BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14456
(93 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8CGF6|WDR47_MOUSE WD repeat-containing protein 47 OS=Mus musculus GN=Wdr47 PE=1 SV=2
Length = 920
Score = 122 bits (306), Expect = 7e-28, Method: Composition-based stats.
Identities = 50/87 (57%), Positives = 62/87 (71%)
Query: 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWG 60
MHDGT+RD+ F+E + ++LIS GAGDC IY TDC GQ ALSGH+GH+L+LY W
Sbjct: 707 MHDGTIRDLAFMEGPESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILALYTWS 766
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
G + SGS D+TVRFWDLR C V+
Sbjct: 767 GWMIASGSQDKTVRFWDLRVPSCVRVV 793
>sp|O94967|WDR47_HUMAN WD repeat-containing protein 47 OS=Homo sapiens GN=WDR47 PE=1 SV=1
Length = 919
Score = 122 bits (305), Expect = 9e-28, Method: Composition-based stats.
Identities = 50/87 (57%), Positives = 62/87 (71%)
Query: 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWG 60
MHDGT+RD+ F+E + ++LIS GAGDC IY TDC GQ ALSGH+GH+L+LY W
Sbjct: 706 MHDGTIRDLAFMEGPESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILALYTWS 765
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
G + SGS D+TVRFWDLR C V+
Sbjct: 766 GWMIASGSQDKTVRFWDLRVPSCVRVV 792
>sp|Q8MY12|MHCKC_DICDI Myosin heavy chain kinase C OS=Dictyostelium discoideum GN=mhkC
PE=1 SV=1
Length = 780
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGG 61
H ++ VC + + L+ G+ D +IYV + ATG GH G V +LY
Sbjct: 632 HTRAIKSVCAMGN-------LLFSGSNDQQIYVWNLATGTILTNFQGHEGWVKTLYAHNN 684
Query: 62 ATVLSGSHDRTVRFWDLRTRGCTNVL 87
+ SGSHD T+R WDL+T C N +
Sbjct: 685 -MLYSGSHDETIRIWDLKTTRCVNTI 709
>sp|C4YFX2|TUP1_CANAW Transcriptional repressor TUP1 OS=Candida albicans (strain WO-1)
GN=TUP1 PE=4 SV=1
Length = 511
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGG 61
D +R VCF D L++ GA D I + D +T + + L GH + SL + G
Sbjct: 254 DLYIRSVCFSPDGK-----LLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDG 308
Query: 62 ATVLSGSHDRTVRFWDLRTRGCTNVLT 88
++SGS DR+VR WDLRT C+ L+
Sbjct: 309 DRLVSGSGDRSVRIWDLRTSQCSLTLS 335
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 26/55 (47%)
Query: 26 GAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRT 80
G+GD + + D T Q LS G + G + +GS DRTVR WD T
Sbjct: 314 GSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTT 368
Score = 33.9 bits (76), Expect = 0.29, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQAL-------SGHSGHVLSL-YNWGGATVLSGSHDRTV 73
LI+ G+ D + V D TG + L +GH V S+ ++ G + SGS DRTV
Sbjct: 351 LIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTV 410
Query: 74 RFWDLRTR 81
+ W L +
Sbjct: 411 KLWHLEGK 418
>sp|P0CY34|TUP1_CANAL Transcriptional repressor TUP1 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=TUP1 PE=1 SV=1
Length = 512
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGG 61
D +R VCF D L++ GA D I + D +T + + L GH + SL + G
Sbjct: 255 DLYIRSVCFSPDGK-----LLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDG 309
Query: 62 ATVLSGSHDRTVRFWDLRTRGCTNVLT 88
++SGS DR+VR WDLRT C+ L+
Sbjct: 310 DRLVSGSGDRSVRIWDLRTSQCSLTLS 336
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 26/55 (47%)
Query: 26 GAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRT 80
G+GD + + D T Q LS G + G + +GS DRTVR WD T
Sbjct: 315 GSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTT 369
Score = 33.9 bits (76), Expect = 0.29, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQAL-------SGHSGHVLSL-YNWGGATVLSGSHDRTV 73
LI+ G+ D + V D TG + L +GH V S+ ++ G + SGS DRTV
Sbjct: 352 LIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTV 411
Query: 74 RFWDLRTR 81
+ W L +
Sbjct: 412 KLWHLEGK 419
>sp|Q3Y8L7|WDR69_CHLRE Outer row dynein assembly protein 16 OS=Chlamydomonas reinhardtii
GN=ODA16 PE=1 SV=1
Length = 446
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
N S +I+ G+ D + D TGQ L+GH ++SL +N GG +++GS D R
Sbjct: 188 NPQSTIIATGSMDNTAKLWDVETGQERATLAGHRAEIVSLGFNTGGDLIVTGSFDHDSRL 247
Query: 76 WDLRTRGCTNVLT 88
WD+RT C +VL+
Sbjct: 248 WDVRTGQCVHVLS 260
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80
LI G+ D + D TGQ LSGH G V S +N+ G V+SGS D T R WD+R+
Sbjct: 235 LIVTGSFDHDSRLWDVRTGQCVHVLSGHRGEVSSTQFNYAGTLVVSGSIDCTSRLWDVRS 294
Query: 81 RGCTNV 86
C +V
Sbjct: 295 GRCLSV 300
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLS-LYNWG 60
H+G + V F + L+ + C+++ DC TG+ Q L GH+ + S +N+
Sbjct: 346 HEGEISKVAF---NPQGTRLITASSDKTCRLW--DCDTGECLQVLEGHTDEIFSCAFNYE 400
Query: 61 GATVLSGSHDRTVRFW 76
G +++GS D T R W
Sbjct: 401 GDFIITGSKDNTCRIW 416
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 30 CKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80
CK++ D TGQ + L GH ++ L +N + +GS D T + WD+ T
Sbjct: 161 CKLW--DAYTGQLYYTLKGHQTEIVCLSFNPQSTIIATGSMDNTAKLWDVET 210
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H V DV F + + ++ + G ++Y T TG L GH G + + +N
Sbjct: 304 HTDEVLDVAF---DAAGTKMVSASADGSARLYHT--LTGVCQHTLVGHEGEISKVAFNPQ 358
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
G +++ S D+T R WD T C VL
Sbjct: 359 GTRLITASSDKTCRLWDCDTGECLQVL 385
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 17 NKSSLLISGGAGD--CKIYVTDCATGQAFQALSGHSG--HVLSLYNWGGATVLSGSHDRT 72
NKS G+ D CK++ T TG+ L GH + ++ N G +++GS D+T
Sbjct: 103 NKSGDRFITGSYDRTCKVWNT--FTGEEVFTLEGHKNVVYAIAFNNPYGDKIVTGSFDKT 160
Query: 73 VRFWDLRT 80
+ WD T
Sbjct: 161 CKLWDAYT 168
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G V F N + L+ G+ DC + D +G+ GH+ VL + ++
Sbjct: 262 HRGEVSSTQF-----NYAGTLVVSGSIDCTSRLWDVRSGRCLSVKQGHTDEVLDVAFDAA 316
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
G ++S S D + R + T C + L
Sbjct: 317 GTKMVSASADGSARLYHTLTGVCQHTL 343
>sp|P16649|TUP1_YEAST General transcriptional corepressor TUP1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TUP1 PE=1
SV=2
Length = 713
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGG 61
D +R VCF D ++ GA D I + D + L GH + SL Y G
Sbjct: 443 DLYIRSVCFSPDGK-----FLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSG 497
Query: 62 ATVLSGSHDRTVRFWDLRTRGCTNVLT 88
++SGS DRTVR WDLRT C+ L+
Sbjct: 498 DKLVSGSGDRTVRIWDLRTGQCSLTLS 524
Score = 34.7 bits (78), Expect = 0.20, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQAL-------SGHSGHVLSL-YNWGGATVLSGSHDRTVR 74
I+ G+ D + V D TG + L +GH V S+ + G +V+SGS DR+V+
Sbjct: 542 IAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVK 601
Query: 75 FWDLR 79
W+L+
Sbjct: 602 LWNLQ 606
Score = 33.5 bits (75), Expect = 0.35, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 26 GAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWG-GATVLSGSHDRTVRFWDLRT 80
G+GD + + D TGQ LS G + G G + +GS DR VR WD T
Sbjct: 503 GSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSET 558
>sp|P56094|TUP1_KLULA General transcriptional corepressor TUP1 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=TUP1 PE=1 SV=2
Length = 682
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGG 61
D +R VCF D ++ GA D I + D T + L GH + SL Y G
Sbjct: 406 DLYIRSVCFSPDGK-----FLATGAEDKLIRIWDLETKKIVMTLKGHEQDIYSLDYFPSG 460
Query: 62 ATVLSGSHDRTVRFWDLRTRGCTNVLT 88
++SGS DRTVR WDL T C+ L+
Sbjct: 461 NKLVSGSGDRTVRIWDLTTGTCSLTLS 487
Score = 32.3 bits (72), Expect = 0.82, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 26 GAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWG-GATVLSGSHDRTVRFWDLRT 80
G+GD + + D TG LS G + G G + +GS DRTVR WD T
Sbjct: 466 GSGDRTVRIWDLTTGTCSLTLSIEDGVTTVAVSPGEGKFIAAGSLDRTVRVWDSDT 521
Score = 29.6 bits (65), Expect = 5.4, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 11/86 (12%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAG-DCKIYVTDCATGQAFQA-----LSGHSGHVLS 55
H +V V F D ++SG K++ + +GQ A +GH VLS
Sbjct: 538 HRDSVYSVVFTRDGKG----VVSGSLDRSVKLWNLNGLSGQKSHAECEVTYTGHKDFVLS 593
Query: 56 L-YNWGGATVLSGSHDRTVRFWDLRT 80
+ +LSGS DR V FWD ++
Sbjct: 594 VATTQNDEYILSGSKDRGVLFWDTKS 619
>sp|Q9V3J8|WDS_DROME Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1
Length = 361
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H + DV + D S LL+SG + D + V + +TG++ + L GHS +V +N
Sbjct: 113 HKLGISDVAWSSD----SRLLVSG-SDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQ 167
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
++SGS D +VR WD+RT C L
Sbjct: 168 SNLIVSGSFDESVRIWDVRTGKCLKTL 194
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
N S LI G+ D + + D TG+ + L HS V ++ +N G+ ++S S+D R
Sbjct: 165 NPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 224
Query: 76 WDLRTRGCTNVL 87
WD + C L
Sbjct: 225 WDTASGQCLKTL 236
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 9 VCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLY-NW---GGATV 64
V F++ + N +L + K++ D + G+ + +GH ++ N+ GG +
Sbjct: 244 VSFVKFSPNGKYILAATLDNTLKLW--DYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWI 301
Query: 65 LSGSHDRTVRFWDLRTRGCTNVL 87
+SGS D V W+L+++ L
Sbjct: 302 VSGSEDNMVYIWNLQSKEVVQKL 324
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGA-GDCKIYVTDCATGQAFQALSGHSGHVLSL--YN 58
H V V F D SL++S G C+I+ D A+GQ + L +S ++
Sbjct: 197 HSDPVSAVHFNRD----GSLIVSSSYDGLCRIW--DTASGQCLKTLIDDDNPPVSFVKFS 250
Query: 59 WGGATVLSGSHDRTVRFWDLRTRGCTNVLT 88
G +L+ + D T++ WD C T
Sbjct: 251 PNGKYILAATLDNTLKLWDYSKGKCLKTYT 280
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H +V V F D ++ G+GD I + D A+G Q L GH G V S+ ++
Sbjct: 966 HGSSVLSVAFSPDGQR-----VASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPD 1020
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
G V SGS D+T++ WD + CT L
Sbjct: 1021 GQRVASGSDDKTIKIWDTASGTCTQTL 1047
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G V+ V F D ++ G+ D I + D A+G Q L GH VLS+ ++
Sbjct: 924 HGGRVQSVAFSPDGQR-----VASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPD 978
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
G V SGS D+T++ WD + CT L
Sbjct: 979 GQRVASGSGDKTIKIWDTASGTCTQTL 1005
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G+V V F D ++ G+ D I + D A+G Q L GH G V S+ ++
Sbjct: 882 HGGSVWSVAFSPDRER-----VASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPD 936
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
G V SGS D T++ WD + CT L
Sbjct: 937 GQRVASGSDDHTIKIWDAASGTCTQTL 963
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G V+ V F D ++ G+ D I + D A+G Q L GH G V S+ ++
Sbjct: 1176 HGGWVQSVAFSPDGQR-----VASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPD 1230
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
G V SGS D T++ WD + CT L
Sbjct: 1231 GQRVASGSSDNTIKIWDTASGTCTQTL 1257
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G V V F D ++ G+ D I + D A+G Q L GH G V S+ ++
Sbjct: 1134 HGGWVHSVAFSPDGQR-----VASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPD 1188
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
G V SGS D+T++ WD + CT L
Sbjct: 1189 GQRVASGSSDKTIKIWDTASGTCTQTL 1215
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G+V V F D ++ G+ D I + D A+G Q L GH G V S+ ++
Sbjct: 1008 HGGSVWSVAFSPDGQR-----VASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPD 1062
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
G V SGS D T++ WD + CT L
Sbjct: 1063 GQRVASGSDDHTIKIWDAVSGTCTQTL 1089
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H +V V F D ++ G+ D I + D A+G Q L GH G V S+ ++
Sbjct: 840 HGSSVLSVAFSADGQR-----VASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPD 894
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
V SGS D+T++ WD + CT L
Sbjct: 895 RERVASGSDDKTIKIWDAASGTCTQTL 921
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G V+ V F D ++ G+ D I + D +G Q L GH V S+ ++
Sbjct: 1050 HGGWVQSVVFSPDGQR-----VASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPD 1104
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
G V SGS D T++ WD + CT L
Sbjct: 1105 GQRVASGSIDGTIKIWDAASGTCTQTL 1131
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H +V V F D ++ G+ D I + D A+G Q L GH G V S+ ++
Sbjct: 1092 HGDSVWSVAFSPDGQR-----VASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPD 1146
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
G V SGS D T++ WD + CT L
Sbjct: 1147 GQRVASGSIDGTIKIWDAASGTCTQTL 1173
>sp|P53699|CDC4_CANAX Cell division control protein 4 OS=Candida albicans GN=CDC4 PE=3
SV=1
Length = 684
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 26 GAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRGCTN 85
G D I + TGQ + L GH G V +L + G T+++GS DRTVR W+++T CT+
Sbjct: 341 GVDDKCISIYSTQTGQLMKVLEGHEGGVWAL-KYTGNTLVTGSTDRTVRVWNMKTGQCTH 399
Query: 86 VL 87
+
Sbjct: 400 IF 401
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 45 ALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG-CTNVL 87
LSGH+ V S+ +G ++SGS+D TVR WDL G CT+VL
Sbjct: 475 VLSGHTQSVRSISGYGNI-IISGSYDSTVRVWDLLDDGHCTHVL 517
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 25 GGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLR 79
A D + + D TG+ L GH G ++ + G V+SGS ++ ++ W++
Sbjct: 578 SAAADATLRIWDAKTGELRSKLKGH-GAAITCFEHDGLRVVSGS-EKMLKLWNVE 630
>sp|A8NEG8|LIS1_COPC7 Nuclear distribution protein PAC1 OS=Coprinopsis cinerea (strain
Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=PAC1
PE=3 SV=3
Length = 434
Score = 49.3 bits (116), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 14 DTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRT 72
D + + L ++ GA D + + D TGQ + L+GH V +L ++ G +LS S D+T
Sbjct: 303 DRTKRHGLFLASGARDKTVKLWDTQTGQMIRNLAGHDNWVRALAFHPSGKYLLSSSDDKT 362
Query: 73 VRFWDLRTRGCTNVL 87
VR W+L T C ++
Sbjct: 363 VRVWELSTGRCLRIV 377
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGG 61
HD V V F+ LI + D I V D A+ + LSGHS V +
Sbjct: 192 HDHAVSAVRFMPGDQ-----LIVSASRDRTIRVFDVASTHQVRTLSGHSEWVRCVIPSAD 246
Query: 62 ATVL-SGSHDRTVRFWD 77
T+L SGS D+TVR WD
Sbjct: 247 GTMLASGSKDQTVRLWD 263
>sp|Q5BK30|WDR69_RAT Outer row dynein assembly protein 16 homolog OS=Rattus norvegicus
GN=Wdr69 PE=2 SV=1
Length = 415
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
HD + D CF D + K LI+ + D V + T + L GH G + + +N
Sbjct: 302 HDDEILDSCF--DYTGK---LIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQ 356
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
G +L+GS D+T R WD++T C VL
Sbjct: 357 GNRLLTGSSDKTARIWDVQTGQCLQVL 383
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLS-LYNWG 60
H+G + + F N + G+ D + D TGQ Q L GH+ + S +N+
Sbjct: 344 HEGEISKISF-----NPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYK 398
Query: 61 GATVLSGSHDRTVRFW 76
G V++GS D + R W
Sbjct: 399 GNIVITGSKDNSCRIW 414
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLS-LYNWGGATVLSGSHDRTVRFWDLRTR 81
I G+ D + V D +TG+ L GH + S L++W + +L+GS D+T WD +
Sbjct: 234 IITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSG 293
Query: 82 GCTNVLT 88
C LT
Sbjct: 294 KCVATLT 300
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
N S +++ G+ D + D +G+ L+GH ++SL ++ G +++GS D TV
Sbjct: 186 NPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVV 245
Query: 76 WDLRT 80
WD T
Sbjct: 246 WDAST 250
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 7 RDVCFIEDTSNKSSLLISGGAGD--CKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGAT 63
R+V + +N I+ G+ D CK++ + TG+ + GH+ ++ L +N
Sbjct: 134 RNVVYAIAFNNPYGDKIATGSFDKTCKLWSAE--TGKCYHTFRGHTAEIVCLSFNPQSTV 191
Query: 64 VLSGSHDRTVRFWDLRT 80
V +GS D T + WD+++
Sbjct: 192 VATGSMDTTAKLWDIQS 208
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 30 CKIYVTDCATGQAFQALSGHSG--HVLSLYNWGGATVLSGSHDRTVRFWDLRTRGC 83
CK++ D A+G+ L GH + ++ N G + +GS D+T + W T C
Sbjct: 116 CKVW--DTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKC 169
>sp|Q5RAC9|A16L1_PONAB Autophagy-related protein 16-1 OS=Pongo abelii GN=ATG16L1 PE=2 SV=1
Length = 607
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGA 62
G+ + IE S S LL + +I+ D + L+GHSG VLS + A
Sbjct: 364 GSNAGITSIEFDSAGSYLLAASNDFASRIWTVD--DSRLRHTLTGHSGKVLSAKFLLDNA 421
Query: 63 TVLSGSHDRTVRFWDLRTRGC 83
++SGSHDRT++ WDLR++ C
Sbjct: 422 RIVSGSHDRTLKHWDLRSKVC 442
>sp|B4LQ21|LIS1_DROVI Lissencephaly-1 homolog OS=Drosophila virilis GN=Lis-1 PE=3 SV=1
Length = 411
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80
++ G+ D I + D + GQ L+GH V L ++ GG ++S S D+T+R WDLR
Sbjct: 311 FLASGSRDKTIRIWDVSVGQCLLTLNGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRN 370
Query: 81 RGCTNVL 87
+ C L
Sbjct: 371 KRCMKTL 377
Score = 35.8 bits (81), Expect = 0.088, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG-QAFQALSGHSGHVLSL-YNW 59
H +V+DV F D K L++ + D I + D + + + GH +V S+ +
Sbjct: 149 HTDSVQDVAF--DAQGK---LLASCSADLSIKLWDFQQSYECVKTMHGHDHNVSSVAFVP 203
Query: 60 GGATVLSGSHDRTVRFWDLRTRGCTNVLT 88
G VLS S DRT++ W++ T C T
Sbjct: 204 AGDYVLSASRDRTIKMWEVATGYCVKTYT 232
Score = 29.6 bits (65), Expect = 5.4, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79
L+ + D I + D TG+ ++L GH+ V + ++ G + S S D +++ WD +
Sbjct: 122 LMVSASEDATIKIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQ 180
>sp|Q4R8E7|WDR69_MACFA Outer row dynein assembly protein 16 homolog OS=Macaca fascicularis
GN=WDR69 PE=2 SV=1
Length = 415
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
HD + D CF D + K LI+ + D + AT + L GH G + + +N
Sbjct: 302 HDDEILDSCF--DYTGK---LIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQ 356
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
G +L+GS D+T R WD +T C VL
Sbjct: 357 GNRLLTGSSDKTARIWDAQTGQCLQVL 383
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
N S L++ G+ D + + G+ L GHS ++SL +N G +++GS D TV
Sbjct: 186 NPQSTLVATGSMDTTAKLWNIQNGEEVCTLRGHSAEIISLSFNTSGDRIITGSFDHTVVV 245
Query: 76 WDLRTRGCTNVL 87
WD T G N+L
Sbjct: 246 WDADTGGKVNIL 257
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLS-LYNWG 60
H+G + + F N + G+ D + D TGQ Q L GH+ + S +N+
Sbjct: 344 HEGEISKISF-----NPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCTFNYK 398
Query: 61 GATVLSGSHDRTVRFW 76
G V++GS D T R W
Sbjct: 399 GNIVITGSKDNTCRIW 414
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLS-LYNWGGATVLSGSHDRTVRF 75
N S I G+ D + V D TG L GH + S L+NW + +L+GS D+T
Sbjct: 228 NTSGDRIITGSFDHTVVVWDADTGGKVNILIGHCAEISSALFNWDCSLILTGSMDKTCML 287
Query: 76 WDLRTRGCTNVLT 88
WD C LT
Sbjct: 288 WDATNGKCVATLT 300
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 17 NKSSLLISGGAGD--CKIYVTDCATGQAFQALSGHSG--HVLSLYNWGGATVLSGSHDRT 72
NKS G+ D CK++ D A+G+ L GH + ++ N G +GS D+T
Sbjct: 101 NKSGSCFITGSYDRTCKLW--DTASGEELNTLEGHRNVVYAIAFNNPYGDKTATGSFDKT 158
Query: 73 VRFWDLRTRGC 83
+ W + T C
Sbjct: 159 CKLWSVETGKC 169
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 30 CKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79
CK++ + TG+ + GH+ ++ L +N V +GS D T + W+++
Sbjct: 159 CKLWSVE--TGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWNIQ 207
>sp|P07834|CDC4_YEAST Cell division control protein 4 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CDC4 PE=1 SV=2
Length = 779
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 34/62 (54%)
Query: 26 GAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRGCTN 85
GA D I V D + LSGH G V +L G ++SGS DRTVR WD++ CT+
Sbjct: 398 GADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTH 457
Query: 86 VL 87
V
Sbjct: 458 VF 459
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLS-LYNWGGATVLSGSHDRTVRFWDLR 79
++ G+ D + V D A + LSGH+ + S +Y+ +S S D T+R WDL
Sbjct: 542 IVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLE 600
>sp|Q0P593|WDR69_BOVIN Outer row dynein assembly protein 16 homolog OS=Bos taurus GN=WDR69
PE=2 SV=1
Length = 415
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
HD + D CF D + K LI+ + D + AT + L GH G + + +N
Sbjct: 302 HDDEILDSCF--DYTGK---LIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQ 356
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
G +L+GS D+T R WD +T C VL
Sbjct: 357 GNRLLTGSSDKTARIWDAQTGQCLQVL 383
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLS-LYNWG 60
H+G + + F N + G+ D + D TGQ Q L GH+ + S +N+
Sbjct: 344 HEGEISKISF-----NPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYK 398
Query: 61 GATVLSGSHDRTVRFW 76
G +++GS D T R W
Sbjct: 399 GDIIITGSKDNTCRIW 414
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
N S L++ G+ D + D +G+ L+GHS ++SL +N G +++GS D TV
Sbjct: 186 NPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTV 245
Query: 76 WDLRT 80
W+ T
Sbjct: 246 WEADT 250
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLS-LYNWGGATVLSGSHDRTVRF 75
N S I G+ D + V + TG+ L GH + S ++NW + +L+GS D+T +
Sbjct: 228 NTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKL 287
Query: 76 WDLRTRGCTNVLT 88
WD C LT
Sbjct: 288 WDAVNGKCVATLT 300
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Query: 17 NKSSLLISGGAGD--CKIYVTDCATGQAFQALSGHSG--HVLSLYNWGGATVLSGSHDRT 72
NKS G+ D CK++ D A+G+ L GH + ++ N G + +GS D+T
Sbjct: 101 NKSGSCFITGSYDRTCKLW--DTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKT 158
Query: 73 VRFWDLRTRGC 83
+ W + T C
Sbjct: 159 CKLWSVETGKC 169
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 7 RDVCFIEDTSNKSSLLISGGAGD--CKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGAT 63
R+V + +N I+ G+ D CK++ + TG+ + GH+ ++ L +N
Sbjct: 134 RNVVYAIAFNNPYGDKIATGSFDKTCKLWSVE--TGKCYHTFRGHTAEIVCLSFNPQSTL 191
Query: 64 VLSGSHDRTVRFWDLRT 80
V +GS D T + WD+++
Sbjct: 192 VATGSMDTTAKLWDIQS 208
>sp|Q676U5|A16L1_HUMAN Autophagy-related protein 16-1 OS=Homo sapiens GN=ATG16L1 PE=1 SV=2
Length = 607
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGA 62
G+ + IE S S LL + +I+ D + L+GHSG VLS + A
Sbjct: 364 GSNAGITSIEFDSAGSYLLAASNDFASRIWTVD--DYRLRHTLTGHSGKVLSAKFLLDNA 421
Query: 63 TVLSGSHDRTVRFWDLRTRGC 83
++SGSHDRT++ WDLR++ C
Sbjct: 422 RIVSGSHDRTLKLWDLRSKVC 442
>sp|Q5I0B9|ATG16_XENTR Autophagy-related protein 16 OS=Xenopus tropicalis GN=atg16 PE=2
SV=2
Length = 622
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGA 62
G+ + IE S S LL + +I+ D + L+GHSG VLS + A
Sbjct: 379 GSNAGITSIEFDSAGSYLLAASNDFASRIWTVD--DYRLRHTLTGHSGKVLSAKFLLDNA 436
Query: 63 TVLSGSHDRTVRFWDLRTRGC 83
++SGSHDRT++ WDLR++ C
Sbjct: 437 RIVSGSHDRTLKLWDLRSKVC 457
>sp|B4JWA1|LIS1_DROGR Lissencephaly-1 homolog OS=Drosophila grimshawi GN=Lis-1 PE=3 SV=1
Length = 411
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80
++ G+ D I + D + GQ L+GH V L ++ GG ++S S D+T+R WDLR
Sbjct: 311 FLASGSRDKTIRIWDVSVGQCLLTLNGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRN 370
Query: 81 RGCTNVL 87
+ C L
Sbjct: 371 KRCMKTL 377
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG-QAFQALSGHSGHVLSL-YNW 59
H +V+DV F D K LL+S A D I + D + + + GH +V S+ +
Sbjct: 149 HTDSVQDVAF--DAQGK--LLVSCSA-DLSIKLWDFQQSYECVKTMHGHDHNVSSVAFVP 203
Query: 60 GGATVLSGSHDRTVRFWDLRTRGCTNVLT 88
G VLS S DRT++ W++ T C T
Sbjct: 204 AGDYVLSASRDRTIKMWEVATGYCVKTYT 232
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79
L+ + D I + D TG+ + L GH+ V + ++ G ++S S D +++ WD +
Sbjct: 122 LMVSASEDATIKIWDFETGEYERTLKGHTDSVQDVAFDAQGKLLVSCSADLSIKLWDFQ 180
>sp|Q8N136|WDR69_HUMAN Outer row dynein assembly protein 16 homolog OS=Homo sapiens
GN=WDR69 PE=1 SV=1
Length = 415
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
HD + D CF D + K LI+ + D + AT + L GH G + + +N
Sbjct: 302 HDDEILDSCF--DYTGK---LIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQ 356
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
G +L+GS D+T R WD +T C VL
Sbjct: 357 GNHLLTGSSDKTARIWDAQTGQCLQVL 383
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
N S L++ G+ D + D G+ L GHS ++SL +N G +++GS D TV
Sbjct: 186 NPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVV 245
Query: 76 WDLRTRGCTNVL 87
WD T N+L
Sbjct: 246 WDADTGRKVNIL 257
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLS-LYNWG 60
H+G + + F N + G+ D + D TGQ Q L GH+ + S +N+
Sbjct: 344 HEGEISKISF-----NPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYK 398
Query: 61 GATVLSGSHDRTVRFW 76
G V++GS D T R W
Sbjct: 399 GNIVITGSKDNTCRIW 414
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
N S I G+ D + V D TG+ L GH + S +NW + +L+GS D+T +
Sbjct: 228 NTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKL 287
Query: 76 WDLRTRGCTNVLT 88
WD C LT
Sbjct: 288 WDATNGKCVATLT 300
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Query: 17 NKSSLLISGGAGD--CKIYVTDCATGQAFQALSGHSG--HVLSLYNWGGATVLSGSHDRT 72
NKS G+ D CK++ D A+G+ L GH + ++ N G + +GS D+T
Sbjct: 101 NKSGSCFITGSYDRTCKLW--DTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKT 158
Query: 73 VRFWDLRTRGC 83
+ W + T C
Sbjct: 159 CKLWSVETGKC 169
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 7 RDVCFIEDTSNKSSLLISGGAGD--CKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGAT 63
R+V + +N I+ G+ D CK++ + TG+ + GH+ ++ L +N
Sbjct: 134 RNVVYAIAFNNPYGDKIATGSFDKTCKLWSVE--TGKCYHTFRGHTAEIVCLSFNPQSTL 191
Query: 64 VLSGSHDRTVRFWDLR 79
V +GS D T + WD++
Sbjct: 192 VATGSMDTTAKLWDIQ 207
>sp|P87060|POP1_SCHPO WD repeat-containing protein pop1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pop1 PE=1 SV=1
Length = 775
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 31 KIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRGCTNVL 87
+I + D TG ++L H G V + + + G T+++GS DRTVR WDLRT C V
Sbjct: 427 RINIYDTKTGVLIRSLEEHEGDVWT-FEYVGDTLVTGSTDRTVRVWDLRTGECKQVF 482
Score = 38.1 bits (87), Expect = 0.016, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTR 81
IS G D KI + + +G+ Q L GHS V + +N S D ++R WDL T
Sbjct: 633 ISAGT-DAKIRIWNLESGELLQTLHGHSNLVSQVTFNQNILVSASAPPDTSLRVWDLNTG 691
Query: 82 GCTNVL 87
C ++L
Sbjct: 692 SCRDIL 697
Score = 32.3 bits (72), Expect = 0.81, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 15/98 (15%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H +VR+V + D LI + D + V +TG L GH G V S+ N
Sbjct: 576 HTDSVREVACLGD-------LIVSASYDGTLRVWKASTGVCLHVLRGHVGRVYSVTINPS 628
Query: 61 GATVLSGSHDRTVRFWDLRT-------RGCTNVLTPIT 91
+S D +R W+L + G +N+++ +T
Sbjct: 629 RQQCISAGTDAKIRIWNLESGELLQTLHGHSNLVSQVT 666
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGG 61
H V V F N++ L+ + D + V D TG L GH+ +
Sbjct: 658 HSNLVSQVTF-----NQNILVSASAPPDTSLRVWDLNTGSCRDILKCPLGHI--FFQHDE 710
Query: 62 ATVLSGSHDRTVRFWDLRT 80
+ V+SGSH T++ WD+R+
Sbjct: 711 SKVVSGSHS-TLQLWDIRS 728
>sp|Q54KL5|WDR5_DICDI WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum
GN=wdr5 PE=3 SV=1
Length = 335
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H + D+ + +D S LI + D I + D +G+ + L GH +V + +N
Sbjct: 87 HKEGISDIAWSQD-----SKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQ 141
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLTPITVP 93
++SGS D VR WD+ T CT +++ + P
Sbjct: 142 SNLIVSGSFDENVRIWDVNTGECTKMISAHSDP 174
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
N S LI G+ D + + D TG+ + +S HS V + +N G V+SGS+D TVR
Sbjct: 139 NPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRI 198
Query: 76 WDLRTRGCTNVLT 88
WD T N ++
Sbjct: 199 WDTTTGQLLNTIS 211
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL--YNWGGATVLSGSHDRTVR 74
N+ L+ G+ D + + D TGQ +S G +S ++ G VL+G+ D T+R
Sbjct: 181 NRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLR 240
Query: 75 FW 76
W
Sbjct: 241 LW 242
>sp|Q9SJT9|COPA2_ARATH Coatomer subunit alpha-2 OS=Arabidopsis thaliana GN=At2g21390 PE=2
SV=1
Length = 1218
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H+G VR V F N L +SGG D KI V + T + L GH ++ ++ ++
Sbjct: 50 HEGPVRGVHF----HNSQPLFVSGG-DDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHE 104
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLT 88
++S S D+T+R W+ ++R C +VLT
Sbjct: 105 NPWIVSASDDQTIRIWNWQSRTCISVLT 132
>sp|Q8C0J2|A16L1_MOUSE Autophagy-related protein 16-1 OS=Mus musculus GN=Atg16l1 PE=1 SV=1
Length = 607
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 44 QALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGC 83
L+GHSG VLS + A ++SGSHDRT++ WDLR++ C
Sbjct: 402 HTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVC 442
>sp|Q6FT96|MDV1_CANGA Mitochondrial division protein 1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=MDV1 PE=3 SV=1
Length = 711
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
++ G D I + D TG+ + L GH + SL + T++SGS D T+R WDLR+
Sbjct: 577 LATGTKDGLIRLWDMRTGEVVRVLEGHMDAITSL-KFDATTIISGSLDGTIRLWDLRSNN 635
Query: 83 CTNVLT 88
T++++
Sbjct: 636 LTDIIS 641
Score = 37.7 bits (86), Expect = 0.022, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 41 QAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRGCTNVL 87
+A L H V SLY GA +++ S D+T+R WDL + C V
Sbjct: 490 EALHTLDAHLDEVSSLY-IDGANLMTASQDKTIRRWDLYSGKCIQVF 535
>sp|P78706|RCO1_NEUCR Transcriptional repressor rco-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=rco-1 PE=4 SV=2
Length = 604
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGG 61
D +R VCF D ++ GA D I V D + GH + SL ++ G
Sbjct: 344 DLYIRSVCFSPDGK-----YLATGAEDKLIRVWDIQSRTIRNTFHGHEQDIYSLDFSRDG 398
Query: 62 ATVLSGSHDRTVRFWDLRTRGCTNVLT 88
T+ SGS DRTVR WD+ T T+VL+
Sbjct: 399 RTIASGSGDRTVRLWDIETGQNTSVLS 425
Score = 35.8 bits (81), Expect = 0.071, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLR 79
I+ G+GD + + D TGQ LS G + V +GS D++VR WD+R
Sbjct: 401 IASGSGDRTVRLWDIETGQNTSVLSIEDGVTTVAISPDKQFVAAGSLDKSVRVWDMR 457
Score = 34.7 bits (78), Expect = 0.15, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 9/46 (19%)
Query: 40 GQAFQALSGHSGHVLSL-----YNWGGATVLSGSHDRTVRFWDLRT 80
G+ + GH VLS+ W VLSGS DR V+FWD RT
Sbjct: 515 GRCIKTFEGHRDFVLSVALTPDSQW----VLSGSKDRGVQFWDPRT 556
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWG----GATVLSGSHDRTVRFWD 77
++ G+ D + V D G + L G GH S+Y+ G ++SGS D+T++ W+
Sbjct: 441 FVAAGSLDKSVRVWD-MRGYLAERLEGPDGHKDSVYSVAFSPDGRNLVSGSLDKTIKMWE 499
Query: 78 LRT-RGCTNVLTP 89
L RG + P
Sbjct: 500 LSAPRGIPSSAPP 512
>sp|Q0J3D9|COPA3_ORYSJ Coatomer subunit alpha-3 OS=Oryza sativa subsp. japonica
GN=Os09g0127800 PE=2 SV=1
Length = 1218
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 14/92 (15%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL----- 56
HDG VR V F L +SGG D KI V + T + L GH ++ ++
Sbjct: 50 HDGPVRGVHF----HATQPLFVSGG-DDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHHE 104
Query: 57 YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLT 88
Y W ++S S D+T+R W+ ++R C VLT
Sbjct: 105 YPW----IVSASDDQTIRIWNWQSRTCVAVLT 132
>sp|Q9AUR8|COPA1_ORYSJ Coatomer subunit alpha-1 OS=Oryza sativa subsp. japonica
GN=Os03g0711400 PE=2 SV=1
Length = 1218
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 14/92 (15%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL----- 56
HDG VR V F L +SGG D KI V + T + L GH ++ ++
Sbjct: 50 HDGPVRGVHF----HATQPLFVSGG-DDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHHE 104
Query: 57 YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLT 88
Y W ++S S D+T+R W+ ++R C VLT
Sbjct: 105 YPW----IVSASDDQTIRIWNWQSRTCVAVLT 132
>sp|A4RJV3|MDV1_MAGO7 Mitochondrial division protein 1 OS=Magnaporthe oryzae (strain
70-15 / ATCC MYA-4617 / FGSC 8958) GN=MDV1 PE=3 SV=3
Length = 661
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRT 80
++ G D + + D +GQ + L GH+G V +L + +++GSHDR++R WDLRT
Sbjct: 519 LACGTADGMVRLWDLRSGQVHRNLVGHTGPVTAL-QFDNMHLVTGSHDRSIRIWDLRT 575
Score = 36.2 bits (82), Expect = 0.062, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 12/64 (18%)
Query: 24 SGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRGC 83
+G DC ++ LS H V +L+ + G T++SGS D+T+R WDL C
Sbjct: 424 AGSMADCPLFT-----------LSSHMDEVTALH-FKGDTLVSGSSDKTIRQWDLVKGRC 471
Query: 84 TNVL 87
L
Sbjct: 472 VQTL 475
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 26 GAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDL 78
A D + V D G+ +L GH+ V +L + +GS D TVR WDL
Sbjct: 337 AAMDDSVKVWDLNAGRCIGSLEGHTASVRAL-QVEDNILATGSRDATVRLWDL 388
>sp|Q94A40|COPA1_ARATH Coatomer subunit alpha-1 OS=Arabidopsis thaliana GN=At1g62020 PE=1
SV=2
Length = 1216
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 14/92 (15%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL----- 56
H+G VR V F N L +SGG D KI V + + L GH ++ ++
Sbjct: 50 HEGPVRGVHF----HNSQPLFVSGG-DDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHE 104
Query: 57 YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLT 88
Y W ++S S D+T+R W+ ++R C +VLT
Sbjct: 105 YPW----IVSASDDQTIRIWNWQSRTCVSVLT 132
>sp|Q5BLX8|WDR83_RAT WD repeat domain-containing protein 83 OS=Rattus norvegicus
GN=Wdr83 PE=1 SV=1
Length = 315
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVR 74
S +S L SGG GD + + D ATGQ + GH+G V ++ +N +LSGS D +VR
Sbjct: 76 SFDNSHLCSGG-GDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVR 134
Query: 75 FWDLRTRGCTNVLT 88
WD R+R V T
Sbjct: 135 CWDCRSRKPEPVQT 148
>sp|Q9DAJ4|WDR83_MOUSE WD repeat domain-containing protein 83 OS=Mus musculus GN=Wdr83
PE=1 SV=1
Length = 315
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVR 74
S +S L SGG GD + + D ATGQ + GH+G V ++ +N +LSGS D +VR
Sbjct: 76 SFDNSHLCSGG-GDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVR 134
Query: 75 FWDLRTRGCTNVLT 88
WD R+R V T
Sbjct: 135 CWDCRSRKPEPVQT 148
>sp|A6ZQL5|MDV1_YEAS7 Mitochondrial division protein 1 OS=Saccharomyces cerevisiae
(strain YJM789) GN=MDV1 PE=3 SV=1
Length = 714
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
++ G D + + D +G+ + L GH+ + SL + A +++GS+DRTVR WDLRT G
Sbjct: 579 LATGTKDGVVRLWDLRSGKVIRTLKGHTDAITSL-KFDSACLVTGSYDRTVRIWDLRT-G 636
Query: 83 CTNVLTPITVP 93
N + P
Sbjct: 637 LLNKFHAYSAP 647
Score = 33.1 bits (74), Expect = 0.46, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 8/36 (22%)
Query: 64 VLSGSHDRTVRFWDLRTRGC--------TNVLTPIT 91
++SGS DRT+R WDLR+ C NVLT T
Sbjct: 515 LVSGSQDRTIRQWDLRSGKCLQTIDLSFANVLTTST 550
>sp|P47025|MDV1_YEAST Mitochondrial division protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MDV1 PE=1 SV=1
Length = 714
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
++ G D + + D +G+ + L GH+ + SL + A +++GS+DRTVR WDLRT G
Sbjct: 579 LATGTKDGVVRLWDLRSGKVIRTLKGHTDAITSL-KFDSACLVTGSYDRTVRIWDLRT-G 636
Query: 83 CTNVLTPITVP 93
N + P
Sbjct: 637 LLNKFHAYSAP 647
Score = 33.1 bits (74), Expect = 0.46, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 8/36 (22%)
Query: 64 VLSGSHDRTVRFWDLRTRGC--------TNVLTPIT 91
++SGS DRT+R WDLR+ C NVLT T
Sbjct: 515 LVSGSQDRTIRQWDLRSGKCLQTIDLSFANVLTTST 550
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G VR V F D ++ G+GD I + + TG+ + GH+ V S+ Y+
Sbjct: 809 HTGWVRSVAFSADGQT-----LASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPD 863
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
++SGS DRT++ WD +T C L
Sbjct: 864 SKILVSGSGDRTIKLWDCQTHICIKTL 890
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80
+I+ G+ DC + + + +TGQ + LS HS +L + ++ G + S S D++VR WD T
Sbjct: 1034 IIATGSADCTVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQLLASASADQSVRLWDCCT 1093
Query: 81 RGCTNVL 87
C +L
Sbjct: 1094 GRCVGIL 1100
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLS-LYNWGGATVLSGSHDRTVRFWDLRT 80
L++ + D + + DC TG+ L GHS V S +++ G + + S D+TV+ WD +
Sbjct: 1076 LLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQ 1135
Query: 81 RGCTNVLT 88
C LT
Sbjct: 1136 GKCLKTLT 1143
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H +V + + D S +L+SG +GD I + DC T + L GH+ V S+ ++
Sbjct: 851 HTNSVYSIAYSPD----SKILVSG-SGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPD 905
Query: 61 GATVLSGSHDRTVRFWDLRTRGC 83
G T+ S D++VR W+ RT C
Sbjct: 906 GQTLACVSLDQSVRLWNCRTGQC 928
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H V D+ F D +++ + D + + D TG+ GH+ V S+ ++
Sbjct: 1145 HTNWVFDIAFSPDGK-----ILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSPD 1199
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
G V SGS D+TVR W+++T C +L
Sbjct: 1200 GEVVASGSQDQTVRIWNVKTGECLQIL 1226
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H VR V F D +L S GA D + + G + L+GH V S+ ++
Sbjct: 683 HSNWVRFVVFSPD----GEILASCGA-DENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPD 737
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLT 88
G T+ S S D+T++ WD++ C LT
Sbjct: 738 GETLASASGDKTIKLWDIQDGTCLQTLT 765
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80
+++ G+ D + + D TG+ +L GH+ + + ++ T+ S S D +VR W++ T
Sbjct: 950 ILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNIST 1009
Query: 81 RGCTNVL 87
C +L
Sbjct: 1010 GQCFQIL 1016
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTR 81
++ + D + + + +TGQ FQ L H+ V ++ ++ G + +GS D TV+ W++ T
Sbjct: 993 LASASTDSSVRLWNISTGQCFQILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNISTG 1052
Query: 82 GCTNVLT 88
C L+
Sbjct: 1053 QCLKTLS 1059
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H+ V V F D ++ +GD I + D G Q L+GH+ V + ++
Sbjct: 725 HEHEVFSVAFHPDGET-----LASASGDKTIKLWDIQDGTCLQTLTGHTDWVRCVAFSPD 779
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
G T+ S + D T++ WD+ C L
Sbjct: 780 GNTLASSAADHTIKLWDVSQGKCLRTL 806
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 29 DCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80
D + + +C TGQ +A G++ L + ++ + SGS+D+TV+ WD +T
Sbjct: 915 DQSVRLWNCRTGQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWDWQT 967
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H+ TV +V F D N +S + D I + D +GQ L+GHS V+++ ++
Sbjct: 1154 HEQTVNNVYFSPDGKNLAS-----ASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPD 1208
Query: 61 GATVLSGSHDRTVRFW 76
G T+ +GS D+TV+ W
Sbjct: 1209 GQTIAAGSEDKTVKLW 1224
Score = 32.7 bits (73), Expect = 0.59, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
HD V V F D +S + D + + + + G+ + L GH+ V + ++
Sbjct: 1445 HDNEVNKVNFSPDGKTLAS-----ASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPD 1499
Query: 61 GATVLSGSHDRTVRFWD 77
G + S S D+T+R WD
Sbjct: 1500 GKIIASASADKTIRLWD 1516
Score = 32.7 bits (73), Expect = 0.70, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 40 GQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFW 76
G+ F+ L+GH V S+ ++ G T+ SG D+T++ W
Sbjct: 1103 GRLFRTLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLW 1140
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDL 78
LI+ D + + G+A + L GH V + ++ G T+ S S D TV+ W++
Sbjct: 1418 LIASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNV 1475
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFW 76
I+ G+ D + + G+ + L+GH V SL ++ G T+ S S D+T++ W
Sbjct: 1212 IAAGSEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLW 1266
Score = 29.3 bits (64), Expect = 6.9, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H+ V V F D S +++ + D + + G SGHS V S ++
Sbjct: 1529 HNDLVYSVNFNPDGS-----MLASTSADKTVKLWRSHDGHLLHTFSGHSNVVYSSSFSPD 1583
Query: 61 GATVLSGSHDRTVRFWDL 78
G + S S D+TV+ W +
Sbjct: 1584 GRYIASASEDKTVKIWQI 1601
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G V V F D S +++ G+GD + + D ++ Q F GH+ V S+ ++
Sbjct: 989 HTGWVYSVAFNLDGS-----MLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSSD 1043
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
GA + SGS D+TVR WD+ + C L
Sbjct: 1044 GAMLASGSDDQTVRLWDISSGNCLYTL 1070
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTR 81
++ G+GD + + D ++ + L GH+ V S+ +N G+T+ SGS D+TVR W++ +
Sbjct: 1173 LASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSS 1232
Query: 82 GC 83
C
Sbjct: 1233 KC 1234
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H+ V V F +D +++ G+ D + + D ++GQ + GH+ V S+ ++
Sbjct: 905 HNSWVNSVGFSQDGK-----MLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPN 959
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
+ SGS D+TVR WD+ + C +
Sbjct: 960 SLMLASGSSDQTVRLWDISSGECLYIF 986
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTR 81
++ G+ D + + D ++ + L GH+ V ++ ++ GAT+ SGS D+TVR WD+ +
Sbjct: 1131 LANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSS 1190
Query: 82 GCTNVL 87
C +L
Sbjct: 1191 KCLYIL 1196
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H VR V F D ++L SGG D + + D ++G L G++ V L ++
Sbjct: 1073 HTSCVRSVVFSPD----GAMLASGG-DDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPN 1127
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
G T+ +GS D+ VR WD+ ++ C L
Sbjct: 1128 GVTLANGSSDQIVRLWDISSKKCLYTL 1154
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H V V F D S +++ G+ D + + D ++ + GH+ V S+ +N
Sbjct: 1241 HTSWVNSVVFNPDGS-----MLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPD 1295
Query: 61 GATVLSGSHDRTVRFWDLRTRGC 83
G+ + SGS D+TVR W++ + C
Sbjct: 1296 GSMLASGSGDQTVRLWEISSSKC 1318
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H+ V + F D + L++ G+ D + + + ++G+ L GH V S+ ++
Sbjct: 1409 HNNWVGSIVFSPDGT-----LLASGSDDQTVRLWNISSGECLYTLHGHINSVRSVAFSSD 1463
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
G + SGS D T++ WD++T C L
Sbjct: 1464 GLILASGSDDETIKLWDVKTGECIKTL 1490
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80
+++ G+GD + + ++G+ L GH+ V S+ ++ G + SGS D+TVR W++ +
Sbjct: 1382 ILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISS 1441
Query: 81 RGCTNVL 87
C L
Sbjct: 1442 GECLYTL 1448
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H V V F D S ++ G+ D + + + + + GH+ V S+ +N
Sbjct: 1199 HTSWVNSVVFNPDGST-----LASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPD 1253
Query: 61 GATVLSGSHDRTVRFWDLRTRGC 83
G+ + SGS D+TVR WD+ + C
Sbjct: 1254 GSMLASGSSDKTVRLWDISSSKC 1276
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H V V F D S +++ G+GD + + + ++ + GH+ V S+ ++
Sbjct: 1283 HTNWVNSVAFNPDGS-----MLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPD 1337
Query: 61 GATVLSGSHDRTVRFWDLRTRGC 83
G + SGS D+TVR W + + C
Sbjct: 1338 GTMLASGSDDQTVRLWSISSGEC 1360
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGA 62
G+V V F D L +G +G + + ATG+ GH+ V S+ ++ G
Sbjct: 865 GSVLTVAFSPD----GKLFATGDSGGI-VRFWEAATGKELLTCKGHNSWVNSVGFSQDGK 919
Query: 63 TVLSGSHDRTVRFWDLRTRGC 83
+ SGS D+TVR WD+ + C
Sbjct: 920 MLASGSDDQTVRLWDISSGQC 940
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLS-LYNWGGATVLSGSHDRTVRFWDLRT 80
+++ G+ D + + ++G+ GH+ V S +++ GA + SGS D+TVR W + +
Sbjct: 1340 MLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISS 1399
Query: 81 RGCTNVL 87
C L
Sbjct: 1400 GKCLYTL 1406
>sp|Q2H139|MDV1_CHAGB Mitochondrial division protein 1 OS=Chaetomium globosum (strain
ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL
1970) GN=MDV1 PE=3 SV=2
Length = 657
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
++ G D + + D +GQ ++L GH+G V L + +++GS DR++R WDLRT
Sbjct: 516 LACGTADGMVRLWDLRSGQVSRSLVGHTGPVTCL-QFDDVHLVTGSLDRSIRIWDLRTGS 574
Query: 83 CTNVL---TPIT 91
T L TPIT
Sbjct: 575 STTPLRTTTPIT 586
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDL 78
L+ A D + V D G+ L GH+ V +L + +GS D T+R WDL
Sbjct: 330 LMVTAAMDDAVRVWDLNAGRCIGVLEGHTASVRTL-QVEDNFLATGSMDATIRLWDL 385
>sp|B8P4B0|LIS11_POSPM Nuclear distribution protein PAC1-1 OS=Postia placenta (strain ATCC
44394 / Madison 698-R) GN=PAC1-1 PE=3 SV=1
Length = 438
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGA 62
+R++ ++ + I+ G+ D + + D +GQ + LSGH+ + L ++ G
Sbjct: 295 AAIRELAGLKAATKAPGAYIATGSRDKTVKIWDVHSGQELRTLSGHNDWIRGLVFHPSGK 354
Query: 63 TVLSGSHDRTVRFWDLRTRGCTNVL 87
+LS S D+T+R W+L T C V+
Sbjct: 355 HLLSASDDKTIRVWELSTGRCMKVV 379
>sp|Q86W42|THOC6_HUMAN THO complex subunit 6 homolog OS=Homo sapiens GN=THOC6 PE=1 SV=1
Length = 341
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 18 KSSLLISGGAGDCKIYVTDCATGQAFQALSGHSG--HVLSLYNWGGATVLSGSHDRTVRF 75
++SL+++GG DC+++ D TG + L GH+ H L+L VLSG D VR
Sbjct: 138 ENSLILAGG--DCQLHTMDLETGTFTRVLRGHTDYIHCLALRE-RSPEVLSGGEDGAVRL 194
Query: 76 WDLRT 80
WDLRT
Sbjct: 195 WDLRT 199
>sp|B4QHG6|LIS1_DROSI Lissencephaly-1 homolog OS=Drosophila simulans GN=Lis-1 PE=3 SV=1
Length = 411
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80
++ G+ D I + D + G LSGH V L ++ GG ++S S D+T+R WDLR
Sbjct: 311 FLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRN 370
Query: 81 RGCTNVL 87
+ C L
Sbjct: 371 KRCMKTL 377
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG-QAFQALSGHSGHVLSL-YNW 59
H +V+DV F D K L++ + D I + D + + + GH +V S+ +
Sbjct: 149 HTDSVQDVAF--DAQGK---LLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVP 203
Query: 60 GGATVLSGSHDRTVRFWDLRTRGCTNVLT 88
G VLS S DRT++ W++ T C T
Sbjct: 204 AGDYVLSASRDRTIKMWEVATGYCVKTYT 232
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79
L+ + D I + D TG+ ++L GH+ V + ++ G + S S D +++ WD +
Sbjct: 122 LMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQ 180
>sp|B4HSL3|LIS1_DROSE Lissencephaly-1 homolog OS=Drosophila sechellia GN=Lis-1 PE=3 SV=1
Length = 411
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80
++ G+ D I + D + G LSGH V L ++ GG ++S S D+T+R WDLR
Sbjct: 311 FLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRN 370
Query: 81 RGCTNVL 87
+ C L
Sbjct: 371 KRCMKTL 377
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG-QAFQALSGHSGHVLSL-YNW 59
H +V+DV F D K L++ + D I + D + + + GH +V S+ +
Sbjct: 149 HTDSVQDVAF--DAQGK---LLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVP 203
Query: 60 GGATVLSGSHDRTVRFWDLRTRGCTNVLT 88
G VLS S DRT++ W++ T C T
Sbjct: 204 AGDYVLSASRDRTIKMWEVATGYCVKTYT 232
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79
L+ + D I + D TG+ ++L GH+ V + ++ G + S S D +++ WD +
Sbjct: 122 LMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQ 180
>sp|Q7KNS3|LIS1_DROME Lissencephaly-1 homolog OS=Drosophila melanogaster GN=Lis-1 PE=1
SV=2
Length = 411
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80
++ G+ D I + D + G LSGH V L ++ GG ++S S D+T+R WDLR
Sbjct: 311 FLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRN 370
Query: 81 RGCTNVL 87
+ C L
Sbjct: 371 KRCMKTL 377
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG-QAFQALSGHSGHVLSL-YNW 59
H +V+DV F D K L++ + D I + D + + + GH +V S+ +
Sbjct: 149 HTDSVQDVAF--DAQGK---LLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVP 203
Query: 60 GGATVLSGSHDRTVRFWDLRTRGCTNVLT 88
G VLS S DRT++ W++ T C T
Sbjct: 204 AGDYVLSASRDRTIKMWEVATGYCVKTYT 232
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79
L+ + D I + D TG+ ++L GH+ V + ++ G + S S D +++ WD +
Sbjct: 122 LMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQ 180
>sp|B4P6P9|LIS1_DROYA Lissencephaly-1 homolog OS=Drosophila yakuba GN=Lis-1 PE=3 SV=1
Length = 411
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80
++ G+ D I + D + G LSGH V L ++ GG ++S S D+T+R WDLR
Sbjct: 311 FLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRN 370
Query: 81 RGCTNVL 87
+ C L
Sbjct: 371 KRCMKTL 377
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG-QAFQALSGHSGHVLSL-YNW 59
H +V+DV F D K L++ + D I + D + + + GH +V S+ +
Sbjct: 149 HTDSVQDVAF--DAQGK---LLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVP 203
Query: 60 GGATVLSGSHDRTVRFWDLRTRGCTNVLT 88
G VLS S DRT++ W++ T C T
Sbjct: 204 AGDYVLSASRDRTIKMWEVATGYCVKTYT 232
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79
L+ + D I + D TG+ ++L GH+ V + ++ G + S S D +++ WD +
Sbjct: 122 LMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQ 180
>sp|B3NPW0|LIS1_DROER Lissencephaly-1 homolog OS=Drosophila erecta GN=Lis-1 PE=3 SV=1
Length = 411
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80
++ G+ D I + D + G LSGH V L ++ GG ++S S D+T+R WDLR
Sbjct: 311 FLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRN 370
Query: 81 RGCTNVL 87
+ C L
Sbjct: 371 KRCMKTL 377
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG-QAFQALSGHSGHVLSL-YNW 59
H +V+DV F D K L++ + D I + D + + + GH +V S+ +
Sbjct: 149 HTDSVQDVAF--DAQGK---LLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVP 203
Query: 60 GGATVLSGSHDRTVRFWDLRTRGCTNVLT 88
G VLS S DRT++ W++ T C T
Sbjct: 204 AGDYVLSASRDRTIKMWEVATGYCVKTYT 232
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79
L+ + D I + D TG+ ++L GH+ V + ++ G + S S D +++ WD +
Sbjct: 122 LMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQ 180
>sp|Q2KIG2|WDR5_BOVIN WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1
Length = 334
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H + DV + D S+LL+S + D + + D ++G+ + L GHS +V +N
Sbjct: 86 HKLGISDVAWSSD----SNLLVSA-SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLTPITVP 93
++SGS D +VR WD++T C L + P
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP 173
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
N S LI G+ D + + D TG+ + L HS V ++ +N G+ ++S S+D R
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 76 WDLRTRGCTNVL 87
WD + C L
Sbjct: 198 WDTASGQCLKTL 209
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 9 VCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLY-NW---GGATV 64
V F++ + N +L + K++ D + G+ + +GH ++ N+ GG +
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLW--DYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWI 274
Query: 65 LSGSHDRTVRFWDLRTRGCTNVL 87
+SGS D V W+L+T+ L
Sbjct: 275 VSGSEDNLVYIWNLQTKEIVQKL 297
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGA-GDCKIYVTDCATGQAFQALSGHSGHVLSL--YN 58
H V V F D SL++S G C+I+ D A+GQ + L +S ++
Sbjct: 170 HSDPVSAVHFNRD----GSLIVSSSYDGLCRIW--DTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 59 WGGATVLSGSHDRTVRFWDLRTRGCTNVLT 88
G +L+ + D T++ WD C T
Sbjct: 224 PNGKYILAATLDNTLKLWDYSKGKCLKTYT 253
>sp|Q4P9P9|LIS1_USTMA Nuclear distribution protein PAC1 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=PAC1 PE=3 SV=1
Length = 453
Score = 46.2 bits (108), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 15 TSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTV 73
+++ + ++ G+ D I + D +GQ + L+GH V L ++ G ++LS S D+T+
Sbjct: 323 SASMAGQFVATGSRDKTIRIWDSISGQCLKTLTGHDNWVRGLAFSPNGKSLLSVSDDKTM 382
Query: 74 RFWDLRTRGCTNVL 87
R WDL++ CT +
Sbjct: 383 RLWDLQSGRCTRTI 396
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG-QAFQALSGHSGHVLSL-YNW 59
H V+DV D +K + ++S + D I V D + + L GH V S+ +
Sbjct: 163 HTKAVQDV----DFDSKGNYVLSCSS-DLSIKVWDANNDYKNIKTLQGHDHSVSSVRFLP 217
Query: 60 GGATVLSGSHDRTVRFWDLRTRGCTNVL 87
G ++S S D+T++ W+ T CT L
Sbjct: 218 GDDYIVSASRDKTIKIWEFSTGFCTKTL 245
>sp|Q6AY87|THOC6_RAT THO complex subunit 6 homolog OS=Rattus norvegicus GN=Thoc6 PE=2
SV=1
Length = 341
Score = 45.8 bits (107), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 18 KSSLLISGGAGDCKIYVTDCATGQAFQALSGHSG--HVLSLYNWGGATVLSGSHDRTVRF 75
++SL+++GG DC+++ D TG +AL GH+ H L+L VLSG D VR
Sbjct: 138 ENSLILAGG--DCQLHTMDLETGTFTRALRGHTDYIHCLALRE-RSPEVLSGGEDGAVRL 194
Query: 76 WDLR 79
WDLR
Sbjct: 195 WDLR 198
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.437
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,784,440
Number of Sequences: 539616
Number of extensions: 1112657
Number of successful extensions: 6559
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 359
Number of HSP's successfully gapped in prelim test: 550
Number of HSP's that attempted gapping in prelim test: 4070
Number of HSP's gapped (non-prelim): 2614
length of query: 93
length of database: 191,569,459
effective HSP length: 63
effective length of query: 30
effective length of database: 157,573,651
effective search space: 4727209530
effective search space used: 4727209530
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)