BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14445
(252 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P25788|PSA3_HUMAN Proteasome subunit alpha type-3 OS=Homo sapiens GN=PSMA3 PE=1 SV=2
Length = 255
Score = 347 bits (889), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 164/252 (65%), Positives = 202/252 (80%), Gaps = 1/252 (0%)
Query: 1 MSSIGAGYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYD 60
MSSIG GYDLSAS FSPDGRVFQVEYA KAVENSSTAIG+R KDGVV VEKLVLSKLY+
Sbjct: 1 MSSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYE 60
Query: 61 PGANKRIFHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYV 119
G+NKR+F+VD H+G+ +GL++ R LA+ A+ EAS +RS +G NIPL L +RV+MYV
Sbjct: 61 EGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYV 120
Query: 120 HAYTLYSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEKL 179
HAYTLYS VRPFG S +L S+ DG LY++DPSGVS+GY+GCAIGKA+Q AKTEIEKL
Sbjct: 121 HAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKL 180
Query: 180 KLSTLSMEQLAKEAARIIYVVHDELKDKHFELELAWVGEKTNGKFEMVPQSFLEECENYA 239
++ ++ + KE A+IIY+VHDE+KDK FELEL+WVGE TNG+ E+VP+ EE E YA
Sbjct: 181 QMKEMTCRDIVKEVAKIIYIVHDEVKDKAFELELSWVGELTNGRHEIVPKDIREEAEKYA 240
Query: 240 KASLQDSDSDND 251
K SL++ D +D
Sbjct: 241 KESLKEEDESDD 252
>sp|Q58DU5|PSA3_BOVIN Proteasome subunit alpha type-3 OS=Bos taurus GN=PSMA3 PE=1 SV=3
Length = 255
Score = 346 bits (888), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 164/252 (65%), Positives = 202/252 (80%), Gaps = 1/252 (0%)
Query: 1 MSSIGAGYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYD 60
MSSIG GYDLSAS FSPDGRVFQVEYA KAVENSSTAIG+R KDGVV VEKLVLSKLY+
Sbjct: 1 MSSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYE 60
Query: 61 PGANKRIFHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYV 119
G+NKR+F+VD H+G+ +GL++ R LA+ A+ EAS +RS +G NIPL L +RV+MYV
Sbjct: 61 EGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYV 120
Query: 120 HAYTLYSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEKL 179
HAYTLYS VRPFG S +L S+ DG LY++DPSGVS+GY+GCAIGKA+Q AKTEIEKL
Sbjct: 121 HAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKL 180
Query: 180 KLSTLSMEQLAKEAARIIYVVHDELKDKHFELELAWVGEKTNGKFEMVPQSFLEECENYA 239
++ ++ + KE A+IIY+VHDE+KDK FELEL+WVGE TNG+ E+VP+ EE E YA
Sbjct: 181 QMKEMTCRDVVKEVAKIIYIVHDEVKDKAFELELSWVGEITNGRHEIVPKDVREEAEKYA 240
Query: 240 KASLQDSDSDND 251
K SL++ D +D
Sbjct: 241 KESLKEEDESDD 252
>sp|O70435|PSA3_MOUSE Proteasome subunit alpha type-3 OS=Mus musculus GN=Psma3 PE=1 SV=3
Length = 255
Score = 344 bits (883), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 163/252 (64%), Positives = 201/252 (79%), Gaps = 1/252 (0%)
Query: 1 MSSIGAGYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYD 60
MSSIG GYDLSAS FSPDGRVFQVEYA KAVENSSTAIG+R KDGVV VEKLVLSKLY+
Sbjct: 1 MSSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYE 60
Query: 61 PGANKRIFHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYV 119
G+NKR+F+VD H+G+ +GL++ R LA+ A+ EAS +RS +G NIPL L +RV+MYV
Sbjct: 61 EGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYV 120
Query: 120 HAYTLYSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEKL 179
HAYTLYS VRPFG S +L S+ DG LY++DPSGVS+GY+GCAIGKA+Q AKTEIEKL
Sbjct: 121 HAYTLYSAVRPFGCSFMLGSYSANDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKL 180
Query: 180 KLSTLSMEQLAKEAARIIYVVHDELKDKHFELELAWVGEKTNGKFEMVPQSFLEECENYA 239
++ ++ + KE A+IIY+VHDE+KDK FELEL+WVGE T G+ E+VP+ EE E YA
Sbjct: 181 QMKEMTCRDVVKEVAKIIYIVHDEVKDKAFELELSWVGELTKGRHEIVPKDIREEAEKYA 240
Query: 240 KASLQDSDSDND 251
K SL++ D +D
Sbjct: 241 KESLKEEDESDD 252
>sp|P18422|PSA3_RAT Proteasome subunit alpha type-3 OS=Rattus norvegicus GN=Psma3 PE=1
SV=3
Length = 255
Score = 343 bits (881), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 163/252 (64%), Positives = 201/252 (79%), Gaps = 1/252 (0%)
Query: 1 MSSIGAGYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYD 60
MSSIG GYDLSAS FSPDGRVFQVEYA KAVENSSTAIG+R KDGVV VEKLVLSKLY+
Sbjct: 1 MSSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYE 60
Query: 61 PGANKRIFHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYV 119
G+NKR+F+VD H+G+ +GL++ R LA+ A+ EAS +RS +G NIPL L +RV+MYV
Sbjct: 61 EGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYV 120
Query: 120 HAYTLYSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEKL 179
HAYTLYS VRPFG S +L S+ DG LY++DPSGVS+GY+GCAIGKA+Q AKTEIEKL
Sbjct: 121 HAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKL 180
Query: 180 KLSTLSMEQLAKEAARIIYVVHDELKDKHFELELAWVGEKTNGKFEMVPQSFLEECENYA 239
++ ++ + KE A+IIY+VHDE+KDK FELEL+WVGE T G+ E+VP+ EE E YA
Sbjct: 181 QMKEMTCRDVVKEVAKIIYIVHDEVKDKAFELELSWVGELTKGRHEIVPKDVREEAEKYA 240
Query: 240 KASLQDSDSDND 251
K SL++ D +D
Sbjct: 241 KESLKEEDESDD 252
>sp|P90513|PSA3_ACACA Proteasome subunit alpha type-3 (Fragment) OS=Acanthamoeba
castellanii PE=2 SV=1
Length = 252
Score = 286 bits (732), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 143/242 (59%), Positives = 179/242 (73%), Gaps = 2/242 (0%)
Query: 3 SIGAGYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPG 62
SIG GYDLS++ FSPDGRVFQVEYA KAV+NS TA+GLR KDGVV+AVEKL++SK+ P
Sbjct: 1 SIGTGYDLSSTTFSPDGRVFQVEYAAKAVDNSGTALGLRVKDGVVLAVEKLLVSKMLVPN 60
Query: 63 ANKRIFHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHA 121
N+RI VD H GL SGL++ GRQL + EA+ YR YG +I +LNER+S +V
Sbjct: 61 TNRRIHTVDRHCGLAMSGLVADGRQLVSRGRAEATSYREFYGTDISGKVLNERLSNFVQL 120
Query: 122 YTLYSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEKLKL 181
Y+LY VRPFG S++L DK +GP LY+++PSG+S GYFG AIGK + AKTEIEKLKL
Sbjct: 121 YSLYGSVRPFGTSVILGCVDK-NGPQLYMIEPSGISWGYFGVAIGKGARAAKTEIEKLKL 179
Query: 182 STLSMEQLAKEAARIIYVVHDELKDKHFELELAWVGEKTNGKFEMVPQSFLEECENYAKA 241
S ++ + KEAA+IIY VHD+ KDK FELEL+WV E+T + VP+ LEE E YAK
Sbjct: 180 SEMTAREAIKEAAKIIYSVHDDAKDKAFELELSWVCEETGNLHKFVPKDLLEEAEKYAKQ 239
Query: 242 SL 243
+L
Sbjct: 240 AL 241
>sp|Q9V5C6|PSA3_DROME Proteasome subunit alpha type-3 OS=Drosophila melanogaster
GN=Prosalpha7 PE=1 SV=1
Length = 253
Score = 278 bits (710), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 139/252 (55%), Positives = 179/252 (71%), Gaps = 2/252 (0%)
Query: 1 MSSIGAGYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYD 60
MS+IG GYDLSASQFSPDGRVFQ++YA KAVE S T IG+RGKD VV+AVEK++ SKLY+
Sbjct: 1 MSTIGTGYDLSASQFSPDGRVFQIDYASKAVEKSGTVIGIRGKDAVVLAVEKIITSKLYE 60
Query: 61 PGANKRIFHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYV 119
P A RIF ++ +IG+ +GL++ G +A+ A+ EA+ YR ++ IPL L RV+ YV
Sbjct: 61 PDAGGRIFTIEKNIGMAVAGLVADGNFVADIARQEAANYRQQFEQAIPLKHLCHRVAGYV 120
Query: 120 HAYTLYSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEKL 179
HAYTLYS VRPFG S++LAS D+ +GP LY ++PSG S GYF CA GKAKQ AKTE+EKL
Sbjct: 121 HAYTLYSAVRPFGLSIILASWDEVEGPQLYKIEPSGSSFGYFACASGKAKQLAKTEMEKL 180
Query: 180 KLSTLSMEQLAKEAARIIYVVHDELKDKHFELELAWVGEKTNGKFEMVPQSFLEECENYA 239
K+ + ++L + A IIY VHDELKDK F E+ VG T G + P E+
Sbjct: 181 KMD-MRTDELVESAGEIIYKVHDELKDKDFRFEMGLVGRVTGGLHLINPSELTEKARKAG 239
Query: 240 KASLQDSDSDND 251
A+ +D DSDN+
Sbjct: 240 DAANKDEDSDNE 251
>sp|O23715|PSA3_ARATH Proteasome subunit alpha type-3 OS=Arabidopsis thaliana GN=PAG1
PE=1 SV=2
Length = 249
Score = 276 bits (705), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 132/250 (52%), Positives = 181/250 (72%), Gaps = 2/250 (0%)
Query: 1 MSSIGAGYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYD 60
MSSIG GYDLS + FSPDGRVFQ+EYA KAV+NS T +G++ KDG+V+ VEKL+ SK+
Sbjct: 1 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVVGIKCKDGIVMGVEKLIASKMML 60
Query: 61 PGANKRIFHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYV 119
PG+N+RI V H G+ +GL + GRQ+ AK+EA Y S YG +P+ L+ERV+ YV
Sbjct: 61 PGSNRRIHSVHRHAGMAVAGLAADGRQIVARAKSEARSYESVYGDAVPVKELSERVASYV 120
Query: 120 HAYTLYSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEKL 179
H TLY +RPFG ++L +D+ DGP LY+++PSG+S+ YFG AIGK KQ AKTEIEKL
Sbjct: 121 HLCTLYWWLRPFGCGVILGGYDR-DGPQLYMIEPSGISYRYFGAAIGKGKQAAKTEIEKL 179
Query: 180 KLSTLSMEQLAKEAARIIYVVHDELKDKHFELELAWVGEKTNGKFEMVPQSFLEECENYA 239
LS ++ ++ E A+IIY +HDE KDK FELE++W+ E++ + + VP LEE + A
Sbjct: 180 NLSEMTCKEGVIEVAKIIYKLHDEAKDKAFELEMSWICEESKREHQKVPDDLLEEAKTAA 239
Query: 240 KASLQDSDSD 249
K +L++ D+D
Sbjct: 240 KTALEEMDAD 249
>sp|O24362|PSA3_SPIOL Proteasome subunit alpha type-3 OS=Spinacia oleracea GN=PAG1 PE=2
SV=1
Length = 249
Score = 270 bits (689), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 133/250 (53%), Positives = 183/250 (73%), Gaps = 2/250 (0%)
Query: 1 MSSIGAGYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYD 60
MSSIG GYDLS + FSPDGRVFQ+EYA KAV+NS TA+G++ KDG+V+ VEKL+ SK+
Sbjct: 1 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTAVGIKCKDGIVLGVEKLIQSKMML 60
Query: 61 PGANKRIFHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYV 119
PG+N+RI V H G+ +GL + GRQ+ AK+EA+ Y S YG +P+ L +RV+ YV
Sbjct: 61 PGSNRRIHSVHRHSGMAVAGLAADGRQIVARAKSEATNYESVYGEAVPVKELADRVASYV 120
Query: 120 HAYTLYSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEKL 179
H TLY +RPFG ++L +D+ DGP LY+V+PSG+S+ YFG AIGK KQ AKTEIEKL
Sbjct: 121 HLCTLYWWLRPFGCGVILGGYDR-DGPQLYMVEPSGISYRYFGAAIGKGKQAAKTEIEKL 179
Query: 180 KLSTLSMEQLAKEAARIIYVVHDELKDKHFELELAWVGEKTNGKFEMVPQSFLEECENYA 239
KLS ++ + E A+IIY VHDE KDK FELE++W+ +++ + + VP + L+E + A
Sbjct: 180 KLSEMTCREGIIEVAKIIYKVHDEAKDKAFELEMSWICDESKREHQKVPDNLLQEAKAAA 239
Query: 240 KASLQDSDSD 249
A+L++ D+D
Sbjct: 240 TAALEEMDAD 249
>sp|Q27563|PSA3_DICDI Proteasome subunit alpha type-3 OS=Dictyostelium discoideum
GN=psmA3 PE=2 SV=2
Length = 248
Score = 269 bits (687), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 125/248 (50%), Positives = 179/248 (72%), Gaps = 2/248 (0%)
Query: 1 MSSIGAGYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYD 60
MSS+G+GYDL S +SPDG++FQV+YA KAVENS T + ++ KDGVV+ VEKLV SK+
Sbjct: 1 MSSVGSGYDLYVSTYSPDGKLFQVDYANKAVENSGTLVAIKAKDGVVLGVEKLVPSKMLC 60
Query: 61 PGANKRIFHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYV 119
G+N+R+ H+DTH+G+ +G ++ RQL A++EA Y+S YG IP+ +L++R++ Y
Sbjct: 61 SGSNRRVHHIDTHVGVAIAGFLADARQLITRARSEAKNYKSTYGQPIPIKVLSQRIASYN 120
Query: 120 HAYTLYSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEKL 179
H +TLY VRPFG S+ + D+ GP L++V+PSG GYFG ++GK KQ AK E+EK+
Sbjct: 121 HMHTLYGSVRPFGCSIAITGIDQY-GPQLFLVEPSGSCVGYFGASLGKGKQAAKNELEKI 179
Query: 180 KLSTLSMEQLAKEAARIIYVVHDELKDKHFELELAWVGEKTNGKFEMVPQSFLEECENYA 239
K S ++ + KE +RIIY VHDE+KDK FELEL W+ +TN ++VP+ +E E YA
Sbjct: 180 KFSEMTCREAIKEVSRIIYSVHDEVKDKDFELELGWISTETNNVHQIVPKELHDEAEAYA 239
Query: 240 KASLQDSD 247
K SL+D++
Sbjct: 240 KQSLEDAN 247
>sp|Q9LSU0|PSA3_ORYSJ Proteasome subunit alpha type-3 OS=Oryza sativa subsp. japonica
GN=PAG1 PE=2 SV=1
Length = 249
Score = 268 bits (686), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/250 (53%), Positives = 180/250 (72%), Gaps = 2/250 (0%)
Query: 1 MSSIGAGYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYD 60
MSSIG GYDLS + FSPDGRVFQVEYA KAV+NS T +G++ KDG+V+ VEKLV SK+
Sbjct: 1 MSSIGTGYDLSVTTFSPDGRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMML 60
Query: 61 PGANKRIFHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYV 119
G+N+RI V H GL +GL + GRQ+ AK+EA+ Y YG I + L +RV+ YV
Sbjct: 61 EGSNRRIHSVHWHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASYV 120
Query: 120 HAYTLYSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEKL 179
H TLY +RPFG ++L +D+ DGP LY+++PSGVS+ YFG A+GK +Q AKTEIEKL
Sbjct: 121 HLCTLYWWLRPFGCGVILGGYDR-DGPQLYMIEPSGVSYKYFGAALGKGRQAAKTEIEKL 179
Query: 180 KLSTLSMEQLAKEAARIIYVVHDELKDKHFELELAWVGEKTNGKFEMVPQSFLEECENYA 239
KLS L+ + E A+IIY VHDE KDK FELEL+W+ +++N + + VP LE+ + A
Sbjct: 180 KLSELTCREGIVEVAKIIYGVHDEAKDKAFELELSWICDESNRQHQKVPADLLEQAKVAA 239
Query: 240 KASLQDSDSD 249
+A+L++ D+D
Sbjct: 240 QAALEEMDAD 249
>sp|O59770|PSA7_SCHPO Probable proteasome subunit alpha type-7 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=pre10 PE=1 SV=1
Length = 253
Score = 241 bits (616), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 121/241 (50%), Positives = 163/241 (67%), Gaps = 3/241 (1%)
Query: 1 MSSIGAGYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYD 60
MSSIG GYDL FSPDGR+FQ EYA KAVEN+ST IG++ +DGV++A+EK+V SKL
Sbjct: 1 MSSIGTGYDLGLF-FSPDGRLFQAEYAYKAVENASTCIGIKCEDGVILALEKVVTSKLLK 59
Query: 61 PGANKRIFHVDTHIGLGS-GLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYV 119
P N RI VD HIG+ + G I G+ + + A+ EA+ +R YG IP ++ +R+ YV
Sbjct: 60 PRVNNRIGSVDRHIGIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYV 119
Query: 120 HAYTLYSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEKL 179
+T YS VRPFG +A++D ++GP LY+V+P+GV GY G A GK +Q A+ E+EKL
Sbjct: 120 QLFTCYSSVRPFGVMSFVATYD-SEGPHLYMVEPNGVYWGYNGAAAGKGRQVARNELEKL 178
Query: 180 KLSTLSMEQLAKEAARIIYVVHDELKDKHFELELAWVGEKTNGKFEMVPQSFLEECENYA 239
S+L M+ KEAARI+Y HDE +K E+E+ WVG +TNG VP L+E E YA
Sbjct: 179 NFSSLKMKDAVKEAARILYATHDEENNKEHEIEMTWVGVETNGIHTPVPDELLQEAEAYA 238
Query: 240 K 240
+
Sbjct: 239 R 239
>sp|Q09583|PSA3_CAEEL Proteasome subunit alpha type-3 OS=Caenorhabditis elegans GN=pas-7
PE=1 SV=3
Length = 250
Score = 241 bits (615), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 122/251 (48%), Positives = 168/251 (66%), Gaps = 2/251 (0%)
Query: 1 MSSIGAGYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYD 60
MSSIG GYDL+AS FSPDGR+FQVEYAQKAV+N+ T I +RGK+GVV+ +KL+ SKLY
Sbjct: 1 MSSIGTGYDLAASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYT 60
Query: 61 PGANKRIFHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYV 119
AN R+F+V+ ++G+ +G G L A EA ++ Y +P+ + V+ Y+
Sbjct: 61 DNANPRMFNVNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYI 120
Query: 120 HAYTLYSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEKL 179
H +TL + RPFGA S +K G L++V+PSG+++ Y A+GK +Q AK EIEKL
Sbjct: 121 HIHTL-GISRPFGAGAFFMSWNKQTGGRLFLVEPSGLNYEYKAWAVGKHRQAAKAEIEKL 179
Query: 180 KLSTLSMEQLAKEAARIIYVVHDELKDKHFELELAWVGEKTNGKFEMVPQSFLEECENYA 239
K+ L + QL KEAARII VV DE KDK+ ++E+ WVGE+TNGK+E VP + E +A
Sbjct: 180 KIEELDVNQLVKEAARIIMVVRDENKDKNVQIEMGWVGEQTNGKYEEVPSEVVTAAEEWA 239
Query: 240 KASLQDSDSDN 250
A L + D D+
Sbjct: 240 IAKLDEDDMDD 250
>sp|P21242|PSA7_YEAST Probable proteasome subunit alpha type-7 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=PRE10 PE=1
SV=2
Length = 288
Score = 216 bits (551), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/249 (47%), Positives = 160/249 (64%), Gaps = 6/249 (2%)
Query: 1 MSSIGAGYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYD 60
M+SIG GYDLS S FSPDGR FQVEYA KAVEN +T+IG++ DGVV AVEKL+ SKL
Sbjct: 1 MTSIGTGYDLSNSVFSPDGRNFQVEYAVKAVENGTTSIGIKCNDGVVFAVEKLITSKLLV 60
Query: 61 PGANKRIFHVDTHIG-LGSGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYV 119
P N +I VD HIG + SGLI GR L + EA+ ++ Y IP+ +R+ YV
Sbjct: 61 PQKNVKIQVVDRHIGCVYSGLIPDGRHLVNRGREEAASFKKLYKTPIPIPAFADRLGQYV 120
Query: 120 HAYTLYSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEKL 179
A+TLY+ VRPFG S + DK +G LY+++PSG GY G A GK +Q+AK E+EKL
Sbjct: 121 QAHTLYNSVRPFGVSTIFGGVDK-NGAHLYMLEPSGSYWGYKGAATGKGRQSAKAELEKL 179
Query: 180 ---KLSTLSMEQLAKEAARIIYVVHDELKDKHFELELAWVG-EKTNGKFEMVPQSFLEEC 235
LS + K+AA+IIY+ H++ K+K FELE++W +TNG + V L+E
Sbjct: 180 VDHHPEGLSAREAVKQAAKIIYLAHEDNKEKDFELEISWCSLSETNGLHKFVKGDLLQEA 239
Query: 236 ENYAKASLQ 244
++A+ +
Sbjct: 240 IDFAQKEIN 248
>sp|C6A459|PSA_THESM Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 /
DSM 12597) GN=psmA PE=3 SV=1
Length = 260
Score = 153 bits (386), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 136/231 (58%), Gaps = 6/231 (2%)
Query: 6 AGYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPGANK 65
AGYD + + FSPDGR+FQV+YA++AV+ +TA+G++ KDGVV+AVEK V SKL +P + +
Sbjct: 8 AGYDRAITVFSPDGRLFQVQYAREAVKRGATAVGVKCKDGVVLAVEKRVTSKLIEPESYE 67
Query: 66 RIFHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAYTL 124
+IF +D HI SG+I+ R L + A+ EA YR YG +PL +L +++ +T
Sbjct: 68 KIFQIDDHIAAASSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQMHTQ 127
Query: 125 YSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEKLKLSTL 184
Y VRPFGA+LL+A + + P L+ DPSG + AIG + A E+ +
Sbjct: 128 YGGVRPFGAALLMAGVN--EKPELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEKYRDEM 185
Query: 185 SMEQLAKEAARIIYVVHDELKDKHFELELAWVGEKTNGKFEMVPQSFLEEC 235
++E+ K A + + +E + E+ + V EK KF+ + + +C
Sbjct: 186 TLEEAIKLAVLALSKIMEEPSPESIEVAVISVKEK---KFKKITPEEVAKC 233
>sp|B6YSH9|PSA_THEON Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1)
GN=psmA PE=3 SV=1
Length = 260
Score = 151 bits (381), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/218 (39%), Positives = 130/218 (59%), Gaps = 15/218 (6%)
Query: 6 AGYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPGANK 65
AGYD + + FSPDGR+FQV YA++AV+ +TA+G++ K+GVV+AVEK + SKL +P + +
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKEGVVLAVEKRITSKLIEPSSYE 67
Query: 66 RIFHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAYTL 124
+IF +D HI SG+I+ R L + A+ EA YR YG +PL +L +++ A+T
Sbjct: 68 KIFQIDDHIAAAPSGIIADARVLVDRARLEAQVYRLTYGEPVPLTVLVKKICDLKQAHTQ 127
Query: 125 YSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEK------ 178
Y VRPFGA+LL+A + D P LY DPSG + AIG + A E
Sbjct: 128 YGGVRPFGAALLMAGVN--DKPELYETDPSGAYFEWRAVAIGSGRNTAMAIFEDHYSDDL 185
Query: 179 -----LKLSTLSMEQ-LAKEAARIIYVVHDELKDKHFE 210
+KL+ L++ + L + + I V + +KDK ++
Sbjct: 186 DMEGAIKLAILALAKTLEEPSPESIEVAYITMKDKRWK 223
>sp|O24733|PSA_THEK1 Proteasome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=psmA
PE=3 SV=1
Length = 260
Score = 150 bits (378), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/223 (38%), Positives = 129/223 (57%), Gaps = 18/223 (8%)
Query: 6 AGYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPGANK 65
AGYD + + FSPDGR+FQV YA++AV+ +TA+G++ KDGVV+AVEK + SKL +P + +
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPSSYE 67
Query: 66 RIFHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAYTL 124
+IF +D HI SG+I+ R L + A+ EA YR YG +PL +L +++ A+T
Sbjct: 68 KIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQ 127
Query: 125 YSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEK------ 178
Y VRPFGA+LL+A + + P L+ DPSG + AIG + A E+
Sbjct: 128 YGGVRPFGAALLMAGVN--EKPELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDDI 185
Query: 179 -----LKLSTL----SMEQLAKEAARIIYVVHDELKDKHFELE 212
+KL+ L ++E+ E + Y+ DE + K E
Sbjct: 186 GKDDAIKLAILALAKTLEEPTAEGIEVAYITMDEKRWKKLPRE 228
>sp|Q5JIU9|PSA_PYRKO Proteasome subunit alpha OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=psmA PE=3 SV=1
Length = 260
Score = 150 bits (378), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/223 (38%), Positives = 129/223 (57%), Gaps = 18/223 (8%)
Query: 6 AGYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPGANK 65
AGYD + + FSPDGR+FQV YA++AV+ +TA+G++ KDGVV+AVEK + SKL +P + +
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPSSYE 67
Query: 66 RIFHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAYTL 124
+IF +D HI SG+I+ R L + A+ EA YR YG +PL +L +++ A+T
Sbjct: 68 KIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQ 127
Query: 125 YSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEK------ 178
Y VRPFGA+LL+A + + P L+ DPSG + AIG + A E+
Sbjct: 128 YGGVRPFGAALLMAGVN--EKPELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDDI 185
Query: 179 -----LKLSTL----SMEQLAKEAARIIYVVHDELKDKHFELE 212
+KL+ L ++E+ E + Y+ DE + K E
Sbjct: 186 GKDDAIKLAILALAKTLEEPTAEGIEVAYITMDEKRWKKLPRE 228
>sp|C5A2C2|PSA_THEGJ Proteasome subunit alpha OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=psmA PE=3 SV=1
Length = 260
Score = 149 bits (377), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 18/223 (8%)
Query: 6 AGYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPGANK 65
AGYD + + FSPDGR+FQV YA++AV+ +TA+G++ K GVV+AVEK + S+L +P + +
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKGGVVLAVEKRITSRLIEPSSYE 67
Query: 66 RIFHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAYTL 124
+IF +D HI SG+I+ R L + A+ EA YR YG +PL +L +++ A+T
Sbjct: 68 KIFQIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQ 127
Query: 125 YSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEK------ 178
Y VRPFGA+LL+A + + P LY DPSG + AIG + A E+
Sbjct: 128 YGGVRPFGAALLMAGVN--EKPELYETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYSDDI 185
Query: 179 -----LKLSTL----SMEQLAKEAARIIYVVHDELKDKHFELE 212
+KL+ L ++E+ + E+ + Y+ DE + K + E
Sbjct: 186 DMEGAIKLAILALAKTLEEPSPESIEVAYITLDEKRWKKLDKE 228
>sp|Q9V122|PSA_PYRAB Proteasome subunit alpha OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=psmA PE=3 SV=1
Length = 260
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 126/217 (58%), Gaps = 15/217 (6%)
Query: 6 AGYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPGANK 65
AGYD + + FSPDGR+FQV YA++AV+ +TA+G++ KDGVV+AVEK + S+L +P + +
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCKDGVVLAVEKRITSRLIEPESYE 67
Query: 66 RIFHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAYTL 124
+IF +D HI SG+I+ R L A+ EA +R YG PL ++ +++ +T
Sbjct: 68 KIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQ 127
Query: 125 YSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNA-----------K 173
Y VRPFGA+LL+A + D P LY DPSG + AIG + A
Sbjct: 128 YGGVRPFGAALLMAGVN--DKPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEDKYRDDM 185
Query: 174 TEIEKLKLSTLSMEQ-LAKEAARIIYVVHDELKDKHF 209
T E +KL+ ++ + + K +A I V +KDK F
Sbjct: 186 TLDEAIKLAIFALAKTMEKPSAENIEVAVITVKDKKF 222
>sp|Q8TYB7|PSA_METKA Proteasome subunit alpha OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=psmA PE=3 SV=1
Length = 246
Score = 141 bits (355), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 119/193 (61%), Gaps = 2/193 (1%)
Query: 7 GYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPGANKR 66
YD + + FSPDGR+FQVEYA++AV+ +TA+G++ ++GVV+ V+K V SKL +P + ++
Sbjct: 9 AYDRAITVFSPDGRLFQVEYAREAVKRGTTALGIKVEEGVVLGVDKRVTSKLIEPESIEK 68
Query: 67 IFHVDTHIGLGS-GLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAYTLY 125
++ +DTHIG + GL++ R L E A+ EA YR YG I + +L + + YT +
Sbjct: 69 VYQIDTHIGAATAGLVADARVLVERARIEAQTYRYTYGEPIDVDVLVKAICDLKQVYTQH 128
Query: 126 SMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEKLKLSTLS 185
VRPFG +LL+A D T G L+ DPSG + AIG+ +Q A E+ ++
Sbjct: 129 GGVRPFGTALLIAGVD-TKGCRLFETDPSGALTEHKATAIGEGRQEALDVFEEEYREDMT 187
Query: 186 MEQLAKEAARIIY 198
+++ + A R +Y
Sbjct: 188 LQEAIELAVRALY 200
>sp|O59219|PSA_PYRHO Proteasome subunit alpha OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=psmA PE=3 SV=1
Length = 260
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 133/234 (56%), Gaps = 9/234 (3%)
Query: 6 AGYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPGANK 65
AGYD + + FSPDGR+FQV YA++AV+ +TA+G++ +GVV+AVEK + S+L +P + +
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCNEGVVLAVEKRITSRLIEPESYE 67
Query: 66 RIFHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAYTL 124
+IF +D HI SG+I+ R L A+ EA +R YG PL ++ +++ +T
Sbjct: 68 KIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQ 127
Query: 125 YSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEKLKLSTL 184
Y VRPFGA+LL+A + + P LY DPSG + AIG + A E+ +
Sbjct: 128 YGGVRPFGAALLMAGVN--EKPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKDDM 185
Query: 185 SMEQLAKEAARIIYVVHDELKDKHFELELAWVGEKTNGKFEMVPQSFLEECENY 238
S+E+ K A + ++ ++ E+ + V +K KF + + EE E Y
Sbjct: 186 SLEEAIKLAIFALAKTMEKPSAENIEVAIITVKDK---KFRKLSR---EEIEKY 233
>sp|Q8U0L6|PSA_PYRFU Proteasome subunit alpha OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=psmA PE=3 SV=1
Length = 260
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 113/189 (59%), Gaps = 3/189 (1%)
Query: 6 AGYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPGANK 65
AGYD + + FSPDGR+FQV YA++AV+ +TA+G++ +GVV+AVEK + S+L +P + +
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCGEGVVLAVEKRITSRLIEPDSYE 67
Query: 66 RIFHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAYTL 124
+IF +D HI SG+I+ R L A+ EA YR YG P+ ++ +++ +T
Sbjct: 68 KIFQIDDHIAAASSGIIADARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMHTQ 127
Query: 125 YSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEKLKLSTL 184
Y VRPFGA+LL+A + D P LY DPSG + AIG + A E+ +
Sbjct: 128 YGGVRPFGAALLMAGIN--DRPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYRDDM 185
Query: 185 SMEQLAKEA 193
++E K A
Sbjct: 186 NLEDAIKLA 194
>sp|Q9LSU1|PSA5_ORYSJ Proteasome subunit alpha type-5 OS=Oryza sativa subsp. japonica
GN=PAE1 PE=2 SV=1
Length = 237
Score = 135 bits (340), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 118/203 (58%), Gaps = 11/203 (5%)
Query: 8 YDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPGANKRI 67
YD + FSP+GR+FQVEYA +A++ STAIGL+ KDGVV+AVEK V S L +P + ++I
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLEPSSVEKI 67
Query: 68 FHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAY---T 123
+D HIG SGLI+ R L E A+ E +R YG + + + + +
Sbjct: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAICDLALRFGEGD 127
Query: 124 LYSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGC---AIGKAKQNAKTEIEKLK 180
SM RPFG SLL+A HD+ +GPSLY DPSG ++ C AIG + A + +++
Sbjct: 128 EESMSRPFGVSLLIAGHDE-NGPSLYYTDPSGT---FWQCNAKAIGSGSEGADSSLQEQY 183
Query: 181 LSTLSMEQLAKEAARIIYVVHDE 203
L++++ A I+ V +E
Sbjct: 184 NKELTLQEAETIALSILKQVMEE 206
>sp|Q9M4T8|PSA5_SOYBN Proteasome subunit alpha type-5 OS=Glycine max GN=PAE1 PE=2 SV=1
Length = 237
Score = 134 bits (337), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 116/200 (58%), Gaps = 5/200 (2%)
Query: 8 YDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPGANKRI 67
YD + FSP+GR+FQVEYA +A++ STAIGL+ K+GVV+AVEK + S L +P + ++I
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
Query: 68 FHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAY---T 123
+D HIG SGLI+ R L E A+ E +R YG + + + + +
Sbjct: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
Query: 124 LYSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEKLKLST 183
SM RPFG SLL+A HD+ +GPSLY DPSG G AIG + A + +++
Sbjct: 128 EESMSRPFGVSLLIAGHDE-NGPSLYYTDPSGTFWQCNGKAIGSGSEGADSSLQEQFNKD 186
Query: 184 LSMEQLAKEAARIIYVVHDE 203
L++++ A I+ V +E
Sbjct: 187 LTLQEAETIALSILKQVMEE 206
>sp|Q60177|PSA_METJA Proteasome subunit alpha OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=psmA PE=1 SV=1
Length = 261
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 130/224 (58%), Gaps = 5/224 (2%)
Query: 6 AGYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPGANK 65
+ YD + + FSP+GR++QVEYA++AV +TAIG+ KDGVV+AV++ + SKL + +
Sbjct: 7 SAYDRAITVFSPEGRLYQVEYAREAVRRGTTAIGIACKDGVVLAVDRRITSKLVKIRSIE 66
Query: 66 RIFHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAYTL 124
+IF +D H+ SGL++ R L + A+ EA YR YG I + +L +++ AYT
Sbjct: 67 KIFQIDDHVAAATSGLVADARVLIDRARLEAQIYRLTYGEEISIEMLAKKICDIKQAYTQ 126
Query: 125 YSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEKLKLSTL 184
+ VRPFG SLL+A DK + L+ DPSG Y AIG + +EK +
Sbjct: 127 HGGVRPFGVSLLIAGIDKNEA-RLFETDPSGALIEYKATAIGSGRPVVMELLEKEYRDDI 185
Query: 185 SMEQLAKEAARIIYVVHDELKDKHFELELAWVGEKTNGKFEMVP 228
++++ + A + ++++K ++ ++ + V + +F+ +P
Sbjct: 186 TLDEGLELAITALTKANEDIKPENVDVCIITV---KDAQFKKIP 226
>sp|Q8TPX5|PSA_METAC Proteasome subunit alpha OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=psmA PE=3 SV=1
Length = 247
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 108/171 (63%), Gaps = 3/171 (1%)
Query: 7 GYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPGANKR 66
GYD + + FSPDGR+FQVEYA++AV+ +TA+G++ DGVV+ V+K + S+L + + ++
Sbjct: 6 GYDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEK 65
Query: 67 IFHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAYTLY 125
IF +D HIG SGL++ R L + A+ EA R Y I + ++++++ + YT Y
Sbjct: 66 IFQIDEHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQY 125
Query: 126 SMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEI 176
VRP+G +LL+A D + P L+ DPSG Y AIG A +NA E+
Sbjct: 126 GGVRPYGTALLIAGVDD-NKPRLFETDPSGALLEYKATAIG-AGRNAVVEV 174
>sp|Q469M6|PSA_METBF Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=psmA PE=3 SV=1
Length = 249
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 108/171 (63%), Gaps = 3/171 (1%)
Query: 7 GYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPGANKR 66
GYD + + FSPDGR+FQVEYA++AV+ +TA+G++ DGVV+ V+K + S+L + + ++
Sbjct: 8 GYDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEK 67
Query: 67 IFHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAYTLY 125
IF +D HIG SGL++ R L + A+ EA R Y I + ++++++ + YT Y
Sbjct: 68 IFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQY 127
Query: 126 SMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEI 176
VRP+G +LL+A D + P L+ DPSG Y AIG A +NA E+
Sbjct: 128 GGVRPYGTALLIAGVDD-NLPRLFETDPSGALLEYKATAIG-AGRNAVVEV 176
>sp|O81149|PSA5A_ARATH Proteasome subunit alpha type-5-A OS=Arabidopsis thaliana GN=PAE1
PE=1 SV=1
Length = 237
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 118/203 (58%), Gaps = 11/203 (5%)
Query: 8 YDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPGANKRI 67
YD + FSP+GR+FQVEYA +A++ STAIG++ K+GVV+AVEK + S L +P + ++I
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSVEKI 67
Query: 68 FHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAY---T 123
+D HIG SGLI+ R L E A+ E +R YG + + + + +
Sbjct: 68 MEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGE 127
Query: 124 LYSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGC---AIGKAKQNAKTEIEKLK 180
SM RPFG SLL+A HD+ +GPSLY DPSG ++ C AIG + A + +++
Sbjct: 128 EESMSRPFGVSLLIAGHDE-NGPSLYYTDPSGT---FWQCNAKAIGSGSEGADSSLQEQF 183
Query: 181 LSTLSMEQLAKEAARIIYVVHDE 203
LS+++ A I+ V +E
Sbjct: 184 NKDLSLQEAETIAVSILKQVMEE 206
>sp|Q8PTU1|PSA_METMA Proteasome subunit alpha OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=psmA PE=3 SV=1
Length = 249
Score = 132 bits (331), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 108/171 (63%), Gaps = 3/171 (1%)
Query: 7 GYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPGANKR 66
GYD + + FSPDGR+FQVEYA++AV+ +TA+G++ DGVV+ V+K + S+L + + ++
Sbjct: 8 GYDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEK 67
Query: 67 IFHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAYTLY 125
IF +D HIG SGL++ R L + A+ EA R Y I + ++++++ + YT Y
Sbjct: 68 IFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQY 127
Query: 126 SMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEI 176
VRP+G +LL+A D + P L+ DPSG Y AIG A +NA E+
Sbjct: 128 GGVRPYGTALLIAGVDD-NKPRLFETDPSGALLEYKATAIG-AGRNAVVEV 176
>sp|Q59565|PSA_METTE Proteasome subunit alpha OS=Methanosarcina thermophila GN=psmA PE=3
SV=1
Length = 247
Score = 131 bits (330), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 107/171 (62%), Gaps = 3/171 (1%)
Query: 7 GYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPGANKR 66
GYD + + FSPDGR+FQVEYA++AV+ +TA+G++ DGVV+ V+K + S+L + + ++
Sbjct: 6 GYDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEK 65
Query: 67 IFHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAYTLY 125
IF +D HIG SGL++ R L + A+ EA R Y I + ++++++ + YT Y
Sbjct: 66 IFQIDDHIGAATSGLVADARALVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQY 125
Query: 126 SMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEI 176
VRP+G +LL+A D P L+ DPSG Y AIG A +NA E+
Sbjct: 126 GGVRPYGTALLIAGVDDKR-PRLFETDPSGALLEYKATAIG-AGRNAVVEV 174
>sp|Q42134|PSA5B_ARATH Proteasome subunit alpha type-5-B OS=Arabidopsis thaliana GN=PAE2
PE=1 SV=2
Length = 237
Score = 130 bits (327), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 118/203 (58%), Gaps = 11/203 (5%)
Query: 8 YDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPGANKRI 67
YD + FSP+GR+FQVEYA +A++ STAIG++ K+GVV+AVEK + S L +P + ++I
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSVEKI 67
Query: 68 FHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAY---T 123
+D HIG SGLI+ R L E A+ E +R YG + + + + +
Sbjct: 68 MEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGE 127
Query: 124 LYSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGC---AIGKAKQNAKTEIEKLK 180
SM RPFG SLL+A HD+ +GPSLY DPSG ++ C AIG + A + +++
Sbjct: 128 EESMSRPFGVSLLIAGHDE-NGPSLYYTDPSGT---FWQCNAKAIGSGSEGADSSLQEQF 183
Query: 181 LSTLSMEQLAKEAARIIYVVHDE 203
+++++ A I+ V +E
Sbjct: 184 NKDITLQEAETIAVSILKQVMEE 206
>sp|O26782|PSA_METTH Proteasome subunit alpha OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=psmA PE=3 SV=1
Length = 248
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 125/224 (55%), Gaps = 4/224 (1%)
Query: 6 AGYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPGANK 65
AGYD + + FSPDGR+FQVEYA++AV+ +T++G++ K+G+V+ V+K SKL +P + +
Sbjct: 7 AGYDRAITVFSPDGRLFQVEYAREAVKRGTTSLGVKSKEGIVLVVDKRPTSKLVEPKSIE 66
Query: 66 RIFHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAYTL 124
+IF +D HIG SGL++ R + E A+ EA R Y I + L +++ YT
Sbjct: 67 KIFQIDEHIGAATSGLVADARAIIEKARLEAQINRITYNEPIRVESLAKKICDMKQMYTQ 126
Query: 125 YSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEKLKLSTL 184
+ VRPFG +L++ + G L+ DPSG Y AIG + A E EK +
Sbjct: 127 HGGVRPFGTALIIGGVNGR-GCRLFETDPSGALIEYKATAIGAGRPAAMEEFEKKYSDDM 185
Query: 185 SMEQLAKEAARIIYVVHDELKDKHFELELAWVGEKTNGKFEMVP 228
++ Q + A +Y E K +E+A + E + K+ +P
Sbjct: 186 NLNQAIELALDAVYEAT-EGKTTPESVEIAVI-EAADKKYRRLP 227
>sp|O29760|PSA_ARCFU Proteasome subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=psmA PE=1 SV=1
Length = 246
Score = 128 bits (321), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 103/170 (60%), Gaps = 4/170 (2%)
Query: 7 GYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPGANKR 66
GYD + + FSPDGR+FQVEYA++AV+ +TAIG++ K+GV++ +K V SKL + ++
Sbjct: 7 GYDRAITVFSPDGRLFQVEYAREAVKRGATAIGIKCKEGVILIADKRVGSKLLEADTIEK 66
Query: 67 IFHVDTHI-GLGSGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAYTLY 125
I+ +D HI SGL++ R L + A+ EA R Y I + L +++ + YT Y
Sbjct: 67 IYKIDEHICAATSGLVADARVLIDRARIEAQINRLTYDEPITVKELAKKICDFKQQYTQY 126
Query: 126 SMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTE 175
VRPFG SLL+A D+ P LY DPSG Y AIG + NA TE
Sbjct: 127 GGVRPFGVSLLIAGVDEV--PKLYETDPSGALLEYKATAIGMGR-NAVTE 173
>sp|Q6M0L9|PSA_METMP Proteasome subunit alpha OS=Methanococcus maripaludis (strain S2 /
LL) GN=psmA PE=3 SV=1
Length = 259
Score = 127 bits (319), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 132/238 (55%), Gaps = 8/238 (3%)
Query: 5 GAGYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPGAN 64
+GYD + + FSP+GR++QVEYA++AV +TA+G++ KDGVV+AV++ + SKL D +
Sbjct: 7 ASGYDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSI 66
Query: 65 KRIFHVDTHI-GLGSGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAYT 123
++IF +D HI SGL++ R L + A+ EA R YG I + L +++ AYT
Sbjct: 67 EKIFQIDDHIVAATSGLVADARVLIDRARIEAQMNRVSYGEAITVEALAKKICDIKQAYT 126
Query: 124 LYSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEKLKLST 183
+ RPFG +LL+ D+ L+ DPSG Y AIG + A +E
Sbjct: 127 QHGGARPFGLALLITGIDR-HSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDEN 185
Query: 184 LSMEQLAKEAARIIYVVHDELKDKHFELELAWVGEKTNGKFEMVPQSFLEECENYAKA 241
+++ + + A + +ELK ++ ++ + K +GK +V + ++E E KA
Sbjct: 186 MTVSEGMELALYALSKTTEELKPENIDMAII----KDSGK--LVEKISVDEIEKIVKA 237
>sp|A6VIP0|PSA_METM7 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=psmA PE=3 SV=1
Length = 259
Score = 127 bits (318), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 132/238 (55%), Gaps = 8/238 (3%)
Query: 5 GAGYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPGAN 64
+GYD + + FSP+GR++QVEYA++AV +TA+G++ KDGVV+AV++ + SKL D +
Sbjct: 7 ASGYDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSI 66
Query: 65 KRIFHVDTHI-GLGSGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAYT 123
++IF +D HI SGL++ R L + A+ EA R YG I + L +++ AYT
Sbjct: 67 EKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYT 126
Query: 124 LYSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEKLKLST 183
+ RPFG +LL+ D+ L+ DPSG Y AIG + A +E
Sbjct: 127 QHGGARPFGLALLITGIDR-HSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDEN 185
Query: 184 LSMEQLAKEAARIIYVVHDELKDKHFELELAWVGEKTNGKFEMVPQSFLEECENYAKA 241
+++ + + A + +ELK ++ ++ + K +GK +V + ++E E KA
Sbjct: 186 MTVNEGMELALYALSKTTEELKPENIDMAIV----KDSGK--LVEKISVDEIEKIVKA 237
>sp|A4FZT6|PSA_METM5 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=psmA PE=3 SV=1
Length = 259
Score = 127 bits (318), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 132/238 (55%), Gaps = 8/238 (3%)
Query: 5 GAGYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPGAN 64
+GYD + + FSP+GR++QVEYA++AV +TA+G++ KDGVV+AV++ + SKL D +
Sbjct: 7 ASGYDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSI 66
Query: 65 KRIFHVDTHI-GLGSGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAYT 123
++IF +D HI SGL++ R L + A+ EA R YG I + L +++ AYT
Sbjct: 67 EKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYT 126
Query: 124 LYSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEKLKLST 183
+ RPFG +LL+ D+ L+ DPSG Y AIG + A +E
Sbjct: 127 QHGGARPFGLALLITGIDR-HSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYSED 185
Query: 184 LSMEQLAKEAARIIYVVHDELKDKHFELELAWVGEKTNGKFEMVPQSFLEECENYAKA 241
+++ + + A + +ELK ++ ++ + K +GK +V + ++E E KA
Sbjct: 186 MTVNEGMELALYALSKTTEELKPENIDMAIV----KDSGK--LVEKISVDEIEKIVKA 237
>sp|O81146|PSA6A_ARATH Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana GN=PAA1
PE=1 SV=2
Length = 246
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 106/176 (60%), Gaps = 2/176 (1%)
Query: 5 GAGYDLSASQFSPDGRVFQVEYAQKAVENSS-TAIGLRGKDGVVIAVEKLVLSKLYDPGA 63
GAGYD + FSP+GR+FQVEYA KAV+ + T+IG+RGKD V + +K V KL D +
Sbjct: 6 GAGYDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSS 65
Query: 64 NKRIFHVDTHIGL-GSGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAY 122
+F + +IGL +G+ + R L + A+ +A+E+R YG +P+ +L + ++ Y
Sbjct: 66 VTHLFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVY 125
Query: 123 TLYSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEK 178
T ++ +RP G ++ D+ +GP LY DP+G +G+ + G +Q A +EK
Sbjct: 126 TQHAYMRPLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEK 181
>sp|A6URN9|PSA_METVS Proteasome subunit alpha OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=psmA PE=3 SV=1
Length = 259
Score = 125 bits (313), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 123/221 (55%), Gaps = 6/221 (2%)
Query: 5 GAGYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPGAN 64
+GYD + + FSP+GR++QVEYA++AV +TA+G++ KDGVV+AV++ + SKL D +
Sbjct: 7 ASGYDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSI 66
Query: 65 KRIFHVDTHI-GLGSGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAYT 123
++IF +D HI SGL++ R L + A+ EA R YG I + L +++ AYT
Sbjct: 67 EKIFQIDDHIVAATSGLVADARVLIDRARVEAQVNRISYGEAITVEALAKKICDIKQAYT 126
Query: 124 LYSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEKLKLST 183
+ RPFG +LL+ D+ L+ DPSG Y AIG + A +E+
Sbjct: 127 HHGGARPFGLALLITGIDR-HSARLFETDPSGALIEYKATAIGSGRPVAMEILEEKYDEN 185
Query: 184 LSMEQLAKEAARIIYVVHDELKDKHFELELAWVGEKTNGKF 224
+S+ + + A + +ELK ++ ++ + K GK
Sbjct: 186 MSVSEGMELAIYALSKTTEELKPENIDMAIV----KDTGKL 222
>sp|Q9XG77|PSA6_TOBAC Proteasome subunit alpha type-6 OS=Nicotiana tabacum GN=PAA1 PE=2
SV=1
Length = 246
Score = 124 bits (311), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 105/176 (59%), Gaps = 2/176 (1%)
Query: 5 GAGYDLSASQFSPDGRVFQVEYAQKAVENSS-TAIGLRGKDGVVIAVEKLVLSKLYDPGA 63
G GYD + FSP+GR+FQVEYA KAV+ + T+IG+RGKD V + +K V KL D +
Sbjct: 6 GGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQTS 65
Query: 64 NKRIFHVDTHIGL-GSGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAY 122
+F + ++GL +G+ + R L + A+ EA+E+R KYG +P+ +L++ ++ Y
Sbjct: 66 VSHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFKYGYEMPVDVLSKWIADKSQVY 125
Query: 123 TLYSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEK 178
T ++ +RP G ++ D+ GP L+ DP+G G+ + G +Q A +EK
Sbjct: 126 TQHAYMRPLGVVAMILGIDEEKGPQLFKCDPAGHFFGHKATSAGSKEQEAINFLEK 181
>sp|O81147|PSA6B_ARATH Proteasome subunit alpha type-6-B OS=Arabidopsis thaliana GN=PAA2
PE=1 SV=1
Length = 246
Score = 124 bits (310), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 105/176 (59%), Gaps = 2/176 (1%)
Query: 5 GAGYDLSASQFSPDGRVFQVEYAQKAVENSS-TAIGLRGKDGVVIAVEKLVLSKLYDPGA 63
GAGYD + FSP+GR+FQVEYA KAV+ + T+IG+RGKD V + +K V KL D +
Sbjct: 6 GAGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQSS 65
Query: 64 NKRIFHVDTHIGL-GSGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAY 122
+F V ++GL +G+ + R L + A+ EA+E+R +YG +P +L + ++ Y
Sbjct: 66 VSHLFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIADKSQVY 125
Query: 123 TLYSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEK 178
T ++ +RP G ++ D+ GP LY DP+G +G+ + G +Q A +EK
Sbjct: 126 TQHAYMRPLGVVAMVLGIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEK 181
>sp|B8GEZ3|PSA_METPE Proteasome subunit alpha OS=Methanosphaerula palustris (strain ATCC
BAA-1556 / DSM 19958 / E1-9c) GN=psmA PE=3 SV=1
Length = 241
Score = 124 bits (310), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 102/162 (62%), Gaps = 4/162 (2%)
Query: 7 GYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPGANKR 66
GYD + + FSPDGR++QVEYA++AV+ +TA+G++ DG+V+ V+K V SKL +P + ++
Sbjct: 8 GYDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKCNDGIVLLVDKRVNSKLLEPSSIEK 67
Query: 67 IFHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAYTLY 125
IF +D HIG+ SGL+ R L + A+ E+ R Y I + +L++++ ++ YT +
Sbjct: 68 IFKIDNHIGVASSGLVGDARSLVDRARVESQVNRVSYDEQIDVEMLSKKLCDHMQTYTQF 127
Query: 126 SMVRPFGASLLLASHDKTDGP-SLYVVDPSGVSHGYFGCAIG 166
RP+G +LL+A +DG L+ DPSG Y IG
Sbjct: 128 GGARPYGTALLIAGI--SDGQFRLFETDPSGTLLEYKATGIG 167
>sp|A9A846|PSA_METM6 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=psmA PE=3 SV=1
Length = 259
Score = 124 bits (310), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 130/238 (54%), Gaps = 8/238 (3%)
Query: 5 GAGYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPGAN 64
+GYD + + FSP+GR++QVEYA++AV +TA+G++ DGVV+AV++ + SKL D +
Sbjct: 7 ASGYDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCNDGVVLAVDRRITSKLIDVSSI 66
Query: 65 KRIFHVDTHI-GLGSGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAYT 123
++IF +D HI SGL++ R L + A+ EA R YG I + L +++ AYT
Sbjct: 67 EKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYT 126
Query: 124 LYSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEKLKLST 183
+ RPFG +LL+ D+ L+ DPSG Y AIG + A +E
Sbjct: 127 QHGGARPFGLALLITGIDRHSA-RLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDEN 185
Query: 184 LSMEQLAKEAARIIYVVHDELKDKHFELELAWVGEKTNGKFEMVPQSFLEECENYAKA 241
+ + + + A + +ELK ++ ++ + K +GK +V + ++E E KA
Sbjct: 186 MIVSEGMELALYALSKTTEELKPENIDMAIV----KDSGK--LVEKISVDEIEKIVKA 237
>sp|Q18K08|PSA_HALWD Proteasome subunit alpha OS=Haloquadratum walsbyi (strain DSM
16790) GN=psmA PE=3 SV=1
Length = 250
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 114/198 (57%), Gaps = 4/198 (2%)
Query: 8 YDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPGANKRI 67
YD + FSPDGR++QVEYA++AV+ + ++G+R DG+V+A +K S L +P + ++I
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASVGIRTPDGIVLAADKRSRSPLMEPTSVEKI 69
Query: 68 FHVDTHIGLGS-GLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAYTLYS 126
D H+G+ S G ++ RQL + A+ +A R +YG + + L + V+ + YT
Sbjct: 70 HKTDDHVGIASAGHVADARQLIDFARRQAQVNRLRYGEPVGIETLTKNVTDNIQQYTQVG 129
Query: 127 MVRPFGASLLLASHDKTDG-PSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEKLKLSTLS 185
RPFG +LL+ + DG P LY DPSG + + +IG + + + +E+ LS
Sbjct: 130 GARPFGVALLIGGIE--DGSPRLYETDPSGTPYEWKAVSIGADRSDLQEHLEENYTEELS 187
Query: 186 MEQLAKEAARIIYVVHDE 203
+++ A R I + +D+
Sbjct: 188 LDEGVGLALRTIAISNDD 205
>sp|A3CW55|PSA_METMJ Proteasome subunit alpha OS=Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1) GN=psmA PE=3 SV=1
Length = 240
Score = 120 bits (302), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 103/165 (62%), Gaps = 4/165 (2%)
Query: 7 GYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPGANKR 66
GYD + + FSPDGR++QVEYA++AV+ +TA+G++ +GVV+ V+K V S+L +P + ++
Sbjct: 8 GYDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKCSEGVVLIVDKRVTSRLLEPVSIEK 67
Query: 67 IFHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAYTLY 125
IF +D HIG+ SGL+ R L + A+ E+ R Y I + +L +++ ++ YT +
Sbjct: 68 IFKIDAHIGVASSGLVGDARSLVDRARVESQINRVSYNEPINVEILAKKLCDHMQTYTQF 127
Query: 126 SMVRPFGASLLLASHDKTDGPS-LYVVDPSGVSHGYFGCAIGKAK 169
RP+G +LL+A +DG + L+ DPSG Y IG +
Sbjct: 128 GGARPYGTALLIAG--VSDGEARLFETDPSGTLLEYKATGIGTGR 170
>sp|A7I9C7|PSA_METB6 Proteasome subunit alpha OS=Methanoregula boonei (strain 6A8)
GN=psmA PE=3 SV=1
Length = 240
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 108/183 (59%), Gaps = 4/183 (2%)
Query: 7 GYDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPGANKR 66
GYD + + FSPDGR++QVEYA++AV+ +TA+G++ DGVV+ V+K V SKL + + ++
Sbjct: 8 GYDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKAHDGVVLIVDKRVSSKLLESSSIEK 67
Query: 67 IFHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAYTLY 125
IF +D HIG+ SGL+ R L + A+ E R Y I + L +++ ++ T Y
Sbjct: 68 IFKIDEHIGVASSGLVGDARALVDRARIECQINRVSYDERIEVEALAKKLCDHMQTLTQY 127
Query: 126 SMVRPFGASLLLASHDKTDGPS-LYVVDPSGVSHGYFGCAIGKAKQNAKTEIEKLKLSTL 184
+RP+G +LL+A +DG S L+ DPSG Y IG + A E+ + L
Sbjct: 128 GGIRPYGTALLIAG--VSDGESRLFETDPSGTLLEYKATGIGIGRPAAMKVFEEEYTADL 185
Query: 185 SME 187
+++
Sbjct: 186 ALK 188
>sp|P52427|PSA4_SPIOL Proteasome subunit alpha type-4 OS=Spinacia oleracea GN=PAC1 PE=2
SV=1
Length = 250
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 117/220 (53%), Gaps = 2/220 (0%)
Query: 8 YDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPG-ANKR 66
YD + FSP+GR++QVEYA +A+ N+ +AIG+ KDGVV+ EK V SKL + ++
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILAKDGVVLIGEKKVTSKLLQTSTSTEK 64
Query: 67 IFHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAYTLY 125
++ +D H+ +G++S L TA+ +A Y Y +P+ L + + YT +
Sbjct: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPMPVEQLVQSLCDTKQGYTQF 124
Query: 126 SMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEKLKLSTLS 185
+RPFG S L A DK G LY+ DPSG G+ AIG Q A++ +++ ++
Sbjct: 125 GGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKATAIGANNQAAQSMLKQDYKDDVT 184
Query: 186 MEQLAKEAARIIYVVHDELKDKHFELELAWVGEKTNGKFE 225
E K A + + D +LELA V +GK +
Sbjct: 185 REDAVKLALKALSKTMDSTSLTSEKLELAEVYLLPSGKVK 224
>sp|O82530|PSA4_PETHY Proteasome subunit alpha type-4 OS=Petunia hybrida GN=PAC1 PE=2
SV=1
Length = 249
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 115/211 (54%), Gaps = 2/211 (0%)
Query: 8 YDLSASQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPG-ANKR 66
YD + FSP+GR++QVEYA +A+ N+ +AIG+ KDGVV+ EK V SKL ++++
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGISSKDGVVLVGEKKVTSKLLQTSTSSEK 64
Query: 67 IFHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAYTLY 125
++ +D H+ +G++S L TA+ +A Y Y +P+ L + + YT Y
Sbjct: 65 MYKIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPMPVEQLVQSLCDTKQGYTQY 124
Query: 126 SMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEKLKLSTLS 185
+ PFG S L A DK G L++ DPSG G+ AIG Q A++ +++ ++
Sbjct: 125 GGLPPFGVSFLFAGWDKNFGFQLFMSDPSGNYAGWKAAAIGANNQAAQSMLKQDYKDDIT 184
Query: 186 MEQLAKEAARIIYVVHDELKDKHFELELAWV 216
E+ + A +++ D +LELA V
Sbjct: 185 REEAVQLALKVLSKTMDSTSLTSEKLELAEV 215
>sp|Q9U793|PSA2_TRYBB Proteasome subunit alpha type-2 OS=Trypanosoma brucei brucei PE=2
SV=1
Length = 231
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 115/227 (50%), Gaps = 9/227 (3%)
Query: 13 SQFSPDGRVFQVEYAQKAVENSSTAIGLRGKDGVVIAVEKLVLSKLYDPGANKRIFHVDT 72
+ FSP GR+ Q+EYA A +TA+G++ DGVVIA EK S L D ++F +D
Sbjct: 9 TTFSPSGRLVQIEYATTAASKGTTALGVKATDGVVIAAEKKTTSPLADSLTLHKVFALDD 68
Query: 73 HIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAYTLYSMVRPF 131
H+G SG+ R L + A+ YR Y +P+ L ++S +T VRPF
Sbjct: 69 HVGCTYSGIGPDCRVLVDAARRACQRYRLTYHEPMPISQLVRQISFLFQEFTQSGGVRPF 128
Query: 132 GASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEKLKLSTLSMEQLAK 191
G SLL+A D + G LY +DPSG + +IGK +A+T +EK + + +E
Sbjct: 129 GCSLLVAGAD-SRGNHLYQLDPSGTFWTWKATSIGKGSPDARTFLEKRYTNEMEIE---- 183
Query: 192 EAARIIYVVHDELKDKHFELELAWVGEKTNGKFEMVPQSFLEECENY 238
+A + E D E VG G+FE++ +E+ ++Y
Sbjct: 184 DAVHTALLTLKEGFDGRMTAENTQVGRVVEGRFELLT---VEQLKDY 227
>sp|Q9XZJ4|PSA6_DROME Proteasome subunit alpha type-6 OS=Drosophila melanogaster
GN=Prosalpha1 PE=2 SV=2
Length = 244
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 123/232 (53%), Gaps = 6/232 (2%)
Query: 6 AGYDLSASQFSPDGRVFQVEYAQKAV-ENSSTAIGLRGKDGVVIAVEKLVLSKLYDPGAN 64
AG+D + FSP+GR++QVEYA KA+ + + T + L+ D V+A +K V K P
Sbjct: 7 AGFDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETV 66
Query: 65 KRIFHVDTHIGLG-SGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAYT 123
+F + IG +G I+ R + A+ EA+ +R KYG +P+ +L R++ YT
Sbjct: 67 THLFRITKDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYT 126
Query: 124 LYSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEKLKLST 183
+ +RP G S++L ++D GPS+Y DP+G G+ C++G A + +EK
Sbjct: 127 QNAEMRPLGCSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYKPN 186
Query: 184 LSMEQLAKEAARII-YVVHDELKDKHFELELAWVGEKTNGKFEMVPQSFLEE 234
LS E+ + A + V+ + K E+ V K++ F ++ + +EE
Sbjct: 187 LSEEKAIQLAISCLSSVLAIDFKPNGIEI---GVVSKSDPTFRILDEREIEE 235
>sp|Q9LSU3|PSA6_ORYSJ Proteasome subunit alpha type-6 OS=Oryza sativa subsp. japonica
GN=PAA1 PE=2 SV=1
Length = 246
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 104/176 (59%), Gaps = 2/176 (1%)
Query: 5 GAGYDLSASQFSPDGRVFQVEYAQKAVENSS-TAIGLRGKDGVVIAVEKLVLSKLYDPGA 63
GAGYD + FSP+GR++QVEYA KAV+++ T+IG+RGKD V + +K V KL D +
Sbjct: 6 GAGYDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTS 65
Query: 64 NKRIFHVDTHIGL-GSGLISAGRQLAETAKTEASEYRSKYGGNIPLHLLNERVSMYVHAY 122
+F + +IGL +GL + R L A+ EA+E+R K+G +P+ +L + ++ Y
Sbjct: 66 VTHLFPITKYIGLLATGLTADARSLVYQARNEAAEFRFKWGYEMPVDVLAKWIADKAQVY 125
Query: 123 TLYSMVRPFGASLLLASHDKTDGPSLYVVDPSGVSHGYFGCAIGKAKQNAKTEIEK 178
T ++ +RP G ++ +D+ L+ DP+G G+ + G +Q A +EK
Sbjct: 126 TQHAYMRPLGVVAMVLGYDEEKNAQLFKCDPAGHFFGHKATSAGLKEQEAINFLEK 181
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.132 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,355,585
Number of Sequences: 539616
Number of extensions: 3705597
Number of successful extensions: 9284
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 84
Number of HSP's that attempted gapping in prelim test: 8768
Number of HSP's gapped (non-prelim): 273
length of query: 252
length of database: 191,569,459
effective HSP length: 115
effective length of query: 137
effective length of database: 129,513,619
effective search space: 17743365803
effective search space used: 17743365803
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)