDADGPKQILRLSQSTEEMAASLTVQSESGCANIVSAAPCQAEPQQYEVQFGRLRNF 79
Query: 156 IENSLDVYKYELGLVLYPVLVHMYIELVYNGHEHQATEMLHK-HLMDHEPHYQED-LRKL 213
+ +S + +E+ +LYP+ V++++ L+ N + + H M + Q+D + +L
Sbjct: 80 LTDSDSQHSHEVMPLLYPLFVYLHLTLIQNSPKSTVESFYSRFHGMFLQNASQKDVIEQL 139
Query: 214 SSVTKRDQIRTNEIAETFRSTEFIIRMSRDTLSLLKRHLQEKKHTVLLNIVQEHLYFDMY 273
+ I +N F ++++R+ D+ + L R+LQ +T L I+ H++ D+
Sbjct: 140 QTTQTIQDILSNFRLRAFLDNKYVVRLQEDSYNYLLRYLQSDNNTALCRILAWHIHLDVQ 199
Query: 274 EGEAT 278
+ T
Sbjct: 200 PAKRT 204
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 712 (255.7 bits), Expect = 1.0e-84, Sum P(2) = 1.0e-84
Identities = 160/371 (43%), Positives = 216/371 (58%)
Query: 340 PVDRIPLPPLKDSEKIDKLKALREATKRVTLGPESLPSIACYTLLNARQQVTCAEISEDV 399
P D +P P L++ L+ L+E+ KRV GP SL +I Y N Q + AEIS +
Sbjct: 225 PTD-MPAPILQNEAA---LEVLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPES 280
Query: 400 SILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETT--RTLV 457
+LA GF S IKLWSL +KLK + I + CD IL DE + T + L
Sbjct: 281 KLLAAGFDNSCIKLWSLRSKKLKPEPHRVDVSRIHLACD-ILEEEDDEDDDVGTEMKVLR 339
Query: 458 GHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYF 517
GH GPV F D S LLSCS+D +IR W L + V+Y+GH +PVWD+ SP+ YF
Sbjct: 340 GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPYSLYF 399
Query: 518 ASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGS 577
AS HDR ARLW+ D +PLR++ GH +DVDCV+FHPNSNY+ATGS+D+T+RLW G+
Sbjct: 400 ASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGN 459
Query: 578 HVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFS 637
VRL TGH+ PV +L+FS G++LASAG D + +WDL++ D + +L FS
Sbjct: 460 SVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFS 519
Query: 638 RDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLL 697
D +++AS+ D SV++WD N SA SS + LV Y + S +L
Sbjct: 520 PDSSLIASASMDNSVRVWDIR-----------NTHCSAPTDGSS-SELVGVYTGQMSNVL 567
Query: 698 HLIFSRRNILL 708
+ F N+LL
Sbjct: 568 SVQFMACNLLL 578
Score = 155 (59.6 bits), Expect = 1.0e-84, Sum P(2) = 1.0e-84
Identities = 39/171 (22%), Positives = 85/171 (49%)
Query: 110 QLKKEINVNDLGIDPNDSEIGDLLSAYESEGDPNLYEDAYQDLKKFIENSLDVYKYELGL 169
Q +E+ N L + ++S +++SA + +P YE + L+ F+ +S + +E+
Sbjct: 37 QSAEEMAAN-LAVQ-SESGCANIVSAAPCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMP 94
Query: 170 VLYPVLVHMYIELVYNGHEHQATEMLHK-HLMDHEPHYQED-LRKLSSVTKRDQIRTNEI 227
+LYP+ V++++ LV N + + H M + Q+D + +L + I +N
Sbjct: 95 LLYPLFVYLHLNLVQNSAKSTVESFYSRFHGMFLQNASQKDVIEQLQTTQTVQDILSNFR 154
Query: 228 AETFRSTEFIIRMSRDTLSLLKRHLQEKKHTVLLNIVQEHLYFDMYEGEAT 278
F ++++R+ D+ + L R+LQ + L ++ H++ D+ + T
Sbjct: 155 LRAFLDNKYVVRLQEDSYNYLLRYLQSDNNAALCRVLTWHIHLDVQPAKRT 205
Score = 41 (19.5 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 326 SMFSKKTKSDPNAPPVDRIPL 346
S+ SKK K +P+ V RI L
Sbjct: 296 SLRSKKLKPEPHRVDVSRIHL 316
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 697 (250.4 bits), Expect = 1.3e-82, Sum P(2) = 1.3e-82
Identities = 143/327 (43%), Positives = 200/327 (61%)
Query: 332 TKSDPNAPPVDRIPLPPLKDSEKIDKLKALREATKRVTLGPESLPSIACYTLLNARQQVT 391
++++ N +P L++ L+ L+++ KRV GP SL +I Y N Q +
Sbjct: 216 SRNESNGLEPSEVPASILQNEAA---LELLQDSIKRVKDGPPSLTTICFYAFYNTEQLLN 272
Query: 392 CAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAE 451
AEIS + +LA GF S +KLWSL +KLK+ + I + CD IL +E ++
Sbjct: 273 TAEISPNSKLLAAGFDNSCVKLWSLRSKKLKSEPHLVDVSRIRLACD-ILDEEEEEDDSA 331
Query: 452 TT--RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIK 509
T + L GH GPV F D S LLSCS+D +IR W L + V+Y+GH +PVWD+
Sbjct: 332 GTEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLD 391
Query: 510 FSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIR 569
SP YFASA HDR ARLW+ D +PLR++ GH DVDCV+FHPNSNY+ATGS+D+T+R
Sbjct: 392 ISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVR 451
Query: 570 LWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXD 629
LW G+ VRL TGH+ PV AL+FS G++LASAG D + +WDL++ D
Sbjct: 452 LWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTD 511
Query: 630 VVRALCFSRDGNILASSGQDCSVKLWD 656
+ +L FS D +++AS+ D SV++WD
Sbjct: 512 NITSLTFSPDSSLIASASMDNSVRVWD 538
Score = 305 (112.4 bits), Expect = 2.2e-35, Sum P(2) = 2.2e-35
Identities = 66/184 (35%), Positives = 95/184 (51%)
Query: 435 MEC-DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWR 493
+ C +D+ +R D R+ T GH PV L SP S S D T RLWS
Sbjct: 358 LSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISPCSLYFASASHDRTARLWSFDRTY 417
Query: 494 CLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFH 553
L +Y GH V +KF P+ Y A+ D+ RLW+T + +RLF GH V + F
Sbjct: 418 PLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFS 477
Query: 554 PNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMW 613
PN Y+A+ D+ ++LWD +G+ + L GH + +L+FS +ASA D +V +W
Sbjct: 478 PNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVW 537
Query: 614 DLSN 617
D+ N
Sbjct: 538 DIRN 541
Score = 214 (80.4 bits), Expect = 5.9e-25, Sum P(2) = 5.9e-25
Identities = 74/254 (29%), Positives = 115/254 (45%)
Query: 326 SMFSKKTKSDPNAPPVDRIPLP-PLKDSEKIDKLKALREATKRVTLGPESLPSIACYTLL 384
S+ SKK KS+P+ V RI L + D E+ + A T+ L P + L
Sbjct: 296 SLRSKKLKSEPHLVDVSRIRLACDILDEEEEEDDSA---GTEMKILRGHCGPVYSTRFLS 352
Query: 385 NARQQVTCAEISEDVSIL---AVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDIL 441
++ ++C SED+SI F+ + + P + + S D
Sbjct: 353 DSSGLLSC---SEDMSIRYWDLRSFTNTVLYQGHAYP--VWDLDISPCSLYFASASHDRT 407
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGH 501
R+ R GH V + F P+ + L + S D T+RLWS + ++ GH
Sbjct: 408 ARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGH 467
Query: 502 GHPVWDIKFSPHGYYFASAGHDRMARLWATDS---YHPLRLFVGHYSDVDCVQFHPNSNY 558
PV + FSP+G Y ASAG D+ +LW S Y LR GH ++ + F P+S+
Sbjct: 468 RGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELR---GHTDNITSLTFSPDSSL 524
Query: 559 VATGSSDRTIRLWD 572
+A+ S D ++R+WD
Sbjct: 525 IASASMDNSVRVWD 538
Score = 208 (78.3 bits), Expect = 2.8e-24, Sum P(2) = 2.8e-24
Identities = 57/188 (30%), Positives = 79/188 (42%)
Query: 497 VYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNS 556
+ +GH PV+ +F S D R W S+ L+ GH V + P S
Sbjct: 337 ILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISPCS 396
Query: 557 NYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLS 616
Y A+ S DRT RLW +R+ GH V + F +LA+ D V +W
Sbjct: 397 LYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQ 456
Query: 617 NXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAK--LSDEVGTEEVNLSHS 674
V AL FS +G LAS+G+D +KLWD A L E+ N++
Sbjct: 457 QGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSL 516
Query: 675 ADIKNSSL 682
+SSL
Sbjct: 517 TFSPDSSL 524
Score = 150 (57.9 bits), Expect = 1.3e-82, Sum P(2) = 1.3e-82
Identities = 40/171 (23%), Positives = 85/171 (49%)
Query: 110 QLKKEINVNDLGIDPNDSEIGDLLSAYESEGDPNLYEDAYQDLKKFIENSLDVYKYELGL 169
Q +E+ N L + ++S +++SA +P YE + L+ F+ +S + +E+
Sbjct: 37 QTAEEMAAN-LTVQ-SESGCANVVSAAPCLPEPQQYEVQFGRLRNFLTDSDSQHSHEVMP 94
Query: 170 VLYPVLVHMYIELVYNGHEHQATEMLHK-HLMDHEPHYQEDL-RKLSSVTKRDQIRTNEI 227
+LYP+ V++++ +V NG + + H M + Q+D+ +L + I +N
Sbjct: 95 LLYPLFVYLHLNMVQNGLKSTVDSFYSRFHGMFLQNASQKDIIEQLQTTMTIQDILSNLK 154
Query: 228 AETFRSTEFIIRMSRDTLSLLKRHLQEKKHTVLLNIVQEHLYFDMYEGEAT 278
F +++IR+ D+ + L R+LQ + L ++ H++ D+ + T
Sbjct: 155 LRAFLDNKYVIRLQEDSYNYLLRYLQSDNNNALCKVLTLHIHLDVQPSKRT 205
Score = 89 (36.4 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 24/86 (27%), Positives = 35/86 (40%)
Query: 572 DCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVV 631
D G+ +++L GH PVY+ F L S D ++ WDL + V
Sbjct: 328 DDSAGTEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPV 387
Query: 632 RALCFSRDGNILASSGQDCSVKLWDF 657
L S AS+ D + +LW F
Sbjct: 388 WDLDISPCSLYFASASHDRTARLWSF 413
Score = 39 (18.8 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 6/27 (22%), Positives = 15/27 (55%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSL 416
+T S D S++A ++ +++W +
Sbjct: 513 ITSLTFSPDSSLIASASMDNSVRVWDI 539
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 672 (241.6 bits), Expect = 1.9e-81, Sum P(2) = 1.9e-81
Identities = 137/317 (43%), Positives = 190/317 (59%)
Query: 340 PVDRIPLPPLKDSEKIDKLKALREATKRVTLGPESLPSIACYTLLNARQQVTCAEISEDV 399
P D +P+ L+ E +D L+E K V GP SL +I Y N Q + AE S D
Sbjct: 225 PTD-LPMYILQKEEDLD---FLQETIKSVQDGPPSLITIYSYAFYNTEQLLNTAEASPDN 280
Query: 400 SILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGH 459
+LA G + S IKLWSL K K+ + I + +D L ++R A + L+GH
Sbjct: 281 KLLATGLNNSSIKLWSLT-SKFKSKPHQIDVSHIHL-INDTLEVDEEDRTATERKVLLGH 338
Query: 460 EGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFAS 519
GPV F PD S LLSCS+D +IR W L + V+Y+GH +PVWD+ SPH +FAS
Sbjct: 339 CGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPHSLFFAS 398
Query: 520 AGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHV 579
A +D ARLW+ D +PLR++ GH + VDCV+FHPNSNY+ATGS+D+T+RLW G+ V
Sbjct: 399 ASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSV 458
Query: 580 RLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRD 639
RL TGH PV L+FS G++L SAG D + +WDL++ D + ++ FS D
Sbjct: 459 RLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLD 518
Query: 640 GNILASSGQDCSVKLWD 656
+++AS+ D SV++WD
Sbjct: 519 SSVIASASMDNSVRIWD 535
Score = 297 (109.6 bits), Expect = 9.0e-36, Sum P(2) = 9.0e-36
Identities = 62/184 (33%), Positives = 94/184 (51%)
Query: 435 MEC-DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWR 493
+ C +D +R D + T GH PV L SP S S D+T RLWS
Sbjct: 355 LSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPHSLFFASASYDHTARLWSFDRTY 414
Query: 494 CLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFH 553
L +Y GH V +KF P+ Y A+ D+ RLW+ + +RLF GH V C+ F
Sbjct: 415 PLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFS 474
Query: 554 PNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMW 613
PN Y+ + D+ ++LWD +G+ + L GH + +++FS+ +ASA D +V +W
Sbjct: 475 PNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLDSSVIASASMDNSVRIW 534
Query: 614 DLSN 617
D+ +
Sbjct: 535 DIKS 538
Score = 214 (80.4 bits), Expect = 2.4e-26, Sum P(2) = 2.4e-26
Identities = 61/205 (29%), Positives = 91/205 (44%)
Query: 497 VYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNS 556
V GH PV+ +F P S D R W +S+ L+ GH V + P+S
Sbjct: 334 VLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPHS 393
Query: 557 NYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLS 616
+ A+ S D T RLW +R+ GH A V + F +LA+ D V +W
Sbjct: 394 LFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQ 453
Query: 617 NXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAK---LSDEVG-TEEV-NL 671
VR L FS +G L S+G+D +KLWD A D G T+++ ++
Sbjct: 454 QGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSV 513
Query: 672 SHSAD---IKNSSLAYLVRSYKTKA 693
+ S D I ++S+ VR + K+
Sbjct: 514 TFSLDSSVIASASMDNSVRIWDIKS 538
Score = 164 (62.8 bits), Expect = 1.9e-81, Sum P(2) = 1.9e-81
Identities = 48/199 (24%), Positives = 94/199 (47%)
Query: 85 KAPDKNTLITMLKLLRQYN-LRGTEEQ-LKKEINVNDLGID---PNDSEIGDLLSAYESE 139
+ + T ++ RQY G +Q L+ +V D+ ++S + +SA +
Sbjct: 5 RTEEMQTAVSCYLKSRQYRGADGPPKQGLRLSQSVQDMATSLAVQSESGCANTVSAAPCQ 64
Query: 140 GDPNLYEDAYQDLKKFIENSLDVYKYELGLVLYPVLVHMYIELVYNGHEHQATEML-HKH 198
DP YE + L+ F+ +S + +EL +LYP+ V+++++LV N + A H H
Sbjct: 65 ADPQQYEVQFGRLRDFLMDSDSQHSHELMPLLYPLFVYLHLDLVQNSPKSTAESFYSHFH 124
Query: 199 LMDHEPHYQED-LRKLSSVTKRDQIRTNEIAETFRSTEFIIRMSRDTLSLLKRHLQEKKH 257
M + Q+D + +L + I +N F ++++R+ D + L +LQ +
Sbjct: 125 GMFLQNASQKDVIEQLQTTQTIQDILSNFRLRAFLDNKYVVRLPEDCYNYLLCYLQSDNN 184
Query: 258 TVLLNIVQEHLYFDMYEGE 276
T L ++ H++ D+ E
Sbjct: 185 TALCRVLTWHIHLDVQPTE 203
Score = 154 (59.3 bits), Expect = 9.5e-20, Sum P(2) = 9.5e-20
Identities = 43/135 (31%), Positives = 58/135 (42%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D VR+ + + R GH GPVR L+FSP+ L+S +D ++LW L
Sbjct: 444 DKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDL 503
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYH---P--------LRLFVGHYSDV 547
GH + + FS ASA D R+W S H P L ++ G S V
Sbjct: 504 HGHTDDITSVTFSLDSSVIASASMDNSVRIWDIKSKHNSTPADGSSSELLGVYTGQMSTV 563
Query: 548 DCVQFHPNSNYVATG 562
VQF S + TG
Sbjct: 564 LNVQFMAGSRLLVTG 578
Score = 89 (36.4 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 34/147 (23%), Positives = 53/147 (36%)
Query: 511 SPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRL 570
SP A+ ++ +LW+ S F +D H ++ + DRT
Sbjct: 277 SPDNKLLATGLNNSSIKLWSLTSK-----FKSKPHQIDVSHIHLINDTLEVDEEDRT--- 328
Query: 571 WDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDV 630
+ ++L GH PVY+ F L S D ++ WDL +
Sbjct: 329 -----ATERKVLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYP 383
Query: 631 VRALCFSRDGNILASSGQDCSVKLWDF 657
V L S AS+ D + +LW F
Sbjct: 384 VWDLDISPHSLFFASASYDHTARLWSF 410
Score = 40 (19.1 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 6/27 (22%), Positives = 15/27 (55%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSL 416
+T S D S++A ++ +++W +
Sbjct: 510 ITSVTFSLDSSVIASASMDNSVRIWDI 536
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 719 (258.2 bits), Expect = 5.1e-81, Sum P(2) = 5.1e-81
Identities = 152/370 (41%), Positives = 219/370 (59%)
Query: 342 DRIPLPP-LKDSEKIDKLKALREATKRVTLGPESLPSIACYTLLNARQQVTCAEISEDVS 400
+R+ +P L +E L+ L++ KRV GP SL ++ Y + Q + AE+S D
Sbjct: 236 ERLEVPAGLPQNEAA--LENLQDCIKRVREGPPSLTTVCFYAFQHTEQLLNTAEVSADSR 293
Query: 401 ILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETT--RTLVG 458
+LA GF S +KLWSL +KLKA + I + CD +L D+ +A + +TL G
Sbjct: 294 LLAAGFDNSAVKLWSLRARKLKAGPHKADVSKIRLACD-VLEEEADDEDASGSEIKTLRG 352
Query: 459 HEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFA 518
H GPV + +F D S LLSCS+D+T+R W L + V+Y+GH +PVWD+ SP YF+
Sbjct: 353 HSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDVSPCSLYFS 412
Query: 519 SAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH 578
+A HDR ARLW+ +PLRL+ GH SDVDCV+FHPNSNY+ATGS+D+T+RLW G+
Sbjct: 413 TASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGAS 472
Query: 579 VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSR 638
VRL TGH+ PV L+FS G++LASAG D + +WDL++ D + +L FS+
Sbjct: 473 VRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQ 532
Query: 639 DGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKASPLLH 698
D +++AS+ D +V++WD N SA S + L+ Y S +L+
Sbjct: 533 DSSLVASASMDNTVRVWDIR-----------NAHGSAPTDGCS-SELIGQYTGSTSNILN 580
Query: 699 LIFSRRNILL 708
+ F N+LL
Sbjct: 581 VQFMACNLLL 590
Score = 113 (44.8 bits), Expect = 5.1e-81, Sum P(2) = 5.1e-81
Identities = 28/155 (18%), Positives = 69/155 (44%)
Query: 126 DSEIGDLLSAYESEGDPNLYEDAYQDLKKFIENSLDVYKYELGLVLYPVLVHMYIELVYN 185
+S +++SA + DP YE+ + L+ F++ + E VL+P+ +++++ +
Sbjct: 50 ESSCANVVSAAPCQADPQQYENQFSRLRSFLQEAEGPLVKEASSVLFPLFLYLHLHMARC 109
Query: 186 GHEHQATEMLHK-H-LMDHEPHYQEDLRKLSSVTKRDQIRTNEIAETFRSTEFIIRMSRD 243
G + + H L +P + + L + TN ++++ ++
Sbjct: 110 GLKGALDSFYSRFHSLFQQDPEQKAIVDLLRGALTLQDVTTNPKLCALLDHKYVVHLTDQ 169
Query: 244 TLSLLKRHLQEKKHTVLLNIVQEHLYFDMYEGEAT 278
S L R+LQ + ++ + ++ HL ++ + T
Sbjct: 170 AYSYLLRYLQSEDNSAICWVLTAHLQVEVTAAQRT 204
>POMBASE|SPBC15D4.14 [details] [associations]
symbol:taf73 "transcription factor TFIID complex subunit
Taf5-like" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=IC] [GO:0005669 "transcription factor TFIID complex"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0030071 "regulation of mitotic
metaphase/anaphase transition" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
PomBase:SPBC15D4.14 GO:GO:0005829 GO:GO:0006355 GO:GO:0030071
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0006367
GO:GO:0000991 GO:GO:0005669 KO:K03130 HOGENOM:HOG000212424
EMBL:AB039954 PIR:T39490 RefSeq:NP_596254.1
ProteinModelPortal:O74319 IntAct:O74319 STRING:O74319
EnsemblFungi:SPBC15D4.14.1 GeneID:2539882 KEGG:spo:SPBC15D4.14
OMA:CATISED OrthoDB:EOG4CRQ92 NextBio:20801027 Uniprot:O74319
Length = 642
Score = 541 (195.5 bits), Expect = 1.5e-79, Sum P(3) = 1.5e-79
Identities = 114/254 (44%), Positives = 147/254 (57%)
Query: 455 TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG 514
+L+GH PV +S SP + +LSCS+D RLWS +V Y GH P+WD++FSP G
Sbjct: 398 SLIGHTRPVFGVSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFG 457
Query: 515 YYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCV 574
YYFA+A HD+ ARLW + PLR+FVGH +DVDCV FHPN+ Y+ATGSSD T R+WD
Sbjct: 458 YYFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVR 517
Query: 575 TGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRAL 634
TG VR+ H +PV AL S G LASA G + +WDL + +V +L
Sbjct: 518 TGGTVRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVYSL 577
Query: 635 CFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKAS 694
FS D IL S G D V WD T NLS D + S L + ++KTK +
Sbjct: 578 SFSYDNKILVSGGADTDVNFWDL--------TYRNNLS---DGEQSPLLF---NFKTKNT 623
Query: 695 PLLHLIFSRRNILL 708
+ +L F+RRN L
Sbjct: 624 IIQNLSFTRRNYCL 637
Score = 232 (86.7 bits), Expect = 7.3e-37, Sum P(3) = 7.3e-37
Identities = 54/184 (29%), Positives = 87/184 (47%)
Query: 435 MEC-DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWR 493
+ C +D R+ + T GH P+ + FSP + S D T RLW +
Sbjct: 419 LSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYFATASHDQTARLWDVEHAA 478
Query: 494 CLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFH 553
L V+ GH + V + F P+ Y A+ D R+W + +R+F H+S V +
Sbjct: 479 PLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRVFNAHHSPVSALCMS 538
Query: 554 PNSNYVATGSSDRTIRLWDCVTGS-HVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHM 612
+ +A+ I++WD + + HV + H + VY+LSFS + L S G D +V+
Sbjct: 539 ADGLSLASADESGIIKVWDLRSSNQHVSFVK-HSSIVYSLSFSYDNKILVSGGADTDVNF 597
Query: 613 WDLS 616
WDL+
Sbjct: 598 WDLT 601
Score = 176 (67.0 bits), Expect = 1.5e-79, Sum P(3) = 1.5e-79
Identities = 55/230 (23%), Positives = 106/230 (46%)
Query: 77 SQTSKQSGKAP-DKNTLITMLKLLRQYNLRGTEEQLKKEINVNDLGIDPNDSEIGDLLSA 135
+Q+S SG + D N ++ L L + TE L+ EI+ +G P + + +
Sbjct: 2 AQSSYSSGNSTSDLNKIV--LDYLFKKGYSRTEAMLRLEIS--SVGAIPEEQQDWHI--- 54
Query: 136 YESEGDPNLYEDAYQDLKKFIENSLDVYKYELGLVLYPVLVHMYIELVYNGHEHQATEML 195
G Y Y L+ +I+ +LD+YK +L VLYP+ VH Y++L+ A
Sbjct: 55 ----GASETYVQVYILLRDWIDGTLDLYKPKLQKVLYPIFVHSYLDLLQKNDPEMAIYFF 110
Query: 196 HKHLMDHEPHYQEDLRKLSSVTKRDQIRTNEIAETFRSTEFIIRMSRDTLSLLKRHLQEK 255
++HE + D+R L+ + + EIA+ +R ++ I +R T LL + L E
Sbjct: 111 ESFRIEHEVLHGYDIRALAQLKIASDVEEIEIAQLYRKNKYRINFTRSTFDLLVQFLFEN 170
Query: 256 KHT---VLLNIVQEHLYFDMYEGEAT-RQDNKAKIYYGMPREPDLQNTIA 301
+ +++ ++ +++ + + ++D + Y M + Q I+
Sbjct: 171 EVNGSGIIIRLLNQYIDIKITMPQVEGKEDPNVQAVYEMDEAKNEQTIIS 220
Score = 114 (45.2 bits), Expect = 1.5e-79, Sum P(3) = 1.5e-79
Identities = 31/92 (33%), Positives = 50/92 (54%)
Query: 326 SMFSKKTKSDPNAPPVDRIPLPPLKDSEKIDKLKALREATKR-VTLGPESL-PSIACYTL 383
++ ++ T P+ PP LPP K + ID +L E+ + + LG + PS+ YT+
Sbjct: 292 NLINESTLESPSDPP-----LPPTKMKD-IDYFVSLLESEQNSLILGKNATDPSVFMYTM 345
Query: 384 LNARQQVTCAEISEDVSILAVGFSESYIKLWS 415
N V CA S+D S+ A+G ++S I L+S
Sbjct: 346 HNTLSAVNCAAFSDDASMFALGCADSSIHLYS 377
Score = 97 (39.2 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 31/124 (25%), Positives = 49/124 (39%)
Query: 545 SDVDCVQFHPNSNYVATGSSDRTIRLWDC-------VTGSHVR-----LLTGHKAPVYAL 592
S V+C F +++ A G +D +I L+ + GS L GH PV+ +
Sbjct: 350 SAVNCAAFSDDASMFALGCADSSIHLYSSTNNGPQPLVGSQNEPLQKSSLIGHTRPVFGV 409
Query: 593 SFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSV 652
S S F+ S DG +W + + FS G A++ D +
Sbjct: 410 SISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYFATASHDQTA 469
Query: 653 KLWD 656
+LWD
Sbjct: 470 RLWD 473
Score = 79 (32.9 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 24/114 (21%), Positives = 47/114 (41%)
Query: 387 RQQVTCAEISEDVSILAVGFSESYIKLWSL-VPQKLKAMKSSDQ-LQDIEMECDDI---- 440
+ V C + + LA G S+ ++W + ++ + + + M D +
Sbjct: 487 QNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRVFNAHHSPVSALCMSADGLSLAS 546
Query: 441 -----LVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL 489
++++ D R++ + V H V LSFS D +L+S D + W L
Sbjct: 547 ADESGIIKVWDLRSSNQHVSFVKHSSIVYSLSFSYDNKILVSGGADTDVNFWDL 600
Score = 49 (22.3 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 23/87 (26%), Positives = 40/87 (45%)
Query: 77 SQTSKQSGKAPDKNTLITMLKLL---RQYNLRGTEEQLKKEI----NVNDLGIDPNDSEI 129
++ S Q G P ++T LK L + ++ G E L K + N+ +L + ++ I
Sbjct: 236 NKQSIQLGLRPLSEEVVTTLKNLLEVKDKDVEGRNEALNKILHPAKNLVEL-LTEKENLI 294
Query: 130 GDLLSAYESEGDPNLYEDAYQDLKKFI 156
+ S ES DP L +D+ F+
Sbjct: 295 NE--STLESPSDPPLPPTKMKDIDYFV 319
>WB|WBGene00006386 [details] [associations]
symbol:taf-5 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0032940 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000910 GO:GO:0001703
EMBL:Z81073 GeneTree:ENSGT00700000104377 KO:K03130 OMA:CATISED
EMBL:Z83122 PIR:T21580 RefSeq:NP_492169.2 ProteinModelPortal:G5EF68
SMR:G5EF68 EnsemblMetazoa:F30F8.8.1 EnsemblMetazoa:F30F8.8.2
EnsemblMetazoa:F30F8.8.3 GeneID:172552 KEGG:cel:CELE_F30F8.8
CTD:172552 WormBase:F30F8.8 NextBio:876007 Uniprot:G5EF68
Length = 648
Score = 668 (240.2 bits), Expect = 1.4e-76, Sum P(2) = 1.4e-76
Identities = 139/379 (36%), Positives = 216/379 (56%)
Query: 333 KSDPNAPPVDRIPLPPLKDSEKIDKLKALREATKRVTLGPESLPSIACYTLLNARQQVTC 392
K + P DRIPLPP+ + + ++ LR+ K + ES SI YT +NA V
Sbjct: 265 KMQTHCPQADRIPLPPISEHLREERRNWLRDVGKMAIISAESPVSICMYTTVNAPIGVAS 324
Query: 393 AEISEDVSILAVGFSESYIKLWSLVPQ-KLKAMKSSDQLQDIEME-CDDILVRIMDERNA 450
+ ++D S++A+G S+S I + ++ P K+K ++ + L I++E D++ ++ D + +
Sbjct: 325 CDFTDDSSLIAMGLSDSSIVMNAMDPMNKMKKLRDMEFLDKIDIETADNVQSQMFDLQGS 384
Query: 451 ETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKF 510
T+ GH GPV ++FSPDR LL+S + D T+RLWS+ R V+Y+ VW +F
Sbjct: 385 TTSVRYTGHGGPVFSVNFSPDRRLLISSAGDRTVRLWSMETQRNAVIYRTPA-VVWQAQF 443
Query: 511 SPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRL 570
GYYFA+A D+ A +W+TD HPLR+F Y DV C+ +HPN NY+A GS DR +R+
Sbjct: 444 CSRGYYFATASADKTAAMWSTDRMHPLRIFADPYGDVGCIDYHPNCNYIAGGSDDRYVRV 503
Query: 571 WDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLS-NXXXXXXXXXXXD 629
WD +G+ VR+ +GHKA + A+ FS CGR++ S GN+ +WDL+
Sbjct: 504 WDVCSGTRVRIFSGHKASIIAVKFSPCGRYIVSLDAIGNLMIWDLAYQRLVAAEITEQAG 563
Query: 630 VVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSY 689
++ FSRDG + A S + S++L+ L V N S+ N + + SY
Sbjct: 564 TKGSITFSRDGGVFAVSHGNSSIQLYSLDTLIGTVLAAGQNDSYIEPKVNLD-GFNIGSY 622
Query: 690 KTKASPLLHLIFSRRNILL 708
TK + ++ L F+RRN+LL
Sbjct: 623 ATKETAVIGLHFTRRNLLL 641
Score = 122 (48.0 bits), Expect = 1.4e-76, Sum P(2) = 1.4e-76
Identities = 42/161 (26%), Positives = 76/161 (47%)
Query: 128 EIGDLLSAYESEGDPNLYEDAYQ-DLKKFIENS---LDVYKYELGLVLYPVLVHMYIELV 183
E G +L S G P E+A + F++++ DV + E +L+P+ H YI L+
Sbjct: 62 EAGPVLRVEGSNGLPP--EEAISVEFDTFVQHANDCTDVVQAEFSQLLFPIFAHSYIALI 119
Query: 184 YNGHEHQAT-EMLHKHLMDHEPH-YQEDLRKLSSVTKRDQIRTNEIAETFRSTEFIIRMS 241
+H AT + P + E + +LS + +R NE R +F++R+S
Sbjct: 120 ---EKHAATARIFFNRFKIFIPECFSEFVYQLSLIEDAMTLRANEHVHILRENKFLVRLS 176
Query: 242 RDTLSLLKRHLQEKKHTVL--LNIVQEHLYFDMYEGEATRQ 280
R TL +HL+ + V+ NI+ +H+ + + +T +
Sbjct: 177 RPTL----KHLESIQTRVIGVKNIIAKHICIENADEVSTNR 213
>FB|FBgn0011569 [details] [associations]
symbol:can "cannonball" species:7227 "Drosophila
melanogaster" [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0007141 "male meiosis I" evidence=IMP] [GO:0048515 "spermatid
differentiation" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0005669 "transcription factor TFIID
complex" evidence=ISS] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=ISS]
[GO:0007126 "meiosis" evidence=TAS] [GO:0007286 "spermatid
development" evidence=IMP;TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0001673
"male germ cell nucleus" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0005730 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007286 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001673 GO:GO:0006367 GO:GO:0010468
GO:GO:0007141 HSSP:P16649 GO:GO:0005669
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:AF346730
RefSeq:NP_524827.1 UniGene:Dm.1796 SMR:Q9VT91 IntAct:Q9VT91
MINT:MINT-834439 STRING:Q9VT91 EnsemblMetazoa:FBtr0076299
GeneID:45432 KEGG:dme:Dmel_CG6577 UCSC:CG6577-RA CTD:12329
FlyBase:FBgn0011569 InParanoid:Q9VT91 OMA:RIWDIVK OrthoDB:EOG4F4QS8
GenomeRNAi:45432 NextBio:838153 Uniprot:Q9VT91
Length = 942
Score = 681 (244.8 bits), Expect = 2.2e-76, Sum P(2) = 2.2e-76
Identities = 143/389 (36%), Positives = 222/389 (57%)
Query: 330 KKTKSDP------NAPPVDRI--PLPPLKDSEKIDKLKALREATKRVTLGPESLPSIACY 381
+K +S+P + PPV+R+ P+P K+D L + R+ L +LPS Y
Sbjct: 493 RKKRSEPQLSDNLHLPPVNRVYNPIP-----NKMDLLHMKSDEQYRMKLDRNNLPSTYLY 547
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDIL 441
T + + V CA SE S+LA+G S + ++SL P KL +K++ L++++ +
Sbjct: 548 TTSPSDEVVICATFSEGNSMLALGTVSSKVYVFSLKPSKLVQVKAAQWLKNLDTGMAGVD 607
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGH 501
++D T RTL GH+GPV SF+P+ L++CS+D ++RLW LL W C+V++ GH
Sbjct: 608 KDMIDPIKKFTRRTLYGHQGPVYGCSFNPEDRFLITCSEDFSVRLWCLLSWSCVVIFSGH 667
Query: 502 GHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVAT 561
PV + F+P GYYFA+A D AR+W D+ P R+ GH +++ FHPN +Y+AT
Sbjct: 668 LAPVCFVVFAPRGYYFATASDDCTARVWMQDNTKPARILQGHLAELGVCLFHPNRHYMAT 727
Query: 562 GSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXX 621
GS+D T+R+WD V VR+ GHK+ + AL +S+CGR+L S G D + +WD +N
Sbjct: 728 GSADCTVRIWDIVKAVQVRIFRGHKSRITALIYSICGRYLVSGGDDNLIMIWDTANEILM 787
Query: 622 XXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAK-LSDEVGTEEVNLSHSADIKNS 680
+ + S D NIL GQDC + LWDF + + + + ++++ + A + S
Sbjct: 788 QFFDHHKASINTMEISLDNNILVVGGQDCQLTLWDFEQVIKNYLNRAKISMKNQAGTQES 847
Query: 681 SLA-YLVRSYKTKASPLLHLIFSRRNILL 708
S LV S+ TK P + F+RRN+LL
Sbjct: 848 SANNLLVSSFFTKGEPFYMIRFTRRNLLL 876
Score = 107 (42.7 bits), Expect = 2.2e-76, Sum P(2) = 2.2e-76
Identities = 43/158 (27%), Positives = 76/158 (48%)
Query: 145 YEDAYQDLKKFIENSLDVYKYELGLVLYPVLVHMYIELVYNGHEHQATEMLHKHLMDH-E 203
YE A + L K I+++ YKYE+ ++LYP+LV Y++++ + + Q ML DH +
Sbjct: 323 YEFAVKKLIKLIQSTPSHYKYEIYILLYPLLVLTYLQMMASD-KIQKARMLLVRFQDHLD 381
Query: 204 PHYQEDLRKLSSVTKRDQIRTNEIAETFRSTEFI-IRMS----RDTLSLLKRHLQEKKHT 258
Y + KL ++K ++ N+ + E + I MS R L + + ++
Sbjct: 382 DSYISRIIKLREISKPAEV-PNKARKLLAGLEKVKIEMSEGAFRQLLLCTEEWTRGQQEK 440
Query: 259 VLLNI-VQEHLYFDMYEGE-ATRQDNKAKIYYGMPREP 294
+L + +Q + D + A Q I+YG P EP
Sbjct: 441 LLSHFQIQPYSEDDKPQQRFAIGQPLLEPIWYGAP-EP 477
Score = 58 (25.5 bits), Expect = 3.3e-71, Sum P(2) = 3.3e-71
Identities = 23/88 (26%), Positives = 40/88 (45%)
Query: 107 TEEQLKKEINVNDLGIDPNDSEIGDLLSAYESEGDPNLYEDAYQDLKKFIENSLDVYKYE 166
++E+L +N ++ D + SE D+ A + + YED+ Q L+ SL V K +
Sbjct: 260 SQEELMAILNEDESSPD-HRSEC-DIDEAIRTRDGSDFYEDSAQFLENMENVSLLVIKED 317
Query: 167 LGLVLYPVLVHMYIELVYNGHEHQATEM 194
Y V I+L+ + H E+
Sbjct: 318 SVFADYEFAVKKLIKLIQSTPSHYKYEI 345
>ASPGD|ASPL0000054735 [details] [associations]
symbol:AN0292 species:162425 "Emericella nidulans"
[GO:0000124 "SAGA complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 HOGENOM:HOG000212424 ProteinModelPortal:C8VUA4
EnsemblFungi:CADANIAT00002423 OMA:GGIWSLS Uniprot:C8VUA4
Length = 606
Score = 596 (214.9 bits), Expect = 9.9e-64, Sum P(2) = 9.9e-64
Identities = 135/344 (39%), Positives = 189/344 (54%)
Query: 331 KTKSDPNAPPVDRIPLPP--LKD-SEKIDKLKALREATK--RVTLGPESLPSIACYTLLN 385
K + D AP IP PP +D + ++ K+K R+ + T G S+ +T N
Sbjct: 192 KKEEDDEAPTRADIPYPPSTARDVAIEVQKVKENRDRFRIESRTGGVGPAVSVCMFTFHN 251
Query: 386 ARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIM 445
+ C + S+D ++A G ESYI++WSL +K+ + S+D+
Sbjct: 252 TYDGINCLDFSDDNLLVAAGMQESYIRVWSLDGKKIPSDDSADE---------------- 295
Query: 446 DERNAETTRTLVGHEGPVRKLSFSPDRS------------LLLSCSQDNTIRLWSLLLWR 493
+R L+GH GPV ++F+P + LLS S D TIRLWSL LW+
Sbjct: 296 ---PPTNSRRLIGHSGPVYAVAFAPSATPSENAVAPTNARWLLSSSADRTIRLWSLDLWQ 352
Query: 494 CLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFH 553
C+VVYKGH PVWD+++ P G+YF S GHD+ ARLW TD R+FVGH DVDCV FH
Sbjct: 353 CMVVYKGHDQPVWDLQWGPFGHYFVSGGHDKTARLWVTDHIRQQRIFVGHEQDVDCVCFH 412
Query: 554 PNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMW 613
PNS YV TGSSDRT+R+W TG+ VR+ TGH + AL+ S G+ LASA G++ +W
Sbjct: 413 PNSAYVFTGSSDRTVRMWAVTTGNAVRMFTGHTGNITALACSRDGKTLASADDHGSILLW 472
Query: 614 DLS-NXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
DL + +L +S + N+L S G D +V++WD
Sbjct: 473 DLGPGRLLKRMRGHGKGGIWSLSWSVESNVLVSGGADGTVRVWD 516
Score = 222 (83.2 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 49/159 (30%), Positives = 78/159 (49%)
Query: 458 GHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYF 517
GH+ PV L + P +S D T RLW R ++ GH V + F P+ Y
Sbjct: 359 GHDQPVWDLQWGPFGHYFVSGGHDKTARLWVTDHIRQQRIFVGHEQDVDCVCFHPNSAYV 418
Query: 518 ASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGS 577
+ DR R+WA + + +R+F GH ++ + + +A+ +I LWD G
Sbjct: 419 FTGSSDRTVRMWAVTTGNAVRMFTGHTGNITALACSRDGKTLASADDHGSILLWDLGPGR 478
Query: 578 HVRLLTGH-KAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
++ + GH K +++LS+SV L S G DG V +WD+
Sbjct: 479 LLKRMRGHGKGGIWSLSWSVESNVLVSGGADGTVRVWDV 517
Score = 144 (55.7 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 46/180 (25%), Positives = 79/180 (43%)
Query: 411 IKLWSL-VPQKLKAMKSSDQ-LQDIEMEC---------DDILVRIMDERNAETTRTLVGH 459
I+LWSL + Q + K DQ + D++ D R+ + R VGH
Sbjct: 343 IRLWSLDLWQCMVVYKGHDQPVWDLQWGPFGHYFVSGGHDKTARLWVTDHIRQQRIFVGH 402
Query: 460 EGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFAS 519
E V + F P+ + + + S D T+R+W++ + ++ GH + + S G AS
Sbjct: 403 EQDVDCVCFHPNSAYVFTGSSDRTVRMWAVTTGNAVRMFTGHTGNITALACSRDGKTLAS 462
Query: 520 AGHDRMARLWATDSYHPLRLFVGH-YSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH 578
A LW L+ GH + + + SN + +G +D T+R+WD + +H
Sbjct: 463 ADDHGSILLWDLGPGRLLKRMRGHGKGGIWSLSWSVESNVLVSGGADGTVRVWDVMGPAH 522
Score = 105 (42.0 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 48/181 (26%), Positives = 67/181 (37%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D VR+ R GH G + L+ S D L S +I LW L R L
Sbjct: 424 DRTVRMWAVTTGNAVRMFTGHTGNITALACSRDGKTLASADDHGSILLWDLGPGRLLKRM 483
Query: 499 KGHGHP-VWDIKFSPHGYYFASAGHDRMARLWAT--DSYHPLRLFV----GHYSDVD-CV 550
+GHG +W + +S S G D R+W ++ P + V G + +D
Sbjct: 484 RGHGKGGIWSLSWSVESNVLVSGGADGTVRVWDVMGPAHDPSQGRVAGEGGAGTKIDGAS 543
Query: 551 QFHPNSNY----VATGSSDRTIRLWDCV-TGSHVRLLTGHKAPVYALSFSVCGRFLASAG 605
NS V G + D V T + K+PVY + F+ L AG
Sbjct: 544 SAAANSTQTPGTVGPGMGSGKKKGKDVVVTPDQISAFPTKKSPVYKVKFTNMN--LIIAG 601
Query: 606 G 606
G
Sbjct: 602 G 602
Score = 72 (30.4 bits), Expect = 9.9e-64, Sum P(2) = 9.9e-64
Identities = 13/53 (24%), Positives = 29/53 (54%)
Query: 204 PHYQEDLRKLSSVTKRDQIRTNEIAETFRSTEFIIRMSRDTLSLLKRHLQEKK 256
P + ED+R L ++ + ++ N IA+ +R ++ + +S L + L+ K+
Sbjct: 23 PEHTEDVRALEPISLPEHVQDNSIAKLYRGNKYRLVLSNPAFGSLMQFLESKQ 75
>FB|FBgn0039067 [details] [associations]
symbol:wda "will decrease acetylation" species:7227
"Drosophila melanogaster" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043970 "histone H3-K9
acetylation" evidence=IMP] [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014297 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0000124
GeneTree:ENSGT00700000104377 KO:K03130 HSSP:Q02793 EMBL:AY118904
RefSeq:NP_651136.1 UniGene:Dm.13737 SMR:Q9VCN9 STRING:Q9VCN9
EnsemblMetazoa:FBtr0084387 GeneID:42750 KEGG:dme:Dmel_CG4448
UCSC:CG4448-RA CTD:42750 FlyBase:FBgn0039067 InParanoid:Q9VCN9
OMA:LWCATSG OrthoDB:EOG49W0WQ GenomeRNAi:42750 NextBio:830376
Uniprot:Q9VCN9
Length = 743
Score = 378 (138.1 bits), Expect = 5.7e-38, Sum P(3) = 5.7e-38
Identities = 77/220 (35%), Positives = 115/220 (52%)
Query: 456 LVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGY 515
L GH V + FS L+ S S+D T+R W C +Y+ H +P+W + SP G
Sbjct: 493 LRGHTKGVTDVRFSAHYPLMYSVSKDATMRCWRAHNLHCAAIYRSHNYPIWCLDESPVGQ 552
Query: 516 YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT 575
Y + D ARLW+ + H L ++ GH DV+CV FHPN NY+ATGS+D ++RLW +
Sbjct: 553 YVVTGSKDLSARLWSLEKEHALIIYAGHTQDVECVAFHPNGNYIATGSADHSVRLWCATS 612
Query: 576 GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALC 635
G +R+ + V L+FS G+ LA+AG + V ++DL+ + +L
Sbjct: 613 GKLMRVFADCRQAVTQLAFSPDGKMLAAAGEETKVRIFDLAAGAQLAELKDHSASISSLS 672
Query: 636 FSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSA 675
+S LA++ D +++LWD KLS S SA
Sbjct: 673 WSTHNRHLATACSDGTLRLWDIKKLSPMSDNSSAGSSSSA 712
Score = 237 (88.5 bits), Expect = 1.9e-21, Sum P(3) = 1.9e-21
Identities = 53/177 (29%), Positives = 83/177 (46%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +R N H P+ L SP +++ S+D + RLWSL L++Y
Sbjct: 518 DATMRCWRAHNLHCAAIYRSHNYPIWCLDESPVGQYVVTGSKDLSARLWSLEKEHALIIY 577
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
GH V + F P+G Y A+ D RLW S +R+F V + F P+
Sbjct: 578 AGHTQDVECVAFHPNGNYIATGSADHSVRLWCATSGKLMRVFADCRQAVTQLAFSPDGKM 637
Query: 559 VATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
+A + +R++D G+ + L H A + +LS+S R LA+A DG + +WD+
Sbjct: 638 LAAAGEETKVRIFDLAAGAQLAELKDHSASISSLSWSTHNRHLATACSDGTLRLWDI 694
Score = 104 (41.7 bits), Expect = 6.2e-07, Sum P(3) = 6.2e-07
Identities = 25/99 (25%), Positives = 43/99 (43%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D VR+ + + R V +L+FSPD +L + ++ +R++ L L
Sbjct: 602 DHSVRLWCATSGKLMRVFADCRQAVTQLAFSPDGKMLAAAGEETKVRIFDLAAGAQLAEL 661
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPL 537
K H + + +S H + A+A D RLW P+
Sbjct: 662 KDHSASISSLSWSTHNRHLATACSDGTLRLWDIKKLSPM 700
Score = 83 (34.3 bits), Expect = 9.9e-05, Sum P(3) = 9.9e-05
Identities = 31/114 (27%), Positives = 50/114 (43%)
Query: 388 QQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAM-----KSSDQLQ---DIEMEC-- 437
Q V C + + +A G ++ ++LW KL + ++ QL D +M
Sbjct: 582 QDVECVAFHPNGNYIATGSADHSVRLWCATSGKLMRVFADCRQAVTQLAFSPDGKMLAAA 641
Query: 438 -DDILVRIMDERNAETTRTLVGHEGPVRKLSFSP-DRSLLLSCSQDNTIRLWSL 489
++ VRI D L H + LS+S +R L +CS D T+RLW +
Sbjct: 642 GEETKVRIFDLAAGAQLAELKDHSASISSLSWSTHNRHLATACS-DGTLRLWDI 694
Score = 74 (31.1 bits), Expect = 5.7e-38, Sum P(3) = 5.7e-38
Identities = 38/224 (16%), Positives = 89/224 (39%)
Query: 205 HYQEDLRKLSSVTKRDQIRTNEIAETFRSTEFIIRMSRDTLSLLKRHLQEKKHTVLLNIV 264
++ ++ LS T+ + +++ FRS+++ + + ++ + +LQ + H +++N++
Sbjct: 204 YFMRLVQTLSGYTRLEAAESDDTVAHFRSSKYELHTTAVVVNRICAYLQRRGHVLIMNLL 263
Query: 265 QEHLYFDMYEGE--ATRQDNKAKIYYGMPREPDLQNTIAVXXXXXXXXXXXXXXXXXXXX 322
L+ + E E A +D+ + + E + ++
Sbjct: 264 YTWLHVHIVENEQRAFSEDHLLGLTDDLEGEDGEDDVVSKPAVTLNTRGDIRPSKSLTEK 323
Query: 323 XXXSMFSKKTKSDPNAPPVDRIPLPPLKD-SEKIDKLK--------ALREATKRVTLGPE 373
K+ +PN I D S ++ KL+ L+ AT+++
Sbjct: 324 SNR----KRPAEEPNIMLETDIKQEVETDESAELSKLQLNIDACLDTLKSATEQILKSQV 379
Query: 374 SLPSIACYTLLNARQQ-VTCAEISEDVSILAVGFSESYIKLWSL 416
LP + ++ R + +T A + + GF S ++LW L
Sbjct: 380 ELPR---FLRISERSRGLTSAHLDPSECHMLAGFDNSAVQLWQL 420
Score = 65 (27.9 bits), Expect = 5.7e-38, Sum P(3) = 5.7e-38
Identities = 30/140 (21%), Positives = 54/140 (38%)
Query: 71 YHTPPPSQTSKQSGKAPDKNTLITMLK--LLRQYNLRGTEE---------QLKKEINVND 119
Y +++S S K KN L+ LL+Q N E Q K++ VN
Sbjct: 17 YSNSNNNKSSASSKKTSSKNDLLRCAVGLLLKQKNYVSNERFRRSDFLLLQNKQQFAVNK 76
Query: 120 -LGIDPNDSEIGDLLSAYESEGDPNLYEDAYQDLKKFIENSLDVYKYELGLVLYPVLVHM 178
L D + + + + + + +F+E + + E+ P+L H
Sbjct: 77 MLDTDLHGGNSFTFSNVQVITNNQHTVDQQFGRFSQFVEAQAEPLRLEMKRFYGPMLCHF 136
Query: 179 YIELVYNGHEHQATEMLHKH 198
Y++L+ A E+L K+
Sbjct: 137 YLDLLKAREPRGAVELLRKY 156
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 330 (121.2 bits), Expect = 4.7e-29, P = 4.7e-29
Identities = 78/222 (35%), Positives = 106/222 (47%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
DD V + ++ L GH GPV+ FSPD L+ S S D++IRLW + +CL V
Sbjct: 46 DDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHV 105
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
KGH V + FSP AS G D+ A +W S + L VGH + F P S+
Sbjct: 106 LKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSD 165
Query: 558 YVATGSSDRTIRLWDCVTGSHV---RLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+ATGS D T+ +WD + V L GH + L +S G LAS D + +W
Sbjct: 166 SLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASG-LLASGSWDKTICVWK 224
Query: 615 LSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ V +L FS D LAS+G +VK+WD
Sbjct: 225 PTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWD 266
Score = 269 (99.8 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 65/200 (32%), Positives = 89/200 (44%)
Query: 459 HEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFA 518
H G V +FSPD LL+ S D + +W R L GH PV FSP G A
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIA 84
Query: 519 SAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH 578
S+ D RLW L + GH V+ V F P+S +A+G D+ +W+ +G
Sbjct: 85 SSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRR 144
Query: 579 VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXX---XXXXXXXXXDVVRALC 635
V LL GH + + FS LA+ D VH+WDL + LC
Sbjct: 145 VHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLC 204
Query: 636 FSRDGNILASSGQDCSVKLW 655
+S G +LAS D ++ +W
Sbjct: 205 YSASG-LLASGSWDKTICVW 223
Score = 226 (84.6 bits), Expect = 8.4e-18, P = 8.4e-18
Identities = 75/263 (28%), Positives = 110/263 (41%)
Query: 391 TCAEISEDVSILAVGFSESYIKLWSLVPQK--LKAMKSSDQLQDIEMECDDILVRIMDER 448
T S+D + G + LW L + +K+ S + I D +R+ D
Sbjct: 40 TLLTASDDGCVYVWGTKSGRL-LWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVA 98
Query: 449 NAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDI 508
++ L GH+ V +SFSPD L S D +W + R + + GH +
Sbjct: 99 RSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSS 158
Query: 509 KFSPHGYYFASAGHDRMARLW----ATD--SYHPLRLFVGHYSDVDCVQFHPNSNYVATG 562
FSP A+ D +W +T SYH L GH ++ C+ + S +A+G
Sbjct: 159 DFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLE---GHTGNISCLCYSA-SGLLASG 214
Query: 563 SSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXX 622
S D+TI +W T + L GH V +L+FS LASAG V +WD
Sbjct: 215 SWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLE 274
Query: 623 XXXXXXDVVRALCFSRDGNILAS 645
DV A F+ DG +L S
Sbjct: 275 TLKGMLDVAHACIFTPDGKLLVS 297
Score = 204 (76.9 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 52/175 (29%), Positives = 78/175 (44%)
Query: 510 FSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIR 569
FSP G +A D +W T S L GH V F P+ +A+ SSD +IR
Sbjct: 34 FSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIR 93
Query: 570 LWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXD 629
LWD + +L GH+ V +SFS + LAS G D +W++ + D
Sbjct: 94 LWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCD 153
Query: 630 VVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAY 684
+++ FS + LA+ D +V +WD + V + H+ +I S L Y
Sbjct: 154 SIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLE-GHTGNI--SCLCY 205
Score = 184 (69.8 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 62/238 (26%), Positives = 105/238 (44%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK-LKAMKSSDQ-LQDIEMECD 438
+ L R V S D ++A S+ I+LW + K L +K + ++ + D
Sbjct: 62 WRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPD 121
Query: 439 ---------DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL 489
D + + ++ LVGH ++ FSP L + S D+T+ +W L
Sbjct: 122 SKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDL 181
Query: 490 LLWRCLVVY---KGHGHPVWDIKFSPHGYYFASAGHDRMARLWA-TDSYHPLRLFVGHYS 545
+V Y +GH + + +S G AS D+ +W T + PL+L GH
Sbjct: 182 RASTPVVSYHNLEGHTGNISCLCYSASGL-LASGSWDKTICVWKPTTNNLPLQL-KGHTI 239
Query: 546 DVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLAS 603
V+ + F P+ +A+ RT+++WDC+TG + L G +A F+ G+ L S
Sbjct: 240 WVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACIFTPDGKLLVS 297
Score = 171 (65.3 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 35/120 (29%), Positives = 58/120 (48%)
Query: 537 LRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSV 596
+R + H+ +V+C F P+ + T S D + +W +G + L GH+ PV + FS
Sbjct: 19 VRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSP 78
Query: 597 CGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
GR +AS+ D ++ +WD++ V + FS D LAS G D +W+
Sbjct: 79 DGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWE 138
Score = 133 (51.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 29/81 (35%), Positives = 41/81 (50%)
Query: 579 VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSR 638
VR H V +FS GR L +A DG V++W + V++ CFS
Sbjct: 19 VRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSP 78
Query: 639 DGNILASSGQDCSVKLWDFAK 659
DG ++ASS D S++LWD A+
Sbjct: 79 DGRLIASSSSDHSIRLWDVAR 99
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 354 (129.7 bits), Expect = 9.9e-29, P = 9.9e-29
Identities = 81/231 (35%), Positives = 113/231 (48%)
Query: 426 SSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIR 485
S D Q + DD V+I D E +TL GH G V L+FSPD LL S S DNTI
Sbjct: 759 SPDGKQLVSGSYDDT-VKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTID 817
Query: 486 LWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYS 545
LW L ++GH H +W + F+P G ASA D ++W + + H
Sbjct: 818 LWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQ 877
Query: 546 DVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAG 605
V V F P+ +A+ S D TI++W+ TG + L G V +++FS G+ LAS
Sbjct: 878 SVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGS 937
Query: 606 GDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
V +W+ + VR++ FS DG LASS D ++KLW+
Sbjct: 938 EKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWN 988
Score = 347 (127.2 bits), Expect = 9.8e-27, Sum P(2) = 9.8e-27
Identities = 90/288 (31%), Positives = 131/288 (45%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKL-----------KAMKSSDQL 430
TL + Q V S D +LA +S IK+W+ +L K++ S
Sbjct: 871 TLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDG 930
Query: 431 QDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL 490
+ + + V++ + E +TL GH VR ++FSPD L S S D TI+LW+
Sbjct: 931 KKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNST 990
Query: 491 LWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCV 550
+KGH + + FSP G + S D +LW + + H V V
Sbjct: 991 TGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAV 1050
Query: 551 QFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNV 610
F P+ +A+ S D TI+LWD TG R L GH V +++FS G+ LAS DG +
Sbjct: 1051 AFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTI 1110
Query: 611 HMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFA 658
+W+ D V ++ FS DG LAS D ++KLWD A
Sbjct: 1111 KLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSA 1158
Score = 339 (124.4 bits), Expect = 4.4e-27, P = 4.4e-27
Identities = 85/274 (31%), Positives = 125/274 (45%)
Query: 396 SEDVSILAVGFSESYIKLWSLV-----------PQKLKAMKSSDQLQDIEMECDDILVRI 444
S D +LA G ++ I LW P + ++ + +++ DD ++I
Sbjct: 801 SPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKI 860
Query: 445 MDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHP 504
D E +TL H VR ++FSPD LL S S D+TI++W+ +G
Sbjct: 861 WDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGW 920
Query: 505 VWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSS 564
V + FSP G AS +LW + L+ GH V V F P+ +A+ SS
Sbjct: 921 VKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSS 980
Query: 565 DRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXX 624
D TI+LW+ TG + GH + A++FS G+ L S D + +WDL+
Sbjct: 981 DTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSL 1040
Query: 625 XXXXDVVRALCFSRDGNILASSGQDCSVKLWDFA 658
V A+ FS D LASS D ++KLWD A
Sbjct: 1041 EDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSA 1074
Score = 332 (121.9 bits), Expect = 4.7e-25, Sum P(2) = 4.7e-25
Identities = 88/286 (30%), Positives = 129/286 (45%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKL-----------KAMKSSDQL 430
TL Q V S D LA S++ IKLW+ +L +A+ S
Sbjct: 955 TLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDG 1014
Query: 431 QDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL 490
+ + DD +++ D +E ++L H V ++FSPD L S S D+TI+LW
Sbjct: 1015 KHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSA 1074
Query: 491 LWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCV 550
+GH V + FSP G AS +D +LW + + G VD V
Sbjct: 1075 TGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSV 1134
Query: 551 QFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNV 610
F P+ +A+G D TI+LWD TG ++ L GH + ++ FS G+ LAS D
Sbjct: 1135 AFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTA 1194
Query: 611 HMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+WD + V ++ FS DG +LASS ++KLWD
Sbjct: 1195 KLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWD 1240
Score = 329 (120.9 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 84/278 (30%), Positives = 132/278 (47%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWS-----LVP------QKLKAMKSSDQLQDIEMECD 438
V S D LA G ++ +KLW+ L+ Q ++++ S + +
Sbjct: 921 VKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSS 980
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +++ + E +T GH+ +R ++FSPD L+S S DNTI+LW L
Sbjct: 981 DTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSL 1040
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
+ H V + FSP AS+ D +LW + + R GH V V F P+
Sbjct: 1041 EDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKL 1100
Query: 559 VATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNX 618
+A+ S D TI+LW+ +TG + LTG V +++FS G+ LAS D + +WD +
Sbjct: 1101 LASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATG 1160
Query: 619 XXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
D ++++ FS DG +LAS D + KLWD
Sbjct: 1161 ELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWD 1198
Score = 325 (119.5 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 85/278 (30%), Positives = 126/278 (45%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQKLK-----------AMKSSDQLQDIEMECD 438
+ S D L G ++ IKLW L +L+ A+ S + +
Sbjct: 1005 IRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSL 1064
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +++ D E RTL GH VR ++FSPD LL S S D TI+LW+ L
Sbjct: 1065 DSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTL 1124
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
G V + FSP G AS +D +LW + + L+ GH + V F P+
Sbjct: 1125 TGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKL 1184
Query: 559 VATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNX 618
+A+GS D+T +LWD TG +++ GH V +++FS G+ LAS+ + +WD
Sbjct: 1185 LASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTG 1244
Query: 619 XXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ ++ FS DGN LAS K+WD
Sbjct: 1245 ELLQTLNDPDESAGSVAFSPDGNRLASV-DIFDTKIWD 1281
Score = 313 (115.2 bits), Expect = 3.1e-24, P = 3.1e-24
Identities = 71/216 (32%), Positives = 108/216 (50%)
Query: 441 LVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKG 500
L ++ +AE +TL H GPV + FSPD L+S S D+T+++W L G
Sbjct: 732 LPKVEQTWSAEQ-QTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDG 790
Query: 501 HGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVA 560
H V + FSP G AS +D LW + + L+ F GH + V F P+ +A
Sbjct: 791 HSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELA 850
Query: 561 TGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXX 620
+ S D TI++WD TG + L H V +++FS G+ LAS+ D + +W+ +
Sbjct: 851 SASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGEL 910
Query: 621 XXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
V+++ FS DG LAS + +VKLW+
Sbjct: 911 QQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWN 946
Score = 213 (80.0 bits), Expect = 5.3e-12, Sum P(2) = 5.3e-12
Identities = 62/221 (28%), Positives = 97/221 (43%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKS--SDQLQDIEMECD- 438
TL Q V S D +LA + IKLW+ + +L+ + SD + + D
Sbjct: 1081 TLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDG 1140
Query: 439 --------DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL 490
D +++ D E +TL GH ++ + FSPD LL S S D T +LW
Sbjct: 1141 KQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPA 1200
Query: 491 LWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCV 550
L +++GH V + FSP G AS+ + +LW + L+ V
Sbjct: 1201 TGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSV 1260
Query: 551 QFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYA 591
F P+ N +A+ T ++WD TG ++ L GH V++
Sbjct: 1261 AFSPDGNRLASVDIFDT-KIWDPATGELLQALKGHSKWVWS 1300
Score = 203 (76.5 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 50/178 (28%), Positives = 88/178 (49%)
Query: 508 IKFSPHG------YYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVAT 561
+ FSP G + + +G ++ ++ T S L H V+ V F P+ + +
Sbjct: 709 LMFSPEGSITRRIFNYNLSGWSQLPKVEQTWSAEQQTL-ENHLGPVESVVFSPDGKQLVS 767
Query: 562 GSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXX 621
GS D T+++WD TG ++ L GH V +L+FS G+ LAS D + +WD +
Sbjct: 768 GSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELL 827
Query: 622 XXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKN 679
+ ++ F+ DG LAS+ D ++K+WD A + E+ ++ SHS +++
Sbjct: 828 QTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLA--TGEL--QQTLDSHSQSVRS 881
Score = 38 (18.4 bits), Expect = 9.8e-27, Sum P(2) = 9.8e-27
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 119 DLGIDPNDSEIGDLLSAYESEGDPN 143
D ID DS G+LL +E G P+
Sbjct: 813 DNTIDLWDSATGELLQTFE--GHPH 835
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 313 (115.2 bits), Expect = 3.3e-27, P = 3.3e-27
Identities = 84/298 (28%), Positives = 141/298 (47%)
Query: 376 PSIAC-YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQL--QD 432
P+ A +TL + V+ + S + LA ++ IK+W K + S +L D
Sbjct: 7 PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 66
Query: 433 IEMECD-DILV--------RIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNT 483
+ D ++LV +I D + + +TL GH V +F+P +L++S S D +
Sbjct: 67 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 126
Query: 484 IRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGH 543
+R+W + +CL H PV + F+ G S+ +D + R+W T S L+ +
Sbjct: 127 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 186
Query: 544 YSD-VDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYAL--SFSVCG-R 599
+ V V+F PN Y+ + D T++LWD G ++ TGHK Y + +FSV G +
Sbjct: 187 DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK 246
Query: 600 FLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSG--QDCSVKLW 655
++ S D V++W+L DVV + NI+AS+ D ++KLW
Sbjct: 247 WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 304
Score = 282 (104.3 bits), Expect = 7.6e-24, P = 7.6e-24
Identities = 62/206 (30%), Positives = 100/206 (48%)
Query: 455 TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG 514
TL GH V + FSP+ L S S D I++W + GH + D+ +S
Sbjct: 14 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 73
Query: 515 YYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCV 574
SA D+ ++W S L+ GH + V C F+P SN + +GS D ++R+WD
Sbjct: 74 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 133
Query: 575 TGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDV-VRA 633
TG ++ L H PV A+ F+ G + S+ DG +WD ++ + V
Sbjct: 134 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 193
Query: 634 LCFSRDGNILASSGQDCSVKLWDFAK 659
+ FS +G + ++ D ++KLWD++K
Sbjct: 194 VKFSPNGKYILAATLDNTLKLWDYSK 219
Score = 243 (90.6 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 56/222 (25%), Positives = 103/222 (46%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D L++I + + +T+ GH+ + +++S D +LL+S S D T+++W + +CL
Sbjct: 40 DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL 99
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
KGH + V+ F+P S D R+W + L+ H V V F+ + +
Sbjct: 100 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSL 159
Query: 559 VATGSSDRTIRLWDCVTGSHVR-LLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
+ + S D R+WD +G ++ L+ PV + FS G+++ +A D + +WD S
Sbjct: 160 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK 219
Query: 618 XXXXXXXXXXXDVVRALC--FS-RDGNILASSGQDCSVKLWD 656
+ + FS G + S +D V +W+
Sbjct: 220 GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 261
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 313 (115.2 bits), Expect = 3.3e-27, P = 3.3e-27
Identities = 84/298 (28%), Positives = 141/298 (47%)
Query: 376 PSIAC-YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQL--QD 432
P+ A +TL + V+ + S + LA ++ IK+W K + S +L D
Sbjct: 33 PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 92
Query: 433 IEMECD-DILV--------RIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNT 483
+ D ++LV +I D + + +TL GH V +F+P +L++S S D +
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 484 IRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGH 543
+R+W + +CL H PV + F+ G S+ +D + R+W T S L+ +
Sbjct: 153 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 212
Query: 544 YSD-VDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYAL--SFSVCG-R 599
+ V V+F PN Y+ + D T++LWD G ++ TGHK Y + +FSV G +
Sbjct: 213 DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK 272
Query: 600 FLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSG--QDCSVKLW 655
++ S D V++W+L DVV + NI+AS+ D ++KLW
Sbjct: 273 WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 282 (104.3 bits), Expect = 7.6e-24, P = 7.6e-24
Identities = 62/206 (30%), Positives = 100/206 (48%)
Query: 455 TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG 514
TL GH V + FSP+ L S S D I++W + GH + D+ +S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 515 YYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCV 574
SA D+ ++W S L+ GH + V C F+P SN + +GS D ++R+WD
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 575 TGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDV-VRA 633
TG ++ L H PV A+ F+ G + S+ DG +WD ++ + V
Sbjct: 160 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 219
Query: 634 LCFSRDGNILASSGQDCSVKLWDFAK 659
+ FS +G + ++ D ++KLWD++K
Sbjct: 220 VKFSPNGKYILAATLDNTLKLWDYSK 245
Score = 243 (90.6 bits), Expect = 4.9e-19, P = 4.9e-19
Identities = 56/222 (25%), Positives = 103/222 (46%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D L++I + + +T+ GH+ + +++S D +LL+S S D T+++W + +CL
Sbjct: 66 DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL 125
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
KGH + V+ F+P S D R+W + L+ H V V F+ + +
Sbjct: 126 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSL 185
Query: 559 VATGSSDRTIRLWDCVTGSHVR-LLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
+ + S D R+WD +G ++ L+ PV + FS G+++ +A D + +WD S
Sbjct: 186 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK 245
Query: 618 XXXXXXXXXXXDVVRALC--FS-RDGNILASSGQDCSVKLWD 656
+ + FS G + S +D V +W+
Sbjct: 246 GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 313 (115.2 bits), Expect = 3.3e-27, P = 3.3e-27
Identities = 84/298 (28%), Positives = 141/298 (47%)
Query: 376 PSIAC-YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQL--QD 432
P+ A +TL + V+ + S + LA ++ IK+W K + S +L D
Sbjct: 33 PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 92
Query: 433 IEMECD-DILV--------RIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNT 483
+ D ++LV +I D + + +TL GH V +F+P +L++S S D +
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 484 IRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGH 543
+R+W + +CL H PV + F+ G S+ +D + R+W T S L+ +
Sbjct: 153 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 212
Query: 544 YSD-VDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYAL--SFSVCG-R 599
+ V V+F PN Y+ + D T++LWD G ++ TGHK Y + +FSV G +
Sbjct: 213 DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK 272
Query: 600 FLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSG--QDCSVKLW 655
++ S D V++W+L DVV + NI+AS+ D ++KLW
Sbjct: 273 WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 282 (104.3 bits), Expect = 7.6e-24, P = 7.6e-24
Identities = 62/206 (30%), Positives = 100/206 (48%)
Query: 455 TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG 514
TL GH V + FSP+ L S S D I++W + GH + D+ +S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 515 YYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCV 574
SA D+ ++W S L+ GH + V C F+P SN + +GS D ++R+WD
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 575 TGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDV-VRA 633
TG ++ L H PV A+ F+ G + S+ DG +WD ++ + V
Sbjct: 160 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 219
Query: 634 LCFSRDGNILASSGQDCSVKLWDFAK 659
+ FS +G + ++ D ++KLWD++K
Sbjct: 220 VKFSPNGKYILAATLDNTLKLWDYSK 245
Score = 243 (90.6 bits), Expect = 4.9e-19, P = 4.9e-19
Identities = 56/222 (25%), Positives = 103/222 (46%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D L++I + + +T+ GH+ + +++S D +LL+S S D T+++W + +CL
Sbjct: 66 DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL 125
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
KGH + V+ F+P S D R+W + L+ H V V F+ + +
Sbjct: 126 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSL 185
Query: 559 VATGSSDRTIRLWDCVTGSHVR-LLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
+ + S D R+WD +G ++ L+ PV + FS G+++ +A D + +WD S
Sbjct: 186 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK 245
Query: 618 XXXXXXXXXXXDVVRALC--FS-RDGNILASSGQDCSVKLWD 656
+ + FS G + S +D V +W+
Sbjct: 246 GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 313 (115.2 bits), Expect = 3.3e-27, P = 3.3e-27
Identities = 84/298 (28%), Positives = 141/298 (47%)
Query: 376 PSIAC-YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQL--QD 432
P+ A +TL + V+ + S + LA ++ IK+W K + S +L D
Sbjct: 33 PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 92
Query: 433 IEMECD-DILV--------RIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNT 483
+ D ++LV +I D + + +TL GH V +F+P +L++S S D +
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 484 IRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGH 543
+R+W + +CL H PV + F+ G S+ +D + R+W T S L+ +
Sbjct: 153 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 212
Query: 544 YSD-VDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYAL--SFSVCG-R 599
+ V V+F PN Y+ + D T++LWD G ++ TGHK Y + +FSV G +
Sbjct: 213 DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK 272
Query: 600 FLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSG--QDCSVKLW 655
++ S D V++W+L DVV + NI+AS+ D ++KLW
Sbjct: 273 WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 282 (104.3 bits), Expect = 7.6e-24, P = 7.6e-24
Identities = 62/206 (30%), Positives = 100/206 (48%)
Query: 455 TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG 514
TL GH V + FSP+ L S S D I++W + GH + D+ +S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 515 YYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCV 574
SA D+ ++W S L+ GH + V C F+P SN + +GS D ++R+WD
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 575 TGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDV-VRA 633
TG ++ L H PV A+ F+ G + S+ DG +WD ++ + V
Sbjct: 160 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 219
Query: 634 LCFSRDGNILASSGQDCSVKLWDFAK 659
+ FS +G + ++ D ++KLWD++K
Sbjct: 220 VKFSPNGKYILAATLDNTLKLWDYSK 245
Score = 243 (90.6 bits), Expect = 4.9e-19, P = 4.9e-19
Identities = 56/222 (25%), Positives = 103/222 (46%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D L++I + + +T+ GH+ + +++S D +LL+S S D T+++W + +CL
Sbjct: 66 DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL 125
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
KGH + V+ F+P S D R+W + L+ H V V F+ + +
Sbjct: 126 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSL 185
Query: 559 VATGSSDRTIRLWDCVTGSHVR-LLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
+ + S D R+WD +G ++ L+ PV + FS G+++ +A D + +WD S
Sbjct: 186 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK 245
Query: 618 XXXXXXXXXXXDVVRALC--FS-RDGNILASSGQDCSVKLWD 656
+ + FS G + S +D V +W+
Sbjct: 246 GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 313 (115.2 bits), Expect = 3.3e-27, P = 3.3e-27
Identities = 84/298 (28%), Positives = 141/298 (47%)
Query: 376 PSIAC-YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQL--QD 432
P+ A +TL + V+ + S + LA ++ IK+W K + S +L D
Sbjct: 33 PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 92
Query: 433 IEMECD-DILV--------RIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNT 483
+ D ++LV +I D + + +TL GH V +F+P +L++S S D +
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 484 IRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGH 543
+R+W + +CL H PV + F+ G S+ +D + R+W T S L+ +
Sbjct: 153 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 212
Query: 544 YSD-VDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYAL--SFSVCG-R 599
+ V V+F PN Y+ + D T++LWD G ++ TGHK Y + +FSV G +
Sbjct: 213 DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK 272
Query: 600 FLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSG--QDCSVKLW 655
++ S D V++W+L DVV + NI+AS+ D ++KLW
Sbjct: 273 WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 282 (104.3 bits), Expect = 7.6e-24, P = 7.6e-24
Identities = 62/206 (30%), Positives = 100/206 (48%)
Query: 455 TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG 514
TL GH V + FSP+ L S S D I++W + GH + D+ +S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 515 YYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCV 574
SA D+ ++W S L+ GH + V C F+P SN + +GS D ++R+WD
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 575 TGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDV-VRA 633
TG ++ L H PV A+ F+ G + S+ DG +WD ++ + V
Sbjct: 160 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 219
Query: 634 LCFSRDGNILASSGQDCSVKLWDFAK 659
+ FS +G + ++ D ++KLWD++K
Sbjct: 220 VKFSPNGKYILAATLDNTLKLWDYSK 245
Score = 243 (90.6 bits), Expect = 4.9e-19, P = 4.9e-19
Identities = 56/222 (25%), Positives = 103/222 (46%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D L++I + + +T+ GH+ + +++S D +LL+S S D T+++W + +CL
Sbjct: 66 DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL 125
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
KGH + V+ F+P S D R+W + L+ H V V F+ + +
Sbjct: 126 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSL 185
Query: 559 VATGSSDRTIRLWDCVTGSHVR-LLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
+ + S D R+WD +G ++ L+ PV + FS G+++ +A D + +WD S
Sbjct: 186 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK 245
Query: 618 XXXXXXXXXXXDVVRALC--FS-RDGNILASSGQDCSVKLWD 656
+ + FS G + S +D V +W+
Sbjct: 246 GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 313 (115.2 bits), Expect = 3.3e-27, P = 3.3e-27
Identities = 84/298 (28%), Positives = 141/298 (47%)
Query: 376 PSIAC-YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQL--QD 432
P+ A +TL + V+ + S + LA ++ IK+W K + S +L D
Sbjct: 33 PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 92
Query: 433 IEMECD-DILV--------RIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNT 483
+ D ++LV +I D + + +TL GH V +F+P +L++S S D +
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 484 IRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGH 543
+R+W + +CL H PV + F+ G S+ +D + R+W T S L+ +
Sbjct: 153 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 212
Query: 544 YSD-VDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYAL--SFSVCG-R 599
+ V V+F PN Y+ + D T++LWD G ++ TGHK Y + +FSV G +
Sbjct: 213 DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK 272
Query: 600 FLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSG--QDCSVKLW 655
++ S D V++W+L DVV + NI+AS+ D ++KLW
Sbjct: 273 WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 282 (104.3 bits), Expect = 7.6e-24, P = 7.6e-24
Identities = 62/206 (30%), Positives = 100/206 (48%)
Query: 455 TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG 514
TL GH V + FSP+ L S S D I++W + GH + D+ +S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 515 YYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCV 574
SA D+ ++W S L+ GH + V C F+P SN + +GS D ++R+WD
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 575 TGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDV-VRA 633
TG ++ L H PV A+ F+ G + S+ DG +WD ++ + V
Sbjct: 160 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 219
Query: 634 LCFSRDGNILASSGQDCSVKLWDFAK 659
+ FS +G + ++ D ++KLWD++K
Sbjct: 220 VKFSPNGKYILAATLDNTLKLWDYSK 245
Score = 243 (90.6 bits), Expect = 4.9e-19, P = 4.9e-19
Identities = 56/222 (25%), Positives = 103/222 (46%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D L++I + + +T+ GH+ + +++S D +LL+S S D T+++W + +CL
Sbjct: 66 DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL 125
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
KGH + V+ F+P S D R+W + L+ H V V F+ + +
Sbjct: 126 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSL 185
Query: 559 VATGSSDRTIRLWDCVTGSHVR-LLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
+ + S D R+WD +G ++ L+ PV + FS G+++ +A D + +WD S
Sbjct: 186 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK 245
Query: 618 XXXXXXXXXXXDVVRALC--FS-RDGNILASSGQDCSVKLWD 656
+ + FS G + S +D V +W+
Sbjct: 246 GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 311 (114.5 bits), Expect = 5.4e-27, P = 5.4e-27
Identities = 86/302 (28%), Positives = 141/302 (46%)
Query: 372 PESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK----LKAMKS- 426
P++ I YTL + ++ + S D LA ++ IK+W K L+ K
Sbjct: 31 PQTPNYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEG 90
Query: 427 -SDQL--QDIEMEC---DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQ 480
SD QD ++ C DD ++I D + + +TL GH+ V +SF+P +L++S S
Sbjct: 91 ISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSF 150
Query: 481 DNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLR-L 539
D +R+W + C + H PV + F+ G S +D R+W T + L +
Sbjct: 151 DENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTI 210
Query: 540 FVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH-VRLLTGHKAPVYAL--SFSV 596
+V V+F PN +V G+ D T+RLW ++ TGHK Y + +FSV
Sbjct: 211 STEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSV 270
Query: 597 -CGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSG--QDCSVK 653
CG+++ + D +++++L DVV + NI+AS +D SVK
Sbjct: 271 TCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALEKDRSVK 330
Query: 654 LW 655
+W
Sbjct: 331 IW 332
Score = 271 (100.5 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 59/204 (28%), Positives = 95/204 (46%)
Query: 455 TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG 514
TL GH + + FSPD L S S D TI++W + +GH + DI +S
Sbjct: 41 TLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDS 100
Query: 515 YYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCV 574
SA D+ ++W +S ++ GH V V F+P SN + +GS D +R+WD
Sbjct: 101 KLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVN 160
Query: 575 TGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDV-VRA 633
TG ++++ H PV + F+ G + S DG V +WD + V
Sbjct: 161 TGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSF 220
Query: 634 LCFSRDGNILASSGQDCSVKLWDF 657
+ FS +G + + D +++LW +
Sbjct: 221 VKFSPNGKFVLAGTLDNTLRLWSY 244
Score = 261 (96.9 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 52/172 (30%), Positives = 87/172 (50%)
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
KGH + +KFSP G + ASA D+ ++W R GH + + + +S
Sbjct: 43 KGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKL 102
Query: 559 VATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNX 618
+ + S D+TI++WD +G V+ L GHK V+ +SF+ + S D NV +WD++
Sbjct: 103 ICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTG 162
Query: 619 XXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFA--KLSDEVGTEE 668
D V + F+RDG ++ S D +V++WD +L + + TE+
Sbjct: 163 ECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTED 214
Score = 237 (88.5 bits), Expect = 7.1e-18, P = 7.1e-18
Identities = 63/250 (25%), Positives = 115/250 (46%)
Query: 371 GPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVP--QKLKAMKSSD 428
GP S+ S + Y +QQ + + SI + +YI ++L + + ++K S
Sbjct: 4 GPASMSSSSSYLYQEQQQQ----QPQQTESIPQ---TPNYILKYTLKGHLKSISSVKFSP 56
Query: 429 QLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWS 488
+ + D ++I + + RTL GH+ + +++S D L+ S S D TI++W
Sbjct: 57 DGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWD 116
Query: 489 LLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVD 548
+ + + KGH V+ + F+P S D R+W ++ ++ H V
Sbjct: 117 VESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVT 176
Query: 549 CVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLL-TGHKAPVYALSFSVCGRFLASAGGD 607
V F+ + V +GS D T+R+WD TG + + T V + FS G+F+ + D
Sbjct: 177 GVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLD 236
Query: 608 GNVHMWDLSN 617
+ +W +N
Sbjct: 237 NTLRLWSYNN 246
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 244 (91.0 bits), Expect = 7.7e-18, P = 7.7e-18
Identities = 54/164 (32%), Positives = 81/164 (49%)
Query: 455 TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG 514
+L GH + ++ F P +L++S S+D TIR+W KGH V D+ F G
Sbjct: 103 SLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQG 162
Query: 515 YYFASAGHDRMARLWA-TDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
AS D +LW SY ++ GH +V V F P +YV + S DRTI++W+
Sbjct: 163 KLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEV 222
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
TG V+ TGH+ V + + G A+ D + +W L+N
Sbjct: 223 ATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVW-LTN 265
Score = 225 (84.3 bits), Expect = 7.8e-27, Sum P(2) = 7.8e-27
Identities = 47/135 (34%), Positives = 70/135 (51%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLL-WRCLV 496
+D +RI D E R+L GH V+ ++F LL SCS D +I+LW + C+
Sbjct: 128 EDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIK 187
Query: 497 VYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNS 556
GH H V + F P G Y SA DR ++W + + ++ + GH V V+ H
Sbjct: 188 TMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEG 247
Query: 557 NYVATGSSDRTIRLW 571
+ AT S+D+TIR+W
Sbjct: 248 SIFATCSNDQTIRVW 262
Score = 176 (67.0 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 33/99 (33%), Positives = 52/99 (52%)
Query: 475 LLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSY 534
L S S+D TIR+W + + CL+ GH + V + F P G Y SA D+ R+W +
Sbjct: 312 LASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNK 371
Query: 535 HPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
++ H + FH YV +GS D+T+++W+C
Sbjct: 372 RCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWEC 410
Score = 174 (66.3 bits), Expect = 6.4e-21, Sum P(2) = 6.4e-21
Identities = 48/189 (25%), Positives = 92/189 (48%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSE-SYIKLWSLVPQKL-KAMKS-SDQLQDIEME- 436
++L R +T I + L V SE + I++W + +++K +D +QD+ +
Sbjct: 102 FSLTGHRASITRV-IFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDA 160
Query: 437 -------CD-DILVRIMD-ERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLW 487
C D+ +++ D +++ E +T+ GH+ V ++F P +LS S+D TI++W
Sbjct: 161 QGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMW 220
Query: 488 SLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDV 547
+ C+ Y GH V ++ G FA+ +D+ R+W T+S H V
Sbjct: 221 EVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTV 280
Query: 548 DCVQFHPNS 556
+C+ + P +
Sbjct: 281 ECIAWAPEA 289
Score = 174 (66.3 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 37/118 (31%), Positives = 59/118 (50%)
Query: 542 GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFL 601
GH + + V FHP + + S D TIR+WD TG + R L GH V ++F G+ L
Sbjct: 106 GHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLL 165
Query: 602 ASAGGDGNVHMWDLSNXXXXXXXXXXXDV-VRALCFSRDGNILASSGQDCSVKLWDFA 658
AS D ++ +WD D V ++ F G+ + S+ +D ++K+W+ A
Sbjct: 166 ASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVA 223
Score = 161 (61.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 39/157 (24%), Positives = 70/157 (44%)
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + + F P SA D R+W ++ R GH V V F +
Sbjct: 106 GHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLL 165
Query: 560 ATGSSDRTIRLWDCVTGSH-VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNX 618
A+ S+D +I+LWD ++ + GH V +++F G ++ SA D + MW+++
Sbjct: 166 ASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATG 225
Query: 619 XXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
+ VR + +G+I A+ D ++++W
Sbjct: 226 YCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVW 262
Score = 149 (57.5 bits), Expect = 7.8e-27, Sum P(2) = 7.8e-27
Identities = 32/104 (30%), Positives = 51/104 (49%)
Query: 553 HPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHM 612
H ++A+GS D+TIR+WD G + L+GH V L+F G++L SA D + +
Sbjct: 306 HHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRV 365
Query: 613 WDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
WDL N ++ F + + S D +VK+W+
Sbjct: 366 WDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 409
Score = 133 (51.9 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 34/114 (29%), Positives = 49/114 (42%)
Query: 582 LTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGN 641
LTGH+A + + F + SA D + +WD D V+ + F G
Sbjct: 104 LTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGK 163
Query: 642 ILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYL-VRSYKTKAS 694
+LAS D S+KLWDF + E + H D SS+A++ Y AS
Sbjct: 164 LLASCSADLSIKLWDFQQ-----SYECIKTMHGHDHNVSSVAFVPAGDYVLSAS 212
Score = 130 (50.8 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 32/91 (35%), Positives = 41/91 (45%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +RI D TL GH+ VR L+F P L+S S D TIR+W L RC+
Sbjct: 318 DKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTL 377
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLW 529
H H I F Y S D+ ++W
Sbjct: 378 YAHQHFCTSIDFHKAHPYVISGSVDQTVKVW 408
Score = 128 (50.1 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 31/109 (28%), Positives = 49/109 (44%)
Query: 507 DIKFSPH-GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSD 565
D K H G + AS D+ R+W L GH + V + FHP Y+ + S D
Sbjct: 301 DNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDD 360
Query: 566 RTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+TIR+WD ++ L H+ ++ F ++ S D V +W+
Sbjct: 361 KTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 409
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 307 (113.1 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 68/207 (32%), Positives = 105/207 (50%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
+TL GH + + FS D +LL S S D T+ LWS + + Y+GH + D+ +S
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSD 96
Query: 514 GYYFASAGHDRMARLW-ATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWD 572
+Y SA D R+W A Y L++ GH + V CV F+P SN + +GS D TIR+W+
Sbjct: 97 SHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWE 156
Query: 573 CVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXX-XXXXXXXXXDVV 631
TG VR++ H P+ ++ F+ G + SA DG+ +WD V
Sbjct: 157 VKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAV 216
Query: 632 RALCFSRDGNILASSGQDCSVKLWDFA 658
FS +G + + D ++KL ++A
Sbjct: 217 SFAKFSPNGKFILVATLDSTLKLSNYA 243
Score = 292 (107.8 bits), Expect = 6.3e-25, P = 6.3e-25
Identities = 79/292 (27%), Positives = 136/292 (46%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKL--KAMKSSDQLQDIEME--- 436
TL ++C + S D ++LA + + LWS L + S + D+
Sbjct: 38 TLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDS 97
Query: 437 ---C---DDILVRIMDERNA-ETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL 489
C DD +RI D R+ E + L GH V ++F+P +L++S S D TIR+W +
Sbjct: 98 HYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEV 157
Query: 490 LLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSD-VD 548
+C+ + K H P+ + F+ G SA HD ++W L+ + S V
Sbjct: 158 KTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVS 217
Query: 549 CVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALS--FSVC-GRFLASAG 605
+F PN ++ + D T++L + TG +++ TGH V+ ++ FSV G+++ S
Sbjct: 218 FAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGS 277
Query: 606 GDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQ--DCSVKLW 655
D V++WDL D V ++ N ++SSG D ++++W
Sbjct: 278 EDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
Score = 213 (80.0 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 44/166 (26%), Positives = 83/166 (50%)
Query: 492 WRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQ 551
+R L +GH + +KFS G ASA D+ LW+ +Y + + GH S + +
Sbjct: 33 YRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLA 92
Query: 552 FHPNSNYVATGSSDRTIRLWDCVTGSH-VRLLTGHKAPVYALSFSVCGRFLASAGGDGNV 610
+ +S+Y + S D T+R+WD + +++L GH V+ ++F+ + S D +
Sbjct: 93 WSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETI 152
Query: 611 HMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+W++ + ++ F+RDG+++ S+ D S K+WD
Sbjct: 153 RIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWD 198
Score = 209 (78.6 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 51/204 (25%), Positives = 92/204 (45%)
Query: 458 GHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLL-WRCLVVYKGHGHPVWDIKFSPHGYY 516
GH + L++S D S S D T+R+W + CL V +GH + V+ + F+P
Sbjct: 83 GHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNL 142
Query: 517 FASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTG 576
S D R+W + +R+ H + V F+ + + + + S D + ++WD G
Sbjct: 143 IVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEG 202
Query: 577 SHVRLLTGHKAPVYALS-FSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRAL- 634
+ ++ L K+P + + FS G+F+ A D + + + + + V +
Sbjct: 203 TCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCIT 262
Query: 635 -CFS-RDGNILASSGQDCSVKLWD 656
FS +G + S +D V LWD
Sbjct: 263 SAFSVTNGKYIVSGSEDNCVYLWD 286
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 307 (113.1 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 80/292 (27%), Positives = 136/292 (46%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQL--QDIEMECD 438
+TL + V+ + S + LA ++ IK+W K + S +L D+ D
Sbjct: 66 FTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 125
Query: 439 D-ILVRIMDERN--------AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL 489
+LV D++ ++ +TL GH V +F+P +L++S S D ++R+W +
Sbjct: 126 SRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 185
Query: 490 LLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSD-VD 548
+CL H PV + F+ G S+ +D + R+W T S L+ + + V
Sbjct: 186 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 245
Query: 549 CVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYAL--SFSVCG-RFLASAG 605
V+F PN Y+ + D T++LWD G ++ TGHK Y + +FSV G +++ S
Sbjct: 246 FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGS 305
Query: 606 GDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSG--QDCSVKLW 655
D V++W+L + D V NI+AS+ D ++KLW
Sbjct: 306 EDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLW 357
Score = 274 (101.5 bits), Expect = 5.5e-23, P = 5.5e-23
Identities = 60/206 (29%), Positives = 99/206 (48%)
Query: 455 TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG 514
TL GH V + FSP+ L S S D I++W + GH + D+ +S
Sbjct: 67 TLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 126
Query: 515 YYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCV 574
S D+ ++W + L+ GH + V C F+P SN + +GS D ++R+WD
Sbjct: 127 RLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 186
Query: 575 TGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDV-VRA 633
TG ++ L H PV A+ F+ G + S+ DG +WD ++ + V
Sbjct: 187 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 246
Query: 634 LCFSRDGNILASSGQDCSVKLWDFAK 659
+ FS +G + ++ D ++KLWD++K
Sbjct: 247 VKFSPNGKYILAATLDNTLKLWDYSK 272
Score = 234 (87.4 bits), Expect = 5.0e-17, P = 5.0e-17
Identities = 59/240 (24%), Positives = 108/240 (45%)
Query: 421 LKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQ 480
+ A+K S + + D L++I + + +T+ GH+ + +++S D LL+S S
Sbjct: 75 VSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD 134
Query: 481 DNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLF 540
D T+++W L + L KGH + V+ F+P S D R+W + L+
Sbjct: 135 DKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL 194
Query: 541 VGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVR-LLTGHKAPVYALSFSVCGR 599
H V V F+ + + + + S D R+WD +G ++ L+ PV + FS G+
Sbjct: 195 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 254
Query: 600 FLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALC--FS-RDGNILASSGQDCSVKLWD 656
++ +A D + +WD S + + FS G + S +D V +W+
Sbjct: 255 YILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWN 314
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 290 (107.1 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 68/236 (28%), Positives = 118/236 (50%)
Query: 428 DQLQDIEMECDDILVRIMD-ERNAETTR--TLVGHEGPVRKLSFSPDRSLLLSCSQDNTI 484
DQ +E + + I RI + E ++ + TL GHE V +S SP++ + + S D TI
Sbjct: 19 DQKGVVEEDEEQIHKRIRNYESHSGFSEYCTLFGHEKSVTCVSVSPNKRWIATSSSDGTI 78
Query: 485 RLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHY 544
++WS L +R GH + +K++ Y ASA D+ R+W + +R GH
Sbjct: 79 KIWSALTFRLECTLFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHT 138
Query: 545 SDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASA 604
+ V + F+P + +GS D T+R+W+ G+ +R+L H P+ ++S S G A+A
Sbjct: 139 NYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATA 198
Query: 605 GGDGNVHMWDLSNXXXXXXXXXXXDV-VRALCFSRDGNILASSGQDCSVKLWDFAK 659
DG +WD+ + +V + L F+ + L S + ++LWD+ +
Sbjct: 199 SYDGMARIWDVLSGQCLKTLVEPINVPLSNLQFTENRKYLLVSNLNSQIRLWDYRR 254
Score = 239 (89.2 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 65/225 (28%), Positives = 104/225 (46%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKA-----------MKSSDQL 430
TL + VTC +S + +A S+ IK+WS + +L+ +K +
Sbjct: 49 TLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGS 108
Query: 431 QDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL 490
+ + DD +RI D + R L GH V + F+P +LL+S S D T+R+W+L
Sbjct: 109 KYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQ 168
Query: 491 LWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYS-DVDC 549
CL + H P+ + S G A+A +D MAR+W S L+ V + +
Sbjct: 169 DGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPLSN 228
Query: 550 VQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSF 594
+QF N Y+ + + IRLWD VR+ H Y++S+
Sbjct: 229 LQFTENRKYLLVSNLNSQIRLWDYRRNRVVRIFDSHVNTRYSMSW 273
Score = 40 (19.1 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 7/34 (20%), Positives = 17/34 (50%)
Query: 172 YPVLVHMYIELVYNGHEHQATEMLHKHLMDHEPH 205
+P+ + ++ G + E +HK + ++E H
Sbjct: 8 FPLNHDLQVQKDQKGVVEEDEEQIHKRIRNYESH 41
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 305 (112.4 bits), Expect = 2.4e-26, P = 2.4e-26
Identities = 66/234 (28%), Positives = 117/234 (50%)
Query: 426 SSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIR 485
SSD + I DD +++ D +TL+GH ++F+P ++++S S D T+R
Sbjct: 80 SSDA-RFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVR 138
Query: 486 LWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYS 545
+W + +CL V H PV + F+ G S+ +D + R+W + + H ++ + +
Sbjct: 139 IWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDEN 198
Query: 546 D-VDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALS--FSVC-GRFL 601
V V+F PN ++ G+ D T+RLW+ + ++ TGH Y +S FSV G+ +
Sbjct: 199 PPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRI 258
Query: 602 ASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
S D VHMW+L++ + V + N++AS D +V++W
Sbjct: 259 VSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 276 (102.2 bits), Expect = 3.4e-23, P = 3.4e-23
Identities = 61/212 (28%), Positives = 103/212 (48%)
Query: 453 TRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV-----YKGHGHPVWD 507
++TL H V + FS D LL S S D TIR +++ + + GH + + D
Sbjct: 17 SQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISD 76
Query: 508 IKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRT 567
+ FS + SA D+ +LW ++ ++ +GH + CV F+P SN + +GS D T
Sbjct: 77 VAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDET 136
Query: 568 IRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXX 627
+R+WD TG +++L H PV A+ F+ G + S+ DG +WD
Sbjct: 137 VRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDD 196
Query: 628 XDV-VRALCFSRDGNILASSGQDCSVKLWDFA 658
+ V + FS +G + D +++LW+ +
Sbjct: 197 ENPPVSFVRFSPNGKFILVGTLDNTLRLWNIS 228
Score = 233 (87.1 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 66/263 (25%), Positives = 118/263 (44%)
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGH 501
+ +++ AE + GHE + ++FS D ++S S D T++LW + + GH
Sbjct: 53 INTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGH 112
Query: 502 GHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVAT 561
+ + + F+P S D R+W + L++ H V V F+ + + + +
Sbjct: 113 TNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVS 172
Query: 562 GSSDRTIRLWDCVTGSHVR-LLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXX 620
S D R+WD TG V+ L+ PV + FS G+F+ D + +W++S+
Sbjct: 173 SSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKF 232
Query: 621 XXXXXXXXDVVRAL--CFS-RDGNILASSGQDCSVKLWDF--AKLSDEV-G-TEEV-NLS 672
+ + FS +G + S +D V +W+ KL ++ G TE V N++
Sbjct: 233 LKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVA 292
Query: 673 -HSAD--IKNSSLAYLVRSYKTK 692
H + I + SL VR + K
Sbjct: 293 CHPTENLIASGSLDKTVRIWTQK 315
Score = 214 (80.4 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 58/205 (28%), Positives = 94/205 (45%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK-LKAMKS-SDQLQDIEMECD- 438
TL+ C + +++ G + +++W + K LK + + SD + ++ D
Sbjct: 108 TLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDG 167
Query: 439 --------DILVRIMDERNAETTRTLVGHEGP-VRKLSFSPDRSLLLSCSQDNTIRLWSL 489
D L RI D +TL+ E P V + FSP+ +L + DNT+RLW++
Sbjct: 168 SLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNI 227
Query: 490 LLWRCLVVYKGHGHPVWDIK--FS-PHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSD 546
+ L Y GH + + I FS +G S D +W +S L+ GH
Sbjct: 228 SSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTET 287
Query: 547 VDCVQFHPNSNYVATGSSDRTIRLW 571
V V HP N +A+GS D+T+R+W
Sbjct: 288 VMNVACHPTENLIASGSLDKTVRIW 312
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 304 (112.1 bits), Expect = 3.1e-26, P = 3.1e-26
Identities = 72/236 (30%), Positives = 116/236 (49%)
Query: 426 SSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIR 485
SSD + + DD +++ D R+ + +TL GH V F+P +L++S S D +++
Sbjct: 90 SSDSSRLVSAS-DDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVK 148
Query: 486 LWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYS 545
+W + +CL H P+ + F+ +G S +D + R+W S LR +
Sbjct: 149 IWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGN 208
Query: 546 D-VDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYAL--SFSVCGR-FL 601
V V+F PN Y+ T + D T++LWD G ++ TGHK Y L SFSV GR ++
Sbjct: 209 PPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWV 268
Query: 602 ASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSG--QDCSVKLW 655
S D V++W+L DVV + NI+AS+ D ++K+W
Sbjct: 269 VSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVW 324
Score = 272 (100.8 bits), Expect = 9.1e-23, P = 9.1e-23
Identities = 57/206 (27%), Positives = 99/206 (48%)
Query: 455 TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG 514
TL GH + + FSP+ L S + D I +W C GH + D+ +S
Sbjct: 34 TLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDS 93
Query: 515 YYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCV 574
SA D+ ++W S L+ GH V C F+P SN + +GS D ++++W+
Sbjct: 94 SRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVK 153
Query: 575 TGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDV-VRA 633
TG ++ L+ H P+ A++F+ G + S DG +WD ++ + V
Sbjct: 154 TGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSF 213
Query: 634 LCFSRDGNILASSGQDCSVKLWDFAK 659
+ FS +G + ++ D ++KLWD+++
Sbjct: 214 VKFSPNGKYILTATLDNTLKLWDYSR 239
Score = 248 (92.4 bits), Expect = 3.6e-20, P = 3.6e-20
Identities = 62/240 (25%), Positives = 105/240 (43%)
Query: 421 LKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQ 480
+ ++K S + + D L+ I + +TL GH + +++S D S L+S S
Sbjct: 42 ISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRLVSASD 101
Query: 481 DNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLF 540
D T+++W + +CL KGH V+ F+P S D ++W + L+
Sbjct: 102 DKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTL 161
Query: 541 VGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH-KAPVYALSFSVCGR 599
H + V F+ N + + +GS D R+WD +G +R L PV + FS G+
Sbjct: 162 SAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGK 221
Query: 600 FLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRAL--CFSRDGNILASSG-QDCSVKLWD 656
++ +A D + +WD S + L FS G SG +D V +W+
Sbjct: 222 YILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWN 281
Score = 210 (79.0 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 66/249 (26%), Positives = 112/249 (44%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK-LKAMKS-SDQLQ--DIEMEC 437
TL +++ S D S L + +K+W + K LK +K SD + D
Sbjct: 76 TLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPS 135
Query: 438 DDIL-------VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL 490
+ I+ V+I + + + +TL H P+ ++F+ + SL++S S D R+W
Sbjct: 136 NLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAA 195
Query: 491 LWRCLVVYKGHGHP-VWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC 549
+CL G+P V +KFSP+G Y +A D +LW L+ + GH ++ C
Sbjct: 196 SGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYC 255
Query: 550 V--QFHPNSN-YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAG- 605
+ F +V +GS D + +W+ T V+ L GH V + + +ASA
Sbjct: 256 LFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAAL 315
Query: 606 -GDGNVHMW 613
D + +W
Sbjct: 316 ENDKTIKVW 324
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 303 (111.7 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 72/250 (28%), Positives = 118/250 (47%)
Query: 376 PSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLW--SLVPQKLKAMKSSDQLQDI 433
P Y + VTC S +LA G + +++W ++ + + ++ +
Sbjct: 50 PQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV 109
Query: 434 EMECDD--ILVRIMDERNAETTRT--------LVGHEGPVRKLSFSPDRSLLLSCSQDNT 483
C D +LV D++ + T L H VR FSPD L++S S D T
Sbjct: 110 HF-CSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKT 168
Query: 484 IRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGH 543
++LW C+ Y HG V + F P G A+AG D ++W T ++ ++ + H
Sbjct: 169 VKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLH 228
Query: 544 YSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLAS 603
+ V+ + FHP+ NY+ T SSD T+++ D + G + L GH+ P ++FS G + AS
Sbjct: 229 SAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFAS 288
Query: 604 AGGDGNVHMW 613
G D V +W
Sbjct: 289 GGSDEQVMVW 298
Score = 285 (105.4 bits), Expect = 3.6e-24, P = 3.6e-24
Identities = 83/282 (29%), Positives = 119/282 (42%)
Query: 387 RQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSS---DQLQDIEMECD----- 438
R VTC + S + LA G +S + +W + PQ +A + + D + +
Sbjct: 19 RDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQS-RAYRFTGHKDAVTCVNFSPSGHLLA 77
Query: 439 ----DILVRI-MDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWR 493
D VRI + E+T H VR + F D LL++ S D T+++WS R
Sbjct: 78 SGSRDKTVRIWVPNVKGEST-VFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQR 136
Query: 494 CLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFH 553
L H + V KFSP G SA D+ +LW S + + H V V FH
Sbjct: 137 FLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFH 196
Query: 554 PNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMW 613
P+ +A D T+++WD T V+ H A V ALSF G +L +A D + +
Sbjct: 197 PSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKIL 256
Query: 614 DLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
DL + FSR G AS G D V +W
Sbjct: 257 DLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 248 (92.4 bits), Expect = 3.6e-20, P = 3.6e-20
Identities = 57/199 (28%), Positives = 90/199 (45%)
Query: 458 GHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYF 517
GH+ V ++FSP LL S S+D T+R+W + V++ H V + F G
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLL 118
Query: 518 ASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGS 577
+A D+ ++W+T L H + V C +F P+ + + S D+T++LWD +
Sbjct: 119 VTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRE 178
Query: 578 HVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFS 637
V H V + F G +A+AG D V +WD V AL F
Sbjct: 179 CVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFH 238
Query: 638 RDGNILASSGQDCSVKLWD 656
GN L ++ D ++K+ D
Sbjct: 239 PSGNYLITASSDSTLKILD 257
Score = 237 (88.5 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 58/203 (28%), Positives = 89/203 (43%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
R GH V + FS + L S S D+T+ +W + + GH V + FSP
Sbjct: 13 RHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPS 72
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
G+ AS D+ R+W + +F H + V V F + + T S D+T+++W
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWST 132
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRA 633
+ LT H V FS GR + SA D V +WD ++ V
Sbjct: 133 HRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTY 192
Query: 634 LCFSRDGNILASSGQDCSVKLWD 656
+ F G +A++G D +VK+WD
Sbjct: 193 VDFHPSGTCIAAAGMDNTVKVWD 215
Score = 141 (54.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 39/154 (25%), Positives = 65/154 (42%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQKL--KAMKSSDQLQDIEME----CD----- 438
V CA+ S D ++ + +KLW ++ + + ++ C
Sbjct: 148 VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGM 207
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D V++ D R + H V LSF P + L++ S D+T+++ L+ R L
Sbjct: 208 DNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTL 267
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATD 532
GH P + FS G YFAS G D +W ++
Sbjct: 268 HGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 301
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 303 (111.7 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 81/292 (27%), Positives = 137/292 (46%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQL--QDIEMECD 438
+TL + V+ + S + LA ++ IK+W K + S +L D+ D
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 98
Query: 439 -DILV--------RIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL 489
++LV +I D + + +TL GH V +F+P +L++S S D ++R+W +
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 490 LLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSD-VD 548
+CL H PV + F+ G S+ +D + R+W T S L+ + + V
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 218
Query: 549 CVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYAL--SFSVCG-RFLASAG 605
V+F PN Y+ + D T++LWD G ++ T HK Y + +FSV G +++ S
Sbjct: 219 FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGS 278
Query: 606 GDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSG--QDCSVKLW 655
D V++W+L DVV + NI+AS+ D ++KLW
Sbjct: 279 EDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 282 (104.3 bits), Expect = 7.6e-24, P = 7.6e-24
Identities = 62/206 (30%), Positives = 100/206 (48%)
Query: 455 TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG 514
TL GH V + FSP+ L S S D I++W + GH + D+ +S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 515 YYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCV 574
SA D+ ++W S L+ GH + V C F+P SN + +GS D ++R+WD
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 575 TGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDV-VRA 633
TG ++ L H PV A+ F+ G + S+ DG +WD ++ + V
Sbjct: 160 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 219
Query: 634 LCFSRDGNILASSGQDCSVKLWDFAK 659
+ FS +G + ++ D ++KLWD++K
Sbjct: 220 VKFSPNGKYILAATLDNTLKLWDYSK 245
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 302 (111.4 bits), Expect = 5.1e-26, P = 5.1e-26
Identities = 72/249 (28%), Positives = 114/249 (45%)
Query: 376 PSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLW-------SLV----PQKLKAM 424
P Y + VTC S +LA G + +++W S V ++++
Sbjct: 50 PQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV 109
Query: 425 KSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTI 484
Q + DD V++ +L H VR FSPD L++S S D T+
Sbjct: 110 HFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTV 169
Query: 485 RLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHY 544
+LW C+ Y HG V + F P G A+AG D ++W ++ L+ + H
Sbjct: 170 KLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHS 229
Query: 545 SDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASA 604
+ V+ + FHP+ NY+ T SSD T+++ D + G + L GH+ P ++FS G + AS
Sbjct: 230 AAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASG 289
Query: 605 GGDGNVHMW 613
G D V +W
Sbjct: 290 GSDEQVMVW 298
Score = 278 (102.9 bits), Expect = 5.7e-22, P = 5.7e-22
Identities = 81/282 (28%), Positives = 118/282 (41%)
Query: 387 RQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSS---DQLQDIEMECD----- 438
R VTC + S + LA G +S + +W + PQ +A + + D + +
Sbjct: 19 RDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQS-RAYRFTGHKDAVTCVNFSPSGHLLA 77
Query: 439 ----DILVRI-MDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWR 493
D VRI + E+T H VR + F D L++ S D T+++WS R
Sbjct: 78 SGSRDKTVRIWVPNVKGEST-VFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQR 136
Query: 494 CLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFH 553
L H + V KFSP G SA D+ +LW S + + H V V FH
Sbjct: 137 FLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFH 196
Query: 554 PNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMW 613
P+ +A D T+++WD T ++ H A V ALSF G +L +A D + +
Sbjct: 197 PSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKIL 256
Query: 614 DLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
DL + FSR G AS G D V +W
Sbjct: 257 DLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 246 (91.7 bits), Expect = 4.2e-18, P = 4.2e-18
Identities = 56/199 (28%), Positives = 90/199 (45%)
Query: 458 GHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYF 517
GH+ V ++FSP LL S S+D T+R+W + V++ H V + F G
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSL 118
Query: 518 ASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGS 577
+A D+ ++W+T L H + V C +F P+ + + S D+T++LWD +
Sbjct: 119 VTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRE 178
Query: 578 HVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFS 637
+ H V + F G +A+AG D V +WD V AL F
Sbjct: 179 CIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFH 238
Query: 638 RDGNILASSGQDCSVKLWD 656
GN L ++ D ++K+ D
Sbjct: 239 PSGNYLITASSDSTLKILD 257
Score = 236 (88.1 bits), Expect = 6.0e-17, P = 6.0e-17
Identities = 58/203 (28%), Positives = 89/203 (43%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
R GH V + FS + L S S D+T+ +W + + GH V + FSP
Sbjct: 13 RHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPS 72
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
G+ AS D+ R+W + +F H + V V F + + T S D+T+++W
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWST 132
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRA 633
+ LT H V FS GR + SA D V +WD ++ V
Sbjct: 133 HRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTY 192
Query: 634 LCFSRDGNILASSGQDCSVKLWD 656
+ F G +A++G D +VK+WD
Sbjct: 193 VDFHPSGTCIAAAGMDNTVKVWD 215
Score = 140 (54.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 39/154 (25%), Positives = 65/154 (42%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQKL--KAMKSSDQLQDIEME----CD----- 438
V CA+ S D ++ + +KLW ++ + + ++ C
Sbjct: 148 VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGM 207
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D V++ D R + H V LSF P + L++ S D+T+++ L+ R L
Sbjct: 208 DNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTL 267
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATD 532
GH P + FS G YFAS G D +W ++
Sbjct: 268 HGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 301
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 311 (114.5 bits), Expect = 6.5e-26, P = 6.5e-26
Identities = 83/276 (30%), Positives = 127/276 (46%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLK-AMKS-SDQLQDIEMECDD 439
TL V S + +LA G S++ IKLW+ LK M+ SD+++ + +
Sbjct: 78 TLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNG 137
Query: 440 ILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYK 499
++ + T+ GH V ++FSPD LL S S + TI+LW
Sbjct: 138 ---QLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLG 194
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + V + FSP G AS +D +LW S GH + ++ + F PN +
Sbjct: 195 GHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLL 254
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXX 619
A+GSSD TI+LWD TGS L GH V ++ FS + L S GD + +WD +
Sbjct: 255 ASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPATGI 314
Query: 620 XXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
+VR++ FS + L ++ S++ W
Sbjct: 315 LKHSMRTPG-IVRSIEFSIELPQLITNLGTFSIQAW 349
Score = 292 (107.8 bits), Expect = 2.4e-23, P = 2.4e-23
Identities = 72/222 (32%), Positives = 109/222 (49%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
+D +++ D + +TL GH V+ ++FSP+ LL S S D TI+LW+
Sbjct: 61 NDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHT 120
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSD-VDCVQFHPNS 556
+GH V + FSP+G +LW + L+ + +SD V V F P+
Sbjct: 121 MEGHSDRVESVAFSPNG------------QLW-NPAIGSLKHTIEGHSDWVLSVAFSPDG 167
Query: 557 NYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLS 616
+A+GS+++TI+LWD T L GH V L FS GR LAS D + +WD
Sbjct: 168 QLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPP 227
Query: 617 NXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFA 658
+ + + +L FS +G +LAS D ++KLWD A
Sbjct: 228 SGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTA 269
Score = 283 (104.7 bits), Expect = 3.0e-22, P = 3.0e-22
Identities = 83/313 (26%), Positives = 137/313 (43%)
Query: 355 IDKLKALREATKRVTLGPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLW 414
+D + L+ +R + P + TL + S D +LA G +++ IKLW
Sbjct: 11 VDCINTLQSTLQRPKVEDNWGPELQ--TLEGHSDWIETVTFSPDGRLLASGSNDTTIKLW 68
Query: 415 SL----VPQKLKAMKSSDQL-------QDIEMECDDILVRIMDERNAETTRTLVGHEGPV 463
+ Q L+ SS Q Q + D +++ + + T+ GH V
Sbjct: 69 DPASGGLKQTLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRV 128
Query: 464 RKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHD 523
++FSP+ +LW+ + +GH V + FSP G AS +
Sbjct: 129 ESVAFSPNG------------QLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAE 176
Query: 524 RMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLT 583
+ +LW + + GH + V + F P+ +A+GS+D TI+LWD +GS L
Sbjct: 177 KTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLE 236
Query: 584 GHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNIL 643
GH + +L+FS G+ LAS D + +WD + D+V ++ FS D +L
Sbjct: 237 GHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLL 296
Query: 644 ASSGQDCSVKLWD 656
S D ++KLWD
Sbjct: 297 ESGSGDNTIKLWD 309
Score = 131 (51.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 40/142 (28%), Positives = 66/142 (46%)
Query: 576 GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALC 635
G ++ L GH + ++FS GR LAS D + +WD ++ V+++
Sbjct: 31 GPELQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVA 90
Query: 636 FSRDGNILASSGQDCSVKLWDFAK--L-------SDEVGTEEVNLSHSADIKNSSLAYLV 686
FS +G +LAS D ++KLW+ A L SD V E V S + + N ++ L
Sbjct: 91 FSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRV--ESVAFSPNGQLWNPAIGSLK 148
Query: 687 RSYKTKASPLLHLIFSRRNILL 708
+ + + +L + FS LL
Sbjct: 149 HTIEGHSDWVLSVAFSPDGQLL 170
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 300 (110.7 bits), Expect = 8.5e-26, P = 8.5e-26
Identities = 72/249 (28%), Positives = 114/249 (45%)
Query: 376 PSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLW-------SLV----PQKLKAM 424
P Y + VTC S +LA G + +++W S V ++++
Sbjct: 50 PQTRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV 109
Query: 425 KSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTI 484
Q DD V++ + +L H VR FSPD L++S S D T+
Sbjct: 110 HFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTV 169
Query: 485 RLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHY 544
+LW C+ Y HG V + F P G A+AG D ++W ++ L+ + H
Sbjct: 170 KLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHS 229
Query: 545 SDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASA 604
+ V+ + FHP+ NY+ T SSD T+++ D + G + L GH+ P ++FS G + AS
Sbjct: 230 AAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASG 289
Query: 605 GGDGNVHMW 613
G D V +W
Sbjct: 290 GSDEQVMVW 298
Score = 253 (94.1 bits), Expect = 6.6e-19, P = 6.6e-19
Identities = 58/199 (29%), Positives = 92/199 (46%)
Query: 458 GHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYF 517
GH+ V ++FSP LL S S+D T+R+W + V++ H V + F G F
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSF 118
Query: 518 ASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGS 577
+A D+ ++W+T L H + V C +F P+ + + S D+T++LWD +
Sbjct: 119 VTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRE 178
Query: 578 HVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFS 637
V H V + F G +A+AG D V +WD+ V AL F
Sbjct: 179 CVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFH 238
Query: 638 RDGNILASSGQDCSVKLWD 656
GN L ++ D ++K+ D
Sbjct: 239 PSGNYLVTASSDSTLKILD 257
Score = 228 (85.3 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 56/203 (27%), Positives = 87/203 (42%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
R GH V + FS + L S S D+ + +W + + GH V + FSP
Sbjct: 13 RHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPS 72
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
G+ AS D+ R+W + +F H + V V F + T S D+T+++W
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWST 132
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRA 633
+ L+ H V FS GR + SA D V +WD ++ V
Sbjct: 133 HRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTY 192
Query: 634 LCFSRDGNILASSGQDCSVKLWD 656
+ F G +A++G D +VK+WD
Sbjct: 193 VDFHPSGTCIAAAGMDNTVKVWD 215
Score = 138 (53.6 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 39/154 (25%), Positives = 65/154 (42%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQKL--KAMKSSDQLQDIEME----CD----- 438
V CA+ S D ++ + +KLW ++ + + ++ C
Sbjct: 148 VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGM 207
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D V++ D R + H V LSF P + L++ S D+T+++ L+ R L
Sbjct: 208 DNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTL 267
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATD 532
GH P + FS G YFAS G D +W ++
Sbjct: 268 HGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 301
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 297 (109.6 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 71/249 (28%), Positives = 114/249 (45%)
Query: 376 PSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLW-------SLV----PQKLKAM 424
P Y + VTC S +LA G + +++W S V ++++
Sbjct: 81 PQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSV 140
Query: 425 KSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTI 484
Q DD +++ + +L H VR FSPD L++S S D T+
Sbjct: 141 HFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTV 200
Query: 485 RLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHY 544
+LW C+ Y HG V + F P G A+AG D ++W ++ L+ + H
Sbjct: 201 KLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHS 260
Query: 545 SDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASA 604
+ V+ + FHP+ NY+ T SSD T+++ D + G + L GH+ P ++FS G + AS
Sbjct: 261 AAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASG 320
Query: 605 GGDGNVHMW 613
G D V +W
Sbjct: 321 GSDEQVMVW 329
Score = 252 (93.8 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 58/199 (29%), Positives = 92/199 (46%)
Query: 458 GHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYF 517
GH+ V ++FSP LL S S+D T+R+W + V++ H V + F G F
Sbjct: 90 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSF 149
Query: 518 ASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGS 577
+A D+ ++W+T L H + V C +F P+ + + S D+T++LWD +
Sbjct: 150 VTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRE 209
Query: 578 HVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFS 637
V H V + F G +A+AG D V +WD+ V AL F
Sbjct: 210 CVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFH 269
Query: 638 RDGNILASSGQDCSVKLWD 656
GN L ++ D ++K+ D
Sbjct: 270 PSGNYLVTASSDSTLKILD 288
Score = 227 (85.0 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 58/216 (26%), Positives = 91/216 (42%)
Query: 441 LVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKG 500
L + + + R GH V + FS + L S S D+ + +W + + G
Sbjct: 31 LTMALPQEDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTG 90
Query: 501 HGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVA 560
H V + FSP G+ AS D+ R+W + +F H + V V F +
Sbjct: 91 HKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFV 150
Query: 561 TGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXX 620
T S D+TI++W + L+ H V FS GR + SA D V +WD ++
Sbjct: 151 TASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSREC 210
Query: 621 XXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
V + F G +A++G D +VK+WD
Sbjct: 211 VHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWD 246
Score = 138 (53.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 39/154 (25%), Positives = 65/154 (42%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQKL--KAMKSSDQLQDIEME----CD----- 438
V CA+ S D ++ + +KLW ++ + + ++ C
Sbjct: 179 VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGM 238
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D V++ D R + H V LSF P + L++ S D+T+++ L+ R L
Sbjct: 239 DNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTL 298
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATD 532
GH P + FS G YFAS G D +W ++
Sbjct: 299 HGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 332
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 326 (119.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 86/280 (30%), Positives = 127/280 (45%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLW----SLVPQKLKA----MKS---SDQLQDIEMECD 438
V S D +LA + +K+W S + L+ +KS S + + D
Sbjct: 266 VGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLLASASD 325
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D V+I D R L GH VR + FS D L+ S S D T+R+W +
Sbjct: 326 DGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTF 385
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
+ H V + F+ ASA ++W T + + GH V+ V F P+S
Sbjct: 386 EDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRL 445
Query: 559 VATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNX 618
+A+ S DRT+++W TGS R L GH V ++ FS R +ASA D V +WD +
Sbjct: 446 LASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATV 505
Query: 619 XXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFA 658
+ VR++ FS D +LAS+ D +VK+WD A
Sbjct: 506 PLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTA 545
Score = 317 (116.6 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 84/273 (30%), Positives = 125/273 (45%)
Query: 396 SEDVSILAVGFSESYIKLWSLVPQKLK-----------AMKSSDQLQDIEMECDDILVRI 444
S D ++A G ++ +++W L+ A+ + + + D V+I
Sbjct: 356 SHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKI 415
Query: 445 MDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHP 504
D R L GH+ V +SFSPD LL S S D T+++W +GH
Sbjct: 416 WDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDW 475
Query: 505 VWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFV-GHYSDVDCVQFHPNSNYVATGS 563
V + FS ASA D ++W T + PL+ + H + V V F +S +A+ S
Sbjct: 476 VRSVVFSHDSRLIASASDDMTVKIWDTATV-PLQNNLESHDNWVRSVVFSHDSRLLASAS 534
Query: 564 SDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXX 623
D T+++WD TGS L GH V ++SFS R LASA DG V +W +
Sbjct: 535 DDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHT 594
Query: 624 XXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
V +L FS N+LAS+ D +VK+WD
Sbjct: 595 FDGSGRVAISLAFSHTSNLLASAMDDGTVKIWD 627
Score = 302 (111.4 bits), Expect = 7.6e-23, P = 7.6e-23
Identities = 70/201 (34%), Positives = 98/201 (48%)
Query: 458 GHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYF 517
GH+ V +SFS D LL S S D T+++W +GH V + FS
Sbjct: 261 GHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLL 320
Query: 518 ASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGS 577
ASA D ++W T + R+ GH V V F +S +A+GS+DRT+R+W+ TG
Sbjct: 321 ASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGL 380
Query: 578 HVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFS 637
H+ V A+SF+ R LASA GNV +WD D V ++ FS
Sbjct: 381 LRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFS 440
Query: 638 RDGNILASSGQDCSVKLWDFA 658
D +LAS+ D +VK+W A
Sbjct: 441 PDSRLLASASDDRTVKIWHAA 461
Score = 288 (106.4 bits), Expect = 2.5e-21, P = 2.5e-21
Identities = 85/287 (29%), Positives = 123/287 (42%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKS--SDQLQDIEMECDD 439
TL + V S D +LA + +K+W L+ M +D ++ + D
Sbjct: 300 TLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDS 359
Query: 440 ILVRI-MDERNA---ETT-----RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL 490
L+ ++R ETT T HE V +SF+ D L S S +++W
Sbjct: 360 RLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTR 419
Query: 491 LWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLW--ATDSYHPLRLFVGHYSDVD 548
V +GH V + FSP ASA DR ++W AT S R GH V
Sbjct: 420 TGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQ--RTLEGHNDWVR 477
Query: 549 CVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDG 608
V F +S +A+ S D T+++WD T L H V ++ FS R LASA D
Sbjct: 478 SVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDM 537
Query: 609 NVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
V +WD + D V ++ FS D +LAS+ D +VK+W
Sbjct: 538 TVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIW 584
Score = 235 (87.8 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 57/178 (32%), Positives = 81/178 (45%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
DD V+I RTL GH VR + FS D L+ S S D T+++W
Sbjct: 451 DDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNN 510
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
+ H + V + FS ASA D ++W T + GH V+ V F P+S
Sbjct: 511 LESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSR 570
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
+A+ S D T+++W TG+ G +L+FS LASA DG V +WD+
Sbjct: 571 LLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDM 628
Score = 229 (85.7 bits), Expect = 6.2e-15, P = 6.2e-15
Identities = 51/159 (32%), Positives = 75/159 (47%)
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
+KGH V + FS ASA D ++W T + GH V V F +S
Sbjct: 259 FKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSR 318
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
+A+ S D T+++WD TG+ R+L GH V ++ FS R +AS D V +W+ +
Sbjct: 319 LLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTT 378
Query: 618 XXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
D V A+ F+ D LAS+ +VK+WD
Sbjct: 379 GLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWD 417
Score = 154 (59.3 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 48/192 (25%), Positives = 80/192 (41%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLW--SLVPQK---------LKAMKSSDQL 430
TL V S D ++A + +K+W + VP + ++++ S
Sbjct: 468 TLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDS 527
Query: 431 QDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL 490
+ + DD+ V+I D TL GH+ V +SFSPD LL S S D T+++W
Sbjct: 528 RLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAA 587
Query: 491 LWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLF-VGHYSDVDC 549
+ G G + FS ASA D ++W + Y F + H ++
Sbjct: 588 TGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDMEIYSLRHTFDLDH--EIQR 645
Query: 550 VQFHPNSNYVAT 561
+QF + + + T
Sbjct: 646 IQFDKSMSSLIT 657
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 292 (107.8 bits), Expect = 6.3e-25, P = 6.3e-25
Identities = 72/249 (28%), Positives = 114/249 (45%)
Query: 376 PSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLW-------SLV----PQKLKAM 424
P Y + VTC S +LA G + +++W S V ++++
Sbjct: 12 PQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV 71
Query: 425 KSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTI 484
Q DD V++ + +L H VR FSPD L++S S D T+
Sbjct: 72 HFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTV 131
Query: 485 RLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHY 544
+LW C+ Y HG V + F P G A+AG D ++W ++ L+ + H
Sbjct: 132 KLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHS 191
Query: 545 SDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASA 604
+ V+ + FHP+ NY+ T SSD T+++ D + G + L GH+ P ++FS G + AS
Sbjct: 192 AAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASG 251
Query: 605 GGDGNVHMW 613
G D V +W
Sbjct: 252 GSDEQVMVW 260
Score = 249 (92.7 bits), Expect = 8.6e-19, P = 8.6e-19
Identities = 58/199 (29%), Positives = 91/199 (45%)
Query: 458 GHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYF 517
GH+ V ++FSP LL S S+D T+R+W + V++ H V + F G F
Sbjct: 21 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSF 80
Query: 518 ASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGS 577
+A D+ ++WAT L H + V C +F P+ + + S D+T++LWD +
Sbjct: 81 VTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRE 140
Query: 578 HVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFS 637
V H V + F G +A+AG D V +WD+ V L F
Sbjct: 141 CVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFH 200
Query: 638 RDGNILASSGQDCSVKLWD 656
GN L ++ D ++K+ D
Sbjct: 201 PSGNYLITASSDSTLKILD 219
Score = 242 (90.2 bits), Expect = 6.3e-18, P = 6.3e-18
Identities = 63/218 (28%), Positives = 91/218 (41%)
Query: 439 DILVRI-MDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
D VRI + E+T H VR + F D ++ S D T+++W+ + L
Sbjct: 44 DKTVRIWVPNVKGEST-VFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFS 102
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
H + V KFSP G SA D+ +LW S + + H V V FHP+
Sbjct: 103 LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGT 162
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
+A D T+++WD T ++ H A V LSF G +L +A D + + DL
Sbjct: 163 CIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLME 222
Query: 618 XXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
+ FSR G AS G D V +W
Sbjct: 223 GRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 260
Score = 199 (75.1 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 48/176 (27%), Positives = 76/176 (43%)
Query: 481 DNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLF 540
D+ + +W + + GH V + FSP G+ AS D+ R+W + +F
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVF 61
Query: 541 VGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRF 600
H + V V F + T S D+T+++W + L+ H V FS GR
Sbjct: 62 RAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRL 121
Query: 601 LASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ SA D V +WD S+ V + F G +A++G D +VK+WD
Sbjct: 122 IVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD 177
Score = 137 (53.3 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 30/94 (31%), Positives = 45/94 (47%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D V++ D R + H V LSF P + L++ S D+T+++ L+ R L
Sbjct: 170 DNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTL 229
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATD 532
GH P + FS G YFAS G D +W ++
Sbjct: 230 HGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 263
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 309 (113.8 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 71/200 (35%), Positives = 98/200 (49%)
Query: 458 GHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL-LLWRCLVVYKGHGHPVWDIKFSPHGYY 516
G + P+ SFS D +L +CS +LW + + + V K H D+ FSP
Sbjct: 253 GDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDC 312
Query: 517 FASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTG 576
A+A DR A+LW TD L+ F GH + V FHP+ Y+ T S D+T RLWD TG
Sbjct: 313 LATASADRTAKLWKTDGTL-LQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTG 371
Query: 577 SHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCF 636
+ + L GH VY ++F G AS G D +WDL V ++ F
Sbjct: 372 AELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNF 431
Query: 637 SRDGNILASSGQDCSVKLWD 656
S +G LAS G+D ++WD
Sbjct: 432 SPNGYHLASGGEDNQCRIWD 451
Score = 250 (93.1 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 51/160 (31%), Positives = 81/160 (50%)
Query: 458 GHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYF 517
GH V ++F D +L SC D+ R+W L R ++V++GH PV+ + FSP+GY+
Sbjct: 379 GHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHL 438
Query: 518 ASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY-VATGSSDRTIRLWDCVTG 576
AS G D R+W L + H + V V++ P Y +AT S D + +W
Sbjct: 439 ASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDF 498
Query: 577 SHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLS 616
S V+ L GH++ V +L + +A+ D + +W S
Sbjct: 499 SLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTSS 538
Score = 240 (89.5 bits), Expect = 5.9e-17, P = 5.9e-17
Identities = 65/231 (28%), Positives = 102/231 (44%)
Query: 452 TTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFS 511
T L H+ + FSP L + S D T +LW L ++GH + + F
Sbjct: 290 TIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTD-GTLLQTFEGHLDRLARVAFH 348
Query: 512 PHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLW 571
P G Y + +D+ RLW ++ L L GH V + F + A+ D R+W
Sbjct: 349 PSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVW 408
Query: 572 DCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVV 631
D TG + + GH PV++++FS G LAS G D +WDL ++V
Sbjct: 409 DLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLV 468
Query: 632 RALCFS-RDGNILASSGQDCSVKLW---DFAKLSDEVGTEE--VNLSHSAD 676
+ + ++G LA++ D V +W DF+ + G E +L +AD
Sbjct: 469 SQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITAD 519
Score = 213 (80.0 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 44/134 (32%), Positives = 70/134 (52%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D L R+ D R + GH PV ++FSP+ L S +DN R+W L + + L +
Sbjct: 402 DSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYII 461
Query: 499 KGHGHPVWDIKFSPH-GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
H + V +K+ P GY+ A+A +D +W+ + ++ GH S V + +S+
Sbjct: 462 PAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSS 521
Query: 558 YVATGSSDRTIRLW 571
+AT S DRTI+LW
Sbjct: 522 CIATVSHDRTIKLW 535
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 287 (106.1 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 70/249 (28%), Positives = 116/249 (46%)
Query: 376 PSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLW-------SLV----PQKLKAM 424
P + Y L+ + V C + S ++A G + + LW S V ++++
Sbjct: 51 PQMRAYCLVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSV 110
Query: 425 KSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTI 484
S Q + DD +++ + +L H VR FSPD L+ S S D T+
Sbjct: 111 HFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTV 170
Query: 485 RLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHY 544
+LW C+ + HG ++F P G A+AG D+ ++W L+ + H
Sbjct: 171 KLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHT 230
Query: 545 SDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASA 604
+ V+ + FHP+ NY+ T S+D T+++ D + G + L GH+ P ++FS G F AS
Sbjct: 231 AAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASG 290
Query: 605 GGDGNVHMW 613
G D V +W
Sbjct: 291 GSDEQVMVW 299
Score = 277 (102.6 bits), Expect = 2.6e-23, P = 2.6e-23
Identities = 78/282 (27%), Positives = 125/282 (44%)
Query: 387 RQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKA---MKSSDQLQDIEMECDDILVR 443
R +T + S + LA G +S +K+WS+ PQ ++A + D + ++ LV
Sbjct: 20 RDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQ-MRAYCLVGHKDAVMCVQFSPSGHLVA 78
Query: 444 I--MDER--------NAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWR 493
D+ E+T H VR + FS D L++ S D TI++W++ +
Sbjct: 79 SGSRDKTVCLWVPSVKGEST-VFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQK 137
Query: 494 CLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFH 553
L H + V +FSP G ASA D+ +LW S + F H + V+FH
Sbjct: 138 FLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFH 197
Query: 554 PNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMW 613
P+ +A +D+T+++WD ++ H A V +LSF G +L +A D + +
Sbjct: 198 PSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKIL 257
Query: 614 DLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
DL + FSR G+ AS G D V +W
Sbjct: 258 DLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVW 299
Score = 241 (89.9 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 72/271 (26%), Positives = 118/271 (43%)
Query: 447 ERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL---LLWRCLVVYKGHGH 503
E + R GH + + FS ++ L S S D+ +++WS+ + CLV GH
Sbjct: 7 EEDPSLERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLV---GHKD 63
Query: 504 PVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGS 563
V ++FSP G+ AS D+ LW +F H + V V F + + T S
Sbjct: 64 AVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTAS 123
Query: 564 SDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXX 623
D+TI++W + L+ H V FS GR +ASA D V +WD ++
Sbjct: 124 DDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHS 183
Query: 624 XXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLA 683
+ F G +A++G D +VK+WD +++ + +V H+A + + S
Sbjct: 184 FCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWD-VRMNRLLQHYQV---HTAAVNSLSFH 239
Query: 684 ----YLVRSYKTKASPLLHLIFSRRNILLRG 710
YL+ + +L L+ R L G
Sbjct: 240 PSGNYLITASNDSTLKILDLLEGRLLYTLHG 270
Score = 146 (56.5 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 42/154 (27%), Positives = 64/154 (41%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQKL--KAMKSSDQLQDIEME----C-----D 438
V CA S D ++A + +KLW ++ + +E C
Sbjct: 149 VRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGT 208
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D V++ D R + H V LSF P + L++ S D+T+++ LL R L
Sbjct: 209 DKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTL 268
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATD 532
GH P + FS G +FAS G D +W T+
Sbjct: 269 HGHQGPATCVAFSRTGDFFASGGSDEQVMVWKTN 302
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 286 (105.7 bits), Expect = 2.8e-24, P = 2.8e-24
Identities = 66/206 (32%), Positives = 102/206 (49%)
Query: 455 TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG 514
TL GH + FSP L + S D T+++W++ C GH V DI +S
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDS 141
Query: 515 YYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCV 574
SA D+ +++ + + GH + V C F+P S+ V +GS D ++R+WD
Sbjct: 142 RCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVK 201
Query: 575 TGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDV-VRA 633
TG ++ L H PV A+SF+ G +AS DG V +WD +N + V
Sbjct: 202 TGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAF 261
Query: 634 LCFSRDGNILASSGQDCSVKLWDFAK 659
+ FS +G + +S D ++KLWDF+K
Sbjct: 262 VKFSPNGKYILASNLDSTLKLWDFSK 287
Score = 266 (98.7 bits), Expect = 6.1e-21, P = 6.1e-21
Identities = 75/295 (25%), Positives = 133/295 (45%)
Query: 378 IACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQL--QDI-- 433
+ C TL + ++ A+ S L ++ +K+W++ + + +L DI
Sbjct: 79 LMC-TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAW 137
Query: 434 --EMEC-----DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRL 486
+ C DD ++I + + T+TL GH V +F+P SL++S S D ++R+
Sbjct: 138 SSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRI 197
Query: 487 WSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSD 546
W + C+ H PV + F+ G AS +D + R+W T + ++ V +
Sbjct: 198 WDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENP 257
Query: 547 -VDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYAL--SFSVCG-RFLA 602
V V+F PN Y+ + D T++LWD G ++ TGH+ Y + +FSV G +++
Sbjct: 258 PVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWII 317
Query: 603 SAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSG--QDCSVKLW 655
S D +++W+L V A NI+AS D + +W
Sbjct: 318 SGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 242 (90.2 bits), Expect = 7.4e-18, P = 7.4e-18
Identities = 55/222 (24%), Positives = 102/222 (45%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D V+I + + RTL GH+ V +++S D ++S S D T++++ ++ R
Sbjct: 108 DKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTL 167
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
KGH + V+ F+P S D R+W + ++ H V V F+ + +
Sbjct: 168 KGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSL 227
Query: 559 VATGSSDRTIRLWDCVTGSHVR-LLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
+A+GS D +R+WD G ++ L+ PV + FS G+++ ++ D + +WD S
Sbjct: 228 IASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSK 287
Query: 618 XXXXXXXXXXXDVVRALC--FS-RDGNILASSGQDCSVKLWD 656
+ + FS G + S +DC + +W+
Sbjct: 288 GKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWN 329
Score = 228 (85.3 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 46/167 (27%), Positives = 82/167 (49%)
Query: 492 WRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQ 551
++ + +GH + KFSP G Y ++ D+ ++W D R GH V+ +
Sbjct: 77 YKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIA 136
Query: 552 FHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVH 611
+ +S V + S D+T+++++ VT + L GH V+ +F+ + S D +V
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVR 196
Query: 612 MWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFA 658
+WD+ D V A+ F+RDG+++AS D V++WD A
Sbjct: 197 IWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTA 243
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 286 (105.7 bits), Expect = 2.8e-24, P = 2.8e-24
Identities = 66/206 (32%), Positives = 102/206 (49%)
Query: 455 TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG 514
TL GH + FSP L + S D T+++W++ C GH V DI +S
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDS 141
Query: 515 YYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCV 574
SA D+ +++ + + GH + V C F+P S+ V +GS D ++R+WD
Sbjct: 142 RCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVK 201
Query: 575 TGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDV-VRA 633
TG ++ L H PV A+SF+ G +AS DG V +WD +N + V
Sbjct: 202 TGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAF 261
Query: 634 LCFSRDGNILASSGQDCSVKLWDFAK 659
+ FS +G + +S D ++KLWDF+K
Sbjct: 262 VKFSPNGKYILASNLDSTLKLWDFSK 287
Score = 266 (98.7 bits), Expect = 6.1e-21, P = 6.1e-21
Identities = 75/295 (25%), Positives = 133/295 (45%)
Query: 378 IACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQL--QDI-- 433
+ C TL + ++ A+ S L ++ +K+W++ + + +L DI
Sbjct: 79 LMC-TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAW 137
Query: 434 --EMEC-----DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRL 486
+ C DD ++I + + T+TL GH V +F+P SL++S S D ++R+
Sbjct: 138 SSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRI 197
Query: 487 WSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSD 546
W + C+ H PV + F+ G AS +D + R+W T + ++ V +
Sbjct: 198 WDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENP 257
Query: 547 -VDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYAL--SFSVCG-RFLA 602
V V+F PN Y+ + D T++LWD G ++ TGH+ Y + +FSV G +++
Sbjct: 258 PVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWII 317
Query: 603 SAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSG--QDCSVKLW 655
S D +++W+L V A NI+AS D + +W
Sbjct: 318 SGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 242 (90.2 bits), Expect = 7.4e-18, P = 7.4e-18
Identities = 55/222 (24%), Positives = 102/222 (45%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D V+I + + RTL GH+ V +++S D ++S S D T++++ ++ R
Sbjct: 108 DKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTL 167
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
KGH + V+ F+P S D R+W + ++ H V V F+ + +
Sbjct: 168 KGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSL 227
Query: 559 VATGSSDRTIRLWDCVTGSHVR-LLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
+A+GS D +R+WD G ++ L+ PV + FS G+++ ++ D + +WD S
Sbjct: 228 IASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSK 287
Query: 618 XXXXXXXXXXXDVVRALC--FS-RDGNILASSGQDCSVKLWD 656
+ + FS G + S +DC + +W+
Sbjct: 288 GKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWN 329
Score = 228 (85.3 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 46/167 (27%), Positives = 82/167 (49%)
Query: 492 WRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQ 551
++ + +GH + KFSP G Y ++ D+ ++W D R GH V+ +
Sbjct: 77 YKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIA 136
Query: 552 FHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVH 611
+ +S V + S D+T+++++ VT + L GH V+ +F+ + S D +V
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVR 196
Query: 612 MWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFA 658
+WD+ D V A+ F+RDG+++AS D V++WD A
Sbjct: 197 IWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTA 243
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 296 (109.3 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 93/329 (28%), Positives = 141/329 (42%)
Query: 387 RQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK-----------LKAMKSSDQLQDIEM 435
R +T + S +A G ++ + +W++ PQ + ++ S +
Sbjct: 18 RDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLLAS 77
Query: 436 ECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCL 495
D VR+ + H G VR + FS D LL+ S D +I+LWS+ + +
Sbjct: 78 SSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKII 137
Query: 496 VVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFV--GHYSDVDCVQFH 553
+ H + V +FSP G S DR +LW S + F G YS V FH
Sbjct: 138 CTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSY--VDFH 195
Query: 554 PNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMW 613
P+S +AT SSD T+R+WD T + ++ H A V ALSF G L +A D + +
Sbjct: 196 PSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKIL 255
Query: 614 DLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW----DFAKLSDEVGTEEV 669
DL + FSR G+ AS+G D V +W D S + +
Sbjct: 256 DLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVWRTNFDSVDYSRVLQQKRD 315
Query: 670 NLSHSADIKNSSLAYLVRS-YKTKASPLL 697
+ + SA ++ RS KT+ SPLL
Sbjct: 316 HRTPSAQASGAAGDPESRSGQKTEVSPLL 344
Score = 252 (93.8 bits), Expect = 9.8e-19, P = 9.8e-19
Identities = 68/251 (27%), Positives = 111/251 (44%)
Query: 376 PSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQ-------------KLK 422
P Y + VTC + S +LA + ++LW VP ++
Sbjct: 49 PQSRAYRFTGHKDAVTCVQFSPSAHLLASSSRDKTVRLW--VPSVKGESVLFRAHTGSVR 106
Query: 423 AMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDN 482
++ S Q + DD +++ + TL H VR FSPD L++S S D
Sbjct: 107 SVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDR 166
Query: 483 TIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVG 542
T++LW + + + G + F P A+A D R+W ++ L+ +
Sbjct: 167 TVKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQV 226
Query: 543 HYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLA 602
H + V+ + FHP+ N++ T SSD T+++ D + G + L GH+ +SFS G A
Sbjct: 227 HSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFA 286
Query: 603 SAGGDGNVHMW 613
SAG D V +W
Sbjct: 287 SAGSDQQVMVW 297
Score = 236 (88.1 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 53/160 (33%), Positives = 76/160 (47%)
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
+KGH + + FSP G AS D +W F GH V CVQF P+++
Sbjct: 14 FKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAH 73
Query: 558 YVATGSSDRTIRLW-DCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLS 616
+A+ S D+T+RLW V G V L H V ++ FS G+ L +A D ++ +W +
Sbjct: 74 LLASSSRDKTVRLWVPSVKGESV-LFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVH 132
Query: 617 NXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ VR FS DG ++ S D +VKLWD
Sbjct: 133 RQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWD 172
Score = 182 (69.1 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 39/118 (33%), Positives = 56/118 (47%)
Query: 538 RLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVC 597
R F GH + + F P+ +A+GS D ++ +W+ S TGHK V + FS
Sbjct: 12 RNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPS 71
Query: 598 GRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
LAS+ D V +W S VR++CFS DG L ++ D S+KLW
Sbjct: 72 AHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLW 129
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 293 (108.2 bits), Expect = 3.9e-24, P = 3.9e-24
Identities = 71/249 (28%), Positives = 114/249 (45%)
Query: 376 PSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLW-------SLV----PQKLKAM 424
P Y + VTC S +LA G + +++W S V ++++
Sbjct: 50 PQSRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSV 109
Query: 425 KSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTI 484
Q + DD V++ + +L H VR FSPD L++S S D T+
Sbjct: 110 HFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTV 169
Query: 485 RLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHY 544
+LW C+ Y HG V + F P G A+A D ++W ++ L+ + H
Sbjct: 170 KLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHS 229
Query: 545 SDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASA 604
+ V+ + FHP+ NY+ T SSD T+++ D + G + L GH+ P ++FS G + AS
Sbjct: 230 AAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASG 289
Query: 605 GGDGNVHMW 613
G D V +W
Sbjct: 290 GSDEQVMVW 298
Score = 240 (89.5 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 56/199 (28%), Positives = 90/199 (45%)
Query: 458 GHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYF 517
GH+ V ++FSP LL S S+D T+R+W + V++ H V + F G
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSL 118
Query: 518 ASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGS 577
+A D+ ++W+T L H + V C +F P+ + + S D+T++LWD +
Sbjct: 119 VTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRE 178
Query: 578 HVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFS 637
V H V + F G +A+A D V +WD+ V AL F
Sbjct: 179 CVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFH 238
Query: 638 RDGNILASSGQDCSVKLWD 656
GN L ++ D ++K+ D
Sbjct: 239 PSGNYLLTASSDSTLKILD 257
Score = 221 (82.9 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 54/203 (26%), Positives = 87/203 (42%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
R GH + + FS + L S S D+ + +W + + GH V + FSP
Sbjct: 13 RHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPS 72
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
G+ AS D+ R+W + +F H + V V F + + T S D+T+++W
Sbjct: 73 GHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWST 132
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRA 633
+ L+ H V FS GR + SA D V +WD ++ V
Sbjct: 133 HRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTY 192
Query: 634 LCFSRDGNILASSGQDCSVKLWD 656
+ F G +A++ D +VK+WD
Sbjct: 193 VDFHPSGTCIAAASMDNTVKVWD 215
Score = 140 (54.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 31/94 (32%), Positives = 45/94 (47%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D V++ D R + H V LSF P + LL+ S D+T+++ L+ R L
Sbjct: 208 DNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTL 267
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATD 532
GH P + FS G YFAS G D +W ++
Sbjct: 268 HGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 301
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 301 (111.0 bits), Expect = 4.4e-24, P = 4.4e-24
Identities = 78/278 (28%), Positives = 124/278 (44%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQK-----------LKAMKSSDQLQDIEMECD 438
+T A+ S + +A ++++ LWSL P + +++ S Q +
Sbjct: 21 ITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLLASASR 80
Query: 439 DILVRI-MDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
D VR+ + +R +++ H PVR + FS D LL++ S+D +I++WS+ R L
Sbjct: 81 DRTVRLWVLDRKGKSSE-FKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYS 139
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
H H V KFSP G S D+ ++W T + + F + V F+PN
Sbjct: 140 LYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGT 199
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
+A+ SD +++WD ++ H V LSF G L +A DG V M DL
Sbjct: 200 CIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIE 259
Query: 618 XXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
V + FS+DG +L S G D V +W
Sbjct: 260 GRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
Score = 287 (106.1 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 71/249 (28%), Positives = 119/249 (47%)
Query: 376 PSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQ-KLKAMKS-SDQLQDI 433
P Y + + VT + S ++LA + ++LW L + K K+ + ++ +
Sbjct: 49 PHARAYRYVGHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSV 108
Query: 434 EMECD-DILVRIMDERNAETTR--------TLVGHEGPVRKLSFSPDRSLLLSCSQDNTI 484
+ D +LV ++++ + +L H VR FSPD L++SCS+D TI
Sbjct: 109 DFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTI 168
Query: 485 RLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHY 544
++W +C+ + + F+P+G ASAG D ++W L+ + H
Sbjct: 169 KIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHS 228
Query: 545 SDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASA 604
V+C+ FHP N + T SSD T+++ D + G + L GH PV+ +SFS G L S
Sbjct: 229 CGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSG 288
Query: 605 GGDGNVHMW 613
G D V +W
Sbjct: 289 GADAQVLIW 297
Score = 266 (98.7 bits), Expect = 4.7e-20, P = 4.7e-20
Identities = 75/261 (28%), Positives = 112/261 (42%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
R+ GH+ + FSP+ + + S D + LWSL Y GH V ++FSP
Sbjct: 12 RSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQ 71
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
G ASA DR RLW D F H + V V F + + T S D++I++W
Sbjct: 72 GNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSM 131
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRA 633
+ L H V FS GR + S D + +WD +N
Sbjct: 132 FRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF 191
Query: 634 LCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKA 693
+ F+ +G +AS+G D +VK+WD +++ + +V HS + S L S T +
Sbjct: 192 VDFNPNGTCIASAGSDHAVKIWDI-RMNKLLQHYQV---HSCGVNCLSFHPLGNSLVTAS 247
Query: 694 SP----LLHLIFSRRNILLRG 710
S +L LI R L+G
Sbjct: 248 SDGTVKMLDLIEGRLIYTLQG 268
Score = 135 (52.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 45/167 (26%), Positives = 68/167 (40%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQ-----DIEM 435
Y+L V CA+ S D ++ + IK+W K SD + D
Sbjct: 138 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT-NKQCVNNFSDSVGFANFVDFNP 196
Query: 436 E--C-----DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWS 488
C D V+I D R + + H V LSF P + L++ S D T+++
Sbjct: 197 NGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLD 256
Query: 489 LLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYH 535
L+ R + +GH PV+ + FS G S G D +W T+ H
Sbjct: 257 LIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIWRTNFIH 303
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 292 (107.8 bits), Expect = 6.9e-24, P = 6.9e-24
Identities = 72/249 (28%), Positives = 114/249 (45%)
Query: 376 PSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLW-------SLV----PQKLKAM 424
P Y + VTC S +LA G + +++W S V ++++
Sbjct: 50 PQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV 109
Query: 425 KSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTI 484
Q DD V++ + +L H VR FSPD L++S S D T+
Sbjct: 110 HFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTV 169
Query: 485 RLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHY 544
+LW C+ Y HG V + F P G A+AG D ++W ++ L+ + H
Sbjct: 170 KLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHS 229
Query: 545 SDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASA 604
+ V+ + FHP+ NY+ T SSD T+++ D + G + L GH+ P ++FS G + AS
Sbjct: 230 AAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASG 289
Query: 605 GGDGNVHMW 613
G D V +W
Sbjct: 290 GSDEQVMVW 298
Score = 263 (97.6 bits), Expect = 4.3e-20, P = 4.3e-20
Identities = 77/282 (27%), Positives = 116/282 (41%)
Query: 387 RQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSS---DQLQDIEMECD----- 438
R VTC + S + LA G +S + +W + PQ +A + + D + +
Sbjct: 19 RDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQS-RAYRFTGHKDAVTCVNFSPSGHLLA 77
Query: 439 ----DILVRI-MDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWR 493
D VRI + E+T H VR + F D ++ S D T+++W+ +
Sbjct: 78 SGSRDKTVRIWVPNVKGEST-VFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQK 136
Query: 494 CLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFH 553
L H + V KFSP G SA D+ +LW S + + H V V FH
Sbjct: 137 FLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFH 196
Query: 554 PNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMW 613
P+ +A D T+++WD T ++ H A V LSF G +L +A D + +
Sbjct: 197 PSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKIL 256
Query: 614 DLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
DL + FSR G AS G D V +W
Sbjct: 257 DLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 249 (92.7 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 58/199 (29%), Positives = 91/199 (45%)
Query: 458 GHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYF 517
GH+ V ++FSP LL S S+D T+R+W + V++ H V + F G F
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSF 118
Query: 518 ASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGS 577
+A D+ ++WAT L H + V C +F P+ + + S D+T++LWD +
Sbjct: 119 VTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRE 178
Query: 578 HVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFS 637
V H V + F G +A+AG D V +WD+ V L F
Sbjct: 179 CVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFH 238
Query: 638 RDGNILASSGQDCSVKLWD 656
GN L ++ D ++K+ D
Sbjct: 239 PSGNYLITASSDSTLKILD 257
Score = 226 (84.6 bits), Expect = 8.4e-16, P = 8.4e-16
Identities = 57/203 (28%), Positives = 87/203 (42%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
R GH V + FS + L S S D+ + +W + + GH V + FSP
Sbjct: 13 RHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPS 72
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
G+ AS D+ R+W + +F H + V V F + T S D+T+++W
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWAT 132
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRA 633
+ L+ H V FS GR + SA D V +WD S+ V
Sbjct: 133 HRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTY 192
Query: 634 LCFSRDGNILASSGQDCSVKLWD 656
+ F G +A++G D +VK+WD
Sbjct: 193 VDFHPSGTCIAAAGMDNTVKVWD 215
Score = 137 (53.3 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 30/94 (31%), Positives = 45/94 (47%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D V++ D R + H V LSF P + L++ S D+T+++ L+ R L
Sbjct: 208 DNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTL 267
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATD 532
GH P + FS G YFAS G D +W ++
Sbjct: 268 HGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 301
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 282 (104.3 bits), Expect = 7.6e-24, P = 7.6e-24
Identities = 64/206 (31%), Positives = 100/206 (48%)
Query: 455 TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG 514
T+ GH + + FSP L + S D T+++W++ C GH V D +S
Sbjct: 74 TIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADS 133
Query: 515 YYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCV 574
+A D+ +++ + + GH + V C F+P S+ V +GS D ++R+WD
Sbjct: 134 KSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVR 193
Query: 575 TGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDV-VRA 633
TG V+ L H PV A+SF+ G + S DG V +WD +N + V
Sbjct: 194 TGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAF 253
Query: 634 LCFSRDGNILASSGQDCSVKLWDFAK 659
+ FS +G + SS D ++KLWDF K
Sbjct: 254 VKFSPNGKYILSSNLDNTLKLWDFGK 279
Score = 250 (93.1 bits), Expect = 6.3e-19, P = 6.3e-19
Identities = 63/237 (26%), Positives = 112/237 (47%)
Query: 426 SSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIR 485
S+D + I DD ++I + + +TL GH V +F+P SL++S S D ++R
Sbjct: 130 SADS-KSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVR 188
Query: 486 LWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYS 545
+W + C+ H PV + F+ G S +D + R+W T + ++ V +
Sbjct: 189 IWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDEN 248
Query: 546 D-VDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYAL--SFSVCG-RFL 601
V V+F PN Y+ + + D T++LWD G ++ GH+ Y + +FSV G +++
Sbjct: 249 PPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWI 308
Query: 602 ASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRAL-CFSRDGNILASSG--QDCSVKLW 655
S D +++W+L V A C N++AS D ++++W
Sbjct: 309 ISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQ-NMIASGALEPDNTIRIW 364
Score = 237 (88.5 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 75/332 (22%), Positives = 144/332 (43%)
Query: 335 DP--NAPPVDRIPLPPLKDSEKIDKLKALREATKRVTLGPESLPSIA-CYTLLNARQQVT 391
DP N P + P +++++ ++ +A EA P +L S++ + A + T
Sbjct: 2 DPAQNQPNTEPPAAPAVEEAQGVNNSEA--EAP-----APAALSSVSPANPPITAVPEAT 54
Query: 392 CAEISEDVSILAVGFSESYIKLWSLVP---QKLKAMKSSDQLQDIEMECDDILVRIMDER 448
S++ +I G+ KL S + + + A+K S + + D V+I +
Sbjct: 55 APTTSQESTIPGAGY-----KLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMS 109
Query: 449 NAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDI 508
+ RTL GH+ V ++S D +++ S D T++++ + + KGH + V+
Sbjct: 110 DLSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCC 169
Query: 509 KFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTI 568
F+P S D R+W + ++ H V V F+ + + + +GS D +
Sbjct: 170 NFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLV 229
Query: 569 RLWDCVTGSHVR-LLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXX 627
R+WD G V+ L+ PV + FS G+++ S+ D + +WD
Sbjct: 230 RIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGH 289
Query: 628 XDVVRALC--FS-RDGNILASSGQDCSVKLWD 656
+ + FS G + S +DC + +W+
Sbjct: 290 ENNKYCIFANFSVTGGKWIISGSEDCKIYVWN 321
Score = 208 (78.3 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 42/167 (25%), Positives = 79/167 (47%)
Query: 492 WRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQ 551
++ + +GH + +KFSP G + ++ D+ ++W R GH V+
Sbjct: 69 YKLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFA 128
Query: 552 FHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVH 611
+ +S + T S D+T+++++ T + L GH V+ +F+ + S D +V
Sbjct: 129 WSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVR 188
Query: 612 MWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFA 658
+WD+ D V A+ F+RDG+++ S D V++WD A
Sbjct: 189 IWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTA 235
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 298 (110.0 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 83/313 (26%), Positives = 137/313 (43%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMK---SSDQLQDIEMECDDILVRIM- 445
++CA+ + + LA G + + +W+L P K +A + +D + + LV
Sbjct: 21 ISCADFNPNNKQLATGSCDKSLMIWNLAP-KARAFRFVGHTDVITGVNFAPSGSLVASSS 79
Query: 446 -DERNAETTRTLVG-------HEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
D+ T ++ G H VR + FS D L++ S D ++++W + + L
Sbjct: 80 RDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYS 139
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
H + V +FSP G AS G DR RLW T S+ + +F + V F+ +
Sbjct: 140 LNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGT 199
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
+A+ +D TI++WD T ++ H A V SF G +L S D + + DL
Sbjct: 200 CIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLE 259
Query: 618 XXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAKLS-DEVGTEEVNLSHSAD 676
V + FSRDG++ AS G D V +W K + D + E+ HS
Sbjct: 260 GRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMW---KTNFDSLNYRELLSKHSKR 316
Query: 677 IKNSSLAYLVRSY 689
+ +L+ Y
Sbjct: 317 VTPDPPPHLMDIY 329
Score = 243 (90.6 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 57/216 (26%), Positives = 95/216 (43%)
Query: 441 LVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKG 500
+ +M++ E R GH+ + F+P+ L + S D ++ +W+L + G
Sbjct: 1 MASVMEDPTLE--RHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVG 58
Query: 501 HGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVA 560
H + + F+P G AS+ D+ RLW +F H + V V F + +
Sbjct: 59 HTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLV 118
Query: 561 TGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXX 620
T S D+++++W + L H V FS GR +AS G D V +WD S+
Sbjct: 119 TASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQC 178
Query: 621 XXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ F+ G +ASSG D ++K+WD
Sbjct: 179 INIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWD 214
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 49/176 (27%), Positives = 69/176 (39%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK----LKAMKSSDQLQDIEME 436
Y+L V CA S D ++A + ++LW + S D
Sbjct: 138 YSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSS 197
Query: 437 --C-----DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL 489
C D ++I D R + + H V SF P + L+S S D+TI++ L
Sbjct: 198 GTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDL 257
Query: 490 LLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWAT--DSYHPLRLFVGH 543
L R + GH PV + FS G FAS G D +W T DS + L H
Sbjct: 258 LEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWKTNFDSLNYRELLSKH 313
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 242 (90.2 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 52/158 (32%), Positives = 78/158 (49%)
Query: 456 LVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGY 515
L GH PV ++ F P S+++S S+D TI++W KGH V DI F G
Sbjct: 39 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 98
Query: 516 YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT 575
AS D +LW + +R GH +V V PN +++ + S D+TI++W+ T
Sbjct: 99 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 158
Query: 576 GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMW 613
G V+ TGH+ V + + G +AS D V +W
Sbjct: 159 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 196
Score = 230 (86.0 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 47/158 (29%), Positives = 80/158 (50%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
+D +++ D + RTL GH V+ +SF LL SCS D TI+LW + C+
Sbjct: 63 EDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT 122
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
GH H V + P+G + SA D+ ++W + + ++ F GH V V+ + +
Sbjct: 123 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 182
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFS 595
+A+ S+D+T+R+W T L H+ V +S++
Sbjct: 183 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 220
Score = 183 (69.5 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 50/194 (25%), Positives = 91/194 (46%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIE--MECDD 439
T R+ V ++D +++A ++ +++W + ++ KA +L++ E +EC
Sbjct: 164 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA-----ELREHEHVVEC-- 216
Query: 440 ILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYK 499
+ E + + G E K S P LLS S+D TI++W + CL+
Sbjct: 217 --ISWAPESSYSSISEATGSE---TKKSGKPG-PFLLSGSRDKTIKMWDVSTGMCLMTLV 270
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + V + F G + S D+ R+W + ++ H V + FH + YV
Sbjct: 271 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 330
Query: 560 ATGSSDRTIRLWDC 573
TGS D+T+++W+C
Sbjct: 331 VTGSVDQTVKVWEC 344
Score = 177 (67.4 bits), Expect = 3.2e-20, Sum P(2) = 3.2e-20
Identities = 50/201 (24%), Positives = 90/201 (44%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKL-KAMKS-SDQLQDIEME-- 436
Y L R VT S++ ++ IK+W + +K +D +QDI +
Sbjct: 37 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 96
Query: 437 ------CD-DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL 489
C D+ +++ D + E RT+ GH+ V ++ P+ ++S S+D TI++W +
Sbjct: 97 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 156
Query: 490 LLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC 549
C+ + GH V ++ + G AS +D+ R+W + H V+C
Sbjct: 157 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 216
Query: 550 VQFHPNSNYV----ATGSSDR 566
+ + P S+Y ATGS +
Sbjct: 217 ISWAPESSYSSISEATGSETK 237
Score = 177 (67.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 42/156 (26%), Positives = 71/156 (45%)
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH PV + F P SA D ++W ++ R GH V + F + +
Sbjct: 41 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 100
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXX 619
A+ S+D TI+LWD +R + GH V +++ G + SA D + MW++
Sbjct: 101 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 160
Query: 620 XXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
+ VR + ++DG ++AS D +V++W
Sbjct: 161 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 196
Score = 173 (66.0 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 36/115 (31%), Positives = 56/115 (48%)
Query: 542 GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFL 601
GH S V V FHP + + + S D TI++WD TG R L GH V +SF G+ L
Sbjct: 41 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 100
Query: 602 ASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
AS D + +WD V ++ +G+ + S+ +D ++K+W+
Sbjct: 101 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 155
Score = 135 (52.6 bits), Expect = 3.2e-20, Sum P(2) = 3.2e-20
Identities = 28/99 (28%), Positives = 47/99 (47%)
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
++ +GS D+TI++WD TG + L GH V + F G+F+ S D + +WD N
Sbjct: 245 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 304
Query: 618 XXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
V +L F + + + D +VK+W+
Sbjct: 305 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
Score = 129 (50.5 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 31/104 (29%), Positives = 46/104 (44%)
Query: 582 LTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGN 641
L+GH++PV + F + SA D + +WD D V+ + F G
Sbjct: 39 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 98
Query: 642 ILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYL 685
+LAS D ++KLWDF G E + H D SS+A +
Sbjct: 99 LLASCSADMTIKLWDFQ------GFECIRTMHGHDHNVSSVAIM 136
Score = 120 (47.3 bits), Expect = 0.00037, P = 0.00037
Identities = 25/101 (24%), Positives = 47/101 (46%)
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
G + S D+ ++W + L VGH + V V FH ++ + + D+T+R+WD
Sbjct: 243 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 302
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
++ L H+ V +L F ++ + D V +W+
Sbjct: 303 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
Score = 85 (35.0 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 598 GRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDF 657
G FL S D + MWD+S + VR + F G + S D ++++WD+
Sbjct: 243 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 302
Score = 44 (20.5 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 638 RDGNILASSGQDCSVKLWD 656
+ G L S +D ++K+WD
Sbjct: 241 KPGPFLLSGSRDKTIKMWD 259
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 296 (109.3 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 74/252 (29%), Positives = 119/252 (47%)
Query: 376 PSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQ-KLKAMKS-SDQLQDI 433
P Y + + VT + S ++LA + ++LW L + K K+ + ++ +
Sbjct: 49 PHARAYRYVGHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSV 108
Query: 434 EMECD-DILVRIMDERNAETTR--------TLVGHEGPVRKLSFSPDRSLLLSCSQDNTI 484
+ D LV ++++ + +L H VR FSPD L++SCS+D TI
Sbjct: 109 DFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTI 168
Query: 485 RLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHY 544
++W +C+ + + FSP+G ASAG D R+W L+ + H
Sbjct: 169 KIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHS 228
Query: 545 SDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASA 604
V+C+ FHP+ N + T SSD T+++ D V G + L GH PV+ +SFS G S
Sbjct: 229 CGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSG 288
Query: 605 GGDGNVHMWDLS 616
G D V +W S
Sbjct: 289 GADAQVLVWRTS 300
Score = 296 (109.3 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 82/297 (27%), Positives = 128/297 (43%)
Query: 371 GPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK---------- 420
GPE P + Y + +T A+ S + +A ++++ LWSL P
Sbjct: 4 GPED-PILERY-FKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKD 61
Query: 421 -LKAMKSSDQLQDIEMECDDILVRI-MDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSC 478
+ +++ S Q + D VR+ + +R +++ H PVR + FS D L++
Sbjct: 62 VVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSE-FKAHTAPVRSVDFSADGQFLVTA 120
Query: 479 SQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLR 538
S+D +I++WS+ R L H H V KFSP G S D+ ++W T S +
Sbjct: 121 SEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVN 180
Query: 539 LFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCG 598
F + V F PN +A+ SD +R+WD ++ H V LSF G
Sbjct: 181 NFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSG 240
Query: 599 RFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
L +A DG V + DL V + FS+DG + S G D V +W
Sbjct: 241 NSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVW 297
Score = 257 (95.5 bits), Expect = 4.9e-19, P = 4.9e-19
Identities = 62/203 (30%), Positives = 92/203 (45%)
Query: 457 VGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYY 516
VGH+ V L FSP +LL S S+D T+RLW L +K H PV + FS G +
Sbjct: 57 VGHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQF 116
Query: 517 FASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTG 576
+A D+ ++W+ L H V C +F P+ + + S D+TI++WD +
Sbjct: 117 LVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSK 176
Query: 577 SHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCF 636
V + + FS G +ASAG D V +WD+ V L F
Sbjct: 177 QCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSF 236
Query: 637 SRDGNILASSGQDCSVKLWDFAK 659
GN L ++ D +VK+ D +
Sbjct: 237 HPSGNSLVTASSDGTVKILDLVE 259
Score = 257 (95.5 bits), Expect = 4.9e-19, P = 4.9e-19
Identities = 59/203 (29%), Positives = 89/203 (43%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
R GH+ + FSP+ + + S D + LWSL Y GH V ++FSP
Sbjct: 12 RYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQ 71
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
G ASA D+ RLW D F H + V V F + ++ T S D++I++W
Sbjct: 72 GNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSM 131
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRA 633
+ L H V FS GR + S D + +WD ++
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANF 191
Query: 634 LCFSRDGNILASSGQDCSVKLWD 656
+ FS +G +AS+G D +V++WD
Sbjct: 192 VDFSPNGTCIASAGSDHAVRIWD 214
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 246 (91.7 bits), Expect = 1.8e-23, Sum P(3) = 1.8e-23
Identities = 53/158 (33%), Positives = 78/158 (49%)
Query: 456 LVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGY 515
L GH PV ++ F P SL++S S+D TI++W KGH V DI F G
Sbjct: 104 LSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGK 163
Query: 516 YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT 575
AS D +LW + +R GH +V V PN +++ + S D+T+++W+ T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVAT 223
Query: 576 GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMW 613
G V+ TGH+ V + + G LAS D V +W
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVW 261
Score = 224 (83.9 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 47/158 (29%), Positives = 80/158 (50%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
+D +++ D + RTL GH V+ +SF LL SCS D TI+LW + C+
Sbjct: 128 EDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRT 187
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
GH H V + P+G + SA D+ ++W + + ++ F GH V V+ + +
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFS 595
+A+ S+D+T+R+W T L H+ V +S++
Sbjct: 248 LLASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Score = 198 (74.8 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 54/194 (27%), Positives = 91/194 (46%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIE--MECDD 439
T R+ V ++D ++LA ++ +++W + ++ KA +L++ E +EC
Sbjct: 229 TFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKA-----ELREHEHVVEC-- 281
Query: 440 ILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYK 499
+ E T G E K S P LLS S+D TI++W + CL+
Sbjct: 282 --ISWAPESAHPTISEATGSEN---KKSGKPG-PFLLSGSRDKTIKMWDISTGMCLMTLV 335
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + V + F P G + S D+ R+W + ++ H V + FH S YV
Sbjct: 336 GHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYV 395
Query: 560 ATGSSDRTIRLWDC 573
TGS D+T+++W+C
Sbjct: 396 VTGSVDQTVKVWEC 409
Score = 178 (67.7 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 43/156 (27%), Positives = 71/156 (45%)
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH PV + F P SA D ++W ++ R GH V + F +
Sbjct: 106 GHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLL 165
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXX 619
A+ S+D TI+LWD +R + GH V +++ G + SA D + MW+++
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGY 225
Query: 620 XXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
+ VR + ++DG +LAS D +V++W
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVW 261
Score = 170 (64.9 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 36/117 (30%), Positives = 56/117 (47%)
Query: 542 GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFL 601
GH S V V FHP + + + S D TI++WD G R L GH V +SF G+ L
Sbjct: 106 GHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLL 165
Query: 602 ASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFA 658
AS D + +WD V ++ +G+ + S+ +D ++K+W+ A
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVA 222
Score = 168 (64.2 bits), Expect = 5.3e-14, Sum P(3) = 5.3e-14
Identities = 48/201 (23%), Positives = 90/201 (44%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKL-KAMKS-SDQLQDIEME-- 436
Y L R VT S++ ++ IK+W + +K +D +QDI +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQT 161
Query: 437 ------CD-DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL 489
C D+ +++ D + E RT+ GH+ V ++ P+ ++S S+D T+++W +
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEV 221
Query: 490 LLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC 549
C+ + GH V ++ + G AS +D+ R+W + H V+C
Sbjct: 222 ATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 550 VQFHPNSNYV----ATGSSDR 566
+ + P S + ATGS ++
Sbjct: 282 ISWAPESAHPTISEATGSENK 302
Score = 145 (56.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 34/128 (26%), Positives = 57/128 (44%)
Query: 529 WATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAP 588
WA +S HP + + + + ++ +GS D+TI++WD TG + L GH
Sbjct: 284 WAPESAHPT---ISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNW 340
Query: 589 VYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQ 648
V + F GRF+ S D + +WD N V +L F + + +
Sbjct: 341 VRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSV 400
Query: 649 DCSVKLWD 656
D +VK+W+
Sbjct: 401 DQTVKVWE 408
Score = 132 (51.5 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 27/101 (26%), Positives = 49/101 (48%)
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
G + S D+ ++W + L VGH + V V FHP +V + + D+T+R+WD
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDY 367
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
++ L+ H+ V +L F ++ + D V +W+
Sbjct: 368 KNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWE 408
Score = 128 (50.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 31/104 (29%), Positives = 47/104 (45%)
Query: 582 LTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGN 641
L+GH++PV + F + SA D + +WD D V+ + F + G
Sbjct: 104 LSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGK 163
Query: 642 ILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYL 685
+LAS D ++KLWDF G E + H D SS+A +
Sbjct: 164 LLASCSADMTIKLWDFQ------GFECIRTMHGHDHNVSSVAIM 201
Score = 86 (35.3 bits), Expect = 1.8e-23, Sum P(3) = 1.8e-23
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 598 GRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDF 657
G FL S D + MWD+S + VR + F G + S D ++++WD+
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDY 367
Score = 45 (20.9 bits), Expect = 3.0e-19, Sum P(3) = 3.0e-19
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 638 RDGNILASSGQDCSVKLWDFA 658
+ G L S +D ++K+WD +
Sbjct: 306 KPGPFLLSGSRDKTIKMWDIS 326
Score = 42 (19.8 bits), Expect = 1.8e-23, Sum P(3) = 1.8e-23
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 143 NLYEDAYQDLKKFIENSLDV 162
N YE+AY KK E LDV
Sbjct: 22 NGYEEAYSTFKK--EAELDV 39
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 293 (108.2 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 74/251 (29%), Positives = 118/251 (47%)
Query: 376 PSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK------LKA----MK 425
P Y + + VT + S ++LA + ++LW +P K KA ++
Sbjct: 7 PHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLW--IPDKRGKFSEFKAHTAPVR 64
Query: 426 SSDQLQD---IEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDN 482
S D D + +D +++ +L H VR FSPD L++SCS+D
Sbjct: 65 SVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 124
Query: 483 TIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVG 542
TI++W +C+ + + F+P G ASAG D+ ++W L+ +
Sbjct: 125 TIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQV 184
Query: 543 HYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLA 602
H V+C+ FHP+ NY+ T SSD T+++ D + G + L GH PV+ +SFS G A
Sbjct: 185 HSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFA 244
Query: 603 SAGGDGNVHMW 613
S G D V +W
Sbjct: 245 SGGADTQVLLW 255
Score = 267 (99.0 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 59/197 (29%), Positives = 90/197 (45%)
Query: 459 HEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFA 518
H PVR + FS D L + S+D +I++WS+ R L H H V KFSP G
Sbjct: 59 HTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 118
Query: 519 SAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH 578
S D+ ++W T + + F + V F+P+ +A+ SD+T+++WD
Sbjct: 119 SCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKL 178
Query: 579 VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSR 638
++ H V +SF G +L +A DG + + DL V + FS+
Sbjct: 179 LQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSK 238
Query: 639 DGNILASSGQDCSVKLW 655
G + AS G D V LW
Sbjct: 239 GGELFASGGADTQVLLW 255
Score = 245 (91.3 bits), Expect = 7.7e-18, P = 7.7e-18
Identities = 58/200 (29%), Positives = 90/200 (45%)
Query: 457 VGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYY 516
VGH+ V + FSP +LL S S+D T+RLW +K H PV + FS G +
Sbjct: 15 VGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQF 74
Query: 517 FASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTG 576
A+A D+ ++W+ L H V C +F P+ + + S D+TI++WD
Sbjct: 75 LATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 134
Query: 577 SHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCF 636
V + + F+ G +ASAG D V +WD+ V + F
Sbjct: 135 QCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISF 194
Query: 637 SRDGNILASSGQDCSVKLWD 656
GN L ++ D ++K+ D
Sbjct: 195 HPSGNYLITASSDGTLKILD 214
Score = 233 (87.1 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 51/159 (32%), Positives = 72/159 (45%)
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
Y GH V ++FSPHG ASA DR RLW D F H + V V F +
Sbjct: 14 YVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQ 73
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
++AT S D++I++W + L H V FS GR + S D + +WD +N
Sbjct: 74 FLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN 133
Query: 618 XXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ F+ G +AS+G D +VK+WD
Sbjct: 134 KQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWD 172
Score = 200 (75.5 bits), Expect = 8.6e-13, P = 8.6e-13
Identities = 43/129 (33%), Positives = 63/129 (48%)
Query: 528 LWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKA 587
LW + +VGH V VQF P+ N +A+ S DRT+RLW H A
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTA 61
Query: 588 PVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSG 647
PV ++ FS G+FLA+A D ++ +W + VR FS DG ++ S
Sbjct: 62 PVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCS 121
Query: 648 QDCSVKLWD 656
+D ++K+WD
Sbjct: 122 EDKTIKIWD 130
Score = 155 (59.6 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 49/169 (28%), Positives = 71/169 (42%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQ-----DIEM 435
Y+L V CA+ S D ++ + IK+W K SD + D
Sbjct: 96 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT-NKQCVNNFSDSVGFANFVDFNP 154
Query: 436 E--C-----DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWS 488
C D V++ D R + + H G V +SF P + L++ S D T+++
Sbjct: 155 SGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILD 214
Query: 489 LLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWAT--DSYH 535
LL R + +GH PV+ + FS G FAS G D LW T D H
Sbjct: 215 LLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDELH 263
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 299 (110.3 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 73/219 (33%), Positives = 102/219 (46%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
DD V+I D TL GH VR + FS D LL S S D+T+++W
Sbjct: 316 DDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSRLLASAS-DSTVKIWDTGTGSLQHT 374
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
+GH V + FS ASA D ++W T + GH V V F +S
Sbjct: 375 LEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQ 434
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
+A+ S D T+++WD TGS L GH+ V ++ FS R LASA D V +WD
Sbjct: 435 LLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEK 494
Query: 618 XXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+V ++ FS D +LAS+ D +V++WD
Sbjct: 495 GSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWD 533
Score = 293 (108.2 bits), Expect = 8.7e-23, P = 8.7e-23
Identities = 80/253 (31%), Positives = 117/253 (46%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
+ L GHE V +S+S D LL S S D T+++W +GH V + FS
Sbjct: 290 QALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHD 349
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
ASA D ++W T + GH V V F +S +A+ S D T+++WD
Sbjct: 350 SRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDT 408
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRA 633
TGS L GH+ V ++ FS + LASA D V +WD D VR+
Sbjct: 409 GTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRS 468
Query: 634 LCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTE-------EVNLSHSADI-KNSSLAYL 685
+ FS D +LAS+ D +V++WD K S + E V+ SH + + ++S
Sbjct: 469 VIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQT 528
Query: 686 VRSYKTKASPLLH 698
VR + +A L H
Sbjct: 529 VRIWDIEARSLQH 541
Score = 282 (104.3 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 80/259 (30%), Positives = 114/259 (44%)
Query: 373 ESLPSIA-----CYTLLNARQQ-VTCAEISEDVSILAVGFSESYIKLWSLVPQKLK-AMK 425
E+ P +A C L + V S D +LA + +K+W L+ ++
Sbjct: 276 ETKPDVANHWSPCLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLE 335
Query: 426 S-SDQLQDIEMECD--------DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLL 476
SD ++ + D D V+I D TL GH VR + FS D LL
Sbjct: 336 GHSDLVRSVIFSHDSRLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLA 395
Query: 477 SCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHP 536
S S D+T+++W +GH V + FS ASA D ++W T +
Sbjct: 396 SASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSL 455
Query: 537 LRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSV 596
GH V V F +S +A+ S DRT+R+WD GSH L GH + V ++SFS
Sbjct: 456 QHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSH 515
Query: 597 CGRFLASAGGDGNVHMWDL 615
R LASA D V +WD+
Sbjct: 516 DSRLLASASNDQTVRIWDI 534
Score = 141 (54.7 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 30/78 (38%), Positives = 44/78 (56%)
Query: 579 VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSR 638
++ L GH+A V ++S+S R LASA D V +WD D+VR++ FS
Sbjct: 289 LQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSH 348
Query: 639 DGNILASSGQDCSVKLWD 656
D +LAS+ D +VK+WD
Sbjct: 349 DSRLLASAS-DSTVKIWD 365
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 294 (108.6 bits), Expect = 2.0e-23, P = 2.0e-23
Identities = 74/251 (29%), Positives = 118/251 (47%)
Query: 376 PSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK------LKA----MK 425
P Y + + VT + S ++LA + ++LW +P K KA ++
Sbjct: 49 PHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLW--IPDKRGKFSEFKAHTAPVR 106
Query: 426 SSDQLQD---IEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDN 482
S D D + +D +++ +L H VR FSPD L++SCS+D
Sbjct: 107 SVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 166
Query: 483 TIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVG 542
TI++W +C+ + + F+P G ASAG D+ ++W L+ +
Sbjct: 167 TIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQV 226
Query: 543 HYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLA 602
H V+C+ FHP+ NY+ T SSD T+++ D + G + L GH PV+ +SFS G A
Sbjct: 227 HSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFA 286
Query: 603 SAGGDGNVHMW 613
S G D V +W
Sbjct: 287 SGGADTQVLLW 297
Score = 273 (101.2 bits), Expect = 5.7e-21, P = 5.7e-21
Identities = 62/203 (30%), Positives = 89/203 (43%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
R GH+ + L SP+ L + S D + LW+ Y GH V ++FSPH
Sbjct: 12 RYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPH 71
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
G ASA DR RLW D F H + V V F + ++AT S D++I++W
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSM 131
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRA 633
+ L H V FS GR + S D + +WD +N
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF 191
Query: 634 LCFSRDGNILASSGQDCSVKLWD 656
+ F+ G +AS+G D +VK+WD
Sbjct: 192 VDFNPSGTCIASAGSDQTVKVWD 214
Score = 264 (98.0 bits), Expect = 6.2e-20, P = 6.2e-20
Identities = 69/278 (24%), Positives = 121/278 (43%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVP--QKLKAMKSSDQLQDIEME---------CD 438
+T ++S + LA ++++ LW+ P + + + D + ++
Sbjct: 21 ITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASR 80
Query: 439 DILVRI-MDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
D VR+ + ++ + + H PVR + FS D L + S+D +I++WS+ R L
Sbjct: 81 DRTVRLWIPDKRGKFSE-FKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYS 139
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
H H V KFSP G S D+ ++W T + + F + V F+P+
Sbjct: 140 LYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGT 199
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
+A+ SD+T+++WD ++ H V +SF +L +A DG + + DL
Sbjct: 200 CIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLE 259
Query: 618 XXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
V + FS+ G + AS G D V LW
Sbjct: 260 GRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 239 (89.2 bits), Expect = 4.2e-17, P = 4.2e-17
Identities = 57/200 (28%), Positives = 89/200 (44%)
Query: 457 VGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYY 516
VGH+ V + FSP +LL S S+D T+RLW +K H PV + FS G +
Sbjct: 57 VGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQF 116
Query: 517 FASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTG 576
A+A D+ ++W+ L H V C +F P+ + + S D+TI++WD
Sbjct: 117 LATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
Query: 577 SHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCF 636
V + + F+ G +ASAG D V +WD+ V + F
Sbjct: 177 QCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISF 236
Query: 637 SRDGNILASSGQDCSVKLWD 656
N L ++ D ++K+ D
Sbjct: 237 HPSDNYLVTASSDGTLKILD 256
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 49/169 (28%), Positives = 71/169 (42%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQ-----DIEM 435
Y+L V CA+ S D ++ + IK+W K SD + D
Sbjct: 138 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT-NKQCVNNFSDSVGFANFVDFNP 196
Query: 436 E--C-----DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWS 488
C D V++ D R + + H G V +SF P + L++ S D T+++
Sbjct: 197 SGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILD 256
Query: 489 LLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWAT--DSYH 535
LL R + +GH PV+ + FS G FAS G D LW T D H
Sbjct: 257 LLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDELH 305
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 300 (110.7 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 72/226 (31%), Positives = 112/226 (49%)
Query: 401 ILAVGFSESYIKLWSL-VPQKLKAMKS-SDQLQDIEMECDDILV---------RIMDERN 449
+LA G + + LWS+ P + ++ + ++ + + + L+ R+ D
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 450 AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIK 509
A+ RTL+GH+ + L F P + S SQD I+LW + C+ Y+GH V ++
Sbjct: 95 AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 510 FSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIR 569
FSP G + ASA D +LW + + F GH V+ V+FHPN +A+GSSDRTIR
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIR 214
Query: 570 LWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDG-NVHMWD 614
WD V + G PV ++ F+ G L S D V+ W+
Sbjct: 215 FWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQDSLRVYGWE 260
Score = 252 (93.8 bits), Expect = 4.2e-18, P = 4.2e-18
Identities = 60/213 (28%), Positives = 94/213 (44%)
Query: 448 RNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNT-IRLWSLLLWRCLVVYKGHGHPVW 506
+ A + +V H V L LL+ D+ + LWS+ C++ GH PV
Sbjct: 8 KTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVE 67
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
++ + + R+W ++ LR +GH +++ + FHP +VA+GS D
Sbjct: 68 SVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDT 127
Query: 567 TIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXX 626
I+LWD V GH V L FS G++LASA D V +WDL+
Sbjct: 128 NIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
Query: 627 XXDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659
V + F + +LAS D +++ WD K
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
Score = 135 (52.6 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 44/170 (25%), Positives = 72/170 (42%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLV-----------PQKLKAMKSSDQL 430
TL+ + + + +A G ++ IKLW + Q ++ ++ S
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 159
Query: 431 QDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL 490
+ + DD V++ D + GH GPV + F P+ LL S S D TIR W L
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLE 219
Query: 491 LWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLF 540
++ + +G PV I F+P G S D + R++ + P R F
Sbjct: 220 KFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQDSL-RVYG---WEPERCF 265
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 299 (110.3 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 72/226 (31%), Positives = 112/226 (49%)
Query: 401 ILAVGFSESYIKLWSL-VPQKLKAMKS-SDQLQDIEMECDDILV---------RIMDERN 449
+LA G + + LWS+ P + ++ + ++ + + + L+ R+ D
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 450 AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIK 509
A+ RTL+GH+ + L F P + S SQD I+LW + C+ Y+GH V ++
Sbjct: 95 AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 510 FSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIR 569
FSP G + ASA D +LW + + F GH V+ V+FHPN +A+GSSDRTIR
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIR 214
Query: 570 LWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDG-NVHMWD 614
WD V + G PV ++ F+ G L S D V+ W+
Sbjct: 215 FWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
Score = 252 (93.8 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 60/213 (28%), Positives = 94/213 (44%)
Query: 448 RNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNT-IRLWSLLLWRCLVVYKGHGHPVW 506
+ A + +V H V L LL+ D+ + LWS+ C++ GH PV
Sbjct: 8 KTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVE 67
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
++ + + R+W ++ LR +GH +++ + FHP +VA+GS D
Sbjct: 68 SVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDT 127
Query: 567 TIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXX 626
I+LWD V GH V L FS G++LASA D V +WDL+
Sbjct: 128 NIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
Query: 627 XXDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659
V + F + +LAS D +++ WD K
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
Score = 134 (52.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 43/170 (25%), Positives = 72/170 (42%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLV-----------PQKLKAMKSSDQL 430
TL+ + + + +A G ++ IKLW + Q ++ ++ S
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 159
Query: 431 QDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL 490
+ + DD V++ D + GH GPV + F P+ LL S S D TIR W L
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLE 219
Query: 491 LWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLF 540
++ + +G PV + F+P G S D + R++ + P R F
Sbjct: 220 KFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSL-RVYG---WEPERCF 265
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 299 (110.3 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 72/226 (31%), Positives = 112/226 (49%)
Query: 401 ILAVGFSESYIKLWSL-VPQKLKAMKS-SDQLQDIEMECDDILV---------RIMDERN 449
+LA G + + LWS+ P + ++ + ++ + + + L+ R+ D
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 450 AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIK 509
A+ RTL+GH+ + L F P + S SQD I+LW + C+ Y+GH V ++
Sbjct: 95 AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 510 FSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIR 569
FSP G + ASA D +LW + + F GH V+ V+FHPN +A+GSSDRTIR
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIR 214
Query: 570 LWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDG-NVHMWD 614
WD V + G PV ++ F+ G L S D V+ W+
Sbjct: 215 FWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
Score = 252 (93.8 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 60/213 (28%), Positives = 94/213 (44%)
Query: 448 RNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNT-IRLWSLLLWRCLVVYKGHGHPVW 506
+ A + +V H V L LL+ D+ + LWS+ C++ GH PV
Sbjct: 8 KTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVE 67
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
++ + + R+W ++ LR +GH +++ + FHP +VA+GS D
Sbjct: 68 SVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDT 127
Query: 567 TIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXX 626
I+LWD V GH V L FS G++LASA D V +WDL+
Sbjct: 128 NIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
Query: 627 XXDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659
V + F + +LAS D +++ WD K
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
Score = 134 (52.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 43/170 (25%), Positives = 72/170 (42%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLV-----------PQKLKAMKSSDQL 430
TL+ + + + +A G ++ IKLW + Q ++ ++ S
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 159
Query: 431 QDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL 490
+ + DD V++ D + GH GPV + F P+ LL S S D TIR W L
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLE 219
Query: 491 LWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLF 540
++ + +G PV + F+P G S D + R++ + P R F
Sbjct: 220 KFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSL-RVYG---WEPERCF 265
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 299 (110.3 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 72/226 (31%), Positives = 112/226 (49%)
Query: 401 ILAVGFSESYIKLWSL-VPQKLKAMKS-SDQLQDIEMECDDILV---------RIMDERN 449
+LA G + + LWS+ P + ++ + ++ + + + L+ R+ D
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 450 AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIK 509
A+ RTL+GH+ + L F P + S SQD I+LW + C+ Y+GH V ++
Sbjct: 95 AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 510 FSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIR 569
FSP G + ASA D +LW + + F GH V+ V+FHPN +A+GSSDRTIR
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIR 214
Query: 570 LWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDG-NVHMWD 614
WD V + G PV ++ F+ G L S D V+ W+
Sbjct: 215 FWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
Score = 252 (93.8 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 60/213 (28%), Positives = 94/213 (44%)
Query: 448 RNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNT-IRLWSLLLWRCLVVYKGHGHPVW 506
+ A + +V H V L LL+ D+ + LWS+ C++ GH PV
Sbjct: 8 KTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVE 67
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
++ + + R+W ++ LR +GH +++ + FHP +VA+GS D
Sbjct: 68 SVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDT 127
Query: 567 TIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXX 626
I+LWD V GH V L FS G++LASA D V +WDL+
Sbjct: 128 NIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
Query: 627 XXDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659
V + F + +LAS D +++ WD K
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
Score = 134 (52.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 43/170 (25%), Positives = 72/170 (42%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLV-----------PQKLKAMKSSDQL 430
TL+ + + + +A G ++ IKLW + Q ++ ++ S
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 159
Query: 431 QDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL 490
+ + DD V++ D + GH GPV + F P+ LL S S D TIR W L
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLE 219
Query: 491 LWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLF 540
++ + +G PV + F+P G S D + R++ + P R F
Sbjct: 220 KFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSL-RVYG---WEPERCF 265
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 299 (110.3 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 72/226 (31%), Positives = 112/226 (49%)
Query: 401 ILAVGFSESYIKLWSL-VPQKLKAMKS-SDQLQDIEMECDDILV---------RIMDERN 449
+LA G + + LWS+ P + ++ + ++ + + + L+ R+ D
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 450 AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIK 509
A+ RTL+GH+ + L F P + S SQD I+LW + C+ Y+GH V ++
Sbjct: 95 AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 510 FSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIR 569
FSP G + ASA D +LW + + F GH V+ V+FHPN +A+GSSDRTIR
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIR 214
Query: 570 LWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDG-NVHMWD 614
WD V + G PV ++ F+ G L S D V+ W+
Sbjct: 215 FWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
Score = 252 (93.8 bits), Expect = 4.2e-18, P = 4.2e-18
Identities = 60/213 (28%), Positives = 94/213 (44%)
Query: 448 RNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNT-IRLWSLLLWRCLVVYKGHGHPVW 506
+ A + +V H V L LL+ D+ + LWS+ C++ GH PV
Sbjct: 8 KTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVE 67
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
++ + + R+W ++ LR +GH +++ + FHP +VA+GS D
Sbjct: 68 SVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDT 127
Query: 567 TIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXX 626
I+LWD V GH V L FS G++LASA D V +WDL+
Sbjct: 128 NIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
Query: 627 XXDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659
V + F + +LAS D +++ WD K
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
Score = 134 (52.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 43/170 (25%), Positives = 72/170 (42%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLV-----------PQKLKAMKSSDQL 430
TL+ + + + +A G ++ IKLW + Q ++ ++ S
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 159
Query: 431 QDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL 490
+ + DD V++ D + GH GPV + F P+ LL S S D TIR W L
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLE 219
Query: 491 LWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLF 540
++ + +G PV + F+P G S D + R++ + P R F
Sbjct: 220 KFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSL-RVYG---WEPERCF 265
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 289 (106.8 bits), Expect = 3.0e-23, P = 3.0e-23
Identities = 63/212 (29%), Positives = 105/212 (49%)
Query: 446 DERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPV 505
DER R L H P+ ++F+ S ++ S D T ++W L +GH + V
Sbjct: 78 DERKFYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVV 137
Query: 506 WDIKFS-PHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSS 564
+ I F+ P+G A+ D+ +LW+ ++ F GH +++ C+ F+P S VATGS
Sbjct: 138 YAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSM 197
Query: 565 DRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXX 624
D T +LWD +G V L GH A + +L F+ G L + D +WD+ +
Sbjct: 198 DTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVL 257
Query: 625 XXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ + F+ D +++A++ D S K+WD
Sbjct: 258 SGHRGEISCVQFNWDCSLIATASLDKSCKVWD 289
Score = 263 (97.6 bits), Expect = 5.0e-20, P = 5.0e-20
Identities = 57/212 (26%), Positives = 100/212 (47%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFS-PDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
D +I D + E TL GH V ++F+ P + + S D T +LWS +C
Sbjct: 113 DRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYT 172
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
++GH + + F+P A+ D A+LW +S + GH++++ + F+ +
Sbjct: 173 FRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGD 232
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
+ TGS D T LWD +G V +L+GH+ + + F+ +A+A D + +WD
Sbjct: 233 RLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEG 292
Query: 618 XXXXXXXXXXXDVVRALCFSRDGNILASSGQD 649
D V +CF+ G ++A++ D
Sbjct: 293 GQCLATLLGHNDEVLDVCFNYTGQLIATASAD 324
Score = 235 (87.8 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 63/246 (25%), Positives = 112/246 (45%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMEC--- 437
YT ++ C + +++A G ++ KLW V + + +I C
Sbjct: 171 YTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWD-VESGEEVSTLAGHFAEIISLCFNT 229
Query: 438 -DDILVR--------IMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWS 488
D LV + D + L GH G + + F+ D SL+ + S D + ++W
Sbjct: 230 TGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWD 289
Query: 489 LLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVD 548
+CL GH V D+ F+ G A+A D +R+++TD++ L GH ++
Sbjct: 290 AEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEIS 349
Query: 549 CVQFHPNSNYVATGSSDRTIRLWDCV-TGSHVRLLTGHKAPVYALSFSVCGRFLASAGGD 607
V F+ + V T S D+T R+W CV TG+ +++L GH +++ +F+ G + + D
Sbjct: 350 KVCFNAQGSRVLTASVDKTSRVW-CVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSKD 408
Query: 608 GNVHMW 613
+W
Sbjct: 409 NTCRIW 414
Score = 230 (86.0 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 52/210 (24%), Positives = 97/210 (46%)
Query: 449 NAETTR---TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPV 505
+AET + T GH + L+F+P +L+ + S D T +LW + + GH +
Sbjct: 163 SAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEI 222
Query: 506 WDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSD 565
+ F+ G + D A LW S + + GH ++ CVQF+ + + +AT S D
Sbjct: 223 ISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLD 282
Query: 566 RTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXX 625
++ ++WD G + L GH V + F+ G+ +A+A DG ++
Sbjct: 283 KSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLE 342
Query: 626 XXXDVVRALCFSRDGNILASSGQDCSVKLW 655
+ +CF+ G+ + ++ D + ++W
Sbjct: 343 GHKGEISKVCFNAQGSRVLTASVDKTSRVW 372
>UNIPROTKB|Q8IU52 [details] [associations]
symbol:TUWD12 "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 HOVERGEN:HBG057502
UniGene:Hs.604487 HGNC:HGNC:30836 HSSP:Q02793 EMBL:AB053266
EMBL:AB053276 IPI:IPI00796655 SMR:Q8IU52 STRING:Q8IU52
Ensembl:ENST00000393179 Uniprot:Q8IU52
Length = 348
Score = 276 (102.2 bits), Expect = 3.4e-23, P = 3.4e-23
Identities = 57/159 (35%), Positives = 85/159 (53%)
Query: 455 TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG 514
+L H VR FSPD L++SCS+D TI++W +C+ + + F+P G
Sbjct: 9 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSG 68
Query: 515 YYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCV 574
ASAG D+ ++W L+ + H V+C+ FHP+ NY+ T SSD T+++ D +
Sbjct: 69 TCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLL 128
Query: 575 TGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMW 613
G + L GH PV+ +SFS G AS G D V +W
Sbjct: 129 EGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 167
Score = 196 (74.1 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 45/159 (28%), Positives = 71/159 (44%)
Query: 497 VYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNS 556
+Y+ H H V KFSP G S D+ ++W T + + F + V F+P+
Sbjct: 10 LYR-HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSG 68
Query: 557 NYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLS 616
+A+ SD+T+++WD ++ H V +SF G +L +A DG + + DL
Sbjct: 69 TCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLL 128
Query: 617 NXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
V + FS+ G + AS G D V LW
Sbjct: 129 EGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 167
Score = 155 (59.6 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 49/169 (28%), Positives = 71/169 (42%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQ-----DIEM 435
Y+L V CA+ S D ++ + IK+W K SD + D
Sbjct: 8 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT-NKQCVNNFSDSVGFANFVDFNP 66
Query: 436 E--C-----DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWS 488
C D V++ D R + + H G V +SF P + L++ S D T+++
Sbjct: 67 SGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILD 126
Query: 489 LLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWAT--DSYH 535
LL R + +GH PV+ + FS G FAS G D LW T D H
Sbjct: 127 LLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDELH 175
Score = 130 (50.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 33/138 (23%), Positives = 56/138 (40%)
Query: 435 MEC-DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWR 493
+ C +D ++I D N + G + F+P + + S D T+++W + + +
Sbjct: 30 VSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNK 89
Query: 494 CLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFH 553
L Y+ H V I F P G Y +A D ++ + GH V V F
Sbjct: 90 LLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFS 149
Query: 554 PNSNYVATGSSDRTIRLW 571
A+G +D + LW
Sbjct: 150 KGGELFASGGADTQVLLW 167
Score = 128 (50.1 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 30/114 (26%), Positives = 49/114 (42%)
Query: 543 HYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLA 602
H V C +F P+ + + S D+TI++WD V + + F+ G +A
Sbjct: 13 HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIA 72
Query: 603 SAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
SAG D V +WD+ V + F GN L ++ D ++K+ D
Sbjct: 73 SAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILD 126
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 293 (108.2 bits), Expect = 3.9e-23, P = 3.9e-23
Identities = 74/251 (29%), Positives = 118/251 (47%)
Query: 376 PSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK------LKA----MK 425
P Y + + VT + S ++LA + ++LW +P K KA ++
Sbjct: 49 PHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLW--IPDKRGKFSEFKAHTAPVR 106
Query: 426 SSDQLQD---IEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDN 482
S D D + +D +++ +L H VR FSPD L++SCS+D
Sbjct: 107 SVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 166
Query: 483 TIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVG 542
TI++W +C+ + + F+P G ASAG D+ ++W L+ +
Sbjct: 167 TIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQV 226
Query: 543 HYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLA 602
H V+C+ FHP+ NY+ T SSD T+++ D + G + L GH PV+ +SFS G A
Sbjct: 227 HSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFA 286
Query: 603 SAGGDGNVHMW 613
S G D V +W
Sbjct: 287 SGGADTQVLLW 297
Score = 273 (101.2 bits), Expect = 7.6e-21, P = 7.6e-21
Identities = 62/203 (30%), Positives = 89/203 (43%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
R GH+ + L SP+ L + S D + LW+ Y GH V ++FSPH
Sbjct: 12 RYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPH 71
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
G ASA DR RLW D F H + V V F + ++AT S D++I++W
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSM 131
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRA 633
+ L H V FS GR + S D + +WD +N
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF 191
Query: 634 LCFSRDGNILASSGQDCSVKLWD 656
+ F+ G +AS+G D +VK+WD
Sbjct: 192 VDFNPSGTCIASAGSDQTVKVWD 214
Score = 270 (100.1 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 70/278 (25%), Positives = 122/278 (43%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVP--QKLKAMKSSDQLQDIEME---------CD 438
+T ++S + LA ++++ LW+ P + + + D + ++
Sbjct: 21 ITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASR 80
Query: 439 DILVRI-MDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
D VR+ + ++ + + H PVR + FS D L + S+D +I++WS+ R L
Sbjct: 81 DRTVRLWIPDKRGKFSE-FKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYS 139
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
H H V KFSP G S D+ ++W T + + F + V F+P+
Sbjct: 140 LYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGT 199
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
+A+ SD+T+++WD ++ H V +SF G +L +A DG + + DL
Sbjct: 200 CIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLE 259
Query: 618 XXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
V + FS+ G + AS G D V LW
Sbjct: 260 GRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 245 (91.3 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 58/200 (29%), Positives = 90/200 (45%)
Query: 457 VGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYY 516
VGH+ V + FSP +LL S S+D T+RLW +K H PV + FS G +
Sbjct: 57 VGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQF 116
Query: 517 FASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTG 576
A+A D+ ++W+ L H V C +F P+ + + S D+TI++WD
Sbjct: 117 LATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
Query: 577 SHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCF 636
V + + F+ G +ASAG D V +WD+ V + F
Sbjct: 177 QCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISF 236
Query: 637 SRDGNILASSGQDCSVKLWD 656
GN L ++ D ++K+ D
Sbjct: 237 HPSGNYLITASSDGTLKILD 256
Score = 155 (59.6 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 49/169 (28%), Positives = 71/169 (42%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQ-----DIEM 435
Y+L V CA+ S D ++ + IK+W K SD + D
Sbjct: 138 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT-NKQCVNNFSDSVGFANFVDFNP 196
Query: 436 E--C-----DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWS 488
C D V++ D R + + H G V +SF P + L++ S D T+++
Sbjct: 197 SGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILD 256
Query: 489 LLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWAT--DSYH 535
LL R + +GH PV+ + FS G FAS G D LW T D H
Sbjct: 257 LLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDELH 305
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 292 (107.8 bits), Expect = 5.1e-23, P = 5.1e-23
Identities = 80/318 (25%), Positives = 137/318 (43%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQK--LKAMKSSDQLQDIEME---------CD 438
+T + S + LA G ++++ LWSL PQ + + D + ++
Sbjct: 21 ITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLGNLLASASR 80
Query: 439 DILVRI-MDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
D +R+ + ++ +++ H PVR + FS D L S S+D +I++W++ R L
Sbjct: 81 DRTIRLWIPDKRGKSSE-FKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYS 139
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
H H V KFSP G S D+ ++W T + + F + V F+PN
Sbjct: 140 LYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGT 199
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
+A+ SD T+++WD ++ H V +SF G +L +A DG + + DL
Sbjct: 200 CIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLE 259
Query: 618 XXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADI 677
V + FS+ G + S G D V LW DE+ ++V+ + +
Sbjct: 260 GRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLW--RTNFDELNYKDVSKRNLKRL 317
Query: 678 KNSSLAYLVRSYKTKASP 695
S +L+ Y P
Sbjct: 318 HFDSPPHLLDIYPRTPHP 335
Score = 288 (106.4 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 73/251 (29%), Positives = 118/251 (47%)
Query: 376 PSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK------LKA----MK 425
P + + + +T + S ++LA + I+LW +P K KA ++
Sbjct: 49 PQARAFRYVGHKDVITSVQFSPLGNLLASASRDRTIRLW--IPDKRGKSSEFKAHTAPVR 106
Query: 426 SSDQLQD---IEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDN 482
S D D + +D +++ + +L H VR FSPD L++SCS+D
Sbjct: 107 SVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 166
Query: 483 TIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVG 542
TI++W +C+ + + F+P+G ASAG D ++W L+ +
Sbjct: 167 TIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQV 226
Query: 543 HYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLA 602
H V+CV FHP+ NY+ T SSD T+++ D + G + L GH PV+ +SFS G
Sbjct: 227 HSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFT 286
Query: 603 SAGGDGNVHMW 613
S G D V +W
Sbjct: 287 SGGADAQVLLW 297
Score = 266 (98.7 bits), Expect = 4.8e-20, P = 4.8e-20
Identities = 61/203 (30%), Positives = 92/203 (45%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
R GH+ + + FSP+ L + S D + LWSL Y GH + ++FSP
Sbjct: 12 RYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPL 71
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
G ASA DR RLW D F H + V V F + ++A+ S D++I++W+
Sbjct: 72 GNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNM 131
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRA 633
+ L H V FS GR + S D + +WD +N
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANF 191
Query: 634 LCFSRDGNILASSGQDCSVKLWD 656
+ F+ +G +AS+G D +VK+WD
Sbjct: 192 VAFNPNGTCIASAGSDHTVKIWD 214
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 241 (89.9 bits), Expect = 6.5e-23, Sum P(3) = 6.5e-23
Identities = 52/158 (32%), Positives = 78/158 (49%)
Query: 456 LVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGY 515
L GH PV ++ F P S+++S S+D TI++W KGH V DI F G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 516 YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT 575
AS D +LW + +R GH +V V PN +++ + S D+TI++W+ T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 576 GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMW 613
G V+ TGH+ V + + G +AS D V +W
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 229 (85.7 bits), Expect = 2.1e-21, Sum P(3) = 2.1e-21
Identities = 47/158 (29%), Positives = 80/158 (50%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
+D +++ D + RTL GH V+ +SF LL SCS D TI+LW + C+
Sbjct: 128 EDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRT 187
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
GH H V + P+G + SA D+ ++W + + ++ F GH V V+ + +
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFS 595
+A+ S+D+T+R+W T L H+ V +S++
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Score = 188 (71.2 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 51/194 (26%), Positives = 91/194 (46%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIE--MECDD 439
T R+ V ++D +++A ++ +++W + ++ KA +L++ E +EC
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA-----ELREHEHVVEC-- 281
Query: 440 ILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYK 499
+ E + T G E K S P LLS S+D TI++W + CL+
Sbjct: 282 --ISWAPESSYSTISEATGSE---TKKSGKPG-PFLLSGSRDKTIKMWDISTGMCLMTLV 335
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + V + F G + S D+ R+W + ++ H V + FH + YV
Sbjct: 336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYV 395
Query: 560 ATGSSDRTIRLWDC 573
TGS D+T+++W+C
Sbjct: 396 VTGSVDQTVKVWEC 409
Score = 177 (67.4 bits), Expect = 5.9e-20, Sum P(3) = 5.9e-20
Identities = 50/201 (24%), Positives = 90/201 (44%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKL-KAMKS-SDQLQDIEME-- 436
Y L R VT S++ ++ IK+W + +K +D +QDI +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHT 161
Query: 437 ------CD-DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL 489
C D+ +++ D + E RT+ GH+ V ++ P+ ++S S+D TI++W +
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 490 LLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC 549
C+ + GH V ++ + G AS +D+ R+W + H V+C
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 550 VQFHPNSNYV----ATGSSDR 566
+ + P S+Y ATGS +
Sbjct: 282 ISWAPESSYSTISEATGSETK 302
Score = 176 (67.0 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 42/156 (26%), Positives = 70/156 (44%)
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH PV + F P SA D ++W ++ R GH V + F +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLL 165
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXX 619
A+ S+D TI+LWD +R + GH V +++ G + SA D + MW++
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 620 XXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
+ VR + ++DG ++AS D +V++W
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 173 (66.0 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 36/115 (31%), Positives = 56/115 (48%)
Query: 542 GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFL 601
GH S V V FHP + + + S D TI++WD TG R L GH V +SF G+ L
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLL 165
Query: 602 ASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
AS D + +WD V ++ +G+ + S+ +D ++K+W+
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Score = 136 (52.9 bits), Expect = 5.9e-20, Sum P(3) = 5.9e-20
Identities = 28/99 (28%), Positives = 47/99 (47%)
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
++ +GS D+TI++WD TG + L GH V + F G+F+ S D + +WD N
Sbjct: 310 FLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKN 369
Query: 618 XXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
V +L F + + + D +VK+W+
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 128 (50.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 31/104 (29%), Positives = 46/104 (44%)
Query: 582 LTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGN 641
L+GH++PV + F + SA D + +WD D V+ + F G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 642 ILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYL 685
+LAS D ++KLWDF G E + H D SS+A +
Sbjct: 164 LLASCSADMTIKLWDFQ------GFECIRTMHGHDHNVSSVAIM 201
Score = 89 (36.4 bits), Expect = 6.5e-23, Sum P(3) = 6.5e-23
Identities = 18/60 (30%), Positives = 27/60 (45%)
Query: 598 GRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDF 657
G FL S D + MWD+S + VR + F G + S D ++++WDF
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDF 367
Score = 45 (20.9 bits), Expect = 2.2e-18, Sum P(3) = 2.2e-18
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 638 RDGNILASSGQDCSVKLWDFA 658
+ G L S +D ++K+WD +
Sbjct: 306 KPGPFLLSGSRDKTIKMWDIS 326
Score = 40 (19.1 bits), Expect = 6.5e-23, Sum P(3) = 6.5e-23
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 143 NLYEDAYQDLKKFIENSLDV 162
N YE+AY KK E LDV
Sbjct: 22 NGYEEAYSVFKK--EAELDV 39
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 272 (100.8 bits), Expect = 9.1e-23, P = 9.1e-23
Identities = 78/214 (36%), Positives = 106/214 (49%)
Query: 455 TLVGHEGPVRKLSFSPDR-SLLLSCSQDNTIRLWSLLLWRCLVVY-------KGHGHPVW 506
TL GH G V LS +P+ +LLS S+D +I LW+L+ R V Y GH H V
Sbjct: 10 TLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLV--RDDVNYGVAQRRLTGHSHFVS 67
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
D S +Y SA D+ RLW + FVGH SDV V P++ V +GS D+
Sbjct: 68 DCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDK 127
Query: 567 TIRLWDCVTGSHVRLLT--GHKAPVYALSFSVCGRFLA--SAGGDGNVHMWDLSNXXXXX 622
TI++W+ + G+ +T GH V + FS L SAG D V +WDL
Sbjct: 128 TIKIWNII-GNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRT 186
Query: 623 XXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
V A+ S DG++ AS G+D ++ LWD
Sbjct: 187 SHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWD 220
Score = 237 (88.5 bits), Expect = 5.5e-19, P = 5.5e-19
Identities = 67/234 (28%), Positives = 105/234 (44%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +R+ D E T VGH V +S SPD ++S S+D TI++W+++ C
Sbjct: 84 DKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNII-GNCKYTI 142
Query: 499 KGHGHPVWD--IKFSPH--GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHP 554
GH W ++FSP+ F SAG D+ ++W +++ GH V V P
Sbjct: 143 TDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISP 202
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+ + A+G D T+ LWD +H+ L KA + AL FS +L +A G ++ ++D
Sbjct: 203 DGSLCASGGRDGTLMLWDLNESTHLYSLEA-KANINALVFSPNRYWLCAATGS-SIRIFD 260
Query: 615 LSNXXXXXXXXXXXDVVR---------ALCFSRDGNILASSGQDCSVKLWDFAK 659
L V +L +S DG L S D +++W K
Sbjct: 261 LETQEKVDELTVDFVGVGKKSSEPECISLTWSPDGQTLFSGWTDNLIRVWQVTK 314
Score = 228 (85.3 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 67/219 (30%), Positives = 99/219 (45%)
Query: 444 IMDERN-AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHG 502
+ D+ N R L GH V + S D LS S D TIRLW L C + GH
Sbjct: 46 VRDDVNYGVAQRRLTGHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHT 105
Query: 503 HPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSD-VDCVQFHPNSN---Y 558
V + SP S D+ ++W + G +SD V CV+F PN + +
Sbjct: 106 SDVLSVSISPDNRQVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTF 165
Query: 559 VATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNX 618
V+ G D+ +++WD T S GH V A++ S G AS G DG + +WDL+
Sbjct: 166 VSAGW-DKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNES 224
Query: 619 XXXXXXXXXXDVVRALCFSRDGNIL-ASSGQDCSVKLWD 656
++ AL FS + L A++G S++++D
Sbjct: 225 THLYSLEAKANI-NALVFSPNRYWLCAATGS--SIRIFD 260
Score = 147 (56.8 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 50/174 (28%), Positives = 72/174 (41%)
Query: 499 KGHGHPVWDIKFSPHGY-YFASAGHDRMARLW--ATDSYH---PLRLFVGHYSDV-DC-V 550
+GH V + +P S D+ LW D + R GH V DC +
Sbjct: 12 EGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCAL 71
Query: 551 QFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNV 610
F +S+Y + S D+TIRLWD G GH + V ++S S R + S D +
Sbjct: 72 SF--DSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTI 129
Query: 611 HMWDL-SNXXXXXXXXXXXDVVRALCFSR--DGNILASSGQDCSVKLWDFAKLS 661
+W++ N D V + FS D S+G D +VK+WD S
Sbjct: 130 KIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFS 183
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 289 (106.8 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 73/251 (29%), Positives = 119/251 (47%)
Query: 376 PSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK------LKA----MK 425
P + + + VT + S ++LA + ++LW +P K KA ++
Sbjct: 49 PQARAFRYVGHKDVVTSVQFSPLGNLLASASRDRTVRLW--IPDKRGKSSEFKAHTAPVR 106
Query: 426 SSDQLQD---IEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDN 482
S D D + +D +++ + +L H VR FSPD L++SCS+D
Sbjct: 107 SVDFSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 166
Query: 483 TIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVG 542
TI++W +C+ + + F+P+G ASAG D ++W L+ +
Sbjct: 167 TIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQV 226
Query: 543 HYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLA 602
H V+CV FHP+ NY+ T SSD T+++ D + G + L GH PV+ +SFS G +
Sbjct: 227 HSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFS 286
Query: 603 SAGGDGNVHMW 613
S G D V +W
Sbjct: 287 SGGADTQVLLW 297
Score = 271 (100.5 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 69/278 (24%), Positives = 120/278 (43%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQK--LKAMKSSDQLQDIEME---------CD 438
+T + S LA ++++ LW+ PQ + + D + ++
Sbjct: 21 ITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGNLLASASR 80
Query: 439 DILVRI-MDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
D VR+ + ++ +++ H PVR + FS D L + S+D +I++W++ R L
Sbjct: 81 DRTVRLWIPDKRGKSSE-FKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFLYS 139
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
H H V KFSP G S D+ ++W T + + F + V F+PN
Sbjct: 140 LYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGT 199
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
+A+ SD T+++WD ++ H V +SF G ++ +A DG + + DL
Sbjct: 200 CIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLE 259
Query: 618 XXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
V + FS+ G + +S G D V LW
Sbjct: 260 GRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLW 297
Score = 264 (98.0 bits), Expect = 8.0e-20, P = 8.0e-20
Identities = 61/203 (30%), Positives = 90/203 (44%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
R GH+ + + FSP L + S D + LW+ Y GH V ++FSP
Sbjct: 12 RYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPL 71
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
G ASA DR RLW D F H + V V F + ++AT S D++I++W+
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNM 131
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRA 633
+ L H V FS GR + S D + +WD +N
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF 191
Query: 634 LCFSRDGNILASSGQDCSVKLWD 656
+ F+ +G +AS+G D +VK+WD
Sbjct: 192 VDFNPNGTCIASAGSDHTVKIWD 214
Score = 233 (87.1 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 57/200 (28%), Positives = 89/200 (44%)
Query: 457 VGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYY 516
VGH+ V + FSP +LL S S+D T+RLW +K H PV + FS G +
Sbjct: 57 VGHKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQF 116
Query: 517 FASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTG 576
A+A D+ ++W L H V C +F P+ + + S D+TI++WD
Sbjct: 117 LATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
Query: 577 SHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCF 636
V + + F+ G +ASAG D V +WD+ V + F
Sbjct: 177 QCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSF 236
Query: 637 SRDGNILASSGQDCSVKLWD 656
GN + ++ D ++K+ D
Sbjct: 237 HPSGNYIITASSDGTLKILD 256
Score = 148 (57.2 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 46/164 (28%), Positives = 70/164 (42%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQ-----DIEM 435
Y+L V CA+ S D ++ + IK+W K SD + D
Sbjct: 138 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT-NKQCVNNFSDSVGFANFVDFNP 196
Query: 436 E--C-----DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWS 488
C D V+I D R + + H G V +SF P + +++ S D T+++
Sbjct: 197 NGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILD 256
Query: 489 LLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATD 532
LL R + +GH PV+ + FS G F+S G D LW T+
Sbjct: 257 LLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLWRTN 300
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 242 (90.2 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 52/158 (32%), Positives = 78/158 (49%)
Query: 456 LVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGY 515
L GH PV ++ F P S+++S S+D TI++W KGH V DI F G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 516 YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT 575
AS D +LW + +R GH +V V PN +++ + S D+TI++W+ T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 576 GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMW 613
G V+ TGH+ V + + G +AS D V +W
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 230 (86.0 bits), Expect = 4.2e-21, Sum P(3) = 4.2e-21
Identities = 47/158 (29%), Positives = 80/158 (50%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
+D +++ D + RTL GH V+ +SF LL SCS D TI+LW + C+
Sbjct: 128 EDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT 187
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
GH H V + P+G + SA D+ ++W + + ++ F GH V V+ + +
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFS 595
+A+ S+D+T+R+W T L H+ V +S++
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Score = 183 (69.5 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 50/194 (25%), Positives = 91/194 (46%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIE--MECDD 439
T R+ V ++D +++A ++ +++W + ++ KA +L++ E +EC
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA-----ELREHEHVVEC-- 281
Query: 440 ILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYK 499
+ E + + G E K S P LLS S+D TI++W + CL+
Sbjct: 282 --ISWAPESSYSSISEATGSE---TKKSGKPG-PFLLSGSRDKTIKMWDVSTGMCLMTLV 335
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + V + F G + S D+ R+W + ++ H V + FH + YV
Sbjct: 336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 395
Query: 560 ATGSSDRTIRLWDC 573
TGS D+T+++W+C
Sbjct: 396 VTGSVDQTVKVWEC 409
Score = 177 (67.4 bits), Expect = 7.5e-20, Sum P(3) = 7.5e-20
Identities = 50/201 (24%), Positives = 90/201 (44%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKL-KAMKS-SDQLQDIEME-- 436
Y L R VT S++ ++ IK+W + +K +D +QDI +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 437 ------CD-DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL 489
C D+ +++ D + E RT+ GH+ V ++ P+ ++S S+D TI++W +
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 490 LLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC 549
C+ + GH V ++ + G AS +D+ R+W + H V+C
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 550 VQFHPNSNYV----ATGSSDR 566
+ + P S+Y ATGS +
Sbjct: 282 ISWAPESSYSSISEATGSETK 302
Score = 177 (67.4 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 42/156 (26%), Positives = 71/156 (45%)
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH PV + F P SA D ++W ++ R GH V + F + +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXX 619
A+ S+D TI+LWD +R + GH V +++ G + SA D + MW++
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 620 XXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
+ VR + ++DG ++AS D +V++W
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 173 (66.0 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 36/115 (31%), Positives = 56/115 (48%)
Query: 542 GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFL 601
GH S V V FHP + + + S D TI++WD TG R L GH V +SF G+ L
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 602 ASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
AS D + +WD V ++ +G+ + S+ +D ++K+W+
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Score = 135 (52.6 bits), Expect = 7.5e-20, Sum P(3) = 7.5e-20
Identities = 28/99 (28%), Positives = 47/99 (47%)
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
++ +GS D+TI++WD TG + L GH V + F G+F+ S D + +WD N
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 618 XXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
V +L F + + + D +VK+W+
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 129 (50.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 31/104 (29%), Positives = 46/104 (44%)
Query: 582 LTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGN 641
L+GH++PV + F + SA D + +WD D V+ + F G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 642 ILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYL 685
+LAS D ++KLWDF G E + H D SS+A +
Sbjct: 164 LLASCSADMTIKLWDFQ------GFECIRTMHGHDHNVSSVAIM 201
Score = 85 (35.0 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 598 GRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDF 657
G FL S D + MWD+S + VR + F G + S D ++++WD+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Score = 44 (20.5 bits), Expect = 2.0e-18, Sum P(3) = 2.0e-18
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 638 RDGNILASSGQDCSVKLWD 656
+ G L S +D ++K+WD
Sbjct: 306 KPGPFLLSGSRDKTIKMWD 324
Score = 40 (19.1 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 143 NLYEDAYQDLKKFIENSLDV 162
N YE+AY KK E LDV
Sbjct: 22 NGYEEAYSVFKK--EAELDV 39
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 242 (90.2 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 52/158 (32%), Positives = 78/158 (49%)
Query: 456 LVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGY 515
L GH PV ++ F P S+++S S+D TI++W KGH V DI F G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 516 YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT 575
AS D +LW + +R GH +V V PN +++ + S D+TI++W+ T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 576 GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMW 613
G V+ TGH+ V + + G +AS D V +W
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 230 (86.0 bits), Expect = 8.6e-21, Sum P(3) = 8.6e-21
Identities = 47/158 (29%), Positives = 80/158 (50%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
+D +++ D + RTL GH V+ +SF LL SCS D TI+LW + C+
Sbjct: 128 EDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT 187
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
GH H V + P+G + SA D+ ++W + + ++ F GH V V+ + +
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFS 595
+A+ S+D+T+R+W T L H+ V +S++
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Score = 183 (69.5 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 50/194 (25%), Positives = 91/194 (46%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIE--MECDD 439
T R+ V ++D +++A ++ +++W + ++ KA +L++ E +EC
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA-----ELREHEHVVEC-- 281
Query: 440 ILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYK 499
+ E + + G E K S P LLS S+D TI++W + CL+
Sbjct: 282 --ISWAPESSYSSISEATGSE---TKKSGKPG-PFLLSGSRDKTIKMWDVSTGMCLMTLV 335
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + V + F G + S D+ R+W + ++ H V + FH + YV
Sbjct: 336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 395
Query: 560 ATGSSDRTIRLWDC 573
TGS D+T+++W+C
Sbjct: 396 VTGSVDQTVKVWEC 409
Score = 177 (67.4 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 50/201 (24%), Positives = 90/201 (44%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKL-KAMKS-SDQLQDIEME-- 436
Y L R VT S++ ++ IK+W + +K +D +QDI +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 437 ------CD-DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL 489
C D+ +++ D + E RT+ GH+ V ++ P+ ++S S+D TI++W +
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 490 LLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC 549
C+ + GH V ++ + G AS +D+ R+W + H V+C
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 550 VQFHPNSNYV----ATGSSDR 566
+ + P S+Y ATGS +
Sbjct: 282 ISWAPESSYSSISEATGSETK 302
Score = 177 (67.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 42/156 (26%), Positives = 71/156 (45%)
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH PV + F P SA D ++W ++ R GH V + F + +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXX 619
A+ S+D TI+LWD +R + GH V +++ G + SA D + MW++
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 620 XXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
+ VR + ++DG ++AS D +V++W
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 173 (66.0 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 36/115 (31%), Positives = 56/115 (48%)
Query: 542 GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFL 601
GH S V V FHP + + + S D TI++WD TG R L GH V +SF G+ L
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 602 ASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
AS D + +WD V ++ +G+ + S+ +D ++K+W+
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Score = 135 (52.6 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 28/99 (28%), Positives = 47/99 (47%)
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
++ +GS D+TI++WD TG + L GH V + F G+F+ S D + +WD N
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 618 XXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
V +L F + + + D +VK+W+
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 129 (50.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 31/104 (29%), Positives = 46/104 (44%)
Query: 582 LTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGN 641
L+GH++PV + F + SA D + +WD D V+ + F G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 642 ILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYL 685
+LAS D ++KLWDF G E + H D SS+A +
Sbjct: 164 LLASCSADMTIKLWDFQ------GFECIRTMHGHDHNVSSVAIM 201
Score = 85 (35.0 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 598 GRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDF 657
G FL S D + MWD+S + VR + F G + S D ++++WD+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Score = 44 (20.5 bits), Expect = 4.0e-18, Sum P(3) = 4.0e-18
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 638 RDGNILASSGQDCSVKLWD 656
+ G L S +D ++K+WD
Sbjct: 306 KPGPFLLSGSRDKTIKMWD 324
Score = 37 (18.1 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 143 NLYEDAYQDLKKFIENSLDV 162
N YE+AY KK E LD+
Sbjct: 22 NGYEEAYSVFKK--EAELDM 39
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 242 (90.2 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 52/158 (32%), Positives = 78/158 (49%)
Query: 456 LVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGY 515
L GH PV ++ F P S+++S S+D TI++W KGH V DI F G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 516 YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT 575
AS D +LW + +R GH +V V PN +++ + S D+TI++W+ T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 576 GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMW 613
G V+ TGH+ V + + G +AS D V +W
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 230 (86.0 bits), Expect = 8.6e-21, Sum P(3) = 8.6e-21
Identities = 47/158 (29%), Positives = 80/158 (50%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
+D +++ D + RTL GH V+ +SF LL SCS D TI+LW + C+
Sbjct: 128 EDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT 187
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
GH H V + P+G + SA D+ ++W + + ++ F GH V V+ + +
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFS 595
+A+ S+D+T+R+W T L H+ V +S++
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Score = 183 (69.5 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 50/194 (25%), Positives = 91/194 (46%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIE--MECDD 439
T R+ V ++D +++A ++ +++W + ++ KA +L++ E +EC
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA-----ELREHEHVVEC-- 281
Query: 440 ILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYK 499
+ E + + G E K S P LLS S+D TI++W + CL+
Sbjct: 282 --ISWAPESSYSSISEATGSE---TKKSGKPG-PFLLSGSRDKTIKMWDVSTGMCLMTLV 335
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + V + F G + S D+ R+W + ++ H V + FH + YV
Sbjct: 336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 395
Query: 560 ATGSSDRTIRLWDC 573
TGS D+T+++W+C
Sbjct: 396 VTGSVDQTVKVWEC 409
Score = 177 (67.4 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 50/201 (24%), Positives = 90/201 (44%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKL-KAMKS-SDQLQDIEME-- 436
Y L R VT S++ ++ IK+W + +K +D +QDI +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 437 ------CD-DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL 489
C D+ +++ D + E RT+ GH+ V ++ P+ ++S S+D TI++W +
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 490 LLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC 549
C+ + GH V ++ + G AS +D+ R+W + H V+C
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 550 VQFHPNSNYV----ATGSSDR 566
+ + P S+Y ATGS +
Sbjct: 282 ISWAPESSYSSISEATGSETK 302
Score = 177 (67.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 42/156 (26%), Positives = 71/156 (45%)
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH PV + F P SA D ++W ++ R GH V + F + +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXX 619
A+ S+D TI+LWD +R + GH V +++ G + SA D + MW++
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 620 XXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
+ VR + ++DG ++AS D +V++W
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 173 (66.0 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 36/115 (31%), Positives = 56/115 (48%)
Query: 542 GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFL 601
GH S V V FHP + + + S D TI++WD TG R L GH V +SF G+ L
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 602 ASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
AS D + +WD V ++ +G+ + S+ +D ++K+W+
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Score = 135 (52.6 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 28/99 (28%), Positives = 47/99 (47%)
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
++ +GS D+TI++WD TG + L GH V + F G+F+ S D + +WD N
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 618 XXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
V +L F + + + D +VK+W+
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 129 (50.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 31/104 (29%), Positives = 46/104 (44%)
Query: 582 LTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGN 641
L+GH++PV + F + SA D + +WD D V+ + F G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 642 ILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYL 685
+LAS D ++KLWDF G E + H D SS+A +
Sbjct: 164 LLASCSADMTIKLWDFQ------GFECIRTMHGHDHNVSSVAIM 201
Score = 85 (35.0 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 598 GRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDF 657
G FL S D + MWD+S + VR + F G + S D ++++WD+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Score = 44 (20.5 bits), Expect = 4.0e-18, Sum P(3) = 4.0e-18
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 638 RDGNILASSGQDCSVKLWD 656
+ G L S +D ++K+WD
Sbjct: 306 KPGPFLLSGSRDKTIKMWD 324
Score = 37 (18.1 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 143 NLYEDAYQDLKKFIENSLDV 162
N YE+AY KK E LD+
Sbjct: 22 NGYEEAYSVFKK--EAELDM 39
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 242 (90.2 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 52/158 (32%), Positives = 78/158 (49%)
Query: 456 LVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGY 515
L GH PV ++ F P S+++S S+D TI++W KGH V DI F G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 516 YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT 575
AS D +LW + +R GH +V V PN +++ + S D+TI++W+ T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 576 GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMW 613
G V+ TGH+ V + + G +AS D V +W
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 230 (86.0 bits), Expect = 8.6e-21, Sum P(3) = 8.6e-21
Identities = 47/158 (29%), Positives = 80/158 (50%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
+D +++ D + RTL GH V+ +SF LL SCS D TI+LW + C+
Sbjct: 128 EDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT 187
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
GH H V + P+G + SA D+ ++W + + ++ F GH V V+ + +
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFS 595
+A+ S+D+T+R+W T L H+ V +S++
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Score = 183 (69.5 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 50/194 (25%), Positives = 91/194 (46%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIE--MECDD 439
T R+ V ++D +++A ++ +++W + ++ KA +L++ E +EC
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA-----ELREHEHVVEC-- 281
Query: 440 ILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYK 499
+ E + + G E K S P LLS S+D TI++W + CL+
Sbjct: 282 --ISWAPESSYSSISEATGSE---TKKSGKPG-PFLLSGSRDKTIKMWDVSTGMCLMTLV 335
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + V + F G + S D+ R+W + ++ H V + FH + YV
Sbjct: 336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 395
Query: 560 ATGSSDRTIRLWDC 573
TGS D+T+++W+C
Sbjct: 396 VTGSVDQTVKVWEC 409
Score = 177 (67.4 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 50/201 (24%), Positives = 90/201 (44%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKL-KAMKS-SDQLQDIEME-- 436
Y L R VT S++ ++ IK+W + +K +D +QDI +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 437 ------CD-DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL 489
C D+ +++ D + E RT+ GH+ V ++ P+ ++S S+D TI++W +
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 490 LLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC 549
C+ + GH V ++ + G AS +D+ R+W + H V+C
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 550 VQFHPNSNYV----ATGSSDR 566
+ + P S+Y ATGS +
Sbjct: 282 ISWAPESSYSSISEATGSETK 302
Score = 177 (67.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 42/156 (26%), Positives = 71/156 (45%)
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH PV + F P SA D ++W ++ R GH V + F + +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXX 619
A+ S+D TI+LWD +R + GH V +++ G + SA D + MW++
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 620 XXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
+ VR + ++DG ++AS D +V++W
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 173 (66.0 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 36/115 (31%), Positives = 56/115 (48%)
Query: 542 GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFL 601
GH S V V FHP + + + S D TI++WD TG R L GH V +SF G+ L
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 602 ASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
AS D + +WD V ++ +G+ + S+ +D ++K+W+
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Score = 135 (52.6 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 28/99 (28%), Positives = 47/99 (47%)
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
++ +GS D+TI++WD TG + L GH V + F G+F+ S D + +WD N
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 618 XXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
V +L F + + + D +VK+W+
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 129 (50.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 31/104 (29%), Positives = 46/104 (44%)
Query: 582 LTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGN 641
L+GH++PV + F + SA D + +WD D V+ + F G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 642 ILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYL 685
+LAS D ++KLWDF G E + H D SS+A +
Sbjct: 164 LLASCSADMTIKLWDFQ------GFECIRTMHGHDHNVSSVAIM 201
Score = 85 (35.0 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 598 GRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDF 657
G FL S D + MWD+S + VR + F G + S D ++++WD+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Score = 44 (20.5 bits), Expect = 4.0e-18, Sum P(3) = 4.0e-18
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 638 RDGNILASSGQDCSVKLWD 656
+ G L S +D ++K+WD
Sbjct: 306 KPGPFLLSGSRDKTIKMWD 324
Score = 37 (18.1 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 143 NLYEDAYQDLKKFIENSLDV 162
N YE+AY KK E LD+
Sbjct: 22 NGYEEAYSVFKK--EAELDM 39
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 242 (90.2 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 52/158 (32%), Positives = 78/158 (49%)
Query: 456 LVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGY 515
L GH PV ++ F P S+++S S+D TI++W KGH V DI F G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 516 YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT 575
AS D +LW + +R GH +V V PN +++ + S D+TI++W+ T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 576 GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMW 613
G V+ TGH+ V + + G +AS D V +W
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 230 (86.0 bits), Expect = 8.6e-21, Sum P(3) = 8.6e-21
Identities = 47/158 (29%), Positives = 80/158 (50%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
+D +++ D + RTL GH V+ +SF LL SCS D TI+LW + C+
Sbjct: 128 EDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT 187
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
GH H V + P+G + SA D+ ++W + + ++ F GH V V+ + +
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFS 595
+A+ S+D+T+R+W T L H+ V +S++
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Score = 183 (69.5 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 50/194 (25%), Positives = 91/194 (46%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIE--MECDD 439
T R+ V ++D +++A ++ +++W + ++ KA +L++ E +EC
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA-----ELREHEHVVEC-- 281
Query: 440 ILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYK 499
+ E + + G E K S P LLS S+D TI++W + CL+
Sbjct: 282 --ISWAPESSYSSISEATGSE---TKKSGKPG-PFLLSGSRDKTIKMWDVSTGMCLMTLV 335
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + V + F G + S D+ R+W + ++ H V + FH + YV
Sbjct: 336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 395
Query: 560 ATGSSDRTIRLWDC 573
TGS D+T+++W+C
Sbjct: 396 VTGSVDQTVKVWEC 409
Score = 177 (67.4 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 50/201 (24%), Positives = 90/201 (44%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKL-KAMKS-SDQLQDIEME-- 436
Y L R VT S++ ++ IK+W + +K +D +QDI +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 437 ------CD-DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL 489
C D+ +++ D + E RT+ GH+ V ++ P+ ++S S+D TI++W +
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 490 LLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC 549
C+ + GH V ++ + G AS +D+ R+W + H V+C
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 550 VQFHPNSNYV----ATGSSDR 566
+ + P S+Y ATGS +
Sbjct: 282 ISWAPESSYSSISEATGSETK 302
Score = 177 (67.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 42/156 (26%), Positives = 71/156 (45%)
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH PV + F P SA D ++W ++ R GH V + F + +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXX 619
A+ S+D TI+LWD +R + GH V +++ G + SA D + MW++
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 620 XXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
+ VR + ++DG ++AS D +V++W
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 173 (66.0 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 36/115 (31%), Positives = 56/115 (48%)
Query: 542 GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFL 601
GH S V V FHP + + + S D TI++WD TG R L GH V +SF G+ L
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 602 ASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
AS D + +WD V ++ +G+ + S+ +D ++K+W+
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Score = 135 (52.6 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 28/99 (28%), Positives = 47/99 (47%)
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
++ +GS D+TI++WD TG + L GH V + F G+F+ S D + +WD N
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 618 XXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
V +L F + + + D +VK+W+
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 129 (50.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 31/104 (29%), Positives = 46/104 (44%)
Query: 582 LTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGN 641
L+GH++PV + F + SA D + +WD D V+ + F G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 642 ILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYL 685
+LAS D ++KLWDF G E + H D SS+A +
Sbjct: 164 LLASCSADMTIKLWDFQ------GFECIRTMHGHDHNVSSVAIM 201
Score = 85 (35.0 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 598 GRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDF 657
G FL S D + MWD+S + VR + F G + S D ++++WD+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Score = 44 (20.5 bits), Expect = 4.0e-18, Sum P(3) = 4.0e-18
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 638 RDGNILASSGQDCSVKLWD 656
+ G L S +D ++K+WD
Sbjct: 306 KPGPFLLSGSRDKTIKMWD 324
Score = 37 (18.1 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 143 NLYEDAYQDLKKFIENSLDV 162
N YE+AY KK E LD+
Sbjct: 22 NGYEEAYSVFKK--EAELDM 39
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 242 (90.2 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 52/158 (32%), Positives = 78/158 (49%)
Query: 456 LVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGY 515
L GH PV ++ F P S+++S S+D TI++W KGH V DI F G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 516 YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT 575
AS D +LW + +R GH +V V PN +++ + S D+TI++W+ T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 576 GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMW 613
G V+ TGH+ V + + G +AS D V +W
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 230 (86.0 bits), Expect = 8.6e-21, Sum P(3) = 8.6e-21
Identities = 47/158 (29%), Positives = 80/158 (50%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
+D +++ D + RTL GH V+ +SF LL SCS D TI+LW + C+
Sbjct: 128 EDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT 187
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
GH H V + P+G + SA D+ ++W + + ++ F GH V V+ + +
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFS 595
+A+ S+D+T+R+W T L H+ V +S++
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Score = 183 (69.5 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 50/194 (25%), Positives = 91/194 (46%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIE--MECDD 439
T R+ V ++D +++A ++ +++W + ++ KA +L++ E +EC
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA-----ELREHEHVVEC-- 281
Query: 440 ILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYK 499
+ E + + G E K S P LLS S+D TI++W + CL+
Sbjct: 282 --ISWAPESSYSSISEATGSE---TKKSGKPG-PFLLSGSRDKTIKMWDVSTGMCLMTLV 335
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + V + F G + S D+ R+W + ++ H V + FH + YV
Sbjct: 336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 395
Query: 560 ATGSSDRTIRLWDC 573
TGS D+T+++W+C
Sbjct: 396 VTGSVDQTVKVWEC 409
Score = 177 (67.4 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 50/201 (24%), Positives = 90/201 (44%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKL-KAMKS-SDQLQDIEME-- 436
Y L R VT S++ ++ IK+W + +K +D +QDI +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 437 ------CD-DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL 489
C D+ +++ D + E RT+ GH+ V ++ P+ ++S S+D TI++W +
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 490 LLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC 549
C+ + GH V ++ + G AS +D+ R+W + H V+C
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 550 VQFHPNSNYV----ATGSSDR 566
+ + P S+Y ATGS +
Sbjct: 282 ISWAPESSYSSISEATGSETK 302
Score = 177 (67.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 42/156 (26%), Positives = 71/156 (45%)
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH PV + F P SA D ++W ++ R GH V + F + +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXX 619
A+ S+D TI+LWD +R + GH V +++ G + SA D + MW++
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 620 XXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
+ VR + ++DG ++AS D +V++W
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 173 (66.0 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 36/115 (31%), Positives = 56/115 (48%)
Query: 542 GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFL 601
GH S V V FHP + + + S D TI++WD TG R L GH V +SF G+ L
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 602 ASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
AS D + +WD V ++ +G+ + S+ +D ++K+W+
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Score = 135 (52.6 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 28/99 (28%), Positives = 47/99 (47%)
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
++ +GS D+TI++WD TG + L GH V + F G+F+ S D + +WD N
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 618 XXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
V +L F + + + D +VK+W+
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 129 (50.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 31/104 (29%), Positives = 46/104 (44%)
Query: 582 LTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGN 641
L+GH++PV + F + SA D + +WD D V+ + F G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 642 ILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYL 685
+LAS D ++KLWDF G E + H D SS+A +
Sbjct: 164 LLASCSADMTIKLWDFQ------GFECIRTMHGHDHNVSSVAIM 201
Score = 85 (35.0 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 598 GRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDF 657
G FL S D + MWD+S + VR + F G + S D ++++WD+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Score = 44 (20.5 bits), Expect = 4.0e-18, Sum P(3) = 4.0e-18
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 638 RDGNILASSGQDCSVKLWD 656
+ G L S +D ++K+WD
Sbjct: 306 KPGPFLLSGSRDKTIKMWD 324
Score = 37 (18.1 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 143 NLYEDAYQDLKKFIENSLDV 162
N YE+AY KK E LD+
Sbjct: 22 NGYEEAYSVFKK--EAELDM 39
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 242 (90.2 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 52/158 (32%), Positives = 78/158 (49%)
Query: 456 LVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGY 515
L GH PV ++ F P S+++S S+D TI++W KGH V DI F G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 516 YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT 575
AS D +LW + +R GH +V V PN +++ + S D+TI++W+ T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 576 GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMW 613
G V+ TGH+ V + + G +AS D V +W
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 230 (86.0 bits), Expect = 8.6e-21, Sum P(3) = 8.6e-21
Identities = 47/158 (29%), Positives = 80/158 (50%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
+D +++ D + RTL GH V+ +SF LL SCS D TI+LW + C+
Sbjct: 128 EDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT 187
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
GH H V + P+G + SA D+ ++W + + ++ F GH V V+ + +
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFS 595
+A+ S+D+T+R+W T L H+ V +S++
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Score = 183 (69.5 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 50/194 (25%), Positives = 91/194 (46%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIE--MECDD 439
T R+ V ++D +++A ++ +++W + ++ KA +L++ E +EC
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA-----ELREHEHVVEC-- 281
Query: 440 ILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYK 499
+ E + + G E K S P LLS S+D TI++W + CL+
Sbjct: 282 --ISWAPESSYSSISEATGSE---TKKSGKPG-PFLLSGSRDKTIKMWDVSTGMCLMTLV 335
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + V + F G + S D+ R+W + ++ H V + FH + YV
Sbjct: 336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 395
Query: 560 ATGSSDRTIRLWDC 573
TGS D+T+++W+C
Sbjct: 396 VTGSVDQTVKVWEC 409
Score = 177 (67.4 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 50/201 (24%), Positives = 90/201 (44%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKL-KAMKS-SDQLQDIEME-- 436
Y L R VT S++ ++ IK+W + +K +D +QDI +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 437 ------CD-DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL 489
C D+ +++ D + E RT+ GH+ V ++ P+ ++S S+D TI++W +
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 490 LLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC 549
C+ + GH V ++ + G AS +D+ R+W + H V+C
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 550 VQFHPNSNYV----ATGSSDR 566
+ + P S+Y ATGS +
Sbjct: 282 ISWAPESSYSSISEATGSETK 302
Score = 177 (67.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 42/156 (26%), Positives = 71/156 (45%)
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH PV + F P SA D ++W ++ R GH V + F + +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXX 619
A+ S+D TI+LWD +R + GH V +++ G + SA D + MW++
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 620 XXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
+ VR + ++DG ++AS D +V++W
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 173 (66.0 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 36/115 (31%), Positives = 56/115 (48%)
Query: 542 GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFL 601
GH S V V FHP + + + S D TI++WD TG R L GH V +SF G+ L
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 602 ASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
AS D + +WD V ++ +G+ + S+ +D ++K+W+
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Score = 135 (52.6 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 28/99 (28%), Positives = 47/99 (47%)
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
++ +GS D+TI++WD TG + L GH V + F G+F+ S D + +WD N
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 618 XXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
V +L F + + + D +VK+W+
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 129 (50.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 31/104 (29%), Positives = 46/104 (44%)
Query: 582 LTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGN 641
L+GH++PV + F + SA D + +WD D V+ + F G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 642 ILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYL 685
+LAS D ++KLWDF G E + H D SS+A +
Sbjct: 164 LLASCSADMTIKLWDFQ------GFECIRTMHGHDHNVSSVAIM 201
Score = 85 (35.0 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 598 GRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDF 657
G FL S D + MWD+S + VR + F G + S D ++++WD+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Score = 44 (20.5 bits), Expect = 4.0e-18, Sum P(3) = 4.0e-18
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 638 RDGNILASSGQDCSVKLWD 656
+ G L S +D ++K+WD
Sbjct: 306 KPGPFLLSGSRDKTIKMWD 324
Score = 37 (18.1 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 143 NLYEDAYQDLKKFIENSLDV 162
N YE+AY KK E LD+
Sbjct: 22 NGYEEAYSVFKK--EAELDM 39
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 242 (90.2 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 52/158 (32%), Positives = 78/158 (49%)
Query: 456 LVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGY 515
L GH PV ++ F P S+++S S+D TI++W KGH V DI F G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 516 YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT 575
AS D +LW + +R GH +V V PN +++ + S D+TI++W+ T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 576 GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMW 613
G V+ TGH+ V + + G +AS D V +W
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 230 (86.0 bits), Expect = 8.6e-21, Sum P(3) = 8.6e-21
Identities = 47/158 (29%), Positives = 80/158 (50%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
+D +++ D + RTL GH V+ +SF LL SCS D TI+LW + C+
Sbjct: 128 EDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT 187
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
GH H V + P+G + SA D+ ++W + + ++ F GH V V+ + +
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFS 595
+A+ S+D+T+R+W T L H+ V +S++
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Score = 183 (69.5 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 50/194 (25%), Positives = 91/194 (46%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIE--MECDD 439
T R+ V ++D +++A ++ +++W + ++ KA +L++ E +EC
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA-----ELREHEHVVEC-- 281
Query: 440 ILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYK 499
+ E + + G E K S P LLS S+D TI++W + CL+
Sbjct: 282 --ISWAPESSYSSISEATGSE---TKKSGKPG-PFLLSGSRDKTIKMWDVSTGMCLMTLV 335
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + V + F G + S D+ R+W + ++ H V + FH + YV
Sbjct: 336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 395
Query: 560 ATGSSDRTIRLWDC 573
TGS D+T+++W+C
Sbjct: 396 VTGSVDQTVKVWEC 409
Score = 177 (67.4 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 50/201 (24%), Positives = 90/201 (44%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKL-KAMKS-SDQLQDIEME-- 436
Y L R VT S++ ++ IK+W + +K +D +QDI +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 437 ------CD-DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL 489
C D+ +++ D + E RT+ GH+ V ++ P+ ++S S+D TI++W +
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 490 LLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC 549
C+ + GH V ++ + G AS +D+ R+W + H V+C
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 550 VQFHPNSNYV----ATGSSDR 566
+ + P S+Y ATGS +
Sbjct: 282 ISWAPESSYSSISEATGSETK 302
Score = 177 (67.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 42/156 (26%), Positives = 71/156 (45%)
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH PV + F P SA D ++W ++ R GH V + F + +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXX 619
A+ S+D TI+LWD +R + GH V +++ G + SA D + MW++
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 620 XXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
+ VR + ++DG ++AS D +V++W
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 173 (66.0 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 36/115 (31%), Positives = 56/115 (48%)
Query: 542 GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFL 601
GH S V V FHP + + + S D TI++WD TG R L GH V +SF G+ L
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 602 ASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
AS D + +WD V ++ +G+ + S+ +D ++K+W+
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Score = 135 (52.6 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 28/99 (28%), Positives = 47/99 (47%)
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
++ +GS D+TI++WD TG + L GH V + F G+F+ S D + +WD N
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 618 XXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
V +L F + + + D +VK+W+
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 129 (50.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 31/104 (29%), Positives = 46/104 (44%)
Query: 582 LTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGN 641
L+GH++PV + F + SA D + +WD D V+ + F G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 642 ILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYL 685
+LAS D ++KLWDF G E + H D SS+A +
Sbjct: 164 LLASCSADMTIKLWDFQ------GFECIRTMHGHDHNVSSVAIM 201
Score = 85 (35.0 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 598 GRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDF 657
G FL S D + MWD+S + VR + F G + S D ++++WD+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Score = 44 (20.5 bits), Expect = 4.0e-18, Sum P(3) = 4.0e-18
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 638 RDGNILASSGQDCSVKLWD 656
+ G L S +D ++K+WD
Sbjct: 306 KPGPFLLSGSRDKTIKMWD 324
Score = 37 (18.1 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 143 NLYEDAYQDLKKFIENSLDV 162
N YE+AY KK E LD+
Sbjct: 22 NGYEEAYSVFKK--EAELDM 39
>CGD|CAL0000124 [details] [associations]
symbol:ASC1 species:5476 "Candida albicans" [GO:0005092
"GDP-dissociation inhibitor activity" evidence=IGI;ISA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IGI;ISA]
[GO:0007155 "cell adhesion" evidence=IMP] [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036244 "cellular response to neutral pH"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0010255 "glucose mediated
signaling pathway" evidence=IEA] [GO:0032995 "regulation of
fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 268 (99.4 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 71/214 (33%), Positives = 101/214 (47%)
Query: 455 TLVGHEGPVRKLSFSPDR-SLLLSCSQDNTIRLWSLLLWRCLVV------YKGHGHPVWD 507
TL GH G V L+ +P LLLS S+D T+ W L +KGH H V D
Sbjct: 12 TLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQD 71
Query: 508 IKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRT 567
+ S G Y SA DR RLW ++ + FVGH DV V N + + S D+T
Sbjct: 72 VTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKT 131
Query: 568 IRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRF--LASAGGDGNVHMWDLSNXXXXXXXX 625
+++W+ + G + LTGH V A+ S + + SA D V WDL++
Sbjct: 132 VKVWNTI-GECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFI 190
Query: 626 XXXDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659
+ + S DG++ AS+G+D + LWD K
Sbjct: 191 GHTGYISCITLSPDGSLCASAGKDGVIILWDLNK 224
Score = 210 (79.0 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 51/172 (29%), Positives = 82/172 (47%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +R+ D ETT+ VGH+G V +S + + ++S S+D T+++W+ + C+
Sbjct: 87 DRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTVKVWNTI-GECMATL 145
Query: 499 KGHGHPVWDIKFSP--HGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNS 556
GH V ++ SP SA D+ + W Y F+GH + C+ P+
Sbjct: 146 TGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIGHTGYISCITLSPDG 205
Query: 557 NYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDG 608
+ A+ D I LWD + L KA V+AL+FS +LA+A G
Sbjct: 206 SLCASAGKDGVIILWDLNKNKTLYTLEA-KAEVHALAFSPNRYWLAAATTSG 256
Score = 205 (77.2 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 64/235 (27%), Positives = 105/235 (44%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
++ GH V+ ++ S D + LS S D T+RLW L + GH V + + +
Sbjct: 60 KSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKN 119
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPN--SNYVATGSSDRTIRLW 571
SA D+ ++W T + GH V V+ P+ S+ V + S D+T++ W
Sbjct: 120 LRQIVSASRDKTVKVWNTIG-ECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSW 178
Query: 572 DCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVV 631
D S GH + ++ S G ASAG DG + +WDL+ +V
Sbjct: 179 DLADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAEV- 237
Query: 632 RALCFSRDGNILASSGQDCSVKLWDFAKLS--DEVGTEEVNLSHSADIKNSSLAY 684
AL FS + LA++ +K++ + S DE+ E + + D + SLA+
Sbjct: 238 HALAFSPNRYWLAAATTS-GIKIFKLQERSLLDELKPEFAVGATAKDPEAISLAW 291
>UNIPROTKB|P83774 [details] [associations]
symbol:ASC1 "Guanine nucleotide-binding protein subunit
beta-like protein" species:237561 "Candida albicans SC5314"
[GO:0001403 "invasive growth in response to glucose limitation"
evidence=IMP] [GO:0005092 "GDP-dissociation inhibitor activity"
evidence=ISA] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISA]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0036244
"cellular response to neutral pH" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 268 (99.4 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 71/214 (33%), Positives = 101/214 (47%)
Query: 455 TLVGHEGPVRKLSFSPDR-SLLLSCSQDNTIRLWSLLLWRCLVV------YKGHGHPVWD 507
TL GH G V L+ +P LLLS S+D T+ W L +KGH H V D
Sbjct: 12 TLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQD 71
Query: 508 IKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRT 567
+ S G Y SA DR RLW ++ + FVGH DV V N + + S D+T
Sbjct: 72 VTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKT 131
Query: 568 IRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRF--LASAGGDGNVHMWDLSNXXXXXXXX 625
+++W+ + G + LTGH V A+ S + + SA D V WDL++
Sbjct: 132 VKVWNTI-GECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFI 190
Query: 626 XXXDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659
+ + S DG++ AS+G+D + LWD K
Sbjct: 191 GHTGYISCITLSPDGSLCASAGKDGVIILWDLNK 224
Score = 210 (79.0 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 51/172 (29%), Positives = 82/172 (47%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +R+ D ETT+ VGH+G V +S + + ++S S+D T+++W+ + C+
Sbjct: 87 DRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTVKVWNTI-GECMATL 145
Query: 499 KGHGHPVWDIKFSP--HGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNS 556
GH V ++ SP SA D+ + W Y F+GH + C+ P+
Sbjct: 146 TGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIGHTGYISCITLSPDG 205
Query: 557 NYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDG 608
+ A+ D I LWD + L KA V+AL+FS +LA+A G
Sbjct: 206 SLCASAGKDGVIILWDLNKNKTLYTLEA-KAEVHALAFSPNRYWLAAATTSG 256
Score = 205 (77.2 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 64/235 (27%), Positives = 105/235 (44%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
++ GH V+ ++ S D + LS S D T+RLW L + GH V + + +
Sbjct: 60 KSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKN 119
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPN--SNYVATGSSDRTIRLW 571
SA D+ ++W T + GH V V+ P+ S+ V + S D+T++ W
Sbjct: 120 LRQIVSASRDKTVKVWNTIG-ECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSW 178
Query: 572 DCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVV 631
D S GH + ++ S G ASAG DG + +WDL+ +V
Sbjct: 179 DLADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAEV- 237
Query: 632 RALCFSRDGNILASSGQDCSVKLWDFAKLS--DEVGTEEVNLSHSADIKNSSLAY 684
AL FS + LA++ +K++ + S DE+ E + + D + SLA+
Sbjct: 238 HALAFSPNRYWLAAATTS-GIKIFKLQERSLLDELKPEFAVGATAKDPEAISLAW 291
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 289 (106.8 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 69/208 (33%), Positives = 105/208 (50%)
Query: 401 ILAVGFSESYIKLWSL-VPQKLKAMKS-SDQLQDIEMECDDILV---------RIMDERN 449
+LA G + + LWS+ P + ++ + ++ + + + L+ R+ D
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 450 AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIK 509
A+ RTL+GH+ + L F P + S SQD I+LW + C+ Y+GH V ++
Sbjct: 95 AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 510 FSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIR 569
FSP G + ASA D +LW + + F GH V+ V+FHPN +A+GSSDRTIR
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIR 214
Query: 570 LWDCVTGSHVRLLTGHKAPV-YALSFSV 596
WD V + G PV YA S+ V
Sbjct: 215 FWDLEKFQVVSCIEGEPGPVRYAGSWVV 242
Score = 252 (93.8 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 60/213 (28%), Positives = 94/213 (44%)
Query: 448 RNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNT-IRLWSLLLWRCLVVYKGHGHPVW 506
+ A + +V H V L LL+ D+ + LWS+ C++ GH PV
Sbjct: 8 KTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVE 67
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
++ + + R+W ++ LR +GH +++ + FHP +VA+GS D
Sbjct: 68 SVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDT 127
Query: 567 TIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXX 626
I+LWD V GH V L FS G++LASA D V +WDL+
Sbjct: 128 NIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
Query: 627 XXDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659
V + F + +LAS D +++ WD K
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
Score = 248 (92.4 bits), Expect = 8.7e-18, P = 8.7e-18
Identities = 51/178 (28%), Positives = 80/178 (44%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
DD V + +L GH PV + + L+++ SQ +IR+W L + L
Sbjct: 41 DDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRT 100
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
GH + + F P+G + AS D +LW + + GH V C++F P+
Sbjct: 101 LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK 160
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
++A+ + D T++LWD G + GH PV + F LAS D + WDL
Sbjct: 161 WLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
>RGD|1563991 [details] [associations]
symbol:RGD1563991 "similar to TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001680 InterPro:IPR007582 Pfam:PF04494 SMART:SM00320
RGD:1563991 RGD:1589350 GO:GO:0005634 GO:GO:0006355
GeneTree:ENSGT00700000104377 IPI:IPI00952418
Ensembl:ENSRNOT00000058652 ArrayExpress:D3ZC58 Uniprot:D3ZC58
Length = 333
Score = 170 (64.9 bits), Expect = 2.6e-22, Sum P(2) = 2.6e-22
Identities = 43/112 (38%), Positives = 60/112 (53%)
Query: 329 SKKTKSDPNAPPVDRIPLPPLKDSEKIDKLKALREATKRVTLGPESLPSIACYTLLNARQ 388
S +++S PP D +P P L++ L+ L+E+ KRV GP SL +I Y N Q
Sbjct: 215 SSRSESSSLEPP-D-VPNPILQNEAA---LEVLQESIKRVKDGPPSLTTICFYAFYNTEQ 269
Query: 389 QVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDI 440
+ AEIS D +LA GF S IKLWSL +KLK+ + + CD +
Sbjct: 270 LLNTAEISSDSKLLAAGFDNSCIKLWSLRSKKLKSEPHCVDTSRVRLACDTL 321
Score = 162 (62.1 bits), Expect = 2.6e-22, Sum P(2) = 2.6e-22
Identities = 42/171 (24%), Positives = 87/171 (50%)
Query: 110 QLKKEINVNDLGIDPNDSEIGDLLSAYESEGDPNLYEDAYQDLKKFIENSLDVYKYELGL 169
Q +E+ N L + ++S + +SA + +P YE + L+ F+ +S Y +E+
Sbjct: 37 QTPEEMAAN-LTVQ-SESGCANAVSAAPCQAEPQQYEVQFGRLRNFLTDSDSQYSHEVMP 94
Query: 170 VLYPVLVHMYIELVYNGHEHQATEMLHK-HLMDHEPHYQEDLRKLSSVTKRDQ-IRTNEI 227
+LYP+ V++++ LV +G + + H M + Q+D+ + T+ Q I +N
Sbjct: 95 LLYPLFVYLHLNLVQSGPKSTVESFYSRFHGMFLQNASQKDIIEQLQTTQTIQDILSNFQ 154
Query: 228 AETFRSTEFIIRMSRDTLSLLKRHLQEKKHTVLLNIVQEHLYFDMYEGEAT 278
F ++++R+ D+ + L R+LQ +T L ++ H++ D+ + T
Sbjct: 155 LRAFLDNKYVVRLQEDSYNYLIRYLQSDNNTALCKVLAVHIHLDVQPAKRT 205
Score = 45 (20.9 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 637 SRDGNILASSGQDCSVKLWDFA--KLSDE---VGTEEVNLS 672
S D +LA+ + +KLW KL E V T V L+
Sbjct: 277 SSDSKLLAAGFDNSCIKLWSLRSKKLKSEPHCVDTSRVRLA 317
Score = 44 (20.5 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 326 SMFSKKTKSDPNAPPVDRIPLP--PLKDSEKID 356
S+ SKK KS+P+ R+ L L++ E D
Sbjct: 296 SLRSKKLKSEPHCVDTSRVRLACDTLEEEESED 328
Score = 41 (19.5 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 473 SLLLSCSQDNT-IRLWSL 489
S LL+ DN+ I+LWSL
Sbjct: 280 SKLLAAGFDNSCIKLWSL 297
>RGD|1589350 [details] [associations]
symbol:LOC681928 "similar to TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001680 InterPro:IPR007582 Pfam:PF04494 SMART:SM00320
RGD:1563991 RGD:1589350 GO:GO:0005634 GO:GO:0006355
GeneTree:ENSGT00700000104377 IPI:IPI00952418
Ensembl:ENSRNOT00000058652 ArrayExpress:D3ZC58 Uniprot:D3ZC58
Length = 333
Score = 170 (64.9 bits), Expect = 2.6e-22, Sum P(2) = 2.6e-22
Identities = 43/112 (38%), Positives = 60/112 (53%)
Query: 329 SKKTKSDPNAPPVDRIPLPPLKDSEKIDKLKALREATKRVTLGPESLPSIACYTLLNARQ 388
S +++S PP D +P P L++ L+ L+E+ KRV GP SL +I Y N Q
Sbjct: 215 SSRSESSSLEPP-D-VPNPILQNEAA---LEVLQESIKRVKDGPPSLTTICFYAFYNTEQ 269
Query: 389 QVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDI 440
+ AEIS D +LA GF S IKLWSL +KLK+ + + CD +
Sbjct: 270 LLNTAEISSDSKLLAAGFDNSCIKLWSLRSKKLKSEPHCVDTSRVRLACDTL 321
Score = 162 (62.1 bits), Expect = 2.6e-22, Sum P(2) = 2.6e-22
Identities = 42/171 (24%), Positives = 87/171 (50%)
Query: 110 QLKKEINVNDLGIDPNDSEIGDLLSAYESEGDPNLYEDAYQDLKKFIENSLDVYKYELGL 169
Q +E+ N L + ++S + +SA + +P YE + L+ F+ +S Y +E+
Sbjct: 37 QTPEEMAAN-LTVQ-SESGCANAVSAAPCQAEPQQYEVQFGRLRNFLTDSDSQYSHEVMP 94
Query: 170 VLYPVLVHMYIELVYNGHEHQATEMLHK-HLMDHEPHYQEDLRKLSSVTKRDQ-IRTNEI 227
+LYP+ V++++ LV +G + + H M + Q+D+ + T+ Q I +N
Sbjct: 95 LLYPLFVYLHLNLVQSGPKSTVESFYSRFHGMFLQNASQKDIIEQLQTTQTIQDILSNFQ 154
Query: 228 AETFRSTEFIIRMSRDTLSLLKRHLQEKKHTVLLNIVQEHLYFDMYEGEAT 278
F ++++R+ D+ + L R+LQ +T L ++ H++ D+ + T
Sbjct: 155 LRAFLDNKYVVRLQEDSYNYLIRYLQSDNNTALCKVLAVHIHLDVQPAKRT 205
Score = 45 (20.9 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 637 SRDGNILASSGQDCSVKLWDFA--KLSDE---VGTEEVNLS 672
S D +LA+ + +KLW KL E V T V L+
Sbjct: 277 SSDSKLLAAGFDNSCIKLWSLRSKKLKSEPHCVDTSRVRLA 317
Score = 44 (20.5 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 326 SMFSKKTKSDPNAPPVDRIPLP--PLKDSEKID 356
S+ SKK KS+P+ R+ L L++ E D
Sbjct: 296 SLRSKKLKSEPHCVDTSRVRLACDTLEEEESED 328
Score = 41 (19.5 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 473 SLLLSCSQDNT-IRLWSL 489
S LL+ DN+ I+LWSL
Sbjct: 280 SKLLAAGFDNSCIKLWSL 297
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 266 (98.7 bits), Expect = 4.1e-22, P = 4.1e-22
Identities = 73/212 (34%), Positives = 104/212 (49%)
Query: 455 TLVGHEGPVRKLSFSPDR-SLLLSCSQDNTIRLWSLLLWRCLVVY-----KGHGHPVWDI 508
TL GH G V L+ S + ++LLS S+D T+ +W+L Y +GH H V D
Sbjct: 10 TLEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDC 69
Query: 509 KFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTI 568
S G Y SA D+ RLW S R FVGH +DV V F ++ + +GS DRTI
Sbjct: 70 VISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRTI 129
Query: 569 RLWDCVTGSHVRLLT--GHKAPVYALSFSVCGR--FLASAGGDGNVHMWDLSNXXXXXXX 624
+LW+ + G +T GH V + FS + + SAG D V +W+L++
Sbjct: 130 KLWNTL-GDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASCRLQTDH 188
Query: 625 XXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ + S DG++ AS G+D LWD
Sbjct: 189 IGHTGYINTVTISPDGSLCASGGKDGVTMLWD 220
Score = 218 (81.8 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 60/195 (30%), Positives = 92/195 (47%)
Query: 426 SSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIR 485
SSD + D L R+ + + +TTRT VGH V +SFS D ++S S+D TI+
Sbjct: 72 SSDGAYALSASWDKSL-RLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRTIK 130
Query: 486 LWSLLLWRCLVVYKGHGHPVWD--IKFSPHGY--YFASAGHDRMARLWATDSYHPLRLFV 541
LW+ L C GH W ++FSP+ SAG D++ ++W S +
Sbjct: 131 LWNTL-GDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASCRLQTDHI 189
Query: 542 GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAP-VYALSFSVCGRF 600
GH ++ V P+ + A+G D LWD H+ L H ++AL FS R+
Sbjct: 190 GHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYSL--HAGDEIHALVFSP-NRY 246
Query: 601 LASAGGDGNVHMWDL 615
A ++ ++DL
Sbjct: 247 WLCAATSSSITIFDL 261
Score = 218 (81.8 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 68/225 (30%), Positives = 100/225 (44%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
R+L GH V S D + LS S D ++RLW L + + GH + V + FS
Sbjct: 57 RSLEGHSHIVSDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSAD 116
Query: 514 GYYFASAGHDRMARLWAT--DSYHPLRLFVGHYSDVDCVQFHPN-SNYVATGSS-DRTIR 569
S DR +LW T D + + GH V CV+F PN N V + D+ ++
Sbjct: 117 NRQIVSGSRDRTIKLWNTLGDCKYTIT-DKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVK 175
Query: 570 LWDCVTGSHVRLLT---GHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXX 626
+W+ + RL T GH + ++ S G AS G DG +WDL N
Sbjct: 176 VWELAS---CRLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWDL-NESKHLYSLH 231
Query: 627 XXDVVRALCFSRDGNILASSGQDCSVKLWDFAKLS--DEVGTEEV 669
D + AL FS + L ++ S+ ++D K S DE+ E +
Sbjct: 232 AGDEIHALVFSPNRYWLCAATSS-SITIFDLEKKSKVDELKPEYI 275
>UNIPROTKB|G4MQX3 [details] [associations]
symbol:MGG_04719 "Guanine nucleotide-binding protein
subunit beta-like protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 GO:GO:0043581 KO:K14753
RefSeq:XP_003710816.1 ProteinModelPortal:G4MQX3 SMR:G4MQX3
EnsemblFungi:MGG_04719T0 GeneID:2677887 KEGG:mgr:MGG_04719
Uniprot:G4MQX3
Length = 316
Score = 266 (98.7 bits), Expect = 4.1e-22, P = 4.1e-22
Identities = 72/212 (33%), Positives = 105/212 (49%)
Query: 455 TLVGHEGPVRKLSFSPDR-SLLLSCSQDNTIRLWSLLLWRCLVVY-----KGHGHPVWDI 508
TL GH G V L+ S + ++LLS S+D T+ +W+L Y KGH H V D
Sbjct: 10 TLEGHNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDC 69
Query: 509 KFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTI 568
S G Y SA D+ RLW + R FVGH +DV V F ++ + +GS DR+I
Sbjct: 70 VISSDGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDRSI 129
Query: 569 RLWDCVTGSHVRLLT--GHKAPVYALSFSVCGR--FLASAGGDGNVHMWDLSNXXXXXXX 624
+LW+ + G +T GH V + FS + + S+G D V +W+LS+
Sbjct: 130 KLWNTL-GDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQTDH 188
Query: 625 XXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ + S DG++ AS G+D + LWD
Sbjct: 189 IGHTGYINTVTISPDGSLCASGGKDGTTMLWD 220
Score = 220 (82.5 bits), Expect = 6.3e-16, P = 6.3e-16
Identities = 70/223 (31%), Positives = 98/223 (43%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
R+L GH V S D + LS S D T+RLW L + GH + V + FS
Sbjct: 57 RSLKGHSHIVSDCVISSDGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSAD 116
Query: 514 GYYFASAGHDRMARLWAT--DSYHPLRLFVGHYSDVDCVQFHPN-SNYVATGSS-DRTIR 569
S DR +LW T D + + GH V CV+F PN N V S D+ ++
Sbjct: 117 NRQIVSGSRDRSIKLWNTLGDCKYTITE-KGHSEWVSCVRFSPNPQNPVIVSSGWDKLVK 175
Query: 570 LWDCVTGSHVRLLT---GHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXX 626
+W+ S +L T GH + ++ S G AS G DG +WDL N
Sbjct: 176 VWEL---SSCKLQTDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWDL-NESKHLYSLN 231
Query: 627 XXDVVRALCFSRDGNILASSGQDCSVKLWDFAKLS--DEVGTE 667
D + AL FS + L ++ S+ ++D K S DE+ E
Sbjct: 232 ANDEIHALVFSPNRYWLCAATAS-SIIIFDLEKKSKVDELKPE 273
Score = 210 (79.0 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 57/193 (29%), Positives = 92/193 (47%)
Query: 426 SSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIR 485
SSD + D L R+ + TTR VGH V +SFS D ++S S+D +I+
Sbjct: 72 SSDGAYALSASWDKTL-RLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDRSIK 130
Query: 486 LWSLLL-WRCLVVYKGHGHPVWDIKFSPHGY--YFASAGHDRMARLWATDSYHPLRLFVG 542
LW+ L + + KGH V ++FSP+ S+G D++ ++W S +G
Sbjct: 131 LWNTLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQTDHIG 190
Query: 543 HYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLA 602
H ++ V P+ + A+G D T LWD H+ L + ++AL FS R+
Sbjct: 191 HTGYINTVTISPDGSLCASGGKDGTTMLWDLNESKHLYSLNANDE-IHALVFSP-NRYWL 248
Query: 603 SAGGDGNVHMWDL 615
A ++ ++DL
Sbjct: 249 CAATASSIIIFDL 261
>GENEDB_PFALCIPARUM|PF11_0400 [details] [associations]
symbol:PF11_0400 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014186
RefSeq:XP_001348070.2 ProteinModelPortal:Q8IHX6 PRIDE:Q8IHX6
EnsemblProtists:PF11_0400:mRNA GeneID:810946 KEGG:pfa:PF11_0400
EuPathDB:PlasmoDB:PF3D7_1138800 ProtClustDB:CLSZ2515197
Uniprot:Q8IHX6
Length = 1920
Score = 278 (102.9 bits), Expect = 4.1e-22, Sum P(3) = 4.1e-22
Identities = 85/273 (31%), Positives = 138/273 (50%)
Query: 363 EATKRVTLGPESLPSIACYTLLNARQQVTCAEISE-DVSILAVGFSESYIKLWSLVPQKL 421
+AT R+ + +++PSI Y L N +TCAE+S D S++A S + IKLW+L ++
Sbjct: 1499 QATNRLRVTKKNIPSILYYCLNNCND-LTCAELSGYDGSLIATAHSNNIIKLWNLKKSEM 1557
Query: 422 -KAMKSSDQLQDIEMECDDI------------LVRIMDERNAETTRTLVGHEGPVRKLSF 468
K M + +I DD+ + +DE N + L G+ V LSF
Sbjct: 1558 NKVMNEKRDIDEINEYMDDVRKHESYLNGKKSIPLDIDEYNNKGVSKLYGNTFNVSSLSF 1617
Query: 469 SPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGH-PVWDIKFSPHGYYFASAGHDRMAR 527
+LLS + + I L+S + + V Y G GH P+W I + GY+FA+A D R
Sbjct: 1618 GETDKILLSGNLNGDIYLYSTISNKNYVKYVG-GHTPIWSIDTAFLGYFFATAEDDGNLR 1676
Query: 528 LWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH-- 585
+++T+ +P + + V+ ++H N+ VA G D + L+D S ++ +
Sbjct: 1677 IYSTNKTYPFITYK-YNCPVNVCKYHYNNTLVACGYYDNYVHLYDVRINSFIKRFKNNYP 1735
Query: 586 -KAPVYALSFSVCGRFLASAGG-DGNVHMWDLS 616
V +LSFS GRFL+ AGG N+++ DL+
Sbjct: 1736 SNQGVTSLSFSKNGRFLSYAGGYTNNLNLIDLA 1768
Score = 60 (26.2 bits), Expect = 4.1e-22, Sum P(3) = 4.1e-22
Identities = 21/84 (25%), Positives = 43/84 (51%)
Query: 629 DVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGT----EEVNLSHSADIKNSSLAY 684
D + + FS D N+L ++ + + ++ +K S E+ + + + L+++ D KN +
Sbjct: 1831 DKILNIDFSYDNNLLVTASCNNIIDFYNCSKASQEIKSTMDKKRIKLNNTKD-KNRYVK- 1888
Query: 685 LVRSYKTKASPLLHLIFSRRNILL 708
L +S+ S L+ F+ N LL
Sbjct: 1889 LSKSFGVHYSNLISAKFTPENALL 1912
Score = 58 (25.5 bits), Expect = 4.1e-22, Sum P(3) = 4.1e-22
Identities = 37/178 (20%), Positives = 79/178 (44%)
Query: 90 NTLITMLKLLRQY-N-LRGTEEQLKKEINVNDLGIDPNDSEIGDLLSAYESEGDPNLYED 147
+T++ L L + N L+ + + INV + P + +I D + E PNL +
Sbjct: 1241 DTMLNNLNLDKDVLNILKDKINNINRNINVT-ICSTPMEKQI-DKIEK-EDINAPNLI-N 1296
Query: 148 AYQDLKKFIENSLDVYKYELGLVLYPVLVHMYIELVYNGHEHQATEMLHKHLMDHEPHYQ 207
+ + + +N+L K +L + + +L+ +YI L+ +E+ E + Y+
Sbjct: 1297 CFSEFINWCDNNLIQIKLQLYNIAFCLLLEIYILLLTINYEY--IENFKNQYLKKFSAYE 1354
Query: 208 EDLRKLSSVTKRDQI-RTNEIAETFRSTEFIIRMSRDTLSLLKRHLQEKKHTVLLNIV 264
+ L + QI + I ++++ I+ M++ L ++L + L NI+
Sbjct: 1355 PVTKFLLTCVSLTQIFEISLIRFKKKNSKHIVHMTKLGKKSLLQYLSVYEGIPLYNII 1412
Score = 44 (20.5 bits), Expect = 1.1e-20, Sum P(3) = 1.1e-20
Identities = 23/136 (16%), Positives = 64/136 (47%)
Query: 112 KKEINVNDLGIDPNDSEIGDLLSAYESEGDPNLYEDAYQDLKKFIENSLDVY---KYELG 168
KK+ N +D D + + + + + + ++ +D +D + +E + D+ K E
Sbjct: 1009 KKDENKDDKKDDKKEDKNKSDIQIKDDKNEVSILDDNIKDKETNLEKNDDILNLKKNEDQ 1068
Query: 169 LVLYPVLVHMYIELVYNGHEHQATEMLHK-HLMDHEPHYQEDLRKLSSVTKRDQIRTNEI 227
+L H++I N + T + + ++ + P ++ D + + +V + +++N I
Sbjct: 1069 NILNNN--HIHISKTENNNNDIKTNLETEINITEDCPIFKNDDKIIDNVNSNN-LKSNTI 1125
Query: 228 AETFRSTEFIIRMSRD 243
++ ++ E + ++ D
Sbjct: 1126 SDNSKN-EILRNVASD 1140
Score = 42 (19.8 bits), Expect = 4.9e-20, Sum P(4) = 4.9e-20
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 116 NVNDLGIDPN--DSEIGDLLSAYESEGDPNLYEDAYQDLKKF---IENSLD 161
N+N++ + N +E G+ S + GD N+ + +K F IEN+ D
Sbjct: 646 NINNMNKNINLLYNEDGNFKSHNNNSGDNNINNNKQLFMKPFHNNIENTND 696
Score = 39 (18.8 bits), Expect = 4.9e-20, Sum P(4) = 4.9e-20
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 331 KTKSDPNAPPVDRIPLPPLKDSEKIDKLKALREATK 366
K PN+ + + EKIDK++ + + K
Sbjct: 820 KNNDQPNSKQPRGSKMSKINKIEKIDKIEKIDKMNK 855
>UNIPROTKB|Q8IHX6 [details] [associations]
symbol:PF11_0400 "Conserved Plasmodium protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014186
RefSeq:XP_001348070.2 ProteinModelPortal:Q8IHX6 PRIDE:Q8IHX6
EnsemblProtists:PF11_0400:mRNA GeneID:810946 KEGG:pfa:PF11_0400
EuPathDB:PlasmoDB:PF3D7_1138800 ProtClustDB:CLSZ2515197
Uniprot:Q8IHX6
Length = 1920
Score = 278 (102.9 bits), Expect = 4.1e-22, Sum P(3) = 4.1e-22
Identities = 85/273 (31%), Positives = 138/273 (50%)
Query: 363 EATKRVTLGPESLPSIACYTLLNARQQVTCAEISE-DVSILAVGFSESYIKLWSLVPQKL 421
+AT R+ + +++PSI Y L N +TCAE+S D S++A S + IKLW+L ++
Sbjct: 1499 QATNRLRVTKKNIPSILYYCLNNCND-LTCAELSGYDGSLIATAHSNNIIKLWNLKKSEM 1557
Query: 422 -KAMKSSDQLQDIEMECDDI------------LVRIMDERNAETTRTLVGHEGPVRKLSF 468
K M + +I DD+ + +DE N + L G+ V LSF
Sbjct: 1558 NKVMNEKRDIDEINEYMDDVRKHESYLNGKKSIPLDIDEYNNKGVSKLYGNTFNVSSLSF 1617
Query: 469 SPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGH-PVWDIKFSPHGYYFASAGHDRMAR 527
+LLS + + I L+S + + V Y G GH P+W I + GY+FA+A D R
Sbjct: 1618 GETDKILLSGNLNGDIYLYSTISNKNYVKYVG-GHTPIWSIDTAFLGYFFATAEDDGNLR 1676
Query: 528 LWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH-- 585
+++T+ +P + + V+ ++H N+ VA G D + L+D S ++ +
Sbjct: 1677 IYSTNKTYPFITYK-YNCPVNVCKYHYNNTLVACGYYDNYVHLYDVRINSFIKRFKNNYP 1735
Query: 586 -KAPVYALSFSVCGRFLASAGG-DGNVHMWDLS 616
V +LSFS GRFL+ AGG N+++ DL+
Sbjct: 1736 SNQGVTSLSFSKNGRFLSYAGGYTNNLNLIDLA 1768
Score = 60 (26.2 bits), Expect = 4.1e-22, Sum P(3) = 4.1e-22
Identities = 21/84 (25%), Positives = 43/84 (51%)
Query: 629 DVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGT----EEVNLSHSADIKNSSLAY 684
D + + FS D N+L ++ + + ++ +K S E+ + + + L+++ D KN +
Sbjct: 1831 DKILNIDFSYDNNLLVTASCNNIIDFYNCSKASQEIKSTMDKKRIKLNNTKD-KNRYVK- 1888
Query: 685 LVRSYKTKASPLLHLIFSRRNILL 708
L +S+ S L+ F+ N LL
Sbjct: 1889 LSKSFGVHYSNLISAKFTPENALL 1912
Score = 58 (25.5 bits), Expect = 4.1e-22, Sum P(3) = 4.1e-22
Identities = 37/178 (20%), Positives = 79/178 (44%)
Query: 90 NTLITMLKLLRQY-N-LRGTEEQLKKEINVNDLGIDPNDSEIGDLLSAYESEGDPNLYED 147
+T++ L L + N L+ + + INV + P + +I D + E PNL +
Sbjct: 1241 DTMLNNLNLDKDVLNILKDKINNINRNINVT-ICSTPMEKQI-DKIEK-EDINAPNLI-N 1296
Query: 148 AYQDLKKFIENSLDVYKYELGLVLYPVLVHMYIELVYNGHEHQATEMLHKHLMDHEPHYQ 207
+ + + +N+L K +L + + +L+ +YI L+ +E+ E + Y+
Sbjct: 1297 CFSEFINWCDNNLIQIKLQLYNIAFCLLLEIYILLLTINYEY--IENFKNQYLKKFSAYE 1354
Query: 208 EDLRKLSSVTKRDQI-RTNEIAETFRSTEFIIRMSRDTLSLLKRHLQEKKHTVLLNIV 264
+ L + QI + I ++++ I+ M++ L ++L + L NI+
Sbjct: 1355 PVTKFLLTCVSLTQIFEISLIRFKKKNSKHIVHMTKLGKKSLLQYLSVYEGIPLYNII 1412
Score = 44 (20.5 bits), Expect = 1.1e-20, Sum P(3) = 1.1e-20
Identities = 23/136 (16%), Positives = 64/136 (47%)
Query: 112 KKEINVNDLGIDPNDSEIGDLLSAYESEGDPNLYEDAYQDLKKFIENSLDVY---KYELG 168
KK+ N +D D + + + + + + ++ +D +D + +E + D+ K E
Sbjct: 1009 KKDENKDDKKDDKKEDKNKSDIQIKDDKNEVSILDDNIKDKETNLEKNDDILNLKKNEDQ 1068
Query: 169 LVLYPVLVHMYIELVYNGHEHQATEMLHK-HLMDHEPHYQEDLRKLSSVTKRDQIRTNEI 227
+L H++I N + T + + ++ + P ++ D + + +V + +++N I
Sbjct: 1069 NILNNN--HIHISKTENNNNDIKTNLETEINITEDCPIFKNDDKIIDNVNSNN-LKSNTI 1125
Query: 228 AETFRSTEFIIRMSRD 243
++ ++ E + ++ D
Sbjct: 1126 SDNSKN-EILRNVASD 1140
Score = 42 (19.8 bits), Expect = 4.9e-20, Sum P(4) = 4.9e-20
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 116 NVNDLGIDPN--DSEIGDLLSAYESEGDPNLYEDAYQDLKKF---IENSLD 161
N+N++ + N +E G+ S + GD N+ + +K F IEN+ D
Sbjct: 646 NINNMNKNINLLYNEDGNFKSHNNNSGDNNINNNKQLFMKPFHNNIENTND 696
Score = 39 (18.8 bits), Expect = 4.9e-20, Sum P(4) = 4.9e-20
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 331 KTKSDPNAPPVDRIPLPPLKDSEKIDKLKALREATK 366
K PN+ + + EKIDK++ + + K
Sbjct: 820 KNNDQPNSKQPRGSKMSKINKIEKIDKIEKIDKMNK 855
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 241 (89.9 bits), Expect = 4.4e-22, Sum P(2) = 4.4e-22
Identities = 52/158 (32%), Positives = 78/158 (49%)
Query: 456 LVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGY 515
L GH PV ++ F P S+++S S+D TI++W KGH V DI F G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGK 163
Query: 516 YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT 575
AS D +LW + +R GH +V V PN +++ + S D+TI++W+ T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 576 GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMW 613
G V+ TGH+ V + + G +AS D V +W
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 229 (85.7 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 47/158 (29%), Positives = 79/158 (50%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
+D +++ D + RTL GH V +SF LL SCS D TI+LW + C+
Sbjct: 128 EDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRT 187
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
GH H V + P+G + SA D+ ++W + + ++ F GH V V+ + +
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFS 595
+A+ S+D+T+R+W T L H+ V +S++
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Score = 183 (69.5 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 50/194 (25%), Positives = 91/194 (46%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIE--MECDD 439
T R+ V ++D +++A ++ +++W + ++ KA +L++ E +EC
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA-----ELREHEHVVEC-- 281
Query: 440 ILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYK 499
+ E + + G E K S P LLS S+D TI++W + CL+
Sbjct: 282 --ISWAPESSYSSISEATGSE---TKKSGKPG-PFLLSGSRDKTIKMWDVSTGMCLMTLV 335
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + V + F G + S D+ R+W + ++ H V + FH + YV
Sbjct: 336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 395
Query: 560 ATGSSDRTIRLWDC 573
TGS D+T+++W+C
Sbjct: 396 VTGSVDQTVKVWEC 409
Score = 179 (68.1 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 42/156 (26%), Positives = 72/156 (46%)
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH PV + F P SA D ++W ++ R GH V+ + F + +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLL 165
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXX 619
A+ S+D TI+LWD +R + GH V +++ G + SA D + MW++
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 620 XXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
+ VR + ++DG ++AS D +V++W
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 174 (66.3 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 49/201 (24%), Positives = 90/201 (44%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKL-KAMKS-SDQLQDIEME-- 436
Y L R VT S++ ++ IK+W + +K +D ++DI +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHS 161
Query: 437 ------CD-DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL 489
C D+ +++ D + E RT+ GH+ V ++ P+ ++S S+D TI++W +
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 490 LLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC 549
C+ + GH V ++ + G AS +D+ R+W + H V+C
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 550 VQFHPNSNYV----ATGSSDR 566
+ + P S+Y ATGS +
Sbjct: 282 ISWAPESSYSSISEATGSETK 302
Score = 172 (65.6 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 36/115 (31%), Positives = 56/115 (48%)
Query: 542 GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFL 601
GH S V V FHP + + + S D TI++WD TG R L GH V +SF G+ L
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLL 165
Query: 602 ASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
AS D + +WD V ++ +G+ + S+ +D ++K+W+
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Score = 135 (52.6 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 28/99 (28%), Positives = 47/99 (47%)
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
++ +GS D+TI++WD TG + L GH V + F G+F+ S D + +WD N
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 618 XXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
V +L F + + + D +VK+W+
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 128 (50.1 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 31/104 (29%), Positives = 45/104 (43%)
Query: 582 LTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGN 641
L+GH++PV + F + SA D + +WD D V + F G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGK 163
Query: 642 ILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYL 685
+LAS D ++KLWDF G E + H D SS+A +
Sbjct: 164 LLASCSADMTIKLWDFQ------GFECIRTMHGHDHNVSSVAIM 201
Score = 120 (47.3 bits), Expect = 0.00051, P = 0.00051
Identities = 25/101 (24%), Positives = 47/101 (46%)
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
G + S D+ ++W + L VGH + V V FH ++ + + D+T+R+WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
++ L H+ V +L F ++ + D V +W+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 85 (35.0 bits), Expect = 4.4e-22, Sum P(2) = 4.4e-22
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 598 GRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDF 657
G FL S D + MWD+S + VR + F G + S D ++++WD+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Score = 44 (20.5 bits), Expect = 8.2e-18, Sum P(2) = 8.2e-18
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 638 RDGNILASSGQDCSVKLWD 656
+ G L S +D ++K+WD
Sbjct: 306 KPGPFLLSGSRDKTIKMWD 324
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 239 (89.2 bits), Expect = 6.2e-22, Sum P(3) = 6.2e-22
Identities = 51/158 (32%), Positives = 78/158 (49%)
Query: 456 LVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGY 515
L GH PV ++ F P S+++S S+D TI++W KGH V DI F G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 516 YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT 575
AS D +LW + +R GH +V V PN +++ + + D+TI++W+ T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQT 223
Query: 576 GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMW 613
G V+ TGH+ V + + G +AS D V +W
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 230 (86.0 bits), Expect = 8.6e-21, Sum P(3) = 8.6e-21
Identities = 47/158 (29%), Positives = 80/158 (50%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
+D +++ D + RTL GH V+ +SF LL SCS D TI+LW + C+
Sbjct: 128 EDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT 187
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
GH H V + P+G + SA D+ ++W + + ++ F GH V V+ + +
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFS 595
+A+ S+D+T+R+W T L H+ V +S++
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Score = 183 (69.5 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 50/194 (25%), Positives = 91/194 (46%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIE--MECDD 439
T R+ V ++D +++A ++ +++W + ++ KA +L++ E +EC
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA-----ELREHEHVVEC-- 281
Query: 440 ILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYK 499
+ E + + G E K S P LLS S+D TI++W + CL+
Sbjct: 282 --ISWAPESSYSSISEATGSE---TKKSGKPG-PFLLSGSRDKTIKMWDVSTGMCLMTLV 335
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + V + F G + S D+ R+W + ++ H V + FH + YV
Sbjct: 336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 395
Query: 560 ATGSSDRTIRLWDC 573
TGS D+T+++W+C
Sbjct: 396 VTGSVDQTVKVWEC 409
Score = 177 (67.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 42/156 (26%), Positives = 71/156 (45%)
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH PV + F P SA D ++W ++ R GH V + F + +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXX 619
A+ S+D TI+LWD +R + GH V +++ G + SA D + MW++
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGY 225
Query: 620 XXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
+ VR + ++DG ++AS D +V++W
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 174 (66.3 bits), Expect = 3.4e-19, Sum P(3) = 3.4e-19
Identities = 49/201 (24%), Positives = 90/201 (44%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKL-KAMKS-SDQLQDIEME-- 436
Y L R VT S++ ++ IK+W + +K +D +QDI +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 437 ------CD-DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL 489
C D+ +++ D + E RT+ GH+ V ++ P+ ++S ++D TI++W +
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEV 221
Query: 490 LLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC 549
C+ + GH V ++ + G AS +D+ R+W + H V+C
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 550 VQFHPNSNYV----ATGSSDR 566
+ + P S+Y ATGS +
Sbjct: 282 ISWAPESSYSSISEATGSETK 302
Score = 173 (66.0 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 36/115 (31%), Positives = 56/115 (48%)
Query: 542 GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFL 601
GH S V V FHP + + + S D TI++WD TG R L GH V +SF G+ L
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 602 ASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
AS D + +WD V ++ +G+ + S+ +D ++K+W+
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWE 220
Score = 135 (52.6 bits), Expect = 3.4e-19, Sum P(3) = 3.4e-19
Identities = 28/99 (28%), Positives = 47/99 (47%)
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
++ +GS D+TI++WD TG + L GH V + F G+F+ S D + +WD N
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 618 XXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
V +L F + + + D +VK+W+
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 129 (50.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 31/104 (29%), Positives = 46/104 (44%)
Query: 582 LTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGN 641
L+GH++PV + F + SA D + +WD D V+ + F G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 642 ILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYL 685
+LAS D ++KLWDF G E + H D SS+A +
Sbjct: 164 LLASCSADMTIKLWDFQ------GFECIRTMHGHDHNVSSVAIM 201
Score = 85 (35.0 bits), Expect = 6.2e-22, Sum P(3) = 6.2e-22
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 598 GRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDF 657
G FL S D + MWD+S + VR + F G + S D ++++WD+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Score = 44 (20.5 bits), Expect = 1.0e-17, Sum P(3) = 1.0e-17
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 638 RDGNILASSGQDCSVKLWD 656
+ G L S +D ++K+WD
Sbjct: 306 KPGPFLLSGSRDKTIKMWD 324
Score = 37 (18.1 bits), Expect = 6.2e-22, Sum P(3) = 6.2e-22
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 143 NLYEDAYQDLKKFIENSLDV 162
N YE+AY KK E LD+
Sbjct: 22 NGYEEAYSVFKK--EAELDM 39
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 281 (104.0 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 69/223 (30%), Positives = 111/223 (49%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D V + D + L GH G V L F R+LL+S S D+TI +W R L VY
Sbjct: 240 DRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPLKVY 299
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHP----LRLFVGHYSDVDCVQFHP 554
GH V + S + Y S+ D AR+W D+ P + + GH + V+ VQ+
Sbjct: 300 FGHTDNVLGVVVSEN--YIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSS 357
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+ + T SSDRT+R WD TG +R++ H+ + ++ G+F+ S D + +++
Sbjct: 358 KTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQYN--GKFIVSGSSDLTIRIFE 415
Query: 615 LSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDF 657
S+ D++R + F+ D I+ S G D +V++W+F
Sbjct: 416 ASSGKLLRMLQGHEDLIRTVRFN-DEKIV-SGGYDGTVRIWNF 456
Score = 163 (62.4 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 57/251 (22%), Positives = 105/251 (41%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK-LKA-MKSSDQLQDIEMECD 438
Y L V C + ++L G S+S I +W ++ LK +D + + + +
Sbjct: 255 YKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVVSEN 314
Query: 439 DIL-------VRI--MDERN-AETT-RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLW 487
I+ R+ +D + AE L GH V + +S L+++ S D T+R W
Sbjct: 315 YIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTW 374
Query: 488 SLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDV 547
+ C+ + H + +++ G + S D R++ S LR+ GH +
Sbjct: 375 DITTGHCIRIIHAHQRGIACAQYN--GKFIVSGSSDLTIRIFEASSGKLLRMLQGHEDLI 432
Query: 548 DCVQFHPNSNYVATGSSDRTIRLWDCVTGS-HVRLLTGHKAPVYALSFSVCGRFLASAGG 606
V+F N + +G D T+R+W+ TG H L + V+ L F R + +
Sbjct: 433 RTVRF--NDEKIVSGGYDGTVRIWNFNTGEQHCVLHNSRNSRVFGLQFD--HRRIIACTH 488
Query: 607 DGNVHMWDLSN 617
+ +W+ +
Sbjct: 489 SSEILVWNFDD 499
Score = 157 (60.3 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 44/192 (22%), Positives = 86/192 (44%)
Query: 471 DRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHP--VWDIKFSPHGYYFASAGHDRMARL 528
D +++S S+D T+ +W + R ++YK +GH V + F S D +
Sbjct: 230 DDEIMVSGSKDRTVSVWDVNS-R-FILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIII 287
Query: 529 WATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLW--DCVTGSH--VRLLTG 584
W + PL+++ GH +V V + NY+ + S D T R+W D + + + +L G
Sbjct: 288 WDWQNRRPLKVYFGHTDNVLGVVV--SENYIISSSRDHTARVWRLDATSPAEACMHVLRG 345
Query: 585 HKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILA 644
H A V ++ +S + +A D + WD++ + C +G +
Sbjct: 346 HLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIA--CAQYNGKFIV 403
Query: 645 SSGQDCSVKLWD 656
S D ++++++
Sbjct: 404 SGSSDLTIRIFE 415
Score = 139 (54.0 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 48/207 (23%), Positives = 79/207 (38%)
Query: 480 QDNTIRLWSLLLWRCLVVYKGHGHPV--WDIKFSPHGYYFASAGHDRMARLWATDSYHPL 537
Q N I + + ++ +G P+ W + H + ++ H R L +T + +
Sbjct: 152 QQNIIGPYGTMFLPQQFIFDSNGRPLLNWSYLYKEHAHLDSNWRHGRF--LVSTFNNPSI 209
Query: 538 RL-----FVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYAL 592
R F V CVQ+ + + +GS DRT+ +WD + + L GH V L
Sbjct: 210 RFPADQDFRATLDSVYCVQY--DDEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCL 267
Query: 593 SFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSV 652
F L S D + +WD N D V + S N + SS +D +
Sbjct: 268 DFCRRRNLLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVVSE--NYIISSSRDHTA 325
Query: 653 KLWDFAKLSDEVGTEEVNLSHSADIKN 679
++W S V H A + +
Sbjct: 326 RVWRLDATSPAEACMHVLRGHLASVNS 352
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 275 (101.9 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 63/241 (26%), Positives = 115/241 (47%)
Query: 419 QKLKAMKSSDQLQDIEMECDDILVRIMD--ERNAETTRTLVGHEGPVRKLSFSPDRSLLL 476
QK++ + ++ + + + + + ++ + N + L H P+ ++ + S +
Sbjct: 49 QKVEPLITASRTKQVRLLVQRLQEKLRQHCDHNFYLFKVLRAHILPLTNVALNKAGSCFI 108
Query: 477 SCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFS-PHGYYFASAGHDRMARLWATDSYH 535
+ S D T ++W L +GH + V+ I F+ P+G A+ D+ +LW+ ++
Sbjct: 109 TGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGK 168
Query: 536 PLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFS 595
F GH +++ C+ F+P S VATGS D T +LWD +G V LTGH A + +LSF
Sbjct: 169 CYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFD 228
Query: 596 VCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
G + + D V +WD S + + FS D +++ + D + LW
Sbjct: 229 TSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLW 288
Query: 656 D 656
D
Sbjct: 289 D 289
Score = 269 (99.8 bits), Expect = 9.6e-21, P = 9.6e-21
Identities = 63/246 (25%), Positives = 108/246 (43%)
Query: 380 CY-TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECD 438
CY T ++ C + +++A G ++ KLW + + + + I + D
Sbjct: 169 CYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFD 228
Query: 439 -----------DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLW 487
D V + D TL+GH + FS D SL+L+ S D T LW
Sbjct: 229 TSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLW 288
Query: 488 SLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDV 547
+C+ GH + D F G A+A D AR++ + + GH ++
Sbjct: 289 DATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEI 348
Query: 548 DCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGD 607
+ F+P N + TGSSD+T R+WD TG +++L GH +++ +F+ G + + D
Sbjct: 349 SKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKD 408
Query: 608 GNVHMW 613
+ +W
Sbjct: 409 NSCRIW 414
Score = 249 (92.7 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 55/219 (25%), Positives = 99/219 (45%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFS-PDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
D ++ D + E TL GH V ++F+ P + + S D T +LWS +C
Sbjct: 113 DRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHT 172
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
++GH + + F+P A+ D A+LW S + GH +++ + F + +
Sbjct: 173 FRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGD 232
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
+ TGS D T+ +WD TG V L GH A + + FS + + D +WD ++
Sbjct: 233 RIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATS 292
Query: 618 XXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
D + CF G ++A++ D + ++++
Sbjct: 293 GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYN 331
Score = 241 (89.9 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 52/211 (24%), Positives = 93/211 (44%)
Query: 449 NAETTR---TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPV 505
+AET + T GH + LSF+P +++ + S D T +LW + +V GH +
Sbjct: 163 SAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEI 222
Query: 506 WDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSD 565
+ F G + D +W + + +GH +++ F + + + TGS D
Sbjct: 223 ISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMD 282
Query: 566 RTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXX 625
+T LWD +G V LTGH + F G+ +A+A DG +++ +
Sbjct: 283 KTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLE 342
Query: 626 XXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ + F+ GN L + D + ++WD
Sbjct: 343 GHEGEISKISFNPQGNRLLTGSSDKTARIWD 373
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 275 (101.9 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 64/246 (26%), Positives = 118/246 (47%)
Query: 380 CY-TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVP-QKLKAMKS-SDQLQDIEME 436
CY T ++ C + +++A G ++ KLW + +++ ++ S ++ +
Sbjct: 169 CYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFN 228
Query: 437 C--DDILVRIMDER----NAETTRT---LVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLW 487
D I+ D +A+T R L+GH + SF+ D SL+L+ S D T +LW
Sbjct: 229 TSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLW 288
Query: 488 SLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDV 547
+C+ GH + D F G A+A D AR+++ + + GH ++
Sbjct: 289 DATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEI 348
Query: 548 DCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGD 607
+ F+P N++ TGSSD+T R+WD TG +++L GH +++ +F+ G + + D
Sbjct: 349 SKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKD 408
Query: 608 GNVHMW 613
+W
Sbjct: 409 NTCRIW 414
Score = 263 (97.6 bits), Expect = 5.0e-20, P = 5.0e-20
Identities = 72/322 (22%), Positives = 137/322 (42%)
Query: 348 PLKDSEKIDKLKALREATKRVTLGPESLPSIACYTLLNAR-QQVTCAEISEDVSILAVGF 406
PL + + +++K L + + LG S + + +L A +T +++ S G
Sbjct: 53 PLLTASRTEQVKLLIQRLQE-KLGQNSNHTFYLFKVLKAHILPLTNVALNKSGSCFITGS 111
Query: 407 SESYIKLWSLVP-QKLKAMKSS-DQLQDIEMEC---DDILVRIMDER----NAETTR--- 454
+ KLW ++L ++ + + I D I D+ + ET +
Sbjct: 112 YDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYH 171
Query: 455 TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG 514
T GH + LSF+P +L+ + S D T +LW + + +GH + + F+ G
Sbjct: 172 TFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSG 231
Query: 515 YYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCV 574
+ D +W D+ + + +GH +++ F+ + + + TGS D+T +LWD
Sbjct: 232 DRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDAT 291
Query: 575 TGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRAL 634
G V LTGH + F G+ +A+A DG ++ + + +
Sbjct: 292 NGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKI 351
Query: 635 CFSRDGNILASSGQDCSVKLWD 656
F+ GN L + D + ++WD
Sbjct: 352 SFNPQGNHLLTGSSDKTARIWD 373
Score = 258 (95.9 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 56/221 (25%), Positives = 103/221 (46%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFS-PDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
D ++ D + E TL GH V ++F+ P + + S D T +LWS+ +C
Sbjct: 113 DRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHT 172
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
++GH + + F+P A+ D A+LW + + GH +++ + F+ + +
Sbjct: 173 FRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGD 232
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
+ TGS D T+ +WD TG V +L GH A + + SF+ + + D +WD +N
Sbjct: 233 RIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATN 292
Query: 618 XXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFA 658
D + CF G ++A++ D + +++ A
Sbjct: 293 GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAA 333
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 278 (102.9 bits), Expect = 5.7e-21, P = 5.7e-21
Identities = 68/242 (28%), Positives = 104/242 (42%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
DD V + +L GH P+ L S L+++ SQ +IR+W L + L
Sbjct: 41 DDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRT 100
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
GH + + F P+G + AS D +LW + + H V C++F P+
Sbjct: 101 LLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGK 160
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
++A+ + D T++LWD G + TGH PV + F LAS D + WDL
Sbjct: 161 WLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEK 220
Query: 618 XXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKL--WDFAKLSDEVGTEEVNLSHSA 675
VR + F+ DG L QD S+++ W+ + D V VN A
Sbjct: 221 FHVVSCIEEEATPVRCILFNPDGCCLYGGFQD-SLRVYGWEPERCFDVV---VVNWGKVA 276
Query: 676 DI 677
D+
Sbjct: 277 DL 278
Score = 240 (89.5 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 57/213 (26%), Positives = 93/213 (43%)
Query: 448 RNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNT-IRLWSLLLWRCLVVYKGHGHPVW 506
+ A + +V H V L LL+ D+ + +WS+ C++ GH P+
Sbjct: 8 KTAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIE 67
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
++ S + R+W ++ LR +GH +++ + FHP ++VA+GS D
Sbjct: 68 SLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDT 127
Query: 567 TIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXX 626
I+LWD + H V L FS G++LASA D V +WDL+
Sbjct: 128 DIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTG 187
Query: 627 XXDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659
V + F +LAS D +++ WD K
Sbjct: 188 HSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEK 220
Score = 124 (48.7 bits), Expect = 0.00037, P = 0.00037
Identities = 39/144 (27%), Positives = 60/144 (41%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLV-----------PQKLKAMKSSDQL 430
TLL + + + S +A G ++ IKLW + Q ++ ++ S
Sbjct: 100 TLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDG 159
Query: 431 QDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL 490
+ + DD V++ D + GH GPV + F P LL S S D TIR W L
Sbjct: 160 KWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLE 219
Query: 491 LWRCLVVYKGHGHPVWDIKFSPHG 514
+ + + PV I F+P G
Sbjct: 220 KFHVVSCIEEEATPVRCILFNPDG 243
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 266 (98.7 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 59/192 (30%), Positives = 91/192 (47%)
Query: 456 LVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGY 515
L GH + + F P SL++S S+D TI++W KGH + V DI F G
Sbjct: 102 LTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGN 161
Query: 516 YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT 575
AS D +LW +Y ++ GH +V CV+F P+ + + + S D+TI++W+ T
Sbjct: 162 LLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAAT 221
Query: 576 GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALC 635
G ++ L GH+ V ++ S G +AS D + W++ VV L
Sbjct: 222 GYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLA 281
Query: 636 FSRDGNILASSG 647
FS NI+ G
Sbjct: 282 FST-ANIIDIPG 292
Score = 235 (87.8 bits), Expect = 6.7e-17, Sum P(2) = 6.7e-17
Identities = 48/158 (30%), Positives = 81/158 (51%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
+D +++ D + E RTL GH V+ + F +LL SCS D TI+LW + C+
Sbjct: 126 EDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKT 185
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
GH H V ++F+P G S+ D+ ++W + + ++ VGH V + + +
Sbjct: 186 LHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGS 245
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFS 595
+A+ S+D+TI+ W+ V G + H V L+FS
Sbjct: 246 CIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFS 283
Score = 207 (77.9 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 48/163 (29%), Positives = 75/163 (46%)
Query: 497 VYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNS 556
+ GH + + +KF P SA D ++W +S R GH + V + F
Sbjct: 101 ILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTG 160
Query: 557 NYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLS 616
N +A+ S+D TI+LWD T V+ L GH V + F+ G L S+ D + +W+ +
Sbjct: 161 NLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAA 220
Query: 617 NXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659
D VR + S DG+ +AS D ++K W+ K
Sbjct: 221 TGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVK 263
Score = 170 (64.9 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 54/198 (27%), Positives = 91/198 (45%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDI- 440
TL+ V +SED S +A ++ IK W++V K + + + + + +EC
Sbjct: 227 TLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIV--KGECLATYREHSHV-VECLAFS 283
Query: 441 LVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSC------SQDNTIRLWSLLLWRC 494
I+D + L EG K+ P +L+ C S+D TI++W L RC
Sbjct: 284 TANIIDIPGS----LLSTPEGK-SKVKQGPGGNLVGQCGYLATGSRDKTIKIWELATGRC 338
Query: 495 LVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLF-VGHYSDVDCVQFH 553
L Y GH + V ++F P G + S G D+ R+W ++ H + C+ F
Sbjct: 339 LATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKTINEAHTHFISCLDFC 398
Query: 554 PNSNYVATGSSDRTIRLW 571
++ ++ATG D I++W
Sbjct: 399 LHNPHIATGGVDDVIKVW 416
Score = 155 (59.6 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 32/99 (32%), Positives = 49/99 (49%)
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
Y+ATGS D+TI++W+ TG + GH V A+ F CG+FL S G D + +WD++
Sbjct: 318 YLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQ 377
Query: 618 XX-XXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
+ L F +A+ G D +K+W
Sbjct: 378 GRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVW 416
Score = 138 (53.6 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 27/101 (26%), Positives = 50/101 (49%)
Query: 516 YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT 575
Y A+ D+ ++W + L ++GH + V V+FHP ++ + D+TIR+WD
Sbjct: 318 YLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQ 377
Query: 576 GSHVRLLT-GHKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
G ++ + H + L F + +A+ G D + +W L
Sbjct: 378 GRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVWKL 418
Score = 43 (20.2 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 130 GDLLSAYESEGDPNLYEDAYQDLKKFIENSLDVYK 164
G +L +ES + Y+ ++++ KK LDV K
Sbjct: 13 GSILDYFES----SQYKSSFEEFKKETGTELDVKK 43
>ZFIN|ZDB-GENE-030131-263 [details] [associations]
symbol:prp19 "PRP19/PSO4 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0043518 "negative regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IGI;IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504
ZFIN:ZDB-GENE-030131-263 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG CTD:321544 EMBL:CT990569
EMBL:CABZ01031654 EMBL:BC045954 IPI:IPI00482227 RefSeq:NP_958875.1
UniGene:Dr.150278 STRING:Q7ZV92 Ensembl:ENSDART00000106593
GeneID:321544 KEGG:dre:321544 NextBio:20807418 Uniprot:Q7ZV92
Length = 505
Score = 272 (100.8 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 68/234 (29%), Positives = 105/234 (44%)
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGH 501
V + D R + TL GH V + + P ++++ S S D+TIR+WS+ C+ V + H
Sbjct: 247 VVVFDRREEQIVATLKGHTKKVSSVIYHPAQAVVFSASSDSTIRVWSVTGGNCVQVVRAH 306
Query: 502 GHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSD-----VDCVQFHPNS 556
V + G Y S+ D+ WA R+ + + C QFHP+
Sbjct: 307 ESAVTGLSLHATGDYLLSSSEDQY---WAFSDIQTGRVLTKVTDETAGCALTCAQFHPDG 363
Query: 557 NYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLS 616
TG+ D I++WD ++V GH PV A++FS G +LA+ D ++ +WDL
Sbjct: 364 LIFGTGTGDSQIKIWDLKERTNVANFPGHSGPVTAIAFSENGYYLATGAQDSSLKLWDLR 423
Query: 617 NXXXXXXXXXXXDV-VRALCFSRDGNILASSGQDCSV---KLW-DFAKLSDEVG 665
+ V++L F + G LA G D V K W + SD G
Sbjct: 424 KLKNFKTITLDNNYEVKSLVFDQSGTYLAVGGSDIRVYICKQWSEVLNFSDHSG 477
Score = 192 (72.6 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 78/333 (23%), Positives = 133/333 (39%)
Query: 359 KALREATKRVTLGPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVP 418
+ + TK VT E+L ++ L A Q A S+ ++ A G + + + P
Sbjct: 115 RVIARLTKEVTAAREALATLKPQAGLVAPQ---AAPASQPAAVGAGGEAMEVSEQVGMTP 171
Query: 419 ---QKL--KAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVG-HEGPVR---KLSFS 469
QKL KA + + + + LVR D + G H V L
Sbjct: 172 EIIQKLQDKATVLTTERKKRGKTVPEELVRAEDLSKYRQVGSHAGLHSASVPGILSLDLC 231
Query: 470 P-DRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARL 528
P D + +L+ D + ++ + + KGH V + + P SA D R+
Sbjct: 232 PTDTNKVLTGGADKNVVVFDRREEQIVATLKGHTKKVSSVIYHPAQAVVFSASSDSTIRV 291
Query: 529 WATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKA- 587
W+ + +++ H S V + H +Y+ + S D+ D TG + +T A
Sbjct: 292 WSVTGGNCVQVVRAHESAVTGLSLHATGDYLLSSSEDQYWAFSDIQTGRVLTKVTDETAG 351
Query: 588 -PVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASS 646
+ F G + GD + +WDL V A+ FS +G LA+
Sbjct: 352 CALTCAQFHPDGLIFGTGTGDSQIKIWDLKERTNVANFPGHSGPVTAIAFSENGYYLATG 411
Query: 647 GQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKN 679
QD S+KLWD KL + + + L ++ ++K+
Sbjct: 412 AQDSSLKLWDLRKLKN---FKTITLDNNYEVKS 441
Score = 180 (68.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 55/220 (25%), Positives = 87/220 (39%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCL--V 496
D +R+ + + HE V LS LLS S+D + R L V
Sbjct: 286 DSTIRVWSVTGGNCVQVVRAHESAVTGLSLHATGDYLLSSSEDQYWAFSDIQTGRVLTKV 345
Query: 497 VYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNS 556
+ G + +F P G F + D ++W + F GH V + F N
Sbjct: 346 TDETAGCALTCAQFHPDGLIFGTGTGDSQIKIWDLKERTNVANFPGHSGPVTAIAFSENG 405
Query: 557 NYVATGSSDRTIRLWDCVTGSHVRLLT-GHKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
Y+ATG+ D +++LWD + + +T + V +L F G +LA G D V++
Sbjct: 406 YYLATGAQDSSLKLWDLRKLKNFKTITLDNNYEVKSLVFDQSGTYLAVGGSDIRVYI--C 463
Query: 616 SNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
+V + F LAS+G D S+K +
Sbjct: 464 KQWSEVLNFSDHSGLVTGVAFGEHAQFLASTGMDRSLKFY 503
Score = 168 (64.2 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 43/149 (28%), Positives = 71/149 (47%)
Query: 468 FSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMAR 527
F PD + + + D+ I++W L + + GH PV I FS +GYY A+ D +
Sbjct: 359 FHPDGLIFGTGTGDSQIKIWDLKERTNVANFPGHSGPVTAIAFSENGYYLATGAQDSSLK 418
Query: 528 LWATDSYHPLR-LFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHK 586
LW + + + + +V + F + Y+A G SD IR++ C S V + H
Sbjct: 419 LWDLRKLKNFKTITLDNNYEVKSLVFDQSGTYLAVGGSD--IRVYICKQWSEVLNFSDHS 476
Query: 587 APVYALSFSVCGRFLASAGGDGNVHMWDL 615
V ++F +FLAS G D ++ + L
Sbjct: 477 GLVTGVAFGEHAQFLASTGMDRSLKFYSL 505
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 272 (100.8 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 65/208 (31%), Positives = 101/208 (48%)
Query: 456 LVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGY 515
L GH V + FSPD S++ S D +++W+ + + ++GH + I +SP G
Sbjct: 172 LRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGA 231
Query: 516 YFASAGHDRMARLW--ATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
AS D+ RLW T HP F+GH++ V + F P N + +GS D + LWD
Sbjct: 232 TIASGSDDKTIRLWNVLTGKAHPTP-FIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDV 290
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDV-VR 632
+ ++ L H PV + G +AS DG V +WD S + V
Sbjct: 291 RSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLVHEDNPPVS 350
Query: 633 ALCFSRDGN-ILASSGQDCSVKLWDFAK 659
++ FS +G +LA + DC V+LWD+ +
Sbjct: 351 SVKFSPNGKYVLAWTLDDC-VRLWDYVE 377
Score = 260 (96.6 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 85/313 (27%), Positives = 131/313 (41%)
Query: 372 PESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKL---------- 421
PES+ + L + V+ S D S++A G ++ +K+W+ KL
Sbjct: 161 PESVNYRQKFLLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAG 220
Query: 422 -KAMKSSDQLQDIEMECDDILVRIMDERNAETTRT-LVGHEGPVRKLSFSPDRSLLLSCS 479
+ S I DD +R+ + + T +GH V ++FSP ++L+S S
Sbjct: 221 ISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGS 280
Query: 480 QDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRL 539
D + LW + R + H PV I G AS D + R+W T + LR
Sbjct: 281 YDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRT 340
Query: 540 FVGHYSD--VDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALS--FS 595
V H + V V+F PN YV + D +RLWD V G ++ GH Y+LS F
Sbjct: 341 LV-HEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSGAFG 399
Query: 596 VCGR----------FLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRAL--CFSRDGNIL 643
V G+ F S DG + WD+ VV + C + +G +
Sbjct: 400 VYGQSIPGRTPGYAFAVSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGVDTCSTGEGRFM 459
Query: 644 ASSGQDCSVKLWD 656
S G D +V++W+
Sbjct: 460 VSCGLDGTVRVWE 472
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 250 (93.1 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 65/216 (30%), Positives = 96/216 (44%)
Query: 447 ERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVW 506
E N +R L GH G + F D ++ S S D T LW + + + GH V
Sbjct: 130 EGNVRVSRELAGHTGYLSCCRFLDDNQIVTS-SGDTTCALWDIETGQQTTTFTGHTGDVM 188
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
+ +P F S D A+LW + F GH SD++ + F PN N ATGS D
Sbjct: 189 SLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDA 248
Query: 567 TIRLWDC------VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXX 620
T RL+D +T SH ++ G + ++SFS GR L + D N ++WD
Sbjct: 249 TCRLFDLRADQELMTYSHDNIICG----ITSVSFSKSGRLLLAGYDDFNCNVWDALKADR 304
Query: 621 XXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ V L + DG +A+ D +K+W+
Sbjct: 305 AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 234 (87.4 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 67/251 (26%), Positives = 105/251 (41%)
Query: 422 KAMKSSDQLQDIEMECDDI-LVRIMDERNA------ETTRTLVGHEGPVRKLSFSPDRSL 474
+A + +Q++D C D L +I + + T RTL GH + + + D L
Sbjct: 10 EAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRL 69
Query: 475 LLSCSQDNTIRLWSLLLWRCLVVYKGHGHPV---WDIK--FSPHGYYFASAGHDRMARLW 529
L+S SQD L++W K H P+ W + ++P G Y A G D + ++
Sbjct: 70 LVSASQDG-----KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124
Query: 530 ----ATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH 585
+ R GH + C +F + N + T S D T LWD TG TGH
Sbjct: 125 NLKTREGNVRVSRELAGHTGYLSCCRFL-DDNQIVTSSGDTTCALWDIETGQQTTTFTGH 183
Query: 586 KAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILAS 645
V +LS + R S D + +WD+ + A+CF +GN A+
Sbjct: 184 TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFAT 243
Query: 646 SGQDCSVKLWD 656
D + +L+D
Sbjct: 244 GSDDATCRLFD 254
Score = 178 (67.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 47/180 (26%), Positives = 74/180 (41%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D + D + T T GH G V LS +PD L +S + D + +LW + C +
Sbjct: 163 DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF 222
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC----VQFHP 554
GH + I F P+G FA+ D RL+ D L + ++ C V F
Sbjct: 223 TGHESDINAICFFPNGNAFATGSDDATCRLF--DLRADQELMTYSHDNIICGITSVSFSK 280
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+ + G D +WD + +L GH V L + G +A+ D + +W+
Sbjct: 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 154 (59.3 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 40/168 (23%), Positives = 70/168 (41%)
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + +F S+G D LW ++ F GH DV + P++
Sbjct: 141 GHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLF 199
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXX 619
+G+ D + +LWD G + TGH++ + A+ F G A+ D ++DL
Sbjct: 200 VSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ 259
Query: 620 XXXXXXXXXDV--VRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVG 665
+ + ++ FS+ G +L + D + +WD K +D G
Sbjct: 260 ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK-ADRAG 306
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 250 (93.1 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 65/216 (30%), Positives = 96/216 (44%)
Query: 447 ERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVW 506
E N +R L GH G + F D ++ S S D T LW + + + GH V
Sbjct: 130 EGNVRVSRELAGHTGYLSCCRFLDDNQIVTS-SGDTTCALWDIETGQQTTTFTGHTGDVM 188
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
+ +P F S D A+LW + F GH SD++ + F PN N ATGS D
Sbjct: 189 SLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDA 248
Query: 567 TIRLWDC------VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXX 620
T RL+D +T SH ++ G + ++SFS GR L + D N ++WD
Sbjct: 249 TCRLFDLRADQELMTYSHDNIICG----ITSVSFSKSGRLLLAGYDDFNCNVWDALKADR 304
Query: 621 XXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ V L + DG +A+ D +K+W+
Sbjct: 305 AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 234 (87.4 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 67/251 (26%), Positives = 105/251 (41%)
Query: 422 KAMKSSDQLQDIEMECDDI-LVRIMDERNA------ETTRTLVGHEGPVRKLSFSPDRSL 474
+A + +Q++D C D L +I + + T RTL GH + + + D L
Sbjct: 10 EAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRL 69
Query: 475 LLSCSQDNTIRLWSLLLWRCLVVYKGHGHPV---WDIK--FSPHGYYFASAGHDRMARLW 529
L+S SQD L++W K H P+ W + ++P G Y A G D + ++
Sbjct: 70 LVSASQDG-----KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124
Query: 530 ----ATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH 585
+ R GH + C +F + N + T S D T LWD TG TGH
Sbjct: 125 NLKTREGNVRVSRELAGHTGYLSCCRFL-DDNQIVTSSGDTTCALWDIETGQQTTTFTGH 183
Query: 586 KAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILAS 645
V +LS + R S D + +WD+ + A+CF +GN A+
Sbjct: 184 TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFAT 243
Query: 646 SGQDCSVKLWD 656
D + +L+D
Sbjct: 244 GSDDATCRLFD 254
Score = 178 (67.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 47/180 (26%), Positives = 74/180 (41%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D + D + T T GH G V LS +PD L +S + D + +LW + C +
Sbjct: 163 DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF 222
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC----VQFHP 554
GH + I F P+G FA+ D RL+ D L + ++ C V F
Sbjct: 223 TGHESDINAICFFPNGNAFATGSDDATCRLF--DLRADQELMTYSHDNIICGITSVSFSK 280
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+ + G D +WD + +L GH V L + G +A+ D + +W+
Sbjct: 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 154 (59.3 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 40/168 (23%), Positives = 70/168 (41%)
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + +F S+G D LW ++ F GH DV + P++
Sbjct: 141 GHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLF 199
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXX 619
+G+ D + +LWD G + TGH++ + A+ F G A+ D ++DL
Sbjct: 200 VSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ 259
Query: 620 XXXXXXXXXDV--VRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVG 665
+ + ++ FS+ G +L + D + +WD K +D G
Sbjct: 260 ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK-ADRAG 306
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 250 (93.1 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 65/216 (30%), Positives = 96/216 (44%)
Query: 447 ERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVW 506
E N +R L GH G + F D ++ S S D T LW + + + GH V
Sbjct: 130 EGNVRVSRELAGHTGYLSCCRFLDDNQIVTS-SGDTTCALWDIETGQQTTTFTGHTGDVM 188
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
+ +P F S D A+LW + F GH SD++ + F PN N ATGS D
Sbjct: 189 SLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDA 248
Query: 567 TIRLWDC------VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXX 620
T RL+D +T SH ++ G + ++SFS GR L + D N ++WD
Sbjct: 249 TCRLFDLRADQELMTYSHDNIICG----ITSVSFSKSGRLLLAGYDDFNCNVWDALKADR 304
Query: 621 XXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ V L + DG +A+ D +K+W+
Sbjct: 305 AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 234 (87.4 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 67/251 (26%), Positives = 105/251 (41%)
Query: 422 KAMKSSDQLQDIEMECDDI-LVRIMDERNA------ETTRTLVGHEGPVRKLSFSPDRSL 474
+A + +Q++D C D L +I + + T RTL GH + + + D L
Sbjct: 10 EAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRL 69
Query: 475 LLSCSQDNTIRLWSLLLWRCLVVYKGHGHPV---WDIK--FSPHGYYFASAGHDRMARLW 529
L+S SQD L++W K H P+ W + ++P G Y A G D + ++
Sbjct: 70 LVSASQDG-----KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124
Query: 530 ----ATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH 585
+ R GH + C +F + N + T S D T LWD TG TGH
Sbjct: 125 NLKTREGNVRVSRELAGHTGYLSCCRFL-DDNQIVTSSGDTTCALWDIETGQQTTTFTGH 183
Query: 586 KAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILAS 645
V +LS + R S D + +WD+ + A+CF +GN A+
Sbjct: 184 TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFAT 243
Query: 646 SGQDCSVKLWD 656
D + +L+D
Sbjct: 244 GSDDATCRLFD 254
Score = 178 (67.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 47/180 (26%), Positives = 74/180 (41%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D + D + T T GH G V LS +PD L +S + D + +LW + C +
Sbjct: 163 DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF 222
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC----VQFHP 554
GH + I F P+G FA+ D RL+ D L + ++ C V F
Sbjct: 223 TGHESDINAICFFPNGNAFATGSDDATCRLF--DLRADQELMTYSHDNIICGITSVSFSK 280
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+ + G D +WD + +L GH V L + G +A+ D + +W+
Sbjct: 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 154 (59.3 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 40/168 (23%), Positives = 70/168 (41%)
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + +F S+G D LW ++ F GH DV + P++
Sbjct: 141 GHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLF 199
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXX 619
+G+ D + +LWD G + TGH++ + A+ F G A+ D ++DL
Sbjct: 200 VSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ 259
Query: 620 XXXXXXXXXDV--VRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVG 665
+ + ++ FS+ G +L + D + +WD K +D G
Sbjct: 260 ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK-ADRAG 306
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 250 (93.1 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 65/216 (30%), Positives = 96/216 (44%)
Query: 447 ERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVW 506
E N +R L GH G + F D ++ S S D T LW + + + GH V
Sbjct: 130 EGNVRVSRELAGHTGYLSCCRFLDDNQIVTS-SGDTTCALWDIETGQQTTTFTGHTGDVM 188
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
+ +P F S D A+LW + F GH SD++ + F PN N ATGS D
Sbjct: 189 SLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDA 248
Query: 567 TIRLWDC------VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXX 620
T RL+D +T SH ++ G + ++SFS GR L + D N ++WD
Sbjct: 249 TCRLFDLRADQELMTYSHDNIICG----ITSVSFSKSGRLLLAGYDDFNCNVWDALKADR 304
Query: 621 XXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ V L + DG +A+ D +K+W+
Sbjct: 305 AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 234 (87.4 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 67/251 (26%), Positives = 105/251 (41%)
Query: 422 KAMKSSDQLQDIEMECDDI-LVRIMDERNA------ETTRTLVGHEGPVRKLSFSPDRSL 474
+A + +Q++D C D L +I + + T RTL GH + + + D L
Sbjct: 10 EAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRL 69
Query: 475 LLSCSQDNTIRLWSLLLWRCLVVYKGHGHPV---WDIK--FSPHGYYFASAGHDRMARLW 529
L+S SQD L++W K H P+ W + ++P G Y A G D + ++
Sbjct: 70 LVSASQDG-----KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124
Query: 530 ----ATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH 585
+ R GH + C +F + N + T S D T LWD TG TGH
Sbjct: 125 NLKTREGNVRVSRELAGHTGYLSCCRFL-DDNQIVTSSGDTTCALWDIETGQQTTTFTGH 183
Query: 586 KAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILAS 645
V +LS + R S D + +WD+ + A+CF +GN A+
Sbjct: 184 TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFAT 243
Query: 646 SGQDCSVKLWD 656
D + +L+D
Sbjct: 244 GSDDATCRLFD 254
Score = 178 (67.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 47/180 (26%), Positives = 74/180 (41%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D + D + T T GH G V LS +PD L +S + D + +LW + C +
Sbjct: 163 DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF 222
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC----VQFHP 554
GH + I F P+G FA+ D RL+ D L + ++ C V F
Sbjct: 223 TGHESDINAICFFPNGNAFATGSDDATCRLF--DLRADQELMTYSHDNIICGITSVSFSK 280
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+ + G D +WD + +L GH V L + G +A+ D + +W+
Sbjct: 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 154 (59.3 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 40/168 (23%), Positives = 70/168 (41%)
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + +F S+G D LW ++ F GH DV + P++
Sbjct: 141 GHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLF 199
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXX 619
+G+ D + +LWD G + TGH++ + A+ F G A+ D ++DL
Sbjct: 200 VSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ 259
Query: 620 XXXXXXXXXDV--VRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVG 665
+ + ++ FS+ G +L + D + +WD K +D G
Sbjct: 260 ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK-ADRAG 306
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 250 (93.1 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 65/216 (30%), Positives = 96/216 (44%)
Query: 447 ERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVW 506
E N +R L GH G + F D ++ S S D T LW + + + GH V
Sbjct: 130 EGNVRVSRELAGHTGYLSCCRFLDDNQIVTS-SGDTTCALWDIETGQQTTTFTGHTGDVM 188
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
+ +P F S D A+LW + F GH SD++ + F PN N ATGS D
Sbjct: 189 SLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDA 248
Query: 567 TIRLWDC------VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXX 620
T RL+D +T SH ++ G + ++SFS GR L + D N ++WD
Sbjct: 249 TCRLFDLRADQELMTYSHDNIICG----ITSVSFSKSGRLLLAGYDDFNCNVWDALKADR 304
Query: 621 XXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ V L + DG +A+ D +K+W+
Sbjct: 305 AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 234 (87.4 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 67/251 (26%), Positives = 105/251 (41%)
Query: 422 KAMKSSDQLQDIEMECDDI-LVRIMDERNA------ETTRTLVGHEGPVRKLSFSPDRSL 474
+A + +Q++D C D L +I + + T RTL GH + + + D L
Sbjct: 10 EAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRL 69
Query: 475 LLSCSQDNTIRLWSLLLWRCLVVYKGHGHPV---WDIK--FSPHGYYFASAGHDRMARLW 529
L+S SQD L++W K H P+ W + ++P G Y A G D + ++
Sbjct: 70 LVSASQDG-----KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124
Query: 530 ----ATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH 585
+ R GH + C +F + N + T S D T LWD TG TGH
Sbjct: 125 NLKTREGNVRVSRELAGHTGYLSCCRFL-DDNQIVTSSGDTTCALWDIETGQQTTTFTGH 183
Query: 586 KAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILAS 645
V +LS + R S D + +WD+ + A+CF +GN A+
Sbjct: 184 TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFAT 243
Query: 646 SGQDCSVKLWD 656
D + +L+D
Sbjct: 244 GSDDATCRLFD 254
Score = 178 (67.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 47/180 (26%), Positives = 74/180 (41%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D + D + T T GH G V LS +PD L +S + D + +LW + C +
Sbjct: 163 DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF 222
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC----VQFHP 554
GH + I F P+G FA+ D RL+ D L + ++ C V F
Sbjct: 223 TGHESDINAICFFPNGNAFATGSDDATCRLF--DLRADQELMTYSHDNIICGITSVSFSK 280
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+ + G D +WD + +L GH V L + G +A+ D + +W+
Sbjct: 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 154 (59.3 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 40/168 (23%), Positives = 70/168 (41%)
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + +F S+G D LW ++ F GH DV + P++
Sbjct: 141 GHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLF 199
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXX 619
+G+ D + +LWD G + TGH++ + A+ F G A+ D ++DL
Sbjct: 200 VSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ 259
Query: 620 XXXXXXXXXDV--VRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVG 665
+ + ++ FS+ G +L + D + +WD K +D G
Sbjct: 260 ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK-ADRAG 306
>UNIPROTKB|B3KVK2 [details] [associations]
symbol:GNB1 "cDNA FLJ16663 fis, clone THYMU2005759, highly
similar to Guanine nucleotide-binding proteinG(I)/G(S)/G(T) subunit
beta 1" species:9606 "Homo sapiens" [GO:0001917 "photoreceptor
inner segment" evidence=IEA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IEA] [GO:0007200 "phospholipase C-activating
G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007204 "elevation of cytosolic calcium ion concentration"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010659 "cardiac muscle cell apoptotic process" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0042622 "photoreceptor
outer segment membrane" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 GO:GO:0001750
EMBL:AL109917 EMBL:AL031282 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 UniGene:Hs.430425 HGNC:HGNC:4396 ChiTaRS:GNB1
EMBL:AK122949 IPI:IPI00642117 ProteinModelPortal:B3KVK2 SMR:B3KVK2
STRING:B3KVK2 PRIDE:B3KVK2 Ensembl:ENST00000455156
OrthoDB:EOG4GHZR3 ArrayExpress:B3KVK2 Bgee:B3KVK2 Uniprot:B3KVK2
Length = 240
Score = 250 (93.1 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 65/216 (30%), Positives = 96/216 (44%)
Query: 447 ERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVW 506
E N +R L GH G + F D ++ S S D T LW + + + GH V
Sbjct: 30 EGNVRVSRELAGHTGYLSCCRFLDDNQIVTS-SGDTTCALWDIETGQQTTTFTGHTGDVM 88
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
+ +P F S D A+LW + F GH SD++ + F PN N ATGS D
Sbjct: 89 SLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDA 148
Query: 567 TIRLWDC------VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXX 620
T RL+D +T SH ++ G + ++SFS GR L + D N ++WD
Sbjct: 149 TCRLFDLRADQELMTYSHDNIICG----ITSVSFSKSGRLLLAGYDDFNCNVWDALKADR 204
Query: 621 XXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ V L + DG +A+ D +K+W+
Sbjct: 205 AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 240
Score = 179 (68.1 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 41/151 (27%), Positives = 63/151 (41%)
Query: 510 FSPHGYYFASAGHDRMARLW----ATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSD 565
++P G Y A G D + ++ + R GH + C +F + N + T S D
Sbjct: 5 YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFL-DDNQIVTSSGD 63
Query: 566 RTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXX 625
T LWD TG TGH V +LS + R S D + +WD+
Sbjct: 64 TTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT 123
Query: 626 XXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ A+CF +GN A+ D + +L+D
Sbjct: 124 GHESDINAICFFPNGNAFATGSDDATCRLFD 154
Score = 178 (67.7 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 47/180 (26%), Positives = 74/180 (41%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D + D + T T GH G V LS +PD L +S + D + +LW + C +
Sbjct: 63 DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF 122
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC----VQFHP 554
GH + I F P+G FA+ D RL+ D L + ++ C V F
Sbjct: 123 TGHESDINAICFFPNGNAFATGSDDATCRLF--DLRADQELMTYSHDNIICGITSVSFSK 180
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+ + G D +WD + +L GH V L + G +A+ D + +W+
Sbjct: 181 SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 240
Score = 154 (59.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 40/168 (23%), Positives = 70/168 (41%)
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + +F S+G D LW ++ F GH DV + P++
Sbjct: 41 GHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLF 99
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXX 619
+G+ D + +LWD G + TGH++ + A+ F G A+ D ++DL
Sbjct: 100 VSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ 159
Query: 620 XXXXXXXXXDV--VRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVG 665
+ + ++ FS+ G +L + D + +WD K +D G
Sbjct: 160 ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK-ADRAG 206
>UNIPROTKB|Q5ZMA2 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9031
"Gallus gallus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 GO:GO:0005737 GO:GO:0005654
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339 HOVERGEN:HBG053697
EMBL:AJ719482 IPI:IPI00598799 RefSeq:NP_001034420.1
UniGene:Gga.8361 ProteinModelPortal:Q5ZMA2 STRING:Q5ZMA2
PRIDE:Q5ZMA2 GeneID:430767 KEGG:gga:430767 NextBio:20830569
Uniprot:Q5ZMA2
Length = 505
Score = 268 (99.4 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 72/245 (29%), Positives = 110/245 (44%)
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGH 501
V + D+ + + TL GH V + F P + L+ S S D TIR+WS+ C+ V + H
Sbjct: 247 VIVFDKSSEQILATLKGHSKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRAH 306
Query: 502 GHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLF--VGHYSD---VDCVQFHPNS 556
V + G Y S+ D+ WA R+ V S + C QFHP+
Sbjct: 307 EGSVTGLSLHATGDYLLSSSDDQY---WAFSDIQTGRVLTKVTDESSGCALTCAQFHPDG 363
Query: 557 NYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLS 616
TG+ D I++WD ++V GH P+ +++FS G +LA+A D +V +WDL
Sbjct: 364 LIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLR 423
Query: 617 NXXXXXXXXXXXDV-VRALCFSRDGNILASSGQDCSV---KLW-DFAKLSDEVG-TEEVN 670
+ V++L F + G LA G D + K W + ++ G T V
Sbjct: 424 KLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLTTGVA 483
Query: 671 LSHSA 675
H A
Sbjct: 484 FGHHA 488
Score = 182 (69.1 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 57/229 (24%), Positives = 89/229 (38%)
Query: 431 QDIEMECD-DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL 489
QD+ D +RI NA + + HEG V LS LLS S D +
Sbjct: 277 QDLVFSASPDATIRIWSVPNASCVQVVRAHEGSVTGLSLHATGDYLLSSSDDQYWAFSDI 336
Query: 490 LLWRCL--VVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDV 547
R L V + G + +F P G F + D ++W + F GH +
Sbjct: 337 QTGRVLTKVTDESSGCALTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPI 396
Query: 548 DCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLT-GHKAPVYALSFSVCGRFLASAGG 606
+ F N Y+AT + D +++LWD + + L + V +L F G +LA G
Sbjct: 397 TSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGT 456
Query: 607 DGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
D V ++ + + F +AS+G D S+K +
Sbjct: 457 D--VQIYICKQWTEILHFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFY 503
Score = 174 (66.3 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 49/217 (22%), Positives = 89/217 (41%)
Query: 466 LSFSP-DRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDR 524
L P D + +L+ D + ++ + L KGH V + F P SA D
Sbjct: 228 LDLCPSDTNKILTGGADKNVIVFDKSSEQILATLKGHSKKVTSVVFHPSQDLVFSASPDA 287
Query: 525 MARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTG 584
R+W+ + +++ H V + H +Y+ + S D+ D TG + +T
Sbjct: 288 TIRIWSVPNASCVQVVRAHEGSVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTD 347
Query: 585 HKA--PVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNI 642
+ + F G + D + +WDL + ++ FS +G
Sbjct: 348 ESSGCALTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYY 407
Query: 643 LASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKN 679
LA++ D SVKLWD KL + + + L ++ ++K+
Sbjct: 408 LATAADDSSVKLWDLRKLKN---FKTLQLDNNFEVKS 441
Score = 164 (62.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 61/267 (22%), Positives = 119/267 (44%)
Query: 364 ATKRVTLGPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK--L 421
A K V + +S I TL ++VT ++ ++ I++WS VP +
Sbjct: 243 ADKNVIVFDKSSEQILA-TLKGHSKKVTSVVFHPSQDLVFSASPDATIRIWS-VPNASCV 300
Query: 422 KAMKSSD-QLQDIEMECD-DILVRIMDER-----NAETTRTL--VGHEGPVRKLS---FS 469
+ +++ + + + + D L+ D++ + +T R L V E L+ F
Sbjct: 301 QVVRAHEGSVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDESSGCALTCAQFH 360
Query: 470 PDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLW 529
PD + + + D+ I++W L + + GH P+ I FS +GYY A+A D +LW
Sbjct: 361 PDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLW 420
Query: 530 ATDSYHPLR-LFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAP 588
+ L + + +V + F + Y+A G +D ++++ C + + T H
Sbjct: 421 DLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTD--VQIYICKQWTEILHFTEHSGL 478
Query: 589 VYALSFSVCGRFLASAGGDGNVHMWDL 615
++F +F+AS G D ++ + L
Sbjct: 479 TTGVAFGHHAKFIASTGMDRSLKFYSL 505
Score = 150 (57.9 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 47/174 (27%), Positives = 69/174 (39%)
Query: 519 SAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH 578
+ G D+ ++ S L GH V V FHP+ + V + S D TIR+W S
Sbjct: 240 TGGADKNVIVFDKSSEQILATLKGHSKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASC 299
Query: 579 VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALC--F 636
V+++ H+ V LS G +L S+ D D+ C F
Sbjct: 300 VQVVRAHEGSVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDESSGCALTCAQF 359
Query: 637 SRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNL-SHSADIKNSSLAYLVRSY 689
DG I + D +K+WD L + T N HS I +S+A+ Y
Sbjct: 360 HPDGLIFGTGTMDSQIKIWD---LKER--TNVANFPGHSGPI--TSIAFSENGY 406
>UNIPROTKB|Q0VCN2 [details] [associations]
symbol:MORG1 "Mitogen-activated protein kinase organizer 1"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016301 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:DAAA02019387 EMBL:DAAA02019388 EMBL:BC120088 IPI:IPI00687810
RefSeq:NP_001073118.1 UniGene:Bt.64656 Ensembl:ENSBTAT00000008196
GeneID:780845 KEGG:bta:780845 InParanoid:Q0VCN2 NextBio:20924512
Uniprot:Q0VCN2
Length = 315
Score = 248 (92.4 bits), Expect = 3.6e-20, P = 3.6e-20
Identities = 64/203 (31%), Positives = 92/203 (45%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
+TL +G VR + F+ D + L+C D T++LW+ L L Y GHG+ V D S
Sbjct: 19 KTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFD 78
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
S G D+ LW S +R F GH V+ VQF+ + + +GS D TIR WDC
Sbjct: 79 NSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSTIRCWDC 138
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRA 633
+ + T +A S V + + DG V +DL +
Sbjct: 139 RSRKPEPVQTLDEARDGISSVKVSDHEVLAGSVDGRVRRYDLR--MGQLFSDYVGSPITC 196
Query: 634 LCFSRDGNILASSGQDCSVKLWD 656
+CFSRDG S D +++L D
Sbjct: 197 ICFSRDGQCTLVSSLDSTLRLLD 219
Score = 150 (57.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 74/301 (24%), Positives = 114/301 (37%)
Query: 371 GPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQL 430
GPE LP TL + V + D + S+ +KLW+ + L S
Sbjct: 10 GPE-LPQKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGY 68
Query: 431 QDIEME--------CD---DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCS 479
+ ++ C D V + D + + R GH G V + F+ + +++LS S
Sbjct: 69 EVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGS 128
Query: 480 QDNTIRLWSLLLWRCLVVYK-GHGHP-VWDIKFSPHGYYFASAGHDRMARLWATDSYHPL 537
D+TIR W + V + +K S H S D R +
Sbjct: 129 IDSTIRCWDCRSRKPEPVQTLDEARDGISSVKVSDHEVLAGSV--DGRVRRYDLRMGQLF 186
Query: 538 RLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVC 597
+VG S + C+ F + S D T+RL D TG + TGHK Y L +
Sbjct: 187 SDYVG--SPITCICFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNKEYKLDCCLS 244
Query: 598 GR--FLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFS-RDGNILASSGQDCSVKL 654
R + S DG V WDL VV++L + + +L + G S++
Sbjct: 245 ERDTHVVSCSEDGKVFFWDLVEGALALALPVGPGVVQSLTYHPTEPCLLTAMGG--SIQC 302
Query: 655 W 655
W
Sbjct: 303 W 303
>UNIPROTKB|B2CCY7 [details] [associations]
symbol:PRPF19 "Nuclear matrix protein 200" species:9823
"Sus scrofa" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0008610 "lipid biosynthetic
process" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000974 "Prp19 complex" evidence=IEA] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR000772 PROSITE:PS50231 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:CU861565
EMBL:EU417752 EMBL:AB282747 RefSeq:NP_001121929.1 UniGene:Ssc.44045
STRING:B2CCY7 Ensembl:ENSSSCT00000014327 GeneID:100144769
KEGG:ssc:100144769 Uniprot:B2CCY7
Length = 504
Score = 267 (99.0 bits), Expect = 4.5e-20, P = 4.5e-20
Identities = 70/245 (28%), Positives = 108/245 (44%)
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGH 501
V + D+ + + TL GH V + F P + L+ S S D TIR+WS+ C+ V + H
Sbjct: 246 VVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQVVRAH 305
Query: 502 GHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVD-----CVQFHPNS 556
V + G Y S+ D+ WA R+ + C QFHP+
Sbjct: 306 ESAVTGLSLHATGDYLLSSSDDQY---WAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDG 362
Query: 557 NYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLS 616
TG+ D I++WD ++V GH P+ +++FS G +LA+A D +V +WDL
Sbjct: 363 LIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLR 422
Query: 617 NXXXXXXXXXXXDV-VRALCFSRDGNILASSGQDCSV---KLW-DFAKLSDEVG-TEEVN 670
+ V++L F + G LA G D + K W + ++ G T V
Sbjct: 423 KLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGVTTGVA 482
Query: 671 LSHSA 675
H A
Sbjct: 483 FGHHA 487
Score = 182 (69.1 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 68/306 (22%), Positives = 115/306 (37%)
Query: 354 KIDKLKALREATKRVTLGPESLPSIACYTLLNA-RQQVTCAEISEDVSILAVGFSESYIK 412
K ++L R+ V L S+P I L + ++ ++V + SE +
Sbjct: 200 KPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKS-SEQILA 258
Query: 413 LWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDR 472
+K+ ++ + + D +RI NA + + HE V LS
Sbjct: 259 TLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATG 318
Query: 473 SLLLSCSQDNTIRLWSLLLWRCL--VVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWA 530
LLS S D + R L V + G + +F P G F + D ++W
Sbjct: 319 DYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWD 378
Query: 531 TDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLT-GHKAPV 589
+ F GH + + F N Y+AT + D +++LWD + + L + V
Sbjct: 379 LKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEV 438
Query: 590 YALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQD 649
+L F G +LA G D V ++ V + F +AS+G D
Sbjct: 439 KSLIFDQSGTYLALGGTD--VQIYICKQWTEILHFTEHSGVTTGVAFGHHAKFIASTGMD 496
Query: 650 CSVKLW 655
S+K +
Sbjct: 497 RSLKFY 502
Score = 181 (68.8 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 70/333 (21%), Positives = 130/333 (39%)
Query: 359 KALREATKRVTLGPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVP 418
+ + TK VT E+L ++ L Q V S S++ G +L + P
Sbjct: 115 RVIARLTKEVTAAREALATLKPQAGLIVPQAVP----SSQPSVVGAGEPMDLGELVGMTP 170
Query: 419 QKLKAMKSSDQLQDIEMECDDILV--RIMDERNAETTRTLVGHEG------P-VRKLSFS 469
+ ++ ++ + E + V ++ R + H G P + L
Sbjct: 171 EIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLC 230
Query: 470 P-DRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARL 528
P D + +L+ D + ++ + L KGH V + F P SA D R+
Sbjct: 231 PSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRI 290
Query: 529 WATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKA- 587
W+ + +++ H S V + H +Y+ + S D+ D TG + +T +
Sbjct: 291 WSVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSG 350
Query: 588 -PVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASS 646
+ F G + D + +WDL + ++ FS +G LA++
Sbjct: 351 CSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATA 410
Query: 647 GQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKN 679
D SVKLWD KL + + + L ++ ++K+
Sbjct: 411 ADDSSVKLWDLRKLKN---FKTLQLDNNFEVKS 440
Score = 165 (63.1 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 61/267 (22%), Positives = 119/267 (44%)
Query: 364 ATKRVTLGPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK--L 421
A K V + +S I TL ++VT ++ ++ I++WS VP +
Sbjct: 242 ADKNVVVFDKSSEQILA-TLKGHTKKVTSVVFHPSQELVFSASPDATIRIWS-VPNASCV 299
Query: 422 KAMKSSDQ-LQDIEMECD-DILVRIMDER-----NAETTRTL--VGHEGPVRKLS---FS 469
+ +++ + + + + D L+ D++ + +T R L V E L+ F
Sbjct: 300 QVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFH 359
Query: 470 PDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLW 529
PD + + + D+ I++W L + + GH P+ I FS +GYY A+A D +LW
Sbjct: 360 PDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLW 419
Query: 530 ATDSYHPLR-LFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAP 588
+ L + + +V + F + Y+A G +D ++++ C + + T H
Sbjct: 420 DLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTD--VQIYICKQWTEILHFTEHSGV 477
Query: 589 VYALSFSVCGRFLASAGGDGNVHMWDL 615
++F +F+AS G D ++ + L
Sbjct: 478 TTGVAFGHHAKFIASTGMDRSLKFYSL 504
Score = 150 (57.9 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 47/174 (27%), Positives = 69/174 (39%)
Query: 519 SAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH 578
+ G D+ ++ S L GH V V FHP+ V + S D TIR+W S
Sbjct: 239 TGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASC 298
Query: 579 VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALC--F 636
V+++ H++ V LS G +L S+ D D+ C F
Sbjct: 299 VQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQF 358
Query: 637 SRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNL-SHSADIKNSSLAYLVRSY 689
DG I + D +K+WD L + T N HS I +S+A+ Y
Sbjct: 359 HPDGLIFGTGTMDSQIKIWD---LKER--TNVANFPGHSGPI--TSIAFSENGY 405
>UNIPROTKB|Q9UMS4 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9606
"Homo sapiens" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000974 "Prp19 complex" evidence=IDA] [GO:0000209
"protein polyubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IMP]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013
GO:GO:0000151 GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:AJ131186
EMBL:BC008719 EMBL:BC018665 EMBL:BC018698 IPI:IPI00004968
RefSeq:NP_055317.1 UniGene:Hs.502705 ProteinModelPortal:Q9UMS4
SMR:Q9UMS4 IntAct:Q9UMS4 MINT:MINT-1454442 STRING:Q9UMS4
PhosphoSite:Q9UMS4 DMDM:55976619 REPRODUCTION-2DPAGE:IPI00004968
SWISS-2DPAGE:Q9UMS4 PaxDb:Q9UMS4 PeptideAtlas:Q9UMS4 PRIDE:Q9UMS4
DNASU:27339 Ensembl:ENST00000227524 GeneID:27339 KEGG:hsa:27339
UCSC:uc001nqf.3 GeneCards:GC11M060658 HGNC:HGNC:17896 HPA:CAB012448
MIM:608330 neXtProt:NX_Q9UMS4 PharmGKB:PA134941355
InParanoid:Q9UMS4 PhylomeDB:Q9UMS4 GenomeRNAi:27339 NextBio:50404
ArrayExpress:Q9UMS4 Bgee:Q9UMS4 CleanEx:HS_PRPF19
Genevestigator:Q9UMS4 GermOnline:ENSG00000110107 Uniprot:Q9UMS4
Length = 504
Score = 267 (99.0 bits), Expect = 4.5e-20, P = 4.5e-20
Identities = 70/245 (28%), Positives = 108/245 (44%)
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGH 501
V + D+ + + TL GH V + F P + L+ S S D TIR+WS+ C+ V + H
Sbjct: 246 VVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRAH 305
Query: 502 GHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVD-----CVQFHPNS 556
V + G Y S+ D+ WA R+ + C QFHP+
Sbjct: 306 ESAVTGLSLHATGDYLLSSSDDQY---WAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDG 362
Query: 557 NYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLS 616
TG+ D I++WD ++V GH P+ +++FS G +LA+A D +V +WDL
Sbjct: 363 LIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLR 422
Query: 617 NXXXXXXXXXXXDV-VRALCFSRDGNILASSGQDCSV---KLW-DFAKLSDEVG-TEEVN 670
+ V++L F + G LA G D + K W + ++ G T V
Sbjct: 423 KLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLTTGVA 482
Query: 671 LSHSA 675
H A
Sbjct: 483 FGHHA 487
Score = 181 (68.8 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 70/309 (22%), Positives = 118/309 (38%)
Query: 354 KIDKLKALREATKRVTLGPESLPSIACYTLLNA-RQQVTCAEISEDVSILAVGFSESYIK 412
K ++L R+ V L S+P I L + ++ ++V + F +S +
Sbjct: 200 KPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTGGADKNVVV----FDKSSEQ 255
Query: 413 LWSLVPQKLKAMKSS--DQLQDIEMECD-DILVRIMDERNAETTRTLVGHEGPVRKLSFS 469
+ + + K + S QD+ D +RI NA + + HE V LS
Sbjct: 256 ILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLH 315
Query: 470 PDRSLLLSCSQDNTIRLWSLLLWRCL--VVYKGHGHPVWDIKFSPHGYYFASAGHDRMAR 527
LLS S D + R L V + G + +F P G F + D +
Sbjct: 316 ATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIK 375
Query: 528 LWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLT-GHK 586
+W + F GH + + F N Y+AT + D +++LWD + + L +
Sbjct: 376 IWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNN 435
Query: 587 APVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASS 646
V +L F G +LA G D V ++ + + F +AS+
Sbjct: 436 FEVKSLIFDQSGTYLALGGTD--VQIYICKQWTEILHFTEHSGLTTGVAFGHHAKFIAST 493
Query: 647 GQDCSVKLW 655
G D S+K +
Sbjct: 494 GMDRSLKFY 502
Score = 180 (68.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 70/333 (21%), Positives = 130/333 (39%)
Query: 359 KALREATKRVTLGPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVP 418
+ + TK VT E+L ++ L Q V S S++ G +L + P
Sbjct: 115 RVIARLTKEVTAAREALATLKPQAGLIVPQAVP----SSQPSVVGAGEPMDLGELVGMTP 170
Query: 419 QKLKAMKSSDQLQDIEMECDDILV--RIMDERNAETTRTLVGHEG------P-VRKLSFS 469
+ ++ ++ + E + V ++ R + H G P + L
Sbjct: 171 EIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLC 230
Query: 470 P-DRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARL 528
P D + +L+ D + ++ + L KGH V + F P SA D R+
Sbjct: 231 PSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRI 290
Query: 529 WATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKA- 587
W+ + +++ H S V + H +Y+ + S D+ D TG + +T +
Sbjct: 291 WSVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSG 350
Query: 588 -PVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASS 646
+ F G + D + +WDL + ++ FS +G LA++
Sbjct: 351 CSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATA 410
Query: 647 GQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKN 679
D SVKLWD KL + + + L ++ ++K+
Sbjct: 411 ADDSSVKLWDLRKLKN---FKTLQLDNNFEVKS 440
Score = 164 (62.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 61/267 (22%), Positives = 119/267 (44%)
Query: 364 ATKRVTLGPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK--L 421
A K V + +S I TL ++VT ++ ++ I++WS VP +
Sbjct: 242 ADKNVVVFDKSSEQILA-TLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWS-VPNASCV 299
Query: 422 KAMKSSDQ-LQDIEMECD-DILVRIMDER-----NAETTRTL--VGHEGPVRKLS---FS 469
+ +++ + + + + D L+ D++ + +T R L V E L+ F
Sbjct: 300 QVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFH 359
Query: 470 PDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLW 529
PD + + + D+ I++W L + + GH P+ I FS +GYY A+A D +LW
Sbjct: 360 PDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLW 419
Query: 530 ATDSYHPLR-LFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAP 588
+ L + + +V + F + Y+A G +D ++++ C + + T H
Sbjct: 420 DLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTD--VQIYICKQWTEILHFTEHSGL 477
Query: 589 VYALSFSVCGRFLASAGGDGNVHMWDL 615
++F +F+AS G D ++ + L
Sbjct: 478 TTGVAFGHHAKFIASTGMDRSLKFYSL 504
Score = 151 (58.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 47/174 (27%), Positives = 70/174 (40%)
Query: 519 SAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH 578
+ G D+ ++ S L GH V V FHP+ + V + S D TIR+W S
Sbjct: 239 TGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASC 298
Query: 579 VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALC--F 636
V+++ H++ V LS G +L S+ D D+ C F
Sbjct: 299 VQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQF 358
Query: 637 SRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNL-SHSADIKNSSLAYLVRSY 689
DG I + D +K+WD L + T N HS I +S+A+ Y
Sbjct: 359 HPDGLIFGTGTMDSQIKIWD---LKER--TNVANFPGHSGPI--TSIAFSENGY 405
>UNIPROTKB|Q08E38 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9913
"Bos taurus" [GO:0000974 "Prp19 complex" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005819 "spindle" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0048711 "positive regulation of astrocyte differentiation"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV EMBL:BC123437
IPI:IPI00702434 RefSeq:NP_001069108.1 UniGene:Bt.62928
ProteinModelPortal:Q08E38 STRING:Q08E38 PRIDE:Q08E38
Ensembl:ENSBTAT00000019100 GeneID:513868 KEGG:bta:513868 CTD:27339
HOVERGEN:HBG053697 InParanoid:Q08E38 OrthoDB:EOG4V6ZGG
NextBio:20871070 Uniprot:Q08E38
Length = 504
Score = 267 (99.0 bits), Expect = 4.5e-20, P = 4.5e-20
Identities = 70/245 (28%), Positives = 108/245 (44%)
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGH 501
V + D+ + + TL GH V + F P + L+ S S D TIR+WS+ C+ V + H
Sbjct: 246 VVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQVVRAH 305
Query: 502 GHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVD-----CVQFHPNS 556
V + G Y S+ D+ WA R+ + C QFHP+
Sbjct: 306 ESAVTGLSLHATGDYLLSSSDDQY---WAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDG 362
Query: 557 NYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLS 616
TG+ D I++WD ++V GH P+ +++FS G +LA+A D +V +WDL
Sbjct: 363 LIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLR 422
Query: 617 NXXXXXXXXXXXDV-VRALCFSRDGNILASSGQDCSV---KLW-DFAKLSDEVG-TEEVN 670
+ V++L F + G LA G D + K W + ++ G T V
Sbjct: 423 KLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLTTGVA 482
Query: 671 LSHSA 675
H A
Sbjct: 483 FGHHA 487
Score = 181 (68.8 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 70/333 (21%), Positives = 130/333 (39%)
Query: 359 KALREATKRVTLGPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVP 418
+ + TK VT E+L ++ L Q V S S++ G +L + P
Sbjct: 115 RVIARLTKEVTAAREALATLKPQAGLIVPQAVP----SSQPSVVGAGEPMDLGELVGMTP 170
Query: 419 QKLKAMKSSDQLQDIEMECDDILV--RIMDERNAETTRTLVGHEG------P-VRKLSFS 469
+ ++ ++ + E + V ++ R + H G P + L
Sbjct: 171 EIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLC 230
Query: 470 P-DRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARL 528
P D + +L+ D + ++ + L KGH V + F P SA D R+
Sbjct: 231 PSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRI 290
Query: 529 WATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKA- 587
W+ + +++ H S V + H +Y+ + S D+ D TG + +T +
Sbjct: 291 WSVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSG 350
Query: 588 -PVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASS 646
+ F G + D + +WDL + ++ FS +G LA++
Sbjct: 351 CSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATA 410
Query: 647 GQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKN 679
D SVKLWD KL + + + L ++ ++K+
Sbjct: 411 ADDSSVKLWDLRKLKN---FKTLQLDNNFEVKS 440
Score = 179 (68.1 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 67/306 (21%), Positives = 115/306 (37%)
Query: 354 KIDKLKALREATKRVTLGPESLPSIACYTLLNA-RQQVTCAEISEDVSILAVGFSESYIK 412
K ++L R+ V L S+P I L + ++ ++V + SE +
Sbjct: 200 KPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKS-SEQILA 258
Query: 413 LWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDR 472
+K+ ++ + + D +RI NA + + HE V LS
Sbjct: 259 TLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATG 318
Query: 473 SLLLSCSQDNTIRLWSLLLWRCL--VVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWA 530
LLS S D + R L V + G + +F P G F + D ++W
Sbjct: 319 DYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWD 378
Query: 531 TDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLT-GHKAPV 589
+ F GH + + F N Y+AT + D +++LWD + + L + V
Sbjct: 379 LKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEV 438
Query: 590 YALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQD 649
+L F G +LA G D V ++ + + F +AS+G D
Sbjct: 439 KSLIFDQSGTYLALGGTD--VQIYICKQWTEILHFTEHSGLTTGVAFGHHAKFIASTGMD 496
Query: 650 CSVKLW 655
S+K +
Sbjct: 497 RSLKFY 502
Score = 164 (62.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 61/267 (22%), Positives = 119/267 (44%)
Query: 364 ATKRVTLGPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK--L 421
A K V + +S I TL ++VT ++ ++ I++WS VP +
Sbjct: 242 ADKNVVVFDKSSEQILA-TLKGHTKKVTSVVFHPSQELVFSASPDATIRIWS-VPNASCV 299
Query: 422 KAMKSSDQ-LQDIEMECD-DILVRIMDER-----NAETTRTL--VGHEGPVRKLS---FS 469
+ +++ + + + + D L+ D++ + +T R L V E L+ F
Sbjct: 300 QVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFH 359
Query: 470 PDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLW 529
PD + + + D+ I++W L + + GH P+ I FS +GYY A+A D +LW
Sbjct: 360 PDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLW 419
Query: 530 ATDSYHPLR-LFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAP 588
+ L + + +V + F + Y+A G +D ++++ C + + T H
Sbjct: 420 DLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTD--VQIYICKQWTEILHFTEHSGL 477
Query: 589 VYALSFSVCGRFLASAGGDGNVHMWDL 615
++F +F+AS G D ++ + L
Sbjct: 478 TTGVAFGHHAKFIASTGMDRSLKFYSL 504
Score = 150 (57.9 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 47/174 (27%), Positives = 69/174 (39%)
Query: 519 SAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH 578
+ G D+ ++ S L GH V V FHP+ V + S D TIR+W S
Sbjct: 239 TGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASC 298
Query: 579 VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALC--F 636
V+++ H++ V LS G +L S+ D D+ C F
Sbjct: 299 VQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQF 358
Query: 637 SRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNL-SHSADIKNSSLAYLVRSY 689
DG I + D +K+WD L + T N HS I +S+A+ Y
Sbjct: 359 HPDGLIFGTGTMDSQIKIWD---LKER--TNVANFPGHSGPI--TSIAFSENGY 405
>MGI|MGI:106247 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000245 "spliceosomal complex
assembly" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0000974 "Prp19 complex"
evidence=ISO] [GO:0001833 "inner cell mass cell proliferation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;ISA;IDA] [GO:0005681 "spliceosomal complex"
evidence=ISA;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IDA] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IMP] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
MGI:MGI:106247 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775 GO:GO:0005811
GO:GO:0003677 GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045665 GO:GO:0008610 GO:GO:0005681
InterPro:IPR000772 GO:GO:0045666 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000398 GO:GO:0000151
GO:GO:0048711 GO:GO:0001833 GO:GO:0000974 GO:GO:0048026
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG
EMBL:AF251503 EMBL:AF386760 EMBL:AK047693 EMBL:AK076998
EMBL:AK088769 EMBL:AK164681 EMBL:BC004070 IPI:IPI00222760
IPI:IPI00480440 IPI:IPI00480507 RefSeq:NP_001240772.1
RefSeq:NP_001240773.1 RefSeq:NP_598890.1 UniGene:Mm.225898
ProteinModelPortal:Q99KP6 SMR:Q99KP6 IntAct:Q99KP6 STRING:Q99KP6
PhosphoSite:Q99KP6 REPRODUCTION-2DPAGE:Q99KP6 PaxDb:Q99KP6
PRIDE:Q99KP6 Ensembl:ENSMUST00000025642 Ensembl:ENSMUST00000178868
GeneID:28000 KEGG:mmu:28000 UCSC:uc008grf.1 InParanoid:Q99KP6
NextBio:306504 Bgee:Q99KP6 Genevestigator:Q99KP6
GermOnline:ENSMUSG00000024735 Uniprot:Q99KP6
Length = 504
Score = 267 (99.0 bits), Expect = 4.5e-20, P = 4.5e-20
Identities = 70/245 (28%), Positives = 107/245 (43%)
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGH 501
V + D+ + TL GH V + F P + L+ S S D TIR+WS+ C+ V + H
Sbjct: 246 VVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAH 305
Query: 502 GHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVD-----CVQFHPNS 556
V + G Y S+ D+ WA R+ + C QFHP+
Sbjct: 306 ESAVTGLSLHATGDYLLSSSDDQY---WAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDG 362
Query: 557 NYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLS 616
TG+ D I++WD ++V GH P+ +++FS G +LA+A D +V +WDL
Sbjct: 363 LIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLR 422
Query: 617 NXXXXXXXXXXXDV-VRALCFSRDGNILASSGQDCSV---KLW-DFAKLSDEVG-TEEVN 670
+ V++L F + G LA G D + K W + ++ G T V
Sbjct: 423 KLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLTTGVA 482
Query: 671 LSHSA 675
H A
Sbjct: 483 FGHHA 487
Score = 182 (69.1 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 70/333 (21%), Positives = 130/333 (39%)
Query: 359 KALREATKRVTLGPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVP 418
+ + TK VT E+L ++ L Q V S S++ G +L + P
Sbjct: 115 RVIARLTKEVTAAREALATLKPQAGLIVPQAVP----SSQPSVVGAGEPMDLGELVGMTP 170
Query: 419 QKLKAMKSSDQLQDIEMECDDILV--RIMDERNAETTRTLVGHEG------P-VRKLSFS 469
+ ++ ++ + E + V ++ R + H G P + L
Sbjct: 171 EIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLC 230
Query: 470 P-DRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARL 528
P D + +L+ D + ++ + L KGH V + F P SA D R+
Sbjct: 231 PSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRI 290
Query: 529 WATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKA- 587
W+ + +++ H S V + H +Y+ + S D+ D TG + +T +
Sbjct: 291 WSVPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSG 350
Query: 588 -PVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASS 646
+ F G + D + +WDL + ++ FS +G LA++
Sbjct: 351 CSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATA 410
Query: 647 GQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKN 679
D SVKLWD KL + + + L ++ ++K+
Sbjct: 411 ADDSSVKLWDLRKLKN---FKTLQLDNNFEVKS 440
Score = 173 (66.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 68/309 (22%), Positives = 117/309 (37%)
Query: 354 KIDKLKALREATKRVTLGPESLPSIACYTLLNA-RQQVTCAEISEDVSILAVGFSESYIK 412
K ++L R+ V L S+P I L + ++ ++V + F +S +
Sbjct: 200 KPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTGGADKNVVV----FDKSTEQ 255
Query: 413 LWSLVPQKLKAMKSS--DQLQDIEMECD-DILVRIMDERNAETTRTLVGHEGPVRKLSFS 469
+ + + K + S Q++ D +RI N + + HE V LS
Sbjct: 256 ILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTGLSLH 315
Query: 470 PDRSLLLSCSQDNTIRLWSLLLWRCL--VVYKGHGHPVWDIKFSPHGYYFASAGHDRMAR 527
LLS S D + R L V + G + +F P G F + D +
Sbjct: 316 ATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIK 375
Query: 528 LWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLT-GHK 586
+W + F GH + + F N Y+AT + D +++LWD + + L +
Sbjct: 376 IWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNN 435
Query: 587 APVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASS 646
V +L F G +LA G D V ++ + + F +AS+
Sbjct: 436 FEVKSLIFDQSGTYLALGGTD--VQIYICKQWTEILHFTEHSGLTTGVAFGHHAKFIAST 493
Query: 647 GQDCSVKLW 655
G D S+K +
Sbjct: 494 GMDRSLKFY 502
Score = 165 (63.1 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 61/267 (22%), Positives = 119/267 (44%)
Query: 364 ATKRVTLGPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK--L 421
A K V + +S I TL ++VT ++ ++ I++WS VP +
Sbjct: 242 ADKNVVVFDKSTEQILA-TLKGHTKKVTSVVFHPSQELVFSASPDATIRIWS-VPNTSCV 299
Query: 422 KAMKSSDQ-LQDIEMECD-DILVRIMDER-----NAETTRTL--VGHEGPVRKLS---FS 469
+ +++ + + + + D L+ D++ + +T R L V E L+ F
Sbjct: 300 QVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFH 359
Query: 470 PDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLW 529
PD + + + D+ I++W L + + GH P+ I FS +GYY A+A D +LW
Sbjct: 360 PDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLW 419
Query: 530 ATDSYHPLR-LFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAP 588
+ L + + +V + F + Y+A G +D ++++ C + + T H
Sbjct: 420 DLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTD--VQIYICKQWTEILHFTEHSGL 477
Query: 589 VYALSFSVCGRFLASAGGDGNVHMWDL 615
++F +F+AS G D ++ + L
Sbjct: 478 TTGVAFGHHAKFIASTGMDRSLKFYSL 504
Score = 145 (56.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 46/174 (26%), Positives = 69/174 (39%)
Query: 519 SAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH 578
+ G D+ ++ + L GH V V FHP+ V + S D TIR+W S
Sbjct: 239 TGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSC 298
Query: 579 VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALC--F 636
V+++ H++ V LS G +L S+ D D+ C F
Sbjct: 299 VQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQF 358
Query: 637 SRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNL-SHSADIKNSSLAYLVRSY 689
DG I + D +K+WD L + T N HS I +S+A+ Y
Sbjct: 359 HPDGLIFGTGTMDSQIKIWD---LKER--TNVANFPGHSGPI--TSIAFSENGY 405
>RGD|708496 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19 homolog
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA;ISO] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO;ISS] [GO:0000974 "Prp19 complex"
evidence=IEA;ISO;ISS] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005811 "lipid particle"
evidence=IEA;ISO] [GO:0005819 "spindle" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA;ISO] [GO:0016607 "nuclear speck" evidence=IEA;ISO]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO]
[GO:0042802 "identical protein binding" evidence=IEA;ISO]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA;ISO] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA;ISO] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA;ISO]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 267 (99.0 bits), Expect = 4.5e-20, P = 4.5e-20
Identities = 70/245 (28%), Positives = 107/245 (43%)
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGH 501
V + D+ + TL GH V + F P + L+ S S D TIR+WS+ C+ V + H
Sbjct: 246 VVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAH 305
Query: 502 GHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVD-----CVQFHPNS 556
V + G Y S+ D+ WA R+ + C QFHP+
Sbjct: 306 ESAVTGLSLHATGDYLLSSSDDQY---WAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDG 362
Query: 557 NYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLS 616
TG+ D I++WD ++V GH P+ +++FS G +LA+A D +V +WDL
Sbjct: 363 LIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLR 422
Query: 617 NXXXXXXXXXXXDV-VRALCFSRDGNILASSGQDCSV---KLW-DFAKLSDEVG-TEEVN 670
+ V++L F + G LA G D + K W + ++ G T V
Sbjct: 423 KLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLTTGVA 482
Query: 671 LSHSA 675
H A
Sbjct: 483 FGHHA 487
Score = 182 (69.1 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 70/333 (21%), Positives = 130/333 (39%)
Query: 359 KALREATKRVTLGPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVP 418
+ + TK VT E+L ++ L Q V S S++ G +L + P
Sbjct: 115 RVIARLTKEVTAAREALATLKPQAGLIVPQAVP----SSQPSVVGAGEPMDLGELVGMTP 170
Query: 419 QKLKAMKSSDQLQDIEMECDDILV--RIMDERNAETTRTLVGHEG------P-VRKLSFS 469
+ ++ ++ + E + V ++ R + H G P + L
Sbjct: 171 EIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLC 230
Query: 470 P-DRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARL 528
P D + +L+ D + ++ + L KGH V + F P SA D R+
Sbjct: 231 PSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRI 290
Query: 529 WATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKA- 587
W+ + +++ H S V + H +Y+ + S D+ D TG + +T +
Sbjct: 291 WSVPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSG 350
Query: 588 -PVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASS 646
+ F G + D + +WDL + ++ FS +G LA++
Sbjct: 351 CSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATA 410
Query: 647 GQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKN 679
D SVKLWD KL + + + L ++ ++K+
Sbjct: 411 ADDSSVKLWDLRKLKN---FKTLQLDNNFEVKS 440
Score = 173 (66.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 68/309 (22%), Positives = 117/309 (37%)
Query: 354 KIDKLKALREATKRVTLGPESLPSIACYTLLNA-RQQVTCAEISEDVSILAVGFSESYIK 412
K ++L R+ V L S+P I L + ++ ++V + F +S +
Sbjct: 200 KPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTGGADKNVVV----FDKSTEQ 255
Query: 413 LWSLVPQKLKAMKSS--DQLQDIEMECD-DILVRIMDERNAETTRTLVGHEGPVRKLSFS 469
+ + + K + S Q++ D +RI N + + HE V LS
Sbjct: 256 ILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTGLSLH 315
Query: 470 PDRSLLLSCSQDNTIRLWSLLLWRCL--VVYKGHGHPVWDIKFSPHGYYFASAGHDRMAR 527
LLS S D + R L V + G + +F P G F + D +
Sbjct: 316 ATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIK 375
Query: 528 LWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLT-GHK 586
+W + F GH + + F N Y+AT + D +++LWD + + L +
Sbjct: 376 IWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNN 435
Query: 587 APVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASS 646
V +L F G +LA G D V ++ + + F +AS+
Sbjct: 436 FEVKSLIFDQSGTYLALGGTD--VQIYICKQWTEILHFTEHSGLTTGVAFGHHAKFIAST 493
Query: 647 GQDCSVKLW 655
G D S+K +
Sbjct: 494 GMDRSLKFY 502
Score = 165 (63.1 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 61/267 (22%), Positives = 119/267 (44%)
Query: 364 ATKRVTLGPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK--L 421
A K V + +S I TL ++VT ++ ++ I++WS VP +
Sbjct: 242 ADKNVVVFDKSTEQILA-TLKGHTKKVTSVVFHPSQELVFSASPDATIRIWS-VPNTSCV 299
Query: 422 KAMKSSDQ-LQDIEMECD-DILVRIMDER-----NAETTRTL--VGHEGPVRKLS---FS 469
+ +++ + + + + D L+ D++ + +T R L V E L+ F
Sbjct: 300 QVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFH 359
Query: 470 PDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLW 529
PD + + + D+ I++W L + + GH P+ I FS +GYY A+A D +LW
Sbjct: 360 PDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLW 419
Query: 530 ATDSYHPLR-LFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAP 588
+ L + + +V + F + Y+A G +D ++++ C + + T H
Sbjct: 420 DLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTD--VQIYICKQWTEILHFTEHSGL 477
Query: 589 VYALSFSVCGRFLASAGGDGNVHMWDL 615
++F +F+AS G D ++ + L
Sbjct: 478 TTGVAFGHHAKFIASTGMDRSLKFYSL 504
Score = 145 (56.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 46/174 (26%), Positives = 69/174 (39%)
Query: 519 SAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH 578
+ G D+ ++ + L GH V V FHP+ V + S D TIR+W S
Sbjct: 239 TGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSC 298
Query: 579 VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALC--F 636
V+++ H++ V LS G +L S+ D D+ C F
Sbjct: 299 VQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQF 358
Query: 637 SRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNL-SHSADIKNSSLAYLVRSY 689
DG I + D +K+WD L + T N HS I +S+A+ Y
Sbjct: 359 HPDGLIFGTGTMDSQIKIWD---LKER--TNVANFPGHSGPI--TSIAFSENGY 405
>UNIPROTKB|Q9JMJ4 [details] [associations]
symbol:Prpf19 "Pre-mRNA-processing factor 19" species:10116
"Rattus norvegicus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 267 (99.0 bits), Expect = 4.5e-20, P = 4.5e-20
Identities = 70/245 (28%), Positives = 107/245 (43%)
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGH 501
V + D+ + TL GH V + F P + L+ S S D TIR+WS+ C+ V + H
Sbjct: 246 VVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAH 305
Query: 502 GHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVD-----CVQFHPNS 556
V + G Y S+ D+ WA R+ + C QFHP+
Sbjct: 306 ESAVTGLSLHATGDYLLSSSDDQY---WAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDG 362
Query: 557 NYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLS 616
TG+ D I++WD ++V GH P+ +++FS G +LA+A D +V +WDL
Sbjct: 363 LIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLR 422
Query: 617 NXXXXXXXXXXXDV-VRALCFSRDGNILASSGQDCSV---KLW-DFAKLSDEVG-TEEVN 670
+ V++L F + G LA G D + K W + ++ G T V
Sbjct: 423 KLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLTTGVA 482
Query: 671 LSHSA 675
H A
Sbjct: 483 FGHHA 487
Score = 182 (69.1 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 70/333 (21%), Positives = 130/333 (39%)
Query: 359 KALREATKRVTLGPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVP 418
+ + TK VT E+L ++ L Q V S S++ G +L + P
Sbjct: 115 RVIARLTKEVTAAREALATLKPQAGLIVPQAVP----SSQPSVVGAGEPMDLGELVGMTP 170
Query: 419 QKLKAMKSSDQLQDIEMECDDILV--RIMDERNAETTRTLVGHEG------P-VRKLSFS 469
+ ++ ++ + E + V ++ R + H G P + L
Sbjct: 171 EIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLC 230
Query: 470 P-DRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARL 528
P D + +L+ D + ++ + L KGH V + F P SA D R+
Sbjct: 231 PSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRI 290
Query: 529 WATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKA- 587
W+ + +++ H S V + H +Y+ + S D+ D TG + +T +
Sbjct: 291 WSVPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSG 350
Query: 588 -PVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASS 646
+ F G + D + +WDL + ++ FS +G LA++
Sbjct: 351 CSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATA 410
Query: 647 GQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKN 679
D SVKLWD KL + + + L ++ ++K+
Sbjct: 411 ADDSSVKLWDLRKLKN---FKTLQLDNNFEVKS 440
Score = 173 (66.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 68/309 (22%), Positives = 117/309 (37%)
Query: 354 KIDKLKALREATKRVTLGPESLPSIACYTLLNA-RQQVTCAEISEDVSILAVGFSESYIK 412
K ++L R+ V L S+P I L + ++ ++V + F +S +
Sbjct: 200 KPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTGGADKNVVV----FDKSTEQ 255
Query: 413 LWSLVPQKLKAMKSS--DQLQDIEMECD-DILVRIMDERNAETTRTLVGHEGPVRKLSFS 469
+ + + K + S Q++ D +RI N + + HE V LS
Sbjct: 256 ILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTGLSLH 315
Query: 470 PDRSLLLSCSQDNTIRLWSLLLWRCL--VVYKGHGHPVWDIKFSPHGYYFASAGHDRMAR 527
LLS S D + R L V + G + +F P G F + D +
Sbjct: 316 ATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIK 375
Query: 528 LWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLT-GHK 586
+W + F GH + + F N Y+AT + D +++LWD + + L +
Sbjct: 376 IWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNN 435
Query: 587 APVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASS 646
V +L F G +LA G D V ++ + + F +AS+
Sbjct: 436 FEVKSLIFDQSGTYLALGGTD--VQIYICKQWTEILHFTEHSGLTTGVAFGHHAKFIAST 493
Query: 647 GQDCSVKLW 655
G D S+K +
Sbjct: 494 GMDRSLKFY 502
Score = 165 (63.1 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 61/267 (22%), Positives = 119/267 (44%)
Query: 364 ATKRVTLGPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK--L 421
A K V + +S I TL ++VT ++ ++ I++WS VP +
Sbjct: 242 ADKNVVVFDKSTEQILA-TLKGHTKKVTSVVFHPSQELVFSASPDATIRIWS-VPNTSCV 299
Query: 422 KAMKSSDQ-LQDIEMECD-DILVRIMDER-----NAETTRTL--VGHEGPVRKLS---FS 469
+ +++ + + + + D L+ D++ + +T R L V E L+ F
Sbjct: 300 QVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFH 359
Query: 470 PDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLW 529
PD + + + D+ I++W L + + GH P+ I FS +GYY A+A D +LW
Sbjct: 360 PDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLW 419
Query: 530 ATDSYHPLR-LFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAP 588
+ L + + +V + F + Y+A G +D ++++ C + + T H
Sbjct: 420 DLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTD--VQIYICKQWTEILHFTEHSGL 477
Query: 589 VYALSFSVCGRFLASAGGDGNVHMWDL 615
++F +F+AS G D ++ + L
Sbjct: 478 TTGVAFGHHAKFIASTGMDRSLKFYSL 504
Score = 145 (56.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 46/174 (26%), Positives = 69/174 (39%)
Query: 519 SAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH 578
+ G D+ ++ + L GH V V FHP+ V + S D TIR+W S
Sbjct: 239 TGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSC 298
Query: 579 VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALC--F 636
V+++ H++ V LS G +L S+ D D+ C F
Sbjct: 299 VQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQF 358
Query: 637 SRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNL-SHSADIKNSSLAYLVRSY 689
DG I + D +K+WD L + T N HS I +S+A+ Y
Sbjct: 359 HPDGLIFGTGTMDSQIKIWD---LKER--TNVANFPGHSGPI--TSIAFSENGY 405
>UNIPROTKB|E2R8L3 [details] [associations]
symbol:PRPF19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 InterPro:IPR013915
Pfam:PF08606 OMA:QWQELKV EMBL:AAEX03011680 EMBL:AAEX03011681
Ensembl:ENSCAFT00000026060 Uniprot:E2R8L3
Length = 513
Score = 267 (99.0 bits), Expect = 4.8e-20, P = 4.8e-20
Identities = 70/245 (28%), Positives = 108/245 (44%)
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGH 501
V + D+ + + TL GH V + F P + L+ S S D TIR+WS+ C+ V + H
Sbjct: 255 VVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQVVRAH 314
Query: 502 GHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVD-----CVQFHPNS 556
V + G Y S+ D+ WA R+ + C QFHP+
Sbjct: 315 ESAVTGLSLHATGDYLLSSSDDQY---WAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDG 371
Query: 557 NYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLS 616
TG+ D I++WD ++V GH P+ +++FS G +LA+A D +V +WDL
Sbjct: 372 LIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLR 431
Query: 617 NXXXXXXXXXXXDV-VRALCFSRDGNILASSGQDCSV---KLW-DFAKLSDEVG-TEEVN 670
+ V++L F + G LA G D + K W + ++ G T V
Sbjct: 432 KLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLTTGVA 491
Query: 671 LSHSA 675
H A
Sbjct: 492 FGHHA 496
Score = 182 (69.1 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 68/306 (22%), Positives = 115/306 (37%)
Query: 354 KIDKLKALREATKRVTLGPESLPSIACYTLLNA-RQQVTCAEISEDVSILAVGFSESYIK 412
K ++L R+ V L S+P I L A ++ ++V + SE +
Sbjct: 209 KPEELSKYRQVASHVGLHSASIPGILALDLCPADTNKILTGGADKNVVVFDKS-SEQILA 267
Query: 413 LWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDR 472
+K+ ++ + + D +RI NA + + HE V LS
Sbjct: 268 TLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATG 327
Query: 473 SLLLSCSQDNTIRLWSLLLWRCL--VVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWA 530
LLS S D + R L V + G + +F P G F + D ++W
Sbjct: 328 DYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWD 387
Query: 531 TDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLT-GHKAPV 589
+ F GH + + F N Y+AT + D +++LWD + + L + V
Sbjct: 388 LKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEV 447
Query: 590 YALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQD 649
+L F G +LA G D V ++ + + F +AS+G D
Sbjct: 448 KSLIFDQSGTYLALGGTD--VQIYICKQWTEILHFTEHSGLTTGVAFGHHAKFIASTGMD 505
Query: 650 CSVKLW 655
S+K +
Sbjct: 506 RSLKFY 511
Score = 179 (68.1 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 70/333 (21%), Positives = 129/333 (38%)
Query: 359 KALREATKRVTLGPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVP 418
+ + TK VT E+L ++ L Q V S S+ G +L + P
Sbjct: 124 RVIARLTKEVTAAREALATLKPQAGLIVPQAVP----SSQPSVAGAGEPMDLGELVGMTP 179
Query: 419 QKLKAMKSSDQLQDIEMECDDILV--RIMDERNAETTRTLVGHEG------P-VRKLSFS 469
+ ++ ++ + E + V ++ R + H G P + L
Sbjct: 180 EIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLC 239
Query: 470 P-DRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARL 528
P D + +L+ D + ++ + L KGH V + F P SA D R+
Sbjct: 240 PADTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRI 299
Query: 529 WATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKA- 587
W+ + +++ H S V + H +Y+ + S D+ D TG + +T +
Sbjct: 300 WSVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSG 359
Query: 588 -PVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASS 646
+ F G + D + +WDL + ++ FS +G LA++
Sbjct: 360 CSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATA 419
Query: 647 GQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKN 679
D SVKLWD KL + + + L ++ ++K+
Sbjct: 420 ADDSSVKLWDLRKLKN---FKTLQLDNNFEVKS 449
Score = 164 (62.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 61/267 (22%), Positives = 119/267 (44%)
Query: 364 ATKRVTLGPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK--L 421
A K V + +S I TL ++VT ++ ++ I++WS VP +
Sbjct: 251 ADKNVVVFDKSSEQILA-TLKGHTKKVTSVVFHPSQELVFSASPDATIRIWS-VPNASCV 308
Query: 422 KAMKSSDQ-LQDIEMECD-DILVRIMDER-----NAETTRTL--VGHEGPVRKLS---FS 469
+ +++ + + + + D L+ D++ + +T R L V E L+ F
Sbjct: 309 QVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFH 368
Query: 470 PDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLW 529
PD + + + D+ I++W L + + GH P+ I FS +GYY A+A D +LW
Sbjct: 369 PDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLW 428
Query: 530 ATDSYHPLR-LFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAP 588
+ L + + +V + F + Y+A G +D ++++ C + + T H
Sbjct: 429 DLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTD--VQIYICKQWTEILHFTEHSGL 486
Query: 589 VYALSFSVCGRFLASAGGDGNVHMWDL 615
++F +F+AS G D ++ + L
Sbjct: 487 TTGVAFGHHAKFIASTGMDRSLKFYSL 513
Score = 150 (57.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 47/174 (27%), Positives = 69/174 (39%)
Query: 519 SAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH 578
+ G D+ ++ S L GH V V FHP+ V + S D TIR+W S
Sbjct: 248 TGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASC 307
Query: 579 VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALC--F 636
V+++ H++ V LS G +L S+ D D+ C F
Sbjct: 308 VQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQF 367
Query: 637 SRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNL-SHSADIKNSSLAYLVRSY 689
DG I + D +K+WD L + T N HS I +S+A+ Y
Sbjct: 368 HPDGLIFGTGTMDSQIKIWD---LKER--TNVANFPGHSGPI--TSIAFSENGY 414
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 263 (97.6 bits), Expect = 5.0e-20, P = 5.0e-20
Identities = 63/246 (25%), Positives = 113/246 (45%)
Query: 380 CY-TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECD 438
CY T ++ C + +++A G ++ KLW + + + + I + +
Sbjct: 169 CYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFN 228
Query: 439 D----ILVRIMDER----NAETTR---TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLW 487
I+ D A+T R TL+GH + F+ D SL+L+ S D T +LW
Sbjct: 229 TSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLW 288
Query: 488 SLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDV 547
+ +C+ GH + D F G A+A D AR+++ + + GH ++
Sbjct: 289 DAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEI 348
Query: 548 DCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGD 607
+ F+P N + TGSSD+T R+WD TG +++L GH +++ +F+ G + + D
Sbjct: 349 SKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKD 408
Query: 608 GNVHMW 613
+W
Sbjct: 409 NTCRIW 414
Score = 262 (97.3 bits), Expect = 6.5e-20, P = 6.5e-20
Identities = 74/322 (22%), Positives = 135/322 (41%)
Query: 348 PLKDSEKIDKLKALREATKRVTLGPESLPSIACYTLLNAR-QQVTCAEISEDVSILAVGF 406
PL + + D++K L + + LG S + +L A +T +++ S G
Sbjct: 53 PLITASRSDQVKLLIQRLQN-KLGQHSNHKFYLFKVLRAHILPLTNVALNKSGSCFITGS 111
Query: 407 SESYIKLWSLVP-QKLKAMKSS-DQLQDIEMEC---DDILVRIMDER----NAETTR--- 454
+ KLW ++L ++ + + I D I D+ + ET +
Sbjct: 112 YDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYH 171
Query: 455 TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG 514
T GH + LSF+P +L+ + S D T +LW + + GH + + F+ G
Sbjct: 172 TFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSG 231
Query: 515 YYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCV 574
+ D +W D+ + +GH +++ F+ + + + TGS D+T +LWD V
Sbjct: 232 NRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAV 291
Query: 575 TGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRAL 634
G V LTGH + F G+ +A+A DG ++ + + +
Sbjct: 292 NGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKI 351
Query: 635 CFSRDGNILASSGQDCSVKLWD 656
F+ GN L + D + ++WD
Sbjct: 352 SFNPQGNRLLTGSSDKTARIWD 373
Score = 252 (93.8 bits), Expect = 9.6e-19, P = 9.6e-19
Identities = 56/221 (25%), Positives = 100/221 (45%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFS-PDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
D ++ D + E TL GH V ++F+ P + + S D T +LWS+ +C
Sbjct: 113 DRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHT 172
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
++GH + + F+P A+ D A+LW S + GH +++ + F+ + N
Sbjct: 173 FRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGN 232
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
+ TGS D T+ +W+ TG V L GH A + + F+ + + D +WD N
Sbjct: 233 RIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVN 292
Query: 618 XXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFA 658
D + CF G ++A++ D + +++ A
Sbjct: 293 GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAA 333
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 244 (91.0 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 57/197 (28%), Positives = 93/197 (47%)
Query: 456 LVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGY 515
L GH PV ++ F P S+++S S+D TI++W KGH V DI F G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 516 YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT 575
AS D +LW + +R GH +V V PN +++ + S D+TI++W+ T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVAT 223
Query: 576 GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALC 635
G V+ TGH+ V + + G +AS+ D V +W ++ VV +
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Query: 636 FSRDG---NILASSGQD 649
++ + IL ++G +
Sbjct: 284 WAPESAHPTILEATGSE 300
Score = 232 (86.7 bits), Expect = 5.1e-20, Sum P(3) = 5.1e-20
Identities = 47/158 (29%), Positives = 80/158 (50%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
+D +++ D + RTL GH V+ +SF LL SCS D TI+LW + C+
Sbjct: 128 EDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRT 187
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
GH H V + P+G + SA D+ ++W + + ++ F GH V V+ + +
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFS 595
+A+ S+D+T+R+W T L H+ V +S++
Sbjct: 248 LIASSSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Score = 196 (74.1 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 48/194 (24%), Positives = 92/194 (47%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKA-MKSSDQLQD-IEMECDD 439
T R+ V ++D +++A ++ +++W + ++ KA ++ + + + I +
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPES 288
Query: 440 ILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYK 499
I++ +ET ++ G GP LLS S+D TI++W + + CL+
Sbjct: 289 AHPTILEATGSETKKS--GKPGP-----------FLLSGSRDKTIKMWDVSIGMCLMTLV 335
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + V + P G Y S D+ R+W + + H V + FH + YV
Sbjct: 336 GHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYV 395
Query: 560 ATGSSDRTIRLWDC 573
TGS D+T+++W+C
Sbjct: 396 VTGSVDQTVKVWEC 409
Score = 182 (69.1 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 43/156 (27%), Positives = 72/156 (46%)
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH PV + F P SA D ++W ++ R GH V + F +
Sbjct: 106 GHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLL 165
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXX 619
A+ S+D TI+LWD +R + GH V +++ G + SA D + MW+++
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGY 225
Query: 620 XXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
+ VR + ++DG ++ASS D +V++W
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVW 261
Score = 177 (67.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 37/117 (31%), Positives = 57/117 (48%)
Query: 542 GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFL 601
GH S V V FHP + + + S D TI++WD TG R L GH V +SF G+ L
Sbjct: 106 GHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLL 165
Query: 602 ASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFA 658
AS D + +WD V ++ +G+ + S+ +D ++K+W+ A
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVA 222
Score = 169 (64.5 bits), Expect = 1.7e-12, Sum P(3) = 1.7e-12
Identities = 49/201 (24%), Positives = 90/201 (44%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKL-KAMKS-SDQLQDIEME-- 436
Y L R VT S++ ++ IK+W + +K +D +QDI +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHT 161
Query: 437 ------CD-DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL 489
C D+ +++ D + E RT+ GH+ V ++ P+ ++S S+D TI++W +
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 490 LLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC 549
C+ + GH V ++ + G AS+ +D+ R+W + H V+C
Sbjct: 222 ATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 550 VQFHPNSNYV----ATGSSDR 566
+ + P S + ATGS +
Sbjct: 282 ISWAPESAHPTILEATGSETK 302
Score = 129 (50.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 31/128 (24%), Positives = 55/128 (42%)
Query: 529 WATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAP 588
WA +S HP L + + + ++ +GS D+TI++WD G + L GH
Sbjct: 284 WAPESAHPTIL---EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNW 340
Query: 589 VYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQ 648
V + G+++ S D + +WD N V +L F + + +
Sbjct: 341 VRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSV 400
Query: 649 DCSVKLWD 656
D +VK+W+
Sbjct: 401 DQTVKVWE 408
Score = 126 (49.4 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 31/104 (29%), Positives = 46/104 (44%)
Query: 582 LTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGN 641
L+GH++PV + F + SA D + +WD D V+ + F G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 642 ILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYL 685
+LAS D ++KLWDF G E + H D SS+A +
Sbjct: 164 LLASCSADMTIKLWDFQ------GFECIRTMHGHDHNVSSVAIM 201
Score = 124 (48.7 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 26/101 (25%), Positives = 46/101 (45%)
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
G + S D+ ++W L VGH + V V HP Y+ + + D+T+R+WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDY 367
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+ L+ H+ V +L F ++ + D V +W+
Sbjct: 368 KNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 75 (31.5 bits), Expect = 5.1e-20, Sum P(3) = 5.1e-20
Identities = 16/60 (26%), Positives = 26/60 (43%)
Query: 598 GRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDF 657
G FL S D + MWD+S + VR + G + S D ++++WD+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDY 367
Score = 37 (18.1 bits), Expect = 5.1e-20, Sum P(3) = 5.1e-20
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 143 NLYEDAYQDLKKFIENSLDV 162
N YE+AY KK E LD+
Sbjct: 22 NGYEEAYSVFKK--EAELDM 39
>SGD|S000006382 [details] [associations]
symbol:PRP4 "Splicing factor" species:4932 "Saccharomyces
cerevisiae" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IPI] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 SGD:S000006382 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006949 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 EMBL:U25842 GO:GO:0046540
EMBL:M26597 HOGENOM:HOG000157615 KO:K12662
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:M28518 PIR:A32569
RefSeq:NP_015504.1 ProteinModelPortal:P20053 SMR:P20053
DIP:DIP-2607N IntAct:P20053 MINT:MINT-423902 STRING:P20053
PaxDb:P20053 EnsemblFungi:YPR178W GeneID:856307 KEGG:sce:YPR178W
CYGD:YPR178w OrthoDB:EOG4V1B90 NextBio:981676 Genevestigator:P20053
GermOnline:YPR178W Uniprot:P20053
Length = 465
Score = 263 (97.6 bits), Expect = 7.4e-20, Sum P(2) = 7.4e-20
Identities = 76/279 (27%), Positives = 132/279 (47%)
Query: 426 SSDQLQDIEMECDDILVRI------MDERNAET----TRTLVGHEGPVRKLSFSPD-RSL 474
S+ + + + DD++V + N++T T+ L H G + + + PD +
Sbjct: 174 STKPISAVSLSTDDMVVATGSWAGDLQVLNSQTLQPLTQKLDSHVGKIGAIDWHPDSNNQ 233
Query: 475 LLSCSQDNTIRLWSLLL----WRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWA 530
++SC++D I+ + R L GH + D+K+ P G + SA HD RLW
Sbjct: 234 MISCAEDGLIKNFQYSNEEGGLRLLGDLVGHERRISDVKYHPSGKFIGSASHDMTWRLWD 293
Query: 531 TDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVY 590
++ L L GH V + F + + V +G D LWD +GS V L GH P+Y
Sbjct: 294 ASTHQELLLQEGHDKGVFSLSFQCDGSLVCSGGMDSLSMLWDIRSGSKVMTLAGHSKPIY 353
Query: 591 ALSFSVCGRFLASAGGDGNVHMWDLS--NXXXXXXXXXXXDVVRALCFSRD--GNILASS 646
+++S G +A+ GGDG +++WD+ + ++V + FS++ G L S
Sbjct: 354 TVAWSPNGYQVATGGGDGIINVWDIRKRDEGQLNQILAHRNIVTQVRFSKEDGGKKLVSC 413
Query: 647 GQDCSVKLWD---FAKLSDEVG-TEEVNLSHSADIKNSS 681
G D + ++ + K+ G T+++ S DI N+S
Sbjct: 414 GYDNLINVYSSDTWLKMGSLAGHTDKII---SLDISNNS 449
Score = 227 (85.0 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 59/205 (28%), Positives = 90/205 (43%)
Query: 456 LVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGY 515
LVGHE + + + P + S S D T RLW + L++ +GH V+ + F G
Sbjct: 261 LVGHERRISDVKYHPSGKFIGSASHDMTWRLWDASTHQELLLQEGHDKGVFSLSFQCDGS 320
Query: 516 YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT 575
S G D ++ LW S + GH + V + PN VATG D I +WD
Sbjct: 321 LVCSGGMDSLSMLWDIRSGSKVMTLAGHSKPIYTVAWSPNGYQVATGGGDGIINVWDIRK 380
Query: 576 GSHVRL--LTGHKAPVYALSFSV--CGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVV 631
+L + H+ V + FS G+ L S G D ++++ D +
Sbjct: 381 RDEGQLNQILAHRNIVTQVRFSKEDGGKKLVSCGYDNLINVYSSDTWLKMGSLAGHTDKI 440
Query: 632 RALCFSRDGNILASSGQDCSVKLWD 656
+L S + + L S G D S+KLW+
Sbjct: 441 ISLDISNNSHFLVSGGWDRSIKLWN 465
Score = 143 (55.4 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 41/176 (23%), Positives = 80/176 (45%)
Query: 412 KLWSL-VPQKLKAMKSSDQ-LQDIEMECD---------DILVRIMDERNAETTRTLVGHE 460
+LW Q+L + D+ + + +CD D L + D R+ TL GH
Sbjct: 290 RLWDASTHQELLLQEGHDKGVFSLSFQCDGSLVCSGGMDSLSMLWDIRSGSKVMTLAGHS 349
Query: 461 GPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWR--CLVVYKGHGHPVWDIKFSPH--GYY 516
P+ +++SP+ + + D I +W + L H + V ++FS G
Sbjct: 350 KPIYTVAWSPNGYQVATGGGDGIINVWDIRKRDEGQLNQILAHRNIVTQVRFSKEDGGKK 409
Query: 517 FASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWD 572
S G+D + ++++D++ + GH + + NS+++ +G DR+I+LW+
Sbjct: 410 LVSCGYDNLINVYSSDTWLKMGSLAGHTDKIISLDISNNSHFLVSGGWDRSIKLWN 465
Score = 43 (20.2 bits), Expect = 7.4e-20, Sum P(2) = 7.4e-20
Identities = 14/64 (21%), Positives = 35/64 (54%)
Query: 172 YPVLVHMYIELVYNGH-EHQAT-----EMLHKHL---MDHEPHYQEDLRKLSSVTKRDQI 222
Y L ++ ++L + G ++++T ++ H+ L ++ P ++R+L S+ K+ ++
Sbjct: 4 YIALENLPVDLQHKGATQNESTADILKQLPHERLQAVLEKIPEEDLEVRRLLSILKKPEV 63
Query: 223 RTNE 226
NE
Sbjct: 64 VENE 67
Score = 39 (18.8 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 87 PDKNTLITMLKLLRQYNLRGTEEQLKKEI 115
P + LI + L Y+L + ++L+KE+
Sbjct: 112 PATSELIFARRFLINYSLERSRKRLQKEM 140
Score = 39 (18.8 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 263 IVQEHLYFDMYEGEATRQDNKAKIYYGMPRE 293
I E+L D+ AT+ ++ A I +P E
Sbjct: 5 IALENLPVDLQHKGATQNESTADILKQLPHE 35
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 264 (98.0 bits), Expect = 7.7e-20, P = 7.7e-20
Identities = 66/219 (30%), Positives = 95/219 (43%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D ++I D + TL GH VR L+ SP L SC +D ++ W L + + Y
Sbjct: 184 DRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHY 243
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
GH V+ +K P +AG D +AR+W + + + GH S V +
Sbjct: 244 HGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNVHVLSGHKSTVASLAVQEFDPQ 303
Query: 559 VATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNX 618
V TGS D TIRLWD G + LT HK V ALS F ++G N+ W
Sbjct: 304 VVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALSLHP-DEFTFASGSSDNIKHWKFPEG 362
Query: 619 XXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDF 657
+V L + D N++ S + S+ WD+
Sbjct: 363 AFMGNFEGHNAIVNTLSINSD-NVMFSGADNGSMCFWDW 400
Score = 251 (93.4 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 62/217 (28%), Positives = 96/217 (44%)
Query: 443 RIMDERNAETT--RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKG 500
+I E +A T R + GH G VR + P + + D TI++W L + G
Sbjct: 144 QIRPEWHAPWTLMRVISGHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTG 203
Query: 501 HGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVA 560
H V + SP Y S G D+M + W ++ +R + GH S V ++ HP + +
Sbjct: 204 HIATVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLV 263
Query: 561 TGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXX 620
T D R+WD T +V +L+GHK+ V +L+ + + D + +WDL+
Sbjct: 264 TAGRDAVARVWDMRTRQNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKT 323
Query: 621 XXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDF 657
VRAL D AS D ++K W F
Sbjct: 324 LTTLTHHKKTVRALSLHPDEFTFASGSSD-NIKHWKF 359
Score = 156 (60.0 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 54/236 (22%), Positives = 89/236 (37%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSD--QLQDIEME--------C-D 438
V C ++ G + IK+W L LK + ++ + + C +
Sbjct: 166 VRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGE 225
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +V+ D + R GH V L P +L++ +D R+W + + + V
Sbjct: 226 DKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNVHVL 285
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
GH V + + D RLW + L H V + HP+
Sbjct: 286 SGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALSLHPDEFT 345
Query: 559 VATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
A+GSSD I+ W G+ + GH A V LS + + S +G++ WD
Sbjct: 346 FASGSSDN-IKHWKFPEGAFMGNFEGHNAIVNTLSIN-SDNVMFSGADNGSMCFWD 399
>UNIPROTKB|P74598 [details] [associations]
symbol:sll1491 "Uncharacterized WD repeat-containing
protein sll1491" species:1111708 "Synechocystis sp. PCC 6803
substr. Kazusa" [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0030288 EMBL:BA000022
GenomeReviews:BA000022_GR PIR:S76794 RefSeq:NP_442894.1
RefSeq:YP_005652955.1 ProteinModelPortal:P74598 IntAct:P74598
GeneID:12255406 GeneID:952007 KEGG:syn:sll1491 KEGG:syy:SYNGTS_3002
PATRIC:23843592 OMA:KMPEQTI ProtClustDB:CLSK2301952 Uniprot:P74598
Length = 348
Score = 252 (93.8 bits), Expect = 7.9e-20, P = 7.9e-20
Identities = 74/299 (24%), Positives = 132/299 (44%)
Query: 376 PSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSS--DQLQDI 433
PS+A L + +T I+ D LAV +++ I L L Q++ + S + D+
Sbjct: 50 PSVAVENLSGFQGIITALNITPDGKYLAVATADNQITLIDLANQEVVYSQRSPVNNFADL 109
Query: 434 EMECDDILVRIMDERNAETTR--------TLVGHEGPVRKLSFSPDRSLLLSCSQ-DNTI 484
+ D + I + N + R TLVGH V ++FSPD ++S S D TI
Sbjct: 110 AISADGQWLAIAADNNVDVRRVRDGMRVETLVGHTDKVSGVAFSPDGETIVSVSGGDRTI 169
Query: 485 RLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASA--GHDRMARLWATDSYHPLRLFVG 542
R+W + + P + F+P G F + G DR + W +++ L
Sbjct: 170 RIWERASGNLIQTLADNLGPTTSVVFTPDGSQFITGAIGQDRTIKFWDANTFELLGTSPQ 229
Query: 543 HYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLA 602
++ + P+ + G+ ++ W+ + + G + ++ S R++A
Sbjct: 230 QPGFINGLAVTPDGRKLV-GAVRNFVKAWNLADAKELFSVRGPSLEINTIAVSPNNRWVA 288
Query: 603 SAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAKLS 661
+A +G + ++DL+N V +L FS DGN L S +D +VK+WD + L+
Sbjct: 289 TANKEGTIMIFDLANGKQVTTLRGHQGWVLSLAFSPDGNTLYSGAEDKTVKIWDLSALA 347
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 244 (91.0 bits), Expect = 9.6e-20, P = 9.6e-20
Identities = 71/237 (29%), Positives = 109/237 (45%)
Query: 455 TLVGHEGPVRKLSFSP-DRSLLLSCSQDNTIRLWSLLL-------WRCLVVYKGHGHPVW 506
TL+GH G V +++ +P D ++S S+D T+ +W L + +Y GH H +
Sbjct: 10 TLIGHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLY-GHSHFIS 68
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
D+ S G Y S D+ RLW + R F GH DV V F ++ + +GS D+
Sbjct: 69 DVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDK 128
Query: 567 TIRLWDCVTGSHVRLLT-GHKAPVYALSFSV--CGRFLASAGGDGNVHMWDLSNXXXXXX 623
TI+LW+ + + GH V + FS + S G D V +W+L+N
Sbjct: 129 TIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNN 188
Query: 624 XXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNS 680
+ + S DG++ S G+D LWD L+D G L H+ DI N+
Sbjct: 189 HHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWD---LND--GKNLYTLEHN-DIINA 239
Score = 238 (88.8 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 70/241 (29%), Positives = 103/241 (42%)
Query: 441 LVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKG 500
L R D + L GH + + S D + LS S D T+RLW L + ++G
Sbjct: 45 LTRDEDTNYGYPQKRLYGHSHFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEG 104
Query: 501 HGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFV-GHYSDVDCVQFHPN-SNY 558
H V + FS S D+ +LW T + + GH V CV+F PN SN
Sbjct: 105 HTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNP 164
Query: 559 VATGSS-DRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
+ DRT+++W+ GH + ++ S G S G D +WDL N
Sbjct: 165 IIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDL-N 223
Query: 618 XXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFA--KLSDEVGTEEVNLSHSA 675
D++ ALCFS + L + S+K+WD A K +E+ E V+ + A
Sbjct: 224 DGKNLYTLEHNDIINALCFSPNRYWLCVA-YGPSIKIWDLACKKTVEELRPEVVSPTSKA 282
Query: 676 D 676
D
Sbjct: 283 D 283
Score = 196 (74.1 bits), Expect = 7.4e-13, P = 7.4e-13
Identities = 63/230 (27%), Positives = 100/230 (43%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +R+ D +TTR GH V ++FS D ++S S+D TI+LW+ L C
Sbjct: 85 DQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLA-ECKFTI 143
Query: 499 KGHGHPVWD--IKFSP-HGY-YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHP 554
+ GH W ++FSP H S G DR ++W + GH ++ V P
Sbjct: 144 QEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSP 203
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+ + +G D LWD G ++ L H + AL FS +L A G ++ +WD
Sbjct: 204 DGSLCTSGGKDSKALLWDLNDGKNLYTLE-HNDIINALCFSPNRYWLCVAYGP-SIKIWD 261
Query: 615 LSNXXXXXXX-------XXXXDVVR--ALCFSRDGNILASSGQDCSVKLW 655
L+ D + +L +S DG L + D ++++W
Sbjct: 262 LACKKTVEELRPEVVSPTSKADQPQCLSLAWSTDGQTLFAGYSDNTIRVW 311
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 51/175 (29%), Positives = 80/175 (45%)
Query: 458 GHEGPVRKLSFSPDRS--LLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVW--DIKFSPH 513
GH V + FSP+ S +++SC D T+++W+L C + HGH + + SP
Sbjct: 147 GHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLA--NCKLKNNHHGHNGYLNTVTVSPD 204
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDV-DCVQFHPNSNY--VATGSSDRTIRL 570
G S G D A LW D L+ ++D+ + + F PN + VA G S I++
Sbjct: 205 GSLCTSGGKDSKALLW--DLNDGKNLYTLEHNDIINALCFSPNRYWLCVAYGPS---IKI 259
Query: 571 WDCVTGSHVRLLTGH------KA--P-VYALSFSVCGRFLASAGGDGNVHMWDLS 616
WD V L KA P +L++S G+ L + D + +W +S
Sbjct: 260 WDLACKKTVEELRPEVVSPTSKADQPQCLSLAWSTDGQTLFAGYSDNTIRVWQVS 314
>MGI|MGI:1915086 [details] [associations]
symbol:Wdr83 "WD repeat domain containing 83" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915086 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:AY365434 EMBL:AK005790 EMBL:AK020654 EMBL:BC005587
EMBL:BC019369 EMBL:BC094624 IPI:IPI00118714 IPI:IPI00407931
IPI:IPI00624217 RefSeq:NP_080675.2 UniGene:Mm.334680
ProteinModelPortal:Q9DAJ4 SMR:Q9DAJ4 STRING:Q9DAJ4
PhosphoSite:Q9DAJ4 PRIDE:Q9DAJ4 Ensembl:ENSMUST00000093357
Ensembl:ENSMUST00000149050 GeneID:67836 KEGG:mmu:67836
UCSC:uc009mph.1 InParanoid:Q9DAJ4 NextBio:325661 Bgee:Q9DAJ4
CleanEx:MM_1500041N16RIK Genevestigator:Q9DAJ4
GermOnline:ENSMUSG00000005150 Uniprot:Q9DAJ4
Length = 315
Score = 244 (91.0 bits), Expect = 9.6e-20, P = 9.6e-20
Identities = 61/203 (30%), Positives = 92/203 (45%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
+TL +G VR + F+ D + L+C D T++LW+ L L Y GHG+ V D S
Sbjct: 19 KTLDCSQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFD 78
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
+ S G D+ LW + +R F GH V+ VQF+ + + +GS D ++R WDC
Sbjct: 79 NSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDC 138
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRA 633
+ + T +A S V + + DG V +DL +
Sbjct: 139 RSRKPEPVQTLDEARDGISSVKVSDHEILAGSVDGRVRRYDLR--MGQVSSDYVGSPITC 196
Query: 634 LCFSRDGNILASSGQDCSVKLWD 656
CFSRDG S D +++L D
Sbjct: 197 TCFSRDGQCTLISSLDSTLRLLD 219
Score = 137 (53.3 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 55/222 (24%), Positives = 86/222 (38%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D V + D + R GH G V + F+ + +++LS S D+++R W + V
Sbjct: 88 DKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKPEPVQ 147
Query: 499 K-GHGHP-VWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNS 556
+ +K S H S D R + +VG S + C F +
Sbjct: 148 TLDEARDGISSVKVSDHEILAGSV--DGRVRRYDLRMGQVSSDYVG--SPITCTCFSRDG 203
Query: 557 NYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGR--FLASAGGDGNVHMWD 614
S D T+RL D TG + GHK Y L + R + S DG V WD
Sbjct: 204 QCTLISSLDSTLRLLDKDTGELLGEYVGHKNQQYKLDCCLSERDTHVVSCSEDGKVFFWD 263
Query: 615 LSNXXXXXXXXXXXDVVRALCFS-RDGNILASSGQDCSVKLW 655
L +VV++L + + +L + G S++ W
Sbjct: 264 LVEGALALALPVGSNVVQSLAYHPTEPCLLTAMGG--SIQYW 303
>ZFIN|ZDB-GENE-030131-1946 [details] [associations]
symbol:wsb1 "WD repeat and SOCS box-containing 1"
species:7955 "Danio rerio" [GO:0035556 "intracellular signal
transduction" evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143
ZFIN:ZDB-GENE-030131-1946 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HSSP:P16649 EMBL:BC054567
IPI:IPI00486577 RefSeq:NP_955927.1 UniGene:Dr.33037
ProteinModelPortal:Q7T2F6 STRING:Q7T2F6 Ensembl:ENSDART00000008854
GeneID:323226 KEGG:dre:323226 CTD:26118 HOGENOM:HOG000063727
HOVERGEN:HBG034543 InParanoid:Q7T2F6 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ NextBio:20808143 Bgee:Q7T2F6 Uniprot:Q7T2F6
Length = 423
Score = 261 (96.9 bits), Expect = 9.7e-20, P = 9.7e-20
Identities = 75/232 (32%), Positives = 111/232 (47%)
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLL-SCSQDNTIRLWSLLLWRCLV-VYK 499
++I D + L+ H VR L+F+PD SL+L S S+D T+R+W L +V V +
Sbjct: 153 IKIWDVYTGKLLLNLMDHTDIVRDLTFAPDGSLVLVSASRDKTLRVWDLKDDGNMVKVLR 212
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + V+ FSP S G + LW D Y +R GH++DV C +F P+ +
Sbjct: 213 GHQNWVYCSAFSPDSSVLCSVGAGKAVFLWDMDKYTLIRKLEGHHNDVVCCEFSPDGALL 272
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGH----KAPVYA--------LSFSVC--GRFLASAG 605
AT S D + +WD T + V L GH +P++A S + C GR +AS
Sbjct: 273 ATASYDTRVIVWDPHTAT-VLLELGHLFPPPSPIFAGGANDRWVRSVAFCHDGRHIASVT 331
Query: 606 GDGNVHMWDLSNXXXXXXXXXXXDVVRALC--FSRDGNILASSGQDCSVKLW 655
D V W + + LC FS DG++L++ +D SV W
Sbjct: 332 DDRLVRFWSIDEKSPQAIG----PLTNGLCCAFSTDGSVLSAGSRDGSVHFW 379
Score = 185 (70.2 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 56/214 (26%), Positives = 91/214 (42%)
Query: 465 KLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG-YYFASAGHD 523
+ F D+ LL + + I++W + + L+ H V D+ F+P G SA D
Sbjct: 134 RFKFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLMDHTDIVRDLTFAPDGSLVLVSASRD 193
Query: 524 RMARLW-ATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLL 582
+ R+W D + +++ GH + V C F P+S+ + + + + + LWD + +R L
Sbjct: 194 KTLRVWDLKDDGNMVKVLRGHQNWVYCSAFSPDSSVLCSVGAGKAVFLWDMDKYTLIRKL 253
Query: 583 TGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXX------------XXXXXDV 630
GH V FS G LA+A D V +WD D
Sbjct: 254 EGHHNDVVCCEFSPDGALLATASYDTRVIVWDPHTATVLLELGHLFPPPSPIFAGGANDR 313
Query: 631 -VRALCFSRDGNILASSGQDCSVKLWDFAKLSDE 663
VR++ F DG +AS D V+ W + S +
Sbjct: 314 WVRSVAFCHDGRHIASVTDDRLVRFWSIDEKSPQ 347
Score = 166 (63.5 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 57/204 (27%), Positives = 92/204 (45%)
Query: 394 EISEDVSILAVGFSESYIKLWSLVPQKL--KAMKSSDQLQDIEMECDDILV--------- 442
+ +D +LA G + IK+W + KL M +D ++D+ D LV
Sbjct: 136 KFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLMDHTDIVRDLTFAPDGSLVLVSASRDKT 195
Query: 443 -RIMDERN-AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKG 500
R+ D ++ + L GH+ V +FSPD S+L S + LW + + + +G
Sbjct: 196 LRVWDLKDDGNMVKVLRGHQNWVYCSAFSPDSSVLCSVGAGKAVFLWDMDKYTLIRKLEG 255
Query: 501 HGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVA 560
H + V +FSP G A+A +D +W + L L +GH F P S A
Sbjct: 256 HHNDVVCCEFSPDGALLATASYDTRVIVWDPHTATVL-LELGHL-------FPPPSPIFA 307
Query: 561 TGSSDRTIR-LWDCVTGSHVRLLT 583
G++DR +R + C G H+ +T
Sbjct: 308 GGANDRWVRSVAFCHDGRHIASVT 331
Score = 152 (58.6 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 43/154 (27%), Positives = 69/154 (44%)
Query: 506 WD-IKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSS 564
W KF A+ ++ ++W + L + H V + F P+ + V +S
Sbjct: 132 WHRFKFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLMDHTDIVRDLTFAPDGSLVLVSAS 191
Query: 565 -DRTIRLWDCVT-GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXX 622
D+T+R+WD G+ V++L GH+ VY +FS L S G V +WD+
Sbjct: 192 RDKTLRVWDLKDDGNMVKVLRGHQNWVYCSAFSPDSSVLCSVGAGKAVFLWDMDKYTLIR 251
Query: 623 XXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ V FS DG +LA++ D V +WD
Sbjct: 252 KLEGHHNDVVCCEFSPDGALLATASYDTRVIVWD 285
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 243 (90.6 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 63/205 (30%), Positives = 94/205 (45%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
RT+ +G VR + F+ D + LL+C D +++LWS+ L Y GHG+ V D S
Sbjct: 19 RTVDCQQGAVRAVRFNADGNYLLTCGSDKSLKLWSVSRGTLLKTYSGHGYEVLDADGSYD 78
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
S D+ LW S R GH V+CVQF+ + + +GS D T+R WD
Sbjct: 79 NSQLCSCSSDKTVILWDVASGQVTRKLRGHAGKVNCVQFNEEATVMLSGSIDGTVRCWDT 138
Query: 574 VTG--SHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVV 631
+ +++L + + +L S L + DG V +DL +
Sbjct: 139 RSRRMEPIQILDESQDGISSLKVSE--HELLTGSVDGRVRRYDLR--MGQLQVDYIGSPI 194
Query: 632 RALCFSRDGNILASSGQDCSVKLWD 656
+CFSRDG SS D +V+L D
Sbjct: 195 TCVCFSRDGQCTLSSSLDSTVRLLD 219
Score = 157 (60.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 71/282 (25%), Positives = 113/282 (40%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKS--------SDQLQDIEMECD--- 438
V + D + L S+ +KLWS+ L S +D D C
Sbjct: 28 VRAVRFNADGNYLLTCGSDKSLKLWSVSRGTLLKTYSGHGYEVLDADGSYDNSQLCSCSS 87
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRC--LV 496
D V + D + + TR L GH G V + F+ + +++LS S D T+R W R +
Sbjct: 88 DKTVILWDVASGQVTRKLRGHAGKVNCVQFNEEATVMLSGSIDGTVRCWDTRSRRMEPIQ 147
Query: 497 VYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRL-FVGHYSDVDCVQFHPN 555
+ + +K S H S D R + L++ ++G S + CV F +
Sbjct: 148 ILDESQDGISSLKVSEHELLTGSV--DGRVRRYDL-RMGQLQVDYIG--SPITCVCFSRD 202
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGR--FLASAGGDGNVHMW 613
+ S D T+RL D TG + +GH Y L + + + S DG+V+ W
Sbjct: 203 GQCTLSSSLDSTVRLLDKSTGEMLGEYSGHVNKGYKLDCCLTDKDTHVLSCSEDGHVYYW 262
Query: 614 DLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
DL VV++L F L +S + V++W
Sbjct: 263 DLVEGSLTLKLPVGKAVVQSLSFHPTEPRLLTS-MEGRVQVW 303
Score = 119 (46.9 bits), Expect = 0.00040, P = 0.00040
Identities = 44/196 (22%), Positives = 86/196 (43%)
Query: 389 QVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQD----IEMECDDILVRI 444
+V C + +E+ +++ G + ++ W ++++ ++ D+ QD +++ ++L
Sbjct: 111 KVNCVQFNEEATVMLSGSIDGTVRCWDTRSRRMEPIQILDESQDGISSLKVSEHELLTGS 170
Query: 445 MDER----NAETTRTLVGHEG-PVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYK 499
+D R + + V + G P+ + FS D LS S D+T+RL L Y
Sbjct: 171 VDGRVRRYDLRMGQLQVDYIGSPITCVCFSRDGQCTLSSSLDSTVRLLDKSTGEMLGEYS 230
Query: 500 GH---GHPVWDIKFSPHGYYFASAGHDRMARLW-ATDSYHPLRLFVGHYSDVDCVQFHPN 555
GH G+ + D + + S D W + L+L VG + V + FHP
Sbjct: 231 GHVNKGYKL-DCCLTDKDTHVLSCSEDGHVYYWDLVEGSLTLKLPVGK-AVVQSLSFHPT 288
Query: 556 SNYVATGSSDRTIRLW 571
+ T R +++W
Sbjct: 289 EPRLLTSMEGR-VQVW 303
>UNIPROTKB|E2RRL3 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 CTD:84292 KO:K13124
OMA:CKQGAVR EMBL:AAEX03012407 RefSeq:XP_542047.1
ProteinModelPortal:E2RRL3 Ensembl:ENSCAFT00000027316 GeneID:484931
KEGG:cfa:484931 NextBio:20858998 Uniprot:E2RRL3
Length = 315
Score = 243 (90.6 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 64/203 (31%), Positives = 91/203 (44%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
+TL +G VR + F+ D + L+C D T++LW+ L L Y GHG+ V D S
Sbjct: 19 KTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFD 78
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
S G D+ LW S +R F GH V+ VQF+ + + +GS D +IR WDC
Sbjct: 79 NSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDC 138
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRA 633
+ + T +A S V + S DG V +DL +
Sbjct: 139 RSRRPEPVQTLDEARDGISSVKVSDHEVLSGSVDGRVRRYDLR--MGQLFSDYVGSPITC 196
Query: 634 LCFSRDGNILASSGQDCSVKLWD 656
CFSRDG S D +++L D
Sbjct: 197 TCFSRDGQCTLVSSLDSTLRLLD 219
>RGD|1306947 [details] [associations]
symbol:Wdr83 "WD repeat domain 83" species:10116 "Rattus
norvegicus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306947 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013
GO:GO:0000375 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V EMBL:AY940050 IPI:IPI00209921
RefSeq:NP_001041312.1 UniGene:Rn.3570 ProteinModelPortal:Q5BLX8
PRIDE:Q5BLX8 GeneID:288924 KEGG:rno:288924 InParanoid:Q5BLX8
NextBio:629000 Genevestigator:Q5BLX8 Uniprot:Q5BLX8
Length = 315
Score = 243 (90.6 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 61/203 (30%), Positives = 92/203 (45%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
+TL +G VR + F+ D + L+C D T++LW+ L L Y GHG+ V D S
Sbjct: 19 KTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFD 78
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
+ S G D+ LW + +R F GH V+ VQF+ + + +GS D ++R WDC
Sbjct: 79 NSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDC 138
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRA 633
+ + T +A S V + + DG V +DL +
Sbjct: 139 RSRKPEPVQTLDEARDGISSVKVSDHEILAGSVDGRVRRYDLR--MGQVTSDYVGSPITC 196
Query: 634 LCFSRDGNILASSGQDCSVKLWD 656
CFSRDG S D +++L D
Sbjct: 197 TCFSRDGQCTLISSLDSTLRLLD 219
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 266 (98.7 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 61/202 (30%), Positives = 100/202 (49%)
Query: 463 VRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGH 522
+R + FSPD + L + ++D T+++W + + + GH ++ + +S G + S
Sbjct: 330 IRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSG 389
Query: 523 DRMARLWATD----SYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH 578
D+ A++W + ++ VG + V V P+ VA GS D +RLWD TG
Sbjct: 390 DKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYF 449
Query: 579 VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXX----DVVRAL 634
+ GH VY+++FS G+ LAS D ++ +WDLS D V ++
Sbjct: 450 LERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSV 509
Query: 635 CFSRDGNILASSGQDCSVKLWD 656
FS DG+ L S +D SV+ WD
Sbjct: 510 AFSPDGSWLISGSKDRSVQFWD 531
Score = 238 (88.8 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 63/232 (27%), Positives = 103/232 (44%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
+D V++ D + T GHE + L +S D ++S S D ++W + +C
Sbjct: 347 EDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFT 406
Query: 498 YK----GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFH 553
G + V + SP G A+ D + RLW + + L + GH V V F
Sbjct: 407 LGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFS 466
Query: 554 PNSNYVATGSSDRTIRLWDCVTGSHVR-----LLTGHKAPVYALSFSVCGRFLASAGGDG 608
P+ +A+GS D++++LWD ++GS R GHK V +++FS G +L S D
Sbjct: 467 PDGKSLASGSLDKSLKLWD-LSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDR 525
Query: 609 NVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGN---ILASSGQDCSVKLWDF 657
+V WD N + V ++ S N + A+ D +LW +
Sbjct: 526 SVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLWKY 577
Score = 223 (83.6 bits), Expect = 9.5e-15, Sum P(2) = 9.5e-15
Identities = 69/240 (28%), Positives = 108/240 (45%)
Query: 396 SEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQ--DIEMECD---------DILVRI 444
S D + LA G + +K+W + +K++ +L ++ D D +I
Sbjct: 336 SPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKI 395
Query: 445 MDERNAETTRTLVGHE-GP---VRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKG 500
D + TL E GP V ++ SPD L+ + S DN +RLW L Y+G
Sbjct: 396 WDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEG 455
Query: 501 HGHPVWDIKFSPHGYYFASAGHDRMARLW---ATDSYHPLRL-FVGHYSDVDCVQFHPNS 556
H V+ + FSP G AS D+ +LW + S R F GH V V F P+
Sbjct: 456 HLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDG 515
Query: 557 NYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGR---FLASAGGDGNVHMW 613
+++ +GS DR+++ WD G+ +L GHK V +++ S A+ GD +W
Sbjct: 516 SWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLW 575
Score = 208 (78.3 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 51/165 (30%), Positives = 80/165 (48%)
Query: 501 HGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYS-DVDC----VQFHPN 555
H V + FS G Y A+ G +R A+++ D+ + FV D D V F P+
Sbjct: 280 HNSVVCCVNFSNDGKYLAT-GCNRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPD 338
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
NY+ATG+ D+T+++WD T GH+ +Y+L +S GRF+ S GD +WD+
Sbjct: 339 GNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDI 398
Query: 616 SNXXXXXXXXXXX----DVVRALCFSRDGNILASSGQDCSVKLWD 656
+ V ++ S DG ++A+ D V+LWD
Sbjct: 399 EKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWD 443
Score = 199 (75.1 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 45/153 (29%), Positives = 70/153 (45%)
Query: 510 FSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIR 569
FSP G Y A+ D+ ++W + F GH D+ + + + ++ +GS D+ +
Sbjct: 335 FSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAK 394
Query: 570 LWDCVTGSHVRLL----TGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXX 625
+WD G L G K V +++ S GR +A+ D V +WD
Sbjct: 395 IWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYE 454
Query: 626 XXXDVVRALCFSRDGNILASSGQDCSVKLWDFA 658
D V ++ FS DG LAS D S+KLWD +
Sbjct: 455 GHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLS 487
Score = 140 (54.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 40/134 (29%), Positives = 59/134 (44%)
Query: 543 HYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHK---APVYALS--FSVC 597
H S V CV F + Y+ATG + R+ +++D TG V +Y S FS
Sbjct: 280 HNSVVCCVNFSNDGKYLATGCN-RSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPD 338
Query: 598 GRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDF 657
G +LA+ D V +WD+ + +L +S DG + S D K+WD
Sbjct: 339 GNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDI 398
Query: 658 --AKLSDEVGTEEV 669
K + +G EEV
Sbjct: 399 EKGKCAFTLGNEEV 412
Score = 43 (20.2 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 205 HYQEDLRKLSSVTKRDQIRTNE----IAETFRS 233
HY+E++R+L ++ I ++ TFRS
Sbjct: 67 HYEEEIRQLKRQLEQQNINASQRDLNSPSTFRS 99
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 265 (98.3 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 67/226 (29%), Positives = 107/226 (47%)
Query: 401 ILAVGFSESYIKLWSLVPQKLKAMKS-SDQLQDIEMECDDILV---------RIMDERNA 450
+LA G + + +WS+ + + + ++ +++ + L+ R+ D A
Sbjct: 35 LLATGGDDCRVNVWSVAQLRHDLLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAA 94
Query: 451 ETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKF 510
+ RTL+GH+ + L F P S + S S D I+LW + C+ YK H V ++F
Sbjct: 95 KILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRF 154
Query: 511 SPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV-ATGSSDRTIR 569
SP G + ASA D +LW + + F GHY V+ V+FHP+ Y+ A+GSS TIR
Sbjct: 155 SPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIR 214
Query: 570 LWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDG-NVHMWD 614
WD V + PV + F+ G L D V+ W+
Sbjct: 215 FWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGWE 260
Score = 254 (94.5 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 63/225 (28%), Positives = 100/225 (44%)
Query: 456 LVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGY 515
L GH P+ L S L+++ SQ +IR+W L + L GH + + F P+G
Sbjct: 58 LTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGS 117
Query: 516 YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT 575
+ AS D +LW + + H V C++F P+ ++A+ + D T++LWD
Sbjct: 118 FVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 177
Query: 576 GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDG-NVHMWDLSNXXXXXXXXXXXDVVRAL 634
G + TGH PV + F +L ++G + WDL VR +
Sbjct: 178 GKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCI 237
Query: 635 CFSRDGNILASSGQDCSVKL--WDFAKLSDEVGTEEVNLSHSADI 677
F+ DG L QD S+++ W+ + D V VN AD+
Sbjct: 238 LFNPDGCCLYGGFQD-SLRVYGWEPERCFDVV---VVNWGKVADL 278
Score = 210 (79.0 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 46/143 (32%), Positives = 66/143 (46%)
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
G A+ G D +W+ L GH + ++ +Q + GS +IR+WD
Sbjct: 33 GRLLATGGDDCRVNVWSVAQLRH-DLLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDL 91
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRA 633
+R L GHKA + +L F G F+AS D ++ +WD+ VR
Sbjct: 92 EAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRC 151
Query: 634 LCFSRDGNILASSGQDCSVKLWD 656
L FS DG LAS+ D +VKLWD
Sbjct: 152 LRFSPDGKWLASAADDHTVKLWD 174
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 265 (98.3 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 66/243 (27%), Positives = 105/243 (43%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
DD V + +L GH P+ L S L+++ SQ +IR+W L + L
Sbjct: 41 DDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRT 100
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
GH + + F P+G + AS D +LW + + H V C++F P+
Sbjct: 101 LLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGK 160
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDG-NVHMWDLS 616
++A+ + D T++LWD G + TGH PV + F +L ++G + WDL
Sbjct: 161 WLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLE 220
Query: 617 NXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKL--WDFAKLSDEVGTEEVNLSHS 674
VR + F+ DG L QD S+++ W+ + D V VN
Sbjct: 221 KFHVVSCIEEEATPVRCILFNPDGCCLYGGFQD-SLRVYGWEPERCFDVV---VVNWGKV 276
Query: 675 ADI 677
AD+
Sbjct: 277 ADL 279
Score = 226 (84.6 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 56/214 (26%), Positives = 92/214 (42%)
Query: 448 RNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNT-IRLWSLLLWRCLVVYKGHGHPVW 506
+ A + +V H V L LL+ D+ + +WS+ C++ GH P+
Sbjct: 8 KTAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIE 67
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
++ S + R+W ++ LR +GH +++ + FHP ++VA+GS D
Sbjct: 68 SLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDT 127
Query: 567 TIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXX 626
I+LWD + H V L FS G++LASA D V +WDL+
Sbjct: 128 DIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTG 187
Query: 627 XXDVVRALCFSRDGN-ILASSGQDCSVKLWDFAK 659
V + F +LAS +++ WD K
Sbjct: 188 HYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEK 221
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 242 (90.2 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 62/213 (29%), Positives = 93/213 (43%)
Query: 447 ERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVW 506
E N +R L GH G + F D ++ S S D T LW + + V + GH V
Sbjct: 86 EGNVRVSRELPGHTGYLSCCRFLDDNQIITS-SGDTTCALWDIETGQQTVGFAGHSGDVM 144
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
+ +P G F S D +LW + F+GH SD++ V F PN TGS D
Sbjct: 145 SLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDA 204
Query: 567 TIRLWDCVTGSHVRLLTGHK---APVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXX 623
T RL+D + L+ H + +++FS GR L + D N ++WD
Sbjct: 205 TCRLFDLRADQEL-LMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGV 263
Query: 624 XXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ V L + DG +A+ D +K+W+
Sbjct: 264 LAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 296
Score = 206 (77.6 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 56/214 (26%), Positives = 90/214 (42%)
Query: 452 TTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPV---WDI 508
T RTL GH + + + D LL+S SQD L++W K H P+ W +
Sbjct: 3 TRRTLRGHLAKIYAMHWGTDSRLLVSASQDG-----KLIIWDSYTTNKVHAIPLRSSWVM 57
Query: 509 K--FSPHGYYFASAGHDRMARLWATDS----YHPLRLFVGHYSDVDCVQFHPNSNYVATG 562
++P G + A G D + +++ + R GH + C +F + N + T
Sbjct: 58 TCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFL-DDNQIITS 116
Query: 563 SSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXX 622
S D T LWD TG GH V +LS + GR S D ++ +WD+ +
Sbjct: 117 SGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQ 176
Query: 623 XXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ A+ F +G + D + +L+D
Sbjct: 177 TFIGHESDINAVAFFPNGYAFTTGSDDATCRLFD 210
Score = 184 (69.8 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 54/231 (23%), Positives = 94/231 (40%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEM--ECDDILVRIMDE 447
V C + SI ++ E +++ +P + L D ++ D + D
Sbjct: 68 VACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDI 127
Query: 448 RNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWD 507
+ T GH G V LS +PD +S + D +I+LW + C + GH +
Sbjct: 128 ETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINA 187
Query: 508 IKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC----VQFHPNSNYVATGS 563
+ F P+GY F + D RL+ + L ++ H ++ C V F + + G
Sbjct: 188 VAFFPNGYAFTTGSDDATCRLFDLRADQELLMY-SH-DNIICGITSVAFSRSGRLLLAGY 245
Query: 564 SDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
D +WD + G +L GH V L + G +A+ D + +W+
Sbjct: 246 DDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 296
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 50/210 (23%), Positives = 85/210 (40%)
Query: 463 VRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLV-VYK---GHGHPVWDIKFSPHGYYFA 518
V +++P + + DN ++SL V V + GH + +F
Sbjct: 56 VMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIIT 115
Query: 519 SAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH 578
S+G D LW ++ F GH DV + P+ +G+ D +I+LWD V S
Sbjct: 116 SSG-DTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD-VRDSM 173
Query: 579 VR-LLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDV--VRALC 635
R GH++ + A++F G + D ++DL + + ++
Sbjct: 174 CRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVA 233
Query: 636 FSRDGNILASSGQDCSVKLWDFAKLSDEVG 665
FSR G +L + D + +WD K D G
Sbjct: 234 FSRSGRLLLAGYDDFNCNIWDAMK-GDRAG 262
>SGD|S000004722 [details] [associations]
symbol:ASC1 "G-protein beta subunit and guanine nucleotide
dissociation inhibitor" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004871 "signal
transducer activity" evidence=IMP;IPI] [GO:0001403 "invasive growth
in response to glucose limitation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0017148
"negative regulation of translation" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IMP;IPI]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IPI]
[GO:0005092 "GDP-dissociation inhibitor activity" evidence=IDA]
[GO:0010255 "glucose mediated signaling pathway" evidence=IMP;IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004722 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 EMBL:BK006946 GO:GO:0004871
GO:GO:0001403 EMBL:Z49702 GO:GO:0022627 GO:GO:0010255
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 GO:GO:0005092 OrthoDB:EOG437VPP
PIR:S54578 RefSeq:NP_013834.1 PDB:1TRJ PDB:3FRX PDB:3IZB PDB:3O2Z
PDB:3O30 PDB:3RFG PDB:3RFH PDB:3U5C PDB:3U5G PDBsum:1TRJ
PDBsum:3FRX PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3RFG
PDBsum:3RFH PDBsum:3U5C PDBsum:3U5G ProteinModelPortal:P38011
SMR:P38011 DIP:DIP-6465N IntAct:P38011 MINT:MINT-652105
STRING:P38011 UCD-2DPAGE:P38011 PaxDb:P38011 PeptideAtlas:P38011
EnsemblFungi:YMR116C GeneID:855143 KEGG:sce:YMR116C
EvolutionaryTrace:P38011 NextBio:978537 Genevestigator:P38011
GermOnline:YMR116C Uniprot:P38011
Length = 319
Score = 242 (90.2 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 69/216 (31%), Positives = 101/216 (46%)
Query: 455 TLVGHEGPVRKLSFSPDR-SLLLSCSQDNTIRLWSLL----LWRCLV-VYKGHGHPVWDI 508
TL GH G V L+ S + +LLLS S+D T+ W L + V +KGH H V D
Sbjct: 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDC 71
Query: 509 KFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTI 568
+ G Y SA D+ RLW + + FVGH SDV V ++ + +GS D+TI
Sbjct: 72 TLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTI 131
Query: 569 RLWDCVTGSHVRLLTGHKAPVYALSFSVCGRF------LASAGGDGNVHMWDLSNXXXXX 622
++W + G + L GH V + + + SAG D V W+L+
Sbjct: 132 KVWT-IKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEA 190
Query: 623 XXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFA 658
+ L S DG ++AS+G+D + LW+ A
Sbjct: 191 DFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLA 226
Score = 193 (73.0 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 47/176 (26%), Positives = 85/176 (48%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +R+ D ET + VGH+ V + S+++S S+D TI++W++ +CL
Sbjct: 86 DKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATL 144
Query: 499 KGHGHPVWDIKFSPH------GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQF 552
GH V ++ P+ SAG+D+M + W + + F+GH S+++ +
Sbjct: 145 LGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTA 204
Query: 553 HPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDG 608
P+ +A+ D I LW+ + L+ V++L+FS +LA+A G
Sbjct: 205 SPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDE-VFSLAFSPNRYWLAAATATG 259
Score = 180 (68.4 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 61/247 (24%), Positives = 104/247 (42%)
Query: 446 DERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPV 505
D++ R+ GH V+ + + D + LS S D T+RLW + + GH V
Sbjct: 51 DQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDV 110
Query: 506 WDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPN------SNYV 559
+ S D+ ++W T L +GH V V+ PN S +
Sbjct: 111 MSVDIDKKASMIISGSRDKTIKVW-TIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTI 169
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXX 619
+ +D+ ++ W+ GH + + L+ S G +ASAG DG + +W+L+
Sbjct: 170 ISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLA-AK 228
Query: 620 XXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW--DFAKLSDEVGTEEVNLSHSADI 677
D V +L FS + LA++ +K++ D L D++ E S +A+
Sbjct: 229 KAMYTLSAQDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEP 287
Query: 678 KNSSLAY 684
SLA+
Sbjct: 288 HAVSLAW 294
Score = 128 (50.1 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 46/215 (21%), Positives = 94/215 (43%)
Query: 387 RQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKS-SDQLQDIEM----ECDDIL 441
+ V +I + S++ G + IK+W++ Q L + +D + + + + DD
Sbjct: 107 KSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDS 166
Query: 442 VRIMDERNAETTRT-----------LVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL 490
V I+ N + + +GH + L+ SPD +L+ S +D I LW+L
Sbjct: 167 VTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLA 226
Query: 491 LWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYH---PLRL-FVGHYSD 546
+ + V+ + FSP+ Y+ A+A + ++++ D + LR F G+
Sbjct: 227 AKKAMYTLSAQDE-VFSLAFSPNRYWLAAATATGI-KVFSLDPQYLVDDLRPEFAGYSKA 284
Query: 547 VD----CVQFHPNSNYVATGSSDRTIRLWDCVTGS 577
+ + + + + G +D IR+W +T +
Sbjct: 285 AEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTAN 319
>UNIPROTKB|B3KPU1 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246 EMBL:AC009488
HOGENOM:HOG000176356 HOVERGEN:HBG000188 UniGene:Hs.185172
HGNC:HGNC:4398 EMBL:AK056750 IPI:IPI00924758 SMR:B3KPU1
STRING:B3KPU1 Ensembl:ENST00000419828 Ensembl:ENST00000427895
Uniprot:B3KPU1
Length = 240
Score = 242 (90.2 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 62/213 (29%), Positives = 93/213 (43%)
Query: 447 ERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVW 506
E N +R L GH G + F D ++ S S D T LW + + V + GH V
Sbjct: 30 EGNVRVSRELPGHTGYLSCCRFLDDNQIITS-SGDTTCALWDIETGQQTVGFAGHSGDVM 88
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
+ +P G F S D +LW + F+GH SD++ V F PN TGS D
Sbjct: 89 SLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDA 148
Query: 567 TIRLWDCVTGSHVRLLTGHK---APVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXX 623
T RL+D + L+ H + +++FS GR L + D N ++WD
Sbjct: 149 TCRLFDLRADQEL-LMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGV 207
Query: 624 XXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ V L + DG +A+ D +K+W+
Sbjct: 208 LAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 240
Score = 184 (69.8 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 54/231 (23%), Positives = 94/231 (40%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEM--ECDDILVRIMDE 447
V C + SI ++ E +++ +P + L D ++ D + D
Sbjct: 12 VACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDI 71
Query: 448 RNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWD 507
+ T GH G V LS +PD +S + D +I+LW + C + GH +
Sbjct: 72 ETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINA 131
Query: 508 IKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC----VQFHPNSNYVATGS 563
+ F P+GY F + D RL+ + L ++ H ++ C V F + + G
Sbjct: 132 VAFFPNGYAFTTGSDDATCRLFDLRADQELLMY-SH-DNIICGITSVAFSRSGRLLLAGY 189
Query: 564 SDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
D +WD + G +L GH V L + G +A+ D + +W+
Sbjct: 190 DDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 240
Score = 140 (54.3 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 42/169 (24%), Positives = 69/169 (40%)
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + +F S+G D LW ++ F GH DV + P+
Sbjct: 41 GHTGYLSCCRFLDDNQIITSSG-DTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTF 99
Query: 560 ATGSSDRTIRLWDCVTGSHVR-LLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNX 618
+G+ D +I+LWD V S R GH++ + A++F G + D ++DL
Sbjct: 100 VSGACDASIKLWD-VRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRAD 158
Query: 619 XXXXXXXXXXDV--VRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVG 665
+ + ++ FSR G +L + D + +WD K D G
Sbjct: 159 QELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMK-GDRAG 206
Score = 113 (44.8 bits), Expect = 0.00099, P = 0.00099
Identities = 35/142 (24%), Positives = 60/142 (42%)
Query: 552 FHPNSNYVATGSSDRTIRLWDCVTGS-HVRL---LTGHKAPVYALSFSVCGRFLASAGGD 607
+ P+ N+VA G D ++ T +VR+ L GH + F + + S+G D
Sbjct: 5 YAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-D 63
Query: 608 GNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTE 667
+WD+ V +L + DG S D S+KLWD + D +
Sbjct: 64 TTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD---VRDSM-CR 119
Query: 668 EVNLSHSADIKNSSLAYLVRSY 689
+ + H +DI +++A+ Y
Sbjct: 120 QTFIGHESDI--NAVAFFPNGY 139
>UNIPROTKB|Q9BRX9 [details] [associations]
symbol:WDR83 "WD repeat domain-containing protein 83"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA] [GO:0000375 "RNA
splicing, via transesterification reactions" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471106 GO:GO:0000398 GO:GO:0071013 UniGene:Hs.657204
HOGENOM:HOG000091642 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V OMA:CKQGAVR EMBL:AK223195 EMBL:AK314164
EMBL:BC005870 IPI:IPI00031581 RefSeq:NP_001093207.1
RefSeq:NP_115708.1 ProteinModelPortal:Q9BRX9 SMR:Q9BRX9
STRING:Q9BRX9 PhosphoSite:Q9BRX9 DMDM:74761224 PRIDE:Q9BRX9
DNASU:84292 Ensembl:ENST00000242796 Ensembl:ENST00000418543
GeneID:84292 KEGG:hsa:84292 UCSC:uc002mue.4 GeneCards:GC19P012777
HGNC:HGNC:32672 HPA:HPA042629 HPA:HPA042838 neXtProt:NX_Q9BRX9
PharmGKB:PA165394765 InParanoid:Q9BRX9 PhylomeDB:Q9BRX9
ChiTaRS:WDR83 GenomeRNAi:84292 NextBio:73931 ArrayExpress:Q9BRX9
Bgee:Q9BRX9 Genevestigator:Q9BRX9 GermOnline:ENSG00000123154
Uniprot:Q9BRX9
Length = 315
Score = 242 (90.2 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 63/203 (31%), Positives = 91/203 (44%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
+TL +G VR + F+ D + L+C D T++LW+ L L Y GHG+ V D S
Sbjct: 19 KTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFD 78
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
S G D+ LW S +R F GH V+ VQF+ + + +GS D +IR WDC
Sbjct: 79 NSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDC 138
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRA 633
+ + T +A S V + + DG V +DL +
Sbjct: 139 RSRRPEPVQTLDEARDGVSSVKVSDHEILAGSVDGRVRRYDLR--MGQLFSDYVGSPITC 196
Query: 634 LCFSRDGNILASSGQDCSVKLWD 656
CFSRDG S D +++L D
Sbjct: 197 TCFSRDGQCTLVSSLDSTLRLLD 219
Score = 143 (55.4 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 59/222 (26%), Positives = 86/222 (38%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D V + D + + R GH G V + F+ + +++LS S D++IR W R V
Sbjct: 88 DKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDCRSRRPEPVQ 147
Query: 499 K-GHGHP-VWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNS 556
V +K S H S D R + +VG S + C F +
Sbjct: 148 TLDEARDGVSSVKVSDHEILAGSV--DGRVRRYDLRMGQLFSDYVG--SPITCTCFSRDG 203
Query: 557 NYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGR--FLASAGGDGNVHMWD 614
S D T+RL D TG + GHK Y L + R + S DG V WD
Sbjct: 204 QCTLVSSLDSTLRLLDKDTGELLGEYKGHKNQEYKLDCCLSERDTHVVSCSEDGKVFFWD 263
Query: 615 LSNXXXXXXXXXXXDVVRALCFS-RDGNILASSGQDCSVKLW 655
L VV++L + + +L + G SV+ W
Sbjct: 264 LVEGALALALPVGSGVVQSLAYHPTEPCLLTAMGG--SVQCW 303
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 265 (98.3 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 61/174 (35%), Positives = 90/174 (51%)
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGH 501
+R+ D A+ RTL+GH+ + L F P L S S D+ I+LW + C+ YKGH
Sbjct: 87 LRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGH 146
Query: 502 GHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVAT 561
V + FSP G + ASA D +LW + + F H S V+ VQFHPN +A+
Sbjct: 147 TQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLAS 206
Query: 562 GSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDG-NVHMWD 614
GS+DRT++LWD + + G V ++ F+ G L S + V+ W+
Sbjct: 207 GSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSENTLRVYGWE 260
Score = 264 (98.0 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 64/214 (29%), Positives = 96/214 (44%)
Query: 456 LVGHEGPVRKLSFSPDRSLLLSCS-QDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG 514
+V H V L LL+ +D + +W++ C++ GH V I+F+
Sbjct: 16 IVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSE 75
Query: 515 YYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCV 574
+ RLW ++ LR +GH + + + FHP Y+A+GS D I+LWD
Sbjct: 76 ERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVR 135
Query: 575 TGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRAL 634
V GH V L+FS G++LASA D V +WDL V +
Sbjct: 136 RKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVV 195
Query: 635 CFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEE 668
F + +LAS D +VKLWD K + +G+ E
Sbjct: 196 QFHPNEYLLASGSADRTVKLWDLEKFN-MIGSSE 228
Score = 188 (71.2 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 61/229 (26%), Positives = 99/229 (43%)
Query: 367 RVTLGPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKL----- 421
RV + S P+ +L V C + + + G ++LW L K+
Sbjct: 44 RVNIWAVSKPN-CIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLM 102
Query: 422 --KAMKSSDQLQDI-EMECD---DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLL 475
KA SS + E D +++ D R GH VR L+FSPD L
Sbjct: 103 GHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWL 162
Query: 476 LSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYH 535
S S D+T++LW L+ + + + H V ++F P+ Y AS DR +LW + ++
Sbjct: 163 ASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFN 222
Query: 536 PLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRL--WD---CVTGSHV 579
+ G V V F+P+ + + +GS + T+R+ W+ C HV
Sbjct: 223 MIGSSEGETGVVRSVLFNPDGSCLYSGS-ENTLRVYGWEPDRCFDVVHV 270
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 267 (99.0 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 89/265 (33%), Positives = 119/265 (44%)
Query: 351 DSEKIDKLK-ALREATKRVTLGPESLPSIACYTLLNARQQVTC-AEISEDVSILAVGFSE 408
DS D L A R K + E+ I C L+ A Q + SED+ +
Sbjct: 628 DSLLADFLHDAKRFVLKNCQVADEAPLQIYCAGLVFAPQTALIRSNFSEDLPSWICQLPK 687
Query: 409 SYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSF 468
K W Q L+ S+ + DD VR+ D +TL GH G V ++F
Sbjct: 688 VNEK-WGAELQTLEG-HSNSVWAVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAF 745
Query: 469 SPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARL 528
SPD LL S S D T+RLW +GH + V + FSP G AS D+ RL
Sbjct: 746 SPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRL 805
Query: 529 W--ATDSYHP-LRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH 585
W AT S LR GH V V F P+ +A+GS D+T+RLWD TG+ + L
Sbjct: 806 WDPATGSLQQTLR---GHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGTLQQTLI-I 861
Query: 586 KAPVYALSFSVCGRFLASAGGDGNV 610
K V L FS G ++++ G N+
Sbjct: 862 KGTVTELQFSQDGSYISTNLGSLNI 886
Score = 262 (97.3 bits), Expect = 6.6e-19, P = 6.6e-19
Identities = 112/386 (29%), Positives = 173/386 (44%)
Query: 365 TKRVTLGPESL-----PSI--AC-YTLLNARQ-QVTCAEISEDVSILAVGFSESYIKLWS 415
T+R + P+ + P + +C Y + + ++ QV+ +EI EDV + +++
Sbjct: 542 TRRADINPQDIRQYLPPELRYSCRYWIHHLKESQVSSSEI-EDVRLFLQKHFLHWVEAMC 600
Query: 416 LVPQKLKAMKSSDQLQ-DIEMEC----DDILVRIM-DERNAETTRTLVGHEGPVR----K 465
L+ + + D L DI + D +L + D + V E P++
Sbjct: 601 LLGLISEVVGMLDLLHTDILVSNIGNNDSLLADFLHDAKRFVLKNCQVADEAPLQIYCAG 660
Query: 466 LSFSPDRSLLLS-CSQDNTIRLWSLLL------WRC-LVVYKGHGHPVWDIKFSPHGYYF 517
L F+P +L+ S S+D + W L W L +GH + VW +
Sbjct: 661 LVFAPQTALIRSNFSED--LPSWICQLPKVNEKWGAELQTLEGHSNSVWAV--------L 710
Query: 518 ASAGHDRMARLW--ATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT 575
AS D RLW AT S + GH V V F P+ +A+GS D+T+RLWD T
Sbjct: 711 ASGSDDETVRLWDPATGSLQ--QTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPAT 768
Query: 576 GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALC 635
GS + L GH V +++FS GR LAS D V +WD + D VR++
Sbjct: 769 GSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVA 828
Query: 636 FSRDGNILASSGQDCSVKLWDFAK--LSDEV---GT-EEVNLSHSADIKNSSLAYL-VRS 688
FS DG +LAS D +V+LWD A L + GT E+ S +++L L ++S
Sbjct: 829 FSPDGRLLASGSFDKTVRLWDPATGTLQQTLIIKGTVTELQFSQDGSYISTNLGSLNIQS 888
Query: 689 Y---KTKASPLLHLIFSRRNILLRGP 711
+SP +H +IL+ GP
Sbjct: 889 RCGNNLSSSPKMH-----SDILINGP 909
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 240 (89.5 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 68/238 (28%), Positives = 106/238 (44%)
Query: 446 DERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPV 505
D+ R L GH V + S D LS S D +RLW L + GH V
Sbjct: 49 DKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDV 108
Query: 506 WDIKFSPHGYYFASAGHDRMARLWAT--DSYHPLRLFVGHYSDVDCVQFHPNSNY--VAT 561
+ FS SA DR +LW T + + + GH V CV+F PN+ + +
Sbjct: 109 LSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVS 168
Query: 562 GSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXX 621
S D+T+++W+ L GH + ++ S G AS G DG + +WDL+
Sbjct: 169 ASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKL 228
Query: 622 XXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKN 679
++ +LCFS + L ++ ++ S+++WD S V +V+L A+ KN
Sbjct: 229 YSLEAGS-IIHSLCFSPNRYWLCAATEN-SIRIWDLESKS-VVEDLKVDLKSEAE-KN 282
Score = 226 (84.6 bits), Expect = 4.9e-17, Sum P(2) = 4.9e-17
Identities = 55/181 (30%), Positives = 88/181 (48%)
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRC-LVVYKG 500
+R+ D ETTR VGH V ++FS D ++S S+D TI+LW+ L C + +G
Sbjct: 87 LRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTL-GECKYTISEG 145
Query: 501 HGHPVWD--IKFSPHGYY--FASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNS 556
GH W ++FSP+ SA D+ ++W + VGH ++ V P+
Sbjct: 146 DGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDG 205
Query: 557 NYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLS 616
+ A+G D I LWD G + L +++L FS R+ A + ++ +WDL
Sbjct: 206 SLCASGGKDGVILLWDLAEGKKLYSLEAGSI-IHSLCFSP-NRYWLCAATENSIRIWDLE 263
Query: 617 N 617
+
Sbjct: 264 S 264
Score = 217 (81.4 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 66/226 (29%), Positives = 100/226 (44%)
Query: 459 HEGPVRKLSFSPDRS-LLLSCSQDNTIRLWSLLLW-RCLVVYK----GHGHPVWDIKFSP 512
H V ++ D S ++++ S+D +I LW L + V + GH H V D+ S
Sbjct: 14 HTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSS 73
Query: 513 HGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWD 572
G + S D RLW + R FVGH DV V F ++ + + S DRTI+LW+
Sbjct: 74 DGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN 133
Query: 573 CVTGSHVRLLTG--HKAPVYALSFS--VCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXX 628
+ + G HK V + FS + SA D V +W+L N
Sbjct: 134 TLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHS 193
Query: 629 DVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHS 674
+ + S DG++ AS G+D + LWD A+ E ++ HS
Sbjct: 194 GYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHS 239
Score = 119 (46.9 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 29/95 (30%), Positives = 50/95 (52%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D V++ + +N + +LVGH G + ++ SPD SL S +D I LW L + L
Sbjct: 172 DKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSL 231
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDS 533
+ G + + FSP+ Y+ +A + + R+W +S
Sbjct: 232 EA-GSIIHSLCFSPNRYWLCAATENSI-RIWDLES 264
Score = 42 (19.8 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 583 TGH-KAPVY--ALSFSVCGRFLASAGGDGNVHMWDL 615
TG+ K +Y +L++S G L S DG V +W +
Sbjct: 288 TGNQKKVIYCTSLNWSADGSTLFSGYTDGVVRVWGI 323
Score = 40 (19.1 bits), Expect = 4.9e-17, Sum P(2) = 4.9e-17
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 633 ALCFSRDGNILASSGQDCSVKLWDFAK 659
+L +S DG+ L S D V++W +
Sbjct: 299 SLNWSADGSTLFSGYTDGVVRVWGIGR 325
>UNIPROTKB|O42249 [details] [associations]
symbol:gnb2l1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:8128 "Oreochromis niloticus" [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0030178 GO:GO:2000114
GO:GO:0051302 GO:GO:2000543 HOVERGEN:HBG000277 EMBL:AF025331
UniGene:Oni.25 ProteinModelPortal:O42249 SMR:O42249 PRIDE:O42249
Uniprot:O42249
Length = 317
Score = 240 (89.5 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 69/217 (31%), Positives = 100/217 (46%)
Query: 452 TTR-TLVGHEGPVRKLSFSPDR-SLLLSCSQDNTIRLWSLLLWRCLVVY-------KGHG 502
T R TL GH G V +++ +P ++LS S+D +I +W L R Y KGH
Sbjct: 6 TVRGTLKGHSGWVTQIATTPKYPDMILSASRDKSIIMWKLT--RDETNYGIPQRSLKGHS 63
Query: 503 HPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATG 562
H V D+ S G + S D RLW + R FVGH DV V F ++ + +G
Sbjct: 64 HFVSDVVISSDGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSG 123
Query: 563 SSDRTIRLWDCVTGSHVRLLT-GHKAPVYALSFSV--CGRFLASAGGDGNVHMWDLSNXX 619
S D+TI+LW+ + + GH V + FS + S G D V +W+L+N
Sbjct: 124 SRDKTIKLWNTLGVCKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCK 183
Query: 620 XXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ + S DG++ AS G+D LWD
Sbjct: 184 LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Score = 236 (88.1 bits), Expect = 7.0e-19, P = 7.0e-19
Identities = 74/247 (29%), Positives = 110/247 (44%)
Query: 446 DERN-AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHP 504
DE N R+L GH V + S D LS + D T+RLW L + GH
Sbjct: 48 DETNYGIPQRSLKGHSHFVSDVVISSDGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKD 107
Query: 505 VWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLF-VGHYSDVDCVQFHPNSN--YVAT 561
V + FS S D+ +LW T + GH V CV+F PNS+ + +
Sbjct: 108 VLSVAFSADNRQIVSGSRDKTIKLWNTLGVCKYTIQDEGHTEWVSCVRFSPNSSNPIIVS 167
Query: 562 GSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXX 621
D+ +++W+ GH + ++ S G AS G DG +WDL N
Sbjct: 168 CGWDKMVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL-NEGKH 226
Query: 622 XXXXXXXDVVRALCFSRDGNIL-ASSGQDCSVKLWDF-AKLS-DEVGTEEVNLSHSADIK 678
DV+ ALCFS + L A++G S+K+WD K+ DE+ E ++ + A+
Sbjct: 227 LYTLDSGDVINALCFSPNRYWLCAATGP--SIKIWDLEGKIIVDELRQEVISTNSKAEPP 284
Query: 679 N-SSLAY 684
+SLA+
Sbjct: 285 QCTSLAW 291
Score = 212 (79.7 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 56/181 (30%), Positives = 86/181 (47%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +R+ D TTR VGH V ++FS D ++S S+D TI+LW+ L C
Sbjct: 84 DGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTL-GVCKYTI 142
Query: 499 KGHGHPVWD--IKFSPHGY--YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHP 554
+ GH W ++FSP+ S G D+M ++W + +GH ++ V P
Sbjct: 143 QDEGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNTVTVSP 202
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+ + A+G D LWD G H+ L + AL FS +L +A G ++ +WD
Sbjct: 203 DGSLCASGGKDGQAMLWDLNEGKHLYTLDSGDV-INALCFSPNRYWLCAATGP-SIKIWD 260
Query: 615 L 615
L
Sbjct: 261 L 261
>UNIPROTKB|I3LI24 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway" evidence=IEA]
[GO:0051898 "negative regulation of protein kinase B signaling
cascade" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0042169 "SH2 domain binding" evidence=IEA]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=IEA] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030971 "receptor tyrosine kinase binding" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=IEA] [GO:0008200
"ion channel inhibitor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0001891 "phagocytic cup"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:2001244
GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 Ensembl:ENSSSCT00000022602
Uniprot:I3LI24
Length = 317
Score = 240 (89.5 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 66/211 (31%), Positives = 95/211 (45%)
Query: 455 TLVGHEGPVRKLSFSPD-RSLLLSCSQDNTIRLWSLLLWRCLV-----VYKGHGHPVWDI 508
TL GH G V +LS + + L LSC +D TI +W L +GH H V D+
Sbjct: 10 TLKGHNGWVTQLSAHAETQRLFLSCRRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 509 KFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTI 568
S G + S D RLW + R FVGH DV V F ++ + +GS D+TI
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 569 RLWDCVTGSHVRLLT-GHKAPVYALSFSV--CGRFLASAGGDGNVHMWDLSNXXXXXXXX 625
+LW+ + + H V + FS + S G D V++W+L+N
Sbjct: 130 KLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVNVWNLANCKLKTNHI 189
Query: 626 XXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ + S DG++ AS G+D LWD
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Score = 232 (86.7 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 74/247 (29%), Positives = 109/247 (44%)
Query: 446 DERN-AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHP 504
DE N R L GH V + S D LS S D T+RLW L + GH
Sbjct: 48 DETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKD 107
Query: 505 VWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSD-VDCVQFHPNSN--YVAT 561
V + FS S D+ +LW T + +S+ V CV+F PNS+ + +
Sbjct: 108 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 167
Query: 562 GSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXX 621
D+ + +W+ GH + ++ S G AS G DG +WDL N
Sbjct: 168 CGWDKLVNVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL-NEGKH 226
Query: 622 XXXXXXXDVVRALCFSRDGNIL-ASSGQDCSVKLWDF-AKLS-DEVGTEEVNLSHSADIK 678
D++ ALCFS + L A++G S+K+WD K+ DE+ E ++ S A+
Sbjct: 227 LYTLDGGDIINALCFSPNRYWLCAATGP--SIKIWDLEGKIIVDELKQEVISTSSKAEPP 284
Query: 679 N-SSLAY 684
+SLA+
Sbjct: 285 QCTSLAW 291
Score = 209 (78.6 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 63/230 (27%), Positives = 98/230 (42%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +R+ D TTR VGH V ++FS D ++S S+D TI+LW+ L C
Sbjct: 84 DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTV 142
Query: 499 KGHGHPVWD--IKFSPHGY--YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHP 554
+ H W ++FSP+ S G D++ +W + +GH ++ V P
Sbjct: 143 QDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVNVWNLANCKLKTNHIGHTGYLNTVTVSP 202
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+ + A+G D LWD G H+ L G + AL FS +L +A G ++ +WD
Sbjct: 203 DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI-INALCFSPNRYWLCAATGP-SIKIWD 260
Query: 615 LSNXXX---------XXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
L +L +S DG L + D V++W
Sbjct: 261 LEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVW 310
>UNIPROTKB|F1SEX9 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 KO:K13124 OMA:CKQGAVR
EMBL:CU856041 RefSeq:XP_003123369.1 Ensembl:ENSSSCT00000014996
GeneID:100519823 KEGG:ssc:100519823 Uniprot:F1SEX9
Length = 311
Score = 240 (89.5 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 62/203 (30%), Positives = 91/203 (44%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
+TL +G VR + F+ D + L+C D T++LW+ L L Y GHG+ V D S
Sbjct: 19 KTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFD 78
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
S G D+ LW S +R F GH V+ VQF+ + + +GS D ++R WDC
Sbjct: 79 NSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDC 138
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRA 633
+ + T +A S V + + DG V +DL +
Sbjct: 139 RSRKPEPVQTLDEARDGISSVKVSDHEVLAGSVDGRVRRYDLR--MGQLFSDYVGSPITC 196
Query: 634 LCFSRDGNILASSGQDCSVKLWD 656
CFSRDG S D +++L D
Sbjct: 197 TCFSRDGQCTLVSSLDSTLRLLD 219
Score = 143 (55.4 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 73/301 (24%), Positives = 113/301 (37%)
Query: 371 GPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQL 430
GPE LP TL + V + D + S+ +KLW+ + L S
Sbjct: 10 GPE-LPQKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGY 68
Query: 431 QDIEME--------CD---DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCS 479
+ ++ C D V + D + + R GH G V + F+ + +++LS S
Sbjct: 69 EVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGS 128
Query: 480 QDNTIRLWSLLLWRCLVVYK-GHGHP-VWDIKFSPHGYYFASAGHDRMARLWATDSYHPL 537
D+++R W + V + +K S H S D R +
Sbjct: 129 IDSSVRCWDCRSRKPEPVQTLDEARDGISSVKVSDHEVLAGSV--DGRVRRYDLRMGQLF 186
Query: 538 RLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVC 597
+VG S + C F + S D T+RL D TG + TGHK Y L +
Sbjct: 187 SDYVG--SPITCTCFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNQEYKLDCCLS 244
Query: 598 GR--FLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFS-RDGNILASSGQDCSVKL 654
R + S DG V WDL VV++L + + +L + G SV+
Sbjct: 245 ERDTHVVSCSEDGKVFFWDLVEGVLVLALPVGPSVVQSLAYHPTEPCLLTAMGG--SVQC 302
Query: 655 W 655
W
Sbjct: 303 W 303
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 260 (96.6 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 63/211 (29%), Positives = 97/211 (45%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLL--------SCSQDNTIRLWSLLLWRCLVVYKGHGHPV 505
RTL GH V +SF P +L L SC+ D +++LWSL + +GH V
Sbjct: 252 RTLRGHNTNVGAISFHPQATLTLEESDVNMASCAADGSVKLWSLDSDEPIADIEGHSMRV 311
Query: 506 WDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSD 565
+ + P G + + +D RLW + + GH V + FHP+ + TG D
Sbjct: 312 ARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGSLAGTGGLD 371
Query: 566 RTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXX 625
R+WD TG V L GH +Y+++FS G +A+ GD +WDL
Sbjct: 372 SFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQRRCIYTIP 431
Query: 626 XXXDVVRALCFS-RDGNILASSGQDCSVKLW 655
++V ++ F DG+ L + D + K+W
Sbjct: 432 AHQNLVSSVKFQPNDGHYLLTGAYDNTAKIW 462
Score = 221 (82.9 bits), Expect = 6.0e-15, P = 6.0e-15
Identities = 61/244 (25%), Positives = 103/244 (42%)
Query: 415 SLVPQKLKAMKSSDQLQDIEM-ECD-DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDR 472
S PQ ++ SD + M C D V++ + E + GH V ++++ P
Sbjct: 265 SFHPQATLTLEESD----VNMASCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSG 320
Query: 473 SLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATD 532
L + D++ RLW L + ++ +GH V D+ F P G + G D AR+W
Sbjct: 321 RFLGTTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLR 380
Query: 533 SYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYAL 592
+ + GH ++ + F PN +VATGS D ++WD + + H+ V ++
Sbjct: 381 TGRCVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQRRCIYTIPAHQNLVSSV 440
Query: 593 SFSVC-GRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCS 651
F G +L + D +W V + S DG ++A+ D +
Sbjct: 441 KFQPNDGHYLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGVDLSPDGQLIATCSYDRT 500
Query: 652 VKLW 655
KLW
Sbjct: 501 FKLW 504
Score = 215 (80.7 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 63/258 (24%), Positives = 106/258 (41%)
Query: 412 KLWSL---VPQKLKAMKSSDQLQDIEMECDDILVRIMDE--RNAETTRTLVGHEGPVRKL 466
+LW +P+ +K + ++ ++I I + + + RN + +G + P+
Sbjct: 163 RLWLAKYSLPRAVKRLDAARAQKEIPESTRTIKQQELHKNLRNVNNFCSQIGDDRPISYC 222
Query: 467 SFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYY--------FA 518
FSP+ LL++ S +LW + + +GH V I F P A
Sbjct: 223 QFSPNSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHPQATLTLEESDVNMA 282
Query: 519 SAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH 578
S D +LW+ DS P+ GH V V +HP+ ++ T D + RLWD
Sbjct: 283 SCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEE 342
Query: 579 VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSR 638
+ GH V+ L F G + G D +WDL + ++ FS
Sbjct: 343 ILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSP 402
Query: 639 DGNILASSGQDCSVKLWD 656
+G +A+ D + K+WD
Sbjct: 403 NGFHVATGSGDNACKVWD 420
Score = 126 (49.4 bits), Expect = 0.00016, P = 0.00016
Identities = 28/95 (29%), Positives = 44/95 (46%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSP-DRSLLLSCSQDNTIRLWSLLLWRCLVV 497
D ++ D R T+ H+ V + F P D LL+ + DNT ++W+ W L
Sbjct: 413 DNACKVWDLRQRRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPGWSPLKT 472
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATD 532
GH V + SP G A+ +DR +LW ++
Sbjct: 473 LAGHEGKVMGVDLSPDGQLIATCSYDRTFKLWMSE 507
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 260 (96.6 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 69/235 (29%), Positives = 106/235 (45%)
Query: 439 DILVRIMDERNAETT--RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLV 496
+++ +++DE + E T + +R + FSPD LL + ++D IR+W L R +
Sbjct: 232 ELVAKLIDESSNENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIK 291
Query: 497 VYKGHGHPVWDIKFSPHGYYFASAGHDRMARLW-ATDSYHPLRLFVGHYSDVDCVQFHPN 555
+ +GH ++ + F P G S DR R+W S L L + V V P+
Sbjct: 292 ILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIE--DGVTTVAVSPD 349
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVRLL-------TGHKAPVYALSFSVCGRFLASAGGDG 608
+A GS DRT+R+WD TG V L GH+ VY+++FS G +AS D
Sbjct: 350 GKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDR 409
Query: 609 NVHMWDLSNXXXXXXXXXXX-----DVVRALCFSRDGNILASSGQDCSVKLWDFA 658
V +W L D V ++C + D + S +D V WD A
Sbjct: 410 TVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQA 464
Score = 211 (79.3 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 68/240 (28%), Positives = 104/240 (43%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRC-LV 496
+D L+RI D + L GHE + L F PD L+S S D ++R+W L +C L
Sbjct: 275 EDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLT 334
Query: 497 VYKGHGHPVWDIKFSPHGYYFASAGHDRMARLW-ATDSYHPLRLFVG------HYSDVDC 549
+ G V + SP G A+ DR R+W +T + RL G H V
Sbjct: 335 LSIEDG--VTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYS 392
Query: 550 VQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLT------GHKAPVYALSFSVCGRFLAS 603
V F N +A+GS DRT++LW + G + T GHK V ++ + ++ S
Sbjct: 393 VAFSNNGEQIASGSLDRTVKLWH-LEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILS 451
Query: 604 AGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGN----ILASSGQDCSVKLWDFAK 659
D V WD ++ + V ++ S + I A+ DC ++W + K
Sbjct: 452 GSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIWKWTK 511
Score = 197 (74.4 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 49/172 (28%), Positives = 81/172 (47%)
Query: 510 FSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIR 569
FSP G A+ D++ R+W + +++ GH D+ + F P+ + + +GS DR++R
Sbjct: 263 FSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVR 322
Query: 570 LWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXX- 628
+WD T S L + V ++ S G+ +A+ D V +WD +
Sbjct: 323 IWDLRT-SQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNE 381
Query: 629 ------DVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVN-LSH 673
D V ++ FS +G +AS D +VKLW SD+ T EV + H
Sbjct: 382 NGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGH 433
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 260 (96.6 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 69/235 (29%), Positives = 106/235 (45%)
Query: 439 DILVRIMDERNAETT--RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLV 496
+++ +++DE + E T + +R + FSPD LL + ++D IR+W L R +
Sbjct: 232 ELVAKLIDESSNENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIK 291
Query: 497 VYKGHGHPVWDIKFSPHGYYFASAGHDRMARLW-ATDSYHPLRLFVGHYSDVDCVQFHPN 555
+ +GH ++ + F P G S DR R+W S L L + V V P+
Sbjct: 292 ILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIE--DGVTTVAVSPD 349
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVRLL-------TGHKAPVYALSFSVCGRFLASAGGDG 608
+A GS DRT+R+WD TG V L GH+ VY+++FS G +AS D
Sbjct: 350 GKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDR 409
Query: 609 NVHMWDLSNXXXXXXXXXXX-----DVVRALCFSRDGNILASSGQDCSVKLWDFA 658
V +W L D V ++C + D + S +D V WD A
Sbjct: 410 TVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQA 464
Score = 211 (79.3 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 68/240 (28%), Positives = 104/240 (43%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRC-LV 496
+D L+RI D + L GHE + L F PD L+S S D ++R+W L +C L
Sbjct: 275 EDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLT 334
Query: 497 VYKGHGHPVWDIKFSPHGYYFASAGHDRMARLW-ATDSYHPLRLFVG------HYSDVDC 549
+ G V + SP G A+ DR R+W +T + RL G H V
Sbjct: 335 LSIEDG--VTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYS 392
Query: 550 VQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLT------GHKAPVYALSFSVCGRFLAS 603
V F N +A+GS DRT++LW + G + T GHK V ++ + ++ S
Sbjct: 393 VAFSNNGEQIASGSLDRTVKLWH-LEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILS 451
Query: 604 AGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGN----ILASSGQDCSVKLWDFAK 659
D V WD ++ + V ++ S + I A+ DC ++W + K
Sbjct: 452 GSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIWKWTK 511
Score = 197 (74.4 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 49/172 (28%), Positives = 81/172 (47%)
Query: 510 FSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIR 569
FSP G A+ D++ R+W + +++ GH D+ + F P+ + + +GS DR++R
Sbjct: 263 FSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVR 322
Query: 570 LWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXX- 628
+WD T S L + V ++ S G+ +A+ D V +WD +
Sbjct: 323 IWDLRT-SQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNE 381
Query: 629 ------DVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVN-LSH 673
D V ++ FS +G +AS D +VKLW SD+ T EV + H
Sbjct: 382 NGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGH 433
>UNIPROTKB|P49027 [details] [associations]
symbol:RACK1A "Guanine nucleotide-binding protein subunit
beta-like protein A" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0050832 "defense response to fungus" evidence=IMP] [GO:0060267
"positive regulation of respiratory burst" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005737 GO:GO:0009507 GO:GO:0046686
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0050832 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048364 GO:GO:0004871 GO:GO:0048367
GO:GO:0022626 EMBL:AP008207 EMBL:CM000138 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM ProtClustDB:CLSN2682135 EMBL:D38231
EMBL:AP003452 EMBL:AK060428 EMBL:AK098893 EMBL:AK121587 PIR:T03764
RefSeq:NP_001043910.1 UniGene:Os.4684 ProteinModelPortal:P49027
SMR:P49027 STRING:P49027 PRIDE:P49027
EnsemblPlants:LOC_Os01g49290.1 GeneID:4324115
KEGG:dosa:Os01t0686800-02 KEGG:osa:4324115 Gramene:P49027
GO:GO:0060267 Uniprot:P49027
Length = 334
Score = 244 (91.0 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 69/212 (32%), Positives = 101/212 (47%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
R L GH V+ + S D LS S D +RLW L + GH V + FS
Sbjct: 69 RRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFSVD 128
Query: 514 GYYFASAGHDRMARLWAT--DSYHPLRLFVG----HYSDVDCVQFHPNSNY--VATGSSD 565
SA DR +LW T + + + +G H V CV+F PN+ + +GS D
Sbjct: 129 NRQIVSASRDRTIKLWNTLGECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQPTIVSGSWD 188
Query: 566 RTIRLWDCVTGSHVRL-LTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXX 624
RT+++W+ +T +R L GH V A++ S G AS G DG +WDL+
Sbjct: 189 RTVKVWN-LTNCKLRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLAEGKRLYSL 247
Query: 625 XXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
++ +LCFS + L ++ QD S+K+WD
Sbjct: 248 DAGS-IIHSLCFSPNRYWLCAATQD-SIKIWD 277
Score = 195 (73.7 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 64/237 (27%), Positives = 107/237 (45%)
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKG- 500
+R+ D TTR VGH+ V ++FS D ++S S+D TI+LW+ L C G
Sbjct: 99 LRLWDLSTGVTTRRFVGHDKDVLSVAFSVDNRQIVSASRDRTIKLWNTL-GECKYTIGGD 157
Query: 501 ----HGHPVWD--IKFSPHGYY--FASAGHDRMARLWATDSYHPLRLFV-GHYSDVDCVQ 551
GH W ++FSP+ + S DR ++W + LR + GH V+ V
Sbjct: 158 LGGGEGHNGWVSCVRFSPNTFQPTIVSGSWDRTVKVWNLTNCK-LRCNLEGHGGYVNAVA 216
Query: 552 FHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVH 611
P+ + A+G D LWD G + L +++L FS +L +A D ++
Sbjct: 217 VSPDGSLCASGGKDGVTLLWDLAEGKRLYSLDAGSI-IHSLCFSPNRYWLCAATQD-SIK 274
Query: 612 MWDLSNXXXXXXXXXXXDVVR-------ALCFSRDGNILASSGQDCSVKLWDFAKLS 661
+WDL + V + +L +S DG+ L + D +++++ + S
Sbjct: 275 IWDLESKHIVQDLKPEIPVSKNQMLYCTSLNWSADGSTLYAGYTDGTIRIYKISGFS 331
Score = 193 (73.0 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 55/169 (32%), Positives = 75/169 (44%)
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH H V D+ S G + S D RLW + R FVGH DV V F ++ +
Sbjct: 73 GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFSVDNRQI 132
Query: 560 ATGSSDRTIRLW----DC--VTGSHVRLLTGHKAPVYALSFSVCGRF---LASAGGDGNV 610
+ S DRTI+LW +C G + GH V + FS F + S D V
Sbjct: 133 VSASRDRTIKLWNTLGECKYTIGGDLGGGEGHNGWVSCVRFSP-NTFQPTIVSGSWDRTV 191
Query: 611 HMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659
+W+L+N V A+ S DG++ AS G+D LWD A+
Sbjct: 192 KVWNLTNCKLRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLAE 240
Score = 126 (49.4 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 27/79 (34%), Positives = 38/79 (48%)
Query: 536 PLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFS 595
P R GH V V + + +GS D +RLWD TG R GH V +++FS
Sbjct: 67 PFRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFS 126
Query: 596 VCGRFLASAGGDGNVHMWD 614
V R + SA D + +W+
Sbjct: 127 VDNRQIVSASRDRTIKLWN 145
Score = 120 (47.3 bits), Expect = 0.00035, P = 0.00035
Identities = 37/131 (28%), Positives = 57/131 (43%)
Query: 542 GHYSDVDCVQFHP--NSNYVATGSSDRTIRLWDCVT--------------GSHVRLLTGH 585
GH +DV P NS ++ + S D+++ +WD G R LTGH
Sbjct: 16 GH-NDVVTAIATPIDNSPFIVSSSRDKSLLVWDLTNPVQNVGEGAGASEYGVPFRRLTGH 74
Query: 586 KAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILAS 645
V + S G+F S DG + +WDLS V ++ FS D + S
Sbjct: 75 SHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFSVDNRQIVS 134
Query: 646 SGQDCSVKLWD 656
+ +D ++KLW+
Sbjct: 135 ASRDRTIKLWN 145
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 239 (89.2 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 55/176 (31%), Positives = 89/176 (50%)
Query: 401 ILAVGFSESYIKLWSL-VPQKLKAMKS-SDQLQDIEMECDDILV---------RIMDERN 449
+LA G + + LWS+ P + ++ + ++ + + + L+ R+ D
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 450 AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIK 509
A+ RTL+GH+ + L F P + S SQD I+LW + C+ Y+GH V ++
Sbjct: 95 AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 510 FSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSD 565
FSP G + ASA D +LW + + F GH V+ V+FHPN +A+GSSD
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 230 (86.0 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 49/143 (34%), Positives = 69/143 (48%)
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
G A+ G D LW+ + + + GH S V+ V+ + + GS +IR+WD
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRA 633
+R L GHKA + +L F G F+AS D N+ +WD+ VR
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 634 LCFSRDGNILASSGQDCSVKLWD 656
L FS DG LAS+ D +VKLWD
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWD 175
Score = 228 (85.3 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 57/203 (28%), Positives = 88/203 (43%)
Query: 448 RNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNT-IRLWSLLLWRCLVVYKGHGHPVW 506
+ A + +V H V L LL+ D+ + LWS+ C++ GH PV
Sbjct: 8 KTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVE 67
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
++ + + R+W ++ LR +GH +++ + FHP +VA+GS D
Sbjct: 68 SVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDT 127
Query: 567 TIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXX 626
I+LWD V GH V L FS G++LASA D V +WDL+
Sbjct: 128 NIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
Query: 627 XXDVVRALCFSRDGNILASSGQD 649
V + F + +LAS D
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSD 210
Score = 141 (54.7 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 36/136 (26%), Positives = 59/136 (43%)
Query: 525 MARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN-YVATGSSDRTIRLWDCVTGSHVRLLT 583
MA T + L+ V H S+V + S +ATG D + LW + + LT
Sbjct: 1 MATPVVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT 60
Query: 584 GHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNIL 643
GH +PV ++ + + + G++ +WDL + +L F G +
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 644 ASSGQDCSVKLWDFAK 659
AS QD ++KLWD +
Sbjct: 121 ASGSQDTNIKLWDIRR 136
>UNIPROTKB|Q9W7K9 [details] [associations]
symbol:SWiP-1 "SOCS box-containing WD protein SWiP-1"
species:9031 "Gallus gallus" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 CTD:26118
HOGENOM:HOG000063727 HOVERGEN:HBG034543 KO:K10341 OMA:GHHNDVV
EMBL:AADN02025704 EMBL:AF072879 IPI:IPI00570763 RefSeq:NP_990203.1
UniGene:Gga.3758 STRING:Q9W7K9 Ensembl:ENSGALT00000009090
GeneID:395685 KEGG:gga:395685 InParanoid:Q9W7K9 NextBio:20815757
Uniprot:Q9W7K9
Length = 421
Score = 256 (95.2 bits), Expect = 3.6e-19, P = 3.6e-19
Identities = 74/232 (31%), Positives = 107/232 (46%)
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLL-SCSQDNTIRLWSLLL-WRCLVVYK 499
++I D + L+ H VR L+F+PD SL+L S S+D T+R+W L + V +
Sbjct: 152 IKIWDVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLR 211
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + V+ FSP S G + LW D Y +R GH++DV +F P+ +
Sbjct: 212 GHQNWVYGCAFSPDSSILCSVGASKAVFLWDMDKYSMIRKLEGHHNDVVACEFSPDGALL 271
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGH----KAPVYA----------LSFSVCGRFLASAG 605
AT S D + +WD G +R GH P++A +SFS G +AS
Sbjct: 272 ATASYDTRVYVWDPYIGVILREF-GHLFPPPTPIFAGGANDRWVRSVSFSHDGLHIASLA 330
Query: 606 GDGNVHMWDLSNXXXXXXXXXXXDVVRALC--FSRDGNILASSGQDCSVKLW 655
D V W + + LC FS DG++LA+ QD SV W
Sbjct: 331 DDKMVRFWRIDEEYPVQVA----PLNNGLCCTFSTDGSVLAAGTQDGSVHFW 378
Score = 193 (73.0 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 58/206 (28%), Positives = 91/206 (44%)
Query: 465 KLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG-YYFASAGHD 523
+ F D+ LL + + I++W + + L+ H V D+ F+P G SA D
Sbjct: 133 RFKFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRD 192
Query: 524 RMARLW-ATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLL 582
+ R+W D + +++ GH + V F P+S+ + + + + + LWD S +R L
Sbjct: 193 KTLRVWDLKDDGNMMKVLRGHQNWVYGCAFSPDSSILCSVGASKAVFLWDMDKYSMIRKL 252
Query: 583 TGHKAPVYALSFSVCGRFLASAGGDGNVHMWD------------LSNXXXXXXXXXXXDV 630
GH V A FS G LA+A D V++WD L D
Sbjct: 253 EGHHNDVVACEFSPDGALLATASYDTRVYVWDPYIGVILREFGHLFPPPTPIFAGGANDR 312
Query: 631 -VRALCFSRDGNILASSGQDCSVKLW 655
VR++ FS DG +AS D V+ W
Sbjct: 313 WVRSVSFSHDGLHIASLADDKMVRFW 338
Score = 156 (60.0 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 42/154 (27%), Positives = 70/154 (45%)
Query: 506 WD-IKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSS 564
W KF A+ ++ ++W + L + H V + F P+ + + +S
Sbjct: 131 WHRFKFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSAS 190
Query: 565 -DRTIRLWDCVT-GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXX 622
D+T+R+WD G+ +++L GH+ VY +FS L S G V +WD+
Sbjct: 191 RDKTLRVWDLKDDGNMMKVLRGHQNWVYGCAFSPDSSILCSVGASKAVFLWDMDKYSMIR 250
Query: 623 XXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ V A FS DG +LA++ D V +WD
Sbjct: 251 KLEGHHNDVVACEFSPDGALLATASYDTRVYVWD 284
Score = 154 (59.3 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 53/191 (27%), Positives = 86/191 (45%)
Query: 394 EISEDVSILAVGFSESYIKLWSLVPQKL--KAMKSSDQLQDIEMECDDILV--------- 442
+ +D +LA G + IK+W + KL M ++ ++D+ D L+
Sbjct: 135 KFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKT 194
Query: 443 -RIMDERN-AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKG 500
R+ D ++ + L GH+ V +FSPD S+L S + LW + + + +G
Sbjct: 195 LRVWDLKDDGNMMKVLRGHQNWVYGCAFSPDSSILCSVGASKAVFLWDMDKYSMIRKLEG 254
Query: 501 HGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHP--LRLFVGHYSDVDCVQFHPNSNY 558
H + V +FSP G A+A +D +W D Y LR F GH F P +
Sbjct: 255 HHNDVVACEFSPDGALLATASYDTRVYVW--DPYIGVILREF-GHL-------FPPPTPI 304
Query: 559 VATGSSDRTIR 569
A G++DR +R
Sbjct: 305 FAGGANDRWVR 315
Score = 123 (48.4 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 36/113 (31%), Positives = 52/113 (46%)
Query: 551 QFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRF-LASAGGDGN 609
+F + +ATG ++ I++WD TG + L H V L+F+ G L SA D
Sbjct: 135 KFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKT 194
Query: 610 VHMWDLSNXXXXXXXXXXX-DVVRALCFSRDGNILASSGQDCSVKLWDFAKLS 661
+ +WDL + + V FS D +IL S G +V LWD K S
Sbjct: 195 LRVWDLKDDGNMMKVLRGHQNWVYGCAFSPDSSILCSVGASKAVFLWDMDKYS 247
Score = 60 (26.2 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 502 GHPVWDIKFSPHGYYFA-SAGHDRMARL--WA 530
G W + F+P G YFA S GH R+ +L W+
Sbjct: 34 GRENWTVAFAPDGSYFAWSQGH-RIVKLVPWS 64
>UNIPROTKB|E1BY92 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 EMBL:AADN02025704 IPI:IPI00685000
Ensembl:ENSGALT00000034682 ArrayExpress:E1BY92 Uniprot:E1BY92
Length = 420
Score = 255 (94.8 bits), Expect = 4.6e-19, P = 4.6e-19
Identities = 75/232 (32%), Positives = 108/232 (46%)
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLL-SCSQDNTIRLWSLLL-WRCLVVYK 499
++I D + L+ H VR L+F+PD SL+L S S+D T+R+W L + V +
Sbjct: 152 IKIWDVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLR 211
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + V+ FSP S G + LW D Y +R GH++DV +F P+ +
Sbjct: 212 GHQNWVYGCAFSPDSSILCSVGASKAVFLWDMDKYSMIRKLEGHHNDVVACEFSPDGALL 271
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGH----KAPVYA----------LSFSVCGRFLASAG 605
AT S D + +WD G +R GH P++A +SFS G +AS
Sbjct: 272 ATASYDTRVYVWDPYIGVILREF-GHLFPPPTPIFAGGANDRWVRSVSFSHDGLHIASLA 330
Query: 606 GDGNVHMWDLSNXXXXXXXXXXXDVVRALC--FSRDGNILASSGQDCSVKLW 655
D V W + + LC FS DG++LA+ GQD SV W
Sbjct: 331 DDKMVRFWRIDEEYPVQVA----PLNNGLCCTFSTDGSVLAA-GQDGSVHFW 377
Score = 193 (73.0 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 58/206 (28%), Positives = 91/206 (44%)
Query: 465 KLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG-YYFASAGHD 523
+ F D+ LL + + I++W + + L+ H V D+ F+P G SA D
Sbjct: 133 RFKFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRD 192
Query: 524 RMARLW-ATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLL 582
+ R+W D + +++ GH + V F P+S+ + + + + + LWD S +R L
Sbjct: 193 KTLRVWDLKDDGNMMKVLRGHQNWVYGCAFSPDSSILCSVGASKAVFLWDMDKYSMIRKL 252
Query: 583 TGHKAPVYALSFSVCGRFLASAGGDGNVHMWD------------LSNXXXXXXXXXXXDV 630
GH V A FS G LA+A D V++WD L D
Sbjct: 253 EGHHNDVVACEFSPDGALLATASYDTRVYVWDPYIGVILREFGHLFPPPTPIFAGGANDR 312
Query: 631 -VRALCFSRDGNILASSGQDCSVKLW 655
VR++ FS DG +AS D V+ W
Sbjct: 313 WVRSVSFSHDGLHIASLADDKMVRFW 338
Score = 156 (60.0 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 42/154 (27%), Positives = 70/154 (45%)
Query: 506 WD-IKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSS 564
W KF A+ ++ ++W + L + H V + F P+ + + +S
Sbjct: 131 WHRFKFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSAS 190
Query: 565 -DRTIRLWDCVT-GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXX 622
D+T+R+WD G+ +++L GH+ VY +FS L S G V +WD+
Sbjct: 191 RDKTLRVWDLKDDGNMMKVLRGHQNWVYGCAFSPDSSILCSVGASKAVFLWDMDKYSMIR 250
Query: 623 XXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ V A FS DG +LA++ D V +WD
Sbjct: 251 KLEGHHNDVVACEFSPDGALLATASYDTRVYVWD 284
Score = 154 (59.3 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 53/191 (27%), Positives = 86/191 (45%)
Query: 394 EISEDVSILAVGFSESYIKLWSLVPQKL--KAMKSSDQLQDIEMECDDILV--------- 442
+ +D +LA G + IK+W + KL M ++ ++D+ D L+
Sbjct: 135 KFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKT 194
Query: 443 -RIMDERN-AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKG 500
R+ D ++ + L GH+ V +FSPD S+L S + LW + + + +G
Sbjct: 195 LRVWDLKDDGNMMKVLRGHQNWVYGCAFSPDSSILCSVGASKAVFLWDMDKYSMIRKLEG 254
Query: 501 HGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHP--LRLFVGHYSDVDCVQFHPNSNY 558
H + V +FSP G A+A +D +W D Y LR F GH F P +
Sbjct: 255 HHNDVVACEFSPDGALLATASYDTRVYVW--DPYIGVILREF-GHL-------FPPPTPI 304
Query: 559 VATGSSDRTIR 569
A G++DR +R
Sbjct: 305 FAGGANDRWVR 315
Score = 123 (48.4 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 36/113 (31%), Positives = 52/113 (46%)
Query: 551 QFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRF-LASAGGDGN 609
+F + +ATG ++ I++WD TG + L H V L+F+ G L SA D
Sbjct: 135 KFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKT 194
Query: 610 VHMWDLSNXXXXXXXXXXX-DVVRALCFSRDGNILASSGQDCSVKLWDFAKLS 661
+ +WDL + + V FS D +IL S G +V LWD K S
Sbjct: 195 LRVWDLKDDGNMMKVLRGHQNWVYGCAFSPDSSILCSVGASKAVFLWDMDKYS 247
Score = 60 (26.2 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 502 GHPVWDIKFSPHGYYFA-SAGHDRMARL--WA 530
G W + F+P G YFA S GH R+ +L W+
Sbjct: 34 GRENWTVAFAPDGSYFAWSQGH-RIVKLVPWS 64
>UNIPROTKB|E1BBZ9 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:DAAA02048546 IPI:IPI00718427 RefSeq:XP_002695684.2
RefSeq:XP_885171.4 UniGene:Bt.20080 ProteinModelPortal:E1BBZ9
Ensembl:ENSBTAT00000006593 GeneID:614851 KEGG:bta:614851
Uniprot:E1BBZ9
Length = 421
Score = 255 (94.8 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 73/230 (31%), Positives = 105/230 (45%)
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLL-SCSQDNTIRLWSLLL-WRCLVVYK 499
++I D + LV H VR L+F+PD SL+L S S+D T+R+W L + V +
Sbjct: 152 IKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLR 211
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + V+ FSP S G + LW D Y +R GH+ DV F P+ +
Sbjct: 212 GHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPDGALL 271
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGH----KAPVYA----------LSFSVCGRFLASAG 605
AT S D + +WD TG+ + + GH P++A +SFS G +AS
Sbjct: 272 ATASYDTRVYIWDPHTGA-ILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLHVASLA 330
Query: 606 GDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
D V W + + A FS DG++LA+ D SV W
Sbjct: 331 DDKMVRFWRIDEDYPVQVAPLSNGLCCA--FSTDGSVLAAGTHDGSVYFW 378
Score = 184 (69.8 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 56/206 (27%), Positives = 91/206 (44%)
Query: 465 KLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG-YYFASAGHD 523
+ F D+ LL + + I++W + + L+ H V D+ F+P G SA D
Sbjct: 133 RFRFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRD 192
Query: 524 RMARLW-ATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLL 582
+ R+W D + +++ GH + V F P+S+ + + + + + LW+ + +R L
Sbjct: 193 KTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKL 252
Query: 583 TGHKAPVYALSFSVCGRFLASAGGDGNVHMWD------------LSNXXXXXXXXXXXDV 630
GH V A FS G LA+A D V++WD L D
Sbjct: 253 EGHHHDVVACDFSPDGALLATASYDTRVYIWDPHTGAILMEFGHLFPPPTPIFAGGANDR 312
Query: 631 -VRALCFSRDGNILASSGQDCSVKLW 655
VR++ FS DG +AS D V+ W
Sbjct: 313 WVRSVSFSHDGLHVASLADDKMVRFW 338
Score = 157 (60.3 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 55/204 (26%), Positives = 88/204 (43%)
Query: 397 EDVSILAVGFSESYIKLWSLVPQKL--KAMKSSDQLQDIEMECDDILV----------RI 444
+D +LA G + IK+W + KL + ++ ++D+ D L+ R+
Sbjct: 138 QDQLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRV 197
Query: 445 MDERN-AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGH 503
D ++ + L GH+ V +FSPD S+L S + LW++ + + +GH H
Sbjct: 198 WDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEGHHH 257
Query: 504 PVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGS 563
V FSP G A+A +D +W + L F GH F P + A G+
Sbjct: 258 DVVACDFSPDGALLATASYDTRVYIWDPHTGAILMEF-GHL-------FPPPTPIFAGGA 309
Query: 564 SDRTIRLWDCV-TGSHVRLLTGHK 586
+DR +R G HV L K
Sbjct: 310 NDRWVRSVSFSHDGLHVASLADDK 333
Score = 152 (58.6 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 41/154 (26%), Positives = 70/154 (45%)
Query: 506 WD-IKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSS 564
W +F A+ ++ ++W + L V H V + F P+ + + +S
Sbjct: 131 WHRFRFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSAS 190
Query: 565 -DRTIRLWDCVT-GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXX 622
D+T+R+WD G+ +++L GH+ VY+ +FS L S G V +W++
Sbjct: 191 RDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIR 250
Query: 623 XXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
V A FS DG +LA++ D V +WD
Sbjct: 251 KLEGHHHDVVACDFSPDGALLATASYDTRVYIWD 284
Score = 114 (45.2 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 33/111 (29%), Positives = 52/111 (46%)
Query: 551 QFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRF-LASAGGDGN 609
+F + +ATG ++ I++WD TG + L H V L+F+ G L SA D
Sbjct: 135 RFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKT 194
Query: 610 VHMWDLSNXXXXXXXXXXX-DVVRALCFSRDGNILASSGQDCSVKLWDFAK 659
+ +WDL + + V + FS D ++L S G +V LW+ K
Sbjct: 195 LRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDK 245
Score = 58 (25.5 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 502 GHPVWDIKFSPHGYYFA-SAGHDRMARL--WA 530
G W + F+P G YFA S GH R +L W+
Sbjct: 34 GRENWTVAFAPDGSYFAWSQGH-RTVKLVPWS 64
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 254 (94.5 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 73/284 (25%), Positives = 132/284 (46%)
Query: 400 SILAVGFSESYIKLWSLVPQKL-KAMKS-SDQLQDIEME--------CD-DILVRIMD-E 447
+I+A ++ IK+W +L + +K +D + DI ++ C D+ +++ D
Sbjct: 119 TIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFG 178
Query: 448 RNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWD 507
+ + ++L GHE V ++F P +LS S+D+TI+ W + C+ ++GH V
Sbjct: 179 QTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRM 238
Query: 508 IKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHP------------- 554
I+ S G FASA D+ +W+ + + H V+CV++ P
Sbjct: 239 IRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPE 298
Query: 555 -NSNYVA-TGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHM 612
NS ++ +GS DR+I+ W+ TG + L H+ V L+F G++L S D + +
Sbjct: 299 GNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRV 358
Query: 613 WDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
W+LS V + F + + + D S K+W+
Sbjct: 359 WELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVWE 402
Score = 223 (83.6 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 65/220 (29%), Positives = 92/220 (41%)
Query: 453 TRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSP 512
T+ L GH P+ ++ F P +++ SCS+D TI++W + KGH V DI
Sbjct: 99 TQKLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDA 158
Query: 513 HGYYFASAGHDRMARLWAT-DSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLW 571
G S D +LW +Y L+ GH V V F P ++V + S D TI+ W
Sbjct: 159 AGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQW 218
Query: 572 DCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVV 631
D TG V GH V + S G ASA D V +W + V
Sbjct: 219 DISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAV 278
Query: 632 RALCFSRD------------GN---ILASSGQDCSVKLWD 656
+ ++ D GN IL S +D S+K W+
Sbjct: 279 ECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWN 318
Score = 222 (83.2 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 59/237 (24%), Positives = 101/237 (42%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL-LLWRCLV 496
+D +++ D + RTL GH V ++ L+SCS D +I+LW + CL
Sbjct: 126 EDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLK 185
Query: 497 VYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNS 556
KGH H V + F P G + SA D + W + + + F GH V ++ +
Sbjct: 186 SLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDG 245
Query: 557 NYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFS-------VCGR--------FL 601
A+ S D+T+ +W T S +L H+ V + ++ V G+ L
Sbjct: 246 TLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHIL 305
Query: 602 ASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFA 658
S D ++ W+++ + VR L F G L S D ++++W+ +
Sbjct: 306 FSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELS 362
Score = 191 (72.3 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 48/163 (29%), Positives = 74/163 (45%)
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH P+ + F P AS D ++W ++ R GH V+ + +
Sbjct: 104 GHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQL 163
Query: 560 ATGSSDRTIRLWDC-VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNX 618
+ SSD +I+LWD T ++ L GH+ V +++F G F+ SA D + WD+S
Sbjct: 164 VSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTG 223
Query: 619 XXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAKLS 661
D VR + S DG + AS+ D +V +W FA S
Sbjct: 224 YCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKS 266
Score = 154 (59.3 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 48/193 (24%), Positives = 79/193 (40%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDI 440
YT V IS D ++ A + + +WS + K + L+D E + +
Sbjct: 227 YTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLV-----LRDHEHAVECV 281
Query: 441 LVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKG 500
E +T T V + P + +L S S+D +I+ W++ L
Sbjct: 282 ------EWAPDTAYTNVTGQQPEGNSTH-----ILFSGSRDRSIKAWNINTGDVLFTLLA 330
Query: 501 HGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVA 560
H + V + F P G Y S D+ R+W + ++ H V V FH S +V
Sbjct: 331 HENWVRGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVI 390
Query: 561 TGSSDRTIRLWDC 573
TGS D + ++W+C
Sbjct: 391 TGSVDMSCKVWEC 403
Score = 153 (58.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 38/136 (27%), Positives = 60/136 (44%)
Query: 524 RMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLT 583
R A W +L GH + V FHP +A+ S D TI++WD TG R L
Sbjct: 87 RQAADWIPRPPETQKL-TGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLK 145
Query: 584 GHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXD-VVRALCFSRDGNI 642
GH V ++ G+ L S D ++ +WD + V ++ F G+
Sbjct: 146 GHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDF 205
Query: 643 LASSGQDCSVKLWDFA 658
+ S+ +D ++K WD +
Sbjct: 206 VLSASRDHTIKQWDIS 221
Score = 118 (46.6 bits), Expect = 0.00082, P = 0.00082
Identities = 24/81 (29%), Positives = 33/81 (40%)
Query: 582 LTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGN 641
LTGH+ P+ + F +AS D + +WD D V + G
Sbjct: 102 LTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGK 161
Query: 642 ILASSGQDCSVKLWDFAKLSD 662
L S D S+KLWDF + D
Sbjct: 162 QLVSCSSDLSIKLWDFGQTYD 182
>ZFIN|ZDB-GENE-990415-89 [details] [associations]
symbol:gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2-like 1" species:7955 "Danio rerio"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI;IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:2000114 "regulation of establishment of
cell polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IMP] [GO:2000543 "positive
regulation of gastrulation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-990415-89 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0001525 GO:GO:0030178 GO:GO:0060027
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 HOGENOM:HOG000091643
KO:K14753 CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 EMBL:AF025330 EMBL:AY423038 EMBL:BC049459
IPI:IPI00507097 RefSeq:NP_571519.1 UniGene:Dr.75572
ProteinModelPortal:O42248 SMR:O42248 STRING:O42248 PRIDE:O42248
Ensembl:ENSDART00000061001 GeneID:30722 KEGG:dre:30722
InParanoid:O42248 NextBio:20807071 ArrayExpress:O42248 Bgee:O42248
Uniprot:O42248
Length = 317
Score = 237 (88.5 bits), Expect = 5.5e-19, P = 5.5e-19
Identities = 66/215 (30%), Positives = 97/215 (45%)
Query: 452 TTR-TLVGHEGPVRKLSFSPD-RSLLLSCSQDNTIRLWSLLLWRCLV-----VYKGHGHP 504
T R TL GH G V +++ +P ++LS S+D TI +W L +GH H
Sbjct: 6 TVRGTLKGHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHF 65
Query: 505 VWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSS 564
V D+ S G + S D RLW + R FVGH DV V F ++ + +GS
Sbjct: 66 VSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSR 125
Query: 565 DRTIRLWDCVTGSHVRLLT-GHKAPVYALSFSV--CGRFLASAGGDGNVHMWDLSNXXXX 621
D+TI+LW+ + + H V + FS + S G D V +W+L+N
Sbjct: 126 DKTIKLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLK 185
Query: 622 XXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ + S DG++ AS G+D LWD
Sbjct: 186 TNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Score = 222 (83.2 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 71/247 (28%), Positives = 108/247 (43%)
Query: 446 DERN-AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHP 504
DE N R L GH V + S D LS S D T+RLW L + GH
Sbjct: 48 DETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKD 107
Query: 505 VWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSD-VDCVQFHPNSN--YVAT 561
V + FS S D+ +LW T + +++ V CV+F PNS+ + +
Sbjct: 108 VLSVAFSADNRQIVSGSRDKTIKLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVS 167
Query: 562 GSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXX 621
D+ +++W+ GH + ++ S G AS G DG +WDL N
Sbjct: 168 CGWDKMVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL-NEGKH 226
Query: 622 XXXXXXXDVVRALCFSRDGNIL-ASSGQDCSVKLWDF-AKLS-DEVGTEEVNLSHSADIK 678
D + ALCFS + L A++G S+K+WD K+ DE+ + + + A+
Sbjct: 227 LYTLDGGDTINALCFSPNRYWLCAATGP--SIKIWDLEGKIIVDELRQDIITTNSKAEPP 284
Query: 679 N-SSLAY 684
+SLA+
Sbjct: 285 QCTSLAW 291
Score = 213 (80.0 bits), Expect = 5.9e-15, P = 5.9e-15
Identities = 56/181 (30%), Positives = 86/181 (47%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +R+ D TTR VGH V ++FS D ++S S+D TI+LW+ L C
Sbjct: 84 DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTL-GVCKYTI 142
Query: 499 KGHGHPVWD--IKFSPHGY--YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHP 554
+ H W ++FSP+ S G D+M ++W + +GH ++ V P
Sbjct: 143 QDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNTVTVSP 202
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+ + A+G D LWD G H+ L G + AL FS +L +A G ++ +WD
Sbjct: 203 DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDT-INALCFSPNRYWLCAATGP-SIKIWD 260
Query: 615 L 615
L
Sbjct: 261 L 261
>FB|FBgn0030011 [details] [associations]
symbol:Gbeta5 "Gbeta5" species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K04539 OMA:ATDGLHE EMBL:BT004841 RefSeq:NP_572452.1
UniGene:Dm.11050 SMR:Q9W3J1 IntAct:Q9W3J1 STRING:Q9W3J1
EnsemblMetazoa:FBtr0071189 GeneID:31744 KEGG:dme:Dmel_CG10763
UCSC:CG10763-RA CTD:31744 FlyBase:FBgn0030011 InParanoid:Q9W3J1
OrthoDB:EOG4TTF0F GenomeRNAi:31744 NextBio:775120 Uniprot:Q9W3J1
Length = 358
Score = 249 (92.7 bits), Expect = 5.6e-19, P = 5.6e-19
Identities = 65/214 (30%), Positives = 99/214 (46%)
Query: 446 DERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPV 505
DE A RT+ H + + +L+ S D+T LW + + L + GH V
Sbjct: 144 DEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHSGDV 203
Query: 506 WDIKFSPH--GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGS 563
I +P+ G F S DRMA +W S H ++ F GH SDV+ V+FHP + +ATGS
Sbjct: 204 MAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSVKFHPCGDAIATGS 263
Query: 564 SDRTIRLWDCVTGSHVRLLTGHKA--PVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXX 621
D + RL+D V + V ++ FSV GR L + D V++WD
Sbjct: 264 DDSSCRLYDMRADREVAVFAKESIIFGVNSVDFSVSGRLLFAGYNDYTVNLWDTLKSERV 323
Query: 622 XXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
+ V + S DG L++ D ++++W
Sbjct: 324 CLLYGHENKVSCVQVSPDGTALSTGSWDYTIRVW 357
Score = 198 (74.8 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 82/322 (25%), Positives = 133/322 (41%)
Query: 412 KLWSLVPQ----KLKAMKSSDQLQDIEMECDDILVRIMDER--NAETTRTLVGHEGPVRK 465
K+ SLV + K K + +L D+ + +I R+ N + + L GH+ V
Sbjct: 18 KMASLVREAENLKTKLEEERQKLNDVNLS--NIAERLEQIAYVNIKPRKVLKGHQAKVLC 75
Query: 466 LSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHG--HPV-WDIK--FSPHGYYFASA 520
+SPD+ ++S SQD L++W K H P W + ++P G + A
Sbjct: 76 TDWSPDKRHIISSSQDGR-----LIIWDAFTTNKEHAVTMPTTWIMACAYAPSGNFVACG 130
Query: 521 GHDRMARLWATDSYHPL---RLFVG-HYSDVDCVQFHPNSNY-VATGSSDRTIRLWDCVT 575
G D ++ S + + VG H S + C +PNS+ + TGS D T LWD +
Sbjct: 131 GLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCC-IYPNSDQQILTGSGDSTCALWDVES 189
Query: 576 GSHVRLLTGHKAPVYALSFSV--CGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRA 633
G ++ GH V A+ + G S D +WD+ + V +
Sbjct: 190 GQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNS 249
Query: 634 LCFSRDGNILASSGQDCSVKLWD---------FAKLSDEVGTEEVNLSHSADIKNSSLA- 683
+ F G+ +A+ D S +L+D FAK S G V+ S S + +
Sbjct: 250 VKFHPCGDAIATGSDDSSCRLYDMRADREVAVFAKESIIFGVNSVDFSVSGRLLFAGYND 309
Query: 684 YLVRSYKTKASPLLHLIFSRRN 705
Y V + T S + L++ N
Sbjct: 310 YTVNLWDTLKSERVCLLYGHEN 331
>UNIPROTKB|F1RJ54 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:FP102612 RefSeq:XP_003131801.1 UniGene:Ssc.25169
Ensembl:ENSSSCT00000019321 GeneID:100525660 KEGG:ssc:100525660
Uniprot:F1RJ54
Length = 421
Score = 254 (94.5 bits), Expect = 6.1e-19, P = 6.1e-19
Identities = 73/230 (31%), Positives = 104/230 (45%)
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLL-SCSQDNTIRLWSLLL-WRCLVVYK 499
++I D + LV H VR L+F+PD SL+L S S+D T+R+W L + V +
Sbjct: 152 IKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLR 211
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + V+ FSP S G + LW D Y +R GH+ DV F P+ +
Sbjct: 212 GHQNWVYSCAFSPDSSMLCSVGASKAVFLWDMDKYTMIRKLEGHHHDVVACDFSPDGALL 271
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGH----KAPVYA----------LSFSVCGRFLASAG 605
AT S D + +WD TG + + GH P++A +SFS G +AS
Sbjct: 272 ATASYDTRVYIWDPHTGD-ILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLHVASLA 330
Query: 606 GDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
D V W + + A FS DG++LA+ D SV W
Sbjct: 331 DDKMVRFWRIDEDYPVQVAPLSNGLCCA--FSTDGSVLAAGTHDGSVYFW 378
Score = 189 (71.6 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 57/206 (27%), Positives = 91/206 (44%)
Query: 465 KLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG-YYFASAGHD 523
+ F D+ LL + + I++W + + L+ H V D+ F+P G SA D
Sbjct: 133 RFRFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRD 192
Query: 524 RMARLW-ATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLL 582
+ R+W D + +++ GH + V F P+S+ + + + + + LWD + +R L
Sbjct: 193 KTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWDMDKYTMIRKL 252
Query: 583 TGHKAPVYALSFSVCGRFLASAGGDGNVHMWD------------LSNXXXXXXXXXXXDV 630
GH V A FS G LA+A D V++WD L D
Sbjct: 253 EGHHHDVVACDFSPDGALLATASYDTRVYIWDPHTGDILMEFGHLFPPPTPIFAGGANDR 312
Query: 631 -VRALCFSRDGNILASSGQDCSVKLW 655
VR++ FS DG +AS D V+ W
Sbjct: 313 WVRSVSFSHDGLHVASLADDKMVRFW 338
Score = 157 (60.3 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 42/154 (27%), Positives = 70/154 (45%)
Query: 506 WD-IKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSS 564
W +F A+ ++ ++W + L V H V + F P+ + + +S
Sbjct: 131 WHRFRFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSAS 190
Query: 565 -DRTIRLWDCVT-GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXX 622
D+T+R+WD G+ +++L GH+ VY+ +FS L S G V +WD+
Sbjct: 191 RDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWDMDKYTMIR 250
Query: 623 XXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
V A FS DG +LA++ D V +WD
Sbjct: 251 KLEGHHHDVVACDFSPDGALLATASYDTRVYIWD 284
Score = 157 (60.3 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 55/204 (26%), Positives = 87/204 (42%)
Query: 397 EDVSILAVGFSESYIKLWSLVPQKL--KAMKSSDQLQDIEMECDDILV----------RI 444
+D +LA G + IK+W + KL + ++ ++D+ D L+ R+
Sbjct: 138 QDQLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRV 197
Query: 445 MDERN-AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGH 503
D ++ + L GH+ V +FSPD S+L S + LW + + + +GH H
Sbjct: 198 WDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWDMDKYTMIRKLEGHHH 257
Query: 504 PVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGS 563
V FSP G A+A +D +W + L F GH F P + A G+
Sbjct: 258 DVVACDFSPDGALLATASYDTRVYIWDPHTGDILMEF-GHL-------FPPPTPIFAGGA 309
Query: 564 SDRTIRLWDCV-TGSHVRLLTGHK 586
+DR +R G HV L K
Sbjct: 310 NDRWVRSVSFSHDGLHVASLADDK 333
Score = 119 (46.9 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 34/111 (30%), Positives = 52/111 (46%)
Query: 551 QFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRF-LASAGGDGN 609
+F + +ATG ++ I++WD TG + L H V L+F+ G L SA D
Sbjct: 135 RFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKT 194
Query: 610 VHMWDLSNXXXXXXXXXXX-DVVRALCFSRDGNILASSGQDCSVKLWDFAK 659
+ +WDL + + V + FS D ++L S G +V LWD K
Sbjct: 195 LRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWDMDK 245
Score = 58 (25.5 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 502 GHPVWDIKFSPHGYYFA-SAGHDRMARL--WA 530
G W + F+P G YFA S GH R +L W+
Sbjct: 34 GRENWTVAFAPDGSYFAWSQGH-RTVKLVPWS 64
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 239 (89.2 bits), Expect = 6.7e-19, P = 6.7e-19
Identities = 66/240 (27%), Positives = 107/240 (44%)
Query: 446 DERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPV 505
D+ R + GH V+ + S D LS S D +RLW L + GH V
Sbjct: 49 DKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDV 108
Query: 506 WDIKFSPHGYYFASAGHDRMARLWAT--DSYHPLRLFVGHYSDVDCVQFHPNSNY--VAT 561
+ FS SA DR +LW T + + + GH V CV+F PN+ + +
Sbjct: 109 LSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVS 168
Query: 562 GSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXX 621
S D+T+++W+ L GH + ++ S G AS G DG + +WDL+
Sbjct: 169 ASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKL 228
Query: 622 XXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSS 681
++ +LCFS + L ++ ++ S+++WD S V +V+L A+ + S
Sbjct: 229 YSLEAGS-IIHSLCFSPNRYWLCAATEN-SIRIWDLESKS-VVEDLKVDLKAEAEKTDGS 285
Score = 227 (85.0 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 67/230 (29%), Positives = 102/230 (44%)
Query: 455 TLVGHEGPVRKLSFSPDRS-LLLSCSQDNTIRLWSLLLW-RCLVVYK----GHGHPVWDI 508
T+ H V ++ D S ++++ S+D +I LW L + V + GH H V D+
Sbjct: 10 TMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDV 69
Query: 509 KFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTI 568
S G + S D RLW + R FVGH DV V F ++ + + S DRTI
Sbjct: 70 VLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTI 129
Query: 569 RLWDCVTGSHVRL--LTGHKAPVYALSFS--VCGRFLASAGGDGNVHMWDLSNXXXXXXX 624
+LW+ + + GHK V + FS + SA D V +W+L N
Sbjct: 130 KLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTL 189
Query: 625 XXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHS 674
+ + S DG++ AS G+D + LWD A+ E ++ HS
Sbjct: 190 AGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHS 239
Score = 213 (80.0 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 52/181 (28%), Positives = 86/181 (47%)
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRC-LVVYKG 500
+R+ D E+TR VGH V ++FS D ++S S+D TI+LW+ L C + +
Sbjct: 87 LRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTL-GECKYTISEA 145
Query: 501 HGHPVWD--IKFSPHGYY--FASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNS 556
GH W ++FSP+ SA D+ ++W + GH ++ V P+
Sbjct: 146 DGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDG 205
Query: 557 NYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLS 616
+ A+G D I LWD G + L +++L FS R+ A + ++ +WDL
Sbjct: 206 SLCASGGKDGVILLWDLAEGKKLYSLEAGSI-IHSLCFSP-NRYWLCAATENSIRIWDLE 263
Query: 617 N 617
+
Sbjct: 264 S 264
Score = 119 (46.9 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D V++ + +N + TL GH G + ++ SPD SL S +D I LW L + L
Sbjct: 172 DKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSL 231
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDS 533
+ G + + FSP+ Y+ +A + + R+W +S
Sbjct: 232 EA-GSIIHSLCFSPNRYWLCAATENSI-RIWDLES 264
Score = 44 (20.5 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 633 ALCFSRDGNILASSGQDCSVKLWDFAK 659
+L +S DGN L S D +++W +
Sbjct: 299 SLNWSADGNTLFSGYTDGVIRVWGIGR 325
Score = 40 (19.1 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 584 GHKAPV-Y--ALSFSVCGRFLASAGGDGNVHMWDL 615
G+K V Y +L++S G L S DG + +W +
Sbjct: 289 GNKTKVIYCTSLNWSADGNTLFSGYTDGVIRVWGI 323
>WB|WBGene00001680 [details] [associations]
symbol:gpb-2 species:6239 "Caenorhabditis elegans"
[GO:0040007 "growth" evidence=IMP] [GO:0030163 "protein catabolic
process" evidence=IMP] [GO:0008277 "regulation of G-protein coupled
receptor protein signaling pathway" evidence=IGI] [GO:0046662
"regulation of oviposition" evidence=IMP] [GO:0040012 "regulation
of locomotion" evidence=IMP] [GO:0007631 "feeding behavior"
evidence=IMP] [GO:0007212 "dopamine receptor signaling pathway"
evidence=IMP] [GO:0032094 "response to food" evidence=IMP]
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=IGI;IMP] [GO:0043051 "regulation of pharyngeal
pumping" evidence=IMP] [GO:0043025 "neuronal cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0040007 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007212
GO:GO:0007631 GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0040012 GO:GO:0046662
GO:GO:0043051 GO:GO:0032094 GO:GO:0007213 GO:GO:0030163
GO:GO:0008277 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 InterPro:IPR016346 PIRSF:PIRSF002394
EMBL:AF291847 EMBL:Z71263 PIR:T22478 RefSeq:NP_492072.1
UniGene:Cel.18555 ProteinModelPortal:Q20636 SMR:Q20636
STRING:Q20636 PaxDb:Q20636 EnsemblMetazoa:F52A8.2.1
EnsemblMetazoa:F52A8.2.2 GeneID:172483 KEGG:cel:CELE_F52A8.2
UCSC:F52A8.2 CTD:172483 WormBase:F52A8.2 InParanoid:Q20636
KO:K04539 OMA:ATDGLHE NextBio:875701 Uniprot:Q20636
Length = 356
Score = 248 (92.4 bits), Expect = 6.8e-19, P = 6.8e-19
Identities = 81/335 (24%), Positives = 150/335 (44%)
Query: 331 KTKSDPNAPPVDRIPLPPLKDSEKIDKLKALREATKRVTLGPESLPSIACYTLLNARQQV 390
+ K D ++ IP+ + +E++D + AL +R+ G + + C ++ +
Sbjct: 28 RKKLDQERHKLNDIPIQ--QAAERLDVMGALGVKQRRILKG--HVGKVLCMDWSLDKRHI 83
Query: 391 TCAEISEDVSILAV-GFSESYIKLWSLVPQKLKAMKSSDQLQDI-----EMECDDILVRI 444
+ S+D ++ GF+ + ++ + A S Q I + +C + +
Sbjct: 84 VSS--SQDGKVIVWDGFTTNKEHALTMPTTWVMACAFSPSSQMIACGGLDNKCSVVPLSF 141
Query: 445 MDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHP 504
D+ + R + H + +F +L+L+ S D+T +W + + + + GH
Sbjct: 142 EDDI-IQKKRQVATHTSYMSCCTFLRSDNLILTGSGDSTCAIWDVESGQLIQNFHGHTGD 200
Query: 505 VW--DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATG 562
V+ D+ G F SAG D+ + +W S ++ F GH +D++ V+FHPN + ATG
Sbjct: 201 VFAIDVPKCDTGNTFISAGADKHSLVWDIRSGQCVQSFEGHEADINTVRFHPNGDAFATG 260
Query: 563 SSDRTIRLWDCVTGSHVRLLTGHKA--PVYALSFSVCGRFLASAGGDGNVHMWDLSNXXX 620
S D T RL+D V + PV + FS+ GR L + GD V +WD
Sbjct: 261 SDDATCRLFDLRADRQVCVYEKESILFPVNGVDFSLSGRILFAGYGDYRVGVWDSLKCAR 320
Query: 621 XXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
+ + L S DG + S+ DC++++W
Sbjct: 321 HSVLYGHENRISCLRTSPDGTAVCSASWDCTIRIW 355
Score = 193 (73.0 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 60/239 (25%), Positives = 98/239 (41%)
Query: 429 QLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWS 488
+L DI ++ + +M + R L GH G V + +S D+ ++S SQD +
Sbjct: 37 KLNDIPIQQAAERLDVMGALGVKQRRILKGHVGKVLCMDWSLDKRHIVSSSQDGKV---- 92
Query: 489 LLLWRCLVVYKGHG--HPV-WDIK--FSPHGYYFASAGHDRMARL----WATDSYHPLRL 539
++W K H P W + FSP A G D + + D R
Sbjct: 93 -IVWDGFTTNKEHALTMPTTWVMACAFSPSSQMIACGGLDNKCSVVPLSFEDDIIQKKRQ 151
Query: 540 FVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVC-- 597
H S + C F + N + TGS D T +WD +G ++ GH V+A+ C
Sbjct: 152 VATHTSYMSCCTFLRSDNLILTGSGDSTCAIWDVESGQLIQNFHGHTGDVFAIDVPKCDT 211
Query: 598 GRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
G SAG D + +WD+ + + + F +G+ A+ D + +L+D
Sbjct: 212 GNTFISAGADKHSLVWDIRSGQCVQSFEGHEADINTVRFHPNGDAFATGSDDATCRLFD 270
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 235 (87.8 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 60/221 (27%), Positives = 99/221 (44%)
Query: 439 DILVRIM---DERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCL 495
D LV++ DER E TL GH+ V + SP +++ S S D IRLW L + +
Sbjct: 41 DDLVKVWKWSDER-LELQSTLEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQI 99
Query: 496 VVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPN 555
W + FSP + A+ H ++ ++ + + + P+
Sbjct: 100 RAIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPD 159
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
Y+A+G+ D I ++D TG + L GH P+ +L+FS + L +A DG + ++++
Sbjct: 160 GKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEV 219
Query: 616 SNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ V + FS D SS D SVK+WD
Sbjct: 220 QHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWD 260
Score = 199 (75.1 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 39/135 (28%), Positives = 70/135 (51%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D ++ I D + TL GH P+R L+FSPD LL++ S D I+++ +
Sbjct: 169 DGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATL 228
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
GHG V ++ FSP +F S+ D+ ++W + + F+ H V V+++ N +
Sbjct: 229 SGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSK 288
Query: 559 VATGSSDRTIRLWDC 573
+ + + D+ I ++DC
Sbjct: 289 IVSVADDQEIHVYDC 303
Score = 183 (69.5 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 62/248 (25%), Positives = 114/248 (45%)
Query: 469 SPDRS-LLLSCSQDNTIRLWSLLLWRCLV--VYKGHGHPVWDIKFSPHGYYFASAGHDRM 525
S D S L++S S D+ +++W R + +GH V + SP G AS+ D
Sbjct: 28 SNDGSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSPSGNIMASSSLDAH 87
Query: 526 ARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH 585
RLW +S +R D V F P+S ++ATGS + ++ TG L
Sbjct: 88 IRLWDLESGKQIRAIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTR 147
Query: 586 KAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILAS 645
+ ++++S G++LAS DG ++++D++ +R+L FS D +L +
Sbjct: 148 GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVT 207
Query: 646 SGQDCSVKLWDF--AKLSDEV---GTEEVNLSHSAD---IKNSSLAYLVRSYKTKASPLL 697
+ D +K+++ A L+ + G+ +N++ S D +SS V+ + A +
Sbjct: 208 ASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCV 267
Query: 698 HLIFSRRN 705
H ++
Sbjct: 268 HTFLDHQD 275
Score = 174 (66.3 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 53/244 (21%), Positives = 103/244 (42%)
Query: 382 TLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK-LKAMKS----------SDQL 430
TL + V ++S +I+A +++I+LW L K ++A+ + S
Sbjct: 59 TLEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSPDS 118
Query: 431 QDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL 490
Q + V I + +L + +++SPD L S + D I ++ +
Sbjct: 119 QHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIA 178
Query: 491 LWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCV 550
+ L +GH P+ + FSP +A D +++ GH S V V
Sbjct: 179 TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNV 238
Query: 551 QFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNV 610
F P+ + + SSD+++++WD + V H+ V+ + ++ G + S D +
Sbjct: 239 AFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEI 298
Query: 611 HMWD 614
H++D
Sbjct: 299 HVYD 302
>UNIPROTKB|G8JL27 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0001891 "phagocytic
cup" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AADN02030122
Ensembl:ENSGALT00000000171 Uniprot:G8JL27
Length = 320
Score = 235 (87.8 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 64/211 (30%), Positives = 95/211 (45%)
Query: 455 TLVGHEGPVRKLSFSPD-RSLLLSCSQDNTIRLWSLLLWRCLV-----VYKGHGHPVWDI 508
TL GH G V +++ +P ++LS S+D TI +W L +GH H V D+
Sbjct: 13 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 72
Query: 509 KFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTI 568
S G + S D RLW + R FVGH DV V F ++ + +GS D+TI
Sbjct: 73 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTI 132
Query: 569 RLWDCVTGSHVRLLT-GHKAPVYALSFSV--CGRFLASAGGDGNVHMWDLSNXXXXXXXX 625
+LW+ + + H V + FS + S G D V +W+L+N
Sbjct: 133 KLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 192
Query: 626 XXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ + S DG++ AS G+D LWD
Sbjct: 193 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 223
Score = 234 (87.4 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 74/247 (29%), Positives = 110/247 (44%)
Query: 446 DERN-AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHP 504
DE N R L GH V + S D LS S D T+RLW L + GH
Sbjct: 51 DETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKD 110
Query: 505 VWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSD-VDCVQFHPNSN--YVAT 561
V + FS S D+ +LW T + +S+ V CV+F PNS+ + +
Sbjct: 111 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 170
Query: 562 GSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXX 621
D+ +++W+ GH + ++ S G AS G DG +WDL N
Sbjct: 171 CGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL-NEGKH 229
Query: 622 XXXXXXXDVVRALCFSRDGNIL-ASSGQDCSVKLWDF-AKLS-DEVGTEEVNLSHSADIK 678
D++ ALCFS + L A++G S+K+WD K+ DE+ E ++ S A+
Sbjct: 230 LYTLDGGDIINALCFSPNRYWLCAATGP--SIKIWDLEGKIIVDELKQEVISTSSKAEPP 287
Query: 679 N-SSLAY 684
+SLA+
Sbjct: 288 QCTSLAW 294
Score = 211 (79.3 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 63/230 (27%), Positives = 99/230 (43%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +R+ D TTR VGH V ++FS D ++S S+D TI+LW+ L C
Sbjct: 87 DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTV 145
Query: 499 KGHGHPVWD--IKFSPHGY--YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHP 554
+ H W ++FSP+ S G D++ ++W + +GH ++ V P
Sbjct: 146 QDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP 205
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+ + A+G D LWD G H+ L G + AL FS +L +A G ++ +WD
Sbjct: 206 DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI-INALCFSPNRYWLCAATGP-SIKIWD 263
Query: 615 LSNXXX---------XXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
L +L +S DG L + D V++W
Sbjct: 264 LEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVW 313
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 235 (87.8 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 64/211 (30%), Positives = 95/211 (45%)
Query: 455 TLVGHEGPVRKLSFSPD-RSLLLSCSQDNTIRLWSLLLWRCLV-----VYKGHGHPVWDI 508
TL GH G V +++ +P ++LS S+D TI +W L +GH H V D+
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 509 KFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTI 568
S G + S D RLW + R FVGH DV V F ++ + +GS D+TI
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 569 RLWDCVTGSHVRLLT-GHKAPVYALSFSV--CGRFLASAGGDGNVHMWDLSNXXXXXXXX 625
+LW+ + + H V + FS + S G D V +W+L+N
Sbjct: 130 KLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189
Query: 626 XXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ + S DG++ AS G+D LWD
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Score = 234 (87.4 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 74/247 (29%), Positives = 110/247 (44%)
Query: 446 DERN-AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHP 504
DE N R L GH V + S D LS S D T+RLW L + GH
Sbjct: 48 DETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKD 107
Query: 505 VWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSD-VDCVQFHPNSN--YVAT 561
V + FS S D+ +LW T + +S+ V CV+F PNS+ + +
Sbjct: 108 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 167
Query: 562 GSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXX 621
D+ +++W+ GH + ++ S G AS G DG +WDL N
Sbjct: 168 CGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL-NEGKH 226
Query: 622 XXXXXXXDVVRALCFSRDGNIL-ASSGQDCSVKLWDF-AKLS-DEVGTEEVNLSHSADIK 678
D++ ALCFS + L A++G S+K+WD K+ DE+ E ++ S A+
Sbjct: 227 LYTLDGGDIINALCFSPNRYWLCAATGP--SIKIWDLEGKIIVDELKQEVISTSSKAEPP 284
Query: 679 N-SSLAY 684
+SLA+
Sbjct: 285 QCTSLAW 291
Score = 211 (79.3 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 63/230 (27%), Positives = 99/230 (43%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +R+ D TTR VGH V ++FS D ++S S+D TI+LW+ L C
Sbjct: 84 DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTV 142
Query: 499 KGHGHPVWD--IKFSPHGY--YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHP 554
+ H W ++FSP+ S G D++ ++W + +GH ++ V P
Sbjct: 143 QDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP 202
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+ + A+G D LWD G H+ L G + AL FS +L +A G ++ +WD
Sbjct: 203 DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI-INALCFSPNRYWLCAATGP-SIKIWD 260
Query: 615 LSNXXX---------XXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
L +L +S DG L + D V++W
Sbjct: 261 LEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVW 310
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 235 (87.8 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 64/211 (30%), Positives = 95/211 (45%)
Query: 455 TLVGHEGPVRKLSFSPD-RSLLLSCSQDNTIRLWSLLLWRCLV-----VYKGHGHPVWDI 508
TL GH G V +++ +P ++LS S+D TI +W L +GH H V D+
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 509 KFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTI 568
S G + S D RLW + R FVGH DV V F ++ + +GS D+TI
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 569 RLWDCVTGSHVRLLT-GHKAPVYALSFSV--CGRFLASAGGDGNVHMWDLSNXXXXXXXX 625
+LW+ + + H V + FS + S G D V +W+L+N
Sbjct: 130 KLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189
Query: 626 XXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ + S DG++ AS G+D LWD
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Score = 234 (87.4 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 74/247 (29%), Positives = 110/247 (44%)
Query: 446 DERN-AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHP 504
DE N R L GH V + S D LS S D T+RLW L + GH
Sbjct: 48 DETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKD 107
Query: 505 VWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSD-VDCVQFHPNSN--YVAT 561
V + FS S D+ +LW T + +S+ V CV+F PNS+ + +
Sbjct: 108 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 167
Query: 562 GSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXX 621
D+ +++W+ GH + ++ S G AS G DG +WDL N
Sbjct: 168 CGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL-NEGKH 226
Query: 622 XXXXXXXDVVRALCFSRDGNIL-ASSGQDCSVKLWDF-AKLS-DEVGTEEVNLSHSADIK 678
D++ ALCFS + L A++G S+K+WD K+ DE+ E ++ S A+
Sbjct: 227 LYTLDGGDIINALCFSPNRYWLCAATGP--SIKIWDLEGKIIVDELKQEVISTSSKAEPP 284
Query: 679 N-SSLAY 684
+SLA+
Sbjct: 285 QCTSLAW 291
Score = 211 (79.3 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 63/230 (27%), Positives = 99/230 (43%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +R+ D TTR VGH V ++FS D ++S S+D TI+LW+ L C
Sbjct: 84 DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTV 142
Query: 499 KGHGHPVWD--IKFSPHGY--YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHP 554
+ H W ++FSP+ S G D++ ++W + +GH ++ V P
Sbjct: 143 QDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP 202
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+ + A+G D LWD G H+ L G + AL FS +L +A G ++ +WD
Sbjct: 203 DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI-INALCFSPNRYWLCAATGP-SIKIWD 260
Query: 615 LSNXXX---------XXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
L +L +S DG L + D V++W
Sbjct: 261 LEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVW 310
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 235 (87.8 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 64/211 (30%), Positives = 95/211 (45%)
Query: 455 TLVGHEGPVRKLSFSPD-RSLLLSCSQDNTIRLWSLLLWRCLV-----VYKGHGHPVWDI 508
TL GH G V +++ +P ++LS S+D TI +W L +GH H V D+
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 509 KFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTI 568
S G + S D RLW + R FVGH DV V F ++ + +GS D+TI
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 569 RLWDCVTGSHVRLLT-GHKAPVYALSFSV--CGRFLASAGGDGNVHMWDLSNXXXXXXXX 625
+LW+ + + H V + FS + S G D V +W+L+N
Sbjct: 130 KLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189
Query: 626 XXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ + S DG++ AS G+D LWD
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Score = 234 (87.4 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 74/247 (29%), Positives = 110/247 (44%)
Query: 446 DERN-AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHP 504
DE N R L GH V + S D LS S D T+RLW L + GH
Sbjct: 48 DETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKD 107
Query: 505 VWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSD-VDCVQFHPNSN--YVAT 561
V + FS S D+ +LW T + +S+ V CV+F PNS+ + +
Sbjct: 108 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 167
Query: 562 GSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXX 621
D+ +++W+ GH + ++ S G AS G DG +WDL N
Sbjct: 168 CGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL-NEGKH 226
Query: 622 XXXXXXXDVVRALCFSRDGNIL-ASSGQDCSVKLWDF-AKLS-DEVGTEEVNLSHSADIK 678
D++ ALCFS + L A++G S+K+WD K+ DE+ E ++ S A+
Sbjct: 227 LYTLDGGDIINALCFSPNRYWLCAATGP--SIKIWDLEGKIIVDELKQEVISTSSKAEPP 284
Query: 679 N-SSLAY 684
+SLA+
Sbjct: 285 QCTSLAW 291
Score = 211 (79.3 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 63/230 (27%), Positives = 99/230 (43%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +R+ D TTR VGH V ++FS D ++S S+D TI+LW+ L C
Sbjct: 84 DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTV 142
Query: 499 KGHGHPVWD--IKFSPHGY--YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHP 554
+ H W ++FSP+ S G D++ ++W + +GH ++ V P
Sbjct: 143 QDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP 202
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+ + A+G D LWD G H+ L G + AL FS +L +A G ++ +WD
Sbjct: 203 DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI-INALCFSPNRYWLCAATGP-SIKIWD 260
Query: 615 LSNXXX---------XXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
L +L +S DG L + D V++W
Sbjct: 261 LEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVW 310
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 235 (87.8 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 64/211 (30%), Positives = 95/211 (45%)
Query: 455 TLVGHEGPVRKLSFSPD-RSLLLSCSQDNTIRLWSLLLWRCLV-----VYKGHGHPVWDI 508
TL GH G V +++ +P ++LS S+D TI +W L +GH H V D+
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 509 KFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTI 568
S G + S D RLW + R FVGH DV V F ++ + +GS D+TI
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 569 RLWDCVTGSHVRLLT-GHKAPVYALSFSV--CGRFLASAGGDGNVHMWDLSNXXXXXXXX 625
+LW+ + + H V + FS + S G D V +W+L+N
Sbjct: 130 KLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189
Query: 626 XXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ + S DG++ AS G+D LWD
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Score = 234 (87.4 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 74/247 (29%), Positives = 110/247 (44%)
Query: 446 DERN-AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHP 504
DE N R L GH V + S D LS S D T+RLW L + GH
Sbjct: 48 DETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKD 107
Query: 505 VWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSD-VDCVQFHPNSN--YVAT 561
V + FS S D+ +LW T + +S+ V CV+F PNS+ + +
Sbjct: 108 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 167
Query: 562 GSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXX 621
D+ +++W+ GH + ++ S G AS G DG +WDL N
Sbjct: 168 CGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL-NEGKH 226
Query: 622 XXXXXXXDVVRALCFSRDGNIL-ASSGQDCSVKLWDF-AKLS-DEVGTEEVNLSHSADIK 678
D++ ALCFS + L A++G S+K+WD K+ DE+ E ++ S A+
Sbjct: 227 LYTLDGGDIINALCFSPNRYWLCAATGP--SIKIWDLEGKIIVDELKQEVISTSSKAEPP 284
Query: 679 N-SSLAY 684
+SLA+
Sbjct: 285 QCTSLAW 291
Score = 211 (79.3 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 63/230 (27%), Positives = 99/230 (43%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +R+ D TTR VGH V ++FS D ++S S+D TI+LW+ L C
Sbjct: 84 DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTV 142
Query: 499 KGHGHPVWD--IKFSPHGY--YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHP 554
+ H W ++FSP+ S G D++ ++W + +GH ++ V P
Sbjct: 143 QDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP 202
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+ + A+G D LWD G H+ L G + AL FS +L +A G ++ +WD
Sbjct: 203 DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI-INALCFSPNRYWLCAATGP-SIKIWD 260
Query: 615 LSNXXX---------XXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
L +L +S DG L + D V++W
Sbjct: 261 LEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVW 310
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 235 (87.8 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 64/211 (30%), Positives = 95/211 (45%)
Query: 455 TLVGHEGPVRKLSFSPD-RSLLLSCSQDNTIRLWSLLLWRCLV-----VYKGHGHPVWDI 508
TL GH G V +++ +P ++LS S+D TI +W L +GH H V D+
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 509 KFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTI 568
S G + S D RLW + R FVGH DV V F ++ + +GS D+TI
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 569 RLWDCVTGSHVRLLT-GHKAPVYALSFSV--CGRFLASAGGDGNVHMWDLSNXXXXXXXX 625
+LW+ + + H V + FS + S G D V +W+L+N
Sbjct: 130 KLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189
Query: 626 XXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ + S DG++ AS G+D LWD
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Score = 234 (87.4 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 74/247 (29%), Positives = 110/247 (44%)
Query: 446 DERN-AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHP 504
DE N R L GH V + S D LS S D T+RLW L + GH
Sbjct: 48 DETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKD 107
Query: 505 VWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSD-VDCVQFHPNSN--YVAT 561
V + FS S D+ +LW T + +S+ V CV+F PNS+ + +
Sbjct: 108 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 167
Query: 562 GSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXX 621
D+ +++W+ GH + ++ S G AS G DG +WDL N
Sbjct: 168 CGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL-NEGKH 226
Query: 622 XXXXXXXDVVRALCFSRDGNIL-ASSGQDCSVKLWDF-AKLS-DEVGTEEVNLSHSADIK 678
D++ ALCFS + L A++G S+K+WD K+ DE+ E ++ S A+
Sbjct: 227 LYTLDGGDIINALCFSPNRYWLCAATGP--SIKIWDLEGKIIVDELKQEVISTSSKAEPP 284
Query: 679 N-SSLAY 684
+SLA+
Sbjct: 285 QCTSLAW 291
Score = 211 (79.3 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 63/230 (27%), Positives = 99/230 (43%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +R+ D TTR VGH V ++FS D ++S S+D TI+LW+ L C
Sbjct: 84 DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTV 142
Query: 499 KGHGHPVWD--IKFSPHGY--YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHP 554
+ H W ++FSP+ S G D++ ++W + +GH ++ V P
Sbjct: 143 QDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP 202
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+ + A+G D LWD G H+ L G + AL FS +L +A G ++ +WD
Sbjct: 203 DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI-INALCFSPNRYWLCAATGP-SIKIWD 260
Query: 615 LSNXXX---------XXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
L +L +S DG L + D V++W
Sbjct: 261 LEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVW 310
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 235 (87.8 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 64/211 (30%), Positives = 95/211 (45%)
Query: 455 TLVGHEGPVRKLSFSPD-RSLLLSCSQDNTIRLWSLLLWRCLV-----VYKGHGHPVWDI 508
TL GH G V +++ +P ++LS S+D TI +W L +GH H V D+
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 509 KFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTI 568
S G + S D RLW + R FVGH DV V F ++ + +GS D+TI
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 569 RLWDCVTGSHVRLLT-GHKAPVYALSFSV--CGRFLASAGGDGNVHMWDLSNXXXXXXXX 625
+LW+ + + H V + FS + S G D V +W+L+N
Sbjct: 130 KLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189
Query: 626 XXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ + S DG++ AS G+D LWD
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Score = 234 (87.4 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 74/247 (29%), Positives = 110/247 (44%)
Query: 446 DERN-AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHP 504
DE N R L GH V + S D LS S D T+RLW L + GH
Sbjct: 48 DETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKD 107
Query: 505 VWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSD-VDCVQFHPNSN--YVAT 561
V + FS S D+ +LW T + +S+ V CV+F PNS+ + +
Sbjct: 108 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 167
Query: 562 GSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXX 621
D+ +++W+ GH + ++ S G AS G DG +WDL N
Sbjct: 168 CGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL-NEGKH 226
Query: 622 XXXXXXXDVVRALCFSRDGNIL-ASSGQDCSVKLWDF-AKLS-DEVGTEEVNLSHSADIK 678
D++ ALCFS + L A++G S+K+WD K+ DE+ E ++ S A+
Sbjct: 227 LYTLDGGDIINALCFSPNRYWLCAATGP--SIKIWDLEGKIIVDELKQEVISTSSKAEPP 284
Query: 679 N-SSLAY 684
+SLA+
Sbjct: 285 QCTSLAW 291
Score = 211 (79.3 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 63/230 (27%), Positives = 99/230 (43%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +R+ D TTR VGH V ++FS D ++S S+D TI+LW+ L C
Sbjct: 84 DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTV 142
Query: 499 KGHGHPVWD--IKFSPHGY--YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHP 554
+ H W ++FSP+ S G D++ ++W + +GH ++ V P
Sbjct: 143 QDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP 202
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+ + A+G D LWD G H+ L G + AL FS +L +A G ++ +WD
Sbjct: 203 DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI-INALCFSPNRYWLCAATGP-SIKIWD 260
Query: 615 LSNXXX---------XXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
L +L +S DG L + D V++W
Sbjct: 261 LEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVW 310
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 235 (87.8 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 64/211 (30%), Positives = 95/211 (45%)
Query: 455 TLVGHEGPVRKLSFSPD-RSLLLSCSQDNTIRLWSLLLWRCLV-----VYKGHGHPVWDI 508
TL GH G V +++ +P ++LS S+D TI +W L +GH H V D+
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 509 KFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTI 568
S G + S D RLW + R FVGH DV V F ++ + +GS D+TI
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 569 RLWDCVTGSHVRLLT-GHKAPVYALSFSV--CGRFLASAGGDGNVHMWDLSNXXXXXXXX 625
+LW+ + + H V + FS + S G D V +W+L+N
Sbjct: 130 KLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189
Query: 626 XXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ + S DG++ AS G+D LWD
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Score = 234 (87.4 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 74/247 (29%), Positives = 110/247 (44%)
Query: 446 DERN-AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHP 504
DE N R L GH V + S D LS S D T+RLW L + GH
Sbjct: 48 DETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKD 107
Query: 505 VWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSD-VDCVQFHPNSN--YVAT 561
V + FS S D+ +LW T + +S+ V CV+F PNS+ + +
Sbjct: 108 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 167
Query: 562 GSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXX 621
D+ +++W+ GH + ++ S G AS G DG +WDL N
Sbjct: 168 CGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL-NEGKH 226
Query: 622 XXXXXXXDVVRALCFSRDGNIL-ASSGQDCSVKLWDF-AKLS-DEVGTEEVNLSHSADIK 678
D++ ALCFS + L A++G S+K+WD K+ DE+ E ++ S A+
Sbjct: 227 LYTLDGGDIINALCFSPNRYWLCAATGP--SIKIWDLEGKIIVDELKQEVISTSSKAEPP 284
Query: 679 N-SSLAY 684
+SLA+
Sbjct: 285 QCTSLAW 291
Score = 211 (79.3 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 63/230 (27%), Positives = 99/230 (43%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +R+ D TTR VGH V ++FS D ++S S+D TI+LW+ L C
Sbjct: 84 DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTV 142
Query: 499 KGHGHPVWD--IKFSPHGY--YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHP 554
+ H W ++FSP+ S G D++ ++W + +GH ++ V P
Sbjct: 143 QDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP 202
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+ + A+G D LWD G H+ L G + AL FS +L +A G ++ +WD
Sbjct: 203 DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI-INALCFSPNRYWLCAATGP-SIKIWD 260
Query: 615 LSNXXX---------XXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
L +L +S DG L + D V++W
Sbjct: 261 LEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVW 310
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 235 (87.8 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 64/211 (30%), Positives = 95/211 (45%)
Query: 455 TLVGHEGPVRKLSFSPD-RSLLLSCSQDNTIRLWSLLLWRCLV-----VYKGHGHPVWDI 508
TL GH G V +++ +P ++LS S+D TI +W L +GH H V D+
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 509 KFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTI 568
S G + S D RLW + R FVGH DV V F ++ + +GS D+TI
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 569 RLWDCVTGSHVRLLT-GHKAPVYALSFSV--CGRFLASAGGDGNVHMWDLSNXXXXXXXX 625
+LW+ + + H V + FS + S G D V +W+L+N
Sbjct: 130 KLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189
Query: 626 XXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ + S DG++ AS G+D LWD
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Score = 234 (87.4 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 74/247 (29%), Positives = 110/247 (44%)
Query: 446 DERN-AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHP 504
DE N R L GH V + S D LS S D T+RLW L + GH
Sbjct: 48 DETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKD 107
Query: 505 VWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSD-VDCVQFHPNSN--YVAT 561
V + FS S D+ +LW T + +S+ V CV+F PNS+ + +
Sbjct: 108 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 167
Query: 562 GSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXX 621
D+ +++W+ GH + ++ S G AS G DG +WDL N
Sbjct: 168 CGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL-NEGKH 226
Query: 622 XXXXXXXDVVRALCFSRDGNIL-ASSGQDCSVKLWDF-AKLS-DEVGTEEVNLSHSADIK 678
D++ ALCFS + L A++G S+K+WD K+ DE+ E ++ S A+
Sbjct: 227 LYTLDGGDIINALCFSPNRYWLCAATGP--SIKIWDLEGKIIVDELKQEVISTSSKAEPP 284
Query: 679 N-SSLAY 684
+SLA+
Sbjct: 285 QCTSLAW 291
Score = 211 (79.3 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 63/230 (27%), Positives = 99/230 (43%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +R+ D TTR VGH V ++FS D ++S S+D TI+LW+ L C
Sbjct: 84 DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTV 142
Query: 499 KGHGHPVWD--IKFSPHGY--YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHP 554
+ H W ++FSP+ S G D++ ++W + +GH ++ V P
Sbjct: 143 QDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP 202
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+ + A+G D LWD G H+ L G + AL FS +L +A G ++ +WD
Sbjct: 203 DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI-INALCFSPNRYWLCAATGP-SIKIWD 260
Query: 615 LSNXXX---------XXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
L +L +S DG L + D V++W
Sbjct: 261 LEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVW 310
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 235 (87.8 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 64/211 (30%), Positives = 95/211 (45%)
Query: 455 TLVGHEGPVRKLSFSPD-RSLLLSCSQDNTIRLWSLLLWRCLV-----VYKGHGHPVWDI 508
TL GH G V +++ +P ++LS S+D TI +W L +GH H V D+
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 509 KFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTI 568
S G + S D RLW + R FVGH DV V F ++ + +GS D+TI
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 569 RLWDCVTGSHVRLLT-GHKAPVYALSFSV--CGRFLASAGGDGNVHMWDLSNXXXXXXXX 625
+LW+ + + H V + FS + S G D V +W+L+N
Sbjct: 130 KLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189
Query: 626 XXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ + S DG++ AS G+D LWD
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Score = 234 (87.4 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 74/247 (29%), Positives = 110/247 (44%)
Query: 446 DERN-AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHP 504
DE N R L GH V + S D LS S D T+RLW L + GH
Sbjct: 48 DETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKD 107
Query: 505 VWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSD-VDCVQFHPNSN--YVAT 561
V + FS S D+ +LW T + +S+ V CV+F PNS+ + +
Sbjct: 108 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 167
Query: 562 GSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXX 621
D+ +++W+ GH + ++ S G AS G DG +WDL N
Sbjct: 168 CGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL-NEGKH 226
Query: 622 XXXXXXXDVVRALCFSRDGNIL-ASSGQDCSVKLWDF-AKLS-DEVGTEEVNLSHSADIK 678
D++ ALCFS + L A++G S+K+WD K+ DE+ E ++ S A+
Sbjct: 227 LYTLDGGDIINALCFSPNRYWLCAATGP--SIKIWDLEGKIIVDELKQEVISTSSKAEPP 284
Query: 679 N-SSLAY 684
+SLA+
Sbjct: 285 QCTSLAW 291
Score = 211 (79.3 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 63/230 (27%), Positives = 99/230 (43%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +R+ D TTR VGH V ++FS D ++S S+D TI+LW+ L C
Sbjct: 84 DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTV 142
Query: 499 KGHGHPVWD--IKFSPHGY--YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHP 554
+ H W ++FSP+ S G D++ ++W + +GH ++ V P
Sbjct: 143 QDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP 202
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+ + A+G D LWD G H+ L G + AL FS +L +A G ++ +WD
Sbjct: 203 DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI-INALCFSPNRYWLCAATGP-SIKIWD 260
Query: 615 LSNXXX---------XXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
L +L +S DG L + D V++W
Sbjct: 261 LEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVW 310
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 235 (87.8 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 64/211 (30%), Positives = 95/211 (45%)
Query: 455 TLVGHEGPVRKLSFSPD-RSLLLSCSQDNTIRLWSLLLWRCLV-----VYKGHGHPVWDI 508
TL GH G V +++ +P ++LS S+D TI +W L +GH H V D+
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 509 KFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTI 568
S G + S D RLW + R FVGH DV V F ++ + +GS D+TI
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 569 RLWDCVTGSHVRLLT-GHKAPVYALSFSV--CGRFLASAGGDGNVHMWDLSNXXXXXXXX 625
+LW+ + + H V + FS + S G D V +W+L+N
Sbjct: 130 KLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189
Query: 626 XXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ + S DG++ AS G+D LWD
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Score = 234 (87.4 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 74/247 (29%), Positives = 110/247 (44%)
Query: 446 DERN-AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHP 504
DE N R L GH V + S D LS S D T+RLW L + GH
Sbjct: 48 DETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKD 107
Query: 505 VWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSD-VDCVQFHPNSN--YVAT 561
V + FS S D+ +LW T + +S+ V CV+F PNS+ + +
Sbjct: 108 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 167
Query: 562 GSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXX 621
D+ +++W+ GH + ++ S G AS G DG +WDL N
Sbjct: 168 CGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL-NEGKH 226
Query: 622 XXXXXXXDVVRALCFSRDGNIL-ASSGQDCSVKLWDF-AKLS-DEVGTEEVNLSHSADIK 678
D++ ALCFS + L A++G S+K+WD K+ DE+ E ++ S A+
Sbjct: 227 LYTLDGGDIINALCFSPNRYWLCAATGP--SIKIWDLEGKIIVDELKQEVISTSSKAEPP 284
Query: 679 N-SSLAY 684
+SLA+
Sbjct: 285 QCTSLAW 291
Score = 211 (79.3 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 63/230 (27%), Positives = 99/230 (43%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +R+ D TTR VGH V ++FS D ++S S+D TI+LW+ L C
Sbjct: 84 DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTV 142
Query: 499 KGHGHPVWD--IKFSPHGY--YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHP 554
+ H W ++FSP+ S G D++ ++W + +GH ++ V P
Sbjct: 143 QDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP 202
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+ + A+G D LWD G H+ L G + AL FS +L +A G ++ +WD
Sbjct: 203 DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI-INALCFSPNRYWLCAATGP-SIKIWD 260
Query: 615 LSNXXX---------XXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
L +L +S DG L + D V++W
Sbjct: 261 LEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVW 310
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 261 (96.9 bits), Expect = 9.4e-19, P = 9.4e-19
Identities = 57/220 (25%), Positives = 97/220 (44%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
DD V + + +L GH PV ++F+ + L+L+ + I+LW L + +
Sbjct: 36 DDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRA 95
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
+ GH ++F P G + AS D R+W T ++ + GH + ++F P+
Sbjct: 96 FTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGR 155
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
+V +G D +++WD G + H+ P+ +L F LA+ D V WDL
Sbjct: 156 WVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLET 215
Query: 618 XXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDF 657
VRA+ F DG L G D +K++ +
Sbjct: 216 FELIGTTRPEATGVRAIAFHPDGQTLFC-GLDDGLKVYSW 254
Score = 255 (94.8 bits), Expect = 4.2e-18, P = 4.2e-18
Identities = 63/211 (29%), Positives = 96/211 (45%)
Query: 457 VGHEGPVRKLSFSPDRS-LLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGY 515
V H G V LS S LLL+ D + LWS+ + GH PV + F+
Sbjct: 12 VAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFNSEEV 71
Query: 516 YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT 575
+ + +LW + +R F GH S+ V+FHP ++A+GSSD +R+WD
Sbjct: 72 LVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRK 131
Query: 576 GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALC 635
++ GH + + FS GR++ S G D V +WDL+ +R+L
Sbjct: 132 KGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLD 191
Query: 636 FSRDGNILASSGQDCSVKLWDFAKLSDEVGT 666
F +LA+ D +VK WD + +GT
Sbjct: 192 FHPLEFLLATGSADRTVKFWDLETF-ELIGT 221
Score = 172 (65.6 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 49/191 (25%), Positives = 81/191 (42%)
Query: 396 SEDVSILAVGFSESYIKLWSLVPQKL-KAMKSS-DQLQDIEME---------CDDILVRI 444
SE+V +LA G S IKLW L K+ +A +E D +R+
Sbjct: 68 SEEVLVLA-GASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRV 126
Query: 445 MDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHP 504
D R +T GH + + FSPD ++S DN +++W L + L +K H P
Sbjct: 127 WDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGP 186
Query: 505 VWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSS 564
+ + F P + A+ DR + W +++ + + V + FHP+ + G
Sbjct: 187 IRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLD 246
Query: 565 DRT-IRLWDCV 574
D + W+ V
Sbjct: 247 DGLKVYSWEPV 257
Score = 136 (52.9 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 42/173 (24%), Positives = 73/173 (42%)
Query: 535 HPLRLFVGHYSDVDCVQF-HPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALS 593
+ L+ FV H +V+C+ S + TG D + LW + L GH +PV +++
Sbjct: 6 YKLQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVA 65
Query: 594 FSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVK 653
F+ + + G + +WDL A+ F G LAS D +++
Sbjct: 66 FNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLR 125
Query: 654 LWDFAK---LSDEVG-TEEVN-LSHSAD---IKNSSLAYLVRSYKTKASPLLH 698
+WD K + G T ++ + S D + + L +V+ + A LLH
Sbjct: 126 VWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLH 178
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 234 (87.4 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 61/226 (26%), Positives = 102/226 (45%)
Query: 439 DILVRIM---DERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCL 495
D LV++ DE+ E TL GH+ V ++ S + ++ S S D IRLW L + +
Sbjct: 41 DDLVKVWKWSDEK-LELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQI 99
Query: 496 VVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPN 555
W + FSP Y A+ H ++ +S + + + P+
Sbjct: 100 KSMDAGPVDAWTVAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPD 159
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
Y+A+G+ D I ++D TG + L GH P+ +L+FS + L +A DG + ++D+
Sbjct: 160 GKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Query: 616 SNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAKLS 661
+ V ++ FS D SS D S+K+WD + S
Sbjct: 220 QHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRS 265
Score = 214 (80.4 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 42/135 (31%), Positives = 68/135 (50%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D ++ I D + TL GH P+R L+FSPD LL++ S D I+++ +
Sbjct: 169 DGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTL 228
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
GHG V + FSP +F S+ D+ ++W T S + F H V V+++P +
Sbjct: 229 SGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSK 288
Query: 559 VATGSSDRTIRLWDC 573
+ + DR I ++DC
Sbjct: 289 IVSAGDDRAIHIYDC 303
Score = 197 (74.4 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 58/245 (23%), Positives = 109/245 (44%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK-LKAMKSSD-QLQDIEMECD 438
+TL + V IS++ +I A +++I+LW L K +K+M + + D
Sbjct: 58 WTLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPD 117
Query: 439 DIL---------VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL 489
V I + + +L + +++SPD L S + D I ++ +
Sbjct: 118 SKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 490 LLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC 549
+ L +GH P+ + FSP +A D +++ + GH S V
Sbjct: 178 ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLS 237
Query: 550 VQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGN 609
V F P+ + + SSD++I++WD + S V H+ V+++ ++ G + SAG D
Sbjct: 238 VAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRA 297
Query: 610 VHMWD 614
+H++D
Sbjct: 298 IHIYD 302
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 256 (95.2 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 76/277 (27%), Positives = 128/277 (46%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQK-LKAMKS------SDQLQD--IEMECDDI 440
+TC + + I++ G ++ +K+WS V K L+ + S Q++D I D
Sbjct: 306 ITCLQFCGN-RIVS-GSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDR 363
Query: 441 LVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKG 500
+++ + E TL GH VR + R ++S S+D T+R+W + +CL V G
Sbjct: 364 TLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMG 421
Query: 501 HGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVA 560
H V +++ G S +D M ++W ++ L GH + V +QF + +V
Sbjct: 422 HVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVV 477
Query: 561 TGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXX 620
+GS D +IR+WD TG+ + LTGH++ + L S D V +WD+
Sbjct: 478 SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQC 535
Query: 621 XXXXXXXXDVVRAL-CFSRDGNILASSGQDCSVKLWD 656
A+ C + N + +S D +VKLWD
Sbjct: 536 LQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLWD 572
Score = 238 (88.8 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 62/204 (30%), Positives = 95/204 (46%)
Query: 454 RTLVGHEGPVRK-LSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSP 512
+ L GH+ V L F +R ++S S DNT+++WS + +CL GH VW +
Sbjct: 296 KVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD 353
Query: 513 HGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWD 572
+ S DR ++W ++ + GH S V C+ H V +GS D T+R+WD
Sbjct: 354 N--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWD 409
Query: 573 CVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVR 632
TG + +L GH A V + + GR + S D V +WD + V
Sbjct: 410 IETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 467
Query: 633 ALCFSRDGNILASSGQDCSVKLWD 656
+L F DG + S D S+++WD
Sbjct: 468 SLQF--DGIHVVSGSLDTSIRVWD 489
Score = 198 (74.8 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 47/180 (26%), Positives = 88/180 (48%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +R+ D + L+GH VR + + R ++S + D +++W CL
Sbjct: 402 DATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPETETCLHTL 459
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
+GH + V+ ++F G + S D R+W ++ + + GH S ++ N
Sbjct: 460 QGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNI 515
Query: 559 VATGSSDRTIRLWDCVTGSHVRLLTG---HKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
+ +G++D T+++WD TG ++ L G H++ V L F+ F+ ++ DG V +WDL
Sbjct: 516 LVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNK--NFVITSSDDGTVKLWDL 573
Score = 170 (64.9 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 45/147 (30%), Positives = 66/147 (44%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +V++ D TL GH V L F D ++S S D +IR+W + C+
Sbjct: 442 DFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTL 499
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVG---HYSDVDCVQFHPN 555
GH ++ + S D ++W + L+ G H S V C+QF N
Sbjct: 500 TGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQF--N 555
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVRLL 582
N+V T S D T++LWD TG +R L
Sbjct: 556 KNFVITSSDDGTVKLWDLKTGEFIRNL 582
Score = 147 (56.8 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 62/258 (24%), Positives = 107/258 (41%)
Query: 414 WSLVPQKLKAMKSSDQLQDIEMECDDI--LVRIMDERNAETTRTLVGHEGPVRKLSFSPD 471
WS P+KL A+ D+L D E + ++++++ + +L+ E + LSF
Sbjct: 166 WS-GPEKLLAL---DELID-SCEPTQVKHMMQVIEPQFQRDFISLLPKELALYVLSFLEP 220
Query: 472 RSLLLSCSQDNTIRLWSLL-----LWRCLVVYKGHGHP--VWDIKFSPHGYYFA--SAGH 522
+ LL + T R W +L LWR +G P + K G+ + + +
Sbjct: 221 KDLLQAAQ---TCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKIIKPGFIHSPWKSAY 277
Query: 523 DRMARL---WATDSYHPLRLFVGHYSDV-DCVQFHPNSNYVATGSSDRTIRLWDCVTGSH 578
R R+ W ++ GH V C+QF N + +GS D T+++W VTG
Sbjct: 278 IRQHRIDTNWRRGELRSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKC 335
Query: 579 VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSR 638
+R L GH V+ S + + S D + +W+ VR C
Sbjct: 336 LRTLVGHTGGVW--SSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMHL 391
Query: 639 DGNILASSGQDCSVKLWD 656
+ S +D ++++WD
Sbjct: 392 HEKRVVSGSRDATLRVWD 409
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 257 (95.5 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 66/242 (27%), Positives = 103/242 (42%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
DD V + +L GH P+ L S L+++ SQ +IR+W L + L
Sbjct: 41 DDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRT 100
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
GH + + F P+G + AS D +LW + + H V C++F P+
Sbjct: 101 LLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGK 160
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
++A+ + D T++LWD G + TGH PV + F LA + + WDL
Sbjct: 161 WLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSEYPLAGSPVHRTIRFWDLEK 220
Query: 618 XXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKL--WDFAKLSDEVGTEEVNLSHSA 675
VR + F+ DG L QD S+++ W+ + D V VN A
Sbjct: 221 FHVVSCIEEEATPVRCILFNPDGCCLYGGFQD-SLRVYGWEPERCFDVV---VVNWGKVA 276
Query: 676 DI 677
D+
Sbjct: 277 DL 278
Score = 223 (83.6 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 56/213 (26%), Positives = 91/213 (42%)
Query: 448 RNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNT-IRLWSLLLWRCLVVYKGHGHPVW 506
+ A + +V H V L LL+ D+ + +WS+ C++ GH P+
Sbjct: 8 KTAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIE 67
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
++ S + R+W ++ LR +GH +++ + FHP ++VA+GS D
Sbjct: 68 SLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDT 127
Query: 567 TIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXX 626
I+LWD + H V L FS G++LASA D V +WDL+
Sbjct: 128 DIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTG 187
Query: 627 XXDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659
V + F LA S +++ WD K
Sbjct: 188 HYGPVNVVEFHPSEYPLAGSPVHRTIRFWDLEK 220
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 259 (96.2 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 66/219 (30%), Positives = 100/219 (45%)
Query: 433 IEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLW 492
I C D+ + I+D ++ T+ G + L+ SPD LL S IR+W L
Sbjct: 34 IACACGDV-INIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETL 92
Query: 493 RCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQF 552
+C+ +KGH PV + G A+AG DR +W D F GH V + F
Sbjct: 93 KCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILF 152
Query: 553 HP--NSNYVATGSSDRTIRLWDCVTGSHVR----LLTGHKAPVYALSFSVCGRFLASAGG 606
HP N N + +GS D T+R+WD + + ++ H + V +++ S G L SAG
Sbjct: 153 HPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGR 212
Query: 607 DGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILAS 645
D V++WDL + +V+ A+ G AS
Sbjct: 213 DKVVNLWDLHDYSCKATVATY-EVLEAVTTVSSGTPFAS 250
Score = 208 (78.3 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 62/259 (23%), Positives = 108/259 (41%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDR-SLLLSCSQDNTIRLWSL-------- 489
D VR+ + + GH G + ++F+ S +S S D T+++WSL
Sbjct: 425 DKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSE 484
Query: 490 --LLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWAT-DSYHPLRLFVGHYSD 546
+ + V H + + + + + DR A +W D H + L GH
Sbjct: 485 EPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTL-KGHKRR 543
Query: 547 VDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGG 606
+ V+F V T S D+T+++W GS ++ GH + V SF G S G
Sbjct: 544 IFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGA 603
Query: 607 DGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSD---E 663
DG + +W+++ D V AL + ++A+ G D + LW + SD +
Sbjct: 604 DGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLWHDSTASDKEDD 663
Query: 664 VGTEEVNLSHSADIKNSSL 682
EE + +++N+ L
Sbjct: 664 FRKEEEAILRGQELENAVL 682
Score = 182 (69.1 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 56/204 (27%), Positives = 83/204 (40%)
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
+G + + SP SAGH R R+W ++ +R + GH V + H +
Sbjct: 57 EGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGL 116
Query: 559 VATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGR--FLASAGGDGNVHMWDLS 616
+AT +DR + +WD G GHK V ++ F L S D V +WDL+
Sbjct: 117 LATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLN 176
Query: 617 NXXXXXXXXXXXD----VVRALCFSRDGNILASSGQDCSVKLWDFAKLSDE--VGTEEVN 670
+ V ++ S DG L S+G+D V LWD S + V T EV
Sbjct: 177 AKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYSCKATVATYEVL 236
Query: 671 LSHSADIKNSSLAYLVRSYKTKAS 694
+ + + A V S K S
Sbjct: 237 EAVTTVSSGTPFASFVASLDQKKS 260
Score = 125 (49.1 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 53/253 (20%), Positives = 102/253 (40%)
Query: 421 LKAMKSSDQLQDIEMECDDILVRIMDERNAE--TTRTLVGHEGPVRKLSFSPDRSLLLSC 478
++ KS + E + DI V DE + T ++ + + L + D+
Sbjct: 281 VRIWKSEGSICLYEQKSSDITVSSDDEESKRGFTAAAMLPSDHGL--LCVTADQQFFFYS 338
Query: 479 SQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKF-SPHGYYFASAGHDRMARLWATDSYHPL 537
+N + L+L + LV G+ + D+KF + A A + R++ +
Sbjct: 339 VVEN-VEETELVLSKRLV---GYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATMSCS 394
Query: 538 RLFVGHYSDV----DCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALS 593
+ GH V CV N + TGS D+T+RLW+ + S + + TGH + A++
Sbjct: 395 YVLAGHKEVVLSLDTCVSSSGNV-LIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVA 453
Query: 594 FSVCG-RFLASAGGDGNVHMWDLS----------NXXXXXXXXXXXDVVRALCFSRDGNI 642
F+ F S GD + +W L N + ++ +R+ ++
Sbjct: 454 FAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSL 513
Query: 643 LASSGQDCSVKLW 655
+ + +D + +W
Sbjct: 514 VCTGSEDRTASIW 526
Score = 48 (22.0 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 20/76 (26%), Positives = 33/76 (43%)
Query: 351 DSEKIDKLKALREATKRV-TLGPESLPSIACYTLLNAR-QQVTCAEISED-VSILAVGFS 407
DS K + +AT RV L ++ C ++ VT +SED +++ + G
Sbjct: 155 DSNKNILISGSDDATVRVWDLNAKNTEK-KCLAIMEKHFSAVTSIALSEDGLTLFSAG-R 212
Query: 408 ESYIKLWSLVPQKLKA 423
+ + LW L KA
Sbjct: 213 DKVVNLWDLHDYSCKA 228
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 256 (95.2 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 76/277 (27%), Positives = 128/277 (46%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQK-LKAMKS------SDQLQD--IEMECDDI 440
+TC + + I++ G ++ +K+WS V K L+ + S Q++D I D
Sbjct: 306 ITCLQFCGN-RIVS-GSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDR 363
Query: 441 LVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKG 500
+++ + E TL GH VR + R ++S S+D T+R+W + +CL V G
Sbjct: 364 TLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMG 421
Query: 501 HGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVA 560
H V +++ G S +D M ++W ++ L GH + V +QF + +V
Sbjct: 422 HVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVV 477
Query: 561 TGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXX 620
+GS D +IR+WD TG+ + LTGH++ + L S D V +WD+
Sbjct: 478 SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQC 535
Query: 621 XXXXXXXXDVVRAL-CFSRDGNILASSGQDCSVKLWD 656
A+ C + N + +S D +VKLWD
Sbjct: 536 LQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLWD 572
Score = 239 (89.2 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 62/207 (29%), Positives = 97/207 (46%)
Query: 451 ETTRTLVGHEGPVRK-LSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIK 509
++ + L GH+ V L F +R ++S S DNT+++WS + +CL GH VW +
Sbjct: 293 KSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 350
Query: 510 FSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIR 569
+ S DR ++W ++ + GH S V C+ H V +GS D T+R
Sbjct: 351 MRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLR 406
Query: 570 LWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXD 629
+WD TG + +L GH A V + + GR + S D V +WD +
Sbjct: 407 VWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTN 464
Query: 630 VVRALCFSRDGNILASSGQDCSVKLWD 656
V +L F DG + S D S+++WD
Sbjct: 465 RVYSLQF--DGIHVVSGSLDTSIRVWD 489
Score = 198 (74.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 47/180 (26%), Positives = 88/180 (48%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +R+ D + L+GH VR + + R ++S + D +++W CL
Sbjct: 402 DATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPETETCLHTL 459
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
+GH + V+ ++F G + S D R+W ++ + + GH S ++ N
Sbjct: 460 QGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNI 515
Query: 559 VATGSSDRTIRLWDCVTGSHVRLLTG---HKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
+ +G++D T+++WD TG ++ L G H++ V L F+ F+ ++ DG V +WDL
Sbjct: 516 LVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNK--NFVITSSDDGTVKLWDL 573
Score = 170 (64.9 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 45/147 (30%), Positives = 66/147 (44%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +V++ D TL GH V L F D ++S S D +IR+W + C+
Sbjct: 442 DFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTL 499
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVG---HYSDVDCVQFHPN 555
GH ++ + S D ++W + L+ G H S V C+QF N
Sbjct: 500 TGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQF--N 555
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVRLL 582
N+V T S D T++LWD TG +R L
Sbjct: 556 KNFVITSSDDGTVKLWDLKTGEFIRNL 582
Score = 146 (56.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 62/258 (24%), Positives = 107/258 (41%)
Query: 414 WSLVPQKLKAMKSSDQLQDIEMECDDI--LVRIMDERNAETTRTLVGHEGPVRKLSFSPD 471
WS P+KL A+ D+L D E + ++++++ + +L+ E + LSF
Sbjct: 166 WS-GPEKLLAL---DELID-SCEPTQVKHMMQVIEPQFQRDFISLLPKELALYVLSFLEP 220
Query: 472 RSLLLSCSQDNTIRLWSLL-----LWRCLVVYKGHGHP--VWDIKFSPHGYYFA--SAGH 522
+ LL + T R W +L LWR +G P + K G+ + + +
Sbjct: 221 KDLLQAAQ---TCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKIIKPGFIHSPWKSAY 277
Query: 523 DRMARL---WATDSYHPLRLFVGHYSDV-DCVQFHPNSNYVATGSSDRTIRLWDCVTGSH 578
R R+ W ++ GH V C+QF N + +GS D T+++W VTG
Sbjct: 278 IRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKC 335
Query: 579 VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSR 638
+R L GH V+ S + + S D + +W+ VR C
Sbjct: 336 LRTLVGHTGGVW--SSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMHL 391
Query: 639 DGNILASSGQDCSVKLWD 656
+ S +D ++++WD
Sbjct: 392 HEKRVVSGSRDATLRVWD 409
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 254 (94.5 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 94/323 (29%), Positives = 143/323 (44%)
Query: 371 GPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMK----- 425
G +L I C + N++ V C + +D I++ G ++ IK+W Q L+ +K
Sbjct: 211 GRHNLQRIQCRSE-NSKG-VYCLQY-DDEKIIS-GLRDNSIKIWD--KQTLECLKILTGH 264
Query: 426 --SSDQLQ-D---IEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCS 479
S LQ D I D VR+ D + E TL+ H V L F L+++CS
Sbjct: 265 TGSVLCLQYDERVIVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRFC--NGLMVTCS 322
Query: 480 QDNTIRLWSLL------LWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDS 533
+D +I +W + L R LV GH V + F Y SA DR ++W+T +
Sbjct: 323 KDRSIAVWDMASPTDISLRRVLV---GHRAAVNVVDFDDK--YIVSASGDRTIKVWSTST 377
Query: 534 YHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALS 593
+R GH + C+Q+ V +GSSD TIRLWD G+ +R+L GH+ V +
Sbjct: 378 CEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIR 435
Query: 594 FSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNI---------LA 644
F + + S DG + +WDL +R L G + +
Sbjct: 436 FD--NKRIVSGAYDGKIKVWDLQAALDPRAPASTL-CLRTLV-EHSGRVFRLQFDEFQII 491
Query: 645 SSGQDCSVKLWDFAKLSDEVGTE 667
SS D ++ +WDF +S TE
Sbjct: 492 SSSHDDTILIWDFLNVSTNGQTE 514
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 255 (94.8 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 62/204 (30%), Positives = 94/204 (46%)
Query: 456 LVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGY 515
L GHE V D +L++ S DNT+++W + + GH VW + S G
Sbjct: 251 LRGHEDHVITCMQIHD-DVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGR 309
Query: 516 YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT 575
Y S DR ++W+T L GH S V C+ + + TGS D T+R+WD +
Sbjct: 310 YIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDVES 367
Query: 576 GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALC 635
G H+ L GH A V + F G + S G D V +W+ + V +L
Sbjct: 368 GRHLATLHGHHAAVRCVQFD--GTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLL 425
Query: 636 FSRDGNILASSGQDCSVKLWDFAK 659
F + +I+ S D S+++WDF +
Sbjct: 426 FESERSIVCSGSLDTSIRVWDFTR 449
Score = 243 (90.6 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 77/285 (27%), Positives = 125/285 (43%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSL----VPQKLKAMKS---SDQLQD----IEMECD 438
+TC +I +DV L G ++ +K+W + V L + Q+ I
Sbjct: 259 ITCMQIHDDV--LVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGST 316
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D V++ + TL GH VR ++ + S+L++ S+D T+R+W + R L
Sbjct: 317 DRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAG--SILVTGSRDTTLRVWDVESGRHLATL 374
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
GH V ++F G S G+D ++W + +R GH + V + F +
Sbjct: 375 HGHHAAVRCVQFD--GTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSI 432
Query: 559 VATGSSDRTIRLWDCVT--GSH-VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
V +GS D +IR+WD G V LL GH + + G L S D +V +WD+
Sbjct: 433 VCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLR--GNILVSCNADSHVRVWDI 490
Query: 616 SNXXXXXXXXXXXDVVRAL-CFSRDGNILASSGQDCSVKLWDFAK 659
+ +L F R N++A+S D +VKLWD +
Sbjct: 491 HEGTCVHMLSGHRSAITSLQWFGR--NMVATSSDDGTVKLWDIER 533
Score = 209 (78.6 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 63/248 (25%), Positives = 111/248 (44%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKL-KAMKSSDQLQDIEMECDD 439
YTL+ V ++IS+ + G ++ +K+WS V L ++
Sbjct: 290 YTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGS 349
Query: 440 ILV--------RIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLL 491
ILV R+ D + TL GH VR + F D + ++S D T+++W+
Sbjct: 350 ILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHT 407
Query: 492 WRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLW---ATDSYHPLRLFVGHYSDVD 548
RC+ GH + V+ + F S D R+W + + L GH S
Sbjct: 408 GRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTS 467
Query: 549 CVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGR-FLASAGGD 607
+Q N + + ++D +R+WD G+ V +L+GH++ + +L + GR +A++ D
Sbjct: 468 GMQLR--GNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWF--GRNMVATSSDD 523
Query: 608 GNVHMWDL 615
G V +WD+
Sbjct: 524 GTVKLWDI 531
Score = 185 (70.2 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 43/161 (26%), Positives = 71/161 (44%)
Query: 497 VYKGH-GHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPN 555
V +GH H + ++ H + D ++W D + VGH V Q
Sbjct: 250 VLRGHEDHVITCMQI--HDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQC 307
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
Y+ +GS+DRT+++W V GS + L GH + V ++ + G L + D + +WD+
Sbjct: 308 GRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDV 365
Query: 616 SNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ VR C DG + S G D +VK+W+
Sbjct: 366 ESGRHLATLHGHHAAVR--CVQFDGTTVVSGGYDFTVKIWN 404
Score = 170 (64.9 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 45/149 (30%), Positives = 68/149 (45%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLL---WRCL 495
D V+I + RTL GH V L F +RS++ S S D +IR+W C+
Sbjct: 397 DFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECV 456
Query: 496 VVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPN 555
+ +GH ++ G S D R+W + + GH S + +Q+
Sbjct: 457 ALLQGHTSLTSGMQL--RGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWF-G 513
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVR-LLT 583
N VAT S D T++LWD G+ +R L+T
Sbjct: 514 RNMVATSSDDGTVKLWDIERGALIRDLVT 542
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 255 (94.8 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 62/204 (30%), Positives = 94/204 (46%)
Query: 456 LVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGY 515
L GHE V D +L++ S DNT+++W + + GH VW + S G
Sbjct: 251 LRGHEDHVITCMQIHD-DVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGR 309
Query: 516 YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT 575
Y S DR ++W+T L GH S V C+ + + TGS D T+R+WD +
Sbjct: 310 YIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDVES 367
Query: 576 GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALC 635
G H+ L GH A V + F G + S G D V +W+ + V +L
Sbjct: 368 GRHLATLHGHHAAVRCVQFD--GTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLL 425
Query: 636 FSRDGNILASSGQDCSVKLWDFAK 659
F + +I+ S D S+++WDF +
Sbjct: 426 FESERSIVCSGSLDTSIRVWDFTR 449
Score = 243 (90.6 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 77/285 (27%), Positives = 125/285 (43%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSL----VPQKLKAMKS---SDQLQD----IEMECD 438
+TC +I +DV L G ++ +K+W + V L + Q+ I
Sbjct: 259 ITCMQIHDDV--LVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGST 316
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D V++ + TL GH VR ++ + S+L++ S+D T+R+W + R L
Sbjct: 317 DRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAG--SILVTGSRDTTLRVWDVESGRHLATL 374
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
GH V ++F G S G+D ++W + +R GH + V + F +
Sbjct: 375 HGHHAAVRCVQFD--GTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSI 432
Query: 559 VATGSSDRTIRLWDCVT--GSH-VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
V +GS D +IR+WD G V LL GH + + G L S D +V +WD+
Sbjct: 433 VCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLR--GNILVSCNADSHVRVWDI 490
Query: 616 SNXXXXXXXXXXXDVVRAL-CFSRDGNILASSGQDCSVKLWDFAK 659
+ +L F R N++A+S D +VKLWD +
Sbjct: 491 HEGTCVHMLSGHRSAITSLQWFGR--NMVATSSDDGTVKLWDIER 533
Score = 209 (78.6 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 63/248 (25%), Positives = 111/248 (44%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKL-KAMKSSDQLQDIEMECDD 439
YTL+ V ++IS+ + G ++ +K+WS V L ++
Sbjct: 290 YTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGS 349
Query: 440 ILV--------RIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLL 491
ILV R+ D + TL GH VR + F D + ++S D T+++W+
Sbjct: 350 ILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHT 407
Query: 492 WRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLW---ATDSYHPLRLFVGHYSDVD 548
RC+ GH + V+ + F S D R+W + + L GH S
Sbjct: 408 GRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTS 467
Query: 549 CVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGR-FLASAGGD 607
+Q N + + ++D +R+WD G+ V +L+GH++ + +L + GR +A++ D
Sbjct: 468 GMQLR--GNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWF--GRNMVATSSDD 523
Query: 608 GNVHMWDL 615
G V +WD+
Sbjct: 524 GTVKLWDI 531
Score = 185 (70.2 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 43/161 (26%), Positives = 71/161 (44%)
Query: 497 VYKGH-GHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPN 555
V +GH H + ++ H + D ++W D + VGH V Q
Sbjct: 250 VLRGHEDHVITCMQI--HDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQC 307
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
Y+ +GS+DRT+++W V GS + L GH + V ++ + G L + D + +WD+
Sbjct: 308 GRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDV 365
Query: 616 SNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ VR C DG + S G D +VK+W+
Sbjct: 366 ESGRHLATLHGHHAAVR--CVQFDGTTVVSGGYDFTVKIWN 404
Score = 170 (64.9 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 45/149 (30%), Positives = 68/149 (45%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLL---WRCL 495
D V+I + RTL GH V L F +RS++ S S D +IR+W C+
Sbjct: 397 DFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECV 456
Query: 496 VVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPN 555
+ +GH ++ G S D R+W + + GH S + +Q+
Sbjct: 457 ALLQGHTSLTSGMQL--RGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWF-G 513
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVR-LLT 583
N VAT S D T++LWD G+ +R L+T
Sbjct: 514 RNMVATSSDDGTVKLWDIERGALIRDLVT 542
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 255 (94.8 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 76/277 (27%), Positives = 128/277 (46%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQK-LKAMKS------SDQLQD--IEMECDDI 440
+TC + + I++ G ++ +K+WS V K L+ + S Q++D I D
Sbjct: 264 ITCLQFCGN-RIVS-GSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDR 321
Query: 441 LVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKG 500
+++ + E TL GH VR + R ++S S+D T+R+W + +CL V G
Sbjct: 322 TLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMG 379
Query: 501 HGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVA 560
H V +++ G S +D M ++W ++ L GH + V +QF + +V
Sbjct: 380 HVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVV 435
Query: 561 TGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXX 620
+GS D +IR+WD TG+ + LTGH++ + L S D V +WD+
Sbjct: 436 SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQC 493
Query: 621 XXXXXXXXDVVRAL-CFSRDGNILASSGQDCSVKLWD 656
A+ C + N + +S D +VKLWD
Sbjct: 494 LQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWD 530
Score = 239 (89.2 bits), Expect = 8.8e-17, P = 8.8e-17
Identities = 62/207 (29%), Positives = 97/207 (46%)
Query: 451 ETTRTLVGHEGPVRK-LSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIK 509
++ + L GH+ V L F +R ++S S DNT+++WS + +CL GH VW +
Sbjct: 251 KSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 308
Query: 510 FSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIR 569
+ S DR ++W ++ + GH S V C+ H V +GS D T+R
Sbjct: 309 MRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLR 364
Query: 570 LWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXD 629
+WD TG + +L GH A V + + GR + S D V +WD +
Sbjct: 365 VWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTN 422
Query: 630 VVRALCFSRDGNILASSGQDCSVKLWD 656
V +L F DG + S D S+++WD
Sbjct: 423 RVYSLQF--DGIHVVSGSLDTSIRVWD 447
Score = 198 (74.8 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 47/180 (26%), Positives = 88/180 (48%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +R+ D + L+GH VR + + R ++S + D +++W CL
Sbjct: 360 DATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPETETCLHTL 417
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
+GH + V+ ++F G + S D R+W ++ + + GH S ++ N
Sbjct: 418 QGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNI 473
Query: 559 VATGSSDRTIRLWDCVTGSHVRLLTG---HKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
+ +G++D T+++WD TG ++ L G H++ V L F+ F+ ++ DG V +WDL
Sbjct: 474 LVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKLWDL 531
Score = 170 (64.9 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 45/147 (30%), Positives = 66/147 (44%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +V++ D TL GH V L F D ++S S D +IR+W + C+
Sbjct: 400 DFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTL 457
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVG---HYSDVDCVQFHPN 555
GH ++ + S D ++W + L+ G H S V C+QF N
Sbjct: 458 TGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF--N 513
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVRLL 582
N+V T S D T++LWD TG +R L
Sbjct: 514 KNFVITSSDDGTVKLWDLKTGEFIRNL 540
Score = 148 (57.2 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 65/260 (25%), Positives = 109/260 (41%)
Query: 414 WSLVPQKLKAMKSSDQLQDIEMECDDI--LVRIMDERNAETTRTLVGHEGPVRKLSFSPD 471
WS P+KL A+ D+L D E + ++++++ + +L+ E + LSF
Sbjct: 124 WS-GPEKLLAL---DELID-SCEPTQVKHMMQVIEPQFQRDFISLLPKELALYVLSFLEP 178
Query: 472 RSLLLSCSQDNTIRLWSLL-----LWRCLVVYKGHGHPVWDIK----FSPHGYYFA--SA 520
R LL + T R W +L LWR +G P+ IK P G+ + +
Sbjct: 179 RDLLQAAQ---TCRYWRILAEDNLLWREKCKEEGIDEPL-HIKRRKVIKP-GFIHSPWKS 233
Query: 521 GHDRMARL---WATDSYHPLRLFVGHYSDV-DCVQFHPNSNYVATGSSDRTIRLWDCVTG 576
+ R R+ W ++ GH V C+QF N + +GS D T+++W VTG
Sbjct: 234 AYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTG 291
Query: 577 SHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCF 636
+R L GH V+ S + + S D + +W+ VR C
Sbjct: 292 KCLRTLVGHTGGVW--SSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CM 347
Query: 637 SRDGNILASSGQDCSVKLWD 656
+ S +D ++++WD
Sbjct: 348 HLHEKRVVSGSRDATLRVWD 367
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 239 (89.2 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 64/214 (29%), Positives = 96/214 (44%)
Query: 455 TLVGHEGPVRKLSFSPDR-SLLLSCSQDNTIRLWSLLLW------RCLVVYKGHGHPVWD 507
+LVGH G V ++ SP+ ++S S+D T+ +W L + KGH H V D
Sbjct: 16 SLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQD 75
Query: 508 IKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRT 567
+ S G + S D RLW RLF GH DV V F ++ + +GS D T
Sbjct: 76 VVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDAT 135
Query: 568 IRLWDCVTGSHVRLLTG---HKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXX 624
I++W+ + G L G H+ V + FS + S D V +WD+ +
Sbjct: 136 IKVWNTL-GECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTL 194
Query: 625 XXXXDVVRALCFSRDGNILASSGQDCSVKLWDFA 658
V + S DG++ AS G+D LW+ +
Sbjct: 195 TDHTGYVNTVTISPDGSLCASGGKDTFACLWELS 228
Score = 225 (84.3 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 63/218 (28%), Positives = 98/218 (44%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
R+L GH V+ + S D LS S DNT+RLW + ++KGH V + FS
Sbjct: 64 RSLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSD 123
Query: 514 GYYFASAGHDRMARLWAT--DSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLW 571
S D ++W T + L H V C++F PN+ + +GS D +++W
Sbjct: 124 NRQIISGSRDATIKVWNTLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIW 183
Query: 572 DCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVV 631
D + LT H V ++ S G AS G D +W+LS+ + +
Sbjct: 184 DIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEAR-NTI 242
Query: 632 RALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEV 669
AL FS + L+++ D + +WD L+ +V E V
Sbjct: 243 NALAFSPNKYWLSAATDD-KIIIWDL--LTKQVLAEIV 277
Score = 191 (72.3 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 51/180 (28%), Positives = 81/180 (45%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +R+ D +TR GH V ++FS D ++S S+D TI++W+ L C
Sbjct: 91 DNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATIKVWNTL-GECKFTL 149
Query: 499 KG-HGHPVWD--IKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPN 555
+G H W I+FSP+ S D ++W S+ H V+ V P+
Sbjct: 150 EGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPD 209
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
+ A+G D LW+ +G + L + AL+FS ++ SA D + +WDL
Sbjct: 210 GSLCASGGKDTFACLWELSSGKPLYKLEARNT-INALAFSP-NKYWLSAATDDKIIIWDL 267
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 242 (90.2 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 63/216 (29%), Positives = 95/216 (43%)
Query: 447 ERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVW 506
E N +R L GH G + F D ++ S S D T LW + + + GH V
Sbjct: 130 EGNVRVSRELAGHTGYLSCCRFLDDNQIVTS-SGDTTCALWDIETGQQTTTFAGHTGDVM 188
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
+ +P F S D A+LW + F GH SD++ + F PN N ATGS D
Sbjct: 189 SLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDA 248
Query: 567 TIRLWDC------VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXX 620
T RL+D + SH ++ G + +++FS GR L + D N ++WD
Sbjct: 249 TCRLFDLRADQELMVYSHDNIICG----ITSVAFSKSGRLLLAGYDDFNCNVWDALKADR 304
Query: 621 XXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ V L + DG +A+ D +K+W+
Sbjct: 305 AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 229 (85.7 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 66/251 (26%), Positives = 102/251 (40%)
Query: 422 KAMKSSDQLQDIEMECDD-----ILVRI--MDERNAETTRTLVGHEGPVRKLSFSPDRSL 474
+A + +Q++D C D I I + T RTL GH + + + D L
Sbjct: 10 EAEQLKNQIRDARKACADATLSQITANIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRL 69
Query: 475 LLSCSQDNTIRLWSLLLWRCLVVYKGHGHPV---WDIK--FSPHGYYFASAGHDRMARLW 529
L+S SQD L++W K H P+ W + ++P G Y A G D + ++
Sbjct: 70 LVSASQDG-----KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124
Query: 530 ----ATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH 585
+ R GH + C +F + N + T S D T LWD TG GH
Sbjct: 125 NLKTREGNVRVSRELAGHTGYLSCCRFL-DDNQIVTSSGDTTCALWDIETGQQTTTFAGH 183
Query: 586 KAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILAS 645
V +LS + R S D + +WD+ + A+CF +GN A+
Sbjct: 184 TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFAT 243
Query: 646 SGQDCSVKLWD 656
D + +L+D
Sbjct: 244 GSDDATCRLFD 254
Score = 181 (68.8 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 48/180 (26%), Positives = 75/180 (41%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D + D + T T GH G V LS +PD L +S + D + +LW + C +
Sbjct: 163 DTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF 222
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC----VQFHP 554
GH + I F P+G FA+ D RL+ D L V + ++ C V F
Sbjct: 223 TGHESDINAICFFPNGNAFATGSDDATCRLF--DLRADQELMVYSHDNIICGITSVAFSK 280
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+ + G D +WD + +L GH V L + G +A+ D + +W+
Sbjct: 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 154 (59.3 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 40/168 (23%), Positives = 70/168 (41%)
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + +F S+G D LW ++ F GH DV + P++
Sbjct: 141 GHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLF 199
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXX 619
+G+ D + +LWD G + TGH++ + A+ F G A+ D ++DL
Sbjct: 200 VSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ 259
Query: 620 XXXXXXXXXDV--VRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVG 665
+ + ++ FS+ G +L + D + +WD K +D G
Sbjct: 260 ELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDALK-ADRAG 306
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 242 (90.2 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 62/213 (29%), Positives = 93/213 (43%)
Query: 447 ERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVW 506
E N +R L GH G + F D ++ S S D T LW + + V + GH V
Sbjct: 130 EGNVRVSRELPGHTGYLSCCRFLDDNQIITS-SGDTTCALWDIETGQQTVGFAGHSGDVM 188
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
+ +P G F S D +LW + F+GH SD++ V F PN TGS D
Sbjct: 189 SLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDA 248
Query: 567 TIRLWDCVTGSHVRLLTGHK---APVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXX 623
T RL+D + L+ H + +++FS GR L + D N ++WD
Sbjct: 249 TCRLFDLRADQEL-LMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGV 307
Query: 624 XXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ V L + DG +A+ D +K+W+
Sbjct: 308 LAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 211 (79.3 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 65/251 (25%), Positives = 106/251 (42%)
Query: 422 KAMKSSDQLQDIEMEC-DDILVRI---MDE--R-NAETTRTLVGHEGPVRKLSFSPDRSL 474
+A + +Q++D C D L +I +D R T RTL GH + + + D L
Sbjct: 10 EAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRL 69
Query: 475 LLSCSQDNTIRLWSLLLWRCLVVYKGHGHPV---WDIK--FSPHGYYFASAGHDRMARLW 529
L+S SQD L++W K H P+ W + ++P G + A G D + ++
Sbjct: 70 LVSASQDG-----KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIY 124
Query: 530 ATDS----YHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH 585
+ + R GH + C +F + N + T S D T LWD TG GH
Sbjct: 125 SLKTREGNVRVSRELPGHTGYLSCCRFL-DDNQIITSSGDTTCALWDIETGQQTVGFAGH 183
Query: 586 KAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILAS 645
V +LS + GR S D ++ +WD+ + + A+ F +G +
Sbjct: 184 SGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTT 243
Query: 646 SGQDCSVKLWD 656
D + +L+D
Sbjct: 244 GSDDATCRLFD 254
Score = 184 (69.8 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 54/231 (23%), Positives = 94/231 (40%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEM--ECDDILVRIMDE 447
V C + SI ++ E +++ +P + L D ++ D + D
Sbjct: 112 VACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDI 171
Query: 448 RNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWD 507
+ T GH G V LS +PD +S + D +I+LW + C + GH +
Sbjct: 172 ETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINA 231
Query: 508 IKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC----VQFHPNSNYVATGS 563
+ F P+GY F + D RL+ + L ++ H ++ C V F + + G
Sbjct: 232 VAFFPNGYAFTTGSDDATCRLFDLRADQELLMY-SH-DNIICGITSVAFSRSGRLLLAGY 289
Query: 564 SDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
D +WD + G +L GH V L + G +A+ D + +W+
Sbjct: 290 DDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 141 (54.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 50/210 (23%), Positives = 85/210 (40%)
Query: 463 VRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLV-VYK---GHGHPVWDIKFSPHGYYFA 518
V +++P + + DN ++SL V V + GH + +F
Sbjct: 100 VMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIIT 159
Query: 519 SAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH 578
S+G D LW ++ F GH DV + P+ +G+ D +I+LWD V S
Sbjct: 160 SSG-DTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD-VRDSM 217
Query: 579 VR-LLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDV--VRALC 635
R GH++ + A++F G + D ++DL + + ++
Sbjct: 218 CRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVA 277
Query: 636 FSRDGNILASSGQDCSVKLWDFAKLSDEVG 665
FSR G +L + D + +WD K D G
Sbjct: 278 FSRSGRLLLAGYDDFNCNIWDAMK-GDRAG 306
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 242 (90.2 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 62/213 (29%), Positives = 93/213 (43%)
Query: 447 ERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVW 506
E N +R L GH G + F D ++ S S D T LW + + V + GH V
Sbjct: 130 EGNVRVSRELPGHTGYLSCCRFLDDNQIITS-SGDTTCALWDIETGQQTVGFAGHSGDVM 188
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
+ +P G F S D +LW + F+GH SD++ V F PN TGS D
Sbjct: 189 SLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDA 248
Query: 567 TIRLWDCVTGSHVRLLTGHK---APVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXX 623
T RL+D + L+ H + +++FS GR L + D N ++WD
Sbjct: 249 TCRLFDLRADQEL-LMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGV 307
Query: 624 XXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ V L + DG +A+ D +K+W+
Sbjct: 308 LAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 211 (79.3 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 65/251 (25%), Positives = 106/251 (42%)
Query: 422 KAMKSSDQLQDIEMEC-DDILVRI---MDE--R-NAETTRTLVGHEGPVRKLSFSPDRSL 474
+A + +Q++D C D L +I +D R T RTL GH + + + D L
Sbjct: 10 EAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRL 69
Query: 475 LLSCSQDNTIRLWSLLLWRCLVVYKGHGHPV---WDIK--FSPHGYYFASAGHDRMARLW 529
L+S SQD L++W K H P+ W + ++P G + A G D + ++
Sbjct: 70 LVSASQDG-----KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIY 124
Query: 530 ATDS----YHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH 585
+ + R GH + C +F + N + T S D T LWD TG GH
Sbjct: 125 SLKTREGNVRVSRELPGHTGYLSCCRFL-DDNQIITSSGDTTCALWDIETGQQTVGFAGH 183
Query: 586 KAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILAS 645
V +LS + GR S D ++ +WD+ + + A+ F +G +
Sbjct: 184 SGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTT 243
Query: 646 SGQDCSVKLWD 656
D + +L+D
Sbjct: 244 GSDDATCRLFD 254
Score = 184 (69.8 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 54/231 (23%), Positives = 94/231 (40%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEM--ECDDILVRIMDE 447
V C + SI ++ E +++ +P + L D ++ D + D
Sbjct: 112 VACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDI 171
Query: 448 RNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWD 507
+ T GH G V LS +PD +S + D +I+LW + C + GH +
Sbjct: 172 ETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINA 231
Query: 508 IKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC----VQFHPNSNYVATGS 563
+ F P+GY F + D RL+ + L ++ H ++ C V F + + G
Sbjct: 232 VAFFPNGYAFTTGSDDATCRLFDLRADQELLMY-SH-DNIICGITSVAFSRSGRLLLAGY 289
Query: 564 SDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
D +WD + G +L GH V L + G +A+ D + +W+
Sbjct: 290 DDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 141 (54.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 50/210 (23%), Positives = 85/210 (40%)
Query: 463 VRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLV-VYK---GHGHPVWDIKFSPHGYYFA 518
V +++P + + DN ++SL V V + GH + +F
Sbjct: 100 VMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIIT 159
Query: 519 SAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH 578
S+G D LW ++ F GH DV + P+ +G+ D +I+LWD V S
Sbjct: 160 SSG-DTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD-VRDSM 217
Query: 579 VR-LLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDV--VRALC 635
R GH++ + A++F G + D ++DL + + ++
Sbjct: 218 CRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVA 277
Query: 636 FSRDGNILASSGQDCSVKLWDFAKLSDEVG 665
FSR G +L + D + +WD K D G
Sbjct: 278 FSRSGRLLLAGYDDFNCNIWDAMK-GDRAG 306
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 242 (90.2 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 62/213 (29%), Positives = 93/213 (43%)
Query: 447 ERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVW 506
E N +R L GH G + F D ++ S S D T LW + + V + GH V
Sbjct: 130 EGNVRVSRELPGHTGYLSCCRFLDDNQIITS-SGDTTCALWDIETGQQTVGFAGHSGDVM 188
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
+ +P G F S D +LW + F+GH SD++ V F PN TGS D
Sbjct: 189 SLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDA 248
Query: 567 TIRLWDCVTGSHVRLLTGHK---APVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXX 623
T RL+D + L+ H + +++FS GR L + D N ++WD
Sbjct: 249 TCRLFDLRADQEL-LMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGV 307
Query: 624 XXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ V L + DG +A+ D +K+W+
Sbjct: 308 LAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 211 (79.3 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 65/251 (25%), Positives = 106/251 (42%)
Query: 422 KAMKSSDQLQDIEMEC-DDILVRI---MDE--R-NAETTRTLVGHEGPVRKLSFSPDRSL 474
+A + +Q++D C D L +I +D R T RTL GH + + + D L
Sbjct: 10 EAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRL 69
Query: 475 LLSCSQDNTIRLWSLLLWRCLVVYKGHGHPV---WDIK--FSPHGYYFASAGHDRMARLW 529
L+S SQD L++W K H P+ W + ++P G + A G D + ++
Sbjct: 70 LVSASQDG-----KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIY 124
Query: 530 ATDS----YHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH 585
+ + R GH + C +F + N + T S D T LWD TG GH
Sbjct: 125 SLKTREGNVRVSRELPGHTGYLSCCRFL-DDNQIITSSGDTTCALWDIETGQQTVGFAGH 183
Query: 586 KAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILAS 645
V +LS + GR S D ++ +WD+ + + A+ F +G +
Sbjct: 184 SGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTT 243
Query: 646 SGQDCSVKLWD 656
D + +L+D
Sbjct: 244 GSDDATCRLFD 254
Score = 184 (69.8 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 54/231 (23%), Positives = 94/231 (40%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEM--ECDDILVRIMDE 447
V C + SI ++ E +++ +P + L D ++ D + D
Sbjct: 112 VACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDI 171
Query: 448 RNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWD 507
+ T GH G V LS +PD +S + D +I+LW + C + GH +
Sbjct: 172 ETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINA 231
Query: 508 IKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC----VQFHPNSNYVATGS 563
+ F P+GY F + D RL+ + L ++ H ++ C V F + + G
Sbjct: 232 VAFFPNGYAFTTGSDDATCRLFDLRADQELLMY-SH-DNIICGITSVAFSRSGRLLLAGY 289
Query: 564 SDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
D +WD + G +L GH V L + G +A+ D + +W+
Sbjct: 290 DDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 141 (54.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 50/210 (23%), Positives = 85/210 (40%)
Query: 463 VRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLV-VYK---GHGHPVWDIKFSPHGYYFA 518
V +++P + + DN ++SL V V + GH + +F
Sbjct: 100 VMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIIT 159
Query: 519 SAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH 578
S+G D LW ++ F GH DV + P+ +G+ D +I+LWD V S
Sbjct: 160 SSG-DTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD-VRDSM 217
Query: 579 VR-LLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDV--VRALC 635
R GH++ + A++F G + D ++DL + + ++
Sbjct: 218 CRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVA 277
Query: 636 FSRDGNILASSGQDCSVKLWDFAKLSDEVG 665
FSR G +L + D + +WD K D G
Sbjct: 278 FSRSGRLLLAGYDDFNCNIWDAMK-GDRAG 306
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 242 (90.2 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 62/213 (29%), Positives = 93/213 (43%)
Query: 447 ERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVW 506
E N +R L GH G + F D ++ S S D T LW + + V + GH V
Sbjct: 130 EGNVRVSRELPGHTGYLSCCRFLDDNQIITS-SGDTTCALWDIETGQQTVGFAGHSGDVM 188
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
+ +P G F S D +LW + F+GH SD++ V F PN TGS D
Sbjct: 189 SLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDA 248
Query: 567 TIRLWDCVTGSHVRLLTGHK---APVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXX 623
T RL+D + L+ H + +++FS GR L + D N ++WD
Sbjct: 249 TCRLFDLRADQEL-LMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGV 307
Query: 624 XXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ V L + DG +A+ D +K+W+
Sbjct: 308 LAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 211 (79.3 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 65/251 (25%), Positives = 106/251 (42%)
Query: 422 KAMKSSDQLQDIEMEC-DDILVRI---MDE--R-NAETTRTLVGHEGPVRKLSFSPDRSL 474
+A + +Q++D C D L +I +D R T RTL GH + + + D L
Sbjct: 10 EAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRL 69
Query: 475 LLSCSQDNTIRLWSLLLWRCLVVYKGHGHPV---WDIK--FSPHGYYFASAGHDRMARLW 529
L+S SQD L++W K H P+ W + ++P G + A G D + ++
Sbjct: 70 LVSASQDG-----KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIY 124
Query: 530 ATDS----YHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH 585
+ + R GH + C +F + N + T S D T LWD TG GH
Sbjct: 125 SLKTREGNVRVSRELPGHTGYLSCCRFL-DDNQIITSSGDTTCALWDIETGQQTVGFAGH 183
Query: 586 KAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILAS 645
V +LS + GR S D ++ +WD+ + + A+ F +G +
Sbjct: 184 SGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTT 243
Query: 646 SGQDCSVKLWD 656
D + +L+D
Sbjct: 244 GSDDATCRLFD 254
Score = 184 (69.8 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 54/231 (23%), Positives = 94/231 (40%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEM--ECDDILVRIMDE 447
V C + SI ++ E +++ +P + L D ++ D + D
Sbjct: 112 VACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDI 171
Query: 448 RNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWD 507
+ T GH G V LS +PD +S + D +I+LW + C + GH +
Sbjct: 172 ETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINA 231
Query: 508 IKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC----VQFHPNSNYVATGS 563
+ F P+GY F + D RL+ + L ++ H ++ C V F + + G
Sbjct: 232 VAFFPNGYAFTTGSDDATCRLFDLRADQELLMY-SH-DNIICGITSVAFSRSGRLLLAGY 289
Query: 564 SDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
D +WD + G +L GH V L + G +A+ D + +W+
Sbjct: 290 DDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 141 (54.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 50/210 (23%), Positives = 85/210 (40%)
Query: 463 VRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLV-VYK---GHGHPVWDIKFSPHGYYFA 518
V +++P + + DN ++SL V V + GH + +F
Sbjct: 100 VMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIIT 159
Query: 519 SAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH 578
S+G D LW ++ F GH DV + P+ +G+ D +I+LWD V S
Sbjct: 160 SSG-DTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD-VRDSM 217
Query: 579 VR-LLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDV--VRALC 635
R GH++ + A++F G + D ++DL + + ++
Sbjct: 218 CRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVA 277
Query: 636 FSRDGNILASSGQDCSVKLWDFAKLSDEVG 665
FSR G +L + D + +WD K D G
Sbjct: 278 FSRSGRLLLAGYDDFNCNIWDAMK-GDRAG 306
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 242 (90.2 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 62/213 (29%), Positives = 93/213 (43%)
Query: 447 ERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVW 506
E N +R L GH G + F D ++ S S D T LW + + V + GH V
Sbjct: 130 EGNVRVSRELPGHTGYLSCCRFLDDNQIITS-SGDTTCALWDIETGQQTVGFAGHSGDVM 188
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
+ +P G F S D +LW + F+GH SD++ V F PN TGS D
Sbjct: 189 SLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDA 248
Query: 567 TIRLWDCVTGSHVRLLTGHK---APVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXX 623
T RL+D + L+ H + +++FS GR L + D N ++WD
Sbjct: 249 TCRLFDLRADQEL-LMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGV 307
Query: 624 XXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ V L + DG +A+ D +K+W+
Sbjct: 308 LAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 211 (79.3 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 65/251 (25%), Positives = 106/251 (42%)
Query: 422 KAMKSSDQLQDIEMEC-DDILVRI---MDE--R-NAETTRTLVGHEGPVRKLSFSPDRSL 474
+A + +Q++D C D L +I +D R T RTL GH + + + D L
Sbjct: 10 EAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRL 69
Query: 475 LLSCSQDNTIRLWSLLLWRCLVVYKGHGHPV---WDIK--FSPHGYYFASAGHDRMARLW 529
L+S SQD L++W K H P+ W + ++P G + A G D + ++
Sbjct: 70 LVSASQDG-----KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIY 124
Query: 530 ATDS----YHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH 585
+ + R GH + C +F + N + T S D T LWD TG GH
Sbjct: 125 SLKTREGNVRVSRELPGHTGYLSCCRFL-DDNQIITSSGDTTCALWDIETGQQTVGFAGH 183
Query: 586 KAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILAS 645
V +LS + GR S D ++ +WD+ + + A+ F +G +
Sbjct: 184 SGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTT 243
Query: 646 SGQDCSVKLWD 656
D + +L+D
Sbjct: 244 GSDDATCRLFD 254
Score = 184 (69.8 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 54/231 (23%), Positives = 94/231 (40%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEM--ECDDILVRIMDE 447
V C + SI ++ E +++ +P + L D ++ D + D
Sbjct: 112 VACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDI 171
Query: 448 RNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWD 507
+ T GH G V LS +PD +S + D +I+LW + C + GH +
Sbjct: 172 ETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINA 231
Query: 508 IKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC----VQFHPNSNYVATGS 563
+ F P+GY F + D RL+ + L ++ H ++ C V F + + G
Sbjct: 232 VAFFPNGYAFTTGSDDATCRLFDLRADQELLMY-SH-DNIICGITSVAFSRSGRLLLAGY 289
Query: 564 SDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
D +WD + G +L GH V L + G +A+ D + +W+
Sbjct: 290 DDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 141 (54.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 50/210 (23%), Positives = 85/210 (40%)
Query: 463 VRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLV-VYK---GHGHPVWDIKFSPHGYYFA 518
V +++P + + DN ++SL V V + GH + +F
Sbjct: 100 VMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIIT 159
Query: 519 SAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH 578
S+G D LW ++ F GH DV + P+ +G+ D +I+LWD V S
Sbjct: 160 SSG-DTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD-VRDSM 217
Query: 579 VR-LLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDV--VRALC 635
R GH++ + A++F G + D ++DL + + ++
Sbjct: 218 CRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVA 277
Query: 636 FSRDGNILASSGQDCSVKLWDFAKLSDEVG 665
FSR G +L + D + +WD K D G
Sbjct: 278 FSRSGRLLLAGYDDFNCNIWDAMK-GDRAG 306
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 255 (94.8 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 76/277 (27%), Positives = 128/277 (46%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQK-LKAMKS------SDQLQD--IEMECDDI 440
+TC + + I++ G ++ +K+WS V K L+ + S Q++D I D
Sbjct: 304 ITCLQFCGN-RIVS-GSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDR 361
Query: 441 LVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKG 500
+++ + E TL GH VR + R ++S S+D T+R+W + +CL V G
Sbjct: 362 TLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMG 419
Query: 501 HGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVA 560
H V +++ G S +D M ++W ++ L GH + V +QF + +V
Sbjct: 420 HVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVV 475
Query: 561 TGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXX 620
+GS D +IR+WD TG+ + LTGH++ + L S D V +WD+
Sbjct: 476 SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQC 533
Query: 621 XXXXXXXXDVVRAL-CFSRDGNILASSGQDCSVKLWD 656
A+ C + N + +S D +VKLWD
Sbjct: 534 LQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWD 570
Score = 239 (89.2 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 62/207 (29%), Positives = 97/207 (46%)
Query: 451 ETTRTLVGHEGPVRK-LSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIK 509
++ + L GH+ V L F +R ++S S DNT+++WS + +CL GH VW +
Sbjct: 291 KSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 348
Query: 510 FSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIR 569
+ S DR ++W ++ + GH S V C+ H V +GS D T+R
Sbjct: 349 MRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLR 404
Query: 570 LWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXD 629
+WD TG + +L GH A V + + GR + S D V +WD +
Sbjct: 405 VWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTN 462
Query: 630 VVRALCFSRDGNILASSGQDCSVKLWD 656
V +L F DG + S D S+++WD
Sbjct: 463 RVYSLQF--DGIHVVSGSLDTSIRVWD 487
Score = 198 (74.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 47/180 (26%), Positives = 88/180 (48%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +R+ D + L+GH VR + + R ++S + D +++W CL
Sbjct: 400 DATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPETETCLHTL 457
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
+GH + V+ ++F G + S D R+W ++ + + GH S ++ N
Sbjct: 458 QGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNI 513
Query: 559 VATGSSDRTIRLWDCVTGSHVRLLTG---HKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
+ +G++D T+++WD TG ++ L G H++ V L F+ F+ ++ DG V +WDL
Sbjct: 514 LVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKLWDL 571
Score = 170 (64.9 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 45/147 (30%), Positives = 66/147 (44%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +V++ D TL GH V L F D ++S S D +IR+W + C+
Sbjct: 440 DFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTL 497
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVG---HYSDVDCVQFHPN 555
GH ++ + S D ++W + L+ G H S V C+QF N
Sbjct: 498 TGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF--N 553
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVRLL 582
N+V T S D T++LWD TG +R L
Sbjct: 554 KNFVITSSDDGTVKLWDLKTGEFIRNL 580
Score = 145 (56.1 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 64/260 (24%), Positives = 109/260 (41%)
Query: 414 WSLVPQKLKAMKSSDQLQDIEMECDDI--LVRIMDERNAETTRTLVGHEGPVRKLSFSPD 471
WS P+KL A+ D+L D E + ++++++ + +L+ E + LSF
Sbjct: 164 WS-GPEKLLAL---DELID-SCEPTQVKHMMQVIEPQFQRDFISLLPKELALYVLSFLEP 218
Query: 472 RSLLLSCSQDNTIRLWSLL-----LWRCLVVYKGHGHPVWDIK----FSPHGYYFA--SA 520
+ LL + T R W +L LWR +G P+ IK P G+ + +
Sbjct: 219 KDLLQAAQ---TCRYWRILAEDNLLWREKCKEEGIDEPL-HIKRRKVIKP-GFIHSPWKS 273
Query: 521 GHDRMARL---WATDSYHPLRLFVGHYSDV-DCVQFHPNSNYVATGSSDRTIRLWDCVTG 576
+ R R+ W ++ GH V C+QF N + +GS D T+++W VTG
Sbjct: 274 AYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTG 331
Query: 577 SHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCF 636
+R L GH V+ S + + S D + +W+ VR C
Sbjct: 332 KCLRTLVGHTGGVW--SSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CM 387
Query: 637 SRDGNILASSGQDCSVKLWD 656
+ S +D ++++WD
Sbjct: 388 HLHEKRVVSGSRDATLRVWD 407
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 252 (93.8 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 86/318 (27%), Positives = 138/318 (43%)
Query: 371 GPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLW---SLVPQKLKAMKSS 427
G +L I C + N++ V C + +D I++ G ++ IK+W SL K+ +
Sbjct: 177 GRHNLQRIQCRSE-NSKG-VYCLQYDDD-KIIS-GLRDNSIKIWDKSSLECLKVLTGHTG 232
Query: 428 DQL------QDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQD 481
L + I D VR+ D E TL+ H V L FS L+++CS+D
Sbjct: 233 SVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKD 290
Query: 482 NTIRLWSLLLWRCLVVYK---GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLR 538
+I +W + + + + GH V + F Y SA DR ++W+T + +R
Sbjct: 291 RSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVR 348
Query: 539 LFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCG 598
GH + C+Q+ V +GSSD TIRLWD G+ +R+L GH+ V + F
Sbjct: 349 TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--N 404
Query: 599 RFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNI---------LASSGQD 649
+ + S DG + +WDL +R L G + + SS D
Sbjct: 405 KRIVSGAYDGKIKVWDLQAALDPRAPASTL-CLRTLV-EHSGRVFRLQFDEFQIISSSHD 462
Query: 650 CSVKLWDFAKLSDEVGTE 667
++ +WDF + E
Sbjct: 463 DTILIWDFLNVPPSAQNE 480
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 261 (96.9 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 68/244 (27%), Positives = 108/244 (44%)
Query: 431 QDIEMEC-DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL 489
+D + C +D L +++ T GH + F P S L + S D+TI+LW L
Sbjct: 372 RDYLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDL 431
Query: 490 LLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC 549
C + +GH H VW + G + ASA D +++W +S GH V+
Sbjct: 432 NKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNS 491
Query: 550 VQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGN 609
++F P SN + T S+D+T+ +WD TG + L GH V +F+ G +AS G
Sbjct: 492 IEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTPRGHIIASCDARGV 551
Query: 610 VHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDF--AKLSDEVGTE 667
+WD + F + G +LA + + + L D ++ VG E
Sbjct: 552 TKLWDFRKLIPIVSIDVGPSSGNEVNFDQSGRVLAQASANGIIHLLDLKSGQIHKLVGHE 611
Query: 668 -EVN 670
EV+
Sbjct: 612 SEVH 615
Score = 222 (83.2 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 57/177 (32%), Positives = 87/177 (49%)
Query: 439 DILVRIMDERNAETTR-TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
D+ +I D N+E R TL GH V + F P ++LL+ S D T+ +W +C
Sbjct: 465 DMTSKIWDV-NSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQS 523
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPL-RLFVGHYSDVDCVQFHPNS 556
GH H V D F+P G+ AS + +LW P+ + VG S + V F +
Sbjct: 524 LYGHMHSVNDATFTPRGHIIASCDARGVTKLWDFRKLIPIVSIDVGPSSGNE-VNFDQSG 582
Query: 557 NYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMW 613
+A S++ I L D +G + L GH++ V+++ FS G L S G DG + +W
Sbjct: 583 RVLAQASANGIIHLLDLKSGQ-IHKLVGHESEVHSVVFSHLGENLYSGGSDGTIRLW 638
Score = 219 (82.2 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 70/230 (30%), Positives = 97/230 (42%)
Query: 459 HEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL-LWRCLVVYKGHGHPVW--DIKFSPHGY 515
HE PV + P R L+SCS+D RLW ++ L + V+ G GH W F P G
Sbjct: 359 HELPVSCIVMHPCRDYLISCSED---RLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGS 415
Query: 516 YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT 575
A++ D +LW + GH V +H ++VA+ S D T ++WD V
Sbjct: 416 KLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWD-VN 474
Query: 576 GSHVRL-LTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRAL 634
R L GH V ++ F L +A D + +WD V
Sbjct: 475 SERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDA 534
Query: 635 CFSRDGNILASSGQDCSVKLWDFAKL----SDEVGTE---EVNLSHSADI 677
F+ G+I+AS KLWDF KL S +VG EVN S +
Sbjct: 535 TFTPRGHIIASCDARGVTKLWDFRKLIPIVSIDVGPSSGNEVNFDQSGRV 584
Score = 193 (73.0 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 47/160 (29%), Positives = 75/160 (46%)
Query: 497 VYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNS 556
+++ H PV I P Y S DR+ ++ + L GH + FHP+
Sbjct: 355 IFRLHELPVSCIVMHPCRDYLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSG 414
Query: 557 NYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLS 616
+ +AT S D TI+LWD G L GH V++ ++ CG F+ASA D +WD++
Sbjct: 415 SKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVN 474
Query: 617 NXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ D V ++ F NIL ++ D ++ +WD
Sbjct: 475 SERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWD 514
Score = 39 (18.8 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 19/54 (35%), Positives = 25/54 (46%)
Query: 346 LPPLKDSEKID-KLKALREATKRVTLGPESLPSIACYTLLNARQQVTCAEISED 398
+PPL+ E++ L E T+ VT S Y L +QVT E SED
Sbjct: 7 VPPLRVLEELGIGLSPTGEVTEAVT-------SEGAYYL----EQVTITETSED 49
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 255 (94.8 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 76/277 (27%), Positives = 128/277 (46%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQK-LKAMKS------SDQLQD--IEMECDDI 440
+TC + + I++ G ++ +K+WS V K L+ + S Q++D I D
Sbjct: 384 ITCLQFCGN-RIVS-GSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDR 441
Query: 441 LVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKG 500
+++ + E TL GH VR + R ++S S+D T+R+W + +CL V G
Sbjct: 442 TLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMG 499
Query: 501 HGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVA 560
H V +++ G S +D M ++W ++ L GH + V +QF + +V
Sbjct: 500 HVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVV 555
Query: 561 TGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXX 620
+GS D +IR+WD TG+ + LTGH++ + L S D V +WD+
Sbjct: 556 SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQC 613
Query: 621 XXXXXXXXDVVRAL-CFSRDGNILASSGQDCSVKLWD 656
A+ C + N + +S D +VKLWD
Sbjct: 614 LQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWD 650
Score = 239 (89.2 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 62/207 (29%), Positives = 97/207 (46%)
Query: 451 ETTRTLVGHEGPVRK-LSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIK 509
++ + L GH+ V L F +R ++S S DNT+++WS + +CL GH VW +
Sbjct: 371 KSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 428
Query: 510 FSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIR 569
+ S DR ++W ++ + GH S V C+ H V +GS D T+R
Sbjct: 429 MRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLR 484
Query: 570 LWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXD 629
+WD TG + +L GH A V + + GR + S D V +WD +
Sbjct: 485 VWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTN 542
Query: 630 VVRALCFSRDGNILASSGQDCSVKLWD 656
V +L F DG + S D S+++WD
Sbjct: 543 RVYSLQF--DGIHVVSGSLDTSIRVWD 567
Score = 198 (74.8 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 47/180 (26%), Positives = 88/180 (48%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +R+ D + L+GH VR + + R ++S + D +++W CL
Sbjct: 480 DATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPETETCLHTL 537
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
+GH + V+ ++F G + S D R+W ++ + + GH S ++ N
Sbjct: 538 QGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNI 593
Query: 559 VATGSSDRTIRLWDCVTGSHVRLLTG---HKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
+ +G++D T+++WD TG ++ L G H++ V L F+ F+ ++ DG V +WDL
Sbjct: 594 LVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKLWDL 651
Score = 170 (64.9 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 45/147 (30%), Positives = 66/147 (44%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +V++ D TL GH V L F D ++S S D +IR+W + C+
Sbjct: 520 DFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTL 577
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVG---HYSDVDCVQFHPN 555
GH ++ + S D ++W + L+ G H S V C+QF N
Sbjct: 578 TGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF--N 633
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVRLL 582
N+V T S D T++LWD TG +R L
Sbjct: 634 KNFVITSSDDGTVKLWDLKTGEFIRNL 660
Score = 145 (56.1 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 64/260 (24%), Positives = 109/260 (41%)
Query: 414 WSLVPQKLKAMKSSDQLQDIEMECDDI--LVRIMDERNAETTRTLVGHEGPVRKLSFSPD 471
WS P+KL A+ D+L D E + ++++++ + +L+ E + LSF
Sbjct: 244 WS-GPEKLLAL---DELID-SCEPTQVKHMMQVIEPQFQRDFISLLPKELALYVLSFLEP 298
Query: 472 RSLLLSCSQDNTIRLWSLL-----LWRCLVVYKGHGHPVWDIK----FSPHGYYFA--SA 520
+ LL + T R W +L LWR +G P+ IK P G+ + +
Sbjct: 299 KDLLQAAQ---TCRYWRILAEDNLLWREKCKEEGIDEPL-HIKRRKVIKP-GFIHSPWKS 353
Query: 521 GHDRMARL---WATDSYHPLRLFVGHYSDV-DCVQFHPNSNYVATGSSDRTIRLWDCVTG 576
+ R R+ W ++ GH V C+QF N + +GS D T+++W VTG
Sbjct: 354 AYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTG 411
Query: 577 SHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCF 636
+R L GH V+ S + + S D + +W+ VR C
Sbjct: 412 KCLRTLVGHTGGVW--SSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CM 467
Query: 637 SRDGNILASSGQDCSVKLWD 656
+ S +D ++++WD
Sbjct: 468 HLHEKRVVSGSRDATLRVWD 487
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 255 (94.8 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 76/277 (27%), Positives = 128/277 (46%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQK-LKAMKS------SDQLQD--IEMECDDI 440
+TC + + I++ G ++ +K+WS V K L+ + S Q++D I D
Sbjct: 389 ITCLQFCGN-RIVS-GSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDR 446
Query: 441 LVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKG 500
+++ + E TL GH VR + R ++S S+D T+R+W + +CL V G
Sbjct: 447 TLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMG 504
Query: 501 HGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVA 560
H V +++ G S +D M ++W ++ L GH + V +QF + +V
Sbjct: 505 HVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVV 560
Query: 561 TGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXX 620
+GS D +IR+WD TG+ + LTGH++ + L S D V +WD+
Sbjct: 561 SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQC 618
Query: 621 XXXXXXXXDVVRAL-CFSRDGNILASSGQDCSVKLWD 656
A+ C + N + +S D +VKLWD
Sbjct: 619 LQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWD 655
Score = 239 (89.2 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 62/207 (29%), Positives = 97/207 (46%)
Query: 451 ETTRTLVGHEGPVRK-LSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIK 509
++ + L GH+ V L F +R ++S S DNT+++WS + +CL GH VW +
Sbjct: 376 KSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 433
Query: 510 FSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIR 569
+ S DR ++W ++ + GH S V C+ H V +GS D T+R
Sbjct: 434 MRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLR 489
Query: 570 LWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXD 629
+WD TG + +L GH A V + + GR + S D V +WD +
Sbjct: 490 VWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTN 547
Query: 630 VVRALCFSRDGNILASSGQDCSVKLWD 656
V +L F DG + S D S+++WD
Sbjct: 548 RVYSLQF--DGIHVVSGSLDTSIRVWD 572
Score = 198 (74.8 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 47/180 (26%), Positives = 88/180 (48%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +R+ D + L+GH VR + + R ++S + D +++W CL
Sbjct: 485 DATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPETETCLHTL 542
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
+GH + V+ ++F G + S D R+W ++ + + GH S ++ N
Sbjct: 543 QGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNI 598
Query: 559 VATGSSDRTIRLWDCVTGSHVRLLTG---HKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
+ +G++D T+++WD TG ++ L G H++ V L F+ F+ ++ DG V +WDL
Sbjct: 599 LVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKLWDL 656
Score = 170 (64.9 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 45/147 (30%), Positives = 66/147 (44%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +V++ D TL GH V L F D ++S S D +IR+W + C+
Sbjct: 525 DFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTL 582
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVG---HYSDVDCVQFHPN 555
GH ++ + S D ++W + L+ G H S V C+QF N
Sbjct: 583 TGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF--N 638
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVRLL 582
N+V T S D T++LWD TG +R L
Sbjct: 639 KNFVITSSDDGTVKLWDLKTGEFIRNL 665
Score = 145 (56.1 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 64/260 (24%), Positives = 109/260 (41%)
Query: 414 WSLVPQKLKAMKSSDQLQDIEMECDDI--LVRIMDERNAETTRTLVGHEGPVRKLSFSPD 471
WS P+KL A+ D+L D E + ++++++ + +L+ E + LSF
Sbjct: 249 WS-GPEKLLAL---DELID-SCEPTQVKHMMQVIEPQFQRDFISLLPKELALYVLSFLEP 303
Query: 472 RSLLLSCSQDNTIRLWSLL-----LWRCLVVYKGHGHPVWDIK----FSPHGYYFA--SA 520
+ LL + T R W +L LWR +G P+ IK P G+ + +
Sbjct: 304 KDLLQAAQ---TCRYWRILAEDNLLWREKCKEEGIDEPL-HIKRRKVIKP-GFIHSPWKS 358
Query: 521 GHDRMARL---WATDSYHPLRLFVGHYSDV-DCVQFHPNSNYVATGSSDRTIRLWDCVTG 576
+ R R+ W ++ GH V C+QF N + +GS D T+++W VTG
Sbjct: 359 AYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTG 416
Query: 577 SHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCF 636
+R L GH V+ S + + S D + +W+ VR C
Sbjct: 417 KCLRTLVGHTGGVW--SSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CM 472
Query: 637 SRDGNILASSGQDCSVKLWD 656
+ S +D ++++WD
Sbjct: 473 HLHEKRVVSGSRDATLRVWD 492
>UNIPROTKB|E2RFV0 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:AAEX03006660 RefSeq:XP_853945.1 ProteinModelPortal:E2RFV0
Ensembl:ENSCAFT00000029577 GeneID:480619 KEGG:cfa:480619
NextBio:20855611 Uniprot:E2RFV0
Length = 421
Score = 249 (92.7 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 72/230 (31%), Positives = 103/230 (44%)
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLL-SCSQDNTIRLWSLLL-WRCLVVYK 499
++I D + LV H VR L+F+PD SL+L S S+D T+R+W L + V +
Sbjct: 152 IKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLR 211
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + V+ FSP S G + LW D Y +R GH+ DV F P+ +
Sbjct: 212 GHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPDGALL 271
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGH----KAPVYA----------LSFSVCGRFLASAG 605
AT S D + +WD G + + GH P++A +SFS G +AS
Sbjct: 272 ATASYDTRVYIWDPHNGD-ILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLHVASLA 330
Query: 606 GDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
D V W + + A FS DG++LA+ D SV W
Sbjct: 331 DDKMVRFWRIDEDYPVQVAPLSNGLCCA--FSTDGSVLAAGTHDGSVYFW 378
Score = 188 (71.2 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 56/206 (27%), Positives = 91/206 (44%)
Query: 465 KLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG-YYFASAGHD 523
+ F D+ LL + + I++W + + L+ H V D+ F+P G SA D
Sbjct: 133 RFRFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRD 192
Query: 524 RMARLW-ATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLL 582
+ R+W D + +++ GH + V F P+S+ + + + + + LW+ + +R L
Sbjct: 193 KTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKL 252
Query: 583 TGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXX------------XXXXXDV 630
GH V A FS G LA+A D V++WD N D
Sbjct: 253 EGHHHDVVACDFSPDGALLATASYDTRVYIWDPHNGDILMEFGHLFPPPTPIFAGGANDR 312
Query: 631 -VRALCFSRDGNILASSGQDCSVKLW 655
VR++ FS DG +AS D V+ W
Sbjct: 313 WVRSVSFSHDGLHVASLADDKMVRFW 338
Score = 158 (60.7 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 55/204 (26%), Positives = 88/204 (43%)
Query: 397 EDVSILAVGFSESYIKLWSLVPQKL--KAMKSSDQLQDIEMECDDILV----------RI 444
+D +LA G + IK+W + KL + ++ ++D+ D L+ R+
Sbjct: 138 QDQLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRV 197
Query: 445 MDERN-AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGH 503
D ++ + L GH+ V +FSPD S+L S + LW++ + + +GH H
Sbjct: 198 WDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEGHHH 257
Query: 504 PVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGS 563
V FSP G A+A +D +W + L F GH F P + A G+
Sbjct: 258 DVVACDFSPDGALLATASYDTRVYIWDPHNGDILMEF-GHL-------FPPPTPIFAGGA 309
Query: 564 SDRTIRLWDCV-TGSHVRLLTGHK 586
+DR +R G HV L K
Sbjct: 310 NDRWVRSVSFSHDGLHVASLADDK 333
Score = 152 (58.6 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 41/154 (26%), Positives = 70/154 (45%)
Query: 506 WD-IKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSS 564
W +F A+ ++ ++W + L V H V + F P+ + + +S
Sbjct: 131 WHRFRFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSAS 190
Query: 565 -DRTIRLWDCVT-GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXX 622
D+T+R+WD G+ +++L GH+ VY+ +FS L S G V +W++
Sbjct: 191 RDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIR 250
Query: 623 XXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
V A FS DG +LA++ D V +WD
Sbjct: 251 KLEGHHHDVVACDFSPDGALLATASYDTRVYIWD 284
Score = 114 (45.2 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 33/111 (29%), Positives = 52/111 (46%)
Query: 551 QFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRF-LASAGGDGN 609
+F + +ATG ++ I++WD TG + L H V L+F+ G L SA D
Sbjct: 135 RFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKT 194
Query: 610 VHMWDLSNXXXXXXXXXXX-DVVRALCFSRDGNILASSGQDCSVKLWDFAK 659
+ +WDL + + V + FS D ++L S G +V LW+ K
Sbjct: 195 LRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDK 245
Score = 58 (25.5 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 502 GHPVWDIKFSPHGYYFA-SAGHDRMARL--WA 530
G W + F+P G YFA S GH R +L W+
Sbjct: 34 GRENWTVAFAPDGSYFAWSQGH-RTVKLVPWS 64
>UNIPROTKB|Q9Y6I7 [details] [associations]
symbol:WSB1 "WD repeat and SOCS box-containing protein 1"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Reactome:REACT_6900
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622 CTD:26118
HOGENOM:HOG000063727 HOVERGEN:HBG034543 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ EMBL:AF072880 EMBL:AF069313 EMBL:AF240696
EMBL:AL110243 EMBL:AF112205 EMBL:AF106683 EMBL:AL110269
EMBL:BC021110 IPI:IPI00107502 IPI:IPI00146203 IPI:IPI00794974
PIR:T14773 PIR:T14788 RefSeq:NP_056441.6 RefSeq:NP_599027.1
UniGene:Hs.446017 ProteinModelPortal:Q9Y6I7 SMR:Q9Y6I7
IntAct:Q9Y6I7 STRING:Q9Y6I7 PhosphoSite:Q9Y6I7 DMDM:20532298
PaxDb:Q9Y6I7 PRIDE:Q9Y6I7 DNASU:26118 Ensembl:ENST00000262394
Ensembl:ENST00000348811 GeneID:26118 KEGG:hsa:26118 UCSC:uc002gzd.1
UCSC:uc002gze.1 GeneCards:GC17P025621 HGNC:HGNC:19221 HPA:HPA003293
MIM:610091 neXtProt:NX_Q9Y6I7 PharmGKB:PA134867554
InParanoid:Q9Y6I7 PhylomeDB:Q9Y6I7 ChiTaRS:WSB1 GenomeRNAi:26118
NextBio:48120 ArrayExpress:Q9Y6I7 Bgee:Q9Y6I7 CleanEx:HS_WSB1
Genevestigator:Q9Y6I7 GermOnline:ENSG00000109046 Uniprot:Q9Y6I7
Length = 421
Score = 249 (92.7 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 72/230 (31%), Positives = 103/230 (44%)
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLL-SCSQDNTIRLWSLLL-WRCLVVYK 499
++I D + LV H VR L+F+PD SL+L S S+D T+R+W L + V +
Sbjct: 152 IKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLR 211
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + V+ FSP S G + LW D Y +R GH+ DV F P+ +
Sbjct: 212 GHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPDGALL 271
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGH----KAPVYA----------LSFSVCGRFLASAG 605
AT S D + +WD G + + GH P++A +SFS G +AS
Sbjct: 272 ATASYDTRVYIWDPHNGD-ILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLHVASLA 330
Query: 606 GDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
D V W + + A FS DG++LA+ D SV W
Sbjct: 331 DDKMVRFWRIDEDYPVQVAPLSNGLCCA--FSTDGSVLAAGTHDGSVYFW 378
Score = 188 (71.2 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 56/206 (27%), Positives = 91/206 (44%)
Query: 465 KLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG-YYFASAGHD 523
+ F D+ LL + + I++W + + L+ H V D+ F+P G SA D
Sbjct: 133 RFRFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRD 192
Query: 524 RMARLW-ATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLL 582
+ R+W D + +++ GH + V F P+S+ + + + + + LW+ + +R L
Sbjct: 193 KTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKL 252
Query: 583 TGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXX------------XXXXXDV 630
GH V A FS G LA+A D V++WD N D
Sbjct: 253 EGHHHDVVACDFSPDGALLATASYDTRVYIWDPHNGDILMEFGHLFPPPTPIFAGGANDR 312
Query: 631 -VRALCFSRDGNILASSGQDCSVKLW 655
VR++ FS DG +AS D V+ W
Sbjct: 313 WVRSVSFSHDGLHVASLADDKMVRFW 338
Score = 158 (60.7 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 55/204 (26%), Positives = 88/204 (43%)
Query: 397 EDVSILAVGFSESYIKLWSLVPQKL--KAMKSSDQLQDIEMECDDILV----------RI 444
+D +LA G + IK+W + KL + ++ ++D+ D L+ R+
Sbjct: 138 QDQLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRV 197
Query: 445 MDERN-AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGH 503
D ++ + L GH+ V +FSPD S+L S + LW++ + + +GH H
Sbjct: 198 WDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEGHHH 257
Query: 504 PVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGS 563
V FSP G A+A +D +W + L F GH F P + A G+
Sbjct: 258 DVVACDFSPDGALLATASYDTRVYIWDPHNGDILMEF-GHL-------FPPPTPIFAGGA 309
Query: 564 SDRTIRLWDCV-TGSHVRLLTGHK 586
+DR +R G HV L K
Sbjct: 310 NDRWVRSVSFSHDGLHVASLADDK 333
Score = 152 (58.6 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 41/154 (26%), Positives = 70/154 (45%)
Query: 506 WD-IKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSS 564
W +F A+ ++ ++W + L V H V + F P+ + + +S
Sbjct: 131 WHRFRFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSAS 190
Query: 565 -DRTIRLWDCVT-GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXX 622
D+T+R+WD G+ +++L GH+ VY+ +FS L S G V +W++
Sbjct: 191 RDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIR 250
Query: 623 XXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
V A FS DG +LA++ D V +WD
Sbjct: 251 KLEGHHHDVVACDFSPDGALLATASYDTRVYIWD 284
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 231 (86.4 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 59/203 (29%), Positives = 94/203 (46%)
Query: 456 LVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGY 515
L GHEG V F+ D + L+C +D TIRLW+ + YK HG V D+ +
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNA 73
Query: 516 YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT 575
F S G DR W + +R F GH +V+ V+F+ +S+ V + DR++R+WDC +
Sbjct: 74 KFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRS 133
Query: 576 GS--HVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRA 633
S V+++ V +S + + DG V +D+ V
Sbjct: 134 HSVEPVQIIDTFLDTV--MSVVLTKTEIIGGSVDGTVRTFDMR--IGREMSDNLGQPVNC 189
Query: 634 LCFSRDGNILASSGQDCSVKLWD 656
+ S DGN + + D +++L D
Sbjct: 190 ISISNDGNCVLAGCLDSTLRLLD 212
Score = 156 (60.0 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 51/187 (27%), Positives = 84/187 (44%)
Query: 497 VYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQF-HPN 555
+ KGH V +F+ G Y + G DR RLW ++ + H +V V N
Sbjct: 13 ILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDN 72
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
+ + + G DR + WD TG +R GH V A+ F+ + SAG D ++ +WD
Sbjct: 73 AKFCSCGG-DRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDC 131
Query: 616 SNXXXX--XXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFA---KLSDEVGTEEVN 670
+ D V ++ ++ I+ S D +V+ +D ++SD +G + VN
Sbjct: 132 RSHSVEPVQIIDTFLDTVMSVVLTKT-EIIGGS-VDGTVRTFDMRIGREMSDNLG-QPVN 188
Query: 671 -LSHSAD 676
+S S D
Sbjct: 189 CISISND 195
Score = 134 (52.2 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 43/178 (24%), Positives = 71/178 (39%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +R+ + +T H VR + + D + SC D + W + R + +
Sbjct: 39 DRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKF 98
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLW--ATDSYHPLRLFVGHYSDVDCVQFHPNS 556
+GH V +KF+ SAG DR R+W + S P+++ V V
Sbjct: 99 RGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVL--TK 156
Query: 557 NYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+ GS D T+R +D G + G PV +S S G + + D + + D
Sbjct: 157 TEIIGGSVDGTVRTFDMRIGREMSDNLGQ--PVNCISISNDGNCVLAGCLDSTLRLLD 212
Score = 127 (49.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 49/195 (25%), Positives = 79/195 (40%)
Query: 389 QVTCAEISEDVSIL-AVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDE 447
+V + ++ S++ + GF S +++W ++ ++ D D M I+
Sbjct: 104 EVNAVKFNDSSSVVVSAGFDRS-LRVWDCRSHSVEPVQIIDTFLDTVMSVVLTKTEIIGG 162
Query: 448 RNAETTRTL---VGHE-----G-PVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
T RT +G E G PV +S S D + +L+ D+T+RL L VY
Sbjct: 163 SVDGTVRTFDMRIGREMSDNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVY 222
Query: 499 KGHGHPVW--DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNS 556
KGH + D + + D + W L F H V V +HP
Sbjct: 223 KGHISKSFKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKE 282
Query: 557 NYVATGSSDRTIRLW 571
+ + T S D TIR+W
Sbjct: 283 DCMLTSSVDGTIRVW 297
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 252 (93.8 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 92/317 (29%), Positives = 141/317 (44%)
Query: 371 GPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMK----- 425
G +L I C + N++ V C + +D I++ G ++ IK+W Q L+ +K
Sbjct: 211 GRHNLQRIQCRSE-NSKG-VYCLQYDDD-KIIS-GLRDNSIKIWD--KQSLECLKVLTGH 264
Query: 426 --SSDQLQ-D---IEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCS 479
S LQ D I D VR+ D + E TL+ H V L F L+++CS
Sbjct: 265 TGSVLCLQYDERVIVTGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRFC--NGLMVTCS 322
Query: 480 QDNTIRLWSLL------LWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDS 533
+D +I +W + L R LV GH V + F Y SA DR ++W+T +
Sbjct: 323 KDRSIAVWDMASATDISLRRVLV---GHRAAVNVVDFDDK--YIVSASGDRTIKVWSTST 377
Query: 534 YHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALS 593
+R GH + C+Q+ V +GSSD TIRLWD G+ +R+L GH+ V +
Sbjct: 378 CEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIR 435
Query: 594 FSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNI---------LA 644
F + + S DG + +WDL +R L G + +
Sbjct: 436 FD--NKRIVSGAYDGKIKVWDLQAALDPRAPASTL-CLRTLV-EHSGRVFRLQFDEFQII 491
Query: 645 SSGQDCSVKLWDFAKLS 661
SS D ++ +WDF +S
Sbjct: 492 SSSHDDTILIWDFLNVS 508
Score = 245 (91.3 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 64/228 (28%), Positives = 104/228 (45%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D ++I D+++ E + L GH G V L + D ++++ S D+T+R+W + L
Sbjct: 244 DNSIKIWDKQSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVSSGEVLNTL 301
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLW----ATDSYHPLRLFVGHYSDVDCVQFHP 554
H V ++F +G + DR +W ATD R+ VGH + V+ V F
Sbjct: 302 IHHNEAVLHLRFC-NGL-MVTCSKDRSIAVWDMASATD-ISLRRVLVGHRAAVNVVDF-- 356
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+ Y+ + S DRTI++W T VR L GHK + L + R + S D + +WD
Sbjct: 357 DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWD 414
Query: 615 LSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSD 662
+ ++VR + F D + S D +K+WD D
Sbjct: 415 IECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALD 460
>TAIR|locus:2037798 [details] [associations]
symbol:PWP2 "AT1G15440" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0080008 HSSP:Q04724
HOGENOM:HOG000160363 KO:K14558 OMA:VWQCDTP InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003 EMBL:AY065425
EMBL:AY133789 IPI:IPI00543736 RefSeq:NP_172998.1 UniGene:At.28488
ProteinModelPortal:Q8VYZ5 SMR:Q8VYZ5 STRING:Q8VYZ5 PaxDb:Q8VYZ5
PRIDE:Q8VYZ5 EnsemblPlants:AT1G15440.1 GeneID:838115
KEGG:ath:AT1G15440 TAIR:At1g15440 InParanoid:Q8VYZ5
PhylomeDB:Q8VYZ5 ProtClustDB:CLSN2679476 ArrayExpress:Q8VYZ5
Genevestigator:Q8VYZ5 Uniprot:Q8VYZ5
Length = 900
Score = 239 (89.2 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 73/285 (25%), Positives = 120/285 (42%)
Query: 386 ARQQVTCAEISEDVSILAVGFSES----Y-------IKLWSLVPQKLKAMKSSDQLQDIE 434
A +VT + + + ++ VGFS Y I L S+ QKL +++ +
Sbjct: 303 ASAKVTACDYHQGLDMVVVGFSNGVFGLYQMPDFICIHLLSISRQKLTTAVFNERGNWLT 362
Query: 435 MECDDI-LVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWR 493
C + + + D R GH V +++SPD LL + + DN +++W+++
Sbjct: 363 FGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGT 422
Query: 494 CLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYS-DVDCVQF 552
C + + H + V + F + SA D R W Y + + +
Sbjct: 423 CFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTA 482
Query: 553 HPNSNYVATGSSDR-TIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVH 611
P+ + V G+ D I +W TG +L+GH+APV+ L FS + LAS+ D V
Sbjct: 483 DPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVR 542
Query: 612 MWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+WD+ V + F DG LASS D + WD
Sbjct: 543 LWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWD 587
Score = 137 (53.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 32/94 (34%), Positives = 42/94 (44%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
D + + ++ + L GHE PV L FSP LL S S D T+RLW + + V
Sbjct: 495 DSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVE 554
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWAT 531
H H V + F P G AS+ D W T
Sbjct: 555 TFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDT 588
Score = 67 (28.6 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 634 LCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKA 693
LC+S DG + ++G + ++D A D+V +SH+ + + L +L T+A
Sbjct: 627 LCYSADGGYILAAGTSRYICMYDIA---DQVLLRRFQISHNLSL-DGVLDFLHSKKMTEA 682
Query: 694 SPL 696
P+
Sbjct: 683 GPI 685
Score = 37 (18.1 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 592 LSFSVCGRFLASAGGDGNVHMWDLSN 617
L +S G ++ +AG + M+D+++
Sbjct: 627 LCYSADGGYILAAGTSRYICMYDIAD 652
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 254 (94.5 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 66/237 (27%), Positives = 110/237 (46%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D ++I D ++ +R L GH G V L + D +++S S D T+R+W + C+
Sbjct: 241 DNTIKIWDRKDYSCSRILSGHTGSVLCLQY--DNRVIISGSSDATVRVWDVETGECIKTL 298
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPL---RLFVGHYSDVDCVQFHPN 555
H V ++F+ +G + DR +W S + R+ VGH + V+ V F +
Sbjct: 299 IHHCEAVLHLRFA-NGI-MVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDF--D 354
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
Y+ + S DRTI++W T VR L GH+ + L + GR + S D + +WD+
Sbjct: 355 DRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYR--GRLVVSGSSDNTIRLWDI 412
Query: 616 SNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDF-AKLSDEVGTEEVNL 671
+ ++VR + F D + S D +K+WD A L + E+ L
Sbjct: 413 HSGVCLRVLEGHEELVRCIRF--DEKRIVSGAYDGKIKVWDLQAALDPRALSSEICL 467
Score = 250 (93.1 bits), Expect = 7.1e-18, P = 7.1e-18
Identities = 76/287 (26%), Positives = 127/287 (44%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECD---------DI 440
V C + +D I++ G ++ IK+W + S + ++ D D
Sbjct: 225 VYCLQYDDD-KIVS-GLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDNRVIISGSSDA 282
Query: 441 LVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYK- 499
VR+ D E +TL+ H V L F+ ++++CS+D +I +W ++ R + + +
Sbjct: 283 TVRVWDVETGECIKTLIHHCEAVLHLRFA--NGIMVTCSKDRSIAVWDMVSPRDITIRRV 340
Query: 500 --GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
GH V + F Y SA DR ++W+ D+ +R GH + C+Q+
Sbjct: 341 LVGHRAAVNVVDFDDR--YIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYR--GR 396
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
V +GSSD TIRLWD +G +R+L GH+ V + F + + S DG + +WDL
Sbjct: 397 LVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDE--KRIVSGAYDGKIKVWDLQA 454
Query: 618 XXXXXXXXXXX---DVV----RALCFSRDGNILASSGQDCSVKLWDF 657
+V R D + SS D ++ +WDF
Sbjct: 455 ALDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVSSSHDDTILIWDF 501
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 254 (94.5 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 66/237 (27%), Positives = 110/237 (46%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D ++I D ++ +R L GH G V L + D +++S S D T+R+W + C+
Sbjct: 241 DNTIKIWDRKDYSCSRILSGHTGSVLCLQY--DNRVIISGSSDATVRVWDVETGECIKTL 298
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPL---RLFVGHYSDVDCVQFHPN 555
H V ++F+ +G + DR +W S + R+ VGH + V+ V F +
Sbjct: 299 IHHCEAVLHLRFA-NGI-MVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDF--D 354
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
Y+ + S DRTI++W T VR L GH+ + L + GR + S D + +WD+
Sbjct: 355 DRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYR--GRLVVSGSSDNTIRLWDI 412
Query: 616 SNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDF-AKLSDEVGTEEVNL 671
+ ++VR + F D + S D +K+WD A L + E+ L
Sbjct: 413 HSGVCLRVLEGHEELVRCIRF--DEKRIVSGAYDGKIKVWDLQAALDPRALSSEICL 467
Score = 250 (93.1 bits), Expect = 7.1e-18, P = 7.1e-18
Identities = 76/287 (26%), Positives = 127/287 (44%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECD---------DI 440
V C + +D I++ G ++ IK+W + S + ++ D D
Sbjct: 225 VYCLQYDDD-KIVS-GLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDNRVIISGSSDA 282
Query: 441 LVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYK- 499
VR+ D E +TL+ H V L F+ ++++CS+D +I +W ++ R + + +
Sbjct: 283 TVRVWDVETGECIKTLIHHCEAVLHLRFA--NGIMVTCSKDRSIAVWDMVSPRDITIRRV 340
Query: 500 --GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
GH V + F Y SA DR ++W+ D+ +R GH + C+Q+
Sbjct: 341 LVGHRAAVNVVDFDDR--YIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYR--GR 396
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
V +GSSD TIRLWD +G +R+L GH+ V + F + + S DG + +WDL
Sbjct: 397 LVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDE--KRIVSGAYDGKIKVWDLQA 454
Query: 618 XXXXXXXXXXX---DVV----RALCFSRDGNILASSGQDCSVKLWDF 657
+V R D + SS D ++ +WDF
Sbjct: 455 ALDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVSSSHDDTILIWDF 501
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 255 (94.8 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 76/277 (27%), Positives = 128/277 (46%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQK-LKAMKS------SDQLQD--IEMECDDI 440
+TC + + I++ G ++ +K+WS V K L+ + S Q++D I D
Sbjct: 437 ITCLQFCGN-RIVS-GSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDR 494
Query: 441 LVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKG 500
+++ + E TL GH VR + R ++S S+D T+R+W + +CL V G
Sbjct: 495 TLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMG 552
Query: 501 HGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVA 560
H V +++ G S +D M ++W ++ L GH + V +QF + +V
Sbjct: 553 HVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVV 608
Query: 561 TGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXX 620
+GS D +IR+WD TG+ + LTGH++ + L S D V +WD+
Sbjct: 609 SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQC 666
Query: 621 XXXXXXXXDVVRAL-CFSRDGNILASSGQDCSVKLWD 656
A+ C + N + +S D +VKLWD
Sbjct: 667 LQTLQGPHKHQSAVTCLQFNKNFVITSSDDGTVKLWD 703
Score = 239 (89.2 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 62/207 (29%), Positives = 97/207 (46%)
Query: 451 ETTRTLVGHEGPVRK-LSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIK 509
++ + L GH+ V L F +R ++S S DNT+++WS + +CL GH VW +
Sbjct: 424 KSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 481
Query: 510 FSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIR 569
+ S DR ++W ++ + GH S V C+ H V +GS D T+R
Sbjct: 482 MRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLR 537
Query: 570 LWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXD 629
+WD TG + +L GH A V + + GR + S D V +WD +
Sbjct: 538 VWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTN 595
Query: 630 VVRALCFSRDGNILASSGQDCSVKLWD 656
V +L F DG + S D S+++WD
Sbjct: 596 RVYSLQF--DGIHVVSGSLDTSIRVWD 620
Score = 198 (74.8 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 47/180 (26%), Positives = 88/180 (48%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +R+ D + L+GH VR + + R ++S + D +++W CL
Sbjct: 533 DATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPETETCLHTL 590
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
+GH + V+ ++F G + S D R+W ++ + + GH S ++ N
Sbjct: 591 QGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNI 646
Query: 559 VATGSSDRTIRLWDCVTGSHVRLLTG---HKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
+ +G++D T+++WD TG ++ L G H++ V L F+ F+ ++ DG V +WDL
Sbjct: 647 LVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNK--NFVITSSDDGTVKLWDL 704
Score = 169 (64.5 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 45/147 (30%), Positives = 66/147 (44%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +V++ D TL GH V L F D ++S S D +IR+W + C+
Sbjct: 573 DFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTL 630
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVG---HYSDVDCVQFHPN 555
GH ++ + S D ++W + L+ G H S V C+QF N
Sbjct: 631 TGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQF--N 686
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVRLL 582
N+V T S D T++LWD TG +R L
Sbjct: 687 KNFVITSSDDGTVKLWDLRTGEFIRNL 713
Score = 144 (55.7 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 63/260 (24%), Positives = 109/260 (41%)
Query: 414 WSLVPQKLKAMKSSDQLQDIEMECDDI--LVRIMDERNAETTRTLVGHEGPVRKLSFSPD 471
WS P+KL A+ D+L D E + ++++++ + +L+ E + LSF
Sbjct: 297 WS-GPEKLLAL---DELID-SCEPTQVKHMMQVIEPQFQRDFISLLPRELALHVLSFLEP 351
Query: 472 RSLLLSCSQDNTIRLWSLL-----LWRCLVVYKGHGHPVWDIK----FSPHGYYFA--SA 520
+ LL + T R W +L LW+ +G P+ IK P G+ + +
Sbjct: 352 KDLLQAAQ---TCRYWRILAEDNLLWKEKCKEEGIDEPL-HIKRRKVIKP-GFTHSPWKS 406
Query: 521 GHDRMARL---WATDSYHPLRLFVGHYSDV-DCVQFHPNSNYVATGSSDRTIRLWDCVTG 576
+ R R+ W ++ GH V C+QF N + +GS D T+++W VTG
Sbjct: 407 AYIRQHRIDTNWRRGDLKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTG 464
Query: 577 SHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCF 636
+R L GH V+ S + + S D + +W+ VR C
Sbjct: 465 KCLRTLVGHTGGVW--SSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CM 520
Query: 637 SRDGNILASSGQDCSVKLWD 656
+ S +D ++++WD
Sbjct: 521 HLHEKRVVSGSRDATLRVWD 540
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 241 (89.9 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 63/216 (29%), Positives = 95/216 (43%)
Query: 447 ERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVW 506
E N +R L GH G + F D ++ S S D T LW + + + GH V
Sbjct: 130 EGNVRVSRELAGHTGYLSCCRFLDDNQIVTS-SGDTTCALWDIETGQQTTTFAGHTGDVM 188
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
+ +P F S D A+LW + F GH SD++ + F PN N ATGS D
Sbjct: 189 SLSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTGHESDINAICFFPNGNAFATGSDDA 248
Query: 567 TIRLWDC------VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXX 620
T RL+D + SH ++ G + +++FS GR L + D N ++WD
Sbjct: 249 TCRLFDLRADQELMVYSHDNIICG----ITSVAFSKSGRLLLAGYDDFNCNVWDTLKADR 304
Query: 621 XXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ V L + DG +A+ D +K+W+
Sbjct: 305 AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 232 (86.7 bits), Expect = 4.7e-17, P = 4.7e-17
Identities = 66/251 (26%), Positives = 103/251 (41%)
Query: 422 KAMKSSDQLQDIEMECDD-----ILVRI--MDERNAETTRTLVGHEGPVRKLSFSPDRSL 474
+A + +Q++D C D I I + T RTL GH + + + D L
Sbjct: 10 EAEQLKNQIRDARKACADATLSQITANIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRL 69
Query: 475 LLSCSQDNTIRLWSLLLWRCLVVYKGHGHPV---WDIK--FSPHGYYFASAGHDRMARLW 529
L+S SQD L++W K H P+ W + ++P G Y A G D + ++
Sbjct: 70 LVSASQDG-----KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124
Query: 530 ATDS----YHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH 585
+ + R GH + C +F + N + T S D T LWD TG GH
Sbjct: 125 SLKTREGNVRVSRELAGHTGYLSCCRFL-DDNQIVTSSGDTTCALWDIETGQQTTTFAGH 183
Query: 586 KAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILAS 645
V +LS + R S D + +WD+ + A+CF +GN A+
Sbjct: 184 TGDVMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTGHESDINAICFFPNGNAFAT 243
Query: 646 SGQDCSVKLWD 656
D + +L+D
Sbjct: 244 GSDDATCRLFD 254
Score = 181 (68.8 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 48/180 (26%), Positives = 75/180 (41%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D + D + T T GH G V LS +PD L +S + D + +LW + C +
Sbjct: 163 DTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTF 222
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC----VQFHP 554
GH + I F P+G FA+ D RL+ D L V + ++ C V F
Sbjct: 223 TGHESDINAICFFPNGNAFATGSDDATCRLF--DLRADQELMVYSHDNIICGITSVAFSK 280
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+ + G D +WD + +L GH V L + G +A+ D + +W+
Sbjct: 281 SGRLLLAGYDDFNCNVWDTLKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 154 (59.3 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 40/168 (23%), Positives = 70/168 (41%)
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + +F S+G D LW ++ F GH DV + P++
Sbjct: 141 GHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLF 199
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXX 619
+G+ D + +LWD G + TGH++ + A+ F G A+ D ++DL
Sbjct: 200 VSGACDASAKLWDIREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ 259
Query: 620 XXXXXXXXXDV--VRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVG 665
+ + ++ FS+ G +L + D + +WD K +D G
Sbjct: 260 ELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLK-ADRAG 306
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 251 (93.4 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 87/318 (27%), Positives = 138/318 (43%)
Query: 371 GPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK-LKAMKSSDQ 429
G +L I C + N++ V C + +D I++ G ++ IK+W + LK +
Sbjct: 194 GRHNLQRIQCRSE-NSKG-VYCLQY-DDEKIIS-GLRDNSIKIWDKTSLECLKVLTGHTG 249
Query: 430 ----LQ-D---IEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQD 481
LQ D I D VR+ D E TL+ H V L FS L+++CS+D
Sbjct: 250 SVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKD 307
Query: 482 NTIRLWSLLLWRCLVVYK---GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLR 538
+I +W + + + + GH V + F Y SA DR ++W+T + +R
Sbjct: 308 RSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVR 365
Query: 539 LFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCG 598
GH + C+Q+ V +GSSD TIRLWD G+ +R+L GH+ V + F
Sbjct: 366 TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--N 421
Query: 599 RFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNI---------LASSGQD 649
+ + S DG + +WDL +R L G + + SS D
Sbjct: 422 KRIVSGAYDGKIKVWDLQAALDPRAPASTL-CLRTLV-EHSGRVFRLQFDEFQIISSSHD 479
Query: 650 CSVKLWDFAKLSDEVGTE 667
++ +WDF + E
Sbjct: 480 DTILIWDFLNVPPSAQNE 497
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 251 (93.4 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 87/318 (27%), Positives = 138/318 (43%)
Query: 371 GPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK-LKAMKSSDQ 429
G +L I C + N++ V C + +D I++ G ++ IK+W + LK +
Sbjct: 194 GRHNLQRIQCRSE-NSKG-VYCLQY-DDEKIIS-GLRDNSIKIWDKTSLECLKVLTGHTG 249
Query: 430 ----LQ-D---IEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQD 481
LQ D I D VR+ D E TL+ H V L FS L+++CS+D
Sbjct: 250 SVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKD 307
Query: 482 NTIRLWSLLLWRCLVVYK---GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLR 538
+I +W + + + + GH V + F Y SA DR ++W+T + +R
Sbjct: 308 RSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVR 365
Query: 539 LFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCG 598
GH + C+Q+ V +GSSD TIRLWD G+ +R+L GH+ V + F
Sbjct: 366 TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--N 421
Query: 599 RFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNI---------LASSGQD 649
+ + S DG + +WDL +R L G + + SS D
Sbjct: 422 KRIVSGAYDGKIKVWDLQAALDPRAPASTL-CLRTLV-EHSGRVFRLQFDEFQIISSSHD 479
Query: 650 CSVKLWDFAKLSDEVGTE 667
++ +WDF + E
Sbjct: 480 DTILIWDFLNVPPSAQNE 497
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 251 (93.4 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 91/321 (28%), Positives = 139/321 (43%)
Query: 371 GPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK-LKAMKSSDQ 429
G +L I C + N++ V C + +D I++ G ++ IK+W + LK +
Sbjct: 199 GRHNLQRIQCRSE-NSKG-VYCLQY-DDEKIIS-GLRDNSIKIWDKTSLECLKVLTGHTG 254
Query: 430 ----LQ-D---IEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQD 481
LQ D I D VR+ D E TL+ H V L FS L+++CS+D
Sbjct: 255 SVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKD 312
Query: 482 NTIRLWSLL------LWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYH 535
+I +W + L R LV GH V + F Y SA DR ++W+T +
Sbjct: 313 RSIAVWDMASPTDITLRRVLV---GHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCE 367
Query: 536 PLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFS 595
+R GH + C+Q+ V +GSSD TIRLWD G+ +R+L GH+ V + F
Sbjct: 368 FVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD 425
Query: 596 VCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNI---------LASS 646
+ + S DG + +WDL +R L G + + SS
Sbjct: 426 --NKRIVSGAYDGKIKVWDLQAALDPRAPASTL-CLRTLV-EHSGRVFRLQFDEFQIISS 481
Query: 647 GQDCSVKLWDFAKLSDEVGTE 667
D ++ +WDF + E
Sbjct: 482 SHDDTILIWDFLNVPPSAPNE 502
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 230 (86.0 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 49/143 (34%), Positives = 69/143 (48%)
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
G A+ G D LW+ + + + GH S V+ V+ + + GS +IR+WD
Sbjct: 37 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 96
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRA 633
+R L GHKA + +L F G F+AS D N+ +WD+ VR
Sbjct: 97 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 156
Query: 634 LCFSRDGNILASSGQDCSVKLWD 656
L FS DG LAS+ D +VKLWD
Sbjct: 157 LRFSPDGKWLASAADDHTVKLWD 179
Score = 221 (82.9 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 50/162 (30%), Positives = 76/162 (46%)
Query: 456 LVGHEGPVRKLSFSPDRSLLLSCSQDNT-IRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG 514
+V H V L LL+ D+ + LWS+ C++ GH PV ++ +
Sbjct: 20 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 79
Query: 515 YYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCV 574
+ R+W ++ LR +GH +++ + FHP +VA+GS D I+LWD
Sbjct: 80 ELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR 139
Query: 575 TGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLS 616
V GH V L FS G++LASA D V +WDL+
Sbjct: 140 RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT 181
Score = 218 (81.8 bits), Expect = 6.1e-17, P = 6.1e-17
Identities = 44/157 (28%), Positives = 72/157 (45%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
DD V + +L GH PV + + L+++ SQ +IR+W L + L
Sbjct: 45 DDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRT 104
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
GH + + F P+G + AS D +LW + + GH V C++F P+
Sbjct: 105 LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK 164
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSF 594
++A+ + D T++LWD G + GH PV + F
Sbjct: 165 WLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 201
Score = 216 (81.1 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 50/166 (30%), Positives = 82/166 (49%)
Query: 401 ILAVGFSESYIKLWSL-VPQKLKAMKS-SDQLQDIEMECDDILV---------RIMDERN 449
+LA G + + LWS+ P + ++ + ++ + + + L+ R+ D
Sbjct: 39 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 98
Query: 450 AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIK 509
A+ RTL+GH+ + L F P + S SQD I+LW + C+ Y+GH V ++
Sbjct: 99 AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLR 158
Query: 510 FSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPN 555
FSP G + ASA D +LW + + F GH V+ V+FHPN
Sbjct: 159 FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN 204
Score = 138 (53.6 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 36/138 (26%), Positives = 60/138 (43%)
Query: 523 DRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN-YVATGSSDRTIRLWDCVTGSHVRL 581
DR A+ A + + V H S+V + S +ATG D + LW + +
Sbjct: 6 DRCAQAAAVAAVEEI---VAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS 62
Query: 582 LTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGN 641
LTGH +PV ++ + + + G++ +WDL + +L F G
Sbjct: 63 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE 122
Query: 642 ILASSGQDCSVKLWDFAK 659
+AS QD ++KLWD +
Sbjct: 123 FVASGSQDTNIKLWDIRR 140
Score = 120 (47.3 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 26/77 (33%), Positives = 39/77 (50%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +++ D R GH VR L FSPD L S + D+T++LW L + + +
Sbjct: 130 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 189
Query: 499 KGHGHPVWDIKFSPHGY 515
GH PV ++F P+ Y
Sbjct: 190 PGHTGPVNVVEFHPNEY 206
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 230 (86.0 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 60/221 (27%), Positives = 98/221 (44%)
Query: 439 DILVRIM---DERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCL 495
D LV++ DER E L GH+ V + SP +++ S S D IRLW L + +
Sbjct: 41 DDLVKVWKWSDER-LEMQWALEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQI 99
Query: 496 VVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPN 555
W + FSP + A+ H ++ ++ + + + P+
Sbjct: 100 RSIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPD 159
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
Y+A+G+ D I ++D TG + L GH P+ +L+FS + L +A DG + ++D+
Sbjct: 160 GKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDV 219
Query: 616 SNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ V + FS D SS D SVK+WD
Sbjct: 220 QHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWD 260
Score = 189 (71.6 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 38/135 (28%), Positives = 68/135 (50%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D ++ I D + TL GH P+R L+FS D LL++ S D I+++ +
Sbjct: 169 DGIINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATL 228
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
GHG V ++ FSP +F S+ D+ ++W + + F+ H V V+++ N +
Sbjct: 229 SGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNRNGSK 288
Query: 559 VATGSSDRTIRLWDC 573
+ + D+ I ++DC
Sbjct: 289 IVSVGDDQEIHVYDC 303
Score = 188 (71.2 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 63/248 (25%), Positives = 114/248 (45%)
Query: 469 SPDRS-LLLSCSQDNTIRLWSLLLWRCLVVYKGHGHP--VWDIKFSPHGYYFASAGHDRM 525
S D S L++S S D+ +++W R + + GH V + SP G AS+ D
Sbjct: 28 SNDGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVSPSGNIMASSSLDAH 87
Query: 526 ARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH 585
RLW +S +R D V F P+S ++ATGS + ++ TG L
Sbjct: 88 IRLWDLESGKQIRSIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTR 147
Query: 586 KAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILAS 645
+ ++++S G++LAS DG ++++D++ +R+L FS D +L +
Sbjct: 148 GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVT 207
Query: 646 SGQDCSVKLWDF--AKLSDEV---GTEEVNLSHSAD---IKNSSLAYLVRSYKTKASPLL 697
+ D +K++D A L+ + G+ +N++ S D +SS V+ + A +
Sbjct: 208 ASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSARTCV 267
Query: 698 HLIFSRRN 705
H ++
Sbjct: 268 HTFLDHQD 275
Score = 180 (68.4 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 53/220 (24%), Positives = 97/220 (44%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVR--KLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLV 496
D +R+ D + + R++ GPV ++FSPD L + S + ++ + +
Sbjct: 85 DAHIRLWDLESGKQIRSI--DAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEY 142
Query: 497 VYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNS 556
G + I +SP G Y AS D + ++ + L GH + + F +S
Sbjct: 143 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSTDS 202
Query: 557 NYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLS 616
+ T S D I+++D S L+GH + V ++FS S+ D +V +WD+S
Sbjct: 203 QLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVS 262
Query: 617 NXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
D V + ++R+G+ + S G D + ++D
Sbjct: 263 ARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVYD 302
Score = 144 (55.7 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 29/104 (27%), Positives = 54/104 (51%)
Query: 421 LKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQ 480
++++ S Q + DD ++I D ++A TL GH V ++FSPD + +S S
Sbjct: 193 IRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSS 252
Query: 481 DNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDR 524
D ++++W + C+ + H VW +K++ +G S G D+
Sbjct: 253 DKSVKVWDVSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQ 296
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 251 (93.4 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 87/318 (27%), Positives = 138/318 (43%)
Query: 371 GPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK-LKAMKSSDQ 429
G +L I C + N++ V C + +D I++ G ++ IK+W + LK +
Sbjct: 213 GRHNLQRIQCRSE-NSKG-VYCLQY-DDEKIIS-GLRDNSIKIWDKTSLECLKVLTGHTG 268
Query: 430 ----LQ-D---IEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQD 481
LQ D I D VR+ D E TL+ H V L FS L+++CS+D
Sbjct: 269 SVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKD 326
Query: 482 NTIRLWSLLLWRCLVVYK---GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLR 538
+I +W + + + + GH V + F Y SA DR ++W+T + +R
Sbjct: 327 RSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVR 384
Query: 539 LFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCG 598
GH + C+Q+ V +GSSD TIRLWD G+ +R+L GH+ V + F
Sbjct: 385 TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--N 440
Query: 599 RFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNI---------LASSGQD 649
+ + S DG + +WDL +R L G + + SS D
Sbjct: 441 KRIVSGAYDGKIKVWDLQAALDPRAPASTL-CLRTLV-EHSGRVFRLQFDEFQIISSSHD 498
Query: 650 CSVKLWDFAKLSDEVGTE 667
++ +WDF + E
Sbjct: 499 DTILIWDFLNVPPSAQNE 516
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 251 (93.4 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 87/318 (27%), Positives = 138/318 (43%)
Query: 371 GPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK-LKAMKSSDQ 429
G +L I C + N++ V C + +D I++ G ++ IK+W + LK +
Sbjct: 214 GRHNLQRIQCRSE-NSKG-VYCLQY-DDEKIIS-GLRDNSIKIWDKTSLECLKVLTGHTG 269
Query: 430 ----LQ-D---IEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQD 481
LQ D I D VR+ D E TL+ H V L FS L+++CS+D
Sbjct: 270 SVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKD 327
Query: 482 NTIRLWSLLLWRCLVVYK---GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLR 538
+I +W + + + + GH V + F Y SA DR ++W+T + +R
Sbjct: 328 RSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVR 385
Query: 539 LFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCG 598
GH + C+Q+ V +GSSD TIRLWD G+ +R+L GH+ V + F
Sbjct: 386 TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--N 441
Query: 599 RFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNI---------LASSGQD 649
+ + S DG + +WDL +R L G + + SS D
Sbjct: 442 KRIVSGAYDGKIKVWDLQAALDPRAPASTL-CLRTLV-EHSGRVFRLQFDEFQIISSSHD 499
Query: 650 CSVKLWDFAKLSDEVGTE 667
++ +WDF + E
Sbjct: 500 DTILIWDFLNVPPSAQNE 517
>UNIPROTKB|G4MNI3 [details] [associations]
symbol:MGG_05616 "Pre-mRNA-splicing factor prp46"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 KO:K12862 RefSeq:XP_003710501.1
ProteinModelPortal:G4MNI3 EnsemblFungi:MGG_05616T0 GeneID:2675862
KEGG:mgr:MGG_05616 Uniprot:G4MNI3
Length = 510
Score = 250 (93.1 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 61/202 (30%), Positives = 88/202 (43%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
R + GH G VR L+ PD S + D TI++W L R + GH V + SP
Sbjct: 195 RVISGHLGWVRALAVEPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHISTVRGLAVSPR 254
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
Y S D+M + W ++ +R + GH S V + HP + + TG D R+WD
Sbjct: 255 HPYLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRDGVARVWDM 314
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRA 633
T S++ +L+GH V L + + D V MWDL+ VRA
Sbjct: 315 RTRSNIHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGKTMGVLTHHKKGVRA 374
Query: 634 LCFSRDGNILASSGQDCSVKLW 655
L + +SG S+K W
Sbjct: 375 LA-THPTEFTFASGSAGSIKQW 395
Score = 245 (91.3 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 62/222 (27%), Positives = 97/222 (43%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D ++I D + TL GH VR L+ SP L SC++D ++ W L + + Y
Sbjct: 222 DRTIKIWDLASGRLRLTLTGHISTVRGLAVSPRHPYLFSCAEDKMVKCWDLETNKVIRHY 281
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLW---ATDSYHPLRLFVGHYSDVDCVQFHPN 555
GH V+ + P + G D +AR+W + H L G S++ C + P
Sbjct: 282 HGHLSGVYTLALHPTLDVLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVSELVCQEADPQ 341
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
V TGS D T+R+WD G + +LT HK V AL+ F ++G G++ W
Sbjct: 342 ---VITGSLDSTVRMWDLAAGKTMGVLTHHKKGVRALATHPT-EFTFASGSAGSIKQWKC 397
Query: 616 SNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDF 657
++ L + D N+ S + S+ WD+
Sbjct: 398 PEGAFMQNFEGHNSIINTLSVN-DQNVFFSGADNGSMSFWDW 438
Score = 184 (69.8 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 48/169 (28%), Positives = 72/169 (42%)
Query: 492 WRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRL-FVGHYSDVDCV 550
W+ + V GH V + P +FAS DR ++W S LRL GH S V +
Sbjct: 191 WKLMRVISGHLGWVRALAVEPDNKWFASGAGDRTIKIWDLASGR-LRLTLTGHISTVRGL 249
Query: 551 QFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNV 610
P Y+ + + D+ ++ WD T +R GH + VY L+ L + G DG
Sbjct: 250 AVSPRHPYLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRDGVA 309
Query: 611 HMWDLSNXXXXXXXXXXXDVVRAL-CFSRDGNILASSGQDCSVKLWDFA 658
+WD+ V L C D ++ S D +V++WD A
Sbjct: 310 RVWDMRTRSNIHVLSGHTGTVSELVCQEADPQVITGS-LDSTVRMWDLA 357
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 48/173 (27%), Positives = 75/173 (43%)
Query: 537 LRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRL-LTGHKAPVYALSFS 595
+R+ GH V + P++ + A+G+ DRTI++WD +G +RL LTGH + V L+ S
Sbjct: 194 MRVISGHLGWVRALAVEPDNKWFASGAGDRTIKIWDLASG-RLRLTLTGHISTVRGLAVS 252
Query: 596 VCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
+L S D V WDL V L ++L + G+D ++W
Sbjct: 253 PRHPYLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRDGVARVW 312
Query: 656 DFAK------LSDEVGTEEVNLSHSAD--IKNSSLAYLVRSYKTKASPLLHLI 700
D LS GT + AD + SL VR + A + ++
Sbjct: 313 DMRTRSNIHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGKTMGVL 365
Score = 147 (56.8 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 50/236 (21%), Positives = 94/236 (39%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSS--DQLQDIEME--------C-D 438
V + D A G + IK+W L +L+ + ++ + + C +
Sbjct: 204 VRALAVEPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHISTVRGLAVSPRHPYLFSCAE 263
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +V+ D + R GH V L+ P +L++ +D R+W + + V
Sbjct: 264 DKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRDGVARVWDMRTRSNIHVL 323
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
GH V ++ + D R+W + + + H V + HP
Sbjct: 324 SGHTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGKTMGVLTHHKKGVRALATHPTEFT 383
Query: 559 VATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
A+GS+ +I+ W C G+ ++ GH + + LS + F + A +G++ WD
Sbjct: 384 FASGSAG-SIKQWKCPEGAFMQNFEGHNSIINTLSVNDQNVFFSGAD-NGSMSFWD 437
Score = 141 (54.7 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 46/226 (20%), Positives = 86/226 (38%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
+D +V+ D + R GH V L+ P +L++ +D R+W + + V
Sbjct: 263 EDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRDGVARVWDMRTRSNIHV 322
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
GH V ++ + D R+W + + + H V + HP
Sbjct: 323 LSGHTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGKTMGVLTHHKKGVRALATHPTEF 382
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
A+GS+ +I+ W C G+ ++ GH + + LS + F + A +G++ WD
Sbjct: 383 TFASGSAG-SIKQWKCPEGAFMQNFEGHNSIINTLSVNDQNVFFSGAD-NGSMSFWDWKT 440
Query: 618 XXXXXXXXXXXDV--------VRALCFSRDGNILASSGQDCSVKLW 655
+ F + G+ L D ++K+W
Sbjct: 441 GHRFQSLDTTAQPGSLQAESGIFTSTFDQSGSRLICGEADKTIKIW 486
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 253 (94.1 bits), Expect = 4.8e-18, Sum P(2) = 4.8e-18
Identities = 65/254 (25%), Positives = 108/254 (42%)
Query: 431 QDIEMEC-DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL 489
+DI + C +D L +++ T GH + F P L + S D T++LW L
Sbjct: 364 KDILVSCGEDRLWKVLGLPKCNVLLTGFGHTDWLSDCCFHPSGDKLATSSGDTTVKLWDL 423
Query: 490 LLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC 549
C++ ++GH VW + G + AS+ D+ +++W +S GH V+
Sbjct: 424 CKGDCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDVNSERCRCTLYGHTDSVNS 483
Query: 550 VQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGN 609
++F P SN + T S+D+T+ +WD TG + L GH + F G +AS G
Sbjct: 484 IEFFPFSNTLLTSSADKTLSIWDARTGICEQSLYGHMHSINDAIFDPRGHMIASCDACGV 543
Query: 610 VHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDF--AKLSDEVGTE 667
+WD + F G +LA + + + L D ++ +G E
Sbjct: 544 TKLWDFRKLLPIVSIDIGPSPGNEVNFDSSGRVLAQASGNGVIHLLDLKSGEIHKLMGHE 603
Query: 668 E----VNLSHSADI 677
V SH +I
Sbjct: 604 NEAHTVVFSHDGEI 617
Score = 246 (91.7 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 72/231 (31%), Positives = 103/231 (44%)
Query: 459 HEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL-LWRCLVVYKGHGHPVW--DIKFSPHGY 515
HE PV +S P + +L+SC +D RLW +L L +C V+ G GH W D F P G
Sbjct: 351 HELPVSCVSMQPHKDILVSCGED---RLWKVLGLPKCNVLLTGFGHTDWLSDCCFHPSGD 407
Query: 516 YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVT 575
A++ D +LW + F GH V +H N+VA+ S D+T ++WD V
Sbjct: 408 KLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWD-VN 466
Query: 576 GSHVRL-LTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRAL 634
R L GH V ++ F L ++ D + +WD +
Sbjct: 467 SERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGICEQSLYGHMHSINDA 526
Query: 635 CFSRDGNILASSGQDCSV-KLWDFAKL----SDEVGTE---EVNLSHSADI 677
F G+++AS C V KLWDF KL S ++G EVN S +
Sbjct: 527 IFDPRGHMIASCDA-CGVTKLWDFRKLLPIVSIDIGPSPGNEVNFDSSGRV 576
Score = 209 (78.6 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 46/161 (28%), Positives = 77/161 (47%)
Query: 497 VYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDV-DCVQFHPN 555
+++ H PV + PH S G DR+ ++ + L GH + DC FHP+
Sbjct: 347 IFRLHELPVSCVSMQPHKDILVSCGEDRLWKVLGLPKCNVLLTGFGHTDWLSDCC-FHPS 405
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
+ +AT S D T++LWD G + GH V++ ++ CG F+AS+ D +WD+
Sbjct: 406 GDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDV 465
Query: 616 SNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
++ D V ++ F N L +S D ++ +WD
Sbjct: 466 NSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWD 506
Score = 194 (73.4 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 53/217 (24%), Positives = 90/217 (41%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D V++ D + T GH V ++ + + S S D T ++W + RC
Sbjct: 415 DTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDVNSERCRCTL 474
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
GH V I+F P ++ D+ +W + + GH ++ F P +
Sbjct: 475 YGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGICEQSLYGHMHSINDAIFDPRGHM 534
Query: 559 VATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNX 618
+A+ + +LWD + + +P ++F GR LA A G+G +H+ DL +
Sbjct: 535 IASCDACGVTKLWDFRKLLPIVSIDIGPSPGNEVNFDSSGRVLAQASGNGVIHLLDLKSG 594
Query: 619 XXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
+ + FS DG IL S G D +V+ W
Sbjct: 595 EIHKLMGHENEA-HTVVFSHDGEILFSGGSDGTVRTW 630
Score = 44 (20.5 bits), Expect = 4.8e-18, Sum P(2) = 4.8e-18
Identities = 46/200 (23%), Positives = 83/200 (41%)
Query: 108 EEQLKKEINVNDLGIDPNDSEIGDLLSAYESE-GDPNLYEDAYQD--LKKFIENSLDVYK 164
EE L K I + D+EI + + S+ P + ED + +K + +LD ++
Sbjct: 73 EEDLAKAIQMAQE--QATDTEILERKTVLPSKHAVPEVIEDFLCNFLIKMGMTRTLDCFQ 130
Query: 165 ---YEL---GLV-LYPV--LVHMYIELVYNGHEHQATEMLHKHLMDHEPHYQEDLRKLSS 215
YEL G+ L V + +Y +++ +E++ + KH +EDL K+
Sbjct: 131 SEWYELIQKGVTELRTVGNVPDVYTQIMLLENENKNLKKDLKHYKQAADKAREDLLKIQK 190
Query: 216 VTKRDQIRTNEIAETFRSTEFI-----IRMSRDTLSLLKRHLQEKKHTVLLNIVQEHLYF 270
+RD R + + I +++ + R L EK HT+L + L
Sbjct: 191 --ERDFHRMHHKRIVQEKNKLINDLKGLKLHYASYEPTIRVLHEKHHTLLKEKMLTSLER 248
Query: 271 DMYEGEATR-QDNKAKIYYG 289
D G+ + Q+ K+ G
Sbjct: 249 DKVVGQISGLQETLKKLQRG 268
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 255 (94.8 bits), Expect = 4.8e-18, Sum P(2) = 4.8e-18
Identities = 63/209 (30%), Positives = 100/209 (47%)
Query: 463 VRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGH 522
+R + FSPD L + ++D IR+W + ++ GH ++ + F+ +G Y AS
Sbjct: 319 IRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSG 378
Query: 523 DRMARLWATDSYHPLRLFVGHYSD-VDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRL 581
D+ RLW D ++ D V V P+ YVA GS D+T+R+WD TG V
Sbjct: 379 DKTVRLW--DIAEGKLVYTLSIEDGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVER 436
Query: 582 LT---GHKAPVYALSFSVCGRFLASAGGDGNVHMWDLS------NXXXXX-----XXXXX 627
L GHK VY+++F+ G+ L S D + +W+L+ N
Sbjct: 437 LENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGH 496
Query: 628 XDVVRALCFSRDGNILASSGQDCSVKLWD 656
D V ++C + DG+ + S +D V+ WD
Sbjct: 497 KDFVLSVCLTPDGHWVMSGSKDRGVQFWD 525
Score = 205 (77.2 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 50/168 (29%), Positives = 84/168 (50%)
Query: 495 LVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSD------VD 548
LV + H V ++FS G Y A+ G +R A+++ + + D +
Sbjct: 262 LVHHLVHDSVVCCVRFSRDGKYLAT-GCNRSAQIFDVTLGQNVAVLQDESVDKSGDLYIR 320
Query: 549 CVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDG 608
V F P+ Y+ATG+ D+ IR+WD T + + +GH+ +Y+L F+ GR++AS GD
Sbjct: 321 SVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDK 380
Query: 609 NVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
V +WD++ D V + S DG +A+ D +V++WD
Sbjct: 381 TVRLWDIAEGKLVYTLSIE-DGVTTVAMSPDGLYVAAGSLDKTVRVWD 427
Score = 203 (76.5 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 63/235 (26%), Positives = 96/235 (40%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
+D +R+ D GHE + L F+ + + S S D T+RLW + + LV
Sbjct: 336 EDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEGK-LVY 394
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLW-ATDSYHPLRLFV--GHYSDVDCVQFHP 554
V + SP G Y A+ D+ R+W T Y RL GH V V F P
Sbjct: 395 TLSIEDGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAP 454
Query: 555 NSNYVATGSSDRTIRLWDCVT-----------GSHVRLLTGHKAPVYALSFSVCGRFLAS 603
N + +GS D+TI+LW+ G R GHK V ++ + G ++ S
Sbjct: 455 NGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMS 514
Query: 604 AGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFA 658
D V WD + V ++ S GN+ A+ D ++W ++
Sbjct: 515 GSKDRGVQFWDPITGNAQMMLQGHKNSVISVAPSPTGNLFATGSGDMRARIWRYS 569
Score = 147 (56.8 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 48/168 (28%), Positives = 78/168 (46%)
Query: 543 HYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAP----VYALS--FSV 596
H S V CV+F + Y+ATG + R+ +++D G +V +L +Y S FS
Sbjct: 268 HDSVVCCVRFSRDGKYLATGCN-RSAQIFDVTLGQNVAVLQDESVDKSGDLYIRSVCFSP 326
Query: 597 CGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
G++LA+ D + +WD++ + +L F+ +G +AS D +V+LWD
Sbjct: 327 DGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWD 386
Query: 657 FAK------LSDEVGTEEVNLSHSA-DIKNSSLAYLVRSYKTKASPLL 697
A+ LS E G V +S + SL VR + T L+
Sbjct: 387 IAEGKLVYTLSIEDGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLV 434
Score = 40 (19.1 bits), Expect = 4.8e-18, Sum P(2) = 4.8e-18
Identities = 8/17 (47%), Positives = 8/17 (47%)
Query: 71 YHTPPPSQTSKQSGKAP 87
Y PPP S GK P
Sbjct: 166 YGPPPPPTASPGPGKRP 182
>UNIPROTKB|E1BWK2 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031648 "protein destabilization"
evidence=IEA] [GO:0042347 "negative regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0042753 "positive regulation of
circadian rhythm" evidence=IEA] [GO:0045862 "positive regulation of
proteolysis" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 GeneTree:ENSGT00690000101849 OMA:FDQWSEA
EMBL:AADN02035964 EMBL:AADN02035965 EMBL:AADN02035966
IPI:IPI00818493 Ensembl:ENSGALT00000041199 ArrayExpress:E1BWK2
Uniprot:E1BWK2
Length = 523
Score = 249 (92.7 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 87/322 (27%), Positives = 138/322 (42%)
Query: 371 GPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK-LKAMKSS-- 427
G +L I C + N++ V C + +D I++ G ++ IK+W + LK +
Sbjct: 206 GRHNLQRIQCRSE-NSKG-VYCLQY-DDEKIIS-GLRDNSIKIWDKTSLECLKVLTGHTG 261
Query: 428 -------DQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQ 480
D+ + D + R+ D E TL+ H V L FS L+++CS+
Sbjct: 262 SVLCLQYDERVIVTGSSDSTVSRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSK 319
Query: 481 DNTIRLWSLL------LWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSY 534
D +I +W + L R LV GH V + F Y SA DR ++W+T +
Sbjct: 320 DRSIAVWDMASPTDITLRRVLV---GHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTC 374
Query: 535 HPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSF 594
+R GH + C+Q+ V +GSSD TIRLWD G+ +R+L GH+ V + F
Sbjct: 375 EFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 432
Query: 595 SVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNI---------LAS 645
+ + S DG + +WDL +R L G + + S
Sbjct: 433 D--NKRIVSGAYDGKIKVWDLQAALDPRAPASTL-CLRTLV-EHSGRVFRLQFDEFQIIS 488
Query: 646 SGQDCSVKLWDFAKLSDEVGTE 667
S D ++ +WDF + E
Sbjct: 489 SSHDDTILIWDFLNVPPSAPNE 510
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 247 (92.0 bits), Expect = 5.4e-18, P = 5.4e-18
Identities = 62/222 (27%), Positives = 96/222 (43%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D ++I + TL GH VR L+ SP L SC +D ++ W L + + Y
Sbjct: 164 DRTIKIWNLATGALRLTLTGHISTVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHY 223
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLW---ATDSYHPLRLFVGHYSDVDCVQFHPN 555
GH V+ + P + G D +AR+W + H L G +DV C + P
Sbjct: 224 HGHLSGVYTLALHPRLDLLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVADVQCQEADPQ 283
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
V TGS D T+RLWD G + +LT HK + +L+ F ++ G++ W
Sbjct: 284 ---VITGSLDATVRLWDLAAGKTMGVLTHHKKGIRSLATHP-REFTFASASTGSIKQWKC 339
Query: 616 SNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDF 657
++ L + D N+L S G + S+ WD+
Sbjct: 340 PGGEFMQNFEGHNAIINTLSVNED-NVLFSGGDNGSMSFWDW 380
Score = 234 (87.4 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 55/202 (27%), Positives = 88/202 (43%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
R + GH G VR L+ P+ S + D TI++W+L + GH V + SP
Sbjct: 137 RVISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVSPR 196
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
Y S G D+M + W ++ +R + GH S V + HP + + TG D R+WD
Sbjct: 197 HPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWDM 256
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRA 633
T S++ +L+GH V + + + D V +WDL+ +R+
Sbjct: 257 RTRSNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAGKTMGVLTHHKKGIRS 316
Query: 634 LCFSRDGNILASSGQDCSVKLW 655
L + +S S+K W
Sbjct: 317 LA-THPREFTFASASTGSIKQW 337
Score = 183 (69.5 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 49/171 (28%), Positives = 74/171 (43%)
Query: 492 WRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLW--ATDSYHPLRL-FVGHYSDVD 548
W+ + V GH V + P+ +FAS DR ++W AT + LRL GH S V
Sbjct: 133 WKLMRVISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGA---LRLTLTGHISTVR 189
Query: 549 CVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDG 608
+ P Y+ + D+ ++ WD T +R GH + VY L+ L + G DG
Sbjct: 190 GLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDG 249
Query: 609 NVHMWDLSNXXXXXXXXXXXDVVRAL-CFSRDGNILASSGQDCSVKLWDFA 658
+WD+ V + C D ++ S D +V+LWD A
Sbjct: 250 VARVWDMRTRSNIHVLSGHTGTVADVQCQEADPQVITGS-LDATVRLWDLA 299
Score = 160 (61.4 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 40/127 (31%), Positives = 62/127 (48%)
Query: 537 LRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRL-LTGHKAPVYALSFS 595
+R+ GH V + PN+ + A+G+ DRTI++W+ TG+ +RL LTGH + V L+ S
Sbjct: 136 MRVISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGA-LRLTLTGHISTVRGLAVS 194
Query: 596 VCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
+L S G D V WDL V L ++L + G+D ++W
Sbjct: 195 PRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVW 254
Query: 656 DFAKLSD 662
D S+
Sbjct: 255 DMRTRSN 261
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 43/177 (24%), Positives = 73/177 (41%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
+D +V+ D + R GH V L+ P LL++ +D R+W + + V
Sbjct: 205 EDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWDMRTRSNIHV 264
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
GH V D++ + D RLW + + + H + + HP
Sbjct: 265 LSGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAGKTMGVLTHHKKGIRSLATHPREF 324
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
A+ S+ +I+ W C G ++ GH A + LS + L S G +G++ WD
Sbjct: 325 TFASASTG-SIKQWKCPGGEFMQNFEGHNAIINTLSVNE-DNVLFSGGDNGSMSFWD 379
Score = 124 (48.7 bits), Expect = 0.00022, P = 0.00022
Identities = 40/183 (21%), Positives = 75/183 (40%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D + R+ D R L GH G V + +++ S D T+RLW L + + V
Sbjct: 248 DGVARVWDMRTRSNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAGKTMGVL 307
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
H + + P + FASA + + W ++ F GH + ++ + + + N
Sbjct: 308 THHKKGIRSLATHPREFTFASASTGSIKQ-WKCPGGEFMQNFEGHNAIINTLSVNED-NV 365
Query: 559 VATGSSDRTIRLWDCVTGSHVRLL--TGH------KAPVYALSFSVCGRFLASAGGDGNV 610
+ +G + ++ WD TG + + T +A + +F G L + D +
Sbjct: 366 LFSGGDNGSMSFWDWKTGYRYQTIDTTAQPGSLEAEAGIMTSTFDRTGLRLITGEADKTI 425
Query: 611 HMW 613
+W
Sbjct: 426 KVW 428
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 250 (93.1 bits), Expect = 6.0e-18, P = 6.0e-18
Identities = 61/206 (29%), Positives = 98/206 (47%)
Query: 463 VRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGH 522
VR ++FSPD L++ ++D I+LW L + V+ GH ++ + FS +G + S
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSG 422
Query: 523 DRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLL 582
DR ARLW ++ + L + + V + PN ++A GS D+ IR+W V+G+ V L
Sbjct: 423 DRTARLWDVETGQCI-LKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWS-VSGTLVERL 480
Query: 583 TGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXX------------XXXXXXXDV 630
GHK VY+++FS L S D + +W+L D
Sbjct: 481 EGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDF 540
Query: 631 VRALCFSRDGNILASSGQDCSVKLWD 656
V ++ S D S +D S++ WD
Sbjct: 541 VLSVAVSPDSRWGLSGSKDRSMQFWD 566
Score = 218 (81.8 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 61/230 (26%), Positives = 102/230 (44%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
+D +++ D + GHE + L FS + ++S S D T RLW + +C++
Sbjct: 380 EDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILK 439
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
+ + V I SP+ + A D++ R+W+ RL GH V + F P+S+
Sbjct: 440 LEIE-NGVTAIAISPNDQFIAVGSLDQIIRVWSVSGTLVERL-EGHKESVYSIAFSPDSS 497
Query: 558 YVATGSSDRTIRLWDCVTGSHVRL------------LTGHKAPVYALSFSVCGRFLASAG 605
+ +GS D+TI++W+ V L TGH V +++ S R+ S
Sbjct: 498 ILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGS 557
Query: 606 GDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
D ++ WDL + V ++CFS DG AS D ++W
Sbjct: 558 KDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIW 607
Score = 178 (67.7 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 48/163 (29%), Positives = 75/163 (46%)
Query: 503 HP--VWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVD--------CVQF 552
HP V +KFS +G Y A+ G ++ A ++ D +LF H D + F
Sbjct: 312 HPSVVCCVKFSNNGKYLAT-GCNQAANVF--DVQTGKKLFTLHEESPDPSRDLYVRTIAF 368
Query: 553 HPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHM 612
P+ Y+ TG+ DR I+LWD T + +GH+ +Y+L FS GRF+ S GD +
Sbjct: 369 SPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARL 428
Query: 613 WDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
WD+ V A+ S + +A D +++W
Sbjct: 429 WDVETGQCILKLEIENGVT-AIAISPNDQFIAVGSLDQIIRVW 470
Score = 178 (67.7 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 54/190 (28%), Positives = 80/190 (42%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV- 497
D R+ D + L G V ++ SP+ + S D IR+WS+ LV
Sbjct: 423 DRTARLWDVETGQCILKLEIENG-VTAIAISPNDQFIAVGSLDQIIRVWSVS--GTLVER 479
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRL------------FVGHYS 545
+GH V+ I FSP S D+ ++W + + L + GH
Sbjct: 480 LEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTD 539
Query: 546 DVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAG 605
V V P+S + +GS DR+++ WD TG GHK V ++ FS GR AS
Sbjct: 540 FVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGS 599
Query: 606 GDGNVHMWDL 615
GD +W +
Sbjct: 600 GDLRARIWSI 609
Score = 130 (50.8 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 455 TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG 514
T GH V ++ SPD LS S+D +++ W L + + +GH + V + FSP G
Sbjct: 533 TYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDG 592
Query: 515 YYFASAGHDRMARLWATDSYHP 536
FAS D AR+W+ D P
Sbjct: 593 RQFASGSGDLRARIWSIDPASP 614
Score = 56 (24.8 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 380 CYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSL---VPQKLKAMKSS 427
C L VT IS + +AVG + I++WS+ + ++L+ K S
Sbjct: 436 CILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVSGTLVERLEGHKES 486
Score = 46 (21.3 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 387 RQQVTCAEISEDVSILAVGFSESYIKLWSL 416
++ V S D SIL G + IK+W L
Sbjct: 484 KESVYSIAFSPDSSILLSGSLDKTIKVWEL 513
>UNIPROTKB|Q9W5Z5 [details] [associations]
symbol:wsb1 "WD repeat and SOCS box-containing protein 1"
species:31033 "Takifugu rubripes" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001496 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082 PROSITE:PS50225
PROSITE:PS50294 SMART:SM00253 SMART:SM00320 SMART:SM00969
UniPathway:UPA00143 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
CTD:26118 OrthoDB:EOG40ZQXJ EMBL:AF157597 EMBL:AF064564
RefSeq:NP_001027919.1 UniGene:Tru.1848 ProteinModelPortal:Q9W5Z5
STRING:Q9W5Z5 GeneID:445931 KEGG:tru:445931 InParanoid:Q9W5Z5
Uniprot:Q9W5Z5
Length = 427
Score = 245 (91.3 bits), Expect = 7.1e-18, P = 7.1e-18
Identities = 73/233 (31%), Positives = 105/233 (45%)
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLL-SCSQDNTIRLWSLLLWRCLV-VYK 499
++I D L+ H VR L+F+PD SL+L S S D +R+W L +V V
Sbjct: 157 IKIWDVYTGTLLLNLMDHTDIVRDLTFAPDGSLMLVSASTDKKLRVWDLKDDGNMVKVLW 216
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + V+ FSP S G + LW D Y +R GH++DV +F P+ +
Sbjct: 217 GHPNRVYSSAFSPDSSVLCSVGASKAVLLWNMDKYTLIRKLEGHHNDVVSCEFSPDGALL 276
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGH----KAPVYA----------LSFSVCGRFLASAG 605
AT S D + +WD GS + L GH +P++A +SF GR +AS
Sbjct: 277 ATASYDTRVIVWDHQRGS-ILLELGHLFPPPSPIFAGGANDRWVRSVSFCADGRHIASVS 335
Query: 606 GDGNVHMWDLSNXXXXXXXXXXXDVVRALC--FSRDGNILASSGQDCSVKLWD 656
D V W + + LC FS G++LA+ D SV W+
Sbjct: 336 DDRLVRFWSIEERAPQAVAS----LPNGLCCAFSTTGSVLAAGTCDGSVHFWE 384
Score = 163 (62.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 53/203 (26%), Positives = 86/203 (42%)
Query: 468 FSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG-YYFASAGHDRMA 526
F D+ LL + + I++W + L+ H V D+ F+P G SA D+
Sbjct: 141 FGRDQLLLATGLNNGRIKIWDVYTGTLLLNLMDHTDIVRDLTFAPDGSLMLVSASTDKKL 200
Query: 527 RLW-ATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH 585
R+W D + +++ GH + V F P+S+ + + + + + LW+ + +R L GH
Sbjct: 201 RVWDLKDDGNMVKVLWGHPNRVYSSAFSPDSSVLCSVGASKAVLLWNMDKYTLIRKLEGH 260
Query: 586 KAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXX------------XXXXXDV-VR 632
V + FS G LA+A D V +WD D VR
Sbjct: 261 HNDVVSCEFSPDGALLATASYDTRVIVWDHQRGSILLELGHLFPPPSPIFAGGANDRWVR 320
Query: 633 ALCFSRDGNILASSGQDCSVKLW 655
++ F DG +AS D V+ W
Sbjct: 321 SVSFCADGRHIASVSDDRLVRFW 343
Score = 162 (62.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 53/200 (26%), Positives = 86/200 (43%)
Query: 394 EISEDVSILAVGFSESYIKLWSLVPQKL--KAMKSSDQLQDIEMECDDILV--------- 442
+ D +LA G + IK+W + L M +D ++D+ D L+
Sbjct: 140 QFGRDQLLLATGLNNGRIKIWDVYTGTLLLNLMDHTDIVRDLTFAPDGSLMLVSASTDKK 199
Query: 443 -RIMDERN-AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKG 500
R+ D ++ + L GH V +FSPD S+L S + LW++ + + +G
Sbjct: 200 LRVWDLKDDGNMVKVLWGHPNRVYSSAFSPDSSVLCSVGASKAVLLWNMDKYTLIRKLEG 259
Query: 501 HGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVA 560
H + V +FSP G A+A +D +W + L +GH F P S A
Sbjct: 260 HHNDVVSCEFSPDGALLATASYDTRVIVW-DHQRGSILLELGHL-------FPPPSPIFA 311
Query: 561 TGSSDRTIRLWD-CVTGSHV 579
G++DR +R C G H+
Sbjct: 312 GGANDRWVRSVSFCADGRHI 331
Score = 129 (50.5 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 36/133 (27%), Positives = 57/133 (42%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLW-----SLLLWRCLV------VYKGHG 502
R L GH V FSPD +LL + S D + +W S+LL + ++ G
Sbjct: 255 RKLEGHHNDVVSCEFSPDGALLATASYDTRVIVWDHQRGSILLELGHLFPPPSPIFAGGA 314
Query: 503 HPVW--DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVA 560
+ W + F G + AS DR+ R W+ + P V + C F + +A
Sbjct: 315 NDRWVRSVSFCADGRHIASVSDDRLVRFWSIEERAPQA--VASLPNGLCCAFSTTGSVLA 372
Query: 561 TGSSDRTIRLWDC 573
G+ D ++ W+C
Sbjct: 373 AGTCDGSVHFWEC 385
>ZFIN|ZDB-GENE-050417-160 [details] [associations]
symbol:wdr38 "WD repeat domain 38" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-050417-160
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
HOGENOM:HOG000091642 CTD:401551 HOVERGEN:HBG106736
OrthoDB:EOG4ZW5BD EMBL:BC093164 IPI:IPI00570124
RefSeq:NP_001017672.1 UniGene:Dr.91594 ProteinModelPortal:Q567I2
STRING:Q567I2 GeneID:550366 KEGG:dre:550366 InParanoid:Q567I2
NextBio:20879618 Uniprot:Q567I2
Length = 216
Score = 226 (84.6 bits), Expect = 8.4e-18, P = 8.4e-18
Identities = 57/200 (28%), Positives = 84/200 (42%)
Query: 446 DERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPV 505
++ + + R H+ V +FSPD LLL+C + LW + L GH PV
Sbjct: 8 EDFSVDNIRYFSRHKAEVNCCAFSPDCQLLLTCCDAGKLYLWKTSTAKLLASVSGHTGPV 67
Query: 506 WDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSD 565
FS G FASA HD R W S H V+ V F P+ ++ +G D
Sbjct: 68 KCCVFSSDGRLFASASHDCSVRTWCNSSLKCTHTLTAHRRSVETVSFSPDGQWLLSGGWD 127
Query: 566 RTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXX 625
+W +G+ + L GH A V + FS + +A+ D V +W L +
Sbjct: 128 NRALIWSIQSGALLEELKGHNAAVQSSVFSSDSQSVATGSWDRAVRVWKLRDRQAEAVVL 187
Query: 626 XXX-DVVRALCFSRDGNILA 644
V LCFS G +++
Sbjct: 188 QGHLGNVACLCFSVAGMLVS 207
Score = 218 (81.8 bits), Expect = 6.1e-17, P = 6.1e-17
Identities = 60/198 (30%), Positives = 86/198 (43%)
Query: 406 FSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRK 465
FS I+ +S ++ S Q + CD + + A+ ++ GH GPV+
Sbjct: 10 FSVDNIRYFSRHKAEVNCCAFSPDCQLLLTCCDAGKLYLWKTSTAKLLASVSGHTGPVKC 69
Query: 466 LSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRM 525
FS D L S S D ++R W +C H V + FSP G + S G D
Sbjct: 70 CVFSSDGRLFASASHDCSVRTWCNSSLKCTHTLTAHRRSVETVSFSPDGQWLLSGGWDNR 129
Query: 526 ARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTG-SHVRLLTG 584
A +W+ S L GH + V F +S VATGS DR +R+W + +L G
Sbjct: 130 ALIWSIQSGALLEELKGHNAAVQSSVFSSDSQSVATGSWDRAVRVWKLRDRQAEAVVLQG 189
Query: 585 HKAPVYALSFSVCGRFLA 602
H V L FSV G ++
Sbjct: 190 HLGNVACLCFSVAGMLVS 207
Score = 150 (57.9 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 40/150 (26%), Positives = 62/150 (41%)
Query: 528 LWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKA 587
LW T + L GH V C F + A+ S D ++R W + LT H+
Sbjct: 48 LWKTSTAKLLASVSGHTGPVKCCVFSSDGRLFASASHDCSVRTWCNSSLKCTHTLTAHRR 107
Query: 588 PVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSG 647
V +SFS G++L S G D +W + + V++ FS D +A+
Sbjct: 108 SVETVSFSPDGQWLLSGGWDNRALIWSIQSGALLEELKGHNAAVQSSVFSSDSQSVATGS 167
Query: 648 QDCSVKLWDFAKLSDEVGTEEVNLSHSADI 677
D +V++W KL D V H ++
Sbjct: 168 WDRAVRVW---KLRDRQAEAVVLQGHLGNV 194
Score = 148 (57.2 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 41/144 (28%), Positives = 61/144 (42%)
Query: 537 LRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSV 596
+R F H ++V+C F P+ + T + LW T + ++GH PV FS
Sbjct: 15 IRYFSRHKAEVNCCAFSPDCQLLLTCCDAGKLYLWKTSTAKLLASVSGHTGPVKCCVFSS 74
Query: 597 CGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
GR ASA D +V W S+ V + FS DG L S G D +W
Sbjct: 75 DGRLFASASHDCSVRTWCNSSLKCTHTLTAHRRSVETVSFSPDGQWLLSGGWDNRALIWS 134
Query: 657 FAKLSDEVGTEEVNLSHSADIKNS 680
+ EE+ H+A +++S
Sbjct: 135 ---IQSGALLEELK-GHNAAVQSS 154
Score = 145 (56.1 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 50/178 (28%), Positives = 67/178 (37%)
Query: 387 RQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKS--SDQLQDIEMECD------ 438
+ +V C S D +L + LW KL A S + ++ D
Sbjct: 22 KAEVNCCAFSPDCQLLLTCCDAGKLYLWKTSTAKLLASVSGHTGPVKCCVFSSDGRLFAS 81
Query: 439 ---DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCL 495
D VR + + T TL H V +SFSPD LLS DN +WS+ L
Sbjct: 82 ASHDCSVRTWCNSSLKCTHTLTAHRRSVETVSFSPDGQWLLSGGWDNRALIWSIQSGALL 141
Query: 496 VVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWAT-DSYHPLRLFVGHYSDVDCVQF 552
KGH V FS A+ DR R+W D + GH +V C+ F
Sbjct: 142 EELKGHNAAVQSSVFSSDSQSVATGSWDRAVRVWKLRDRQAEAVVLQGHLGNVACLCF 199
Score = 112 (44.5 bits), Expect = 0.00094, P = 0.00094
Identities = 23/78 (29%), Positives = 36/78 (46%)
Query: 578 HVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFS 637
++R + HKA V +FS + L + G +++W S V+ FS
Sbjct: 14 NIRYFSRHKAEVNCCAFSPDCQLLLTCCDAGKLYLWKTSTAKLLASVSGHTGPVKCCVFS 73
Query: 638 RDGNILASSGQDCSVKLW 655
DG + AS+ DCSV+ W
Sbjct: 74 SDGRLFASASHDCSVRTW 91
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 246 (91.7 bits), Expect = 8.7e-18, P = 8.7e-18
Identities = 59/219 (26%), Positives = 95/219 (43%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +++I D + + +L GH VR ++ S L SC +D ++ W L + + Y
Sbjct: 193 DRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHPYLFSCGEDRQVKCWDLEYNKVIRHY 252
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
GH V+ + P A++G D AR+W + + GH + V V +
Sbjct: 253 HGHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQ 312
Query: 559 VATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNX 618
+ TGS D T+RLWD G V LT HK V ++ ASA D N+ W
Sbjct: 313 IITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLHPSLYMFASASPD-NIKQWRCPEG 371
Query: 619 XXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDF 657
+V + + +G +L S G + ++ WD+
Sbjct: 372 KFVQNISGHTSIVNCMAANSEG-VLVSGGDNGTMFFWDW 409
Score = 222 (83.2 bits), Expect = 4.1e-15, P = 4.1e-15
Identities = 56/204 (27%), Positives = 89/204 (43%)
Query: 453 TRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSP 512
+R + GH G VR ++ P + + D I++W L + + GH V + S
Sbjct: 165 SRVISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVST 224
Query: 513 -HGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLW 571
H Y F S G DR + W + +R + GH S V + HP + +AT D T R+W
Sbjct: 225 KHPYLF-SCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIW 283
Query: 572 DCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVV 631
D T ++V LTGH V ++ + + D V +WDL+ V
Sbjct: 284 DMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSV 343
Query: 632 RALCFSRDGNILASSGQDCSVKLW 655
R++ + AS+ D ++K W
Sbjct: 344 RSIVLHPSLYMFASASPD-NIKQW 366
Score = 181 (68.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 38/119 (31%), Positives = 58/119 (48%)
Query: 538 RLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVC 597
R+ GH V C+ P + + ATG+ DR I++WD +G LTGH + V ++ S
Sbjct: 166 RVISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTK 225
Query: 598 GRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+L S G D V WDL V +L ++LA+SG+D + ++WD
Sbjct: 226 HPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWD 284
Score = 181 (68.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 56/236 (23%), Positives = 93/236 (39%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSS--DQLQDIEME--------C-D 438
V C + A G + IK+W L KLK + ++ + + C +
Sbjct: 175 VRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHPYLFSCGE 234
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D V+ D + R GH V L+ P +L + +D+T R+W + +
Sbjct: 235 DRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKANVHTL 294
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
GH + V + + HD RLW + + H V + HP+
Sbjct: 295 TGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLHPSLYM 354
Query: 559 VATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
A+ S D I+ W C G V+ ++GH + V ++ + G L S G +G + WD
Sbjct: 355 FASASPDN-IKQWRCPEGKFVQNISGHTSIVNCMAANSEG-VLVSGGDNGTMFFWD 408
Score = 176 (67.0 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 57/248 (22%), Positives = 99/248 (39%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
+D V+ D + R GH V L+ P +L + +D+T R+W + +
Sbjct: 234 EDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKANVHT 293
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
GH + V + + HD RLW + + H V + HP+
Sbjct: 294 LTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLHPSLY 353
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
A+ S D I+ W C G V+ ++GH + V ++ + G L S G +G + WD
Sbjct: 354 MFASASPDN-IKQWRCPEGKFVQNISGHTSIVNCMAANSEG-VLVSGGDNGTMFFWDWRT 411
Query: 618 XXXXXXXXX-----XXDV---VRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEV 669
D + A+CF + G+ L ++ D ++K++ K DE E
Sbjct: 412 GYNFQRFQAPVQPGSMDSEAGIFAMCFDQSGSRLITAEADKTIKVY---KEDDEASEESH 468
Query: 670 NLSHSADI 677
++ D+
Sbjct: 469 PINWRPDL 476
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 248 (92.4 bits), Expect = 9.6e-18, P = 9.6e-18
Identities = 57/178 (32%), Positives = 91/178 (51%)
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGH 501
V ++ + NA+TT L +R + FSPD L + ++D IR+W + + + GH
Sbjct: 333 VCVLQDDNADTTGDLY-----IRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGH 387
Query: 502 GHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVAT 561
++ + F+ G AS DR RLW ++ L +F V V P++ YVA
Sbjct: 388 EQDIYSLDFARDGRTIASGSGDRTVRLWDIENGTALTVFTIE-DGVTTVAISPDTKYVAA 446
Query: 562 GSSDRTIRLWDCVTGSHVRLLTG---HKAPVYALSFSVCGRFLASAGGDGNVHMWDLS 616
GS D+++R+WD G V L G HK VY+++FS GR L + D + +W+L+
Sbjct: 447 GSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELA 504
Score = 206 (77.6 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 64/246 (26%), Positives = 103/246 (41%)
Query: 438 DDILVRIMDERNAETTRTL----VGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWR 493
+D +R+ D TTRT+ GHE + L F+ D + S S D T+RLW +
Sbjct: 366 EDKQIRVWDI----TTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWDIENGT 421
Query: 494 CLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVG---HYSDVDCV 550
L V+ V + SP Y A+ D+ R+W P+ G H V V
Sbjct: 422 ALTVFTIEDG-VTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSV 480
Query: 551 QFHPNSNYVATGSSDRTIRLWDCVT--------GSH----VRLLTGHKAPVYALSFSVCG 598
F PN + TGS D+TI+LW+ T GS V+ GH+ V +++ +
Sbjct: 481 AFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDN 540
Query: 599 RFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFA 658
+++ S D V WD + V ++ S G A+ D ++W +
Sbjct: 541 QWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFFATGSGDMRARIWSYT 600
Query: 659 KLSDEV 664
++ + +
Sbjct: 601 RMDNRM 606
Score = 203 (76.5 bits), Expect = 8.3e-13, P = 8.3e-13
Identities = 50/166 (30%), Positives = 84/166 (50%)
Query: 501 HGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSD------VDCVQFHP 554
H V ++FS G Y A+ G +R A+++ ++ + + +D + V F P
Sbjct: 298 HESVVCCVRFSADGKYVAT-GCNRSAQIFDVNTGEKVCVLQDDNADTTGDLYIRSVCFSP 356
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRL-LTGHKAPVYALSFSVCGRFLASAGGDGNVHMW 613
+ Y+ATG+ D+ IR+WD T + +R+ GH+ +Y+L F+ GR +AS GD V +W
Sbjct: 357 DGKYLATGAEDKQIRVWDITTRT-IRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLW 415
Query: 614 DLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659
D+ N D V + S D +A+ D SV++WD +
Sbjct: 416 DIENGTALTVFTIE-DGVTTVAISPDTKYVAAGSLDKSVRVWDLTQ 460
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 246 (91.7 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 62/227 (27%), Positives = 105/227 (46%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D ++I D + + +TL+GH G V L + D +++S S D+T+R+W + +
Sbjct: 229 DNTIKIWDRTDLQCVKTLMGHTGSVLCLQY--DDKVIISGSSDSTVRVWDVNTGEMVNTL 286
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPL---RLFVGHYSDVDCVQFHPN 555
H V ++F+ +G + DR +W S + R+ VGH + V+ V F +
Sbjct: 287 IHHCEAVLHLRFN-NGM-MVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDF--D 342
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
Y+ + S DRTI++W T VR L GHK + L + R + S D ++ +WD+
Sbjct: 343 EKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNSIRLWDI 400
Query: 616 SNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSD 662
++VR + F D + S D +K+WD D
Sbjct: 401 ECGACLRVLEGHEELVRCIRF--DTKRIVSGAYDGKIKVWDLVAALD 445
Score = 237 (88.5 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 84/292 (28%), Positives = 128/292 (43%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVP-QKLKAMKSSD------QLQD--IEMECDDI 440
V C + +D I++ G ++ IK+W Q +K + Q D I D
Sbjct: 213 VYCLQY-DDGKIVS-GLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYDDKVIISGSSDS 270
Query: 441 LVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL------LWRC 494
VR+ D E TL+ H V L F+ ++++CS+D +I +W + L R
Sbjct: 271 TVRVWDVNTGEMVNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMTSPSEITLRRV 328
Query: 495 LVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHP 554
LV GH V + F Y SA DR ++W+T + +R GH + C+Q+
Sbjct: 329 LV---GHRAAVNVVDFDEK--YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR- 382
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
V +GSSD +IRLWD G+ +R+L GH+ V + F + + S DG + +WD
Sbjct: 383 -DRLVVSGSSDNSIRLWDIECGACLRVLEGHEELVRCIRFDT--KRIVSGAYDGKIKVWD 439
Query: 615 L---------SNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDF 657
L SN V L F D + SS D ++ +WDF
Sbjct: 440 LVAALDPRAASNTLCLNTLVEHTGRVFRLQF--DEFQIVSSSHDDTILIWDF 489
>WB|WBGene00010556 [details] [associations]
symbol:rack-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000281 "cytokinesis
after mitosis" evidence=IMP] [GO:0040038 "polar body extrusion
after meiotic divisions" evidence=IMP] [GO:0051304 "chromosome
separation" evidence=IMP] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IGI;IMP] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0044297 "cell body"
evidence=IDA] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0005635 GO:GO:0005813 GO:GO:0000776
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426 GO:GO:0030334
GO:GO:0008045 GO:GO:0040035 GO:GO:0000281 GO:GO:0033365
GO:GO:0040038 GO:GO:0044297 GO:GO:0006997 GO:GO:0048675 EMBL:Z69664
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 PIR:T23309 RefSeq:NP_501859.1
ProteinModelPortal:Q21215 SMR:Q21215 DIP:DIP-26516N IntAct:Q21215
MINT:MINT-1071040 STRING:Q21215 World-2DPAGE:0020:Q21215
PaxDb:Q21215 PRIDE:Q21215 EnsemblMetazoa:K04D7.1.1
EnsemblMetazoa:K04D7.1.2 EnsemblMetazoa:K04D7.1.3
EnsemblMetazoa:K04D7.1.4 GeneID:177895 KEGG:cel:CELE_K04D7.1
UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1 InParanoid:Q21215
NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 233 (87.1 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 66/226 (29%), Positives = 102/226 (45%)
Query: 445 MDERNAETTRTLVGHEGPVRKLSFSP--DRSLLLSCSQDNTIRLWSL---------LLWR 493
M + + T TL GH G V +++ D++ +LS S+D TI +W + + R
Sbjct: 1 MVQEQMKLTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGR 60
Query: 494 CLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFH 553
+ GH H V D+ S G + S D+ RLW + R F+ H DV V F
Sbjct: 61 PVRSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFS 120
Query: 554 PNSNYVATGSSDRTIRLWDCVTGSHVRLLTG-HKAPVYALSFSVCGR--FLASAGGDGNV 610
++ + +GS D++I+LW+ + + H V + FS R + SAG D V
Sbjct: 121 ADNRQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVV 180
Query: 611 HMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+W+L N V + S DG++ AS G+D LWD
Sbjct: 181 KVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWD 226
Score = 210 (79.0 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 53/183 (28%), Positives = 88/183 (48%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +R+ D +TR + H V ++FS D ++S S+D +I+LW+ L +C
Sbjct: 90 DKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLA-QCKYTI 148
Query: 499 KGHGHPVW--DIKFSPHGY--YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHP 554
H W ++FSP SAG D++ ++W + +GH V+ V P
Sbjct: 149 TDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVSP 208
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+ + A+G D LWD G H+ L G+ + A+SFS +L +A G ++ +WD
Sbjct: 209 DGSLCASGGKDGQAMLWDLNEGKHLYTLPGNDV-INAMSFSPNRYWLCAAVGS-SIKIWD 266
Query: 615 LSN 617
L +
Sbjct: 267 LED 269
>UNIPROTKB|Q21215 [details] [associations]
symbol:rack-1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0005737
GO:GO:0018991 GO:GO:0040010 GO:GO:0005635 GO:GO:0005813
GO:GO:0000776 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426
GO:GO:0030334 GO:GO:0008045 GO:GO:0040035 GO:GO:0000281
GO:GO:0033365 GO:GO:0040038 GO:GO:0044297 GO:GO:0006997
GO:GO:0048675 EMBL:Z69664 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 PIR:T23309
RefSeq:NP_501859.1 ProteinModelPortal:Q21215 SMR:Q21215
DIP:DIP-26516N IntAct:Q21215 MINT:MINT-1071040 STRING:Q21215
World-2DPAGE:0020:Q21215 PaxDb:Q21215 PRIDE:Q21215
EnsemblMetazoa:K04D7.1.1 EnsemblMetazoa:K04D7.1.2
EnsemblMetazoa:K04D7.1.3 EnsemblMetazoa:K04D7.1.4 GeneID:177895
KEGG:cel:CELE_K04D7.1 UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1
InParanoid:Q21215 NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 233 (87.1 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 66/226 (29%), Positives = 102/226 (45%)
Query: 445 MDERNAETTRTLVGHEGPVRKLSFSP--DRSLLLSCSQDNTIRLWSL---------LLWR 493
M + + T TL GH G V +++ D++ +LS S+D TI +W + + R
Sbjct: 1 MVQEQMKLTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGR 60
Query: 494 CLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFH 553
+ GH H V D+ S G + S D+ RLW + R F+ H DV V F
Sbjct: 61 PVRSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFS 120
Query: 554 PNSNYVATGSSDRTIRLWDCVTGSHVRLLTG-HKAPVYALSFSVCGR--FLASAGGDGNV 610
++ + +GS D++I+LW+ + + H V + FS R + SAG D V
Sbjct: 121 ADNRQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVV 180
Query: 611 HMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+W+L N V + S DG++ AS G+D LWD
Sbjct: 181 KVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWD 226
Score = 210 (79.0 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 53/183 (28%), Positives = 88/183 (48%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +R+ D +TR + H V ++FS D ++S S+D +I+LW+ L +C
Sbjct: 90 DKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLA-QCKYTI 148
Query: 499 KGHGHPVW--DIKFSPHGY--YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHP 554
H W ++FSP SAG D++ ++W + +GH V+ V P
Sbjct: 149 TDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVSP 208
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
+ + A+G D LWD G H+ L G+ + A+SFS +L +A G ++ +WD
Sbjct: 209 DGSLCASGGKDGQAMLWDLNEGKHLYTLPGNDV-INAMSFSPNRYWLCAAVGS-SIKIWD 266
Query: 615 LSN 617
L +
Sbjct: 267 LED 269
>UNIPROTKB|Q9HAV0 [details] [associations]
symbol:GNB4 "Guanine nucleotide-binding protein subunit
beta-4" species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006112 "energy reserve metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006112 GO:GO:0004871
GO:GO:0071377 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 EMBL:AF300648 EMBL:AK001890
EMBL:BC000873 IPI:IPI00012451 RefSeq:NP_067642.1 UniGene:Hs.173030
ProteinModelPortal:Q9HAV0 SMR:Q9HAV0 IntAct:Q9HAV0
MINT:MINT-1135986 STRING:Q9HAV0 PhosphoSite:Q9HAV0 DMDM:22256759
OGP:Q9HAV0 PeptideAtlas:Q9HAV0 PRIDE:Q9HAV0 DNASU:59345
Ensembl:ENST00000232564 Ensembl:ENST00000468623 GeneID:59345
KEGG:hsa:59345 UCSC:uc003fjv.4 CTD:59345 GeneCards:GC03M179113
HGNC:HGNC:20731 HPA:CAB018383 HPA:CAB018737 MIM:610863
neXtProt:NX_Q9HAV0 PharmGKB:PA134864200 InParanoid:Q9HAV0 KO:K04538
OMA:GACDATS PhylomeDB:Q9HAV0 GenomeRNAi:59345 NextBio:65246
ArrayExpress:Q9HAV0 Bgee:Q9HAV0 CleanEx:HS_GNB4
Genevestigator:Q9HAV0 GermOnline:ENSG00000114450 Uniprot:Q9HAV0
Length = 340
Score = 233 (87.1 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 62/213 (29%), Positives = 92/213 (43%)
Query: 447 ERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVW 506
E N +R L GH G + F D ++ S S D T LW + + + GH V
Sbjct: 130 EGNVRVSRELPGHTGYLSCCRFLDDSQIVTS-SGDTTCALWDIETAQQTTTFTGHSGDVM 188
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
+ SP F S D ++LW + F GH SD++ V F PN ATGS D
Sbjct: 189 SLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYAFATGSDDA 248
Query: 567 TIRLWDCVTGSHVRLLTGHK---APVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXX 623
T RL+D + LL H + +++FS GR L + D N ++WD
Sbjct: 249 TCRLFDLRADQEL-LLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKGDRAGV 307
Query: 624 XXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ V L + DG +A+ D +++W+
Sbjct: 308 LAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN 340
Score = 220 (82.5 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 71/251 (28%), Positives = 106/251 (42%)
Query: 422 KAMKSSDQLQDIEMECDDI-LVRI---MDE--R-NAETTRTLVGHEGPVRKLSFSPDRSL 474
+A + +Q+QD C+D LV+I MD R T RTL GH + + + D L
Sbjct: 10 EAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYAMHWGYDSRL 69
Query: 475 LLSCSQDNTIRLWSLLLWRCLVVYKGHGHPV---WDIK--FSPHGYYFASAGHDRMARLW 529
L+S SQD L++W K H P+ W + ++P G Y A G D + ++
Sbjct: 70 LVSASQDG-----KLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124
Query: 530 ----ATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH 585
+ R GH + C +F +S V T S D T LWD T TGH
Sbjct: 125 NLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIV-TSSGDTTCALWDIETAQQTTTFTGH 183
Query: 586 KAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILAS 645
V +LS S R S D + +WD+ + + A+ F +G A+
Sbjct: 184 SGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYAFAT 243
Query: 646 SGQDCSVKLWD 656
D + +L+D
Sbjct: 244 GSDDATCRLFD 254
Score = 201 (75.8 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 58/231 (25%), Positives = 95/231 (41%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEM--ECDDILVRIMDE 447
V C + SI + E +++ +P + L D ++ D + D
Sbjct: 112 VACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDI 171
Query: 448 RNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWD 507
A+ T T GH G V LS SPD +S + D + +LW + C + GH +
Sbjct: 172 ETAQQTTTFTGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINA 231
Query: 508 IKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC----VQFHPNSNYVATGS 563
+ F P+GY FA+ D RL+ + L L+ H ++ C V F + + G
Sbjct: 232 VSFFPNGYAFATGSDDATCRLFDLRADQELLLY-SH-DNIICGITSVAFSKSGRLLLAGY 289
Query: 564 SDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
D +WD + G +L GH V L + G +A+ D + +W+
Sbjct: 290 DDFNCNVWDTLKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN 340
Score = 149 (57.5 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 41/168 (24%), Positives = 68/168 (40%)
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
GH + +F S+G D LW ++ F GH DV + P+
Sbjct: 141 GHTGYLSCCRFLDDSQIVTSSG-DTTCALWDIETAQQTTTFTGHSGDVMSLSLSPDMRTF 199
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXX 619
+G+ D + +LWD G + TGH + + A+SF G A+ D ++DL
Sbjct: 200 VSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYAFATGSDDATCRLFDLRADQ 259
Query: 620 XXXXXXXXXDV--VRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVG 665
+ + ++ FS+ G +L + D + +WD K D G
Sbjct: 260 ELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLK-GDRAG 306
Score = 40 (19.1 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 429 QLQDIEMECDDILVRIMDERNAETTRTLV 457
+L+ + E + + +I D R A TLV
Sbjct: 3 ELEQLRQEAEQLRNQIQDARKACNDATLV 31
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 252 (93.8 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 86/318 (27%), Positives = 138/318 (43%)
Query: 371 GPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLW---SLVPQKLKAMKSS 427
G +L I C + N++ V C + +D I++ G ++ IK+W SL K+ +
Sbjct: 211 GRHNLQRIQCRSE-NSKG-VYCLQYDDD-KIIS-GLRDNSIKIWDKSSLECLKVLTGHTG 266
Query: 428 DQL------QDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQD 481
L + I D VR+ D E TL+ H V L FS L+++CS+D
Sbjct: 267 SVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKD 324
Query: 482 NTIRLWSLLLWRCLVVYK---GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLR 538
+I +W + + + + GH V + F Y SA DR ++W+T + +R
Sbjct: 325 RSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVR 382
Query: 539 LFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCG 598
GH + C+Q+ V +GSSD TIRLWD G+ +R+L GH+ V + F
Sbjct: 383 TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--N 438
Query: 599 RFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNI---------LASSGQD 649
+ + S DG + +WDL +R L G + + SS D
Sbjct: 439 KRIVSGAYDGKIKVWDLQAALDPRAPASTL-CLRTLV-EHSGRVFRLQFDEFQIISSSHD 496
Query: 650 CSVKLWDFAKLSDEVGTE 667
++ +WDF + E
Sbjct: 497 DTILIWDFLNVPPSAQNE 514
Score = 37 (18.1 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 373 ESLPSIACYTLLNARQQV 390
+S+PS+ C + N V
Sbjct: 25 QSMPSVRCLQISNGTSSV 42
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 252 (93.8 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 86/318 (27%), Positives = 138/318 (43%)
Query: 371 GPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLW---SLVPQKLKAMKSS 427
G +L I C + N++ V C + +D I++ G ++ IK+W SL K+ +
Sbjct: 226 GRHNLQRIQCRSE-NSKG-VYCLQYDDD-KIIS-GLRDNSIKIWDKSSLECLKVLTGHTG 281
Query: 428 DQL------QDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQD 481
L + I D VR+ D E TL+ H V L FS L+++CS+D
Sbjct: 282 SVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKD 339
Query: 482 NTIRLWSLLLWRCLVVYK---GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLR 538
+I +W + + + + GH V + F Y SA DR ++W+T + +R
Sbjct: 340 RSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVR 397
Query: 539 LFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCG 598
GH + C+Q+ V +GSSD TIRLWD G+ +R+L GH+ V + F
Sbjct: 398 TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--N 453
Query: 599 RFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNI---------LASSGQD 649
+ + S DG + +WDL +R L G + + SS D
Sbjct: 454 KRIVSGAYDGKIKVWDLQAALDPRAPASTL-CLRTLV-EHSGRVFRLQFDEFQIISSSHD 511
Query: 650 CSVKLWDFAKLSDEVGTE 667
++ +WDF + E
Sbjct: 512 DTILIWDFLNVPPSAQNE 529
Score = 37 (18.1 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 373 ESLPSIACYTLLNARQQV 390
+S+PS+ C + N V
Sbjct: 40 QSMPSVRCLQISNGTSSV 57
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 244 (91.0 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 63/227 (27%), Positives = 103/227 (45%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D ++I D+ E R L GH G V L + D ++++ S D+T+R+W + L
Sbjct: 223 DNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNAGEMLNTL 280
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPL---RLFVGHYSDVDCVQFHPN 555
H V ++F+ +G + DR +W S + R+ VGH + V+ V F +
Sbjct: 281 IHHCEAVLHLRFN-NGM-MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--D 336
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
Y+ + S DRTI++W+ T VR L GHK + L + R + S D + +WD+
Sbjct: 337 DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDI 394
Query: 616 SNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSD 662
++VR + F D + S D +K+WD D
Sbjct: 395 ECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLMAALD 439
Score = 240 (89.5 bits), Expect = 4.7e-17, P = 4.7e-17
Identities = 97/355 (27%), Positives = 150/355 (42%)
Query: 330 KKTKSDPNAPPVD--RIPLPPL-KDSEKIDKLKALREATKRVTLGPESLPSIACYTLLNA 386
K D NAPP R P + +D E I E+ R G SL I C +
Sbjct: 155 KNKPPDENAPPNSFYRALYPKIIQDIETI-------ESNWRC--GRHSLQRIHCRS--ET 203
Query: 387 RQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECD-------- 438
+ V C + +D I++ G ++ IK+W + K + + + ++ D
Sbjct: 204 SKGVYCLQY-DDQKIVS-GLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGS 261
Query: 439 -DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL------L 491
D VR+ D E TL+ H V L F+ ++++CS+D +I +W + L
Sbjct: 262 SDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITL 319
Query: 492 WRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQ 551
R LV GH V + F Y SA DR ++W T + +R GH + C+Q
Sbjct: 320 RRVLV---GHRAAVNVVDFDDK--YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQ 374
Query: 552 FHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVH 611
+ V +GSSD TIRLWD G+ +R+L GH+ V + F + + S DG +
Sbjct: 375 YR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIK 430
Query: 612 MWDLSNXXXXXXXXXXXDVVRALCFSRDGNI---------LASSGQDCSVKLWDF 657
+WDL +R L G + + SS D ++ +WDF
Sbjct: 431 VWDLMAALDPRAPAGTL-CLRTLV-EHSGRVFRLQFDEFQIVSSSHDDTILIWDF 483
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 240 (89.5 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 61/218 (27%), Positives = 101/218 (46%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D V+I + + + V H VR + F L+L+ S D + ++W + + + +
Sbjct: 81 DRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARRQFVSSF 140
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
+ V KFSP+G A+A D+ R++ DS +R F + + +HP N
Sbjct: 141 AQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPWGNM 200
Query: 559 VATGSSDRTIRLWDCVTGSHV-RLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
+A I+++D V+GS + +L H APV ++F G FL S D + + DL
Sbjct: 201 LAVALGCNRIKIFD-VSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRILDLLE 259
Query: 618 XXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
D V A+ FSRDG+ A+ G D + +W
Sbjct: 260 GRPIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLLVW 297
Score = 232 (86.7 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 60/211 (28%), Positives = 97/211 (45%)
Query: 448 RNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL-LLWRCLVVYKGHGHPVW 506
R+ R GH G + +L F PD + + + S D+T+ LW+L RC + + H PV
Sbjct: 6 RDPALERHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARC-IRFASHSAPVN 64
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
+ +SP G ASAGHDR ++W FV H V V F + + T S D+
Sbjct: 65 GVAWSPKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDK 124
Query: 567 TIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXX 626
+ ++W V V + FS G+ +A+A D +V ++D+ +
Sbjct: 125 SAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTE 184
Query: 627 XXDVVRALCFSRDGNILASSGQDCS-VKLWD 656
R L + GN+LA + C+ +K++D
Sbjct: 185 ERAAPRQLAWHPWGNMLAVA-LGCNRIKIFD 214
Score = 215 (80.7 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 51/198 (25%), Positives = 88/198 (44%)
Query: 459 HEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFA 518
H PV +++SP +L+ S D T+++W L + H V + F G+
Sbjct: 59 HSAPVNGVAWSPKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLML 118
Query: 519 SAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH 578
+A D+ A++W + F + V +F PN VAT S D+++R++D +G
Sbjct: 119 TASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGEC 178
Query: 579 VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSR 638
VR T +A L++ G LA A G + ++D+S V + F
Sbjct: 179 VRTFTEERAAPRQLAWHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHP 238
Query: 639 DGNILASSGQDCSVKLWD 656
G+ L S D ++++ D
Sbjct: 239 SGHFLLSGSDDRTIRILD 256
Score = 168 (64.2 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 43/151 (28%), Positives = 70/151 (46%)
Query: 421 LKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQ 480
+++ K S + + DD VRI D + E RT R+L++ P ++L
Sbjct: 147 VRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPWGNMLAVALG 206
Query: 481 DNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLF 540
N I+++ + + L +Y H PV D+ F P G++ S DR R+ P+
Sbjct: 207 CNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRILDLLEGRPIYTL 266
Query: 541 VGHYSDVDCVQFHPNSNYVATGSSDRTIRLW 571
GH V+ V F + + ATG SDR + +W
Sbjct: 267 TGHTDAVNAVAFSRDGDKFATGGSDRQLLVW 297
Score = 166 (63.5 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 35/122 (28%), Positives = 59/122 (48%)
Query: 538 RLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVC 597
R F GH + ++F P+ +AT S+D T+ LW+ + H APV +++S
Sbjct: 12 RHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSPK 71
Query: 598 GRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDF 657
G +ASAG D V +W+ VR++ F G+++ ++ D S K+W
Sbjct: 72 GNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRV 131
Query: 658 AK 659
A+
Sbjct: 132 AR 133
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 31/91 (34%), Positives = 45/91 (49%)
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGH 501
++I D ++ + V H PV ++F P LLS S D TIR+ LL R + GH
Sbjct: 210 IKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRILDLLEGRPIYTLTGH 269
Query: 502 GHPVWDIKFSPHGYYFASAGHDRMARLWATD 532
V + FS G FA+ G DR +W ++
Sbjct: 270 TDAVNAVAFSRDGDKFATGGSDRQLLVWQSN 300
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 248 (92.4 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 60/222 (27%), Positives = 101/222 (45%)
Query: 390 VTCAEISEDVS-ILAVGFSESYIKLWSL-VPQKLKAMKS-SDQLQDIEMECDDILV---- 442
V C +I S +L G + + LW++ P + ++ S + + + ++LV
Sbjct: 19 VNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGA 78
Query: 443 -----RIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
++ D A+ RTL GH + F P S S D +++W + C+
Sbjct: 79 ASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHT 138
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
YKGH V ++F+P G + S G D + ++W + L F H + + FHP+
Sbjct: 139 YKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEF 198
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGR 599
+ATGS+DRT++ WD T + A V LSF+ G+
Sbjct: 199 LLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGK 240
Score = 223 (83.6 bits), Expect = 9.4e-15, P = 9.4e-15
Identities = 54/223 (24%), Positives = 95/223 (42%)
Query: 455 TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG 514
+L GH + ++F L+ + + TI+LW L + + GH + F P G
Sbjct: 54 SLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
Query: 515 YYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCV 574
+FAS D ++W + + GH V+ ++F P+ +V +G D +++WD
Sbjct: 114 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLT 173
Query: 575 TGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRAL 634
G + H+ + +L F LA+ D V WDL VR L
Sbjct: 174 AGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCL 233
Query: 635 CFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADI 677
F+ DG + Q+ S+K++ + + G + V S +D+
Sbjct: 234 SFNPDGKTVLCGLQE-SLKIFSWEPIRCHDGVD-VGWSRLSDM 274
Score = 215 (80.7 bits), Expect = 7.0e-14, P = 7.0e-14
Identities = 50/152 (32%), Positives = 70/152 (46%)
Query: 519 SAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH 578
+ G D LWA + + GH S +D V F + VA G++ TI+LWD
Sbjct: 34 TGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKI 93
Query: 579 VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSR 638
VR LTGH++ ++ F G F AS D N+ +WD+ V L F+
Sbjct: 94 VRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTP 153
Query: 639 DGNILASSGQDCSVKLWDFA--KLSDEVGTEE 668
DG + S G+D VK+WD KL E + E
Sbjct: 154 DGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHE 185
Score = 165 (63.1 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 44/184 (23%), Positives = 78/184 (42%)
Query: 401 ILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECD-----------DILVRIMDERN 449
++A G + IKLW L K+ + + I ++ D ++I D R
Sbjct: 73 LVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK 132
Query: 450 AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIK 509
T GH V L F+PD ++S +DN +++W L + L +K H + +
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLD 192
Query: 510 FSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRT-I 568
F PH + A+ DR + W +++ + + V C+ F+P+ V G + I
Sbjct: 193 FHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQESLKI 252
Query: 569 RLWD 572
W+
Sbjct: 253 FSWE 256
Score = 139 (54.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 31/130 (23%), Positives = 56/130 (43%)
Query: 531 TDSYHPLRLFVGHYSDVDCVQF-HPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPV 589
T + L+ FV H + V+C++ +S + TG D + LW + + L GH + +
Sbjct: 3 TKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGI 62
Query: 590 YALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQD 649
+++F +A+ G + +WDL ++ F G AS D
Sbjct: 63 DSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
Query: 650 CSVKLWDFAK 659
++K+WD K
Sbjct: 123 TNLKIWDIRK 132
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 251 (93.4 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 87/318 (27%), Positives = 138/318 (43%)
Query: 371 GPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK-LKAMKSSDQ 429
G +L I C + N++ V C + +D I++ G ++ IK+W + LK +
Sbjct: 226 GRHNLQRIQCRSE-NSKG-VYCLQY-DDEKIIS-GLRDNSIKIWDKTSLECLKVLTGHTG 281
Query: 430 ----LQ-D---IEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQD 481
LQ D I D VR+ D E TL+ H V L FS L+++CS+D
Sbjct: 282 SVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKD 339
Query: 482 NTIRLWSLLLWRCLVVYK---GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLR 538
+I +W + + + + GH V + F Y SA DR ++W+T + +R
Sbjct: 340 RSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVR 397
Query: 539 LFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCG 598
GH + C+Q+ V +GSSD TIRLWD G+ +R+L GH+ V + F
Sbjct: 398 TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--N 453
Query: 599 RFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNI---------LASSGQD 649
+ + S DG + +WDL +R L G + + SS D
Sbjct: 454 KRIVSGAYDGKIKVWDLQAALDPRAPASTL-CLRTLV-EHSGRVFRLQFDEFQIISSSHD 511
Query: 650 CSVKLWDFAKLSDEVGTE 667
++ +WDF + E
Sbjct: 512 DTILIWDFLNVPPSAQNE 529
Score = 37 (18.1 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 373 ESLPSIACYTLLNARQQV 390
+S+PS+ C + N V
Sbjct: 40 QSMPSVRCLQISNGTSSV 57
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 251 (93.4 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 87/318 (27%), Positives = 138/318 (43%)
Query: 371 GPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQK-LKAMKSSDQ 429
G +L I C + N++ V C + +D I++ G ++ IK+W + LK +
Sbjct: 226 GRHNLQRIQCRSE-NSKG-VYCLQY-DDEKIIS-GLRDNSIKIWDKTSLECLKVLTGHTG 281
Query: 430 ----LQ-D---IEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQD 481
LQ D I D VR+ D E TL+ H V L FS L+++CS+D
Sbjct: 282 SVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKD 339
Query: 482 NTIRLWSLLLWRCLVVYK---GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLR 538
+I +W + + + + GH V + F Y SA DR ++W+T + +R
Sbjct: 340 RSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVR 397
Query: 539 LFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCG 598
GH + C+Q+ V +GSSD TIRLWD G+ +R+L GH+ V + F
Sbjct: 398 TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--N 453
Query: 599 RFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNI---------LASSGQD 649
+ + S DG + +WDL +R L G + + SS D
Sbjct: 454 KRIVSGAYDGKIKVWDLQAALDPRAPASTL-CLRTLV-EHSGRVFRLQFDEFQIISSSHD 511
Query: 650 CSVKLWDFAKLSDEVGTE 667
++ +WDF + E
Sbjct: 512 DTILIWDFLNVPPSAQNE 529
Score = 37 (18.1 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 373 ESLPSIACYTLLNARQQV 390
+S+PS+ C + N V
Sbjct: 40 QSMPSVRCLQISNGTSSV 57
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 232 (86.7 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 73/242 (30%), Positives = 107/242 (44%)
Query: 446 DERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPV 505
D+ R L GH V + S D LS S D +RLW L + GH V
Sbjct: 49 DKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDV 108
Query: 506 WDIKFSPHGYYFASAGHDRMARLWAT---DSYHPLRLFVGHYSDVDCVQFHPNSNY--VA 560
+ FS SA DR +LW T Y GH V CV+F PN+ +
Sbjct: 109 LSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIV 168
Query: 561 TGSSDRTIRLWDCVTGSHVR-LLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXX 619
+ S D+T+++W+ ++ +R L GH V ++ S G AS G DG V +WDL+
Sbjct: 169 SASWDKTVKVWN-LSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK 227
Query: 620 XXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKN 679
V+ ALCFS + L ++ + +K+WD S V +V+L A+ +
Sbjct: 228 KLYSLEANS-VIHALCFSPNRYWLCAATEH-GIKIWDLESKSI-VEDLKVDLKAEAEKAD 284
Query: 680 SS 681
+S
Sbjct: 285 NS 286
Score = 218 (81.8 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 66/216 (30%), Positives = 98/216 (45%)
Query: 455 TLVGHEGPVRKLSFSPDRS-LLLSCSQDNTIRLWSLLLW-RCLVVYK----GHGHPVWDI 508
T+ H V ++ D + +++S S+D +I LW L + V + GH H V D+
Sbjct: 10 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDV 69
Query: 509 KFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTI 568
S G + S D RLW + R FVGH DV V F ++ + + S DRTI
Sbjct: 70 VLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTI 129
Query: 569 RLWDCVTGSHVRLLTG---HKAPVYALSFS--VCGRFLASAGGDGNVHMWDLSNXXXXXX 623
+LW+ + + G H+ V + FS + SA D V +W+LSN
Sbjct: 130 KLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRST 189
Query: 624 XXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659
V + S DG++ AS G+D V LWD A+
Sbjct: 190 LAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAE 225
Score = 203 (76.5 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 53/182 (29%), Positives = 83/182 (45%)
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYK-- 499
+R+ D +TR VGH V ++FS D ++S S+D TI+LW+ L C
Sbjct: 87 LRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTL-GECKYTISEG 145
Query: 500 GHGHPVWD--IKFSPHGYY--FASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPN 555
G GH W ++FSP+ SA D+ ++W + GH V V P+
Sbjct: 146 GEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPD 205
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
+ A+G D + LWD G + L + ++AL FS R+ A + + +WDL
Sbjct: 206 GSLCASGGKDGVVLLWDLAEGKKLYSLEANSV-IHALCFSP-NRYWLCAATEHGIKIWDL 263
Query: 616 SN 617
+
Sbjct: 264 ES 265
Score = 39 (18.8 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 633 ALCFSRDGNILASSGQDCSVKLWDFAK 659
+L +S DG+ L S D +++W +
Sbjct: 300 SLNWSADGSTLFSGYTDGVIRVWGIGR 326
>UNIPROTKB|B5X212 [details] [associations]
symbol:ciao1b "Probable cytosolic iron-sulfur protein
assembly protein ciao1-B" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT045081
ProteinModelPortal:B5X212 Uniprot:B5X212
Length = 333
Score = 233 (87.1 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 60/200 (30%), Positives = 93/200 (46%)
Query: 466 LSFSPDRSLLLSCSQDNTIRLWSLL--LWRCLVVYK-GHGHPVWDIKFSPHGYYFASAGH 522
++++P +LL SC D TIR+W W C V + GH V + +SP G Y ASA
Sbjct: 22 VAWNPKGTLLASCGGDRTIRIWGREGDSWECKTVLQDGHQRTVRKVAWSPCGNYLASASF 81
Query: 523 DRMARLWA--TDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH-- 578
D +W D + L + GH ++V CV + P+ N +AT S D+++ +W+ +
Sbjct: 82 DATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNLLATCSRDKSVWIWEVDEENEYE 141
Query: 579 -VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMW--DLSNXXXXXXXXXXXDVVRALC 635
V ++ H V + + LAS D NV ++ + + V L
Sbjct: 142 CVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLT 201
Query: 636 FSRDGNILASSGQDCSVKLW 655
F G LAS DC+VK+W
Sbjct: 202 FDPSGQRLASCSDDCTVKIW 221
Score = 185 (70.2 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 55/190 (28%), Positives = 89/190 (46%)
Query: 439 DILVRIMD-ERNAETTRTLV--GHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLL--WR 493
D +RI E ++ +T++ GH+ VRK+++SP + L S S D T +W +
Sbjct: 37 DRTIRIWGREGDSWECKTVLQDGHQRTVRKVAWSPCGNYLASASFDATTCIWKKKNDDFE 96
Query: 494 CLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDS---YHPLRLFVGHYSDVDCV 550
CL V +GH + V + ++P G A+ D+ +W D Y + + H DV V
Sbjct: 97 CLTVLEGHENEVKCVAWAPSGNLLATCSRDKSVWIWEVDEENEYECVSVVNSHTQDVKHV 156
Query: 551 QFHPNSNYVATGSSDRTIRL-------WDCVTGSHVRLLTGHKAPVYALSFSVCGRFLAS 603
+HP +A+ S D + + W+C L GH + V+ L+F G+ LAS
Sbjct: 157 VWHPTQELLASCSYDNNVCVYKEEDDDWECRA-----TLEGHTSTVWGLTFDPSGQRLAS 211
Query: 604 AGGDGNVHMW 613
D V +W
Sbjct: 212 CSDDCTVKIW 221
Score = 152 (58.6 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 45/155 (29%), Positives = 74/155 (47%)
Query: 532 DSYHPLRLFVGHYSDVDC--VQFHPNSNYVATGSSDRTIRLWDCVTGS---HVRLLTGHK 586
D+ L+ F H D C V ++P +A+ DRTIR+W S L GH+
Sbjct: 3 DTLALLQKFNAH-PDSRCWYVAWNPKGTLLASCGGDRTIRIWGREGDSWECKTVLQDGHQ 61
Query: 587 APVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXX--XXXXXXXDVVRALCFSRDGNILA 644
V +++S CG +LASA D +W N + V+ + ++ GN+LA
Sbjct: 62 RTVRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNLLA 121
Query: 645 SSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKN 679
+ +D SV +W+ + ++ VN SH+ D+K+
Sbjct: 122 TCSRDKSVWIWEVDEENEYECVSVVN-SHTQDVKH 155
Score = 141 (54.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 37/128 (28%), Positives = 62/128 (48%)
Query: 496 VVYKGHGHP---VWDIKFSPHGYYFASAGHDRMARLWAT--DSYHPLRLFV-GHYSDVDC 549
++ K + HP W + ++P G AS G DR R+W DS+ + GH V
Sbjct: 7 LLQKFNAHPDSRCWYVAWNPKGTLLASCGGDRTIRIWGREGDSWECKTVLQDGHQRTVRK 66
Query: 550 VQFHPNSNYVATGSSDRTIRLWDCVTGSH--VRLLTGHKAPVYALSFSVCGRFLASAGGD 607
V + P NY+A+ S D T +W + +L GH+ V ++++ G LA+ D
Sbjct: 67 VAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNLLATCSRD 126
Query: 608 GNVHMWDL 615
+V +W++
Sbjct: 127 KSVWIWEV 134
Score = 136 (52.9 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 34/129 (26%), Positives = 62/129 (48%)
Query: 451 ETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL---LLWRCLVVYKGHGHPVWD 507
E L GHE V+ ++++P +LL +CS+D ++ +W + + C+ V H V
Sbjct: 96 ECLTVLEGHENEVKCVAWAPSGNLLATCSRDKSVWIWEVDEENEYECVSVVNSHTQDVKH 155
Query: 508 IKFSPHGYYFASAGHDRMARLWAT--DSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSD 565
+ + P AS +D ++ D + GH S V + F P+ +A+ S D
Sbjct: 156 VVWHPTQELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTFDPSGQRLASCSDD 215
Query: 566 RTIRLW-DC 573
T+++W +C
Sbjct: 216 CTVKIWKEC 224
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 244 (91.0 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 63/227 (27%), Positives = 103/227 (45%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D ++I D+ E R L GH G V L + D ++++ S D+T+R+W + L
Sbjct: 322 DNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNAGEMLNTL 379
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPL---RLFVGHYSDVDCVQFHPN 555
H V ++F+ +G + DR +W S + R+ VGH + V+ V F +
Sbjct: 380 IHHCEAVLHLRFN-NGM-MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--D 435
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
Y+ + S DRTI++W+ T VR L GHK + L + R + S D + +WD+
Sbjct: 436 DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDI 493
Query: 616 SNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSD 662
++VR + F D + S D +K+WD D
Sbjct: 494 ECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLMAALD 538
Score = 240 (89.5 bits), Expect = 7.3e-17, P = 7.3e-17
Identities = 97/355 (27%), Positives = 150/355 (42%)
Query: 330 KKTKSDPNAPPVD--RIPLPPL-KDSEKIDKLKALREATKRVTLGPESLPSIACYTLLNA 386
K D NAPP R P + +D E I E+ R G SL I C +
Sbjct: 254 KNKPPDENAPPNSFYRALYPKIIQDIETI-------ESNWRC--GRHSLQRIHCRS--ET 302
Query: 387 RQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECD-------- 438
+ V C + +D I++ G ++ IK+W + K + + + ++ D
Sbjct: 303 SKGVYCLQY-DDQKIVS-GLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGS 360
Query: 439 -DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL------L 491
D VR+ D E TL+ H V L F+ ++++CS+D +I +W + L
Sbjct: 361 SDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITL 418
Query: 492 WRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQ 551
R LV GH V + F Y SA DR ++W T + +R GH + C+Q
Sbjct: 419 RRVLV---GHRAAVNVVDFDDK--YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQ 473
Query: 552 FHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVH 611
+ V +GSSD TIRLWD G+ +R+L GH+ V + F + + S DG +
Sbjct: 474 YR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIK 529
Query: 612 MWDLSNXXXXXXXXXXXDVVRALCFSRDGNI---------LASSGQDCSVKLWDF 657
+WDL +R L G + + SS D ++ +WDF
Sbjct: 530 VWDLMAALDPRAPAGTL-CLRTLV-EHSGRVFRLQFDEFQIVSSSHDDTILIWDF 582
>FB|FBgn0261119 [details] [associations]
symbol:Prp19 "Prp19" species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS;TAS]
[GO:0005681 "spliceosomal complex" evidence=ISS;TAS] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 EMBL:AE013599
GO:GO:0005875 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HSSP:P32523 OMA:QWQELKV FlyBase:FBgn0261119
EMBL:AF160906 RefSeq:NP_523783.1 UniGene:Dm.1432 SMR:Q7KLW9
IntAct:Q7KLW9 STRING:Q7KLW9 EnsemblMetazoa:FBtr0086723 GeneID:37123
KEGG:dme:Dmel_CG5519 UCSC:CG5519-RA CTD:321544 InParanoid:Q7KLW9
GenomeRNAi:37123 NextBio:802060 Uniprot:Q7KLW9
Length = 505
Score = 242 (90.2 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 64/228 (28%), Positives = 102/228 (44%)
Query: 444 IMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGH 503
+ ++ + L GH + K+ + P+ +++ S D IR+W + + ++ + H
Sbjct: 249 VFNKDTEQMVAILKGHTKKITKVIYHPNEDTVITGSPDMNIRIWHVPTSQTQLLLRCHEG 308
Query: 504 PVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLF--VGHYSDVDCV--QFHPNSNYV 559
PV + P G Y S D+ WA RL V ++V QFHP+
Sbjct: 309 PVTGLSLHPTGDYLLSTSSDKH---WAFSDIRTGRLLTKVIDTAEVGLTTAQFHPDGLIF 365
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXX 619
TG+ D +++WD S+V GH P+ A+SFS G +LA+A D V +WDL
Sbjct: 366 GTGTVDSQVKIWDLKEQSNVANFPGHTGPISAISFSENGYYLATAADDACVKLWDLRKLK 425
Query: 620 XXXXXXXXXDV-VRALCFSRDGNILASSGQDCSV---KLWDFAKLSDE 663
V+ LCF + G LA +G D V K W K+ ++
Sbjct: 426 NFKTIQLDDGYEVKDLCFDQSGTYLAIAGSDVRVYLCKQWQELKVFND 473
Score = 178 (67.7 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 58/221 (26%), Positives = 90/221 (40%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLV-V 497
D+ +RI ++T L HEGPV LS P LLS S D + R L V
Sbjct: 286 DMNIRIWHVPTSQTQLLLRCHEGPVTGLSLHPTGDYLLSTSSDKHWAFSDIRTGRLLTKV 345
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN 557
+ +F P G F + D ++W + F GH + + F N
Sbjct: 346 IDTAEVGLTTAQFHPDGLIFGTGTVDSQVKIWDLKEQSNVANFPGHTGPISAISFSENGY 405
Query: 558 YVATGSSDRTIRLWDCVTGSH---VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
Y+AT + D ++LWD + ++L G++ V L F G +LA AG D V++
Sbjct: 406 YLATAADDACVKLWDLRKLKNFKTIQLDDGYE--VKDLCFDQSGTYLAIAGSDVRVYL-- 461
Query: 615 LSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLW 655
+ + F + LAS+ D ++KL+
Sbjct: 462 CKQWQELKVFNDHTALATGVRFGKHAQYLASTSMDRTLKLY 502
Score = 174 (66.3 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 45/157 (28%), Positives = 68/157 (43%)
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
DI + H + G+D+ A ++ D+ + + GH + V +HPN + V TGS D
Sbjct: 229 DINSADHSKIL-TGGNDKNATVFNKDTEQMVAILKGHTKKITKVIYHPNEDTVITGSPDM 287
Query: 567 TIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXX 626
IR+W T LL H+ PV LS G +L S D + D+
Sbjct: 288 NIRIWHVPTSQTQLLLRCHEGPVTGLSLHPTGDYLLSTSSDKHWAFSDIRTGRLLTKVID 347
Query: 627 XXDV-VRALCFSRDGNILASSGQDCSVKLWDFAKLSD 662
+V + F DG I + D VK+WD + S+
Sbjct: 348 TAEVGLTTAQFHPDGLIFGTGTVDSQVKIWDLKEQSN 384
Score = 166 (63.5 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 45/195 (23%), Positives = 79/195 (40%)
Query: 469 SPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARL 528
S D S +L+ D +++ + + + KGH + + + P+ + D R+
Sbjct: 232 SADHSKILTGGNDKNATVFNKDTEQMVAILKGHTKKITKVIYHPNEDTVITGSPDMNIRI 291
Query: 529 WATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHV-RLLTGHKA 587
W + L H V + HP +Y+ + SSD+ D TG + +++ +
Sbjct: 292 WHVPTSQTQLLLRCHEGPVTGLSLHPTGDYLLSTSSDKHWAFSDIRTGRLLTKVIDTAEV 351
Query: 588 PVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSG 647
+ F G + D V +WDL + A+ FS +G LA++
Sbjct: 352 GLTTAQFHPDGLIFGTGTVDSQVKIWDLKEQSNVANFPGHTGPISAISFSENGYYLATAA 411
Query: 648 QDCSVKLWDFAKLSD 662
D VKLWD KL +
Sbjct: 412 DDACVKLWDLRKLKN 426
Score = 121 (47.7 bits), Expect = 0.00054, P = 0.00054
Identities = 38/155 (24%), Positives = 65/155 (41%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQK-----------LKAMKSSDQLQDIEMECD 438
+T A+ D I G +S +K+W L Q + A+ S+ + D
Sbjct: 353 LTTAQFHPDGLIFGTGTVDSQVKIWDLKEQSNVANFPGHTGPISAISFSENGYYLATAAD 412
Query: 439 DILVRIMDERNAETTRTLVGHEG-PVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
D V++ D R + +T+ +G V+ L F + L D +R++ W+ L V
Sbjct: 413 DACVKLWDLRKLKNFKTIQLDDGYEVKDLCFDQSGTYLAIAGSD--VRVYLCKQWQELKV 470
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATD 532
+ H ++F H Y AS DR +L+A +
Sbjct: 471 FNDHTALATGVRFGKHAQYLASTSMDRTLKLYAIE 505
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 242 (90.2 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 100/366 (27%), Positives = 154/366 (42%)
Query: 330 KKTKSDPNAPPVD--RIPLPPL-KDSEKIDKLKALREATKRVTLGPESLPSIACYTLLNA 386
K D NAPP R P + +D E I E+ R G SL I C +
Sbjct: 155 KNKPPDGNAPPNSFYRALYPKIIQDIETI-------ESNWRC--GRHSLQRIHCRS--ET 203
Query: 387 RQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECD-------- 438
+ V C + +D I++ G ++ IK+W + K + + + ++ D
Sbjct: 204 SKGVYCLQY-DDQKIVS-GLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGS 261
Query: 439 -DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL------L 491
D VR+ D E TL+ H V L F+ ++++CS+D +I +W + L
Sbjct: 262 SDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITL 319
Query: 492 WRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQ 551
R LV GH V + F Y SA DR ++W T + +R GH + C+Q
Sbjct: 320 RRVLV---GHRAAVNVVDFDDK--YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQ 374
Query: 552 FHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVH 611
+ V +GSSD TIRLWD G+ +R+L GH+ V + F + + S DG +
Sbjct: 375 YR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIK 430
Query: 612 MWDLSNXXXXXXXXXXXDVVRALCFSRDGNI---------LASSGQDCSVKLWDFAKLSD 662
+WDL +R L G + + SS D ++ +WDF L+D
Sbjct: 431 VWDLIAALDPRAPAGTL-CLRTLV-EHSGRVFRLQFDEFQIVSSSHDDTILIWDF--LND 486
Query: 663 EVGTEE 668
E
Sbjct: 487 PAAQAE 492
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 230 (86.0 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 61/197 (30%), Positives = 97/197 (49%)
Query: 426 SSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIR 485
SSD L + D VR+ D ET R+ +GH V +SFSPD ++S S+D TI+
Sbjct: 81 SSDGLFALSGSWDHS-VRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIK 139
Query: 486 LWSLLLWRCLVVYKGHGHPVWD--IKFSP--HGYYFASAGHDRMARLWATDSYHPLRLFV 541
LW+ L +C H W ++FSP + S G D++ ++W + +
Sbjct: 140 LWNTLA-QCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLE 198
Query: 542 GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLL-TGHKAPVYALSFSVCGRF 600
GH ++ V P+ + A+G D +LWD G H+ L TG + + +L FS C +
Sbjct: 199 GHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETG--STINSLCFSPCDYW 256
Query: 601 LASAGGDGNVHMWDLSN 617
L +A D + +W+L +
Sbjct: 257 LCAAT-DRFIRIWNLES 272
Score = 223 (83.6 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 57/211 (27%), Positives = 97/211 (45%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
++L GH + +S S D LS S D+++RLW L L + + GH V+ + FSP
Sbjct: 66 KSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPD 125
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSD-VDCVQFHPNSNYVATGSS--DRTIRL 570
SA D+ +LW T + + ++D + CV+F P+ N S D+ +++
Sbjct: 126 NRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKV 185
Query: 571 WDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDV 630
W+ + L GH + ++ S G AS G DG +WD+
Sbjct: 186 WNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGS-T 244
Query: 631 VRALCFSRDGNILASSGQDCSVKLWDF-AKL 660
+ +LCFS L ++ D +++W+ +KL
Sbjct: 245 INSLCFSPCDYWLCAA-TDRFIRIWNLESKL 274
Score = 216 (81.1 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 58/211 (27%), Positives = 91/211 (43%)
Query: 458 GHEGPVRKLSFSPDRSL--LLSCSQDNTIRLWSLL-------LWRCLVVYKGHGHPVWDI 508
GH V +S D L ++S S+D + +W++ + GH + D+
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDV 78
Query: 509 KFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTI 568
S G + S D RLW +R F+GH SDV V F P++ + + S D+TI
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTI 138
Query: 569 RLWDCVTGSHVRLLTG-HKAPVYALSFSVCGR--FLASAGGDGNVHMWDLSNXXXXXXXX 625
+LW+ + + H + + FS + S G D V +W+L N
Sbjct: 139 KLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLE 198
Query: 626 XXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
V+ + S DG++ AS G+D KLWD
Sbjct: 199 GHTGVLNTVTISPDGSLCASGGKDGVAKLWD 229
Score = 145 (56.1 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 42/158 (26%), Positives = 80/158 (50%)
Query: 465 KLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDR 524
+ S SP++++++SC D +++W+L +GH + + SP G AS G D
Sbjct: 164 RFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDG 223
Query: 525 MARLW-ATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTG---SHVR 580
+A+LW + H L G S ++ + F P +Y ++DR IR+W+ + S +
Sbjct: 224 VAKLWDVKEGKHLYSLETG--STINSLCFSP-CDYWLCAATDRFIRIWNLESKLIISEIY 280
Query: 581 LLTGHKAPV---YALSFSVCGRFLASAGGDGNVHMWDL 615
+ K V +L++S G+ L DGN++++++
Sbjct: 281 PVKQSKIGVPWCTSLTWSANGQLLYCGSTDGNIYVYEV 318
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 230 (86.0 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 61/197 (30%), Positives = 97/197 (49%)
Query: 426 SSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIR 485
SSD L + D VR+ D ET R+ +GH V +SFSPD ++S S+D TI+
Sbjct: 81 SSDGLFALSGSWDHS-VRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIK 139
Query: 486 LWSLLLWRCLVVYKGHGHPVWD--IKFSP--HGYYFASAGHDRMARLWATDSYHPLRLFV 541
LW+ L +C H W ++FSP + S G D++ ++W + +
Sbjct: 140 LWNTLA-QCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLE 198
Query: 542 GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLL-TGHKAPVYALSFSVCGRF 600
GH ++ V P+ + A+G D +LWD G H+ L TG + + +L FS C +
Sbjct: 199 GHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETG--STINSLCFSPCDYW 256
Query: 601 LASAGGDGNVHMWDLSN 617
L +A D + +W+L +
Sbjct: 257 LCAAT-DRFIRIWNLES 272
Score = 223 (83.6 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 57/211 (27%), Positives = 97/211 (45%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
++L GH + +S S D LS S D+++RLW L L + + GH V+ + FSP
Sbjct: 66 KSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPD 125
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSD-VDCVQFHPNSNYVATGSS--DRTIRL 570
SA D+ +LW T + + ++D + CV+F P+ N S D+ +++
Sbjct: 126 NRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKV 185
Query: 571 WDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDV 630
W+ + L GH + ++ S G AS G DG +WD+
Sbjct: 186 WNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGS-T 244
Query: 631 VRALCFSRDGNILASSGQDCSVKLWDF-AKL 660
+ +LCFS L ++ D +++W+ +KL
Sbjct: 245 INSLCFSPCDYWLCAA-TDRFIRIWNLESKL 274
Score = 216 (81.1 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 58/211 (27%), Positives = 91/211 (43%)
Query: 458 GHEGPVRKLSFSPDRSL--LLSCSQDNTIRLWSLL-------LWRCLVVYKGHGHPVWDI 508
GH V +S D L ++S S+D + +W++ + GH + D+
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDV 78
Query: 509 KFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTI 568
S G + S D RLW +R F+GH SDV V F P++ + + S D+TI
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTI 138
Query: 569 RLWDCVTGSHVRLLTG-HKAPVYALSFSVCGR--FLASAGGDGNVHMWDLSNXXXXXXXX 625
+LW+ + + H + + FS + S G D V +W+L N
Sbjct: 139 KLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLE 198
Query: 626 XXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
V+ + S DG++ AS G+D KLWD
Sbjct: 199 GHTGVLNTVTISPDGSLCASGGKDGVAKLWD 229
Score = 145 (56.1 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 42/158 (26%), Positives = 80/158 (50%)
Query: 465 KLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDR 524
+ S SP++++++SC D +++W+L +GH + + SP G AS G D
Sbjct: 164 RFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDG 223
Query: 525 MARLW-ATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTG---SHVR 580
+A+LW + H L G S ++ + F P +Y ++DR IR+W+ + S +
Sbjct: 224 VAKLWDVKEGKHLYSLETG--STINSLCFSP-CDYWLCAATDRFIRIWNLESKLIISEIY 280
Query: 581 LLTGHKAPV---YALSFSVCGRFLASAGGDGNVHMWDL 615
+ K V +L++S G+ L DGN++++++
Sbjct: 281 PVKQSKIGVPWCTSLTWSANGQLLYCGSTDGNIYVYEV 318
>MGI|MGI:2384863 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0032040
"small-subunit processome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2384863 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
HSSP:P63005 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR OMA:HHFRGSP EMBL:AK081966 EMBL:AK137554
EMBL:AK149940 EMBL:AK165125 EMBL:BC019504 IPI:IPI00124057
RefSeq:NP_663371.2 UniGene:Mm.100353 ProteinModelPortal:Q8C4J7
SMR:Q8C4J7 STRING:Q8C4J7 PhosphoSite:Q8C4J7 PaxDb:Q8C4J7
PRIDE:Q8C4J7 Ensembl:ENSMUST00000126319 GeneID:213773
KEGG:mmu:213773 UCSC:uc008axv.1 GeneTree:ENSGT00690000102183
InParanoid:Q8C4J7 NextBio:374097 Bgee:Q8C4J7 Genevestigator:Q8C4J7
Uniprot:Q8C4J7
Length = 801
Score = 245 (91.3 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 65/214 (30%), Positives = 103/214 (48%)
Query: 400 SILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGH 459
S L G + +KLW L P+ L A KS+ + +L++ A+TTR H
Sbjct: 435 SFLVTGSQDCTVKLWPL-PEALLA-KST------AADSGPVLLQ------AQTTRRC--H 478
Query: 460 EGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFAS 519
+ + L+ SP+ LL + SQD T +LW+L + L V+ GH +W+++FSP A+
Sbjct: 479 DKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFTGHRRGLWNVQFSPTDQVLAT 538
Query: 520 AGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHV 579
A D +LWA + L+ F GH + V V F + + + SD ++LW + V
Sbjct: 539 ASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGSQLLSSGSDGLLKLWTIKSNECV 598
Query: 580 RLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMW 613
R L H+ V+ L S + G D + +W
Sbjct: 599 RTLDAHEDKVWGLHCSQLDDHAITGGSDSRIILW 632
Score = 209 (78.6 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 69/242 (28%), Positives = 104/242 (42%)
Query: 458 GHEGPVRKLSFSP-DRSLLLSCSQDNTIRLWSL---LLWRCLVVYKG------------H 501
GH V + S S L++ SQD T++LW L LL + G H
Sbjct: 419 GHTHSVGTICCSRLKESFLVTGSQDCTVKLWPLPEALLAKSTAADSGPVLLQAQTTRRCH 478
Query: 502 GHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVAT 561
+ + SP+ A+ DR A+LWA L +F GH + VQF P +AT
Sbjct: 479 DKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFTGHRRGLWNVQFSPTDQVLAT 538
Query: 562 GSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXX 621
S+D TI+LW S ++ GH A V ++F G L S+G DG + +W + +
Sbjct: 539 ASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGSQLLSSGSDGLLKLWTIKSNECV 598
Query: 622 XXXXXXXDVVRAL-CFSRDGNILASSGQDCSVKLW-DF--AKLSDEVGTEEVNLSHSADI 677
D V L C D + + + G D + LW D A+ ++E E + ++
Sbjct: 599 RTLDAHEDKVWGLHCSQLDDHAI-TGGSDSRIILWKDVTEAEQAEEQAKREEQVIKQQEL 657
Query: 678 KN 679
N
Sbjct: 658 DN 659
Score = 164 (62.8 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 50/180 (27%), Positives = 80/180 (44%)
Query: 442 VRIMDERNAETTRTLVGHEGP-VRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKG 500
V I+D + R+L + + SPD +L++ S+ + W+ ++K
Sbjct: 47 VNILDVASGALLRSLEQEDQEDITSFDLSPDDEVLVTASRALLLAQWAWREGTVTRLWKA 106
Query: 501 -HGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
H PV + F A+ G D R+W ++ F G V V FHP+ +
Sbjct: 107 IHTAPVASMAFDATSTLLATGGCDGAVRVWDIVQHYGTHHFRGSPGVVHLVAFHPDPTRL 166
Query: 560 ATGSS--DRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
SS D +IR+W S + +LT H + V +LSFS G + S+G D +WDL +
Sbjct: 167 LLFSSAVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSFSEGGHTMLSSGRDKICIVWDLQS 226
Score = 152 (58.6 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 62/246 (25%), Positives = 103/246 (41%)
Query: 437 CDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPD--RSLLLSCSQDNTIRLWSLLLWRC 494
CD VR+ D T G G V ++F PD R LL S + D +IR+WSL C
Sbjct: 129 CDGA-VRVWDIVQHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSAVDTSIRVWSLQDRSC 187
Query: 495 LVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHP 554
L V H V + FS G+ S+G D++ +W SY R V + V+ P
Sbjct: 188 LAVLTAHYSAVTSLSFSEGGHTMLSSGRDKICIVWDLQSYQTTRT-VPVFESVEASVLLP 246
Query: 555 NSNYVATG--SS--------DRTI-RLWDCVTGSHVRL---LTGHKAPVYALSFSVCGRF 600
A G SS D+ I R+W+ +G V + G + + + +
Sbjct: 247 EQPAPALGVKSSGLHFLTAGDQGILRVWEAASGQCVYTQPQMPGLRQELTHCTLARAADL 306
Query: 601 LASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCF--SRDGNILASSGQDCSVKLWDFA 658
L + D N+ +++ + + V + F D +I+ +S C +K+++
Sbjct: 307 LLTVTADHNLLLYEAHSLQLQKQFAGYSEEVLDVRFLGPSDSHIVVASNSPC-LKVFELQ 365
Query: 659 KLSDEV 664
L+ ++
Sbjct: 366 TLACQI 371
Score = 129 (50.5 bits), Expect = 0.00014, P = 0.00014
Identities = 38/149 (25%), Positives = 59/149 (39%)
Query: 511 SPHGYYFASAGHDRMARLWATDSYHPLRLFVG-HYSDVDCVQFHPNSNYVATGSSDRTIR 569
SP +A + WA RL+ H + V + F S +ATG D +R
Sbjct: 75 SPDDEVLVTASRALLLAQWAWREGTVTRLWKAIHTAPVASMAFDATSTLLATGGCDGAVR 134
Query: 570 LWDCVTGSHVRLLTGHKAPVYALSF--SVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXX 627
+WD V G V+ ++F L S+ D ++ +W L +
Sbjct: 135 VWDIVQHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSAVDTSIRVWSLQDRSCLAVLTAH 194
Query: 628 XDVVRALCFSRDGNILASSGQDCSVKLWD 656
V +L FS G+ + SSG+D +WD
Sbjct: 195 YSAVTSLSFSEGGHTMLSSGRDKICIVWD 223
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 235 (87.8 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 60/204 (29%), Positives = 93/204 (45%)
Query: 456 LVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRC--LVVYKGHGHPVWDIKFSPH 513
L GHEG V F P+ S L S D I LWS+ C KGH V ++ ++
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVY-GDCDNYATLKGHSGAVMELHYNTD 121
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVD-CVQFHPNSNYVATGSSDRTIRLWD 572
G SA D+ +W +++ ++ GH S V+ C V TGS D T++LWD
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 573 CVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVR 632
+ ++ + V A++F+ + S G D ++ +WDL D V
Sbjct: 182 IRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 240
Query: 633 ALCFSRDGNILASSGQDCSVKLWD 656
L S +G+ L S+ D +V++WD
Sbjct: 241 GLSLSSEGSYLLSNAMDNTVRVWD 264
Score = 200 (75.5 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 50/167 (29%), Positives = 83/167 (49%)
Query: 495 LVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWAT----DSYHPLRLFVGHYSDVDCV 550
+++ GH V+ KF P+G ASAG DR+ LW+ D+Y L+ GH V +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLK---GHSGAVMEL 116
Query: 551 QFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGD-GN 609
++ + + + + S+D+T+ +WD TG V+ L GH + V + + G L G D G
Sbjct: 117 HYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 176
Query: 610 VHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
V +WD+ V+ A+ F+ + + S G D +K+WD
Sbjct: 177 VKLWDIRKKAAIQTFQNTYQVL-AVTFNDTSDQIISGGIDNDIKVWD 222
Score = 175 (66.7 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 48/162 (29%), Positives = 69/162 (42%)
Query: 455 TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG 514
TL GH G V +L ++ D S+L S S D T+ +W + KGH V + G
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 515 YYFASAGHDR-MARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
G D +LW ++ F Y V V F+ S+ + +G D I++WD
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDL 223
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
+ GH V LS S G +L S D V +WD+
Sbjct: 224 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 166 (63.5 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 44/128 (34%), Positives = 59/128 (46%)
Query: 536 PLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGS--HVRLLTGHKAPVYALS 593
P+ L GH +V C +FHPN + +A+ DR I LW V G + L GH V L
Sbjct: 59 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWS-VYGDCDNYATLKGHSGAVMELH 117
Query: 594 FSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCF-SRDGNILASSGQDC-S 651
++ G L SA D V +WD V + C+ +R G L +G D +
Sbjct: 118 YNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQLVCTGSDDGT 176
Query: 652 VKLWDFAK 659
VKLWD K
Sbjct: 177 VKLWDIRK 184
Score = 122 (48.0 bits), Expect = 0.00024, P = 0.00024
Identities = 54/230 (23%), Positives = 90/230 (39%)
Query: 362 REATKRVTL--GPESLPSI-ACYTLLNARQ-QVTCAEISEDVSILA-VGFSESYIKLWSL 416
++AT L GP S+ A LL+ + +V C + + S LA GF + I LWS+
Sbjct: 38 QQATPGALLQTGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGF-DRLILLWSV 96
Query: 417 VPQ--KLKAMKS-SDQLQDIEMECD---------DILVRIMDERNAETTRTLVGHEGPVR 464
+K S + ++ D D V + D E + L GH V
Sbjct: 97 YGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVN 156
Query: 465 KLSFSPDRSLLLSC--SQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGH 522
+ R L C S D T++LW + + ++ + + V + F+ S G
Sbjct: 157 SC-YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGI 214
Query: 523 DRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWD 572
D ++W GH V + +Y+ + + D T+R+WD
Sbjct: 215 DNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 264
Score = 121 (47.7 bits), Expect = 0.00031, P = 0.00031
Identities = 44/197 (22%), Positives = 83/197 (42%)
Query: 391 TCAEISEDVSILAVGFSESYIKLWSLVPQK-LKAMKSSDQLQDIEME--CDDIL------ 441
+C ++ G + +KLW + + ++ +++ Q+ + D I+
Sbjct: 157 SCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDN 216
Query: 442 -VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLW----RCLV 496
+++ D R + T T+ GH V LS S + S LLS + DNT+R+W + + RC+
Sbjct: 217 DIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVK 276
Query: 497 VYKGHGHP----VWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQF 552
+++G+ H + +SP G A+ D W + S L H
Sbjct: 277 IFQGNVHNFEKNLLRCSWSPDGSKIAAGSADSFLYPWHSLSVRSLGQIPRHRLSRQEDSV 336
Query: 553 HPNSNY-VATGSSDRTI 568
P + + SSD+ +
Sbjct: 337 KPQEGIXILSASSDKRL 353
Score = 119 (46.9 bits), Expect = 0.00052, P = 0.00052
Identities = 41/188 (21%), Positives = 79/188 (42%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
DD V++ D R +T + V ++F+ ++S DN I++W L +
Sbjct: 173 DDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT 231
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHP----LRLFVGHYSDVD----- 548
+GH V + S G Y S D R+W + P +++F G+ + +
Sbjct: 232 MRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLR 291
Query: 549 CVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVC-GRFLASAGGD 607
C + P+ + +A GS+D + W ++ + + H+ S G + SA D
Sbjct: 292 C-SWSPDGSKIAAGSADSFLYPWHSLSVRSLGQIPRHRLSRQEDSVKPQEGIXILSASSD 350
Query: 608 GNVHMWDL 615
++M ++
Sbjct: 351 KRLYMGEI 358
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 242 (90.2 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 100/366 (27%), Positives = 154/366 (42%)
Query: 330 KKTKSDPNAPPVD--RIPLPPL-KDSEKIDKLKALREATKRVTLGPESLPSIACYTLLNA 386
K D NAPP R P + +D E I E+ R G SL I C +
Sbjct: 218 KNKPPDGNAPPNSFYRALYPKIIQDIETI-------ESNWRC--GRHSLQRIHCRS--ET 266
Query: 387 RQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECD-------- 438
+ V C + +D I++ G ++ IK+W + K + + + ++ D
Sbjct: 267 SKGVYCLQY-DDQKIVS-GLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGS 324
Query: 439 -DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL------L 491
D VR+ D E TL+ H V L F+ ++++CS+D +I +W + L
Sbjct: 325 SDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITL 382
Query: 492 WRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQ 551
R LV GH V + F Y SA DR ++W T + +R GH + C+Q
Sbjct: 383 RRVLV---GHRAAVNVVDFDDK--YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQ 437
Query: 552 FHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVH 611
+ V +GSSD TIRLWD G+ +R+L GH+ V + F + + S DG +
Sbjct: 438 YR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIK 493
Query: 612 MWDLSNXXXXXXXXXXXDVVRALCFSRDGNI---------LASSGQDCSVKLWDFAKLSD 662
+WDL +R L G + + SS D ++ +WDF L+D
Sbjct: 494 VWDLVAALDPRAPAGTL-CLRTLV-EHSGRVFRLQFDEFQIVSSSHDDTILIWDF--LND 549
Query: 663 EVGTEE 668
E
Sbjct: 550 PAAQAE 555
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 243 (90.6 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 68/237 (28%), Positives = 106/237 (44%)
Query: 449 NAETTRTLVGHE-GPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWD 507
N + HE +R LSFSP L SC+ D I++W RC + GH WD
Sbjct: 197 NMNNVKIFKAHEQSKIRGLSFSPTDLKLASCADDKIIKIWDFA--RCTEDNQLVGHG-WD 253
Query: 508 IK---FSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSS 564
+K + P S G D ++W S + GH S V V+++ N N++ + SS
Sbjct: 254 VKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEWNQNGNWIVSASS 313
Query: 565 DRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGG-DGNVHMWDLSNXXXXXX 623
D+ ++++D T ++ GH V AL+ L +G DG + W + N
Sbjct: 314 DQLLKVFDIRTMKEMQTFKGHGKEVTALALHPYHEDLFVSGDKDGKILYWIVGNPEPQAE 373
Query: 624 XXXXXDV-VRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKN 679
D V +L + G+ILAS D + K W + +D + + N + S DI+N
Sbjct: 374 IHSAHDADVWSLSWHPIGHILASGSNDHTTKFWSRNRPADTMKDKYNNPNASKDIEN 430
Score = 219 (82.2 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 61/248 (24%), Positives = 112/248 (45%)
Query: 382 TLLNARQQVTCAEI-SEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQ--------- 431
T+L A + I S + + G IK W +K K+ +Q +
Sbjct: 161 TILQAHDSAVRSIIWSHNEDWMVSGDDSGNIKYWQPNMNNVKIFKAHEQSKIRGLSFSPT 220
Query: 432 DIEM-EC-DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL 489
D+++ C DD +++I D LVGH V+ +S+ P +SL++S +DN I++W
Sbjct: 221 DLKLASCADDKIIKIWDFARCTEDNQLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDA 280
Query: 490 LLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC 549
+ + GH V ++++ +G + SA D++ +++ + ++ F GH +V
Sbjct: 281 KSSQNITTLHGHKSTVSKVEWNQNGNWIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVTA 340
Query: 550 VQFHP-NSNYVATGSSDRTIRLWDCVTGS---HVRLLTGHKAPVYALSFSVCGRFLASAG 605
+ HP + + +G D I W + G+ + + H A V++LS+ G LAS
Sbjct: 341 LALHPYHEDLFVSGDKDGKILYW--IVGNPEPQAEIHSAHDADVWSLSWHPIGHILASGS 398
Query: 606 GDGNVHMW 613
D W
Sbjct: 399 NDHTTKFW 406
Score = 211 (79.3 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 54/231 (23%), Positives = 99/231 (42%)
Query: 449 NAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHP-VWD 507
N ET L H+ VR + +S + ++S I+ W + + ++K H +
Sbjct: 158 NFETI--LQAHDSAVRSIIWSHNEDWMVSGDDSGNIKYWQPNM-NNVKIFKAHEQSKIRG 214
Query: 508 IKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRT 567
+ FSP AS D++ ++W VGH DV CV +HP + + +G D
Sbjct: 215 LSFSPTDLKLASCADDKIIKIWDFARCTEDNQLVGHGWDVKCVSWHPQKSLIVSGGKDNN 274
Query: 568 IRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXX 627
I++WD + ++ L GHK+ V + ++ G ++ SA D + ++D+
Sbjct: 275 IKIWDAKSSQNITTLHGHKSTVSKVEWNQNGNWIVSASSDQLLKVFDIRTMKEMQTFKGH 334
Query: 628 XDVVRALCFSR-DGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADI 677
V AL ++ S +D + W + E++ +H AD+
Sbjct: 335 GKEVTALALHPYHEDLFVSGDKDGKILYWIVGNPEPQA---EIHSAHDADV 382
Score = 165 (63.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 42/202 (20%), Positives = 89/202 (44%)
Query: 462 PVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAG 521
P+ +S++P+ L++ S LW+ L + + + H V I +S + + S
Sbjct: 127 PINCVSWTPEGRRLVTGSSSGEFTLWNGLTFNFETILQAHDSAVRSIIWSHNEDWMVSGD 186
Query: 522 HDRMARLWATDSYHPLRLFVGH-YSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVR 580
+ W + + +++F H S + + F P +A+ + D+ I++WD +
Sbjct: 187 DSGNIKYWQPNMNN-VKIFKAHEQSKIRGLSFSPTDLKLASCADDKIIKIWDFARCTEDN 245
Query: 581 LLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDG 640
L GH V +S+ + S G D N+ +WD + V + ++++G
Sbjct: 246 QLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEWNQNG 305
Query: 641 NILASSGQDCSVKLWDFAKLSD 662
N + S+ D +K++D + +
Sbjct: 306 NWIVSASSDQLLKVFDIRTMKE 327
Score = 140 (54.3 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 34/132 (25%), Positives = 61/132 (46%)
Query: 547 VDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGG 606
++CV + P + TGSS LW+ +T + +L H + V ++ +S ++ S
Sbjct: 128 INCVSWTPEGRRLVTGSSSGEFTLWNGLTFNFETILQAHDSAVRSIIWSHNEDWMVSGDD 187
Query: 607 DGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGT 666
GN+ W + +R L FS LAS D +K+WDFA+ +++
Sbjct: 188 SGNIKYWQPNMNNVKIFKAHEQSKIRGLSFSPTDLKLASCADDKIIKIWDFARCTED--- 244
Query: 667 EEVNLSHSADIK 678
++ + H D+K
Sbjct: 245 NQL-VGHGWDVK 255
Score = 130 (50.8 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 35/165 (21%), Positives = 73/165 (44%)
Query: 503 HPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATG 562
+P+ + ++P G + LW +++ + H S V + + N +++ +G
Sbjct: 126 YPINCVSWTPEGRRLVTGSSSGEFTLWNGLTFNFETILQAHDSAVRSIIWSHNEDWMVSG 185
Query: 563 SSDRTIRLWDCVTGSHVRLLTGHK-APVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXX 621
I+ W ++V++ H+ + + LSFS LAS D + +WD +
Sbjct: 186 DDSGNIKYWQ-PNMNNVKIFKAHEQSKIRGLSFSPTDLKLASCADDKIIKIWDFARCTED 244
Query: 622 XXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGT 666
V+ + + +++ S G+D ++K+WD AK S + T
Sbjct: 245 NQLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWD-AKSSQNITT 288
>UNIPROTKB|E1C016 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AADN02024196
IPI:IPI00598430 RefSeq:XP_422637.2 ProteinModelPortal:E1C016
Ensembl:ENSGALT00000008592 GeneID:424823 KEGG:gga:424823
NextBio:20827098 Uniprot:E1C016
Length = 913
Score = 245 (91.3 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 61/250 (24%), Positives = 109/250 (43%)
Query: 407 SESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKL 466
+++ +K + + ++A K + + DD+ +R+ + E H +R +
Sbjct: 46 TQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCI 105
Query: 467 SFSPDRSLLLSCSQDNTIRLWSL-LLWRCLVVYKGHGHPVWDIKFSPH-GYYFASAGHDR 524
+ P + +L+ S D I+LW W C V++GH H V I +P FASA DR
Sbjct: 106 AVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDR 165
Query: 525 MARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN--YVATGSSDRTIRLWDCVTGSHVRLL 582
++W S P GH V+C+ ++ + Y+ +G+ DR +++WD + V+ L
Sbjct: 166 TIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
Query: 583 TGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNI 642
GH V +SF + + DG V +W S + V + R N
Sbjct: 226 EGHAQNVSCVSFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNN 285
Query: 643 LASSGQDCSV 652
+A + S+
Sbjct: 286 VALGYDEGSI 295
Score = 158 (60.7 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 46/198 (23%), Positives = 89/198 (44%)
Query: 462 PVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAG 521
PVR F ++ +++ + D IR+++ + +++ H + I P + ++
Sbjct: 59 PVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSS 118
Query: 522 HDRMARLWATDS-YHPLRLFVGHYSDVDCVQFHP-NSNYVATGSSDRTIRLWDCVTGSHV 579
D + +LW D + ++F GH V + +P ++N A+ S DRTI++W + S
Sbjct: 119 DDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPN 178
Query: 580 RLLTGHKAPVYALSFSVCGR--FLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFS 637
L GH+ V + + G +L S D V +WD N V + F
Sbjct: 179 FTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFH 238
Query: 638 RDGNILASSGQDCSVKLW 655
+ I+ + +D +V++W
Sbjct: 239 PELPIIITGSEDGTVRIW 256
Score = 141 (54.7 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 43/208 (20%), Positives = 80/208 (38%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
R L V+ + P +L+ + ++ +W+ + ++ PV KF
Sbjct: 9 RKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVAR 68
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
+ + D R++ ++ + +F H + C+ HP ++ T S D I+LWD
Sbjct: 69 KNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW 128
Query: 574 -VTGSHVRLLTGHKAPVYALSFSVC-GRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVV 631
S ++ GH V + + ASA D + +W L + V
Sbjct: 129 DKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGV 188
Query: 632 RALCFSRDGN--ILASSGQDCSVKLWDF 657
+ + G+ L S D VK+WD+
Sbjct: 189 NCIDYYSGGDKPYLISGADDRLVKIWDY 216
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 242 (90.2 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 100/366 (27%), Positives = 154/366 (42%)
Query: 330 KKTKSDPNAPPVD--RIPLPPL-KDSEKIDKLKALREATKRVTLGPESLPSIACYTLLNA 386
K D NAPP R P + +D E I E+ R G SL I C +
Sbjct: 254 KNKPPDGNAPPNSFYRALYPKIIQDIETI-------ESNWRC--GRHSLQRIHCRS--ET 302
Query: 387 RQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECD-------- 438
+ V C + +D I++ G ++ IK+W + K + + + ++ D
Sbjct: 303 SKGVYCLQY-DDQKIVS-GLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGS 360
Query: 439 -DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL------L 491
D VR+ D E TL+ H V L F+ ++++CS+D +I +W + L
Sbjct: 361 SDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITL 418
Query: 492 WRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQ 551
R LV GH V + F Y SA DR ++W T + +R GH + C+Q
Sbjct: 419 RRVLV---GHRAAVNVVDFDDK--YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQ 473
Query: 552 FHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVH 611
+ V +GSSD TIRLWD G+ +R+L GH+ V + F + + S DG +
Sbjct: 474 YR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIK 529
Query: 612 MWDLSNXXXXXXXXXXXDVVRALCFSRDGNI---------LASSGQDCSVKLWDFAKLSD 662
+WDL +R L G + + SS D ++ +WDF L+D
Sbjct: 530 VWDLVAALDPRAPAGTL-CLRTLV-EHSGRVFRLQFDEFQIVSSSHDDTILIWDF--LND 585
Query: 663 EVGTEE 668
E
Sbjct: 586 PAAQAE 591
>UNIPROTKB|G8JKX8 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:DAAA02002931 EMBL:DAAA02002930 EMBL:DAAA02002932
Ensembl:ENSBTAT00000019767 Uniprot:G8JKX8
Length = 713
Score = 243 (90.6 bits), Expect = 4.7e-17, P = 4.7e-17
Identities = 61/250 (24%), Positives = 108/250 (43%)
Query: 407 SESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKL 466
+++ +K + + ++A K + + DD+ +R+ + E H +R +
Sbjct: 17 TQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCI 76
Query: 467 SFSPDRSLLLSCSQDNTIRLWSL-LLWRCLVVYKGHGHPVWDIKFSPH-GYYFASAGHDR 524
+ P + +L+ S D I+LW W C V++GH H V I +P FASA DR
Sbjct: 77 AVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDR 136
Query: 525 MARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN--YVATGSSDRTIRLWDCVTGSHVRLL 582
++W S P GH V+C+ ++ + Y+ +G+ DR +++WD + V+ L
Sbjct: 137 TIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTL 196
Query: 583 TGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNI 642
GH V SF + + DG V +W S + V + R N
Sbjct: 197 EGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNN 256
Query: 643 LASSGQDCSV 652
+A + S+
Sbjct: 257 VALGYDEGSI 266
Score = 156 (60.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 46/198 (23%), Positives = 88/198 (44%)
Query: 462 PVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAG 521
PVR F ++ +++ + D IR+++ + +++ H + I P + ++
Sbjct: 30 PVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSS 89
Query: 522 HDRMARLWATDS-YHPLRLFVGHYSDVDCVQFHP-NSNYVATGSSDRTIRLWDCVTGSHV 579
D + +LW D + ++F GH V + +P ++N A+ S DRTI++W + S
Sbjct: 90 DDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPN 149
Query: 580 RLLTGHKAPVYALSFSVCGR--FLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFS 637
L GH+ V + + G +L S D V +WD N V F
Sbjct: 150 FTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFH 209
Query: 638 RDGNILASSGQDCSVKLW 655
+ I+ + +D +V++W
Sbjct: 210 PELPIIITGSEDGTVRIW 227
Score = 127 (49.8 bits), Expect = 0.00020, P = 0.00020
Identities = 37/158 (23%), Positives = 62/158 (39%)
Query: 504 PVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGS 563
PV KF + + D R++ ++ + +F H + C+ HP ++ T S
Sbjct: 30 PVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSS 89
Query: 564 SDRTIRLWDC-VTGSHVRLLTGHKAPVYALSFSVC-GRFLASAGGDGNVHMWDLSNXXXX 621
D I+LWD S ++ GH V + + ASA D + +W L +
Sbjct: 90 DDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPN 149
Query: 622 XXXXXXXDVVRALCFSRDGN--ILASSGQDCSVKLWDF 657
V + + G+ L S D VK+WD+
Sbjct: 150 FTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDY 187
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 241 (89.9 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 100/366 (27%), Positives = 154/366 (42%)
Query: 330 KKTKSDPNAPPVD--RIPLPPL-KDSEKIDKLKALREATKRVTLGPESLPSIACYTLLNA 386
K D NAPP R P + +D E I E+ R G SL I C +
Sbjct: 213 KNKPPDGNAPPNSFYRALYPKIIQDIETI-------ESNWRC--GRHSLQRIHCRS--ET 261
Query: 387 RQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECD-------- 438
+ V C + +D I++ G ++ IK+W + K + + + ++ D
Sbjct: 262 SKGVYCLQY-DDQKIVS-GLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGS 319
Query: 439 -DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL------L 491
D VR+ D E TL+ H V L F+ ++++CS+D +I +W + L
Sbjct: 320 SDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITL 377
Query: 492 WRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQ 551
R LV GH V + F Y SA DR ++W T + +R GH + C+Q
Sbjct: 378 RRVLV---GHRAAVNVVDFDDK--YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQ 432
Query: 552 FHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVH 611
+ V +GSSD TIRLWD G+ +R+L GH+ V + F + + S DG +
Sbjct: 433 YR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIK 488
Query: 612 MWDLSNXXXXXXXXXXXDVVRALCFSRDGNI---------LASSGQDCSVKLWDFAKLSD 662
+WDL +R L G + + SS D ++ +WDF L+D
Sbjct: 489 VWDLVAALDPRAPAGTL-CLRTLV-EHSGRVFRLQFDEFQIVSSSHDDTILIWDF--LND 544
Query: 663 EVGTEE 668
E
Sbjct: 545 PAAQAE 550
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 241 (89.9 bits), Expect = 5.6e-17, P = 5.6e-17
Identities = 100/366 (27%), Positives = 154/366 (42%)
Query: 330 KKTKSDPNAPPVD--RIPLPPL-KDSEKIDKLKALREATKRVTLGPESLPSIACYTLLNA 386
K D NAPP R P + +D E I E+ R G SL I C +
Sbjct: 254 KNKPPDGNAPPNSFYRALYPKIIQDIETI-------ESNWRC--GRHSLQRIHCRS--ET 302
Query: 387 RQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECD-------- 438
+ V C + +D I++ G ++ IK+W + K + + + ++ D
Sbjct: 303 SKGVYCLQY-DDQKIVS-GLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGS 360
Query: 439 -DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL------L 491
D VR+ D E TL+ H V L F+ ++++CS+D +I +W + L
Sbjct: 361 SDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITL 418
Query: 492 WRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQ 551
R LV GH V + F Y SA DR ++W T + +R GH + C+Q
Sbjct: 419 RRVLV---GHRAAVNVVDFDDK--YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQ 473
Query: 552 FHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVH 611
+ V +GSSD TIRLWD G+ +R+L GH+ V + F + + S DG +
Sbjct: 474 YR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIK 529
Query: 612 MWDLSNXXXXXXXXXXXDVVRALCFSRDGNI---------LASSGQDCSVKLWDFAKLSD 662
+WDL +R L G + + SS D ++ +WDF L+D
Sbjct: 530 VWDLVAALDPRAPAGTL-CLRTLV-EHSGRVFRLQFDEFQIVSSSHDDTILIWDF--LND 585
Query: 663 EVGTEE 668
E
Sbjct: 586 PAAQAE 591
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 241 (89.9 bits), Expect = 5.6e-17, P = 5.6e-17
Identities = 100/366 (27%), Positives = 154/366 (42%)
Query: 330 KKTKSDPNAPPVD--RIPLPPL-KDSEKIDKLKALREATKRVTLGPESLPSIACYTLLNA 386
K D NAPP R P + +D E I E+ R G SL I C +
Sbjct: 254 KNKPPDENAPPNSFYRALYPKIIQDIETI-------ESNWRC--GRHSLQRIHCRS--ET 302
Query: 387 RQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECD-------- 438
+ V C + +D I++ G ++ IK+W + K + + + ++ D
Sbjct: 303 SKGVYCLQY-DDQKIVS-GLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGS 360
Query: 439 -DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL------L 491
D VR+ D E TL+ H V L F+ ++++CS+D +I +W + L
Sbjct: 361 SDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITL 418
Query: 492 WRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQ 551
R LV GH V + F Y SA DR ++W T + +R GH + C+Q
Sbjct: 419 RRVLV---GHRAAVNVVDFDDK--YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQ 473
Query: 552 FHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVH 611
+ V +GSSD TIRLWD G+ +R+L GH+ V + F + + S DG +
Sbjct: 474 YR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIK 529
Query: 612 MWDLSNXXXXXXXXXXXDVVRALCFSRDGNI---------LASSGQDCSVKLWDFAKLSD 662
+WDL +R L G + + SS D ++ +WDF L+D
Sbjct: 530 VWDLMAALDPRAPAGTL-CLRTLV-EHSGRVFRLQFDEFQIVSSSHDDTILIWDF--LND 585
Query: 663 EVGTEE 668
E
Sbjct: 586 PAAHAE 591
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 246 (91.7 bits), Expect = 5.8e-17, P = 5.8e-17
Identities = 66/210 (31%), Positives = 98/210 (46%)
Query: 448 RNAETTRTLVGHEGPVRK-LSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVW 506
R + L GH+ V L FS +R ++S S DNT+++WS + +CL GH VW
Sbjct: 982 RPVRKPKVLKGHDDHVITCLQFSGNR--IVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVW 1039
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
+ S G S DR ++W DS + GH S V C+ H + V +GS D
Sbjct: 1040 SSQMS--GNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSK--VVSGSRDA 1095
Query: 567 TIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXX 626
T+R+WD GS + +L GH A V + + G+ + S D V +W
Sbjct: 1096 TLRVWDIEQGSCLHVLVGHLAAVRCVQYD--GKLIVSGAYDYMVKIWHPERQECLHTLQG 1153
Query: 627 XXDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ V +L F DG + S D S+++WD
Sbjct: 1154 HTNRVYSLQF--DGLHVVSGSLDTSIRVWD 1181
Score = 231 (86.4 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 75/283 (26%), Positives = 125/283 (44%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQK-LKAMKS------SDQLQD--IEMECDDI 440
+TC + S + I++ G ++ +K+WS V K L+ + S Q+ I D
Sbjct: 998 ITCLQFSGN-RIVS-GSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSGNIIISGSTDR 1055
Query: 441 LVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKG 500
+++ D + TL GH VR + + ++S S+D T+R+W + CL V G
Sbjct: 1056 TLKVWDMDSGACVHTLQGHTSTVRCMHLHGSK--VVSGSRDATLRVWDIEQGSCLHVLVG 1113
Query: 501 HGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVA 560
H V +++ G S +D M ++W + L GH + V +QF + +V
Sbjct: 1114 HLAAVRCVQYD--GKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQF--DGLHVV 1169
Query: 561 TGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXX 620
+GS D +IR+WD TG+ L GH++ + L S D V +WD++
Sbjct: 1170 SGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQ--NILVSGNADSTVKVWDITTGQC 1227
Query: 621 XXXXXXXXDVVRAL-CFSRDGNILASSGQDCSVKLWDFAKLSD 662
A+ C + + +S D +VKLWD K D
Sbjct: 1228 LQTLSGPNKHHSAVTCLQFNSRFVVTSSDDGTVKLWD-VKTGD 1269
Score = 165 (63.1 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 46/147 (31%), Positives = 66/147 (44%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY 498
D +V+I E TL GH V L F D ++S S D +IR+W + C
Sbjct: 1134 DYMVKIWHPERQECLHTLQGHTNRVYSLQF--DGLHVVSGSLDTSIRVWDVETGNCKHTL 1191
Query: 499 KGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVG---HYSDVDCVQFHPN 555
GH ++ + S D ++W + L+ G H+S V C+QF N
Sbjct: 1192 MGHQSLTSGMELRQN--ILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQF--N 1247
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVRLL 582
S +V T S D T++LWD TG +R L
Sbjct: 1248 SRFVVTSSDDGTVKLWDVKTGDFIRNL 1274
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 233 (87.1 bits), Expect = 6.2e-17, P = 6.2e-17
Identities = 60/204 (29%), Positives = 93/204 (45%)
Query: 456 LVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRC--LVVYKGHGHPVWDIKFSPH 513
L GHEG V F P+ S L S D I LW++ C KGH V ++ ++
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNTD 121
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVD-CVQFHPNSNYVATGSSDRTIRLWD 572
G SA D+ +W +++ ++ GH S V+ C V TGS D T++LWD
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 573 CVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVR 632
+ V+ + V A++F+ + S G D ++ +WDL D V
Sbjct: 182 IRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 240
Query: 633 ALCFSRDGNILASSGQDCSVKLWD 656
L S +G+ L S+ D +V++WD
Sbjct: 241 GLSLSSEGSYLLSNAMDNTVRVWD 264
Score = 197 (74.4 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 50/167 (29%), Positives = 82/167 (49%)
Query: 495 LVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWAT----DSYHPLRLFVGHYSDVDCV 550
+++ GH V+ KF P+G ASAG DR+ LW D+Y L+ GH V +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLK---GHSGAVMEL 116
Query: 551 QFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGD-GN 609
++ + + + + S+D+T+ +WD TG V+ L GH + V + + G L G D G
Sbjct: 117 HYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 176
Query: 610 VHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQDCSVKLWD 656
V +WD+ V+ A+ F+ + + S G D +K+WD
Sbjct: 177 VKLWDIRKKAAVQTFQNTYQVL-AVTFNDTSDQIISGGIDNDIKVWD 222
Score = 183 (69.5 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 50/196 (25%), Positives = 92/196 (46%)
Query: 391 TCAEISEDVSILAVGFSESYIKLWSLVPQK-LKAMKSSDQLQDIEME--CDDIL------ 441
+C ++ G + +KLW + + ++ +++ Q+ + D I+
Sbjct: 157 SCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDN 216
Query: 442 -VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLW----RCLV 496
+++ D R + T T+ GH V LS S + S LLS + DNT+R+W + + RC+
Sbjct: 217 DIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVK 276
Query: 497 VYKGHGHP----VWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQF 552
+++G+ H + +SP G A+ DR +W T S L GH ++ V F
Sbjct: 277 IFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAF 336
Query: 553 HPNSNYVATGSSDRTI 568
HP+ + + SSD+ +
Sbjct: 337 HPDEPIILSASSDKRL 352
Score = 176 (67.0 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 58/211 (27%), Positives = 86/211 (40%)
Query: 455 TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG 514
TL GH G V +L ++ D S+L S S D T+ +W + KGH V + G
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 515 YYFASAGHDR-MARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
G D +LW ++ F Y V V F+ S+ + +G D I++WD
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDL 223
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDL-----SNXXXXXXXXXXX 628
+ GH V LS S G +L S D V +WD+
Sbjct: 224 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVH 283
Query: 629 DVVRAL--C-FSRDGNILASSGQDCSVKLWD 656
+ + L C +S DG+ +A+ D V +WD
Sbjct: 284 NFEKNLLRCSWSPDGSKIAAGSADRFVYVWD 314
Score = 167 (63.8 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 44/128 (34%), Positives = 60/128 (46%)
Query: 536 PLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGS--HVRLLTGHKAPVYALS 593
P+ L GH +V C +FHPN + +A+ DR I LW+ V G + L GH V L
Sbjct: 59 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWN-VYGDCDNYATLKGHSGAVMELH 117
Query: 594 FSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCF-SRDGNILASSGQDC-S 651
++ G L SA D V +WD V + C+ +R G L +G D +
Sbjct: 118 YNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQLVCTGSDDGT 176
Query: 652 VKLWDFAK 659
VKLWD K
Sbjct: 177 VKLWDIRK 184
Score = 160 (61.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 44/187 (23%), Positives = 83/187 (44%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
DD V++ D R +T + V ++F+ ++S DN I++W L +
Sbjct: 173 DDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT 231
Query: 498 YKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHP----LRLFVGHYSDVD----- 548
+GH V + S G Y S D R+W + P +++F G+ + +
Sbjct: 232 MRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLR 291
Query: 549 CVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDG 608
C + P+ + +A GS+DR + +WD + + L GH + ++F + SA D
Sbjct: 292 C-SWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSDK 350
Query: 609 NVHMWDL 615
++M ++
Sbjct: 351 RLYMGEI 357
Score = 128 (50.1 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 46/221 (20%), Positives = 85/221 (38%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSC--SQDNTIRLWSLLLWRCLV 496
D V + D E + L GH V + R L C S D T++LW + +
Sbjct: 131 DKTVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDGTVKLWDIRKKAAVQ 189
Query: 497 VYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNS 556
++ + + V + F+ S G D ++W GH V +
Sbjct: 190 TFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEG 248
Query: 557 NYVATGSSDRTIRLWDCVTGSH----VRLLTGH----KAPVYALSFSVCGRFLASAGGDG 608
+Y+ + + D T+R+WD + V++ G+ + + S+S G +A+ D
Sbjct: 249 SYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADR 308
Query: 609 NVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNILASSGQD 649
V++WD ++ + + F D I+ S+ D
Sbjct: 309 FVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSD 349
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 187 (70.9 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 51/171 (29%), Positives = 84/171 (49%)
Query: 452 TTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFS 511
+T TL H V ++F P + L S S+D TI++W L KGH V + +
Sbjct: 106 STHTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYG 165
Query: 512 PH--GYYFASAGHDRMARLW-ATDSYHPLRLFVGHYSDVDCVQF-HPNSNYVATGSSDRT 567
AS D +LW + Y +R GH V V+F N N++ + S D T
Sbjct: 166 GQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGT 225
Query: 568 IRLWDCVTGSHVRLL-TGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
+R+WD TG V+++ + ++ + +S S G++L S G D + +W++S+
Sbjct: 226 LRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSS 276
Score = 172 (65.6 bits), Expect = 6.6e-17, Sum P(2) = 6.6e-17
Identities = 53/200 (26%), Positives = 91/200 (45%)
Query: 376 PSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSL----VPQKLKA-MKSSDQL 430
PS + +TL + R VTC + LA G + IK+W + + LK ++ L
Sbjct: 104 PS-STHTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGL 162
Query: 431 Q-------DIEMECD-DILVRIMD-ERNAETTRTLVGHEGPVRKLSF-SPDRSLLLSCSQ 480
+ C D+ +++ D ++ RTL GH+ V + F + + + L+S S+
Sbjct: 163 DYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASR 222
Query: 481 DNTIRLWSLLLWRCLVVYKGHGHPVW--DIKFSPHGYYFASAGHDRMARLWATDSYHPLR 538
D T+R+W + C+ V K W D+ S G + S G D+ +W S P
Sbjct: 223 DGTLRIWDVSTGFCVKVIKSATES-WIRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPKA 281
Query: 539 LFVGHYSDVDCVQFHPNSNY 558
+GH + ++C F P ++Y
Sbjct: 282 ALLGHENFIECCVFAPPASY 301
Score = 149 (57.5 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 44/161 (27%), Positives = 71/161 (44%)
Query: 501 HGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQF--HPNSNY 558
H V + F P AS D ++W + R GH V + + +
Sbjct: 113 HRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTL 172
Query: 559 VATGSSDRTIRLWDCVTG-SHVRLLTGHKAPVYALSFSVCG-RFLASAGGDGNVHMWDLS 616
+A+ SSD TI+LWD +++R L+GH V ++ F L SA DG + +WD+S
Sbjct: 173 LASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVS 232
Query: 617 NXXXXXXXXXXXDV-VRALCFSRDGNILASSGQDCSVKLWD 656
+ +R + S DG L S G+D ++ +W+
Sbjct: 233 TGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWE 273
Score = 135 (52.6 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 39/154 (25%), Positives = 68/154 (44%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDR--SLLLSCSQDNTIRLWSLLL-WRC 494
+D ++I D E RTL GH V L + + +LL SCS D TI+LW +
Sbjct: 134 EDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYAN 193
Query: 495 LVVYKGHGHPVWDIKF-SPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSD-VDCVQF 552
+ GH H V ++F + + + SA D R+W + +++ + V
Sbjct: 194 IRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSP 253
Query: 553 HPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHK 586
+ ++ +G D+ I +W+ + L GH+
Sbjct: 254 SFDGKWLVSGGRDQAITVWEVSSAEPKAALLGHE 287
Score = 114 (45.2 bits), Expect = 6.6e-17, Sum P(2) = 6.6e-17
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLS 616
+VATG+ D+TI+LW+ G ++ L GH V L F G++L S D + WDLS
Sbjct: 322 FVATGARDKTIKLWEA-RGRLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLS 379
Score = 75 (31.5 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 22/82 (26%), Positives = 35/82 (42%)
Query: 578 HVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFS 637
H+ L G K P A S C F+A+ D + +W+ + + VR L F
Sbjct: 303 HLATLAGLKKPPPATSS--C-EFVATGARDKTIKLWE-ARGRLIKTLHGHDNWVRGLVFH 358
Query: 638 RDGNILASSGQDCSVKLWDFAK 659
G L S D +++ WD ++
Sbjct: 359 PGGKYLFSVSDDKTIRCWDLSQ 380
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 187 (70.9 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 51/171 (29%), Positives = 84/171 (49%)
Query: 452 TTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFS 511
+T TL H V ++F P + L S S+D TI++W L KGH V + +
Sbjct: 106 STHTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYG 165
Query: 512 PH--GYYFASAGHDRMARLW-ATDSYHPLRLFVGHYSDVDCVQF-HPNSNYVATGSSDRT 567
AS D +LW + Y +R GH V V+F N N++ + S D T
Sbjct: 166 GQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGT 225
Query: 568 IRLWDCVTGSHVRLL-TGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSN 617
+R+WD TG V+++ + ++ + +S S G++L S G D + +W++S+
Sbjct: 226 LRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSS 276
Score = 172 (65.6 bits), Expect = 6.6e-17, Sum P(2) = 6.6e-17
Identities = 53/200 (26%), Positives = 91/200 (45%)
Query: 376 PSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSL----VPQKLKA-MKSSDQL 430
PS + +TL + R VTC + LA G + IK+W + + LK ++ L
Sbjct: 104 PS-STHTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGL 162
Query: 431 Q-------DIEMECD-DILVRIMD-ERNAETTRTLVGHEGPVRKLSF-SPDRSLLLSCSQ 480
+ C D+ +++ D ++ RTL GH+ V + F + + + L+S S+
Sbjct: 163 DYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASR 222
Query: 481 DNTIRLWSLLLWRCLVVYKGHGHPVW--DIKFSPHGYYFASAGHDRMARLWATDSYHPLR 538
D T+R+W + C+ V K W D+ S G + S G D+ +W S P
Sbjct: 223 DGTLRIWDVSTGFCVKVIKSATES-WIRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPKA 281
Query: 539 LFVGHYSDVDCVQFHPNSNY 558
+GH + ++C F P ++Y
Sbjct: 282 ALLGHENFIECCVFAPPASY 301
Score = 149 (57.5 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 44/161 (27%), Positives = 71/161 (44%)
Query: 501 HGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQF--HPNSNY 558
H V + F P AS D ++W + R GH V + + +
Sbjct: 113 HRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTL 172
Query: 559 VATGSSDRTIRLWDCVTG-SHVRLLTGHKAPVYALSFSVCG-RFLASAGGDGNVHMWDLS 616
+A+ SSD TI+LWD +++R L+GH V ++ F L SA DG + +WD+S
Sbjct: 173 LASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVS 232
Query: 617 NXXXXXXXXXXXDV-VRALCFSRDGNILASSGQDCSVKLWD 656
+ +R + S DG L S G+D ++ +W+
Sbjct: 233 TGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWE 273
Score = 135 (52.6 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 39/154 (25%), Positives = 68/154 (44%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDR--SLLLSCSQDNTIRLWSLLL-WRC 494
+D ++I D E RTL GH V L + + +LL SCS D TI+LW +
Sbjct: 134 EDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYAN 193
Query: 495 LVVYKGHGHPVWDIKF-SPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSD-VDCVQF 552
+ GH H V ++F + + + SA D R+W + +++ + V
Sbjct: 194 IRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSP 253
Query: 553 HPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHK 586
+ ++ +G D+ I +W+ + L GH+
Sbjct: 254 SFDGKWLVSGGRDQAITVWEVSSAEPKAALLGHE 287
Score = 114 (45.2 bits), Expect = 6.6e-17, Sum P(2) = 6.6e-17
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLS 616
+VATG+ D+TI+LW+ G ++ L GH V L F G++L S D + WDLS
Sbjct: 322 FVATGARDKTIKLWEA-RGRLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLS 379
Score = 75 (31.5 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 22/82 (26%), Positives = 35/82 (42%)
Query: 578 HVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFS 637
H+ L G K P A S C F+A+ D + +W+ + + VR L F
Sbjct: 303 HLATLAGLKKPPPATSS--C-EFVATGARDKTIKLWE-ARGRLIKTLHGHDNWVRGLVFH 358
Query: 638 RDGNILASSGQDCSVKLWDFAK 659
G L S D +++ WD ++
Sbjct: 359 PGGKYLFSVSDDKTIRCWDLSQ 380
>UNIPROTKB|B4DZI8 [details] [associations]
symbol:COPB2 "Coatomer protein complex, subunit beta 2
(Beta prime), isoform CRA_b" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005794
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
UniGene:Hs.681616 HGNC:HGNC:2232 ChiTaRS:COPB2 EMBL:AC024933
EMBL:AK302943 IPI:IPI00789674 SMR:B4DZI8 STRING:B4DZI8
Ensembl:ENST00000507777 Uniprot:B4DZI8
Length = 877
Score = 243 (90.6 bits), Expect = 6.8e-17, P = 6.8e-17
Identities = 61/250 (24%), Positives = 108/250 (43%)
Query: 407 SESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKL 466
+++ +K + + ++A K + + DD+ +R+ + E H +R +
Sbjct: 17 TQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCI 76
Query: 467 SFSPDRSLLLSCSQDNTIRLWSL-LLWRCLVVYKGHGHPVWDIKFSPH-GYYFASAGHDR 524
+ P + +L+ S D I+LW W C V++GH H V I +P FASA DR
Sbjct: 77 AVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDR 136
Query: 525 MARLWATDSYHPLRLFVGHYSDVDCVQFHPNSN--YVATGSSDRTIRLWDCVTGSHVRLL 582
++W S P GH V+C+ ++ + Y+ +G+ DR +++WD + V+ L
Sbjct: 137 TIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTL 196
Query: 583 TGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFSRDGNI 642
GH V SF + + DG V +W S + V + R N
Sbjct: 197 EGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNN 256
Query: 643 LASSGQDCSV 652
+A + S+
Sbjct: 257 VALGYDEGSI 266
Score = 156 (60.0 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 46/198 (23%), Positives = 88/198 (44%)
Query: 462 PVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAG 521
PVR F ++ +++ + D IR+++ + +++ H + I P + ++
Sbjct: 30 PVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSS 89
Query: 522 HDRMARLWATDS-YHPLRLFVGHYSDVDCVQFHP-NSNYVATGSSDRTIRLWDCVTGSHV 579
D + +LW D + ++F GH V + +P ++N A+ S DRTI++W + S
Sbjct: 90 DDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPN 149
Query: 580 RLLTGHKAPVYALSFSVCGR--FLASAGGDGNVHMWDLSNXXXXXXXXXXXDVVRALCFS 637
L GH+ V + + G +L S D V +WD N V F
Sbjct: 150 FTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFH 209
Query: 638 RDGNILASSGQDCSVKLW 655
+ I+ + +D +V++W
Sbjct: 210 PELPIIITGSEDGTVRIW 227
Score = 127 (49.8 bits), Expect = 0.00026, P = 0.00026
Identities = 37/158 (23%), Positives = 62/158 (39%)
Query: 504 PVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGS 563
PV KF + + D R++ ++ + +F H + C+ HP ++ T S
Sbjct: 30 PVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSS 89
Query: 564 SDRTIRLWDC-VTGSHVRLLTGHKAPVYALSFSVC-GRFLASAGGDGNVHMWDLSNXXXX 621
D I+LWD S ++ GH V + + ASA D + +W L +
Sbjct: 90 DDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPN 149
Query: 622 XXXXXXXDVVRALCFSRDGN--ILASSGQDCSVKLWDF 657
V + + G+ L S D VK+WD+
Sbjct: 150 FTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDY 187
WARNING: HSPs involving 1322 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 711 644 0.00094 120 3 11 22 0.40 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1572
No. of states in DFA: 615 (65 KB)
Total size of DFA: 362 KB (2178 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 60.06u 0.12s 60.18t Elapsed: 00:00:06
Total cpu time: 60.22u 0.13s 60.35t Elapsed: 00:00:06
Start: Thu Aug 15 11:04:27 2013 End: Thu Aug 15 11:04:33 2013
WARNINGS ISSUED: 2