RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14440
(711 letters)
>d2nxpa1 d.379.1.1 (A:195-343) TAF5 subunit of TFIID {Human (Homo
sapiens) [TaxId: 9606]}
Length = 149
Score = 182 bits (464), Expect = 6e-55
Identities = 74/149 (49%), Positives = 107/149 (71%)
Query: 126 DSEIGDLLSAYESEGDPNLYEDAYQDLKKFIENSLDVYKYELGLVLYPVLVHMYIELVYN 185
++ +LSAY +GDP +YE+ Y LK FIE SLD ++ EL + YP+ VHMY+ELVYN
Sbjct: 1 QPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYN 60
Query: 186 GHEHQATEMLHKHLMDHEPHYQEDLRKLSSVTKRDQIRTNEIAETFRSTEFIIRMSRDTL 245
HE++A K D E +YQ+DLR LSS+TK++ ++ NE FR+++F++R+SRD+
Sbjct: 61 QHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSY 120
Query: 246 SLLKRHLQEKKHTVLLNIVQEHLYFDMYE 274
LLKRHLQEK++ + NIVQEHLY D+++
Sbjct: 121 QLLKRHLQEKQNNQIWNIVQEHLYIDIFD 149
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 176 bits (445), Expect = 3e-50
Identities = 71/307 (23%), Positives = 127/307 (41%), Gaps = 31/307 (10%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLK-----------AMKSSDQ 429
Y L R VT S++ ++ IK+W + +
Sbjct: 11 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 70
Query: 430 LQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL 489
+ + D+ +++ D + E RT+ GH+ V +S P+ ++S S+D TI++W +
Sbjct: 71 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEV 130
Query: 490 LLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC 549
C+ + GH V ++ + G AS +D+ R+W + H V+C
Sbjct: 131 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVEC 190
Query: 550 VQFHPNSNYVA--------------------TGSSDRTIRLWDCVTGSHVRLLTGHKAPV 589
+ + P S+Y + +GS D+TI++WD TG + L GH V
Sbjct: 191 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 250
Query: 590 YALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQD 649
+ F G+F+ S D + +WD N + L H V +L F + + + D
Sbjct: 251 RGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 310
Query: 650 CSVKLWD 656
+VK+W+
Sbjct: 311 QTVKVWE 317
Score = 135 bits (340), Expect = 9e-36
Identities = 63/226 (27%), Positives = 99/226 (43%), Gaps = 20/226 (8%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPH 513
L GH PV ++ F P S+++S S+D TI++W KGH V DI F
Sbjct: 11 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 70
Query: 514 GYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
G AS D +LW + +R GH +V V PN +++ + S D+TI++W+
Sbjct: 71 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEV 130
Query: 574 VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRA 633
TG V+ TGH+ V + + G +AS D V +W ++ L H VV
Sbjct: 131 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVEC 190
Query: 634 LCF--------------------SRDGNILASSGQDCSVKLWDFAK 659
+ + + G L S +D ++K+WD +
Sbjct: 191 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 236
>d2j4ba1 d.379.1.1 (A:18-148) TAF5 subunit of TFIID {Encephalitozoon
cuniculi [TaxId: 6035]}
Length = 131
Score = 163 bits (413), Expect = 7e-48
Identities = 42/131 (32%), Positives = 73/131 (55%), Gaps = 1/131 (0%)
Query: 145 YEDAYQDLKKFIENSLDVYKYELGLVLYPVLVHMYIELVYNGHEHQATEMLHKHLMDHEP 204
E +Y LK +IE+SLD++K +L +LYP+ +H+Y +L+ +A E K+ DH
Sbjct: 2 METSYVSLKTWIEDSLDLFKNDLLPLLYPLFIHIYFDLIQQNKTDEAKEFFEKYRGDHYN 61
Query: 205 HYQEDLRKLSSVTKRDQIRTNEIAETFRSTEFIIRMSRDTLSLLKRHLQEKKHTVLLNIV 264
E++++ S+ I N A TF+++++ + M R LL L+E+ T +L I+
Sbjct: 62 K-SEEIKQFESIYTVQHIHENNFAYTFKNSKYHLSMGRYAFDLLINFLEERNLTYILKIL 120
Query: 265 QEHLYFDMYEG 275
+HL +Y G
Sbjct: 121 NQHLDIKVYVG 131
>d2j49a1 d.379.1.1 (A:149-282) TAF5 subunit of TFIID {Saccharomyces
cerevisiae [TaxId: 4932]}
Length = 134
Score = 151 bits (383), Expect = 1e-43
Identities = 39/133 (29%), Positives = 77/133 (57%), Gaps = 4/133 (3%)
Query: 142 PNLYEDAYQDLKKFIENSLDVYKYELGLVLYPVLVHMYIELVYNGHEHQATEMLHKHLMD 201
P Y AY LK ++++SL++YK EL ++YP+ +++++ LV + A + D
Sbjct: 1 PENYIRAYSMLKNWVDSSLEIYKPELSYIMYPIFIYLFLNLVAKNPVY-ARRFFDRFSPD 59
Query: 202 HEPHYQEDLRKLSSVTKRDQIRTNEIAETFRSTEFIIRMSRDTLSLLKRHLQEKK---HT 258
+ + ++ +L SV D I+ NE+A F+S ++ I MS+ TL+LL L E + +
Sbjct: 60 FKDFHGSEINRLFSVNSIDHIKENEVASAFQSHKYRITMSKTTLNLLLYFLNENESIGGS 119
Query: 259 VLLNIVQEHLYFD 271
++++++ +HL +
Sbjct: 120 LIISVINQHLDPN 132
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 149 bits (376), Expect = 2e-40
Identities = 68/332 (20%), Positives = 122/332 (36%), Gaps = 25/332 (7%)
Query: 350 KDSEKI-DKLKALREATKRVTLGP-----ESLPSIAC---YTLLNARQQVTCAEISEDVS 400
+++E++ ++++ R+A TL + + I TL ++ D
Sbjct: 9 QEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSR 68
Query: 401 ILAVG-----------FSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERN 449
+L ++ + + L + + + D + I + +
Sbjct: 69 LLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKT 128
Query: 450 AETTRTLVGHEG---PVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVW 506
E + D + +++ S D T LW + + + GH V
Sbjct: 129 REGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVM 188
Query: 507 DIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDR 566
+ +P F S D A+LW + F GH SD++ + F PN N ATGS D
Sbjct: 189 SLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDA 248
Query: 567 TIRL--WDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLL 624
T RL + ++SFS GR L + D N ++WD +L
Sbjct: 249 TCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVL 308
Query: 625 TGHTDVVRALCFSRDGNILASSGQDCSVKLWD 656
GH + V L + DG +A+ D +K+W+
Sbjct: 309 AGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 129 bits (324), Expect = 2e-33
Identities = 52/292 (17%), Positives = 94/292 (32%), Gaps = 54/292 (18%)
Query: 422 KAMKSSDQLQDIEMECDDILVRIMDER-------NAETTRTLVGHEGPVRKLSFSPDRSL 474
+A + +Q++D C D + + T RTL GH + + + D L
Sbjct: 10 EAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRL 69
Query: 475 LLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSP---------------------- 512
L+S SQD + +W + V ++P
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129
Query: 513 -----------------------HGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDC 549
++ D LW ++ F GH DV
Sbjct: 130 EGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMS 189
Query: 550 VQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGN 609
+ P++ +G+ D + +LWD G + TGH++ + A+ F G A+ D
Sbjct: 190 LSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDAT 249
Query: 610 V--HMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659
+ + ++ FS+ G +L + D + +WD K
Sbjct: 250 CRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK 301
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 143 bits (359), Expect = 9e-38
Identities = 77/388 (19%), Positives = 133/388 (34%), Gaps = 86/388 (22%)
Query: 345 PLPP-LKDSEKIDKLKALREAT-KRVTLGPESLPS---IACYTLLNARQQVTCAEISEDV 399
P+PP L D + AL++ T L +LP + + L+ V C + S D
Sbjct: 15 PIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDG 74
Query: 400 SILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGH 459
LA G +++ + L A S D + + E T +
Sbjct: 75 EYLATG-CNKTTQVYRVSDGSLVARLSDDSAANKDPEN-------------LNTSSSPSS 120
Query: 460 EGPVRKLSFSPDRSLLLSCS---------------------------------------- 479
+ +R + FSPD L + +
Sbjct: 121 DLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVS 180
Query: 480 --QDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDS---- 533
D T+R+W L +C + G Y A+ DR R+W +++
Sbjct: 181 GSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLV 240
Query: 534 ---YHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGS------------H 578
GH V V F + V +GS DR+++LW+ +
Sbjct: 241 ERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTC 300
Query: 579 VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALC--- 635
GHK V +++ + ++ S D V WD +G+ L +L GH + V ++
Sbjct: 301 EVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVAN 360
Query: 636 ---FSRDGNILASSGQDCSVKLWDFAKL 660
+ N+ A+ DC ++W + K+
Sbjct: 361 GSSLGPEYNVFATGSGDCKARIWKYKKI 388
Score = 52.5 bits (124), Expect = 1e-07
Identities = 13/81 (16%), Positives = 31/81 (38%), Gaps = 8/81 (9%)
Query: 585 HKAPVYALSFSVCGR---FLASAGGDGNVHMWDLSNGHLLTL----LTGHTDVVRALCFS 637
H P+ + + + +++ + + + HT VV + FS
Sbjct: 12 HSKPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFS 71
Query: 638 RDGNILASSGQDCSVKLWDFA 658
DG LA+ G + + +++ +
Sbjct: 72 NDGEYLAT-GCNKTTQVYRVS 91
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 123 bits (307), Expect = 3e-31
Identities = 52/233 (22%), Positives = 95/233 (40%), Gaps = 16/233 (6%)
Query: 435 MECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRC 494
D +R+ D + L+GH VR D ++S + D +++W C
Sbjct: 112 SGSRDATLRVWDIETGQCLHVLMGHVAAVRC--VQYDGRRVVSGAYDFMVKVWDPETETC 169
Query: 495 LVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHP 554
L +GH + V+ ++F G + S D R+W ++ + + GH S ++
Sbjct: 170 LHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD 227
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPV-YALSFSVCGRFLASAGGDGNVHMW 613
N + +G++D T+++WD TG ++ L G F+ ++ DG V +W
Sbjct: 228 --NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 285
Query: 614 DLSNGHLLTLLT-----GHTDVVRALCFSRDGNILASSGQD----CSVKLWDF 657
DL G + L G VV + S + A ++ + + DF
Sbjct: 286 DLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDF 338
Score = 118 bits (296), Expect = 8e-30
Identities = 61/250 (24%), Positives = 100/250 (40%), Gaps = 45/250 (18%)
Query: 446 DERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPV 505
++ + L GH+ V + ++S S DNT+++WS + +CL GH V
Sbjct: 2 RRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV 60
Query: 506 WDIKFSP--------------------------------------HGYYFASAGHDRMAR 527
W + H S D R
Sbjct: 61 WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLR 120
Query: 528 LWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKA 587
+W ++ L + +GH + V CVQ+ V +G+ D +++WD T + + L GH
Sbjct: 121 VWDIETGQCLHVLMGHVAAVRCVQYDGR--RVVSGAYDFMVKVWDPETETCLHTLQGHTN 178
Query: 588 PVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSG 647
VY+L F G + S D ++ +WD+ G+ + LTGH + + NIL S
Sbjct: 179 RVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGN 234
Query: 648 QDCSVKLWDF 657
D +VK+WD
Sbjct: 235 ADSTVKIWDI 244
Score = 116 bits (289), Expect = 8e-29
Identities = 46/196 (23%), Positives = 73/196 (37%), Gaps = 14/196 (7%)
Query: 431 QDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL 490
+ + D +V++ D TL GH V L F D ++S S D +IR+W +
Sbjct: 148 RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVE 205
Query: 491 LWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCV 550
C+ GH ++ + S D ++W + L+ G V
Sbjct: 206 TGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAV 263
Query: 551 QFHP-NSNYVATGSSDRTIRLWDCVTGSHVRLLT-----GHKAPVYALSFSVCGRFLASA 604
N N+V T S D T++LWD TG +R L G V+ + S A
Sbjct: 264 TCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVG 323
Query: 605 GGDGN----VHMWDLS 616
+G + + D
Sbjct: 324 SRNGTEETKLLVLDFD 339
Score = 88.3 bits (217), Expect = 2e-19
Identities = 55/209 (26%), Positives = 73/209 (34%), Gaps = 43/209 (20%)
Query: 487 WSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSD 546
W + V KGH V G S D ++W+ + LR VGH
Sbjct: 1 WRRGELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 59
Query: 547 VDCVQFHPN--------------------------------------SNYVATGSSDRTI 568
V Q N V +GS D T+
Sbjct: 60 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATL 119
Query: 569 RLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHT 628
R+WD TG + +L GH A V GR + S D V +WD L L GHT
Sbjct: 120 RVWDIETGQCLHVLMGHVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHT 177
Query: 629 DVVRALCFSRDGNILASSGQDCSVKLWDF 657
+ V +L F DG + S D S+++WD
Sbjct: 178 NRVYSLQF--DGIHVVSGSLDTSIRVWDV 204
Score = 57.5 bits (137), Expect = 2e-09
Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Query: 613 WDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFA 658
W +L GH D V C GN + S D ++K+W
Sbjct: 1 WRRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAV 45
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 106 bits (264), Expect = 6e-26
Identities = 69/303 (22%), Positives = 114/303 (37%), Gaps = 27/303 (8%)
Query: 371 GPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKS---- 426
G SL I C + + V C + D + G ++ IK+W + K + +
Sbjct: 1 GRHSLQRIHCRS--ETSKGVYC--LQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTG 56
Query: 427 ---SDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNT 483
Q + + + L + ++++CS+D +
Sbjct: 57 SVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRS 116
Query: 484 IRLWSLLLWRCL-VVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVG 542
I +W + + + GH Y SA DR ++W T + +R G
Sbjct: 117 IAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNG 176
Query: 543 HYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLA 602
H + C+Q+ V +GSSD TIRLWD G+ +R+L GH+ V + +
Sbjct: 177 HKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR--CIRFDNKRIV 232
Query: 603 SAGGDGNVHMWDLSNG---------HLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVK 653
S DG + +WDL L L H+ V L F D + SS D ++
Sbjct: 233 SGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTIL 290
Query: 654 LWD 656
+WD
Sbjct: 291 IWD 293
Score = 93.4 bits (230), Expect = 1e-21
Identities = 38/208 (18%), Positives = 70/208 (33%), Gaps = 12/208 (5%)
Query: 454 RTLVGHEGPVRK-LSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSP 512
+ + + D ++S +DNTI++W C + GH V +++
Sbjct: 6 QRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDE 65
Query: 513 HGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWD 572
S+ T + +I +WD
Sbjct: 66 RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDR----SIAVWD 121
Query: 573 CVTGSHV---RLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTD 629
+ + + R+L GH+A V + F SA GD + +W+ S + L GH
Sbjct: 122 MASPTDITLRRVLVGHRAAVNVVDFDDKYIV--SASGDRTIKVWNTSTCEFVRTLNGHKR 179
Query: 630 VVRALCFSRDGNILASSGQDCSVKLWDF 657
+ C ++ S D +++LWD
Sbjct: 180 GIA--CLQYRDRLVVSGSSDNTIRLWDI 205
Score = 47.9 bits (112), Expect = 2e-06
Identities = 10/44 (22%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 619 HLLTLLTGHTDVVRA-LCFSRDGNILASSGQDCSVKLWDFAKLS 661
H L + ++ + C D + S +D ++K+WD L
Sbjct: 3 HSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLE 46
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 107 bits (266), Expect = 1e-25
Identities = 48/292 (16%), Positives = 98/292 (33%), Gaps = 54/292 (18%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERN 449
++C ++D + +A+ + + ++ K
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKW---------------------------- 41
Query: 450 AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCL--VVYKGHGHPVWD 507
L H G V + ++PD + +++C D +W+L +V
Sbjct: 42 -VQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARC 100
Query: 508 IKFSPHGYYFASAGHDRMARLW----ATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGS 563
++++P+ FA R+ + D + + S V + +HPNS +A GS
Sbjct: 101 VRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGS 160
Query: 564 SDRTIRLWDCVTGSHVRL------------------LTGHKAPVYALSFSVCGRFLASAG 605
D R++ + V+ + FS G +A
Sbjct: 161 CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVS 220
Query: 606 GDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDF 657
D V + D + L T + A+ F + +++A +G DC L+ +
Sbjct: 221 HDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVA-AGHDCFPVLFTY 271
Score = 93.0 bits (229), Expect = 6e-21
Identities = 39/220 (17%), Positives = 75/220 (34%), Gaps = 26/220 (11%)
Query: 462 PVRKLSFSPDRSLLLSCSQDNTIRLWSLL--LWRCLVVYKGHGHPVWDIKFSPHGYYFAS 519
P+ +++ DR+ + C ++ + ++ W + K H V + ++P +
Sbjct: 9 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVT 68
Query: 520 AGHDRMARLWATDSYHPLRLFVGH--YSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGS 577
G DR A +W V CV++ PN A GS R I + +
Sbjct: 69 CGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEN 128
Query: 578 ----HVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNG--------------- 618
+ ++ V +L + LA+ D ++
Sbjct: 129 DWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKM 188
Query: 619 ---HLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLW 655
L+ + V +CFS +G+ +A D +V L
Sbjct: 189 PFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLA 228
Score = 92.6 bits (228), Expect = 9e-21
Identities = 48/323 (14%), Positives = 83/323 (25%), Gaps = 41/323 (12%)
Query: 381 YTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDD- 439
+ L QVT + + D + + ++ +W+L + K ++
Sbjct: 45 HELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWA 104
Query: 440 ----------------ILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNT 483
I + V L + P+ LL + S D
Sbjct: 105 PNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFK 164
Query: 484 IRLWSL------------------LLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRM 525
R++S + V + FS +G A HD
Sbjct: 165 CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDST 224
Query: 526 ARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH 585
L D + + V F S+ VA G D L+ + + G
Sbjct: 225 VCLADADKKMAVATLASETLPLLAVTFITESSLVAAGH-DCFPVLFTYDSAAGKLSFGGR 283
Query: 586 KAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNI--- 642
S D S L + H + V + G
Sbjct: 284 LDVPKQSSQRGLTARERFQNLDKKASSEG-SAAAGAGLDSLHKNSVSQISVLSGGKAKCS 342
Query: 643 -LASSGQDCSVKLWDFAKLSDEV 664
++G D + +WD L +
Sbjct: 343 QFCTTGMDGGMSIWDVRSLESAL 365
Score = 85.3 bits (209), Expect = 2e-18
Identities = 13/77 (16%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Query: 583 TGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGH--LLTLLTGHTDVVRALCFSRDG 640
+ P+ +++ +A + VH+++ S + L H V + ++ D
Sbjct: 4 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDS 63
Query: 641 NILASSGQDCSVKLWDF 657
N + + G D + +W
Sbjct: 64 NRIVTCGTDRNAYVWTL 80
Score = 84.1 bits (206), Expect = 6e-18
Identities = 12/84 (14%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
Query: 533 SYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRL--LTGHKAPVY 590
+YH + C ++ + +A ++ + +++ V++ L H V
Sbjct: 1 AYHSF-----LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVT 55
Query: 591 ALSFSVCGRFLASAGGDGNVHMWD 614
+ ++ + + G D N ++W
Sbjct: 56 GVDWAPDSNRIVTCGTDRNAYVWT 79
Score = 42.5 bits (98), Expect = 1e-04
Identities = 3/34 (8%), Positives = 15/34 (44%)
Query: 625 TGHTDVVRALCFSRDGNILASSGQDCSVKLWDFA 658
+ + + +++D +A + V +++ +
Sbjct: 4 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKS 37
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 104 bits (258), Expect = 8e-25
Identities = 44/333 (13%), Positives = 87/333 (26%), Gaps = 74/333 (22%)
Query: 368 VTLGPESLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSS 427
+GP LN + V IS + G + +K+W
Sbjct: 32 ALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTG-GKGCVKVWD------------ 78
Query: 428 DQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLW 487
+ ++ + + + +R PD L+ + +T+ +W
Sbjct: 79 --------------ISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIW 124
Query: 488 SLLLWRCLVVYKGHGHP------------------------------------------- 504
L + +
Sbjct: 125 DLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD 184
Query: 505 -VWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGS 563
I S G + G D R S + + + P ++A G
Sbjct: 185 GASCIDISNDGTKLWTGGLDNTVR-SWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGM 243
Query: 564 SDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTL 623
+ V L H++ V +L F+ CG++ S G D ++ W G +
Sbjct: 244 ESSNVE-VLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQ 302
Query: 624 LTGHTDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ V + S D + + D +++
Sbjct: 303 S-KESSSVLSCDISVDDKYIVTGSGDKKATVYE 334
Score = 96.0 bits (237), Expect = 4e-22
Identities = 35/251 (13%), Positives = 73/251 (29%), Gaps = 16/251 (6%)
Query: 378 IACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMEC 437
++ LN + ++ D L VG S + +W L +
Sbjct: 88 VSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYAL 147
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSF-------------SPDRSLLLSCSQDNTI 484
+ V + S D + L + DNT+
Sbjct: 148 AISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTV 207
Query: 485 RLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHY 544
R W L R + ++ + + P G + A + + H
Sbjct: 208 RSWDLREGRQ-LQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-YQLHLHE 265
Query: 545 SDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASA 604
S V ++F + + D + W G+ + + V + SV +++ +
Sbjct: 266 SCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTG 324
Query: 605 GGDGNVHMWDL 615
GD ++++
Sbjct: 325 SGDKKATVYEV 335
Score = 61.4 bits (147), Expect = 1e-10
Identities = 13/117 (11%), Positives = 32/117 (27%), Gaps = 6/117 (5%)
Query: 462 PVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAG 521
P + D + + + + + HG V + S + + G
Sbjct: 11 PAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG 70
Query: 522 HDRMARLWATDSYHPLRL-----FVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
++W + + + + P+ + G T+ +WD
Sbjct: 71 -KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDL 126
Score = 54.4 bits (129), Expect = 2e-08
Identities = 7/54 (12%), Positives = 16/54 (29%), Gaps = 1/54 (1%)
Query: 437 CDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL 490
D L+ + V S D +++ S D ++ ++
Sbjct: 284 GKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336
Score = 51.3 bits (121), Expect = 2e-07
Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 4/95 (4%)
Query: 585 HKAPVYALSFSVCGRFLA-SAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNIL 643
P Y+ + G+ D + + + L H +VV A+ S +
Sbjct: 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTL-NHGEVVCAVTISNPTRHV 66
Query: 644 ASSGQDCSVKLWDFAKLSDEVGTEEVNL-SHSADI 677
+ G+ C VK+WD + ++ +++ + I
Sbjct: 67 YTGGKGC-VKVWDISHPGNKSPVSQLDCLNRDNYI 100
Score = 30.9 bits (68), Expect = 0.47
Identities = 7/44 (15%), Positives = 14/44 (31%)
Query: 374 SLPSIACYTLLNARQQVTCAEISEDVSILAVGFSESYIKLWSLV 417
P A V +IS D + G + ++ ++
Sbjct: 293 RTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 94.2 bits (232), Expect = 2e-21
Identities = 19/243 (7%), Positives = 48/243 (19%), Gaps = 19/243 (7%)
Query: 435 MECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRC 494
++ + +++ + P + I ++ + +
Sbjct: 112 VDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKI 171
Query: 495 LVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSY-------HPLRLFVGHYSDV 547
+ F + + +
Sbjct: 172 -FAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSP 230
Query: 548 DCVQFHPNSNYVATGSSDRTIRLWDCV-------TGSHVRLLTGHKAPVYALSFSVCGRF 600
+ + P S G D + L +
Sbjct: 231 NPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAY 290
Query: 601 LASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKL 660
A G + +D+ + T + + L S D + D + + K
Sbjct: 291 YQGAPEKGVLLKYDVKTRKV----TEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKP 346
Query: 661 SDE 663
DE
Sbjct: 347 EDE 349
Score = 80.7 bits (197), Expect = 6e-17
Identities = 24/255 (9%), Positives = 63/255 (24%), Gaps = 23/255 (9%)
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQD--NTIRLWSLLLWRCLVVYK 499
I D + V +R + D + + + ++ ++
Sbjct: 26 AFIQDVSGTYVLK--VPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYD-YRTGKAEKFE 82
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYV 559
+ V+ + +G + A ++ P + + + NS ++
Sbjct: 83 ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFI 142
Query: 560 A----------TGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGN 609
A G + I ++D T + YA +F + L
Sbjct: 143 AYGFPLKHGETDGYVMQAIHVYDMEGRKIFA-ATTENSHDYAPAFDADSKNLYYLSYRSL 201
Query: 610 VHMWDLSNG-------HLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSD 662
D ++ + D + + ++
Sbjct: 202 DPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINV 261
Query: 663 EVGTEEVNLSHSADI 677
+ G + + + I
Sbjct: 262 DPGDYRMIIPLESSI 276
Score = 77.2 bits (188), Expect = 9e-16
Identities = 15/158 (9%), Positives = 34/158 (21%), Gaps = 11/158 (6%)
Query: 439 DILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLW------ 492
D +V + G P + D
Sbjct: 206 DRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGD 265
Query: 493 -RCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQ 551
R ++ + Y+ A + + + R +++ ++
Sbjct: 266 YRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKT----RKVTEVKNNLTDLR 321
Query: 552 FHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPV 589
+ V D I + R + K P+
Sbjct: 322 LSADRKTVMVRKDDGKIYTFPLEKPEDERTVETDKRPL 359
Score = 58.0 bits (138), Expect = 1e-09
Identities = 28/201 (13%), Positives = 51/201 (25%), Gaps = 14/201 (6%)
Query: 467 SFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMA 526
FSP L++ + + V+ + ++ G
Sbjct: 9 DFSPLDGDLIAFVSRGQAFIQDV--SGTYVLKVPEPLRIRYVRRGGDTKVAFIHGTREGD 66
Query: 527 RLWATD-SYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH 585
L D F + +V + N + + I D TG +
Sbjct: 67 FLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSR 126
Query: 586 KAPVYALSFSVCGRFLA----------SAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALC 635
+A + + S RF+A +H++D+ + T A
Sbjct: 127 EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPA 185
Query: 636 FSRDGNILASSGQDCSVKLWD 656
F D L D
Sbjct: 186 FDADSKNLYYLSYRSLDPSPD 206
Score = 49.5 bits (116), Expect = 7e-07
Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 6/73 (8%)
Query: 589 VYALSFSVC-GRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSG 647
+A FS G +A G + D+S ++L + +R + D + G
Sbjct: 5 KFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKV--PEPLRIRYVRRGGDTKVAFIHG 61
Query: 648 QD--CSVKLWDFA 658
+ ++D+
Sbjct: 62 TREGDFLGIYDYR 74
Score = 48.7 bits (114), Expect = 1e-06
Identities = 10/67 (14%), Positives = 21/67 (31%), Gaps = 4/67 (5%)
Query: 423 AMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDN 482
+ + + ++ D TR + + + L S DR ++ D
Sbjct: 281 VPVHGEFAAYYQGAPEKGVLLKYDV----KTRKVTEVKNNLTDLRLSADRKTVMVRKDDG 336
Query: 483 TIRLWSL 489
I + L
Sbjct: 337 KIYTFPL 343
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 93.0 bits (229), Expect = 3e-21
Identities = 39/275 (14%), Positives = 73/275 (26%), Gaps = 55/275 (20%)
Query: 437 CDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLW--SLLLWRC 494
C+ V + + T H SP S +R+W +
Sbjct: 35 CNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHIL 94
Query: 495 LVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDV------- 547
PV DI + A+ G R
Sbjct: 95 KTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDF 154
Query: 548 --------------------------------------DCVQFHPNSNYVATGSSDRTIR 569
V+++P+ + A+ D TI
Sbjct: 155 KPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIV 214
Query: 570 LWDCVTGSHVRL-------LTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLT 622
L++ V G+ + H V+ L++S G +ASA D + +W+++ +
Sbjct: 215 LYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEK 274
Query: 623 LLTGHTDV-VRALCFSRDGNILASSGQDCSVKLWD 656
+ T + + L L S + + +
Sbjct: 275 TIPVGTRIEDQQLGIIWTKQALVSISANGFINFVN 309
Score = 72.6 bits (176), Expect = 2e-14
Identities = 25/132 (18%), Positives = 51/132 (38%), Gaps = 8/132 (6%)
Query: 492 WRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDS-------YHPLRLFVGHY 544
++ + H V ++++P G FAS G D L+ V H
Sbjct: 179 FKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHS 238
Query: 545 SDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGH-KAPVYALSFSVCGRFLAS 603
V + + P+ +A+ S+D+TI++W+ T + + + L + L S
Sbjct: 239 GSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVS 298
Query: 604 AGGDGNVHMWDL 615
+G ++ +
Sbjct: 299 ISANGFINFVNP 310
Score = 64.5 bits (155), Expect = 8e-12
Identities = 12/71 (16%), Positives = 24/71 (33%), Gaps = 1/71 (1%)
Query: 549 CVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDG 608
+ P + + + ++ + + + T H S G + AS G
Sbjct: 22 VLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHG 80
Query: 609 NVHMWDLSNGH 619
NV +WD +
Sbjct: 81 NVRIWDTTQTT 91
Score = 62.6 bits (150), Expect = 3e-11
Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Query: 589 VYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQ 648
L + G + G +V+ + + + T H+ S G AS
Sbjct: 20 AVVLGNTPAGDKIQYCNGT-SVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDV 78
Query: 649 DCSVKLWDF 657
+V++WD
Sbjct: 79 HGNVRIWDT 87
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 93.8 bits (231), Expect = 3e-21
Identities = 41/225 (18%), Positives = 77/225 (34%), Gaps = 23/225 (10%)
Query: 455 TLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG 514
TL GH V + + +++ + D IR++ + + L+ GH VW +K++ G
Sbjct: 7 TLRGHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG 65
Query: 515 YYF-ASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDC 573
S + + + N Y+ TGS D T+ +W
Sbjct: 66 ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKL 125
Query: 574 VTGSHVRLLTGHKAPVYALSFSVC---------------------GRFLASAGGDGNVHM 612
S V G + S D + +
Sbjct: 126 PKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIV 185
Query: 613 WDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDF 657
WD++ L +L+GHTD + + + + S+ D ++++WD
Sbjct: 186 WDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDL 230
Score = 80.7 bits (197), Expect = 7e-17
Identities = 32/183 (17%), Positives = 66/183 (36%), Gaps = 6/183 (3%)
Query: 435 MECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRC 494
D + + D + L GH + + +R +S S D TIR+W L
Sbjct: 176 SGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGEL 235
Query: 495 LVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHP 554
+ +GH V ++ S A+A S F H++++ +
Sbjct: 236 MYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRK----FSYHHTNLSAITTFY 291
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVR-LLTGHKAPVYALSFSVCGRFLASAGGDGNVHMW 613
S+ + S+ +++ +G V + +++++F +A+ DG +
Sbjct: 292 VSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLE 350
Query: 614 DLS 616
L
Sbjct: 351 ILD 353
Score = 79.9 bits (195), Expect = 1e-16
Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 3/130 (2%)
Query: 534 YHPLRL-FVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYAL 592
+ P R GH + V NYV TG+ D+ IR++D + + L+GH V+AL
Sbjct: 1 FVPQRTTLRGHMTSVITC-LQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWAL 59
Query: 593 SFSVCGRFL-ASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCS 651
++ G + S V + T + ++ + + +D +
Sbjct: 60 KYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNT 119
Query: 652 VKLWDFAKLS 661
+ +W K S
Sbjct: 120 LHVWKLPKES 129
Score = 79.2 bits (193), Expect = 2e-16
Identities = 48/258 (18%), Positives = 95/258 (36%), Gaps = 18/258 (6%)
Query: 403 AVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGP 462
G ++ + +W L + D E D LV E N L GH
Sbjct: 112 VTGSRDNTLHVWKL--------PKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMAS 163
Query: 463 VRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGH 522
VR +S + +++S S DNT+ +W + +CL + GH ++ + SA
Sbjct: 164 VRTVSGHGN--IVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASM 221
Query: 523 DRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLL 582
D R+W ++ + GH + V ++ A + +
Sbjct: 222 DTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSY-- 279
Query: 583 TGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLL-TLLTGHTDVVRALCFSRDGN 641
H + A++ + +G + ++++L +G L+ + D + ++ F
Sbjct: 280 --HHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKT- 336
Query: 642 ILASSGQDCSVKLW--DF 657
++A+ +D L DF
Sbjct: 337 LVAAVEKDGQSFLEILDF 354
Score = 64.9 bits (156), Expect = 8e-12
Identities = 56/283 (19%), Positives = 96/283 (33%), Gaps = 64/283 (22%)
Query: 437 CDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLV 496
DD ++R+ D N + L GH+G V L ++ +L+S S D T+R+W + C
Sbjct: 30 ADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG-GILVSGSTDRTVRVWDIKKGCCTH 88
Query: 497 VYKGHGHPVWDIKFSPHGY--YFASAGHDRMARLWATDS--------------------- 533
V++GH V + + Y + D +W
Sbjct: 89 VFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPE 148
Query: 534 YHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALS 593
+P + V + N V +GS D T+ +WD + +L+GH +Y+
Sbjct: 149 ENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTI 208
Query: 594 FSVCGRFLASAGGDGNVHMWDLSNG----------------------------------- 618
+ + SA D + +WDL NG
Sbjct: 209 YDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGW 268
Query: 619 ----HLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDF 657
+ HT++ F NIL SG + +++
Sbjct: 269 DANDYSRKFSYHHTNLSAITTFYVSDNILV-SGSENQFNIYNL 310
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 92.6 bits (228), Expect = 1e-20
Identities = 35/222 (15%), Positives = 64/222 (28%), Gaps = 30/222 (13%)
Query: 452 TTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWS------LLLWRCLVVYKGHGHPV 505
T + + + S L+ + + T+++ L + + + +
Sbjct: 176 TVESPMTPSQFATSVDISER-GLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSI 234
Query: 506 WDIKFSPHGYYFASAGHDRMARLW----------------ATDSYHPLRLFVGHYSDVDC 549
+KFSP G A A T S H S V
Sbjct: 235 RSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMS 294
Query: 550 VQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVY----ALSFSVCGRFLASAG 605
+ F+ + + + D +R WD T + L H + L+ G LA G
Sbjct: 295 LSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPG 354
Query: 606 GDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSG 647
+ L G + + + +C R +G
Sbjct: 355 VFD---VKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 393
Score = 92.6 bits (228), Expect = 1e-20
Identities = 46/328 (14%), Positives = 92/328 (28%), Gaps = 67/328 (20%)
Query: 396 SEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRT 455
+ ++ ++A + + + +D +++ E+
Sbjct: 76 AFELCLVATTSFSGDLLFYRI-------------------TREDETKKVIFEKLDLLDSD 116
Query: 456 LVGHEGPVRKLSFSPDR---SLLLSCSQDNTIRLWSLL------------------LWRC 494
+ H K S DR L++ T +W L
Sbjct: 117 MKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGT 176
Query: 495 LVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWA------TDSYHPLRLFVGHYSDVD 548
+ + S G A+ ++ ++ ++ + + + +
Sbjct: 177 VESPMTPSQFATSVDISERGL-IATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIR 235
Query: 549 CVQFHPNSNYVATGSSDRTI---RLWDC-------------VTGSHVRLLTGHKAPVYAL 592
V+F P + +A + L++ + H + V +L
Sbjct: 236 SVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSL 295
Query: 593 SFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVR----ALCFSRDGNILASSGQ 648
SF+ G L SAG DG + WD+ +T L H D + L G+ LA G
Sbjct: 296 SFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGV 355
Query: 649 DCSVKLWDFAKLSDEVGTEEVNLSHSAD 676
L + E D
Sbjct: 356 FDVKFLKKGWRSGMGADLNESLCCVCLD 383
Score = 88.0 bits (216), Expect = 3e-19
Identities = 25/240 (10%), Positives = 60/240 (25%), Gaps = 67/240 (27%)
Query: 452 TTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFS 511
T H+ + +S +SCS D +++W L
Sbjct: 6 TANAGKAHDADIFSVSACNS--FTVSCSGDGYLKVWDNKLLDNE---------------- 47
Query: 512 PHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQF-HPNSNYVATGSSDRTIRL 570
+ S+ + + H + ++ VAT S +
Sbjct: 48 --------------NPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLF 93
Query: 571 WDCVTGSHVRLLTG----------HKAPVYALSFSVCG-----RFLASAGGDGNVHMWDL 615
+ + + K +AL + L + G ++W
Sbjct: 94 YRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKF 153
Query: 616 SNG------------------HLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDF 657
+ + ++ S G ++A+ + +V++ +
Sbjct: 154 HPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISEL 212
Score = 83.8 bits (205), Expect = 9e-18
Identities = 26/197 (13%), Positives = 64/197 (32%), Gaps = 35/197 (17%)
Query: 542 GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGS------HVRLLTGHKAPVYALSFS 595
H +D+ V + + + S D +++WD HK+ ++ +
Sbjct: 12 AHDADIFSVSACNS--FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVL 69
Query: 596 VC-------GRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDV----------VRALCFSR 638
+A+ G++ + ++ + AL +
Sbjct: 70 QAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGA 129
Query: 639 DGN-----ILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADIKNSSLAYLVRSYKTKA 693
+ L ++ + +W F +DE + +N S + +++ + V S T +
Sbjct: 130 SNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGT-----VESPMTPS 184
Query: 694 SPLLHLIFSRRNILLRG 710
+ S R ++ G
Sbjct: 185 QFATSVDISERGLIATG 201
Score = 80.3 bits (196), Expect = 1e-16
Identities = 36/316 (11%), Positives = 82/316 (25%), Gaps = 78/316 (24%)
Query: 438 DDILVRIMD------ERNAETTRTLVGHEGPVRKLSF-------SPDRSLLLSCSQDNTI 484
D +++ D E + + + H+ + + + + L+ + S +
Sbjct: 32 GDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDL 91
Query: 485 RLWSLLLWRCLVVYKG----------HGHPVWDIKFSPHGY-----YFASAGHDRMARLW 529
+ + H W +K+ + +W
Sbjct: 92 LFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIW 151
Query: 530 ATDSYHP------------------LRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLW 571
+ + + V +ATG ++ T+++
Sbjct: 152 KFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISER-GLIATGFNNGTVQIS 210
Query: 572 D------CVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMW------------ 613
+ + + + ++ FS G LA A +
Sbjct: 211 ELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIG 270
Query: 614 ----DLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKL--------- 660
+ H+ V +L F+ G L S+G D ++ WD
Sbjct: 271 SLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMH 330
Query: 661 SDEVGTEEVNLSHSAD 676
D++ EE L+
Sbjct: 331 CDDIEIEEDILAVDEH 346
Score = 66.4 bits (160), Expect = 4e-12
Identities = 29/219 (13%), Positives = 54/219 (24%), Gaps = 53/219 (24%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMK------------------------ 425
T +ISE ++A GF+ +++ L +
Sbjct: 187 ATSVDISER-GLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSL 245
Query: 426 ----SSDQLQDIEMECDD-----ILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLL 476
+ I + +++ + H V LSF+ L
Sbjct: 246 LAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLC 305
Query: 477 SCSQDNTIRLWSLLLWRCLVVYKGHGHPV----WDIKFSPHGYYFASAGHDRMARLWATD 532
S D +R W + + H + + HG A G + L
Sbjct: 306 SAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLK--- 362
Query: 533 SYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLW 571
+ + DR+IR +
Sbjct: 363 ------------KGWRSGMGADLNESLCCVCLDRSIRWF 389
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 85.4 bits (210), Expect = 1e-18
Identities = 31/245 (12%), Positives = 61/245 (24%), Gaps = 29/245 (11%)
Query: 443 RIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQ----------DNTIRLWSLLLW 492
+ D + + G GP + +PDR + + + + +
Sbjct: 1 YVYDADAKKLLGQIDGGFGPG--FAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTL 58
Query: 493 RCLVVYKGHGHPVWDIK---FSP---HGYYFASAGHDRMARLWATDSYHPLRLFVGHYSD 546
+ + G A A + D+ +
Sbjct: 59 DHAGEIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKM--LSEIDT 116
Query: 547 VDCVQFHPNSN--YVATGSSDRTIRLWDCVTGSHVR--LLTGHKAPVYALSFSVCGRF-- 600
CV +P + + A S + + + G + + +F R+
Sbjct: 117 AACVLAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKG 176
Query: 601 -LASAGGDGNVHMWDLSNGHLLTL--LTGHTDVVRALCFSRDGNILASSGQDCSVKLWDF 657
GNV D S + TD RA + G + +
Sbjct: 177 DYLFTTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEGWRPGGMQQTAVQAKQNRYYVLM 236
Query: 658 AKLSD 662
K +D
Sbjct: 237 HKGTD 241
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 83.0 bits (203), Expect = 7e-18
Identities = 35/287 (12%), Positives = 74/287 (25%), Gaps = 68/287 (23%)
Query: 438 DDILVRIMDERNAET--TRTLVGHEG-PVRKLSFSPDRS--LLLSCSQDNTIRLWSL--- 489
VR +D+ +++ GH V + FSP + L S + + +W
Sbjct: 38 KSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFD 97
Query: 490 -----LLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGH--DRMARLWATDSYHPLRLFVG 542
+ ++ P+ DI + G G D + DS + L G
Sbjct: 98 KESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSG 157
Query: 543 HYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLT----GHKAPVYALSFSVC- 597
H ++ + + D ++ + V + FS
Sbjct: 158 HSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDS 217
Query: 598 ---------------------------------------------GRFLASAGGDGNVHM 612
+ A+ G D + +
Sbjct: 218 GEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRV 277
Query: 613 WDLSNGHLLTLLTGHTDVVRAL---CFSRDGNILASSGQDCSVKLWD 656
WD++ + T + + + S D ++ ++
Sbjct: 278 WDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYE 324
Score = 73.0 bits (177), Expect = 2e-14
Identities = 25/145 (17%), Positives = 42/145 (28%), Gaps = 7/145 (4%)
Query: 478 CSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLW----ATDS 533
+ + G V D++FSP F + +
Sbjct: 181 DGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEF 240
Query: 534 YHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALS 593
+ +S AT +D TIR+WD T V+ T K +
Sbjct: 241 LKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQ 300
Query: 594 FSVC---GRFLASAGGDGNVHMWDL 615
V + S DG ++ ++L
Sbjct: 301 VGVVATGNGRIISLSLDGTLNFYEL 325
Score = 65.7 bits (158), Expect = 4e-12
Identities = 34/265 (12%), Positives = 63/265 (23%), Gaps = 66/265 (24%)
Query: 461 GPVRKLSFSPDRSLLLSCSQDNT-IRLWSL--LLWRCLVVYKGHGH-PVWDIKFSPH--G 514
LS+ P + + + +R +V + GHG V +KFSP
Sbjct: 18 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGS 77
Query: 515 YYFASAGHDRMARLWATDS--------YHPLRLFVGHYSDVDCVQFHPNSNYVA--TGSS 564
Y S +W + F + + + +
Sbjct: 78 QYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGR 137
Query: 565 DRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHL---- 620
D +G+ + ++GH + A + GD ++
Sbjct: 138 DNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSAS 197
Query: 621 LTLLTGHTDVVRALCFS------------------------------------------- 637
VR + FS
Sbjct: 198 DRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFA 257
Query: 638 ---RDGNILASSGQDCSVKLWDFAK 659
D A+ G D ++++WD
Sbjct: 258 LSWLDSQKFATVGADATIRVWDVTT 282
Score = 51.8 bits (122), Expect = 1e-07
Identities = 17/79 (21%), Positives = 28/79 (35%), Gaps = 6/79 (7%)
Query: 585 HKAPVYALSFSVCGRFLASAGGDGN-VHMWDLSNG--HLLTLLTGH-TDVVRALCFS--R 638
+ LS+ +A G V D + + TGH + VV + FS +
Sbjct: 16 QRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIK 75
Query: 639 DGNILASSGQDCSVKLWDF 657
L S + V +W +
Sbjct: 76 GSQYLCSGDESGKVIVWGW 94
Score = 41.8 bits (96), Expect = 2e-04
Identities = 8/56 (14%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Query: 437 CDDILVRIMDERNAETTRTLVGHEGPVRKLSFS---PDRSLLLSCSQDNTIRLWSL 489
D +R+ D ++ + + + ++S S D T+ + L
Sbjct: 270 GADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 82.6 bits (202), Expect = 1e-17
Identities = 25/215 (11%), Positives = 52/215 (24%), Gaps = 15/215 (6%)
Query: 458 GHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRC---LVVYKGHGHPVWDIKFSPH- 513
+ + + P +SLLL S D ++ ++ + L+ + HP+ F +
Sbjct: 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNT 68
Query: 514 GYYFASAGHDRMARLWATDS-YHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWD 572
L + C + + S D I + D
Sbjct: 69 DLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVID 128
Query: 573 CVTGSHVRLLTGHKAPV------YALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTG 626
+ + + L + V + L
Sbjct: 129 PRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIE 188
Query: 627 HTD----VVRALCFSRDGNILASSGQDCSVKLWDF 657
+ + ++ A S D V + F
Sbjct: 189 ESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFF 223
Score = 81.4 bits (199), Expect = 4e-17
Identities = 33/349 (9%), Positives = 77/349 (22%), Gaps = 98/349 (28%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERN 449
++ +I S+L + + + ++ Q
Sbjct: 14 ISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNV-------------------------- 47
Query: 450 AETTRTLVGHEGPVRKLSFSPDRSLLLSCS------------------------------ 479
+ ++ P+ +F + L +
Sbjct: 48 --DLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGIC 105
Query: 480 --------------QDNTIRLWSLLLWRCLVVYKGHGHPVWD------IKFSPHGYYFAS 519
D I + + V+ + + +
Sbjct: 106 RICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIV 165
Query: 520 AGHDRMARLWATDSYHPLRLFVGHYSD----VDCVQFHPNSNYVATGSSDRTIRLWDCVT 575
++ + + + D A S D + +
Sbjct: 166 GMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDD 225
Query: 576 GSHVRLL---------------TGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHL 620
T PV ++ FS +FL +AG DG + W+L
Sbjct: 226 QGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKK 285
Query: 621 LTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEV 669
+ + + + NIL + D + K + E+ +
Sbjct: 286 IKNFAKFNEDS-VVKIACSDNILCLATSDDTFKTNAAIDQTIELNASSI 333
Score = 77.6 bits (189), Expect = 6e-16
Identities = 18/176 (10%), Positives = 43/176 (24%), Gaps = 24/176 (13%)
Query: 478 CSQDNTIRLWSLLLWRCLVVYKGHG----HPVWDIKFSPHGYYFASAGHDRMARLWATDS 533
++ ++ + L L +A + D + D
Sbjct: 166 GMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDD 225
Query: 534 ---------------YHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH 578
+ V+ ++F P ++ T SD I W+ T
Sbjct: 226 QGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKK 285
Query: 579 VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRAL 634
++ + + L A D +N + + + + +
Sbjct: 286 IKNFAKFN-EDSVVKIACSDNILCLATSDD----TFKTNAAIDQTIELNASSIYII 336
Score = 67.6 bits (163), Expect = 1e-12
Identities = 9/86 (10%), Positives = 27/86 (31%), Gaps = 3/86 (3%)
Query: 537 LRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLL---TGHKAPVYALS 593
+++ + ++ P+ + + S D ++ ++ + L +K P+ +
Sbjct: 4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCN 63
Query: 594 FSVCGRFLASAGGDGNVHMWDLSNGH 619
F G + G
Sbjct: 64 FIDNTDLQIYVGTVQGEILKVDLIGS 89
Score = 63.3 bits (152), Expect = 3e-11
Identities = 8/75 (10%), Positives = 21/75 (28%), Gaps = 3/75 (4%)
Query: 579 VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHL---LTLLTGHTDVVRALC 635
V++ K + + L DG++ ++ L + +
Sbjct: 4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCN 63
Query: 636 FSRDGNILASSGQDC 650
F + ++ G
Sbjct: 64 FIDNTDLQIYVGTVQ 78
Score = 61.0 bits (146), Expect = 2e-10
Identities = 13/90 (14%), Positives = 27/90 (30%), Gaps = 4/90 (4%)
Query: 493 RCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSY---HPLRLFVGHYSDVDC 549
+ + + + + DIK P D ++ D L + + + C
Sbjct: 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLC 61
Query: 550 VQFHPNS-NYVATGSSDRTIRLWDCVTGSH 578
F N+ + G+ I D +
Sbjct: 62 CNFIDNTDLQIYVGTVQGEILKVDLIGSPS 91
Score = 57.9 bits (138), Expect = 1e-09
Identities = 6/58 (10%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Query: 620 LLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVNLSHSADI 677
++ + D + + ++L + D S+ ++ F + +L + +
Sbjct: 3 IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDI-QAKNVDLLQSLRYKHPL 59
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 82.5 bits (202), Expect = 1e-17
Identities = 32/257 (12%), Positives = 67/257 (26%), Gaps = 28/257 (10%)
Query: 414 WSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGP--VRKLSFSPD 471
S +++ A + Q + + + + + + P V + + D
Sbjct: 96 ISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADD 155
Query: 472 RSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWAT 531
SL ++ + + + L + +P W
Sbjct: 156 GSLYVAGPDIYKMDVKTGKYTVALP----LRNWNRKGYSAPDVL-----------YFWPH 200
Query: 532 DSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGS-HVRLLTGHKAPVY 590
S + +F + AT D TG H + +
Sbjct: 201 QSPRHEFSMLYT-----IARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYF 255
Query: 591 ALSFSVCGRFLASAGGDGNVHMWDLSNGHLL-TLLTGHTDVVRALCFSRDGNILASSGQD 649
S G + +DL L+ HT + F + G+ L G
Sbjct: 256 TGLRSPKDPNQIY-GVLNRLAKYDLKQRKLIKAANLDHT--YYCVAFDKKGDKLYLGGTF 312
Query: 650 CSVKLWDFAKLSDEVGT 666
+ +++ L +V
Sbjct: 313 NDLAVFNPDTLE-KVKN 328
Score = 67.5 bits (163), Expect = 1e-12
Identities = 16/212 (7%), Positives = 42/212 (19%), Gaps = 26/212 (12%)
Query: 466 LSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYK-GHGHPVWDIKFSPHG-YYFASAGHD 523
+ ++ + N + + + +P + H
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY 61
Query: 524 RMARLWATDSYHPLRLF------VGHYSDVDCVQFHPNSNYVATGSSDRT---------- 567
D+ + P+ V +
Sbjct: 62 GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKP 121
Query: 568 --IRLWDCVTGSHVRLLTGHKAP--VYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTL 623
+ ++ G + + P VY + + G + +++ D+ G
Sbjct: 122 PRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVA---GPDIYKMDVKTGKYTVA 178
Query: 624 LTGHTDVVRALCFSRDGNILASSGQDCSVKLW 655
L R + D
Sbjct: 179 LPLRNW-NRKGYSAPDVLYFWPHQSPRHEFSM 209
Score = 67.5 bits (163), Expect = 1e-12
Identities = 17/206 (8%), Positives = 50/206 (24%), Gaps = 12/206 (5%)
Query: 385 NARQQVTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRI 444
+QV ++D S+ G + + + +++ ++ +
Sbjct: 142 PMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQ 201
Query: 445 MDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV-YKGHGH 503
F D+ + L + +
Sbjct: 202 SPRHE---------FSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTE 252
Query: 504 PVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGS 563
+ SP +R+ + ++ CV F + + G
Sbjct: 253 LYFTGLRSPKDPNQIYGVLNRL-AKYDLKQRKLIK-AANLDHTYYCVAFDKKGDKLYLGG 310
Query: 564 SDRTIRLWDCVTGSHVRLLTGHKAPV 589
+ + +++ T V+ + +
Sbjct: 311 TFNDLAVFNPDTLEKVKNIKLPGGDM 336
Score = 61.3 bits (147), Expect = 1e-10
Identities = 10/123 (8%), Positives = 28/123 (22%), Gaps = 8/123 (6%)
Query: 550 VQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLT-GHKAPVYALSFSVCGRFL-ASAGGD 607
Y+ + + + D + + + K + R
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY 61
Query: 608 GNVHMWDLSNGHLLTLLT------GHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLS 661
G+++ DL + + S DG + ++ +
Sbjct: 62 GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKP 121
Query: 662 DEV 664
+
Sbjct: 122 PRL 124
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 81.4 bits (199), Expect = 3e-17
Identities = 22/204 (10%), Positives = 51/204 (25%), Gaps = 27/204 (13%)
Query: 459 HEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFA 518
+ L+++ D S L +D + LV K + P
Sbjct: 133 APRQITMLAWARDGSKLYGLGRDLHVMDPE---AGTLVEDKPIQSWEAETYAQPDVLAVW 189
Query: 519 SAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGS- 577
+ + + + + D TG
Sbjct: 190 NQHESS------------------GVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM 231
Query: 578 HVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLL-TLLTGHTDVVRALCF 636
+R + ++ + + + +DL + + H+ ++
Sbjct: 232 AMREVRIMDVFYFSTAVNPAKTRAFG--AYNVLESFDLEKNASIKRVPLPHS--YYSVNV 287
Query: 637 SRDGNILASSGQDCSVKLWDFAKL 660
S DG+ + G + +D L
Sbjct: 288 STDGSTVWLGGALGDLAAYDAETL 311
Score = 64.1 bits (154), Expect = 1e-11
Identities = 11/138 (7%), Positives = 33/138 (23%), Gaps = 2/138 (1%)
Query: 459 HEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFA 518
+ D + + L + + V+ + +
Sbjct: 196 GVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMR-EVRIMDVFYFSTAVNPAKTR 254
Query: 519 SAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH 578
+ G + + + ++ V V + + V G + + +D T
Sbjct: 255 AFGAYNVLESFDLEKNASIK-RVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEK 313
Query: 579 VRLLTGHKAPVYALSFSV 596
+ +L+
Sbjct: 314 KGQVDLPGNASMSLASVR 331
Score = 61.7 bits (148), Expect = 7e-11
Identities = 18/260 (6%), Positives = 51/260 (19%), Gaps = 47/260 (18%)
Query: 442 VRIMDERNAETTRTL--VGHEGPVRKLSFSPD-RSLLLSCSQDNTIRLWSLLLWRCLVVY 498
+ ++D + + +P R + ++ ++ L+ L
Sbjct: 13 LVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRI 72
Query: 499 KGH-----GHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHP-----------LRLFVG 542
++ SP G A L + R
Sbjct: 73 DLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE 132
Query: 543 HYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAP-------------- 588
+ + + + + + D + + G+ V
Sbjct: 133 APRQITMLAWARDGSKLYGLGRDLHVMDPE--AGTLVEDKPIQSWEAETYAQPDVLAVWN 190
Query: 589 ---------VYALSFSVCGRFLASAGGDGNVHMWDLSNGHLL-TLLTGHTDVVRALCFSR 638
+ + DL G + + + +
Sbjct: 191 QHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNP 250
Query: 639 DGNILASSGQDCSVKLWDFA 658
++ +D
Sbjct: 251 AKTRAFG--AYNVLESFDLE 268
Score = 58.3 bits (139), Expect = 1e-09
Identities = 19/109 (17%), Positives = 36/109 (33%), Gaps = 8/109 (7%)
Query: 557 NYVATGSSDRTIRLWDCVTGSHVRLLTGHKAP--VYALSFSVCGRFL-ASAGGDGNVHMW 613
+Y+ + + + D + +++T A + GR A+ ++
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKI 61
Query: 614 DLSNGHLLTLLTGHT-----DVVRALCFSRDGNILASSGQDCSVKLWDF 657
DL G L + T + S DG LA ++L F
Sbjct: 62 DLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHF 110
Score = 58.3 bits (139), Expect = 1e-09
Identities = 23/205 (11%), Positives = 48/205 (23%), Gaps = 22/205 (10%)
Query: 472 RSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHP--VWDIKFSPHG-YYFASAGHDRMARL 528
R +L+ ++ + + + V +P G +A+
Sbjct: 1 RDYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVK 60
Query: 529 WATDSYHPLRLFVGHYSDVD-----CVQFHPNSNYVATGSSDRTIRLWDCVTGSH----- 578
+ L + P+ +A S + L
Sbjct: 61 IDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALY 120
Query: 579 ------VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVR 632
R + L+++ G L G D +V + G L+
Sbjct: 121 DAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPE--AGTLVEDKPIQ-SWEA 177
Query: 633 ALCFSRDGNILASSGQDCSVKLWDF 657
D + + + V F
Sbjct: 178 ETYAQPDVLAVWNQHESSGVMATPF 202
Score = 47.9 bits (112), Expect = 2e-06
Identities = 7/126 (5%), Positives = 28/126 (22%), Gaps = 5/126 (3%)
Query: 391 TCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERNA 450
+ +L + + + + + ++ ++ D
Sbjct: 211 PADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKN 270
Query: 451 ETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHP----VW 506
+ + + ++ S D S + + + G+
Sbjct: 271 ASIKRV-PLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSLAS 329
Query: 507 DIKFSP 512
F+
Sbjct: 330 VRLFTR 335
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 79.4 bits (194), Expect = 2e-16
Identities = 20/212 (9%), Positives = 47/212 (22%), Gaps = 29/212 (13%)
Query: 453 TRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSP 512
+ P D SL V + + +S
Sbjct: 149 DCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEI----THTEVFHPEDEFLINHPAYSQ 204
Query: 513 HGYYFASAGHDRMARLWATDS----------------------YHPLRLFVGHYSDVDCV 550
+ S + H +
Sbjct: 205 KAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIY 264
Query: 551 QFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGR--FLASAGGDG 608
+ ++ R + + D TG + + +++ S + A + GD
Sbjct: 265 LLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH-EIDSINVSQDEKPLLYALSTGDK 323
Query: 609 NVHMWDLSNGHLLTLLTGHTDVVRALCFSRDG 640
+++ D +G L + + + + G
Sbjct: 324 TLYIHDAESGEELRSVNQLGHGPQVITTADMG 355
Score = 64.0 bits (154), Expect = 2e-11
Identities = 27/264 (10%), Positives = 57/264 (21%), Gaps = 52/264 (19%)
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCS----------QDNTIRLWSLLL 491
++D + G P + D S + S + + + ++ +
Sbjct: 30 QFVIDGEAGRVIGMIDGGFLPN--PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT 87
Query: 492 WRCLVVYKGH-------GHPVWDIKFSPHGY--YFASAGHDRMARLWATDSYHPLRLFVG 542
+ G W +P G F + + R+
Sbjct: 88 LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV 147
Query: 543 HYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLL------TGHKAPVYALSFSV 596
F + D ++ T + + + ++S
Sbjct: 148 PDCY---HIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQ 204
Query: 597 CGRFLASAGGDGNVHMWDLSNGHLL----------------------TLLTGHTDVVRAL 634
L G +H DLS+G + H + R
Sbjct: 205 KAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIY 264
Query: 635 CFSRDGNILASSGQDCSVKLWDFA 658
+ V + D
Sbjct: 265 LLVDQRDEWRHKTASRFVVVLDAK 288
Score = 44.0 bits (102), Expect = 4e-05
Identities = 13/101 (12%), Positives = 26/101 (25%), Gaps = 12/101 (11%)
Query: 560 ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAG----------GDGN 609
A ++ + D G + ++ G P + G F+A A
Sbjct: 22 AHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDY 79
Query: 610 VHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDC 650
V ++D + + L G+
Sbjct: 80 VEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTL 120
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 73.1 bits (177), Expect = 1e-14
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 576 GSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLL-TLLTGHTDVVRAL 634
GS ++ GH + ALS S G+ L SA +G+++ WD+S G H ++ +
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGI 61
Query: 635 CFSRDGNILASSGQDCSVKLWD 656
+ G++ S D +K+
Sbjct: 62 KTTSKGDLFTVSWDDH-LKVVP 82
Score = 72.7 bits (176), Expect = 1e-14
Identities = 18/123 (14%), Positives = 33/123 (26%), Gaps = 3/123 (2%)
Query: 454 RTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVY-KGHGHPVWDIKFSP 512
+ GH + LS S D L S + I W + V+ H + IK +
Sbjct: 6 QVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTS 65
Query: 513 HGYYFASAGHD--RMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRL 570
G F + D ++ + + S + + +
Sbjct: 66 KGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIY 125
Query: 571 WDC 573
Sbjct: 126 SHG 128
Score = 71.9 bits (174), Expect = 3e-14
Identities = 37/284 (13%), Positives = 79/284 (27%), Gaps = 19/284 (6%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQKLK--------------AMKSSDQLQDIEM 435
+T S D L +E +I W + S L +
Sbjct: 15 ITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSW 74
Query: 436 ECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCL 495
+ +V + L+ S D + ++ I ++S +
Sbjct: 75 DDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC-YKHIAIYSHGKLTEV 133
Query: 496 VVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPN 555
+ + A+ S + + V
Sbjct: 134 PISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAF 193
Query: 556 SNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
+ + +H T H A V +S+S LA+ D +V +W++
Sbjct: 194 LVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNM 253
Query: 616 SNG---HLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ ++ V ++ + + + S+GQD ++K W+
Sbjct: 254 NKPSDHPIIIKGAHAMSSVNSVIWL-NETTIVSAGQDSNIKFWN 296
Score = 70.8 bits (171), Expect = 7e-14
Identities = 11/85 (12%), Positives = 28/85 (32%), Gaps = 2/85 (2%)
Query: 537 LRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVR-LLTGHKAPVYALSFS 595
++ GH + + + + + ++ I WD TG R H + + +
Sbjct: 5 DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTT 64
Query: 596 VCGRFLASAGGDGNVHMWDLSNGHL 620
L + D ++ + +
Sbjct: 65 SK-GDLFTVSWDDHLKVVPAGGSGV 88
Score = 68.5 bits (165), Expect = 4e-13
Identities = 21/127 (16%), Positives = 42/127 (33%), Gaps = 2/127 (1%)
Query: 492 WRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQ 551
+V+ V + + + H + V CV
Sbjct: 172 EVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVS 231
Query: 552 FHPNSNYVATGSSDRTIRLWDCVTGSHVRLLT--GHKAPVYALSFSVCGRFLASAGGDGN 609
+ P++ +ATGS D ++ +W+ S ++ H + + SAG D N
Sbjct: 232 WSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSN 291
Query: 610 VHMWDLS 616
+ W++
Sbjct: 292 IKFWNVP 298
Score = 60.8 bits (145), Expect = 1e-10
Identities = 17/124 (13%), Positives = 33/124 (26%), Gaps = 3/124 (2%)
Query: 493 RCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFV-GHYSDVDCVQ 551
V GH + + S G SA + W + R+F H + + ++
Sbjct: 3 SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIK 62
Query: 552 FHPNSNYVATGSSD--RTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGN 609
+ D + + S + + L+ S G +A
Sbjct: 63 TTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHI 122
Query: 610 VHMW 613
Sbjct: 123 AIYS 126
Score = 58.5 bits (139), Expect = 8e-10
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 618 GHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAK 659
G + + GH + AL S DG L S+ + + WD +
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDIST 43
Score = 46.1 bits (107), Expect = 8e-06
Identities = 8/55 (14%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
Query: 437 CDDILVRIMDERNAETTRTLV--GHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSL 489
D V + + ++ H + + ++S QD+ I+ W++
Sbjct: 243 SLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 71.9 bits (174), Expect = 2e-14
Identities = 37/279 (13%), Positives = 80/279 (28%), Gaps = 21/279 (7%)
Query: 390 VTCAEISEDVSILAVGFSESYIKLWSLVPQKLKAMKSSDQLQDIEMECDDILVRIMDERN 449
+T V+ L G + I WS S+ + ++ I +
Sbjct: 16 ITAL----TVNPLISGSYDGRIMEWSSSSMH---QDHSNLIVSLDNSKAQEYSSISWDDT 68
Query: 450 AETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIK 509
+ G K++ + + + D+ + + + + +
Sbjct: 69 LKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSL 128
Query: 510 FSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIR 569
+ + + +D L + + P+ Y+A G I
Sbjct: 129 S-QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKIL 187
Query: 570 LWDCVTGSHVRLLTGHKAPV-----------YALSFSVCGRFLASAGGDGNVHMWDLSN- 617
L+D + + A + +A+ D N+ ++ +
Sbjct: 188 LYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRP 247
Query: 618 GHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWD 656
++ L H D V L + L SSG D +K W+
Sbjct: 248 MKIIKALNAHKDGVNNLLWETPS-TLVSSGADACIKRWN 285
Score = 70.0 bits (169), Expect = 1e-13
Identities = 36/272 (13%), Positives = 79/272 (29%), Gaps = 55/272 (20%)
Query: 449 NAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDI 508
+ E +T+ GH + L+ +P L+S S D I WS +++ H + + +
Sbjct: 2 HDEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSS-----SSMHQDHSNLIVSL 52
Query: 509 KFSPHGYYFASAGHDRMAR--------------------------------LWATDSYHP 536
S Y + + D + L
Sbjct: 53 DNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGD 112
Query: 537 LRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSV 596
+ V S V N V + L T +A +S S
Sbjct: 113 IIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISP 172
Query: 597 CGRFLASAGGDGNVHMWDLSN-----------GHLLTLLTGHTDVVRALCFSRDGNILAS 645
++A+ G + ++DL + + ++ A + +++A+
Sbjct: 173 SETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVAT 232
Query: 646 SGQDCSVKLWDFAKLSDEVGTEEVNLSHSADI 677
D ++ ++ + + +H +
Sbjct: 233 GSLDTNIFIYSVKRPMKIIKALN---AHKDGV 261
Score = 62.3 bits (149), Expect = 3e-11
Identities = 8/84 (9%), Positives = 24/84 (28%), Gaps = 2/84 (2%)
Query: 492 WRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLW-ATDSYHPLRLFVGHYSDVDCV 550
+ + A+ D ++ ++ H V+ +
Sbjct: 205 TSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNL 264
Query: 551 QFHPNSNYVATGSSDRTIRLWDCV 574
+ + + + +D I+ W+ V
Sbjct: 265 LWETP-STLVSSGADACIKRWNVV 287
Score = 51.5 bits (121), Expect = 1e-07
Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 437 CDDILVRIMD-ERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL 490
D + I +R + + L H+ V L + S L+S D I+ W+++
Sbjct: 234 SLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETP-STLVSSGADACIKRWNVV 287
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 72.9 bits (178), Expect = 3e-14
Identities = 28/227 (12%), Positives = 58/227 (25%), Gaps = 12/227 (5%)
Query: 441 LVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLL-SCSQDNTIRLWSLLLWRCLVVYK 499
+I R E V + S R + + + I L L +
Sbjct: 143 PKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTE 202
Query: 500 -GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY 558
+ D YF +A + R + L N +
Sbjct: 203 ISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVH 262
Query: 559 VATGSSDRTIRLWDC---VTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDL 615
G T + D + G+ + + ++ G L + +++
Sbjct: 263 PTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLY-- 320
Query: 616 SNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSD 662
+ L ++ ++ D + G D K A+ +
Sbjct: 321 ----VDATLNPEAEISGSVAVF-DIKAMTGDGSDPEFKTLPIAEWAG 362
Score = 71.8 bits (175), Expect = 8e-14
Identities = 24/238 (10%), Positives = 52/238 (21%), Gaps = 20/238 (8%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
D + ++D E L S L +D + + L + V
Sbjct: 40 DAGQIALIDGSTYEIKTVLDTGYAVHI-SRLSASGRYLFVIGRDGKVNMIDLWMKEPTTV 98
Query: 498 Y-----KGHGHPVWDIKFSPHG-YYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQ 551
Y A A + ++ P ++ D +
Sbjct: 99 AEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQE 158
Query: 552 FHPNSNY------------VATGSSDRTIRLWDCVTGSHVRLLTGHKAPV-YALSFSVCG 598
+HP + I L D ++++ +
Sbjct: 159 YHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSH 218
Query: 599 RFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWD 656
R+ +A N + + L + + + + D
Sbjct: 219 RYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGD 276
Score = 65.2 bits (158), Expect = 9e-12
Identities = 24/223 (10%), Positives = 54/223 (24%), Gaps = 20/223 (8%)
Query: 466 LSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRM 525
+ + ++ I L + V G+ V + S G Y G D
Sbjct: 26 NDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGK 84
Query: 526 ARLWATDSYHP-----LRLFVGHYSDVDCVQFHPNSNYV-ATGSSDRTIRLWDCVTGSHV 579
+ P +++ S Y A + D T
Sbjct: 85 VNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPK 144
Query: 580 RLLTGHKAPVYALSFSVCGR------------FLASAGGDGNVHMWDLSNGHLLTLLTGH 627
++ + + R F+ + G + + D ++ + L
Sbjct: 145 KIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS 204
Query: 628 TD-VVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEV 669
+ + ++ + + K V E+
Sbjct: 205 AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDT 247
Score = 56.0 bits (134), Expect = 9e-09
Identities = 18/186 (9%), Positives = 46/186 (24%), Gaps = 22/186 (11%)
Query: 492 WRCLV-VYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCV 550
W+ V + D + + L +Y + Y+ V
Sbjct: 11 WKVHVAPEDRPTQQMNDW--DLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYA-VHIS 67
Query: 551 QFHPNSNYVATGSSDRTIRLWDCVTGSH-----VRLLTGHKAPVYALSFSVCGRFL-ASA 604
+ + Y+ D + + D +++ + ++ + ++ A A
Sbjct: 68 RLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGA 127
Query: 605 GGDGNVHMWDLSNGHLL-----------TLLTGHTDVVRALCFSRDGNILASSGQD-CSV 652
+ D V A+ S + ++ +
Sbjct: 128 YWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKI 187
Query: 653 KLWDFA 658
L D+
Sbjct: 188 LLVDYT 193
Score = 30.1 bits (67), Expect = 0.84
Identities = 14/148 (9%), Positives = 32/148 (21%), Gaps = 25/148 (16%)
Query: 452 TTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHP-VWDIKF 510
+ + + L + N+ L+ V + +
Sbjct: 285 DPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLY--------VDATLNPEAEISGSVA 336
Query: 511 SPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGS------- 563
G D + + + V +F+ + V
Sbjct: 337 VFDIKAMTGDGSDPEFKTLPIAEWAGI---TEGQPRVVQGEFNKDGTEVWFSVWNGKDQE 393
Query: 564 ------SDRTIRLWDCVTGSHVRLLTGH 585
D+T+ L + + TG
Sbjct: 394 SALVVVDDKTLELKHVIKDERLVTPTGK 421
Score = 29.0 bits (64), Expect = 2.1
Identities = 8/69 (11%), Positives = 18/69 (26%), Gaps = 4/69 (5%)
Query: 446 DERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPV 505
+ + TL ++ D + D + + W + V
Sbjct: 315 NSQYLYVDATLNPEAEISGSVAV-FDIKAMTGDGSDPEFKTLPIAEWAGI---TEGQPRV 370
Query: 506 WDIKFSPHG 514
+F+ G
Sbjct: 371 VQGEFNKDG 379
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 67.3 bits (163), Expect = 2e-12
Identities = 27/189 (14%), Positives = 51/189 (26%), Gaps = 8/189 (4%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVV 497
D + ++D + + + + S LL +D I + L V
Sbjct: 40 DAGQIALVDGDSKKIVKVIDTGYAV-HISRMSASGRYLLVIGRDARIDMIDLWAKEPTKV 98
Query: 498 Y-----KGHGHPVWDIKFSPHG-YYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQ 551
Y A A + ++ P ++ VD
Sbjct: 99 AEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQT 158
Query: 552 FHPNSNYVATGSSDRTIRLWDCVTGS-HVRLLTGHKAPVYALSFSVCGRFLASAGGDGNV 610
+HP A +S V + V L+ ++ FLA G D +
Sbjct: 159 YHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSH 218
Query: 611 HMWDLSNGH 619
+ + +
Sbjct: 219 RYFMTAANN 227
Score = 55.7 bits (133), Expect = 1e-08
Identities = 29/242 (11%), Positives = 65/242 (26%), Gaps = 22/242 (9%)
Query: 450 AETTRTLVGHEGPVRKLSFSPDRS--LLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWD 507
E+ + LV E +K D ++ I L + + V
Sbjct: 8 RESWKVLVKPEDRPKKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAV-HI 66
Query: 508 IKFSPHGYYFASAGHDRMARLWATDSYHP-----LRLFVGHYSDVDCVQFHPNSNYV-AT 561
+ S G Y G D + + P +++ + S Y A
Sbjct: 67 SRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAG 126
Query: 562 GSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSV------------CGRFLASAGGDGN 609
+ D T ++++ V ++ F+ + G
Sbjct: 127 AYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGK 186
Query: 610 VHMWDLSNGHLLTLLT-GHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEE 668
V + + + LT+ + G + + ++ + + +K +
Sbjct: 187 VLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVD 246
Query: 669 VN 670
V
Sbjct: 247 VG 248
Score = 55.3 bits (132), Expect = 1e-08
Identities = 24/195 (12%), Positives = 55/195 (28%), Gaps = 15/195 (7%)
Query: 492 WRCLV-VYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCV 550
W+ LV + D+ + + L DS +++ Y+ V
Sbjct: 11 WKVLVKPEDRPKKQLNDL--DLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHIS 67
Query: 551 QFHPNSNYVATGSSDRTIRLWDCVTGSH-----VRLLTGHKAPVYALSFSVCGRFLASAG 605
+ + Y+ D I + D +++ ++ + R+ +
Sbjct: 68 RMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGA 127
Query: 606 -GDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEV 664
+ D +++ V + + + A + K
Sbjct: 128 YWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK----- 182
Query: 665 GTEEVNLSHSADIKN 679
T +V L + DI N
Sbjct: 183 ETGKVLLVNYKDIDN 197
Score = 42.6 bits (99), Expect = 1e-04
Identities = 18/150 (12%), Positives = 41/150 (27%), Gaps = 24/150 (16%)
Query: 459 HEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFA 518
GPV S D S+ L + ++ W+ + +G G IK P +
Sbjct: 263 KYGPVWSTSHLGDGSISLIGTDPKNHPQYA---WKKVAELQGQGGGSLFIKTHPKSSHLY 319
Query: 519 -------SAGHDRMARLWATDSYHPLRLFVGHYSDVDC---------VQFHPNSNYV--- 559
A + ++ + + D +++ + V
Sbjct: 320 VDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFS 379
Query: 560 --ATGSSDRTIRLWDCVTGSHVRLLTGHKA 587
+ + + D T ++ +
Sbjct: 380 VWNGKNDSSALVVVDDKTLKLKAVVKDPRL 409
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 63.8 bits (154), Expect = 2e-11
Identities = 14/187 (7%), Positives = 34/187 (18%), Gaps = 26/187 (13%)
Query: 456 LVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGY 515
+ S SL S + + G
Sbjct: 169 HIHPGAAATHYLGSCPASLAASDLAAAPAAAG----IVGAQCTGAQNCSSQAAQANYPGM 224
Query: 516 YFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSD---------- 565
+ + G+ S F + +
Sbjct: 225 LVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVE 284
Query: 566 ---------RTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFL--ASAGGDGNVHMWD 614
G ++ + A+ + G A++ G + ++D
Sbjct: 285 HSRSCLAAAENTSSVTASVGQTSGPIS-NGHDSDAIIAAQDGASDNYANSAGTEVLDIYD 343
Query: 615 LSNGHLL 621
++
Sbjct: 344 AASDQDQ 350
Score = 61.9 bits (149), Expect = 9e-11
Identities = 15/246 (6%), Positives = 52/246 (21%), Gaps = 29/246 (11%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDR----------SLLLSCSQDNTIRLW 487
+ T +G + + + + + ++
Sbjct: 44 GTTENWVSCAGCGVTLGHSLGAFLSL--AVAGHSGSDFALASTSFARSAKGKRTDYVEVF 101
Query: 488 SLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGH--------DRMARLWATDSYHPLRL 539
+ + + + P + + H ++ A + +L
Sbjct: 102 DPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQL 161
Query: 540 FVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSH------VRLLTGHKAPVYALS 593
+ GS ++ D + A
Sbjct: 162 TKSASCF---HIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQ 218
Query: 594 FSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVK 653
+ G + + + + + G+ +A F G + + ++
Sbjct: 219 ANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGI 278
Query: 654 LWDFAK 659
+ +
Sbjct: 279 MILTVE 284
Score = 51.9 bits (123), Expect = 1e-07
Identities = 13/159 (8%), Positives = 30/159 (18%), Gaps = 24/159 (15%)
Query: 452 TTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFS 511
+ + + L+ + + G+ F
Sbjct: 203 GAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFR 262
Query: 512 PHG------------YYFASAGHDRMA-------RLWATDSYHPL-RLFVGHYSDVDCVQ 551
G + H R + GH D +
Sbjct: 263 SAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHD--SDAII 320
Query: 552 FHPNSNY--VATGSSDRTIRLWDCVTGSHVRLLTGHKAP 588
+ A + + ++D + + K P
Sbjct: 321 AAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGP 359
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 61.0 bits (146), Expect = 1e-10
Identities = 28/263 (10%), Positives = 61/263 (23%), Gaps = 48/263 (18%)
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPD-RSLLLSCSQDNTIRLWSLLLWRC------ 494
+ ++D + + T T+ P SPD + ++ + N + +
Sbjct: 14 ISVIDVTSNKVTATIPVGSNP-MGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPA 72
Query: 495 -----------------------------------LVVYKGHGHPVWDIKFSPHGYYFAS 519
+ G + SP G
Sbjct: 73 GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYV 132
Query: 520 AGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHV 579
+ + V + P+ V + D + V
Sbjct: 133 TNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSV 192
Query: 580 RLLTGHKAPVYALSFSVCGRFLASAGGDGNVH---MWDLSNGHLLTLLTGHTDVVRALCF 636
+A ++ + G D + M D + + D +
Sbjct: 193 IDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDP-AGIAV 251
Query: 637 SRDGN-ILASSGQDCSVKLWDFA 658
+ DG + + +V + D A
Sbjct: 252 TPDGKKVYVALSFCNTVSVIDTA 274
Score = 51.8 bits (122), Expect = 1e-07
Identities = 9/67 (13%), Positives = 20/67 (29%), Gaps = 3/67 (4%)
Query: 556 SNYV-ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFL-ASAGGDGNVHMW 613
S + S I + D + + P S G + + +V +
Sbjct: 1 STFAYIANSESDNISVIDVTSNKVTATIPVGSNP-MGAVISPDGTKVYVANAHSNDVSII 59
Query: 614 DLSNGHL 620
D + ++
Sbjct: 60 DTATNNV 66
Score = 49.1 bits (115), Expect = 7e-07
Identities = 30/249 (12%), Positives = 71/249 (28%), Gaps = 17/249 (6%)
Query: 395 ISEDVSILAVGFSESY-IKLWSL----------VPQKLKAMKSSDQLQDIEMECDDILVR 443
IS D + + V + S + + + + S + + +
Sbjct: 39 ISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTL 98
Query: 444 IMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGH 503
+ + + T V L+ SPD L + + + + ++ G
Sbjct: 99 SVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR 158
Query: 504 PVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVATGS 563
I +P G A D M+ + + V + + +P +
Sbjct: 159 SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTN 218
Query: 564 SDRTIRLWDCV---TGSHVRLLTGHKAPVYALSFSVCGRFL-ASAGGDGNVHMWDLSNGH 619
D+ + T + P ++ + G+ + + V + D +
Sbjct: 219 VDKYFNTVSMIDTGTNKITARIPVGPDP-AGIAVTPDGKKVYVALSFCNTVSVIDTATNT 277
Query: 620 LL-TLLTGH 627
+ T+ G
Sbjct: 278 ITATMAVGK 286
Score = 47.2 bits (110), Expect = 3e-06
Identities = 17/114 (14%), Positives = 30/114 (26%), Gaps = 8/114 (7%)
Query: 492 WRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQ 551
V + + Y + + T + D +
Sbjct: 192 VIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG-PDPAGIA 250
Query: 552 FHPNSNYV-ATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASA 604
P+ V S T+ + D T + + K P YA G+F+ S
Sbjct: 251 VTPDGKKVYVALSFCNTVSVIDTATNTITATMAVGKNP-YAS-----GQFIGSI 298
Score = 47.2 bits (110), Expect = 4e-06
Identities = 21/182 (11%), Positives = 51/182 (28%), Gaps = 3/182 (1%)
Query: 477 SCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSPHG-YYFASAGHDRMARLWATDSYH 535
+ S+ + I + + + +P SP G + + H + T + +
Sbjct: 7 ANSESDNISVIDVTSNKVTATIPVGSNP-MGAVISPDGTKVYVANAHSNDVSIIDTATNN 65
Query: 536 PLRLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFS 595
+ S T + T+ + D + + + K+P+ L+ S
Sbjct: 66 VIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLG-LALS 124
Query: 596 VCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLW 655
G+ L + + + + + DG + + D
Sbjct: 125 PDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISV 184
Query: 656 DF 657
Sbjct: 185 ID 186
Score = 38.7 bits (88), Expect = 0.002
Identities = 11/88 (12%), Positives = 29/88 (32%), Gaps = 2/88 (2%)
Query: 418 PQKLKAMKSSDQLQDIEMECDDILVRIMDERNAETTRTLVGHEGPVRKLSFSPD-RSLLL 476
P + + ++ V ++D + T + P ++ +PD + + +
Sbjct: 202 PSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDP-AGIAVTPDGKKVYV 260
Query: 477 SCSQDNTIRLWSLLLWRCLVVYKGHGHP 504
+ S NT+ + +P
Sbjct: 261 ALSFCNTVSVIDTATNTITATMAVGKNP 288
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 50.6 bits (119), Expect = 3e-07
Identities = 19/171 (11%), Positives = 43/171 (25%), Gaps = 8/171 (4%)
Query: 438 DDILVRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLL-SCSQDNTIRLWSLLLWRCLV 496
I V ++ A T +V G V+ + SPD+ L + + + + +
Sbjct: 14 QQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGAL 73
Query: 497 VYKGHGHPVWD---IKFSPHGYYFASAGHDRMARL---WATDSYHPLRLFVGHYSDVDCV 550
+ I G + ++ + V
Sbjct: 74 TFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSA 133
Query: 551 QFHPNSNYVATGSSD-RTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRF 600
P++ + + I L+ H+ + + F
Sbjct: 134 NISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVF 184
Score = 48.3 bits (113), Expect = 2e-06
Identities = 12/104 (11%), Positives = 28/104 (26%), Gaps = 7/104 (6%)
Query: 558 YVATGSSDRTIRLWDCVTGSHVRLL--TGHKAPVYALSFSVCGRFLASAG-GDGNVHMWD 614
Y+A + I +W+ + L V + S R+L + V +
Sbjct: 7 YIA-SPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYR 65
Query: 615 LSNGHLLTLLTGHTDVVRALC---FSRDGNILASSGQDCSVKLW 655
++ + + +L G + +
Sbjct: 66 IAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSV 109
Score = 45.2 bits (105), Expect = 2e-05
Identities = 12/59 (20%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Query: 603 SAGGDGNVHMWDLSNGHLLTLL--TGHTDVVRALCFSRDGNIL-ASSGQDCSVKLWDFA 658
++ +H+W+L++ LTL V+ + S D L + V + A
Sbjct: 9 ASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIA 67
Score = 40.2 bits (92), Expect = 6e-04
Identities = 22/180 (12%), Positives = 48/180 (26%), Gaps = 10/180 (5%)
Query: 469 SPDRSLLLSCSQDNTIRLWSLLLWRCLVVYK--GHGHPVWDIKFSPHG-YYFASAGHDRM 525
S +++ ++ + I +W+L L + + V + SP Y + +
Sbjct: 1 SLKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFR 60
Query: 526 ARLWATDS---YHPLRLFVGHYSDVDCVQFHPNSNYVATGSSD----RTIRLWDCVTGSH 578
+ + + +V GS + RL D +
Sbjct: 61 VLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGV 120
Query: 579 VRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSR 638
V ++ G A A + ++ +S+ L R
Sbjct: 121 VDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPR 180
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia
coli [TaxId: 562]}
Length = 269
Score = 43.3 bits (100), Expect = 6e-05
Identities = 26/225 (11%), Positives = 61/225 (27%), Gaps = 11/225 (4%)
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLL--LWRCLVVYK 499
+R+ D + + P+ ++SPD S L + ++ + +
Sbjct: 21 LRVSD-YDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVA 79
Query: 500 GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRL-----FVGHYSDVDCVQFHP 554
FSP G A A + ++ + ++
Sbjct: 80 SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQ 139
Query: 555 NSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWD 614
N + + + + + G+ R+ A S + + G H+
Sbjct: 140 NLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAK 199
Query: 615 LSNGHLLTLLTGHTDVVRALCFSRDGNILA---SSGQDCSVKLWD 656
+ T + + +G ++ S G + L
Sbjct: 200 QDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVS 244
Score = 39.8 bits (91), Expect = 7e-04
Identities = 12/115 (10%), Positives = 25/115 (21%), Gaps = 4/115 (3%)
Query: 484 IRLWSLLLWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGH 543
+ ++ + S + + + + D +
Sbjct: 153 VYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSS 212
Query: 544 YSDVDCVQFHPNSNYVATGSSDRT---IRLWDCVTGSHVRLLTGHKAPVYALSFS 595
+ PN V SS + L G L V ++S
Sbjct: 213 TFLDETPSLAPNGTMVIYSSSQGMGSVLNLVS-TDGRFKARLPATDGQVKFPAWS 266
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain
{Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Length = 281
Score = 40.5 bits (93), Expect = 4e-04
Identities = 25/238 (10%), Positives = 52/238 (21%), Gaps = 28/238 (11%)
Query: 444 IMDERNAETTRTLVGHEGPVRKLSFSPDRSLL--LSCSQDNTIRLWSLLLWRCLVVYK-- 499
D ++ T + +V + G + F PD + + K
Sbjct: 25 EHDLKSGSTRK-IVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRI 83
Query: 500 --------GHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPL---RLFVGHYSDVD 548
G F P G S + +
Sbjct: 84 TYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPAT 143
Query: 549 CVQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDG 608
+ F + + + + + + G
Sbjct: 144 HILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHR 203
Query: 609 NVHMWDLS----------NGHLLTLLTGHTDVVRALCFSRDGNILASSGQDCSVKLWD 656
+ D+ +G L T TD + DG + S + S+ +++
Sbjct: 204 IYFITDIDGFGQIYSTDLDGKDLRKHTSFTD-YYPRHLNTDGRRILFS-KGGSIYIFN 259
Score = 31.7 bits (70), Expect = 0.30
Identities = 17/120 (14%), Positives = 31/120 (25%), Gaps = 13/120 (10%)
Query: 563 SSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGN--------VHMWD 614
+ D + R + + + F GR +A G+ + +
Sbjct: 18 VCCDDLWEHD-LKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGE 76
Query: 615 LSNGHLLTLL----TGHTDVVRALCFSRDGNILASSGQDCSVKLWDFAKLSDEVGTEEVN 670
+T TG F DGN++ S+ + G V
Sbjct: 77 NGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVP 136
Score = 31.3 bits (69), Expect = 0.39
Identities = 13/86 (15%), Positives = 27/86 (31%), Gaps = 2/86 (2%)
Query: 588 PVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSG 647
P L+ + G + ++ DL +G + + V+ F DG +A
Sbjct: 2 PNLLLNPDIHGDRIIFVC-CDDLWEHDLKSGST-RKIVSNLGVINNARFFPDGRKIAIRV 59
Query: 648 QDCSVKLWDFAKLSDEVGTEEVNLSH 673
S + E +++
Sbjct: 60 MRGSSLNTADLYFYNGENGEIKRITY 85
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue
{Nostoc punctiforme [TaxId: 272131]}
Length = 302
Score = 40.0 bits (92), Expect = 6e-04
Identities = 26/194 (13%), Positives = 57/194 (29%), Gaps = 8/194 (4%)
Query: 466 LSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFSP-HGYYFASAGHDR 524
L+ +PD ++ ++ + I + ++ V + F+ D
Sbjct: 33 LASAPDGTIFVTNHEVGEIVSIT--PDGNQQIHATVEGKVSGLAFTSNGDLVATGWNADS 90
Query: 525 MARLWATDSYHPLRLFV--GHYSDVDCVQFHPNSNYVATGSSDRTIRLWDCVTGSHV-RL 581
+ + S + + ++ + ++ Y+ S I L D V S L
Sbjct: 91 IPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWL 150
Query: 582 LTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGN 641
A + S L G +++ + LL + TD +
Sbjct: 151 EHPMLARSNSESVFPAANGLKRFG--NFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQT 208
Query: 642 ILASSGQDCSVKLW 655
+ D L+
Sbjct: 209 NIDDFAFDVEGNLY 222
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26,
N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 470
Score = 38.6 bits (88), Expect = 0.002
Identities = 21/212 (9%), Positives = 50/212 (23%), Gaps = 23/212 (10%)
Query: 452 TTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGHGHPVWDIKFS 511
T + S SPD +L N ++ W +Y + + +
Sbjct: 53 ENSTFDEFGHSINDYSISPDGQFILLEY--NYVKQWRHSYTASYDIYDLNKRQLITEERI 110
Query: 512 PHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNY-------VATGSS 564
P+ + + + ++ +++ S + Y
Sbjct: 111 PNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVF 170
Query: 565 DRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGR--------------FLASAGGDGNV 610
LW G+ + + V + +S +
Sbjct: 171 SAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKF 230
Query: 611 HMWDLSNGHLLTLLTGHTDVVRALCFSRDGNI 642
+ + + +T T A D +
Sbjct: 231 FVVNTDSLSSVTNATSIQITAPASMLIGDHYL 262
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 38.4 bits (89), Expect = 0.002
Identities = 19/205 (9%), Positives = 38/205 (18%), Gaps = 20/205 (9%)
Query: 442 VRIMDERNAETTRTLVGHEGPVRKLSFSPDRSLLLSCSQDNTIRLWSLLLWRCLVVYKGH 501
+ +V R + + +
Sbjct: 200 AVDLAGTMRNDRDWVVVFNVE-RIAAAVKAGNFKTIGD-SKVPVVDGRGESEFTRYIPVP 257
Query: 502 GHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQFHPNSNYVAT 561
+P Y+ A+ + A D LF D + P
Sbjct: 258 KNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKL--DDLFEDKIELRDTIVAEPELGLGPL 315
Query: 562 GSS-DRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNVHMWDLSNGHL 620
++ D + + V + + + + D+
Sbjct: 316 HTTFDGRGNAYT---------TLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQY--- 363
Query: 621 LTLLTGHTDVVRALCFSRDGNILAS 645
GH DG L
Sbjct: 364 ---QPGHNHASLTESRDADGKWLVV 385
Score = 32.2 bits (73), Expect = 0.19
Identities = 22/156 (14%), Positives = 43/156 (27%), Gaps = 19/156 (12%)
Query: 514 GYY-FASAGHDRMARLWATDSYHPL-RLFVGHYSDVDCVQFHPNSNYVATGSSDRTIRLW 571
YY F S GH R+ S L R+ V F+ +S G ++ + +
Sbjct: 10 EYYGFWSGGHQGEVRVLGVPSMRELMRIPV----------FNVDSATGW-GITNESKEIL 58
Query: 572 DCVTGSHVRLLTGHKAPVYALSFSVCGRFL-ASAGGDGNVHMWDLSNGHLL-TLLTGHTD 629
++ H G++L + + V L +
Sbjct: 59 GGDQQ-YLNGDCHHPHISMT-DGRYDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQ 116
Query: 630 VVRALCFSRDGNIL--ASSGQDCSVKLWDFAKLSDE 663
+ L + + + + D S +
Sbjct: 117 AIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLD 152
>d1jvra_ a.61.1.2 (A:) HTLV-II matrix protein {Human T-cell leukemia
virus type 2 [TaxId: 11909]}
Length = 137
Score = 35.6 bits (82), Expect = 0.006
Identities = 23/75 (30%), Positives = 29/75 (38%), Gaps = 8/75 (10%)
Query: 4 LPSLMDDPPQESFHSVPIIQQTLSPQQPPVSPQHQNMMSPIQQHSLSPHTQAPSPQPPAQ 63
L SL+ P+ V I L Q S + +PI P T P P PP+
Sbjct: 69 LASLI---PKGYPGRVVEIINILVKNQVSPSAPAAPVPTPI-----CPTTTPPPPPPPSP 120
Query: 64 PQQVPSPYHTPPPSQ 78
VP PY P +Q
Sbjct: 121 EAHVPPPYVEPTTTQ 135
Score = 28.3 bits (63), Expect = 1.5
Identities = 11/59 (18%), Positives = 17/59 (28%)
Query: 20 PIIQQTLSPQQPPVSPQHQNMMSPIQQHSLSPHTQAPSPQPPAQPQQVPSPYHTPPPSQ 78
PI L+ P P + I + + +P P P PP +
Sbjct: 63 PIDYSLLASLIPKGYPGRVVEIINILVKNQVSPSAPAAPVPTPICPTTTPPPPPPPSPE 121
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase
(phosphotriesterase, DFP) {Squid (Loligo vulgaris)
[TaxId: 6622]}
Length = 314
Score = 33.9 bits (76), Expect = 0.056
Identities = 13/153 (8%), Positives = 32/153 (20%), Gaps = 9/153 (5%)
Query: 491 LWRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCV 550
+ F+ G + A + R + ++
Sbjct: 139 VAPADYTRSMQEKFGSIYCFTTDGQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTK 198
Query: 551 QFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHKAPVYALSFSVCGRFLASAGGDGNV 610
+ S D + H+ + F L + G ++
Sbjct: 199 KLW---------SYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHI 249
Query: 611 HMWDLSNGHLLTLLTGHTDVVRALCFSRDGNIL 643
++ G + + L F +
Sbjct: 250 EVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTI 282
>d1qxma1 b.42.2.1 (A:4-148) Hemagglutinin component Ha1 {Clostridium
botulinum D phage [TaxId: 29342]}
Length = 145
Score = 30.0 bits (67), Expect = 0.42
Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 3/67 (4%)
Query: 555 NSNYVATGSSDRTIRLWDCVTG--SHVRLLTGHKAPVYALSFSVCGRFLASAGGDG-NVH 611
N+N V S ++LW+ ++G RL+ Y + + + +V
Sbjct: 19 NTNKVLDKISQSEVKLWNKLSGANQKWRLIYDTNKQAYKIKVMDNTSLILTWNAPLSSVS 78
Query: 612 MWDLSNG 618
+ +NG
Sbjct: 79 VKTDTNG 85
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 279
Score = 31.2 bits (69), Expect = 0.42
Identities = 13/125 (10%), Positives = 34/125 (27%), Gaps = 5/125 (4%)
Query: 492 WRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWATDSYHPLRLFVGHYSDVDCVQ 551
K P + + + + Y G + V
Sbjct: 147 LHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVG 206
Query: 552 FHPNSN-YVATGSSDRTIRLWDCVTGSHVRLLT--GHKAPVYALSFSVCGRFLASAGGDG 608
+ N +A ++ + ++ G + L A + ++ G + A D
Sbjct: 207 INSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGS-VVLASKDY 264
Query: 609 NVHMW 613
++++
Sbjct: 265 RLYIY 269
>d1g9la_ a.144.1.1 (A:) poly(A) binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 144
Score = 28.4 bits (63), Expect = 1.4
Identities = 12/61 (19%), Positives = 18/61 (29%), Gaps = 5/61 (8%)
Query: 27 SPQQPPVSPQ--HQNMMSPIQQHSLSPHTQAPSPQPPAQPQQVPSPYHTPPPSQTSKQSG 84
+P V + +P Q + P + Q PA Q P + Q
Sbjct: 10 TPAVRTVPQYKYAAGVRNPQQHLNAQP---QVTMQQPAVHVQGQEPLTASMLASAPPQEQ 66
Query: 85 K 85
K
Sbjct: 67 K 67
>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding
protein 1 (GBP1), C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 300
Score = 29.3 bits (65), Expect = 1.5
Identities = 26/165 (15%), Positives = 61/165 (36%), Gaps = 9/165 (5%)
Query: 133 LSAYESEGDPNLYEDAYQDLKKF-----IENSLDVYKYELGLVLY-PVLVHMYIELVYNG 186
++A S P + E+A L + ++ ++ Y+ ++G + P + ++
Sbjct: 18 VNAISSGDLPCM-ENAVLALAQIENSAAVQKAIAHYEQQMGQKVQLPTESLQELLDLHRD 76
Query: 187 HEHQATEMLHKHLM-DHEPHYQEDLRKLSSVTKRDQIRTNEIAETFRSTEFIIRMSRDTL 245
E +A E+ + D + +Q++L + D + N+ A + R + + +
Sbjct: 77 SEREAIEVFIRSSFKDVDHLFQKELAAQLEKKRDDFCKQNQEASSDRCSGLLQVIFSPLE 136
Query: 246 SLLKRHLQEKKHTVLLNIVQEHLYFDMYEGEATRQDNKAKIYYGM 290
+K K VQ+ E R+ +A+
Sbjct: 137 EEVKA-GIYSKPGGYRLFVQKLQDLKKKYYEEPRKGIQAEEILQT 180
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein
6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 465
Score = 28.8 bits (63), Expect = 2.6
Identities = 13/106 (12%), Positives = 31/106 (29%), Gaps = 15/106 (14%)
Query: 550 VQFHPNSNYVATGSSDRTIRLWDCVTGSHVRLLTGHK---APVYALSFSVCGRFLASA-- 604
++ ++ ++ T+RLW+ T + L+ G K S + +
Sbjct: 22 AKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYN 80
Query: 605 -------GGDGNVHMWDLSNGHL--LTLLTGHTDVVRALCFSRDGN 641
G + + +G L ++ + G
Sbjct: 81 VEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQ 126
>d1f74a_ c.1.10.1 (A:) N-acetylneuraminate lyase {Haemophilus
influenzae [TaxId: 727]}
Length = 293
Score = 28.5 bits (62), Expect = 2.8
Identities = 6/22 (27%), Positives = 11/22 (50%)
Query: 343 RIPLPPLKDSEKIDKLKALREA 364
R P+ +E++ K K L+
Sbjct: 269 REPMTSKATAEQVAKAKDLKAK 290
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus
sp., strain b0618 [TaxId: 1409]}
Length = 281
Score = 28.5 bits (62), Expect = 2.8
Identities = 12/50 (24%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 492 WRCLVVYKGHGHPVWDIKFSPHGYYFASAGHDRMARLWAT-DSYHPLRLF 540
+ ++ H + V FS HG+ F+S + +++L T + H + +F
Sbjct: 220 HFIIDLHPEHSNVVIAAGFSGHGFKFSSGVGEVLSQLALTGKTEHDISIF 269
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus
[TaxId: 1280]}
Length = 319
Score = 28.5 bits (62), Expect = 2.9
Identities = 8/52 (15%), Positives = 16/52 (30%)
Query: 598 GRFLASAGGDGNVHMWDLSNGHLLTLLTGHTDVVRALCFSRDGNILASSGQD 649
G+ +GN+ + + H A+ +DG + D
Sbjct: 51 GQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGD 102
>d2ivya1 d.58.58.1 (A:2-89) Hypothetical protein SSO1404 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 88
Score = 26.3 bits (58), Expect = 3.6
Identities = 5/41 (12%), Positives = 14/41 (34%)
Query: 134 SAYESEGDPNLYEDAYQDLKKFIENSLDVYKYELGLVLYPV 174
S + + + + +D LK +++ P+
Sbjct: 34 SVFMGDLNSSRLKDVEAGLKIIGNRKKLQEDERFFILIVPI 74
>d2vk9a1 c.68.1.22 (A:2-541) Alpha-toxin {Clostridium novyi [TaxId:
1542]}
Length = 540
Score = 27.9 bits (62), Expect = 4.8
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 142 PNLYEDAYQDLKKFIENSLDV 162
PN+Y A D FI+N+ D+
Sbjct: 476 PNIYSSATCDTYHFIKNTFDM 496
>d2gqba1 a.282.1.1 (A:1-130) Hypothetical protein RPA2825
{Rhodopseudomonas palustris [TaxId: 1076]}
Length = 130
Score = 26.7 bits (59), Expect = 5.7
Identities = 15/85 (17%), Positives = 29/85 (34%), Gaps = 15/85 (17%)
Query: 55 APSPQPPAQPQQVPSPYHTPPPSQTS--------KQSGKAPDK----NTLITMLKLLRQY 102
+ P +P P + S K +K +++ ++K L
Sbjct: 21 GGAQAPATTGAAGTAPTAPQPTAAPSIDVAPILDKAVKAKGEKLEWRTSIVDLMKALDID 80
Query: 103 NLRGTEEQLKKEINVNDLGIDPNDS 127
+ ++L KE+ + D NDS
Sbjct: 81 SSLSARKELAKELGYS---GDMNDS 102
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.133 0.397
Gapped
Lambda K H
0.267 0.0582 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,601,129
Number of extensions: 123355
Number of successful extensions: 890
Number of sequences better than 10.0: 1
Number of HSP's gapped: 592
Number of HSP's successfully gapped: 183
Length of query: 711
Length of database: 2,407,596
Length adjustment: 92
Effective length of query: 619
Effective length of database: 1,144,436
Effective search space: 708405884
Effective search space used: 708405884
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (25.7 bits)