Your job contains 1 sequence.
>psy14441
MSSRALTSLASCARKYLPCDILLKIQSVPTIPQVEQNITYRIQNITQHFNSHSFLFRKQR
NVYLHCLLVMLNFMSFNLCQHSLKAHSHGHASIHDMHMPVACHFVLSSLLKALLPVIGSQ
MVQQVRRSHAYSKKPPVTIDDLPVPQGSWKAHYDKQNTKYNIQLLVGTVSLAATIGYLAV
SDVFIWNFFPPTLPKNEVLSFPAKDLSMLNSVDSDHSQVMNSFSNSMEVDQNSSQSSTQS
PAAQVMQKTNMPSSTPNDQILGKDKLDELMRQVDSTLQIDEEVYDTFSEIANDFVDNIVH
RACQLAKHRGSSTLDPKDLQFVLAKDWNISIPGYGTDELKPYKRPMATEAHKQRLALIRK
HLKKY
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14441
(365 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q3T174 - symbol:TAF12 "Transcription initiation... 321 7.1e-29 1
UNIPROTKB|E2QVZ3 - symbol:TAF12 "Uncharacterized protein"... 321 7.1e-29 1
UNIPROTKB|Q16514 - symbol:TAF12 "Transcription initiation... 321 7.1e-29 1
MGI|MGI:1913714 - symbol:Taf12 "TAF12 RNA polymerase II, ... 321 7.1e-29 1
RGD|1592841 - symbol:Taf12 "TAF12 RNA polymerase II, TATA... 321 7.1e-29 1
ZFIN|ZDB-GENE-031030-5 - symbol:taf12 "TAF12 RNA polymera... 318 1.5e-28 1
UNIPROTKB|Q5ZKX3 - symbol:TAF12 "Uncharacterized protein"... 313 5.0e-28 1
UNIPROTKB|I3LKU2 - symbol:TAF12 "Uncharacterized protein"... 303 5.7e-27 1
FB|FBgn0011290 - symbol:Taf12 "TBP-associated factor 12" ... 297 2.5e-26 1
UNIPROTKB|G3MXQ4 - symbol:G3MXQ4 "Uncharacterized protein... 272 1.1e-23 1
TAIR|locus:2100053 - symbol:TAF12 "TBP-associated factor ... 265 3.3e-22 1
DICTYBASE|DDB_G0274697 - symbol:taf12 "TFIID subunit" spe... 253 1.2e-19 1
TAIR|locus:2018861 - symbol:EER4 "ENHANCED ETHYLENE RESPO... 232 8.5e-17 1
WB|WBGene00006396 - symbol:taf-12 species:6239 "Caenorhab... 209 4.6e-16 2
UNIPROTKB|D4A8J1 - symbol:D4A8J1 "Uncharacterized protein... 201 9.1e-16 1
UNIPROTKB|J9NXV6 - symbol:J9NXV6 "Uncharacterized protein... 195 4.3e-15 1
POMBASE|SPAC15A10.02 - symbol:taf12 "transcription factor... 212 8.2e-15 1
UNIPROTKB|G4NDQ9 - symbol:MGG_00885 "Uncharacterized prot... 200 6.4e-13 1
CGD|CAL0005789 - symbol:orf19.470 species:5476 "Candida a... 200 1.1e-12 2
SGD|S000002552 - symbol:TAF12 "Subunit (61/68 kDa) of TFI... 188 7.5e-12 1
ASPGD|ASPL0000036544 - symbol:AN2769 species:162425 "Emer... 184 2.5e-11 1
FB|FBgn0040793 - symbol:CG7630 species:7227 "Drosophila m... 140 5.3e-09 1
FB|FBgn0031623 - symbol:Taf12L "TBP-associated factor 30k... 128 1.1e-07 1
WB|WBGene00000263 - symbol:F23H11.5 species:6239 "Caenorh... 82 9.8e-05 2
>UNIPROTKB|Q3T174 [details] [associations]
symbol:TAF12 "Transcription initiation factor TFIID subunit
12" species:9913 "Bos taurus" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA]
InterPro:IPR003228 InterPro:IPR009072 Pfam:PF03847 ProDom:PD012998
GO:GO:0006355 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0005669 EMBL:BC102082 IPI:IPI00691548 IPI:IPI00826150
RefSeq:NP_001029926.1 UniGene:Bt.24273 ProteinModelPortal:Q3T174
SMR:Q3T174 STRING:Q3T174 PRIDE:Q3T174 Ensembl:ENSBTAT00000037998
GeneID:614227 KEGG:bta:614227 CTD:6883 eggNOG:COG5624
GeneTree:ENSGT00390000002144 HOGENOM:HOG000035092
HOVERGEN:HBG055174 InParanoid:Q3T174 KO:K03126 OMA:KMPGTPS
OrthoDB:EOG4ZCT5X NextBio:20899006 Uniprot:Q3T174
Length = 161
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 59/111 (53%), Positives = 85/111 (76%)
Query: 254 STPNDQILGKDKLDELMRQVDSTLQIDEEVYDTFSEIANDFVDNIVHRACQLAKHRGSST 313
S N+Q+L K KL +L+R+VD Q+DE+V + +IA+DF++++V ACQLA+HR SST
Sbjct: 51 SPENNQVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSST 110
Query: 314 LDPKDLQFVLAKDWNISIPGYGTDELKPYKRPMATEAHKQRLALIRKHLKK 364
L+ KD+Q L + WN+ IPG+G++E++PYK+ TEAHKQR+ALIRK KK
Sbjct: 111 LEVKDVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIRKTTKK 161
>UNIPROTKB|E2QVZ3 [details] [associations]
symbol:TAF12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] InterPro:IPR003228 InterPro:IPR009072 Pfam:PF03847
ProDom:PD012998 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0005669 CTD:6883 GeneTree:ENSGT00390000002144 KO:K03126
OMA:KMPGTPS EMBL:AAEX03006463 RefSeq:XP_535337.2 UniGene:Cfa.10041
Ensembl:ENSCAFT00000018626 Ensembl:ENSCAFT00000037565 GeneID:609994
KEGG:cfa:609994 NextBio:20893961 Uniprot:E2QVZ3
Length = 161
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 59/111 (53%), Positives = 85/111 (76%)
Query: 254 STPNDQILGKDKLDELMRQVDSTLQIDEEVYDTFSEIANDFVDNIVHRACQLAKHRGSST 313
S N+Q+L K KL +L+R+VD Q+DE+V + +IA+DF++++V ACQLA+HR SST
Sbjct: 51 SPENNQVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSST 110
Query: 314 LDPKDLQFVLAKDWNISIPGYGTDELKPYKRPMATEAHKQRLALIRKHLKK 364
L+ KD+Q L + WN+ IPG+G++E++PYK+ TEAHKQR+ALIRK KK
Sbjct: 111 LEVKDVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIRKTTKK 161
>UNIPROTKB|Q16514 [details] [associations]
symbol:TAF12 "Transcription initiation factor TFIID subunit
12" species:9606 "Homo sapiens" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0030914 "STAGA
complex" evidence=IEA;IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004402 "histone
acetyltransferase activity" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=IDA] [GO:0000125
"PCAF complex" evidence=IDA] [GO:0043966 "histone H3 acetylation"
evidence=IDA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0033276
"transcription factor TFTC complex" evidence=IDA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=IDA]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] Reactome:REACT_71
InterPro:IPR003228 InterPro:IPR009072 Pfam:PF03847 ProDom:PD012998
Reactome:REACT_116125 GO:GO:0016032 GO:GO:0051091 GO:GO:0003677
EMBL:CH471059 GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0006368 GO:GO:0008134 GO:GO:0006367 Reactome:REACT_1788
GO:GO:0043966 GO:GO:0005669 GO:GO:0030914 GO:GO:0033276
GO:GO:0000125 EMBL:AL513497 CleanEx:HS_TAF15 CTD:6883
eggNOG:COG5624 HOGENOM:HOG000035092 HOVERGEN:HBG055174 KO:K03126
OMA:KMPGTPS OrthoDB:EOG4ZCT5X EMBL:U57693 EMBL:D50544 EMBL:X84002
EMBL:BT007031 EMBL:AY206865 EMBL:BC011986 IPI:IPI00002806
IPI:IPI00759817 PIR:JC4676 RefSeq:NP_001128690.1 RefSeq:NP_005635.1
UniGene:Hs.530251 PDB:1H3O PDBsum:1H3O ProteinModelPortal:Q16514
SMR:Q16514 DIP:DIP-496N IntAct:Q16514 MINT:MINT-3032603
STRING:Q16514 PhosphoSite:Q16514 DMDM:3024708 PaxDb:Q16514
PRIDE:Q16514 DNASU:6883 Ensembl:ENST00000263974
Ensembl:ENST00000373824 GeneID:6883 KEGG:hsa:6883 UCSC:uc001bqx.3
GeneCards:GC01M028915 HGNC:HGNC:11545 HPA:HPA008519 MIM:600773
neXtProt:NX_Q16514 PharmGKB:PA36320 InParanoid:Q16514
PhylomeDB:Q16514 EvolutionaryTrace:Q16514 GenomeRNAi:6883
NextBio:26891 Bgee:Q16514 CleanEx:HS_TAF12 Genevestigator:Q16514
GermOnline:ENSG00000120656 Uniprot:Q16514
Length = 161
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 59/111 (53%), Positives = 85/111 (76%)
Query: 254 STPNDQILGKDKLDELMRQVDSTLQIDEEVYDTFSEIANDFVDNIVHRACQLAKHRGSST 313
S N+Q+L K KL +L+R+VD Q+DE+V + +IA+DF++++V ACQLA+HR SST
Sbjct: 51 SPENNQVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSST 110
Query: 314 LDPKDLQFVLAKDWNISIPGYGTDELKPYKRPMATEAHKQRLALIRKHLKK 364
L+ KD+Q L + WN+ IPG+G++E++PYK+ TEAHKQR+ALIRK KK
Sbjct: 111 LEVKDVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIRKTTKK 161
>MGI|MGI:1913714 [details] [associations]
symbol:Taf12 "TAF12 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0000125 "PCAF complex" evidence=ISO] [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0030914 "STAGA complex" evidence=ISO;IDA]
[GO:0033276 "transcription factor TFTC complex" evidence=ISO]
[GO:0043966 "histone H3 acetylation" evidence=ISO] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISO] InterPro:IPR003228
InterPro:IPR009072 Pfam:PF03847 ProDom:PD012998 MGI:MGI:1913714
GO:GO:0051091 GO:GO:0003677 GO:GO:0003700 GO:GO:0003713
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0006367 GO:GO:0043966
GO:GO:0004402 GO:GO:0005669 GO:GO:0030914 GO:GO:0033276
GO:GO:0000125 CTD:6883 eggNOG:COG5624 GeneTree:ENSGT00390000002144
HOVERGEN:HBG055174 KO:K03126 OrthoDB:EOG4ZCT5X EMBL:AK007811
EMBL:AK013133 EMBL:AK132927 EMBL:BC019668 IPI:IPI00311877
RefSeq:NP_079855.2 UniGene:Mm.331926 ProteinModelPortal:Q8VE65
SMR:Q8VE65 DIP:DIP-29178N STRING:Q8VE65 PhosphoSite:Q8VE65
PaxDb:Q8VE65 PRIDE:Q8VE65 Ensembl:ENSMUST00000030731 GeneID:66464
KEGG:mmu:66464 UCSC:uc008vax.2 InParanoid:Q8VE65 NextBio:321768
Bgee:Q8VE65 Genevestigator:Q8VE65 GermOnline:ENSMUSG00000028899
Uniprot:Q8VE65
Length = 161
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 59/111 (53%), Positives = 85/111 (76%)
Query: 254 STPNDQILGKDKLDELMRQVDSTLQIDEEVYDTFSEIANDFVDNIVHRACQLAKHRGSST 313
S N+Q+L K KL +L+R+VD Q+DE+V + +IA+DF++++V ACQLA+HR SST
Sbjct: 51 SPENNQVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSST 110
Query: 314 LDPKDLQFVLAKDWNISIPGYGTDELKPYKRPMATEAHKQRLALIRKHLKK 364
L+ KD+Q L + WN+ IPG+G++E++PYK+ TEAHKQR+ALIRK KK
Sbjct: 111 LEVKDVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIRKTTKK 161
>RGD|1592841 [details] [associations]
symbol:Taf12 "TAF12 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0000125 "PCAF complex" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005669 "transcription
factor TFIID complex" evidence=ISO] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=ISO] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0030914 "STAGA
complex" evidence=ISO] [GO:0033276 "transcription factor TFTC
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0004402 "histone acetyltransferase
activity" evidence=ISO] InterPro:IPR003228 InterPro:IPR009072
Pfam:PF03847 ProDom:PD012998 RGD:1592841 GO:GO:0006352
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:CH473968 GO:GO:0005669
CTD:6883 HOVERGEN:HBG055174 KO:K03126 EMBL:BC158610 IPI:IPI00765148
RefSeq:NP_001108508.1 UniGene:Rn.7592 SMR:B0BMY3 GeneID:682902
KEGG:rno:682902 NextBio:723988 Genevestigator:B0BMY3 Uniprot:B0BMY3
Length = 161
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 59/111 (53%), Positives = 85/111 (76%)
Query: 254 STPNDQILGKDKLDELMRQVDSTLQIDEEVYDTFSEIANDFVDNIVHRACQLAKHRGSST 313
S N+Q+L K KL +L+R+VD Q+DE+V + +IA+DF++++V ACQLA+HR SST
Sbjct: 51 SPENNQVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSST 110
Query: 314 LDPKDLQFVLAKDWNISIPGYGTDELKPYKRPMATEAHKQRLALIRKHLKK 364
L+ KD+Q L + WN+ IPG+G++E++PYK+ TEAHKQR+ALIRK KK
Sbjct: 111 LEVKDVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIRKTTKK 161
>ZFIN|ZDB-GENE-031030-5 [details] [associations]
symbol:taf12 "TAF12 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0005669 "transcription factor TFIID complex" evidence=IEA]
InterPro:IPR003228 InterPro:IPR009072 Pfam:PF03847 ProDom:PD012998
ZFIN:ZDB-GENE-031030-5 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0005669 CTD:6883 eggNOG:COG5624
GeneTree:ENSGT00390000002144 HOGENOM:HOG000035092
HOVERGEN:HBG055174 KO:K03126 OMA:KMPGTPS OrthoDB:EOG4ZCT5X
EMBL:CR936200 EMBL:CR936484 EMBL:BC056696 EMBL:BC065878
EMBL:BC152198 IPI:IPI00489312 RefSeq:NP_938182.1
RefSeq:XP_003200277.1 UniGene:Dr.17679 SMR:Q6P013 STRING:Q6P013
Ensembl:ENSDART00000076222 Ensembl:ENSDART00000123639
Ensembl:ENSDART00000124208 GeneID:100535183 GeneID:386637
KEGG:dre:100535183 KEGG:dre:386637 InParanoid:Q6P013
NextBio:20813965 Uniprot:Q6P013
Length = 162
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 58/111 (52%), Positives = 83/111 (74%)
Query: 254 STPNDQILGKDKLDELMRQVDSTLQIDEEVYDTFSEIANDFVDNIVHRACQLAKHRGSST 313
S Q+L K KL +L+R++D Q+DE+V + +IA+DF++++V ACQLA+HR SST
Sbjct: 52 SPEGPQVLSKKKLQDLVREIDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSST 111
Query: 314 LDPKDLQFVLAKDWNISIPGYGTDELKPYKRPMATEAHKQRLALIRKHLKK 364
L+ KD+Q L + WN+ IPG+G+DE++PYK+ TEAHKQR+ALIRK KK
Sbjct: 112 LEVKDVQLHLERQWNMWIPGFGSDEIRPYKKACTTEAHKQRMALIRKTTKK 162
>UNIPROTKB|Q5ZKX3 [details] [associations]
symbol:TAF12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0000125 "PCAF complex" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR003228 InterPro:IPR009072
Pfam:PF03847 ProDom:PD012998 GO:GO:0051091 GO:GO:0003677
GO:GO:0003700 GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0006367 GO:GO:0043966 GO:GO:0004402 GO:GO:0005669
GO:GO:0030914 GO:GO:0033276 GO:GO:0000125 CTD:6883 eggNOG:COG5624
GeneTree:ENSGT00390000002144 HOGENOM:HOG000035092
HOVERGEN:HBG055174 KO:K03126 OMA:KMPGTPS OrthoDB:EOG4ZCT5X
EMBL:AADN02043979 EMBL:AJ719961 IPI:IPI00599624
RefSeq:NP_001026065.1 UniGene:Gga.3980 SMR:Q5ZKX3 STRING:Q5ZKX3
Ensembl:ENSGALT00000001463 Ensembl:ENSGALT00000041133 GeneID:419585
KEGG:gga:419585 InParanoid:Q5ZKX3 NextBio:20822616 Uniprot:Q5ZKX3
Length = 161
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 57/111 (51%), Positives = 85/111 (76%)
Query: 254 STPNDQILGKDKLDELMRQVDSTLQIDEEVYDTFSEIANDFVDNIVHRACQLAKHRGSST 313
S ++Q+L K KL +L+R+VD Q+DE+V + +IA+DF++++V ACQLA+HR S+T
Sbjct: 51 SPESNQVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSNT 110
Query: 314 LDPKDLQFVLAKDWNISIPGYGTDELKPYKRPMATEAHKQRLALIRKHLKK 364
L+ KD+Q L + WN+ IPG+G++E++PYK+ TEAHKQR+ALIRK KK
Sbjct: 111 LEVKDVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIRKTTKK 161
>UNIPROTKB|I3LKU2 [details] [associations]
symbol:TAF12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051091 "positive regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] [GO:0033276 "transcription
factor TFTC complex" evidence=IEA] [GO:0030914 "STAGA complex"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000125
"PCAF complex" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] InterPro:IPR003228
InterPro:IPR009072 Pfam:PF03847 ProDom:PD012998 GO:GO:0051091
GO:GO:0003677 GO:GO:0003700 GO:GO:0003713 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0006367 GO:GO:0043966 GO:GO:0004402
GO:GO:0005669 GO:GO:0030914 GO:GO:0033276 GO:GO:0000125
GeneTree:ENSGT00390000002144 OMA:KMPGTPS EMBL:FP565629
Ensembl:ENSSSCT00000027861 Uniprot:I3LKU2
Length = 161
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 57/111 (51%), Positives = 82/111 (73%)
Query: 254 STPNDQILGKDKLDELMRQVDSTLQIDEEVYDTFSEIANDFVDNIVHRACQLAKHRGSST 313
S N+Q+L K KL +L+R+VD Q+DE+V + +E+ + F ++V ACQLA+HR SST
Sbjct: 51 SPENNQVLTKKKLQDLVREVDPNEQLDEDVEELVNELMSFFCXSVVTAACQLARHRKSST 110
Query: 314 LDPKDLQFVLAKDWNISIPGYGTDELKPYKRPMATEAHKQRLALIRKHLKK 364
L+ KD+Q L + WN+ IPG+G++E++PYK+ TEAHKQR+ALIRK KK
Sbjct: 111 LEVKDVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIRKTTKK 161
>FB|FBgn0011290 [details] [associations]
symbol:Taf12 "TBP-associated factor 12" species:7227
"Drosophila melanogaster" [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0005669 "transcription factor TFIID
complex" evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0001129 "TBP-class protein binding RNA polymerase II
transcription factor activity involved in preinitiation complex
assembly" evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0000124 "SAGA
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003228 InterPro:IPR009072 Pfam:PF03847 ProDom:PD012998
EMBL:AE014297 GO:GO:0022008 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0000124 GO:GO:0005669 GO:GO:0001129 CTD:6883 eggNOG:COG5624
GeneTree:ENSGT00390000002144 KO:K03126 EMBL:U06450 EMBL:U06456
EMBL:S67741 EMBL:AY061435 PIR:A49453 PIR:S42222 RefSeq:NP_524320.1
RefSeq:NP_731616.1 RefSeq:NP_731617.2 UniGene:Dm.2806
ProteinModelPortal:P49905 SMR:P49905 DIP:DIP-779N IntAct:P49905
MINT:MINT-319520 STRING:P49905 PaxDb:P49905 PRIDE:P49905
EnsemblMetazoa:FBtr0082440 EnsemblMetazoa:FBtr0082442 GeneID:41406
KEGG:dme:Dmel_CG17358 FlyBase:FBgn0011290 InParanoid:P49905
OMA:VKSTSAF OrthoDB:EOG4DJHCX PhylomeDB:P49905 GenomeRNAi:41406
NextBio:823701 Bgee:P49905 GermOnline:CG17358 Uniprot:P49905
Length = 196
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 66/156 (42%), Positives = 95/156 (60%)
Query: 214 SDHSQVMN-SFSNSMEVDXXXXXXXXXXPAAQVMQKTNMPSS---TPNDQILGKDKLDEL 269
S HS + N S S+S P + + +N SS + N +L K +L EL
Sbjct: 41 SQHSPMTNNSNSSSQNGGPVSGLGTGTGPISGGSKSSNHTSSAAGSENTPMLTKPRLTEL 100
Query: 270 MRQVDSTLQIDEEVYDTFSEIANDFVDNIVHRACQLAKHRGSSTLDPKDLQFVLAKDWNI 329
+R+VD+T Q+DE+V + +I +DFV++ V AKHR S+ ++ +D+Q + +N+
Sbjct: 101 VREVDTTTQLDEDVEELLLQIIDDFVEDTVKSTSAFAKHRKSNKIEVRDVQLHFERKYNM 160
Query: 330 SIPGYGTDELKPYKRPMATEAHKQRLALIRKHLKKY 365
IPG+GTDEL+PYKR TEAHKQRLALIRK +KKY
Sbjct: 161 WIPGFGTDELRPYKRAAVTEAHKQRLALIRKTIKKY 196
>UNIPROTKB|G3MXQ4 [details] [associations]
symbol:G3MXQ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] InterPro:IPR003228 InterPro:IPR009072 Pfam:PF03847
ProDom:PD012998 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0005669 GeneTree:ENSGT00390000002144 EMBL:DAAA02038278
Ensembl:ENSBTAT00000037324 Uniprot:G3MXQ4
Length = 161
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 50/111 (45%), Positives = 79/111 (71%)
Query: 254 STPNDQILGKDKLDELMRQVDSTLQIDEEVYDTFSEIANDFVDNIVHRACQLAKHRGSST 313
S ++Q+L K KL +L+R+VD Q+DE+V + +IA+DF++++V ACQLA+HR SST
Sbjct: 51 SPESNQVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSST 110
Query: 314 LDPKDLQFVLAKDWNISIPGYGTDELKPYKRPMATEAHKQRLALIRKHLKK 364
L+ K++Q L + WN+ IPG+ ++E++PYK+ TEAH+ + LI K K
Sbjct: 111 LEVKNVQLHLERQWNMWIPGFSSEEIRPYKKACTTEAHRIKKLLIEKKQNK 161
>TAIR|locus:2100053 [details] [associations]
symbol:TAF12 "TBP-associated factor 12" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] InterPro:IPR003228 InterPro:IPR009072 Pfam:PF03847
ProDom:PD012998 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0003743
EMBL:AC010927 GO:GO:0005669 UniGene:At.23399 UniGene:At.39997
eggNOG:COG5624 KO:K03126 HSSP:Q16514 EMBL:AF344878 EMBL:AY463613
EMBL:AK221690 IPI:IPI00544681 RefSeq:NP_566367.1 UniGene:At.75030
ProteinModelPortal:Q9SR71 SMR:Q9SR71 IntAct:Q9SR71 STRING:Q9SR71
PaxDb:Q9SR71 PRIDE:Q9SR71 EnsemblPlants:AT3G10070.1 GeneID:820168
KEGG:ath:AT3G10070 TAIR:At3g10070 HOGENOM:HOG000153525
InParanoid:Q9SR71 OMA:ESITTFG PhylomeDB:Q9SR71
ProtClustDB:CLSN2716425 ArrayExpress:Q9SR71 Genevestigator:Q9SR71
Uniprot:Q9SR71
Length = 539
Score = 265 (98.3 bits), Expect = 3.3e-22, P = 3.3e-22
Identities = 50/114 (43%), Positives = 77/114 (67%)
Query: 248 KTNMPSSTPND-QILGKDKLDELMRQVDSTLQIDEEVYDTFSEIANDFVDNIVHRACQLA 306
KT + P+D +ILGK + EL++Q+D + ++D EV D S+IA DFV++I C LA
Sbjct: 386 KTVSAETEPSDDRILGKRSIHELLQQIDPSEKLDPEVEDILSDIAEDFVESITTFGCSLA 445
Query: 307 KHRGSSTLDPKDLQFVLAKDWNISIPGYGTDELKPYKRPMATEAHKQRLALIRK 360
KHR S L+ KD+ + ++WNI PG+ +DE K +++P+ T+ HK+RLA I+K
Sbjct: 446 KHRKSDILEAKDILLHVERNWNIRPPGFSSDEFKTFRKPLTTDIHKERLAAIKK 499
>DICTYBASE|DDB_G0274697 [details] [associations]
symbol:taf12 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA;ISS] [GO:0016568 "chromatin modification"
evidence=ISS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003228 InterPro:IPR009072 Pfam:PF03847 ProDom:PD012998
dictyBase:DDB_G0274697 GO:GO:0006355 GenomeReviews:CM000151_GR
GO:GO:0016568 EMBL:AAFI02000012 EMBL:AC123513 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0000124 GO:GO:0006367 GO:GO:0005669
eggNOG:COG5624 KO:K03126 RefSeq:XP_644047.2 HSSP:Q16514
ProteinModelPortal:Q555L9 SMR:Q555L9 STRING:Q555L9
EnsemblProtists:DDB0304680 GeneID:8619477 KEGG:ddi:DDB_G0274697
InParanoid:Q555L9 OMA:TNGINEA Uniprot:Q555L9
Length = 627
Score = 253 (94.1 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 52/118 (44%), Positives = 81/118 (68%)
Query: 249 TNMPSSTPND---QILGKDKLDELMRQVDSTLQIDEEVYDTFSEIANDFVDNIVHRACQL 305
+N P++ PN+ ++LGK KL EL++Q+ ++DE+ D S +A+DFV++ V AC L
Sbjct: 428 SNNPNN-PNNIEPEVLGKRKLIELLQQISPNEKMDEDAEDILSVLADDFVESTVAFACTL 486
Query: 306 AKHRGSSTLDPKDLQFVLAKDWNISIPGYGT-DELKPYKRPMATEAHKQRLALIRKHL 362
AKHR S+TL+ KDLQ L K+WNI +PG+G ++ K +K+P E HK R+A ++K +
Sbjct: 487 AKHRNSTTLEVKDLQCHLEKNWNIRVPGFGNVEQYKTFKKPHFPENHKLRVAAMKKSI 544
>TAIR|locus:2018861 [details] [associations]
symbol:EER4 "ENHANCED ETHYLENE RESPONSE 4" species:3702
"Arabidopsis thaliana" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA;ISS] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA;ISS] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=IMP] [GO:0009867 "jasmonic
acid mediated signaling pathway" evidence=IMP] [GO:0010104
"regulation of ethylene mediated signaling pathway" evidence=IMP]
[GO:0000394 "RNA splicing, via endonucleolytic cleavage and
ligation" evidence=RCA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=RCA] InterPro:IPR003228
InterPro:IPR009072 Pfam:PF03847 ProDom:PD012998 EMBL:CP002684
GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0009736 GO:GO:0003743 GO:GO:0009867 GO:GO:0005669
GO:GO:0010104 KO:K03126 HSSP:Q16514 EMBL:AY056144 EMBL:AY091423
EMBL:AY463614 IPI:IPI00528864 RefSeq:NP_564023.1 RefSeq:NP_849680.1
UniGene:At.22899 UniGene:At.41836 ProteinModelPortal:Q940A7
SMR:Q940A7 IntAct:Q940A7 STRING:Q940A7 PRIDE:Q940A7
EnsemblPlants:AT1G17440.1 EnsemblPlants:AT1G17440.2 GeneID:838316
KEGG:ath:AT1G17440 TAIR:At1g17440 HOGENOM:HOG000238463
InParanoid:Q940A7 OMA:SLAFMNP PhylomeDB:Q940A7
ProtClustDB:CLSN2687840 ArrayExpress:Q940A7 Genevestigator:Q940A7
Uniprot:Q940A7
Length = 683
Score = 232 (86.7 bits), Expect = 8.5e-17, P = 8.5e-17
Identities = 44/106 (41%), Positives = 74/106 (69%)
Query: 258 DQILGKDKLDELMRQVDSTLQIDEEVYDTFSEIANDFVDNIVHRACQLAKHRGSSTLDPK 317
+Q+LGK K+ +L+ QVD ++D +V D E+A+DF+D++ AC LAKHR SS L+PK
Sbjct: 525 NQLLGKRKIQDLVSQVDVHAKLDPDVEDLLLEVADDFIDSVTSFACSLAKHRKSSVLEPK 584
Query: 318 DLQFVLAKDWNISIPGYGTDELKPYKRPMATEAHKQRLALIRKHLK 363
D+ L K+ +++IPG+ +++ K + + T+ HK+RLA++R L+
Sbjct: 585 DILLHLEKNLHLTIPGFSSED-KRQTKTVPTDLHKKRLAMVRALLE 629
>WB|WBGene00006396 [details] [associations]
symbol:taf-12 species:6239 "Caenorhabditis elegans"
[GO:0005669 "transcription factor TFIID complex" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR003228 InterPro:IPR009072 Pfam:PF03847 ProDom:PD012998
GO:GO:0005634 GO:GO:0009792 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0040035 EMBL:AL132860 GO:GO:0005669
GeneTree:ENSGT00390000002144 GeneID:176617 KEGG:cel:CELE_Y56A3A.4
CTD:176617 HOGENOM:HOG000019961 RefSeq:NP_001255144.1
ProteinModelPortal:Q9U226 SMR:Q9U226 DIP:DIP-24869N IntAct:Q9U226
MINT:MINT-1062984 STRING:Q9U226 EnsemblMetazoa:Y56A3A.4a
UCSC:Y56A3A.4 WormBase:Y56A3A.4a InParanoid:Q9U226 OMA:PTEAHKQ
NextBio:893318 ArrayExpress:Q9U226 Uniprot:Q9U226
Length = 342
Score = 209 (78.6 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 44/123 (35%), Positives = 77/123 (62%)
Query: 251 MPSSTPNDQILGKDKLDELMRQVDSTLQIDEEVYDTFSEIANDFVDNIVHRACQLAKHRG 310
+P++ P I+ K KLD+LM+Q+ ST ++E V D E A+DFV +++ +AC++ K+R
Sbjct: 219 IPAAVPYGSIMEKSKLDDLMQQISSTTVLEENVKDVLVEYADDFVSSLIDKACKMIKNRE 278
Query: 311 SSTLDPKDLQFVLAKDWNISI-P-----GYG--TDELKPYKRPMA-TEAHKQRLALIRKH 361
++ +D++F+L +N+ + P +G T+ + K TEAHKQR+AL++K
Sbjct: 279 VKKIESRDIEFILKNVYNMPVVPRAASHNFGSQTEVIDLSKEKFVPTEAHKQRVALLKKQ 338
Query: 362 LKK 364
+KK
Sbjct: 339 IKK 341
Score = 44 (20.5 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 120 QMVQQVRRSHAYSKKPPVT-IDDLPVPQ 146
Q + QV+ + + PP I P+PQ
Sbjct: 180 QQIMQVQHQQQHQQPPPSQQIQQPPIPQ 207
Score = 40 (19.1 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 188 FFPPTLPKNEVL 199
F PPT P N V+
Sbjct: 6 FSPPTSPNNHVI 17
>UNIPROTKB|D4A8J1 [details] [associations]
symbol:D4A8J1 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR003228 InterPro:IPR009072
Pfam:PF03847 ProDom:PD012998 GO:GO:0051091 GO:GO:0003677
GO:GO:0003700 GO:GO:0003713 Gene3D:1.10.20.10 GO:GO:0006367
GO:GO:0043966 GO:GO:0004402 GO:GO:0005669 GO:GO:0030914
GO:GO:0033276 GO:GO:0000125 OrthoDB:EOG4ZCT5X IPI:IPI00780698
Ensembl:ENSRNOT00000057611 OMA:GSIANNA Uniprot:D4A8J1
Length = 152
Score = 201 (75.8 bits), Expect = 9.1e-16, P = 9.1e-16
Identities = 47/102 (46%), Positives = 65/102 (63%)
Query: 263 KDKLDELMRQVDSTLQIDEEVYDTFSEIANDFVDNIVHRACQLAKHRGSSTLDPKDLQFV 322
K K +L+R+VD Q+DE+V T +IA D++V ACQLA+ + S T + KD+Q
Sbjct: 56 KKKKTDLVRKVDPNQQLDEDVEKTLPQIA----DSVVTAACQLARPK-SGTGEVKDVQLH 110
Query: 323 LAKDWNISIPGYGTDELKPYKRPMATEAHKQRLALIRKHLKK 364
WN+ IPG G++E+ P K +TEAHKQR+ LIRK KK
Sbjct: 111 PDCLWNMWIPGLGSEEIPPSKNVCSTEAHKQRMVLIRKTTKK 152
>UNIPROTKB|J9NXV6 [details] [associations]
symbol:J9NXV6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] InterPro:IPR003228 InterPro:IPR009072 Pfam:PF03847
ProDom:PD012998 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0005669 GeneTree:ENSGT00390000002144 EMBL:AAEX03008539
Ensembl:ENSCAFT00000005499 OMA:NFSSIKL Uniprot:J9NXV6
Length = 161
Score = 195 (73.7 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 51/145 (35%), Positives = 79/145 (54%)
Query: 204 KDLSMLNSVDSDHSQVMNSFSNSMEVDXXXXXXXXXXPAAQVMQKTNMPSST----P--- 256
+DL L + S Q+MN F S ++ PA+ Q + S+T P
Sbjct: 17 QDLDKLYELKSKARQIMNQFGPSALINLSNFSSIKLEPASTPPQGSMANSTTVVKVPGTP 76
Query: 257 ---------NDQILGKDKLDELMRQVDSTLQIDEEVYDTFSEIANDFVDNIVHRACQLAK 307
N+Q+L K KL +L+R+VD Q++E+V + +IA+DF++++V ACQLA+
Sbjct: 77 GTGGRLSPENNQVLTKKKLQDLVREVDPNEQLNEDVEEMLLQIADDFIESVVTAACQLAR 136
Query: 308 HRGSSTLDPKDLQFVLAKDWNISIP 332
HR SSTL+ KD+Q L + N+ IP
Sbjct: 137 HRKSSTLEVKDVQLHLERQRNMWIP 161
>POMBASE|SPAC15A10.02 [details] [associations]
symbol:taf12 "transcription factor TFIID complex
subunit A/ SAGA complex subunit Taf12" species:4896
"Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0000991 "core RNA polymerase II binding transcription factor
activity" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005669 "transcription factor TFIID complex" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=IC] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] InterPro:IPR003228 InterPro:IPR009072 Pfam:PF03847
ProDom:PD012998 PomBase:SPAC15A10.02 EMBL:CU329670 GO:GO:0006355
GenomeReviews:CU329670_GR GO:GO:0016573 GO:GO:0006338 GO:GO:0000790
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0000124 GO:GO:0006367
GO:GO:0000991 GO:GO:0005669 eggNOG:COG5624 KO:K03126 HSSP:Q16514
PIR:T37702 RefSeq:NP_594289.1 ProteinModelPortal:O13722 SMR:O13722
STRING:O13722 EnsemblFungi:SPAC15A10.02.1 GeneID:2542785
KEGG:spo:SPAC15A10.02 OrthoDB:EOG45TGXB NextBio:20803829
Uniprot:O13722
Length = 450
Score = 212 (79.7 bits), Expect = 8.2e-15, P = 8.2e-15
Identities = 39/98 (39%), Positives = 71/98 (72%)
Query: 258 DQILGKDKLDELMRQVDSTLQIDEEVYDTFSEIANDFVDNIVHRACQLAKHRGSSTLDPK 317
+++L K KL +L++Q+DS +I+ EV + EIA++FV+++ + AC+LAKHR S TLD +
Sbjct: 340 NRLLSKRKLHDLLQQIDSEEKIEPEVEELLLEIADEFVESVTNFACRLAKHRKSDTLDVR 399
Query: 318 DLQFVLAKDWNISIPGYGTDEL-KPYKRPMATEAHKQR 354
D+Q L ++WNI +PG+ +D++ K ++ T +++Q+
Sbjct: 400 DVQLHLERNWNIRLPGFASDDIVKSARKTGPTPSYQQK 437
>UNIPROTKB|G4NDQ9 [details] [associations]
symbol:MGG_00885 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR003228 InterPro:IPR009072 Pfam:PF03847
ProDom:PD012998 EMBL:CM001235 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0005669 KO:K03126 RefSeq:XP_003718081.1
ProteinModelPortal:G4NDQ9 EnsemblFungi:MGG_00885T0 GeneID:2674565
KEGG:mgr:MGG_00885 Uniprot:G4NDQ9
Length = 814
Score = 200 (75.5 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 43/110 (39%), Positives = 68/110 (61%)
Query: 258 DQILGKDKLDELMRQV--------DSTLQIDEEVYDTFSEIANDFVDNIVHRACQLAKHR 309
D++L K KLDEL+RQV D L + EV ++ +A+ FVDN++H AC+ AK R
Sbjct: 695 DRVLSKKKLDELVRQVCGGTAEGLDGNL-LTPEVEESVLTLADSFVDNVLHSACRNAKER 753
Query: 310 GSSTLDPKDLQFVLAKDWNISIPGYGTDELKPYKRPMATEAHKQRLALIR 359
GS L+ +D+Q VL + +NI IPGY DEL+ ++ + A +++ ++
Sbjct: 754 GSKVLEIRDIQLVLERTYNIRIPGYSADELRTVRKVQPSAAWISKMSAVQ 803
>CGD|CAL0005789 [details] [associations]
symbol:orf19.470 species:5476 "Candida albicans" [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IEA] [GO:0000124 "SAGA
complex" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0051123 "RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] InterPro:IPR003228
InterPro:IPR009072 Pfam:PF03847 ProDom:PD012998 CGD:CAL0005789
GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AACQ01000055
GO:GO:0005669 eggNOG:COG5624 KO:K03126 RefSeq:XP_717334.1
ProteinModelPortal:Q5A6T4 STRING:Q5A6T4 GeneID:3640954
KEGG:cal:CaO19.470 Uniprot:Q5A6T4
Length = 750
Score = 200 (75.5 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 42/170 (24%), Positives = 86/170 (50%)
Query: 191 PTLPKNEVLSFPAKDLSMLNSVDSDHSQVMNSFSNSMEVDXXXXXXXXXXPAAQVMQKTN 250
P+LP + ++ ++ NS++ + +N M + P + T
Sbjct: 568 PSLPISSSINVKQPTITTFNSINDTRPSLTGGAANPMSI-LLDTPAITKLPTFDIEGDTG 626
Query: 251 MPSSTPNDQILGKDKLDELMRQV-----DSTLQIDEEVYDTFSEIANDFVDNIVHRACQL 305
+ S+ + ++L K KL +L+ + D ID V + ++A++F+ ++ AC+L
Sbjct: 627 VIDSSTSGRVLNKRKLGDLINTIGVDEGDGKTSIDGNVEEFLLDLADEFIHSVTSFACRL 686
Query: 306 AKHRGSSTLDPKDLQFVLAKDWNISIPGYGTDELKPYKRPMATEAHKQRL 355
AKHR +++ +D+Q L K+WNI IPGY DE++ ++ + ++ Q++
Sbjct: 687 AKHRKVDSIEARDVQLHLDKNWNIKIPGYAMDEIRNTRKIQPSNSYSQKV 736
Score = 39 (18.8 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 26 QSVPTI-PQVEQNITYRIQN 44
+S PT PQV+QN+ QN
Sbjct: 190 KSNPTPQPQVQQNVQQMNQN 209
>SGD|S000002552 [details] [associations]
symbol:TAF12 "Subunit (61/68 kDa) of TFIID and SAGA
complexes" species:4932 "Saccharomyces cerevisiae" [GO:0017025
"TBP-class protein binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0051123 "RNA polymerase II transcriptional
preinitiation complex assembly" evidence=IMP] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IDA;IPI] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005669 "transcription factor
TFIID complex" evidence=IEA;IDA] [GO:0016573 "histone acetylation"
evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IDA;IMP] [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0001075 "RNA polymerase II core promoter sequence-specific DNA
binding transcription factor activity involved in preinitiation
complex assembly" evidence=IC] [GO:0032947 "protein complex
scaffold" evidence=IMP] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] InterPro:IPR003228 InterPro:IPR009072 Pfam:PF03847
ProDom:PD012998 SGD:S000002552 GO:GO:0006355 GO:GO:0016573
EMBL:BK006938 GO:GO:0003682 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0000124 GO:GO:0046695 GO:GO:0032947 GO:GO:0001102
GO:GO:0017025 EMBL:Z50046 GO:GO:0005669 GO:GO:0051123
eggNOG:COG5624 GeneTree:ENSGT00390000002144 KO:K03126
OrthoDB:EOG45TGXB PIR:S57972 RefSeq:NP_010429.1
ProteinModelPortal:Q03761 SMR:Q03761 DIP:DIP-1302N IntAct:Q03761
MINT:MINT-408447 STRING:Q03761 PaxDb:Q03761 PeptideAtlas:Q03761
EnsemblFungi:YDR145W GeneID:851723 KEGG:sce:YDR145W CYGD:YDR145w
HOGENOM:HOG000141888 OMA:YRSNRPT NextBio:969433
Genevestigator:Q03761 GermOnline:YDR145W Uniprot:Q03761
Length = 539
Score = 188 (71.2 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 39/112 (34%), Positives = 65/112 (58%)
Query: 252 PSSTPNDQILGKDKLDELMRQV-----DSTLQIDEEVYDTFSEIANDFVDNIVHRACQLA 306
P +++ K KL EL++ V D ID +V + ++A+DFV N+ +C+LA
Sbjct: 406 PYEMDTQRVMSKRKLRELVKTVGIDEGDGETVIDGDVEELLLDLADDFVTNVTAFSCRLA 465
Query: 307 KHRGSSTLDPKDLQFVLAKDWNISIPGYGTDELKPYKRPMATEAHKQRLALI 358
KHR S L+ +D+Q L ++WNI IPGY DE++ ++ ++ + Q+L I
Sbjct: 466 KHRKSDNLEARDIQLHLERNWNIRIPGYSADEIRSTRKWNPSQNYNQKLQSI 517
>ASPGD|ASPL0000036544 [details] [associations]
symbol:AN2769 species:162425 "Emericella nidulans"
[GO:0005669 "transcription factor TFIID complex" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] InterPro:IPR003228
InterPro:IPR009072 Pfam:PF03847 ProDom:PD012998 EMBL:BN001306
GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0003743
EMBL:AACD01000049 GO:GO:0005669 eggNOG:COG5624 KO:K03126
OrthoDB:EOG45TGXB RefSeq:XP_660373.1 ProteinModelPortal:Q5B9L1
SMR:Q5B9L1 EnsemblFungi:CADANIAT00010338 GeneID:2873945
KEGG:ani:AN2769.2 HOGENOM:HOG000193877 OMA:YNIRIPG Uniprot:Q5B9L1
Length = 588
Score = 184 (69.8 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 37/104 (35%), Positives = 68/104 (65%)
Query: 259 QILGKDKLDELMRQVDSTLQ---IDEEVYDTFSEIANDFVDNIVHRACQLAKHRGSSTLD 315
++L K LD L+RQV + + + + ++A+DFVD+++ AC+LAK R SS+L+
Sbjct: 475 RVLSKKMLDVLVRQVTGGGEGEGLTPDAEEFMLQMADDFVDDVITAACRLAKLRHSSSLE 534
Query: 316 PKDLQFVLAKDWNISIPGYGTDELKPYKRPMATEAHKQRLALIR 359
+D+Q VL +++N+ I G+ TD+L+ K+P T+ Q+++ I+
Sbjct: 535 IRDIQLVLERNYNMRISGFSTDDLRTVKKPQPTQGWTQKMSAIQ 578
>FB|FBgn0040793 [details] [associations]
symbol:CG7630 species:7227 "Drosophila melanogaster"
[GO:0005811 "lipid particle" evidence=IDA] EMBL:AE014296
GO:GO:0005811 GeneTree:ENSGT00690000103591 EMBL:AY113572
RefSeq:NP_652413.1 UniGene:Dm.20566 STRING:Q9VVG5
EnsemblMetazoa:FBtr0075217 GeneID:50266 KEGG:dme:Dmel_CG7630
UCSC:CG7630-RA FlyBase:FBgn0040793 eggNOG:NOG127720
InParanoid:Q9VVG5 OMA:HSTMNDL OrthoDB:EOG42V703 ChiTaRS:CG7630
GenomeRNAi:50266 NextBio:840594 Uniprot:Q9VVG5
Length = 90
Score = 140 (54.3 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 135 PPVTIDDLPVPQGSWKAHYDKQNTKYNIQLLVGTVSLAATIGYLAVSDVFIWNFFPP 191
P T++DLPVP G WK + ++N KYN L+ G + LA TIG++ S + +N++ P
Sbjct: 30 PHSTMNDLPVPAGDWKEQHSQKNAKYNAALITGILVLAGTIGFVKSSGIIHFNYYAP 86
>FB|FBgn0031623 [details] [associations]
symbol:Taf12L "TBP-associated factor 30kD subunit alpha-2"
species:7227 "Drosophila melanogaster" [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISS]
[GO:0005669 "transcription factor TFIID complex" evidence=ISS]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0007140 "male
meiosis" evidence=NAS] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] [GO:0001673 "male germ cell nucleus"
evidence=IDA] InterPro:IPR003228 InterPro:IPR009072 Pfam:PF03847
ProDom:PD012998 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0001673
GO:GO:0006367 GO:GO:0005669 EMBL:AY752880 ProteinModelPortal:Q5UEC2
SMR:Q5UEC2 STRING:Q5UEC2 PRIDE:Q5UEC2 FlyBase:FBgn0031623
InParanoid:Q5UEC2 OrthoDB:EOG4X69RT ArrayExpress:Q5UEC2 Bgee:Q5UEC2
Uniprot:Q5UEC2
Length = 138
Score = 128 (50.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 34/128 (26%), Positives = 66/128 (51%)
Query: 209 LNSVDSDHSQVMNSFSN----SMEVDXXXXXXXXXXPAAQVMQKTNMPSSTPNDQILGKD 264
LN DSD S S S+ S D A V++ ++P + + I+ K
Sbjct: 12 LNFDDSDKSSDNESHSSTRSSSRSSDTSIDTSSVEKEPASVIESQSVPGGSYD--IISKT 69
Query: 265 KLDELMRQVDSTLQIDEEVYDTFSEIANDFVDNIVHRACQLAKHRGSSTLDPKDLQFVLA 324
+ + ++++D+ +D++ D + IA+ FV+++ R +LAK+R S + DL+F+L
Sbjct: 70 NMLQFVQKIDANSSLDDQGCDMMARIADAFVNDVSMRMVKLAKYR-KSDVSVLDLKFILK 128
Query: 325 KDWNISIP 332
+++N+ P
Sbjct: 129 REFNMEFP 136
>WB|WBGene00000263 [details] [associations]
symbol:F23H11.5 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0000003 EMBL:FO081212 PIR:T34068
RefSeq:NP_497291.1 DIP:DIP-26925N MINT:MINT-1076198 STRING:O01917
PaxDb:O01917 EnsemblMetazoa:F23H11.5.1 EnsemblMetazoa:F23H11.5.2
GeneID:175254 KEGG:cel:CELE_F23H11.5 UCSC:F23H11.5.2 CTD:175254
WormBase:F23H11.5 eggNOG:NOG242054 HOGENOM:HOG000020580
InParanoid:O01917 OMA:ATAIYTN NextBio:887424 Uniprot:O01917
Length = 96
Score = 82 (33.9 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 21/70 (30%), Positives = 33/70 (47%)
Query: 129 HAYSKKPPVTIDDLPVPQGSWKAHYDKQNTKYNIQLLVGTVSLAATIGYLAVSDVFIWN- 187
H + PP T D +PVP S+K Y + K+N L V V A++ +++F +
Sbjct: 25 HVANPGPPCTFDLMPVPFQSYKKVYGELQGKFNTYLAVSAVFFASSFATAIYTNLFAFEE 84
Query: 188 -FFPPTLPKN 196
PP +N
Sbjct: 85 AIRPPQSYRN 94
Score = 38 (18.4 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 71 LNFMSFN----LCQHSLKAHSHGH 90
+N +FN L + + K H HGH
Sbjct: 1 MNRTAFNRFLALSRFAQKRHGHGH 24
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.132 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 365 355 0.00080 117 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 24
No. of states in DFA: 615 (65 KB)
Total size of DFA: 243 KB (2131 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.49u 0.09s 29.58t Elapsed: 00:00:08
Total cpu time: 29.49u 0.09s 29.58t Elapsed: 00:00:08
Start: Thu Aug 15 11:05:43 2013 End: Thu Aug 15 11:05:51 2013