Query psy14449
Match_columns 673
No_of_seqs 421 out of 1871
Neff 6.1
Searched_HMMs 29240
Date Fri Aug 16 20:08:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14449.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14449hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qe7_A Uracil permease; uracil 100.0 1.3E-61 4.4E-66 533.8 20.1 375 180-621 3-415 (429)
2 3qe7_A Uracil permease; uracil 98.9 3.1E-10 1.1E-14 124.9 1.4 241 10-326 85-379 (429)
3 1z65_A PRPLP, prion-like prote 5.6 1.3E+02 0.0046 20.3 0.1 12 76-87 10-21 (30)
4 2j7a_A Cytochrome C nitrite re 4.6 2.3E+02 0.0078 31.4 1.1 18 651-668 469-486 (500)
5 3hd6_A Ammonium transporter RH 4.3 4.6E+02 0.016 28.9 3.2 35 596-630 409-447 (490)
6 1oah_A Cytochrome C nitrite re 4.2 2.2E+02 0.0075 31.7 0.6 18 651-668 493-510 (519)
7 2lor_A Transmembrane protein 1 5.0 2.3E+02 0.008 24.7 0.0 10 401-410 55-64 (108)
8 3b9w_A Ammonium transporter fa 3.1 7.3E+02 0.025 26.6 3.4 42 588-629 322-365 (407)
9 1bts_A BAND 3 anion transport 2.9 1.2E+03 0.041 15.1 3.0 20 233-252 3-22 (26)
10 3j1r_A Archaeal adhesion filam 2.8 1.2E+03 0.04 15.3 2.7 13 523-535 3-15 (26)
No 1
>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli}
Probab=100.00 E-value=1.3e-61 Score=533.77 Aligned_cols=375 Identities=23% Similarity=0.383 Sum_probs=326.8
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCchhhHHHHHHHHHHHHHHHHHHHh-cCCC---c
Q psy14449 180 DITYGIDDVPPWYLCIFMALQHYLTMIGAIVSIPFILTPALCMREDDPARGHIISTMIFVTAIVTFIQNTF-GCRT---M 255 (673)
Q Consensus 180 ~l~y~v~~~ppw~~~i~lGlQh~lam~~~~vv~Plil~~algl~~~~~~~~~lIs~~i~~sGI~TLLq~lf-G~rL---~ 255 (673)
++.|++||++||++++++|+||+++|+++++++|+++ |+ |+ +++++++|++|++|+++ |.|+ +
T Consensus 3 ~~~~~~~~~~~~~~~i~~GlQh~lam~~~~v~~Plil----Gl--~~-------~~~l~~agi~Tllq~~~~~~~lP~~~ 69 (429)
T 3qe7_A 3 RRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLF----HI--NP-------ATVLLFNGIGTLLYLFICKGKIPAYL 69 (429)
T ss_dssp -CCBCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT----TS--CH-------HHHHHHHHHHHHHHHHHTTTCCCCCE
T ss_pred CcccCcccCCCHHHHHHHHHHHHHHHHHHHHHhHHHh----CC--CH-------HHHHHHHHHHHHHHHHHcCCCCCeEe
Confidence 4579999999999999999999999999999999998 33 31 48999999999999997 6776 8
Q ss_pred ccchHH----------HHHHH-HH--HH-----HHHHH--hHH-HHHHHhhCCcchhhHHHHhhhhhHHHHHHhhh----
Q psy14449 256 GHTYSE----------SLRSA-GY--VG-----WFSPS--GVV-GVLLKYVTPLTIVPTVSLVGLSLFENAAEAAS---- 310 (673)
Q Consensus 256 G~Sfa~----------~~~~i-Ga--Va-----ilg~~--gl~-g~l~~~~pPlvig~~I~lIGLsl~~~~~~~~~---- 310 (673)
|+||+. +++.+ |+ ++ +++++ ++. +++.|+|||+++|++++++|+++.+.+..+.+
T Consensus 70 G~sfafi~~~~~i~~~g~~~~~gavi~aGli~ill~~~~~~~g~~~l~~~~PpvviG~~i~~IGl~l~~~~~~~~~~~~~ 149 (429)
T 3qe7_A 70 GSSFAFISPVLLLLPLGYEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPA 149 (429)
T ss_dssp EECGGGHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTTCSHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHTSSCB
T ss_pred cChHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCCeeeHHHHHHHHHHHHHHHHHhccccCC
Confidence 999884 34555 65 33 44443 222 68999999999999999999999999887653
Q ss_pred -------ccccchhhhhHHHHHHhhhccccccCccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHhhhcccCCCCC
Q psy14449 311 -------KHWGISVSTIIMLTVFSQCLSEVKVPGINYSKEEGFKIVWFNLFKLFPVLLTIMIMWGICGLLTLTEALPKGH 383 (673)
Q Consensus 311 -------~~~~Ia~~sl~lil~~~~yl~~~~~p~p~~~~~~~~~~~~~~~~~~~avLigiiigwl~a~iLg~~~~~p~~~ 383 (673)
.++.+++++++++++++++.| +++|++++|+|++++|++++.+|..|+
T Consensus 150 ~~~~~~~~~~~la~~tl~iii~~~~~~k--------------------g~~~~~aiLigivvg~~~a~~~G~~d~----- 204 (429)
T 3qe7_A 150 EGQTPDSKTIIISITTLAVTVLGSVLFR--------------------GFLAIIPILIGVLVGYALSFAMGIVDT----- 204 (429)
T ss_dssp TTBCCCHHHHHHHHHHHHHHHHHHHSSS--------------------TTTTTHHHHHHHHHHHHHHHHHHHTTS-----
T ss_pred CCccccHHHHHHHHHHHHHHHHHHHHhc--------------------ccchhhHHHHHHHHHHHHHHHhcCCCc-----
Confidence 467899999999998887655 567889999999999999999998765
Q ss_pred CCccccccccccCCCcccccccccccccccccchHHHHHHHHHHhhccccchHHHHhchhCCCCCCCcccccchhhhhhH
Q psy14449 384 PARTDVKLRILEDSSWFRVPYPGQWGTPTVSLSGVLGMLAGVLACTVESISYYPTTSKMCGAPPPPVHAINRGIAIEGLG 463 (673)
Q Consensus 384 ~~rtd~~~~~i~~apw~~~P~p~~~g~P~f~~~~v~~~~~~~lv~~vESiG~~~a~a~~~g~~~~~~~~i~Rgi~~dGig 463 (673)
+.+.++||+++|. |+.|+||+..+..++..++++++||+||+.++++.++++.++++++||++.+||++
T Consensus 205 --------~~v~~a~~~~lP~---~~~P~f~~~~i~~i~~i~lV~~~Eslg~~~av~~~~g~~~~~~~~~~r~l~adGla 273 (429)
T 3qe7_A 205 --------TPIINAHWFALPT---LYTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLS 273 (429)
T ss_dssp --------SHHHHSCSSCCCC---CCCCCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCTCCCCCHHHHHHHHHHH
T ss_pred --------ccccccccccccC---CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHH
Confidence 4567789999995 57789999999999999999999999999999999987765678999999999999
Q ss_pred HHHhhhcCCCCCccccccccceecccccccceehhHHHHHHHHHHHhhHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHh
Q psy14449 464 TVLAGLWGSGNGTNTFGENVGAIGVTKVGSRRVIQYACALMLLQGIINKFGAVFIIIPEPVVGGIFCVMFGMIAAFGLSA 543 (673)
Q Consensus 464 silaGl~Gtg~g~Tt~seN~G~i~~Tgv~SR~vi~~aa~~li~lg~~pKf~al~asIP~pViggvl~v~fg~i~~~Gls~ 543 (673)
|+++|+||+ +|+|+|+||+|+++.||++||++.+++|+++++++++||+++++++||.||+||+.+++||++..+|+|+
T Consensus 274 ~i~~glfGg-~p~Tt~~en~g~i~~tg~~sr~~~~~ag~~lillgl~pk~~al~~~IP~~vlgg~~l~lfg~i~~~Gi~~ 352 (429)
T 3qe7_A 274 TVISGFFGS-TPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRV 352 (429)
T ss_dssp HHHHHHHTC-CCEEECHHHHHHHHHHTBCCHHHHHHHHHHHHHHTCCHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCC-CCcchHHHhHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999995 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred h--hhccCCCCcceEEEehhhhhhhhhhhHhhhccccccccccchhHHHHHHhccchhHHHHHHHHHhhcCCCCCccccc
Q psy14449 544 L--QYVDLNSSRNLYIIGFSMFFSLVLPKWMVHNADAIRTGSDIVDSILTVLLSTSILVGGMLGCLLDNLIPGTPEERGL 621 (673)
Q Consensus 544 L--~~vdl~s~Rn~~IvG~sl~~Gl~~P~~~~~~p~~~~tg~~~l~~~l~~llss~~~vg~l~aiiLd~~~p~t~~erg~ 621 (673)
+ +++|++++||++|+|+|+++|++.- ..| ++.++.||+.+|+++|++||+++|+++++|+-
T Consensus 353 l~~~~v~~~~~rn~~i~~~~l~~G~g~~----~~~-------------~~~~~~~gi~~~~~~ai~ln~~l~~~~~~~~~ 415 (429)
T 3qe7_A 353 LIESKVDYNKAQNLILTSVILIIGVSGA----KVN-------------IGAAELKGMALATIVGIGLSLIFKLISVLRPE 415 (429)
T ss_dssp HHHTTSCTTSHHHHHHHHHHHHHHHHCC----CCC-------------SSSCCCCHHHHHHHHHHHHHHHHTCCC-----
T ss_pred HHhcCCCCCCcchhHHHHHHHHHHHHHH----HHh-------------hhhhccCcHHHHHHHHHHHHHHhcCccccCCc
Confidence 9 9999999999999999999999851 112 13477899999999999999999987766663
No 2
>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli}
Probab=98.87 E-value=3.1e-10 Score=124.94 Aligned_cols=241 Identities=18% Similarity=0.218 Sum_probs=152.3
Q ss_pred HHhhhcCCCeeeeehh----hhH------HhHhhhccCceeeceeehhcccchHhHHHhhc-----------cceeeehh
Q psy14449 10 LNMENLDPPGTVHSSV----SVV------GVLLKYVTPLTIVPTVSLVGLSLFENAAEAAS-----------KHWGISSL 68 (673)
Q Consensus 10 ~~m~~~~g~~~~~~~~----g~~------g~~~r~i~Pl~i~P~v~l~gl~l~~~~~~~~~-----------~~w~i~~~ 68 (673)
+.+++..|+.++++++ |+. +++.|++.|+++.++++++||++.+.+.+.++ ++|.+++
T Consensus 85 ~g~~~~~gavi~aGli~ill~~~~~~~g~~~l~~~~PpvviG~~i~~IGl~l~~~~~~~~~~~~~~~~~~~~~~~~la~- 163 (429)
T 3qe7_A 85 LGYEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTIIISI- 163 (429)
T ss_dssp GCHHHHHHHHHHHHHHHHHHHHHHHTTCSHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHTSSCBTTBCCCHHHHHHHH-
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCCeeeHHHHHHHHHHHHHHHHHhccccCCCCccccHHHHHHHH-
Confidence 6788999999999975 443 47999999999999999999999999998765 3555665
Q ss_pred hhhccchhhhhhhhhhhhccCCcccCCcccccCCCceEEeeccccccceehccccCCCCCCCcccccCCCCCccccccch
Q psy14449 69 RQKILYFSTIIMLTVFSQCLSEVKLPGINYSKEEGFKIVWFNLFKLFPVLGLVDQNGHSKSSEKIEDRPDITYGIDDVPP 148 (673)
Q Consensus 69 ~~~~~~~~~~~l~vlfsqyl~~~~~p~~~~~~~~~~~~~~~~~f~~fpvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (673)
.+++++++++++.|+. +|++|+| +++++.
T Consensus 164 -------~tl~iii~~~~~~kg~--------------------~~~~aiL------------------------igivvg 192 (429)
T 3qe7_A 164 -------TTLAVTVLGSVLFRGF--------------------LAIIPIL------------------------IGVLVG 192 (429)
T ss_dssp -------HHHHHHHHHHHSSSTT--------------------TTTHHHH------------------------HHHHHH
T ss_pred -------HHHHHHHHHHHHhccc--------------------chhhHHH------------------------HHHHHH
Confidence 5899999998876543 6788999 889999
Q ss_pred hHHHHHhhhhhccccCCCCCCCCCcccCCCCCcccccCC--CCChHHHHHHHHHHHHHHHHHHHHH-------HHHhhhc
Q psy14449 149 WYLCIFMALQVLGLVDQNGHSKSSEKIEDRPDITYGIDD--VPPWYLCIFMALQHYLTMIGAIVSI-------PFILTPA 219 (673)
Q Consensus 149 w~~~~~lt~~~~~~~~~~~~~~~~~~r~~~~~l~y~v~~--~ppw~~~i~lGlQh~lam~~~~vv~-------Plil~~a 219 (673)
|+++..+. ..+..+ .. +..|+.+++ .|.+- .+..+.|+...++. -..+++.
T Consensus 193 ~~~a~~~G--~~d~~~---------v~---~a~~~~lP~~~~P~f~------~~~i~~i~~i~lV~~~Eslg~~~av~~~ 252 (429)
T 3qe7_A 193 YALSFAMG--IVDTTP---------II---NAHWFALPTLYTPRFE------WFAILTILPAALVVIAEHVGHLVVTANI 252 (429)
T ss_dssp HHHHHHHH--HTTSSH---------HH---HSCSSCCCCCCCCCCC------HHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhc--CCCccc---------cc---ccccccccCCCCCccc------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999987 332210 00 001122221 11111 11111221111111 1112222
Q ss_pred ccCCCCCchhhHHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHH---HH-------HH-----HHHHHhHHHHHHHh
Q psy14449 220 LCMREDDPARGHIISTMIFVTAIVTFIQNTFGCRTMGHTYSESLRSA---GY-------VG-----WFSPSGVVGVLLKY 284 (673)
Q Consensus 220 lgl~~~~~~~~~lIs~~i~~sGI~TLLq~lfG~rL~G~Sfa~~~~~i---Ga-------Va-----ilg~~gl~g~l~~~ 284 (673)
. +.+ .++.+-++|.+.+.|++|++.++||.- ..++|+|+...+ |+ .+ +++++++++.+...
T Consensus 253 ~--g~~-~~~~~~~~r~l~adGla~i~~glfGg~-p~Tt~~en~g~i~~tg~~sr~~~~~ag~~lillgl~pk~~al~~~ 328 (429)
T 3qe7_A 253 V--KKD-LLRDPGLHRSMFANGLSTVISGFFGST-PNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQM 328 (429)
T ss_dssp H--TSC-TCCCCCHHHHHHHHHHHHHHHHHHTCC-CEEECHHHHHHHHHHTBCCHHHHHHHHHHHHHHTCCHHHHHHHTT
T ss_pred h--CCC-CCCCCCcchHHHHHHHHHHHHHhcCCC-CcchHHHhHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 111 112334789999999999999999974 567788754322 11 11 44555556666777
Q ss_pred hC-Ccchhh------HHHHhhhhhH--HHHHHhhhccccchhhhhHHHHHH
Q psy14449 285 VT-PLTIVP------TVSLVGLSLF--ENAAEAASKHWGISVSTIIMLTVF 326 (673)
Q Consensus 285 ~p-Plvig~------~I~lIGLsl~--~~~~~~~~~~~~Ia~~sl~lil~~ 326 (673)
+| |+..|. ++...|++.+ +..+.+..||..+..+++.+.+..
T Consensus 329 IP~~vlgg~~l~lfg~i~~~Gi~~l~~~~v~~~~~rn~~i~~~~l~~G~g~ 379 (429)
T 3qe7_A 329 IPLPVMGGVSLLLYGVIGASGIRVLIESKVDYNKAQNLILTSVILIIGVSG 379 (429)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTSHHHHHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHH
Confidence 77 443333 3456666666 444444568999988888887754
No 3
>1z65_A PRPLP, prion-like protein doppel, doppelganger; transmembrane helix, DHPC, mouse doppel, unknown function; NMR {Synthetic}
Probab=5.60 E-value=1.3e+02 Score=20.31 Aligned_cols=12 Identities=17% Similarity=0.235 Sum_probs=9.3
Q ss_pred hhhhhhhhhhhc
Q psy14449 76 STIIMLTVFSQC 87 (673)
Q Consensus 76 ~~~~l~vlfsqy 87 (673)
..++.+.+|||.
T Consensus 10 lai~c~LLfs~L 21 (30)
T 1z65_A 10 VAILCMLLASHL 21 (30)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHhhH
Confidence 377788899984
No 4
>2j7a_A Cytochrome C nitrite reductase NRFA; cytochrome C nitrite reductase, NRFA, NAPC/NIRT family, membrane complex, oxidoreductase; HET: HEM LMT; 2.3A {Desulfovibrio vulgaris} PDB: 2vr0_A*
Probab=4.58 E-value=2.3e+02 Score=31.37 Aligned_cols=18 Identities=28% Similarity=0.827 Sum_probs=15.5
Q ss_pred cccccccceeeecCCcCC
Q psy14449 651 TLRRWKWTSYIPFMPTYH 668 (673)
Q Consensus 651 ~~~~~~~~~~~p~~p~~~ 668 (673)
.+..++|++|||.+|+-+
T Consensus 469 ~~~~~~~~~~~~~~~~~~ 486 (500)
T 2j7a_A 469 FMKTHKWFQYLPVLPKAD 486 (500)
T ss_dssp GGGSSGGGGGSCCCCCCC
T ss_pred HHhcCcHHHhccCCCchh
Confidence 567899999999999764
No 5
>3hd6_A Ammonium transporter RH type C; ammonia, channel, rhesus, glycoprotein, membran structural genomics, PSI-2, protein structure initiative; HET: BOG; 2.10A {Homo sapiens}
Probab=4.29 E-value=4.6e+02 Score=28.90 Aligned_cols=35 Identities=14% Similarity=0.091 Sum_probs=26.0
Q ss_pred cchhHHHHHHHHHhhcCC----CCCcccccccccccccc
Q psy14449 596 TSILVGGMLGCLLDNLIP----GTPEERGLVAWGEQMKL 630 (673)
Q Consensus 596 s~~~vg~l~aiiLd~~~p----~t~~erg~~~w~~~~~~ 630 (673)
-....+.++..+||.+.. .++|.+|+..||-.++.
T Consensus 409 ~a~v~~~ii~~iLk~~~~lRvs~e~e~~g~d~we~p~~~ 447 (490)
T 3hd6_A 409 MALMGGIIVGLILRLPFWGQPSDENCFEDAVYWEMPEGN 447 (490)
T ss_dssp HHHHHHHHHHHHHTSTTSCCCCTTSTTCGGGTSCCCTTT
T ss_pred HHHHHHHHHHHHHhhccCCCCCHHHHhCCCceeecCccc
Confidence 456778889999998764 35677899999775443
No 6
>1oah_A Cytochrome C nitrite reductase; nitrogen cycle, respiratory nitrite ammonification; HET: HEM; 2.3A {Desulfovibrio desulfuricans} SCOP: a.138.1.3
Probab=4.23 E-value=2.2e+02 Score=31.67 Aligned_cols=18 Identities=28% Similarity=0.650 Sum_probs=15.5
Q ss_pred cccccccceeeecCCcCC
Q psy14449 651 TLRRWKWTSYIPFMPTYH 668 (673)
Q Consensus 651 ~~~~~~~~~~~p~~p~~~ 668 (673)
.+..++|++|||.+|+-+
T Consensus 493 ~~~~~~~~~~~~~~~~~~ 510 (519)
T 1oah_A 493 FLKQNPWTRLLPALPKAE 510 (519)
T ss_dssp HHTTSTTGGGSCCCCCCC
T ss_pred HHhhCcHHHhccCCCchh
Confidence 567899999999999764
No 7
>2lor_A Transmembrane protein 141; helical bundle; NMR {Homo sapiens}
Probab=4.97 E-value=2.3e+02 Score=24.73 Aligned_cols=10 Identities=50% Similarity=1.245 Sum_probs=8.3
Q ss_pred cccccccccc
Q psy14449 401 RVPYPGQWGT 410 (673)
Q Consensus 401 ~~P~p~~~g~ 410 (673)
++|||+||..
T Consensus 55 klpYp~qwni 64 (108)
T 2lor_A 55 KFPYPLQWSL 64 (108)
Confidence 5799999975
No 8
>3b9w_A Ammonium transporter family; membrane protein, ammonia transport, rhesus protein, transpo protein; HET: BOG; 1.30A {Nitrosomonas europaea} PDB: 3bhs_A 3b9y_A* 3b9z_A*
Probab=3.12 E-value=7.3e+02 Score=26.56 Aligned_cols=42 Identities=7% Similarity=0.039 Sum_probs=27.0
Q ss_pred HHHHHHhc--cchhHHHHHHHHHhhcCCCCCccccccccccccc
Q psy14449 588 SILTVLLS--TSILVGGMLGCLLDNLIPGTPEERGLVAWGEQMK 629 (673)
Q Consensus 588 ~~l~~lls--s~~~vg~l~aiiLd~~~p~t~~erg~~~w~~~~~ 629 (673)
|++..+.. -...++.++..++|.-.+.++|.+|-..|+-++.
T Consensus 322 Ql~g~~~~~~~s~v~~~i~~~il~~r~~~e~e~~g~~~we~p~l 365 (407)
T 3b9w_A 322 QLTGIGITLALALIGGVIAGALIKLTGTTKQAYEDSHEFIHLAG 365 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCGGGTSSSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHcCCcccccCccc
Confidence 44444332 3467788888999984445666678777876543
No 9
>1bts_A BAND 3 anion transport protein; transmembrane protein; NMR {Homo sapiens} SCOP: j.35.1.1 PDB: 1btt_A
Probab=2.90 E-value=1.2e+03 Score=15.13 Aligned_cols=20 Identities=20% Similarity=0.416 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHHhcC
Q psy14449 233 ISTMIFVTAIVTFIQNTFGC 252 (673)
Q Consensus 233 Is~~i~~sGI~TLLq~lfG~ 252 (673)
++.+++.++++-++.++|+.
T Consensus 3 v~E~i~s~ai~Gi~f~lf~g 22 (26)
T 1bts_A 3 VSELLISTAVQGILFALLGA 22 (26)
T ss_dssp HHHHHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHHHHHHHhc
Confidence 35677788888888887764
No 10
>3j1r_A Archaeal adhesion filament core; helical polymer, flagellar filament, cell adhesion, structur protein; 7.50A {Ignicoccus hospitalis}
Probab=2.80 E-value=1.2e+03 Score=15.27 Aligned_cols=13 Identities=15% Similarity=0.662 Sum_probs=5.8
Q ss_pred hhHHHHHHHHHHH
Q psy14449 523 PVVGGIFCVMFGM 535 (673)
Q Consensus 523 pViggvl~v~fg~ 535 (673)
|+++.+++++.+.
T Consensus 3 piVA~~lLIviav 15 (26)
T 3j1r_A 3 PVIATLLLILIAV 15 (26)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 4444444444333
Done!