BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy14454
         (117 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q3URD3|SLMAP_MOUSE Sarcolemmal membrane-associated protein OS=Mus musculus GN=Slmap
           PE=1 SV=2
          Length = 845

 Score = 32.3 bits (72), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 34/60 (56%)

Query: 21  SNAKLLIERLERTQRQEAARSQAELGSYKQRLDRADADLLHSRKENIRLTEQIANIEKEL 80
           S+ +L  ++ E  QR+EA R Q EL   K+  D  + +    +KEN+ L+ ++   EKEL
Sbjct: 652 SSFQLRCQQCEDQQREEATRLQGELEKLKKEWDVLETECHSLKKENVLLSSELQRQEKEL 711


>sp|B0SRF2|GRPE_LEPBP Protein GrpE OS=Leptospira biflexa serovar Patoc (strain Patoc 1
          / ATCC 23582 / Paris) GN=grpE PE=3 SV=1
          Length = 190

 Score = 30.4 bits (67), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 12/70 (17%)

Query: 14 ESLEQELSNAKLLIERLERTQRQEAARSQAELGSYKQRLDRADADLLHSRKENIR----- 68
          E  E+EL NAK  IE L    +    R +AE  +YK+R      DLL++RKE+I+     
Sbjct: 32 EGAEKELDNAKKEIESL----KDSWLRERAEFQNYKRRTAN---DLLNARKESIKKFAEG 84

Query: 69 LTEQIANIEK 78
          LT  + N+E+
Sbjct: 85 LTGALDNLER 94


>sp|B0SHT2|GRPE_LEPBA Protein GrpE OS=Leptospira biflexa serovar Patoc (strain Patoc 1
          / Ames) GN=grpE PE=3 SV=1
          Length = 190

 Score = 30.4 bits (67), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 12/70 (17%)

Query: 14 ESLEQELSNAKLLIERLERTQRQEAARSQAELGSYKQRLDRADADLLHSRKENIR----- 68
          E  E+EL NAK  IE L    +    R +AE  +YK+R      DLL++RKE+I+     
Sbjct: 32 EGAEKELDNAKKEIESL----KDSWLRERAEFQNYKRRTAN---DLLNARKESIKKFAEG 84

Query: 69 LTEQIANIEK 78
          LT  + N+E+
Sbjct: 85 LTGALDNLER 94


>sp|E9PTG8|STK10_RAT Serine/threonine-protein kinase 10 OS=Rattus norvegicus GN=Stk10
           PE=2 SV=1
          Length = 967

 Score = 29.3 bits (64), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 15/83 (18%)

Query: 13  RESLEQELSNAKLLIERLERTQRQEAAR-SQAELGSYKQRLDRADADLLHSRKENIRLTE 71
           +E L+Q     K  IE+  R QRQE+ R  Q      KQRLDR   D +  +KE++    
Sbjct: 654 QEQLKQMKKEVKRSIEKALRKQRQESMRMGQDSHTQKKQRLDR---DFVAKQKEDL---- 706

Query: 72  QIANIEKELQMAKLSADDREDLL 94
                  EL M KL+A++R ++ 
Sbjct: 707 -------ELAMKKLTAENRREIC 722


>sp|B8JK76|SDCG8_DANRE Serologically defined colon cancer antigen 8 homolog OS=Danio rerio
           GN=Sdccag8 PE=2 SV=2
          Length = 701

 Score = 28.9 bits (63), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 9/88 (10%)

Query: 36  QEAARSQAELGSYKQRLDRADADLLHSRKENIRLTEQIANIEKELQMAKL--SADDR--- 90
           QE  +   EL  Y+QRL+ A      +R E   L E ++  +++L + +    A +R   
Sbjct: 476 QEVQKLGVELSGYRQRLEEAQRAEGRARAEAAGLAEGLSRAQRQLHLTRQEKEASERCCG 535

Query: 91  EDL----LQDPKKDKELTSLIMDMDAKH 114
           ED+     Q  ++++ELT  +  M+A+H
Sbjct: 536 EDMAALTFQAQRRERELTQTLQQMEAQH 563


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.308    0.125    0.312 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,503,457
Number of Sequences: 539616
Number of extensions: 1246169
Number of successful extensions: 9086
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 723
Number of HSP's that attempted gapping in prelim test: 7971
Number of HSP's gapped (non-prelim): 1851
length of query: 117
length of database: 191,569,459
effective HSP length: 84
effective length of query: 33
effective length of database: 146,241,715
effective search space: 4825976595
effective search space used: 4825976595
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)