BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14446
(125 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9V3U9|SLMO_DROME Protein slowmo OS=Drosophila melanogaster GN=slmo PE=1 SV=1
Length = 215
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 92/125 (73%)
Query: 1 MNTAVKGIDVIDRKVENGILKSHRLISSQWGLPNWARSVVGSTNIFYASERSEVNPITRQ 60
M ++ G DV++R+V +G+L +HRL+ S+W P W +++G+ +ASERS V+P +Q
Sbjct: 29 MTPSIIGTDVVERRVVDGVLHTHRLVQSKWYFPKWTHALIGTAKTCFASERSTVDPERKQ 88
Query: 61 MTLETTNLTYGHVIAVDERLCYQPHPEDNSKTLLKQEAVVTVRGIPLSSYVENMLTSKIS 120
M L+T NLT+ I+VDE L Y+PHP D SKTLLKQEA VTV G+PLS Y+E++LTS IS
Sbjct: 89 MVLKTNNLTFCRNISVDEVLYYEPHPSDASKTLLKQEATVTVFGVPLSHYMEDLLTSTIS 148
Query: 121 HNAGK 125
NAGK
Sbjct: 149 TNAGK 153
>sp|Q6P9U4|SLMO2_RAT Protein slowmo homolog 2 OS=Rattus norvegicus GN=Slmo2 PE=2 SV=1
Length = 195
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 96/127 (75%), Gaps = 2/127 (1%)
Query: 1 MNTAVKGIDVIDRKVE-NGILKSHRLISSQWGLPNWARSVVGSTNI-FYASERSEVNPIT 58
MN +V G+DV+DR V+ +G L SHRL+S++WGLP+ +S++G+ Y E S V+PI
Sbjct: 29 MNPSVVGVDVLDRHVDPSGKLHSHRLLSTEWGLPSIVKSLIGAARTKTYVQEHSVVDPIR 88
Query: 59 RQMTLETTNLTYGHVIAVDERLCYQPHPEDNSKTLLKQEAVVTVRGIPLSSYVENMLTSK 118
R M L++TN+++ ++++VDERL Y+PHP+D KT+L QEA++TV+G+ LSSY+E ++ S
Sbjct: 89 RTMELKSTNISFTNMVSVDERLTYKPHPQDPEKTVLTQEALITVKGVSLSSYLEGLMAST 148
Query: 119 ISHNAGK 125
IS NA K
Sbjct: 149 ISSNANK 155
>sp|Q6TMK8|SLMO2_CRIGR Protein slowmo homolog 2 OS=Cricetulus griseus GN=SLMO2 PE=2 SV=1
Length = 195
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 96/127 (75%), Gaps = 2/127 (1%)
Query: 1 MNTAVKGIDVIDRKVE-NGILKSHRLISSQWGLPNWARSVVGSTNI-FYASERSEVNPIT 58
MN +V G+DV+DR V+ +G L SHRL+S++WGLP+ +S++G+ Y E S V+P+
Sbjct: 29 MNPSVVGVDVLDRHVDPSGKLHSHRLLSTEWGLPSIVKSLIGAARTKTYVQEHSVVDPVK 88
Query: 59 RQMTLETTNLTYGHVIAVDERLCYQPHPEDNSKTLLKQEAVVTVRGIPLSSYVENMLTSK 118
+ M L++TN+++ ++++VDERL Y+PHP+D KT+L QEA++TV+G+ LSSY+E ++ S
Sbjct: 89 KTMELKSTNISFTNMVSVDERLTYKPHPQDPEKTVLTQEAIITVKGVSLSSYLEGLMAST 148
Query: 119 ISHNAGK 125
IS NA K
Sbjct: 149 ISSNANK 155
>sp|Q4R5S9|SLMO2_MACFA Protein slowmo homolog 2 OS=Macaca fascicularis GN=SLMO2 PE=2 SV=1
Length = 194
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 96/127 (75%), Gaps = 2/127 (1%)
Query: 1 MNTAVKGIDVIDRKVE-NGILKSHRLISSQWGLPNWARSVVGSTNI-FYASERSEVNPIT 58
MN +V G+DV+DR ++ +G L SHRL+S++WGLP+ +S++G+ Y E S V+P+
Sbjct: 29 MNPSVVGVDVLDRHIDPSGKLHSHRLLSTEWGLPSIVKSLIGAARTKTYVQEHSVVDPVE 88
Query: 59 RQMTLETTNLTYGHVIAVDERLCYQPHPEDNSKTLLKQEAVVTVRGIPLSSYVENMLTSK 118
+ M L++TN+++ ++++VDERL Y+PHP+D KT+L QEA++TV+G+ LSSY+E ++ S
Sbjct: 89 KTMELKSTNISFTNMVSVDERLIYKPHPQDPDKTILTQEAIITVKGVSLSSYLEGLMAST 148
Query: 119 ISHNAGK 125
IS NA K
Sbjct: 149 ISSNASK 155
>sp|A5GFX0|SLMO2_PIG Protein slowmo homolog 2 OS=Sus scrofa GN=SLMO2 PE=3 SV=1
Length = 194
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 96/127 (75%), Gaps = 2/127 (1%)
Query: 1 MNTAVKGIDVIDRKVE-NGILKSHRLISSQWGLPNWARSVVGSTNI-FYASERSEVNPIT 58
MN +V G+DV+DR ++ +G L SHRL+S++WGLP+ +S++G+ Y E S V+P+
Sbjct: 29 MNPSVVGVDVLDRHIDASGKLHSHRLLSTEWGLPSIVKSIIGAARTKTYVQEHSVVDPVA 88
Query: 59 RQMTLETTNLTYGHVIAVDERLCYQPHPEDNSKTLLKQEAVVTVRGIPLSSYVENMLTSK 118
+ M L++TN+++ ++++VDERL Y+PHP+D+ KT+L QEA++TV+G+ L SY+E ++ S
Sbjct: 89 KTMELKSTNISFTNMVSVDERLIYKPHPQDSEKTVLTQEAIITVKGVSLGSYLEGLMAST 148
Query: 119 ISHNAGK 125
IS NA K
Sbjct: 149 ISSNANK 155
>sp|Q9Y3B1|SLMO2_HUMAN Protein slowmo homolog 2 OS=Homo sapiens GN=SLMO2 PE=1 SV=2
Length = 194
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 96/127 (75%), Gaps = 2/127 (1%)
Query: 1 MNTAVKGIDVIDRKVE-NGILKSHRLISSQWGLPNWARSVVGSTNI-FYASERSEVNPIT 58
MN +V G+DV+DR ++ +G L SHRL+S++WGLP+ +S++G+ Y E S V+P+
Sbjct: 29 MNPSVVGVDVLDRHIDPSGKLHSHRLLSTEWGLPSIVKSLIGAARTKTYVQEHSVVDPVE 88
Query: 59 RQMTLETTNLTYGHVIAVDERLCYQPHPEDNSKTLLKQEAVVTVRGIPLSSYVENMLTSK 118
+ M L++TN+++ ++++VDERL Y+PHP+D KT+L QEA++TV+G+ LSSY+E ++ S
Sbjct: 89 KTMELKSTNISFTNMVSVDERLIYKPHPQDPEKTVLTQEAIITVKGVSLSSYLEGLMAST 148
Query: 119 ISHNAGK 125
IS NA K
Sbjct: 149 ISSNASK 155
>sp|Q9CYY7|SLMO2_MOUSE Protein slowmo homolog 2 OS=Mus musculus GN=Slmo2 PE=2 SV=2
Length = 195
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 62/127 (48%), Positives = 96/127 (75%), Gaps = 2/127 (1%)
Query: 1 MNTAVKGIDVIDRKVE-NGILKSHRLISSQWGLPNWARSVVGSTNI-FYASERSEVNPIT 58
MN +V G+DV+DR V+ +G L SHRL+S++WGLP+ +S++G+ Y E S V+P+T
Sbjct: 29 MNPSVVGVDVLDRHVDPSGKLHSHRLLSTEWGLPSIVKSLIGAARTKTYVQEHSVVDPVT 88
Query: 59 RQMTLETTNLTYGHVIAVDERLCYQPHPEDNSKTLLKQEAVVTVRGIPLSSYVENMLTSK 118
R M L++TN+++ ++++VDERL Y+PH +D KT+L QEA++TV+G+ LSSY+E ++ S
Sbjct: 89 RTMELKSTNISFTNMVSVDERLTYKPHLQDPEKTVLTQEALITVKGVSLSSYLEGLMAST 148
Query: 119 ISHNAGK 125
IS NA K
Sbjct: 149 ISSNASK 155
>sp|Q58DB0|SLMO2_BOVIN Protein slowmo homolog 2 OS=Bos taurus GN=SLMO2 PE=2 SV=1
Length = 194
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 95/127 (74%), Gaps = 2/127 (1%)
Query: 1 MNTAVKGIDVIDRKVE-NGILKSHRLISSQWGLPNWARSVVGSTNI-FYASERSEVNPIT 58
MN +V G+DV+DR ++ +G L SHRL+S++WGLP+ +S++G+ Y E S V+P+
Sbjct: 29 MNPSVVGVDVLDRHIDPSGKLHSHRLLSTEWGLPSIVKSIIGAARTKTYVQEHSVVDPVE 88
Query: 59 RQMTLETTNLTYGHVIAVDERLCYQPHPEDNSKTLLKQEAVVTVRGIPLSSYVENMLTSK 118
+ M L++TN+++ ++++VDERL Y+PHP+D KT+L QEA++TV+G+ L SY+E ++ S
Sbjct: 89 KTMELKSTNISFTNMVSVDERLIYKPHPQDPEKTILTQEAIITVKGVSLGSYLEGLMAST 148
Query: 119 ISHNAGK 125
IS NA K
Sbjct: 149 ISSNANK 155
>sp|Q6GM21|SLMO1_XENLA Protein slowmo homolog 1 OS=Xenopus laevis GN=slmo1 PE=2 SV=1
Length = 172
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 92/127 (72%), Gaps = 2/127 (1%)
Query: 1 MNTAVKGIDVIDRKVEN-GILKSHRLISSQWGLPNWARSVVG-STNIFYASERSEVNPIT 58
MN V G+DV+DR +++ G L S RL+ ++WGLP+ R+++G S + Y E S V+P+
Sbjct: 29 MNPCVVGVDVVDRNLDSQGRLHSQRLLCTEWGLPSLVRAILGTSRTLTYIKEHSVVDPVE 88
Query: 59 RQMTLETTNLTYGHVIAVDERLCYQPHPEDNSKTLLKQEAVVTVRGIPLSSYVENMLTSK 118
++M L +TN++ ++++VDERL Y PHPE+ +T+L QEA++TV+G+ LSSY+E ++ S
Sbjct: 89 KKMVLCSTNISLTNLVSVDERLVYTPHPENPEQTVLTQEAIITVKGVSLSSYLEGLMAST 148
Query: 119 ISHNAGK 125
IS NA K
Sbjct: 149 ISSNARK 155
>sp|Q8VE85|SLMO1_MOUSE Protein slowmo homolog 1 OS=Mus musculus GN=Slmo1 PE=2 SV=1
Length = 172
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 91/127 (71%), Gaps = 2/127 (1%)
Query: 1 MNTAVKGIDVIDRKVEN-GILKSHRLISSQWGLPNWARSVVGST-NIFYASERSEVNPIT 58
MN V G+DV++R V+ G L S RL+S++WGLP R+++G+ + Y ERS V+P
Sbjct: 29 MNPCVVGVDVLERSVDGCGRLHSLRLLSTEWGLPGLVRAILGANRTLTYIKERSVVDPAA 88
Query: 59 RQMTLETTNLTYGHVIAVDERLCYQPHPEDNSKTLLKQEAVVTVRGIPLSSYVENMLTSK 118
R+M L +TN+T ++++V+ERL Y PHPE+ KT+L QEA++TV+GI L SY+E+++ +
Sbjct: 89 RKMELCSTNITLTNLVSVNERLVYTPHPENPEKTVLTQEAIITVKGISLGSYLESLMATT 148
Query: 119 ISHNAGK 125
IS NA K
Sbjct: 149 ISSNAKK 155
>sp|Q96N28|SLMO1_HUMAN Protein slowmo homolog 1 OS=Homo sapiens GN=SLMO1 PE=2 SV=1
Length = 172
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 92/127 (72%), Gaps = 2/127 (1%)
Query: 1 MNTAVKGIDVIDRKVEN-GILKSHRLISSQWGLPNWARSVVG-STNIFYASERSEVNPIT 58
MN +V G+DV+ R+V+ G L S RL+S++WGLP+ R+++G S + Y E S V+P+
Sbjct: 29 MNPSVLGVDVLQRRVDGRGRLHSLRLLSTEWGLPSLVRAILGTSRTLTYIREHSVVDPVE 88
Query: 59 RQMTLETTNLTYGHVIAVDERLCYQPHPEDNSKTLLKQEAVVTVRGIPLSSYVENMLTSK 118
++M L +TN+T ++++V+ERL Y PHPE+ T+L QEA++TV+GI L SY+E+++ +
Sbjct: 89 KKMELCSTNITLTNLVSVNERLVYTPHPENPEMTVLTQEAIITVKGISLGSYLESLMANT 148
Query: 119 ISHNAGK 125
IS NA K
Sbjct: 149 ISSNAKK 155
>sp|Q54G07|SLMO_DICDI Protein slowmo homolog OS=Dictyostelium discoideum GN=slmo PE=3
SV=1
Length = 228
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 7 GIDVIDRKVE--NGILKSHRLISSQWGLPNWARSVVGSTN-IFYASERSEVNPITRQMTL 63
ID++ ++++ G+LK +LI + P+W +S++GS +FY E + V+P + MTL
Sbjct: 36 SIDILSKEIDPTTGVLKCTKLIICKGNTPSWLKSILGSGECLFY--EETTVDPKNKIMTL 93
Query: 64 ETTNLTYGHVIAVDERLCYQPHPEDNSKTLLKQEAVVTVRGIPLSSYVENMLTSKISHNA 123
+T NL + +++ VDE Y+ HP++ TL QEA VT ++ +E + NA
Sbjct: 94 KTKNLNFTNILGVDEVCTYEQHPDNEEWTLFTQEATVTSSIFGVARKMEAFCLDRFVANA 153
Query: 124 GK 125
GK
Sbjct: 154 GK 155
>sp|Q04006|UPS3_YEAST Protein UPS3, mitochondrial OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=UPS3 PE=1 SV=1
Length = 179
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 78/131 (59%), Gaps = 7/131 (5%)
Query: 1 MNTAVKGIDVIDRKV-ENG-ILKSHRLISSQWGLPNWARSVVGSTNIFYASERSEVNPIT 58
++T V +DV+ R++ E+G +L + RLI+ + P+W +VG+TN+ Y E S V+
Sbjct: 29 ISTHVIAVDVLRRELKEHGDVLLTERLITIRQNTPHWMSILVGNTNLAYVREVSTVDRRD 88
Query: 59 RQMTLETTNLTYGHVIAVDERLCYQPHPEDNSK-TLLKQEAVVTVRGIPLSSY---VENM 114
R +T+ + N+T+ H++ E + Y PHP++ S TL KQ+A + G+P ++ VEN
Sbjct: 89 RSLTMRSCNMTFPHILKCYETVRYVPHPKNPSNVTLFKQDAKF-LSGVPTKTFSEKVENW 147
Query: 115 LTSKISHNAGK 125
+ S NA K
Sbjct: 148 GVKRFSDNAVK 158
>sp|P35200|UPS2_YEAST Protein UPS2, mitochondrial OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=UPS2 PE=1 SV=1
Length = 230
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 1 MNTAVKGIDVIDRKVEN--GILKSHRLISSQWGLPNWARSVVGSTNIFYASERSEVNPIT 58
++T V +DV+ R++++ +L + RLI+ + G+P W ++G TN+ + E S V+
Sbjct: 29 ISTHVIAVDVLRRELKDQGKVLVTERLITVKQGVPKWIMMMLGGTNMSHVREVSVVDLNK 88
Query: 59 RQMTLETTNLTYGHVIAVDERLCYQPHPEDNS-KTLLKQEAVVTVRGI--PLSSYVENML 115
+ +T+ + NLT +++ V E + Y PHP+D++ KTL +QEA +T G L + +E+
Sbjct: 89 KSLTMRSCNLTMCNLLKVYETVTYSPHPDDSANKTLFQQEAQITAYGSIRKLCNKMEDWS 148
Query: 116 TSKISHNAGK 125
+ NA K
Sbjct: 149 VQRFCENAKK 158
>sp|O59707|UPS2_SCHPO UPS-like protein C36.10 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPBC36.10 PE=3 SV=1
Length = 184
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 3 TAVKGIDVIDRKV-ENGILKSHRLISSQWGLPNWARSVVGSTNIFYASERSEVNPITRQM 61
T V +D +DRKV +NG+L + RLI+ LP W ++ Y E S V+ R +
Sbjct: 31 THVIAVDTLDRKVLDNGVLYTERLITCHQALPRWILKLIDGAQDCYIRETSYVDLKARTL 90
Query: 62 TLETTNLTYGHVIAVDERLCYQPHPEDNSKTLLKQEAVV 100
TL T+NLT+ + VDE + Y PHPE + T+ +QEA +
Sbjct: 91 TLLTSNLTFSDRLRVDETVTYSPHPELEA-TVFQQEARI 128
>sp|Q90673|PRLD1_CHICK PRELI domain-containing protein 1, mitochondrial OS=Gallus gallus
GN=PRELID1 PE=2 SV=1
Length = 215
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Query: 9 DVIDRKV-ENGILKSHRLISSQWGLPNWARSVVGS--TNIFYASERSEVNPITRQMTLET 65
D++ R+V + L S RL++ +P WA + + Y E S V+P R MT T
Sbjct: 38 DIVHREVTADHKLLSRRLLTKTNRMPRWAERFFPANVAHNVYIVEDSIVDPKNRTMTTFT 97
Query: 66 TNLTYGHVIAVDERLCYQPHPEDNSKTLLKQEAVVTVRGIPLSSYVENMLTSKISHNAGK 125
N+ + ++AV+ER Y+ +PE++S T +K+EA V+ +S V+ ++ N K
Sbjct: 98 WNINHARLMAVEERCVYRVNPENSSWTEVKREAWVSSSLFGVSRAVQEFGLARFKSNVTK 157
>sp|Q9UT07|UPS1_SCHPO Protein ups1 homolog OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPAP8A3.10 PE=3 SV=1
Length = 171
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 5 VKGIDVIDRKVEN-GILKSHRLISSQWGLPNWARSVVGSTNIFYASERSEVNPITRQMTL 63
V DV++R V++ G L + RL+ Q LP WA ++ N Y ERS ++P +++
Sbjct: 34 VVSADVLERYVDDEGRLYTERLLVKQGRLPRWASDLLN-VNKSYILERSVIDPSKQELKS 92
Query: 64 ETTNLTYGHVIAVDERLCYQPHPEDNSKTLL 94
ET NL + ++ V E + E+ SKT++
Sbjct: 93 ETFNLDHVKILRVIEYSRFIQSSENCSKTIV 123
>sp|Q32KN9|PRLD1_BOVIN PRELI domain-containing protein 1, mitochondrial OS=Bos taurus
GN=PRELID1 PE=2 SV=1
Length = 219
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 61/120 (50%), Gaps = 3/120 (2%)
Query: 9 DVIDRKV-ENGILKSHRLISSQWGLPNWARSVVGS--TNIFYASERSEVNPITRQMTLET 65
D++ R+V + L S RL++ +P WA + + + Y E S V+P + MT T
Sbjct: 38 DIVHREVTSDQKLLSRRLLTKTNRMPRWAERLFPANVAHSVYILEDSIVDPQNQTMTTFT 97
Query: 66 TNLTYGHVIAVDERLCYQPHPEDNSKTLLKQEAVVTVRGIPLSSYVENMLTSKISHNAGK 125
N+ + ++ V+ER Y+ + +++ T +++EA V+ +S V+ ++ N K
Sbjct: 98 WNINHARLMVVEERCVYRVNSDNSGWTEIRREAWVSSSLFGVSRAVQEFGLARFKSNVTK 157
>sp|Q9Y255|PRLD1_HUMAN PRELI domain-containing protein 1, mitochondrial OS=Homo sapiens
GN=PRELID1 PE=2 SV=1
Length = 219
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 9 DVIDRKVE-NGILKSHRLISSQWGLPNWARSVVGS--TNIFYASERSEVNPITRQMTLET 65
D++ R+V + L S RL++ +P WA + + + Y E S V+P + MT T
Sbjct: 38 DIVHREVTPDQKLLSRRLLTKTNRMPRWAERLFPANVAHSVYVLEDSIVDPQNQTMTTFT 97
Query: 66 TNLTYGHVIAVDERLCYQPHPEDNSKTLLKQEAVVTVRGIPLSSYVENMLTSKISHNAGK 125
N+ + ++ V+ER Y + +++ T +++EA V+ +S V+ ++ N K
Sbjct: 98 WNINHARLMVVEERCVYCVNSDNSGWTEIRREAWVSSSLFGVSRAVQEFGLARFKSNVTK 157
>sp|Q8R107|PRLD1_MOUSE PRELI domain-containing protein 1, mitochondrial OS=Mus musculus
GN=Prelid1 PE=2 SV=1
Length = 217
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 9 DVIDRKVE-NGILKSHRLISSQWGLPNWARSVVGS--TNIFYASERSEVNPITRQMTLET 65
D++ R+V + L S RL++ +P WA + + + Y E S V+P + MT T
Sbjct: 38 DIVHREVTPDQKLLSRRLLTKTNRMPRWAERLFPANVAHSVYILEDSIVDPQNQTMTTFT 97
Query: 66 TNLTYGHVIAVDERLCYQPHPEDNSKTLLKQEAVVTVRGIPLSSYVENMLTSKISHNAGK 125
N+ + ++ V+ER Y + +++ T +++EA V+ +S V+ ++ N K
Sbjct: 98 WNINHARLMVVEERCVYCVNSDNSGWTEIRREAWVSSSLFGVSRAVQEFGLARFKSNVTK 157
>sp|Q05776|UPS1_YEAST Protein UPS1, mitochondrial OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=UPS1 PE=1 SV=1
Length = 175
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 1/122 (0%)
Query: 5 VKGIDVIDRKVEN-GILKSHRLISSQWGLPNWARSVVGSTNIFYASERSEVNPITRQMTL 63
V ID I R V+ G L++ RL+ LP W + + + E S VNP M
Sbjct: 34 VLSIDTISRNVDQEGNLRTTRLLKKSGKLPTWVKPFLRGITETWIIEVSVVNPANSTMKT 93
Query: 64 ETTNLTYGHVIAVDERLCYQPHPEDNSKTLLKQEAVVTVRGIPLSSYVENMLTSKISHNA 123
T NL + ++ V+E YQ +S + + + + S VE+ +K N
Sbjct: 94 YTRNLDHTGIMKVEEYTTYQFDSATSSTIADSRVKFSSGFNMGIKSKVEDWSRTKFDENV 153
Query: 124 GK 125
K
Sbjct: 154 KK 155
>sp|Q92503|S14L1_HUMAN SEC14-like protein 1 OS=Homo sapiens GN=SEC14L1 PE=1 SV=2
Length = 715
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Query: 33 PNWARSVVGSTNIFYASERSEVNPITRQMTLETTNLTYGHVIAVDERLCYQPHPEDNSKT 92
P + + G +++ + S +N R + +E N T+ + + ++E CY HPE+ T
Sbjct: 66 PRLLKKIAGVDYVYFVQKNS-LNSRERTLHIEAYNETFSNRVIINEHCCYTVHPENEDWT 124
Query: 93 LLKQEAVVTVRG-IPLSSYVENMLTSKISHNAGK 125
+Q A + ++ S VE + + + N K
Sbjct: 125 CFEQSASLDIKSFFGFESTVEKIAMKQYTSNIKK 158
>sp|Q9V579|PREL_DROME Protein preli-like OS=Drosophila melanogaster GN=prel PE=2 SV=3
Length = 236
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 3/117 (2%)
Query: 9 DVIDRKVENGILKSHRLISSQWGLPNWARSVVGSTNIFYASERSEVNPITRQMTLETTNL 68
D I R+V +G L S RL+S +P W + + E S ++P+ + T T NL
Sbjct: 41 DTIQREVRDGKLFSRRLLSKTNPVPKWGARFYNNVPV-KIVEDSVLDPVKKTFTTFTRNL 99
Query: 69 TYGHVIAVDERLCYQPHPEDNSKTLLKQEAVVTVRGIPLSSYVENMLTSKISHNAGK 125
++ VDE + Y + + TL + A ++ + S + + N K
Sbjct: 100 GMTKIMKVDEIVVYS--EQKDGSTLAVRRAYISSQVFGFSRAIRAFGIERFKANGNK 154
>sp|Q5BKH5|PRLD2_XENTR PRELI domain-containing protein 2 OS=Xenopus tropicalis GN=prelid2
PE=2 SV=1
Length = 176
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 6/126 (4%)
Query: 5 VKGIDVIDRKVE--NGILKSHRLISSQWGLPNWAR--SVVGSTNIFYASERSEVNPITRQ 60
V + ++ K + G++ R+ + +P++ R S++ +N+ Y E S ++ TR
Sbjct: 34 VLSVKTVEEKTDPATGVVYRKRIATCNNVIPSFLRRCSILKVSNV-YLEEESWLDMKTRV 92
Query: 61 MTLETTNLTYGHVIAVDERLCYQPHPEDNSKTLLKQEAVVTVRGIP-LSSYVENMLTSKI 119
MTLET LT+ + E Y+ E+++ T Q+ +T+ G L+ +E + +
Sbjct: 93 MTLETHCLTWAQYATMKEESVYKECTENSNWTEFTQKGTITITGAGFLNRVLETFAQTFL 152
Query: 120 SHNAGK 125
SH K
Sbjct: 153 SHGVKK 158
>sp|Q03606|YN02_CAEEL CRAL-TRIO domain-containing protein T23G5.2 OS=Caenorhabditis
elegans GN=T23G5.2 PE=4 SV=3
Length = 719
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 13/117 (11%)
Query: 10 VIDRKVENGILKSHRLISSQWGLPNWARSVVGSTNIFYASERSEVNPITRQMTLETTNLT 69
VIDRK + + P + + G +++ S+++ ++ R + +E TN++
Sbjct: 54 VIDRKCQLNV-----------EAPYLVKKIAGVDYVYF-SQKNSLDRRKRTLDIEATNIS 101
Query: 70 YGHVIAVDERLCYQPHPEDNSKTLLKQEAVVTVRG-IPLSSYVENMLTSKISHNAGK 125
+ I V E Y H E+ + T +Q A + V+ L S VE + + N K
Sbjct: 102 FSSRINVKENCTYYVHAENENWTCFEQSASLDVKNFFGLESAVEKLAVRQYGANLAK 158
>sp|Q6NTS7|PRLD2_XENLA PRELI domain-containing protein 2 OS=Xenopus laevis GN=prelid2 PE=2
SV=1
Length = 176
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 5 VKGIDVIDRKVE--NGILKSHRLISSQWGLPNWAR--SVVGSTNIFYASERSEVNPITRQ 60
V I ++ K + +G++ R+ + +P++ + S++ +N+ Y E S ++ T+
Sbjct: 34 VLAIKTVEEKTDPASGVVYRKRIATCNNVIPSFLQRFSILKVSNV-YLEEESWLDMKTKV 92
Query: 61 MTLETTNLTYGHVIAVDERLCYQPHPEDNSKTLLKQEAVVTVRG 104
MTL++ LT+ + E Y+ E+++ T Q VT+ G
Sbjct: 93 MTLKSRCLTWAQYATMKEESVYKESIENSNWTEFTQRGTVTITG 136
>sp|P20748|YO11_ADEG1 Uncharacterized protein ORF11 OS=Fowl adenovirus A serotype 1
(strain CELO / Phelps) GN=11 PE=4 SV=1
Length = 135
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
Query: 51 RSEVNPITRQMTLETTNLTYGHVIAVDERLCYQPHPEDNSKTLLKQEAVVTVRGIPLSSY 110
RSE NP +T+ H + ++ Y H E+N T V V+G+ L +Y
Sbjct: 75 RSEFNPTKHNLTI--------HNASYEDSGTYSLHQEENDGTEHTDNFKVIVQGMSLYTY 126
Query: 111 VENMLTSKI 119
++ L S I
Sbjct: 127 LQYALISPI 135
>sp|Q9FPS3|UBP24_ARATH Ubiquitin carboxyl-terminal hydrolase 24 OS=Arabidopsis thaliana
GN=UBP24 PE=1 SV=1
Length = 551
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 18 GILKSHRLISSQWGLPNWARSVVGSTNIFYASERSEVNPITRQMTLETTNLTYG 71
GI + L S+Q L + SV G T + AS+ ++ +++ M L +YG
Sbjct: 406 GIEDALHLFSAQEDLEGYRASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYG 459
>sp|Q6A025|PPR26_MOUSE Protein phosphatase 1 regulatory subunit 26 OS=Mus musculus
GN=Ppp1r26 PE=2 SV=2
Length = 1163
Score = 29.3 bits (64), Expect = 7.6, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 55 NPITRQMTLETTNLTYGHVIAVDERLCYQPHPEDNSKTLLKQEAVVTVRGIPLSSYVE 112
+P++R +T +L GH A E +C D S L+ EA++ + L + +E
Sbjct: 409 DPLSRLLTDSRASLPPGHAAAKSEAVCQASRLADTSTELMCAEAILDISKTILPAPME 466
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.129 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,473,082
Number of Sequences: 539616
Number of extensions: 1532536
Number of successful extensions: 2172
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2123
Number of HSP's gapped (non-prelim): 31
length of query: 125
length of database: 191,569,459
effective HSP length: 92
effective length of query: 33
effective length of database: 141,924,787
effective search space: 4683517971
effective search space used: 4683517971
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)