Query psy14456
Match_columns 93
No_of_seqs 129 out of 1375
Neff 11.6
Searched_HMMs 46136
Date Fri Aug 16 20:18:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14456.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14456hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0272|consensus 99.8 3.6E-20 7.8E-25 106.9 7.6 85 2-91 302-387 (459)
2 KOG0271|consensus 99.8 8.4E-20 1.8E-24 104.9 7.6 85 2-91 114-200 (480)
3 KOG0263|consensus 99.8 1.9E-19 4.2E-24 109.6 7.4 85 2-91 534-619 (707)
4 KOG0295|consensus 99.8 1.7E-18 3.6E-23 98.8 10.6 90 2-91 276-376 (406)
5 KOG0266|consensus 99.8 7.2E-18 1.6E-22 101.1 11.0 86 2-92 202-289 (456)
6 PTZ00421 coronin; Provisional 99.8 3.1E-17 6.7E-22 98.9 12.3 86 2-91 124-210 (493)
7 KOG0266|consensus 99.8 3.1E-17 6.6E-22 98.4 11.0 84 2-90 245-331 (456)
8 KOG0279|consensus 99.8 1.9E-17 4.2E-22 91.9 9.1 85 2-89 147-232 (315)
9 KOG0271|consensus 99.8 1E-17 2.2E-22 96.4 7.9 87 2-93 156-249 (480)
10 KOG0286|consensus 99.7 2.3E-17 5E-22 92.2 9.0 84 2-89 185-269 (343)
11 KOG0286|consensus 99.7 7.5E-17 1.6E-21 90.2 9.6 85 2-92 144-230 (343)
12 KOG0285|consensus 99.7 7.3E-17 1.6E-21 92.4 9.4 84 2-90 234-318 (460)
13 KOG0272|consensus 99.7 2.9E-17 6.4E-22 95.1 6.7 85 2-91 344-430 (459)
14 PTZ00421 coronin; Provisional 99.7 6.2E-16 1.4E-20 93.4 12.1 86 2-91 74-168 (493)
15 KOG0284|consensus 99.7 1.1E-17 2.3E-22 96.7 4.2 85 2-91 221-306 (464)
16 PTZ00420 coronin; Provisional 99.7 6.9E-16 1.5E-20 94.2 12.0 85 2-91 124-209 (568)
17 KOG0316|consensus 99.7 1.8E-16 3.9E-21 86.7 8.3 85 2-91 16-101 (307)
18 KOG0319|consensus 99.7 1.5E-16 3.2E-21 97.2 8.7 87 1-92 461-548 (775)
19 KOG0285|consensus 99.7 8.8E-17 1.9E-21 92.1 7.2 85 1-90 149-234 (460)
20 KOG0291|consensus 99.7 4.1E-16 9E-21 95.8 10.2 83 2-89 349-432 (893)
21 KOG0319|consensus 99.7 2E-16 4.4E-21 96.6 8.5 85 2-91 504-589 (775)
22 KOG0263|consensus 99.7 1.3E-16 2.9E-21 97.5 7.5 87 2-93 492-579 (707)
23 KOG0302|consensus 99.7 1.7E-16 3.6E-21 91.2 7.4 87 2-93 256-349 (440)
24 KOG0284|consensus 99.7 5.6E-17 1.2E-21 93.8 5.0 85 2-91 179-264 (464)
25 KOG0265|consensus 99.7 7.9E-16 1.7E-20 86.3 9.2 85 2-91 46-132 (338)
26 KOG0282|consensus 99.7 4.6E-17 1E-21 95.5 4.5 86 2-91 213-300 (503)
27 KOG0292|consensus 99.7 3.6E-16 7.7E-21 97.6 8.3 85 2-91 50-135 (1202)
28 KOG0273|consensus 99.7 1.2E-15 2.5E-20 89.7 9.9 87 2-89 400-492 (524)
29 KOG0318|consensus 99.7 1.5E-15 3.3E-20 90.3 10.1 83 2-89 189-275 (603)
30 KOG0315|consensus 99.7 1.9E-15 4.2E-20 83.2 9.8 86 1-91 213-300 (311)
31 KOG0265|consensus 99.6 1.5E-15 3.3E-20 85.2 7.7 83 1-88 88-172 (338)
32 KOG0273|consensus 99.6 6.8E-15 1.5E-19 86.6 8.8 87 2-93 358-454 (524)
33 KOG0283|consensus 99.6 2.9E-15 6.4E-20 92.1 7.5 75 2-83 368-444 (712)
34 PTZ00420 coronin; Provisional 99.6 2.9E-14 6.2E-19 87.3 11.5 82 2-87 73-164 (568)
35 KOG0264|consensus 99.6 7.5E-15 1.6E-19 85.5 8.2 75 2-80 271-348 (422)
36 KOG0264|consensus 99.6 5.5E-15 1.2E-19 86.1 7.2 86 2-91 226-316 (422)
37 KOG0276|consensus 99.6 3.1E-15 6.8E-20 90.7 6.4 86 2-91 139-227 (794)
38 KOG0289|consensus 99.6 1.2E-14 2.5E-19 85.0 8.1 80 5-89 349-429 (506)
39 KOG0303|consensus 99.6 9.8E-15 2.1E-19 84.6 7.7 85 2-91 130-215 (472)
40 KOG0296|consensus 99.6 4.7E-14 1E-18 80.9 10.0 81 2-87 63-144 (399)
41 KOG0275|consensus 99.6 3.5E-16 7.7E-21 89.1 1.5 86 1-91 261-348 (508)
42 KOG0281|consensus 99.6 1.7E-15 3.7E-20 86.9 4.0 79 4-91 198-277 (499)
43 KOG0647|consensus 99.6 4.3E-14 9.3E-19 79.6 9.4 80 2-87 71-153 (347)
44 KOG0279|consensus 99.6 3.8E-14 8.3E-19 79.0 9.0 74 2-80 62-136 (315)
45 KOG0275|consensus 99.6 2.3E-15 5E-20 85.9 4.3 85 1-90 304-389 (508)
46 KOG0295|consensus 99.6 2.8E-14 6.1E-19 81.8 8.0 87 2-93 192-279 (406)
47 KOG1273|consensus 99.6 2.4E-14 5.1E-19 81.3 7.3 78 6-88 26-104 (405)
48 KOG1034|consensus 99.6 2.6E-14 5.5E-19 81.3 7.1 76 2-81 134-213 (385)
49 KOG0643|consensus 99.6 1.2E-13 2.7E-18 76.9 9.4 82 2-88 9-91 (327)
50 KOG0315|consensus 99.5 1.2E-13 2.5E-18 76.4 8.7 81 2-88 82-163 (311)
51 KOG0277|consensus 99.5 1.2E-13 2.7E-18 76.4 8.8 86 2-91 103-190 (311)
52 KOG0308|consensus 99.5 7.9E-14 1.7E-18 84.8 8.7 85 2-91 170-255 (735)
53 KOG0645|consensus 99.5 3.1E-13 6.8E-18 75.3 10.4 85 2-91 60-150 (312)
54 KOG0281|consensus 99.5 9.9E-15 2.1E-19 83.8 4.3 82 2-91 319-400 (499)
55 cd00200 WD40 WD40 domain, foun 99.5 5.6E-13 1.2E-17 74.1 11.2 84 2-90 8-92 (289)
56 KOG0647|consensus 99.5 1.1E-13 2.4E-18 78.0 7.6 84 3-91 27-113 (347)
57 PLN00181 protein SPA1-RELATED; 99.5 6.1E-13 1.3E-17 84.5 11.6 83 3-89 532-616 (793)
58 KOG0316|consensus 99.5 1.1E-13 2.5E-18 76.0 7.1 81 2-87 58-141 (307)
59 KOG1407|consensus 99.5 5.4E-14 1.2E-18 78.0 5.9 52 42-93 181-233 (313)
60 KOG0310|consensus 99.5 6.2E-13 1.3E-17 78.5 10.4 82 2-87 109-193 (487)
61 KOG0269|consensus 99.5 7.9E-14 1.7E-18 86.0 6.9 41 42-82 212-253 (839)
62 KOG0313|consensus 99.5 1.1E-13 2.5E-18 79.8 7.0 82 4-90 301-388 (423)
63 KOG0274|consensus 99.5 1.2E-13 2.6E-18 84.2 7.4 82 2-91 330-413 (537)
64 KOG0274|consensus 99.5 7.8E-13 1.7E-17 80.8 10.9 86 2-93 248-333 (537)
65 KOG0282|consensus 99.5 2.3E-14 4.9E-19 84.5 4.0 82 2-89 257-340 (503)
66 KOG0641|consensus 99.5 1E-12 2.2E-17 72.2 9.9 89 1-89 134-222 (350)
67 KOG0291|consensus 99.5 6.6E-13 1.4E-17 82.1 10.0 85 4-92 308-393 (893)
68 KOG0277|consensus 99.5 5.9E-13 1.3E-17 73.8 8.7 86 2-91 146-234 (311)
69 KOG0276|consensus 99.5 4.7E-13 1E-17 81.5 9.0 86 1-91 95-183 (794)
70 KOG0640|consensus 99.5 1.9E-13 4.1E-18 77.7 6.8 84 2-90 260-346 (430)
71 KOG0294|consensus 99.5 5E-13 1.1E-17 75.7 8.3 83 2-91 42-127 (362)
72 KOG0283|consensus 99.5 1.4E-13 3E-18 85.0 6.5 83 1-89 265-408 (712)
73 KOG0973|consensus 99.5 6.8E-13 1.5E-17 83.9 9.2 86 2-92 68-172 (942)
74 KOG0292|consensus 99.5 7.1E-14 1.5E-18 87.7 4.8 83 3-90 9-92 (1202)
75 KOG0306|consensus 99.5 1.9E-13 4.1E-18 84.4 6.4 85 2-91 549-634 (888)
76 KOG0294|consensus 99.5 1.2E-12 2.7E-17 74.2 8.5 83 2-87 82-165 (362)
77 PLN00181 protein SPA1-RELATED; 99.5 4.4E-12 9.6E-17 80.7 11.9 85 2-91 574-661 (793)
78 KOG0645|consensus 99.5 3.6E-12 7.8E-17 71.1 10.1 85 2-91 104-195 (312)
79 KOG0305|consensus 99.5 6.3E-13 1.4E-17 79.7 7.5 82 2-88 300-385 (484)
80 KOG0303|consensus 99.5 3.3E-13 7.1E-18 78.4 6.1 83 2-88 80-171 (472)
81 KOG0649|consensus 99.4 3E-12 6.4E-17 70.9 9.3 80 5-89 116-196 (325)
82 KOG0639|consensus 99.4 1.3E-13 2.9E-18 82.3 3.7 75 6-85 512-587 (705)
83 KOG0278|consensus 99.4 1.2E-12 2.7E-17 72.5 7.2 73 5-82 226-300 (334)
84 cd00200 WD40 WD40 domain, foun 99.4 6.1E-12 1.3E-16 70.0 10.1 84 2-90 176-260 (289)
85 KOG1407|consensus 99.4 1.4E-12 3E-17 72.5 7.1 83 1-88 187-270 (313)
86 KOG2394|consensus 99.4 6.9E-13 1.5E-17 79.6 6.1 83 3-90 290-373 (636)
87 KOG0296|consensus 99.4 1.4E-11 3E-16 71.0 11.1 87 2-93 105-192 (399)
88 KOG0299|consensus 99.4 7E-13 1.5E-17 78.0 5.8 85 2-91 201-286 (479)
89 KOG0302|consensus 99.4 2.3E-12 5.1E-17 74.6 7.9 75 1-80 300-379 (440)
90 KOG1539|consensus 99.4 2.4E-12 5.2E-17 80.3 8.3 83 1-88 491-615 (910)
91 KOG1445|consensus 99.4 3.3E-13 7.2E-18 82.7 4.5 78 1-82 675-753 (1012)
92 KOG0973|consensus 99.4 2.1E-12 4.6E-17 81.7 8.2 83 2-89 128-211 (942)
93 KOG1034|consensus 99.4 4.9E-12 1.1E-16 72.2 8.6 87 2-89 88-176 (385)
94 KOG0289|consensus 99.4 8.7E-12 1.9E-16 73.3 9.4 87 2-93 302-391 (506)
95 KOG0270|consensus 99.4 7.8E-13 1.7E-17 77.5 5.1 75 2-80 242-318 (463)
96 KOG0267|consensus 99.4 1.9E-13 4.1E-18 84.0 2.6 85 2-91 69-154 (825)
97 KOG0640|consensus 99.4 2.2E-12 4.7E-17 73.5 6.5 81 3-88 216-300 (430)
98 KOG1446|consensus 99.4 2.1E-11 4.5E-16 69.0 10.4 80 3-87 14-138 (311)
99 KOG0772|consensus 99.4 9.3E-13 2E-17 78.8 5.2 81 5-90 319-406 (641)
100 KOG0318|consensus 99.4 7E-12 1.5E-16 75.1 8.6 77 2-83 486-564 (603)
101 KOG1009|consensus 99.4 5.3E-12 1.1E-16 73.5 7.9 85 2-91 64-165 (434)
102 KOG0293|consensus 99.4 1.7E-12 3.6E-17 76.0 5.4 62 19-80 451-514 (519)
103 KOG0269|consensus 99.4 4.7E-12 1E-16 78.5 7.1 86 1-91 218-309 (839)
104 KOG0293|consensus 99.3 7.1E-12 1.5E-16 73.5 7.3 82 2-88 223-308 (519)
105 KOG0305|consensus 99.3 5.7E-12 1.2E-16 75.7 6.3 84 2-92 259-344 (484)
106 KOG0290|consensus 99.3 1.5E-11 3.2E-16 69.5 7.5 76 1-80 194-319 (364)
107 KOG4283|consensus 99.3 2.3E-11 4.9E-16 69.0 8.2 86 4-91 144-232 (397)
108 KOG4283|consensus 99.3 1.3E-11 2.8E-16 69.9 7.0 77 2-82 187-279 (397)
109 KOG0646|consensus 99.3 1.4E-11 3E-16 72.7 6.5 85 3-92 81-175 (476)
110 KOG0267|consensus 99.3 1.1E-11 2.3E-16 76.6 6.2 85 2-91 111-196 (825)
111 KOG0278|consensus 99.3 4E-12 8.7E-17 70.6 3.9 82 2-88 99-182 (334)
112 KOG0306|consensus 99.3 4.4E-11 9.5E-16 74.3 8.4 84 3-91 508-592 (888)
113 KOG0313|consensus 99.3 3.6E-11 7.9E-16 69.7 7.1 73 2-79 344-418 (423)
114 PF08662 eIF2A: Eukaryotic tra 99.3 2.2E-10 4.9E-15 62.3 9.9 78 4-88 60-142 (194)
115 KOG1036|consensus 99.2 1.5E-10 3.2E-15 65.6 8.7 73 2-81 53-126 (323)
116 KOG1007|consensus 99.2 5.3E-11 1.1E-15 67.3 6.7 75 2-80 213-290 (370)
117 KOG0288|consensus 99.2 4.5E-12 9.7E-17 74.0 2.5 81 4-89 220-301 (459)
118 KOG0643|consensus 99.2 1.2E-10 2.6E-15 65.2 7.8 83 2-89 146-230 (327)
119 KOG0301|consensus 99.2 2.8E-10 6E-15 70.2 9.9 78 2-88 178-256 (745)
120 KOG0310|consensus 99.2 2.2E-10 4.7E-15 68.1 8.8 80 2-87 195-276 (487)
121 KOG2111|consensus 99.2 3.6E-10 7.7E-15 64.5 9.3 77 1-81 179-258 (346)
122 PF00400 WD40: WD domain, G-be 99.2 1.2E-10 2.6E-15 47.6 5.6 37 41-77 2-39 (39)
123 KOG4328|consensus 99.2 2E-10 4.3E-15 68.0 7.7 78 1-81 184-267 (498)
124 KOG3914|consensus 99.2 1.6E-10 3.4E-15 67.3 6.5 82 2-88 150-232 (390)
125 KOG0771|consensus 99.2 1.4E-10 3E-15 67.7 6.0 76 7-88 148-224 (398)
126 KOG1445|consensus 99.2 2.3E-10 4.9E-15 70.7 7.0 82 4-90 129-212 (1012)
127 KOG0308|consensus 99.2 7.6E-10 1.7E-14 68.0 9.1 76 2-82 212-288 (735)
128 KOG1274|consensus 99.1 5.3E-10 1.1E-14 70.7 8.5 82 3-89 96-178 (933)
129 KOG0321|consensus 99.1 1.3E-10 2.8E-15 71.2 5.7 76 1-81 98-177 (720)
130 KOG0646|consensus 99.1 1.2E-09 2.7E-14 64.8 9.4 81 2-87 122-214 (476)
131 KOG1007|consensus 99.1 1.7E-10 3.8E-15 65.3 5.6 85 3-91 170-258 (370)
132 KOG1446|consensus 99.1 3.6E-09 7.9E-14 60.1 10.8 81 4-89 188-272 (311)
133 PF08662 eIF2A: Eukaryotic tra 99.1 2.8E-09 6E-14 58.1 10.1 78 2-86 99-185 (194)
134 KOG1539|consensus 99.1 6.6E-10 1.4E-14 69.8 8.4 70 2-77 575-646 (910)
135 KOG1538|consensus 99.1 3.4E-10 7.3E-15 70.3 7.0 69 5-79 14-83 (1081)
136 KOG0772|consensus 99.1 1.9E-10 4.1E-15 69.2 5.7 75 2-80 267-348 (641)
137 KOG0301|consensus 99.1 3.7E-10 8.1E-15 69.7 7.0 80 2-91 139-219 (745)
138 KOG0322|consensus 99.1 1.4E-10 3.1E-15 64.8 4.8 69 5-78 253-322 (323)
139 KOG0300|consensus 99.1 6.1E-10 1.3E-14 64.0 7.4 81 2-88 313-396 (481)
140 KOG2110|consensus 99.1 3.7E-09 8.1E-14 61.4 9.9 73 19-91 141-216 (391)
141 KOG0288|consensus 99.1 4.3E-10 9.3E-15 66.0 6.1 66 6-76 390-458 (459)
142 KOG0641|consensus 99.1 2.1E-09 4.5E-14 59.4 8.3 73 3-80 231-304 (350)
143 KOG1332|consensus 99.1 5.6E-10 1.2E-14 62.0 6.0 63 19-82 23-91 (299)
144 KOG1272|consensus 99.1 2.1E-10 4.6E-15 68.2 4.6 69 21-89 264-333 (545)
145 KOG0300|consensus 99.1 4.1E-10 8.9E-15 64.7 5.5 85 2-91 271-357 (481)
146 KOG1310|consensus 99.1 1.3E-09 2.9E-14 66.3 7.7 74 2-80 49-126 (758)
147 KOG2110|consensus 99.1 4.2E-09 9E-14 61.2 9.3 77 1-81 171-250 (391)
148 KOG0644|consensus 99.1 6.6E-11 1.4E-15 74.5 1.9 85 2-91 189-274 (1113)
149 KOG0290|consensus 99.1 4.6E-09 9.9E-14 59.7 8.7 85 2-90 149-238 (364)
150 KOG2394|consensus 99.0 1.6E-09 3.6E-14 65.5 7.3 50 4-58 333-383 (636)
151 KOG0299|consensus 99.0 2.1E-09 4.6E-14 63.7 7.4 85 2-91 141-244 (479)
152 KOG2445|consensus 99.0 6.3E-09 1.4E-13 59.4 8.4 73 2-79 12-91 (361)
153 KOG0268|consensus 99.0 3.2E-10 7E-15 65.7 3.4 73 2-80 65-138 (433)
154 KOG0321|consensus 99.0 1.1E-09 2.3E-14 67.3 5.5 80 2-85 143-254 (720)
155 KOG0642|consensus 99.0 5.2E-09 1.1E-13 63.5 8.0 77 2-83 343-430 (577)
156 TIGR03866 PQQ_ABC_repeats PQQ- 99.0 2.4E-08 5.2E-13 56.7 10.4 79 7-91 210-291 (300)
157 KOG1332|consensus 99.0 3.1E-09 6.6E-14 59.1 6.2 79 1-82 100-196 (299)
158 KOG0268|consensus 99.0 1.1E-09 2.3E-14 63.6 4.6 79 2-85 271-351 (433)
159 KOG4378|consensus 99.0 6.7E-09 1.4E-13 62.7 7.8 86 1-91 206-293 (673)
160 KOG1063|consensus 99.0 5E-09 1.1E-13 65.0 7.4 75 2-81 571-650 (764)
161 KOG2919|consensus 99.0 3.4E-09 7.5E-14 60.9 6.1 80 2-85 249-334 (406)
162 KOG0639|consensus 98.9 3.4E-09 7.3E-14 64.0 5.8 84 4-92 466-552 (705)
163 KOG1408|consensus 98.9 1.5E-08 3.2E-13 63.7 8.5 83 4-91 597-683 (1080)
164 KOG4328|consensus 98.9 6.7E-09 1.4E-13 61.8 6.7 75 1-79 320-399 (498)
165 KOG2096|consensus 98.9 2.1E-08 4.6E-13 57.8 8.5 82 2-89 85-226 (420)
166 KOG1274|consensus 98.9 1.6E-08 3.5E-13 64.3 8.3 83 2-89 137-228 (933)
167 KOG0307|consensus 98.9 1.5E-09 3.2E-14 69.8 3.8 84 2-89 115-202 (1049)
168 KOG0307|consensus 98.9 4.6E-09 9.9E-14 67.7 5.9 83 5-89 208-294 (1049)
169 KOG1009|consensus 98.9 1.2E-08 2.6E-13 59.9 7.0 72 4-79 14-95 (434)
170 COG2319 FOG: WD40 repeat [Gene 98.9 1.1E-07 2.3E-12 55.3 11.0 85 2-90 154-241 (466)
171 KOG0642|consensus 98.9 3.7E-09 8.1E-14 64.0 4.8 73 2-79 293-374 (577)
172 KOG2445|consensus 98.9 2E-08 4.4E-13 57.4 7.4 76 2-79 222-318 (361)
173 PF00400 WD40: WD domain, G-be 98.9 1.1E-08 2.3E-13 41.7 4.8 30 2-36 10-39 (39)
174 KOG1188|consensus 98.9 1.1E-08 2.4E-13 59.0 6.3 62 21-83 42-106 (376)
175 TIGR03866 PQQ_ABC_repeats PQQ- 98.9 1.7E-07 3.7E-12 53.2 11.1 79 5-88 32-112 (300)
176 KOG1408|consensus 98.9 1.2E-08 2.7E-13 64.0 6.6 74 2-80 640-714 (1080)
177 KOG2048|consensus 98.8 3.5E-08 7.6E-13 61.1 7.9 82 3-90 154-244 (691)
178 KOG1188|consensus 98.8 2.1E-08 4.6E-13 57.9 6.6 35 47-81 162-198 (376)
179 KOG1524|consensus 98.8 1.7E-08 3.6E-13 61.6 6.1 83 2-90 103-226 (737)
180 KOG1063|consensus 98.8 3.3E-08 7.1E-13 61.5 7.5 76 2-81 524-604 (764)
181 KOG4227|consensus 98.8 3.8E-08 8.2E-13 58.3 7.4 82 2-88 55-144 (609)
182 KOG2919|consensus 98.8 4.1E-08 8.9E-13 56.7 7.1 74 4-81 208-283 (406)
183 KOG4714|consensus 98.8 3.7E-09 8E-14 59.3 2.9 72 5-80 181-255 (319)
184 KOG1273|consensus 98.8 8.9E-08 1.9E-12 55.2 8.4 71 2-78 64-136 (405)
185 KOG4378|consensus 98.8 3.7E-08 8E-13 59.6 6.9 77 4-84 165-244 (673)
186 KOG2055|consensus 98.8 1.4E-07 3E-12 56.5 9.1 73 3-80 344-418 (514)
187 KOG4547|consensus 98.8 1.3E-07 2.9E-12 57.6 9.1 85 2-93 101-186 (541)
188 KOG0270|consensus 98.8 2.3E-07 5E-12 55.2 9.3 86 2-92 285-374 (463)
189 KOG0650|consensus 98.8 1.2E-07 2.7E-12 58.4 8.3 71 2-78 399-471 (733)
190 KOG1036|consensus 98.8 3.2E-08 7E-13 56.4 5.2 60 5-69 234-294 (323)
191 KOG3881|consensus 98.7 4.6E-08 1E-12 57.3 6.0 76 4-84 248-325 (412)
192 KOG0280|consensus 98.7 1.7E-07 3.7E-12 53.5 7.5 75 2-80 164-242 (339)
193 KOG2048|consensus 98.7 6.4E-07 1.4E-11 55.8 9.9 79 4-87 111-192 (691)
194 KOG1963|consensus 98.7 2.6E-07 5.6E-12 58.6 8.3 76 2-82 204-284 (792)
195 PF11768 DUF3312: Protein of u 98.7 6.2E-07 1.3E-11 55.0 9.7 73 3-82 259-332 (545)
196 KOG0974|consensus 98.7 2.1E-07 4.6E-12 59.9 7.8 81 2-90 174-256 (967)
197 KOG2139|consensus 98.7 2.6E-07 5.6E-12 54.1 7.5 72 4-79 196-268 (445)
198 KOG2695|consensus 98.7 7.7E-08 1.7E-12 56.0 5.4 83 2-88 297-385 (425)
199 KOG1587|consensus 98.7 7.3E-08 1.6E-12 59.6 5.3 76 1-81 396-474 (555)
200 KOG0649|consensus 98.6 5E-07 1.1E-11 50.7 7.8 82 2-91 61-156 (325)
201 KOG2096|consensus 98.6 1.5E-07 3.1E-12 54.5 5.8 70 5-79 230-308 (420)
202 KOG2106|consensus 98.6 8.4E-07 1.8E-11 54.0 8.6 67 4-77 247-314 (626)
203 KOG1310|consensus 98.6 1.8E-07 3.9E-12 57.4 5.8 76 2-80 92-179 (758)
204 KOG1587|consensus 98.6 5.5E-07 1.2E-11 55.9 7.9 74 3-80 242-324 (555)
205 KOG0644|consensus 98.6 1.9E-08 4.1E-13 63.9 1.2 69 2-79 231-300 (1113)
206 KOG1963|consensus 98.6 8.8E-07 1.9E-11 56.3 8.2 82 2-89 250-332 (792)
207 KOG2055|consensus 98.6 9.4E-07 2E-11 53.1 7.9 77 6-88 306-383 (514)
208 KOG2111|consensus 98.6 2.4E-06 5.3E-11 49.3 9.2 72 19-90 148-223 (346)
209 KOG1523|consensus 98.5 8.3E-07 1.8E-11 51.3 7.1 76 1-81 53-132 (361)
210 COG2319 FOG: WD40 repeat [Gene 98.5 2.9E-06 6.3E-11 49.3 9.7 77 2-83 197-275 (466)
211 KOG4227|consensus 98.5 2.7E-06 5.9E-11 50.7 8.7 76 2-82 104-182 (609)
212 PF02239 Cytochrom_D1: Cytochr 98.5 3.4E-06 7.4E-11 50.3 9.3 76 8-89 41-118 (369)
213 KOG0771|consensus 98.5 1.5E-06 3.3E-11 51.4 7.4 81 2-88 185-320 (398)
214 KOG2321|consensus 98.5 1.8E-06 4E-11 53.3 7.8 78 4-86 176-265 (703)
215 KOG2139|consensus 98.5 2.7E-06 6E-11 50.0 7.9 79 3-87 140-234 (445)
216 KOG0650|consensus 98.4 9.6E-07 2.1E-11 54.7 5.8 48 42-89 392-440 (733)
217 KOG1409|consensus 98.4 1.1E-06 2.3E-11 51.3 5.6 75 2-81 196-272 (404)
218 KOG0974|consensus 98.4 8.7E-06 1.9E-10 52.9 9.0 72 20-91 145-218 (967)
219 KOG1272|consensus 98.3 2E-06 4.4E-11 51.9 5.5 67 2-76 292-359 (545)
220 KOG1523|consensus 98.3 6.6E-06 1.4E-10 47.7 7.2 74 3-81 10-87 (361)
221 smart00320 WD40 WD40 repeats. 98.3 4.6E-06 1E-10 32.4 5.1 37 41-77 3-40 (40)
222 KOG2106|consensus 98.3 2.5E-05 5.4E-10 47.9 9.8 33 50-82 447-480 (626)
223 KOG1240|consensus 98.3 1.2E-05 2.6E-10 53.5 8.6 75 2-80 1047-1129(1431)
224 KOG1538|consensus 98.2 1.5E-06 3.3E-11 54.8 3.5 32 2-38 52-83 (1081)
225 KOG2695|consensus 98.2 2.4E-06 5.3E-11 50.0 3.8 79 6-90 255-343 (425)
226 KOG0322|consensus 98.2 5.2E-06 1.1E-10 47.1 4.8 85 2-91 204-293 (323)
227 KOG1334|consensus 98.1 2.3E-06 5E-11 51.9 2.8 72 5-80 395-467 (559)
228 KOG1524|consensus 98.1 6.3E-06 1.4E-10 50.8 4.7 54 1-60 184-238 (737)
229 KOG2315|consensus 98.1 6E-05 1.3E-09 46.5 8.4 80 3-88 270-353 (566)
230 KOG1064|consensus 98.1 3.1E-06 6.6E-11 58.2 3.0 73 2-88 2335-2407(2439)
231 KOG0280|consensus 98.1 8.6E-05 1.9E-09 42.9 8.2 69 6-79 124-196 (339)
232 PRK01742 tolB translocation pr 98.1 0.00016 3.4E-09 44.1 9.6 74 2-82 202-283 (429)
233 PF02239 Cytochrom_D1: Cytochr 98.0 0.00014 3E-09 43.6 9.1 71 19-89 5-76 (369)
234 KOG4640|consensus 98.0 7E-05 1.5E-09 47.0 7.9 76 5-86 22-99 (665)
235 PRK05137 tolB translocation pr 98.0 0.00021 4.6E-09 43.5 10.0 78 2-84 200-283 (435)
236 KOG1645|consensus 98.0 3.4E-05 7.3E-10 46.1 6.3 76 2-82 192-269 (463)
237 KOG3881|consensus 98.0 7.7E-05 1.7E-09 44.4 7.6 78 6-86 205-284 (412)
238 KOG4497|consensus 98.0 0.00011 2.3E-09 43.3 7.7 75 5-83 50-126 (447)
239 KOG2315|consensus 98.0 7.6E-05 1.7E-09 46.1 7.3 72 3-79 311-390 (566)
240 PF15492 Nbas_N: Neuroblastoma 98.0 0.00034 7.3E-09 40.2 9.2 44 50-93 229-273 (282)
241 KOG1517|consensus 98.0 7.8E-05 1.7E-09 49.5 7.4 61 19-80 1221-1288(1387)
242 PRK11028 6-phosphogluconolacto 98.0 0.00013 2.7E-09 42.8 7.9 70 6-80 128-206 (330)
243 PRK01742 tolB translocation pr 97.9 9.7E-05 2.1E-09 44.9 7.3 73 4-84 292-366 (429)
244 KOG1064|consensus 97.9 1E-05 2.2E-10 55.9 3.3 65 21-87 2304-2374(2439)
245 smart00320 WD40 WD40 repeats. 97.9 2.7E-05 5.9E-10 30.1 3.6 30 2-36 11-40 (40)
246 KOG2041|consensus 97.9 8.1E-05 1.8E-09 47.8 6.5 74 4-82 15-104 (1189)
247 KOG1275|consensus 97.9 9.7E-05 2.1E-09 48.3 6.6 66 20-86 187-261 (1118)
248 KOG4190|consensus 97.9 1.7E-05 3.7E-10 49.5 3.1 75 2-83 734-816 (1034)
249 KOG1240|consensus 97.8 0.00062 1.3E-08 46.0 9.3 83 3-90 1195-1284(1431)
250 KOG1517|consensus 97.8 0.00025 5.4E-09 47.3 7.3 78 9-91 1171-1254(1387)
251 KOG1912|consensus 97.8 0.0004 8.7E-09 45.1 8.1 87 1-87 53-151 (1062)
252 KOG4547|consensus 97.8 0.00034 7.3E-09 43.4 7.4 70 4-80 145-221 (541)
253 KOG4532|consensus 97.7 0.00099 2.1E-08 38.4 8.2 72 6-82 161-236 (344)
254 PRK02889 tolB translocation pr 97.7 0.00069 1.5E-08 41.3 8.1 71 3-78 195-269 (427)
255 PRK11028 6-phosphogluconolacto 97.7 0.00064 1.4E-08 39.9 7.7 68 8-79 232-304 (330)
256 PRK05137 tolB translocation pr 97.7 0.0016 3.5E-08 39.8 9.4 76 4-84 246-327 (435)
257 PRK03629 tolB translocation pr 97.7 0.0018 3.9E-08 39.6 9.5 74 5-83 244-323 (429)
258 PRK04922 tolB translocation pr 97.7 0.0011 2.4E-08 40.5 8.6 77 3-84 203-285 (433)
259 PRK00178 tolB translocation pr 97.7 0.0021 4.6E-08 39.1 9.7 77 3-84 198-280 (430)
260 KOG1409|consensus 97.6 0.0017 3.7E-08 38.5 8.8 40 42-81 189-229 (404)
261 PRK03629 tolB translocation pr 97.6 0.0024 5.2E-08 39.1 9.9 78 4-86 199-282 (429)
262 PRK02889 tolB translocation pr 97.6 0.0014 3.1E-08 40.0 8.4 75 5-84 285-365 (427)
263 KOG0882|consensus 97.6 0.00035 7.6E-09 42.6 5.3 84 1-89 142-241 (558)
264 TIGR02658 TTQ_MADH_Hv methylam 97.5 0.0054 1.2E-07 36.8 10.0 74 11-88 53-145 (352)
265 PRK04922 tolB translocation pr 97.5 0.0039 8.4E-08 38.2 9.5 74 6-84 294-373 (433)
266 TIGR02800 propeller_TolB tol-p 97.5 0.0041 8.8E-08 37.6 9.5 75 4-83 190-270 (417)
267 PRK01029 tolB translocation pr 97.4 0.003 6.5E-08 38.7 8.1 76 6-85 283-365 (428)
268 KOG2079|consensus 97.4 0.0018 3.9E-08 43.4 7.3 65 3-72 130-198 (1206)
269 COG4946 Uncharacterized protei 97.4 0.012 2.5E-07 36.8 10.0 77 4-85 402-483 (668)
270 KOG0309|consensus 97.3 0.00084 1.8E-08 43.5 5.3 84 2-89 113-199 (1081)
271 PLN02919 haloacid dehalogenase 97.3 0.0079 1.7E-07 40.9 9.7 72 7-83 807-892 (1057)
272 PRK01029 tolB translocation pr 97.3 0.012 2.7E-07 36.1 9.8 78 5-87 328-411 (428)
273 KOG4532|consensus 97.3 0.011 2.4E-07 34.3 9.0 68 20-87 215-290 (344)
274 KOG1912|consensus 97.3 0.0014 3.1E-08 42.7 5.8 81 3-90 15-108 (1062)
275 PF14655 RAB3GAP2_N: Rab3 GTPa 97.3 0.012 2.5E-07 36.2 9.5 80 5-89 309-408 (415)
276 PRK04792 tolB translocation pr 97.3 0.0087 1.9E-07 36.9 9.1 75 4-83 218-298 (448)
277 TIGR02658 TTQ_MADH_Hv methylam 97.2 0.016 3.4E-07 34.9 12.0 57 30-87 279-338 (352)
278 KOG2321|consensus 97.2 0.002 4.4E-08 40.6 5.9 65 22-87 148-213 (703)
279 KOG3617|consensus 97.2 0.00052 1.1E-08 45.2 3.5 70 5-79 61-131 (1416)
280 PF10282 Lactonase: Lactonase, 97.2 0.018 3.9E-07 34.3 10.7 76 5-84 246-329 (345)
281 PRK00178 tolB translocation pr 97.2 0.015 3.2E-07 35.6 9.3 74 6-84 245-324 (430)
282 PF12894 Apc4_WD40: Anaphase-p 97.1 0.0031 6.7E-08 26.7 4.6 30 4-38 12-41 (47)
283 TIGR02800 propeller_TolB tol-p 97.1 0.019 4.1E-07 34.8 9.3 73 6-83 280-358 (417)
284 PRK04792 tolB translocation pr 97.1 0.019 4E-07 35.6 9.4 74 6-84 264-343 (448)
285 KOG4190|consensus 97.1 0.0024 5.3E-08 40.4 5.3 40 50-89 876-916 (1034)
286 PLN02919 haloacid dehalogenase 97.0 0.044 9.5E-07 37.6 11.2 75 6-84 742-838 (1057)
287 KOG1832|consensus 97.0 0.0021 4.6E-08 42.8 5.0 82 2-88 1100-1185(1516)
288 KOG2079|consensus 97.0 0.0034 7.4E-08 42.2 5.8 72 21-93 101-174 (1206)
289 PF12894 Apc4_WD40: Anaphase-p 96.9 0.0072 1.6E-07 25.6 4.6 32 50-82 11-43 (47)
290 KOG4497|consensus 96.9 0.011 2.3E-07 35.3 6.6 60 4-68 92-152 (447)
291 KOG1334|consensus 96.8 0.0022 4.8E-08 39.6 3.8 73 2-79 141-217 (559)
292 KOG4714|consensus 96.8 0.011 2.3E-07 34.2 6.0 35 1-39 221-255 (319)
293 KOG1354|consensus 96.8 0.0023 4.9E-08 38.1 3.5 81 5-90 215-313 (433)
294 KOG2314|consensus 96.8 0.0092 2E-07 37.7 6.1 75 7-89 214-300 (698)
295 PRK02888 nitrous-oxide reducta 96.7 0.023 5E-07 36.6 7.6 72 5-80 322-405 (635)
296 PF10313 DUF2415: Uncharacteri 96.7 0.012 2.5E-07 24.5 4.5 34 4-39 1-34 (43)
297 KOG0309|consensus 96.7 0.0022 4.7E-08 41.8 2.9 71 6-81 161-234 (1081)
298 COG2706 3-carboxymuconate cycl 96.6 0.063 1.4E-06 32.2 9.2 71 6-81 147-223 (346)
299 KOG0882|consensus 96.6 0.0015 3.2E-08 40.1 1.8 78 1-84 7-89 (558)
300 KOG2041|consensus 96.6 0.0082 1.8E-07 39.3 5.0 73 2-79 70-145 (1189)
301 KOG3621|consensus 96.6 0.01 2.2E-07 38.3 5.3 70 6-80 79-155 (726)
302 COG5354 Uncharacterized protei 96.4 0.021 4.5E-07 35.8 5.7 80 5-92 34-129 (561)
303 KOG4640|consensus 96.3 0.015 3.3E-07 37.1 5.1 52 2-58 60-114 (665)
304 KOG1354|consensus 96.3 0.017 3.7E-07 34.6 5.0 75 1-81 162-246 (433)
305 KOG4649|consensus 96.3 0.098 2.1E-06 30.6 8.9 66 20-87 64-131 (354)
306 TIGR03300 assembly_YfgL outer 95.9 0.17 3.7E-06 30.4 8.3 67 21-88 281-347 (377)
307 PF15492 Nbas_N: Neuroblastoma 95.9 0.16 3.6E-06 29.6 9.5 67 19-88 9-81 (282)
308 PF10313 DUF2415: Uncharacteri 95.8 0.043 9.4E-07 22.8 5.0 30 52-81 2-35 (43)
309 KOG3914|consensus 95.8 0.053 1.2E-06 32.9 5.5 53 29-82 131-184 (390)
310 PF08450 SGL: SMP-30/Gluconola 95.8 0.16 3.5E-06 28.7 10.5 78 6-88 136-221 (246)
311 COG4946 Uncharacterized protei 95.7 0.29 6.2E-06 31.0 10.0 74 4-83 360-435 (668)
312 COG5170 CDC55 Serine/threonine 95.6 0.019 4.1E-07 34.1 3.1 81 5-90 223-321 (460)
313 PF06433 Me-amine-dh_H: Methyl 95.5 0.23 4.9E-06 30.0 7.2 58 31-89 270-330 (342)
314 COG5354 Uncharacterized protei 95.5 0.35 7.7E-06 30.7 8.3 73 3-81 274-350 (561)
315 KOG2444|consensus 95.3 0.077 1.7E-06 30.1 4.6 59 22-80 116-178 (238)
316 PF10282 Lactonase: Lactonase, 95.2 0.35 7.5E-06 29.0 10.4 71 5-79 145-222 (345)
317 KOG2314|consensus 94.9 0.23 5.1E-06 31.9 6.2 61 5-70 494-558 (698)
318 PF11768 DUF3312: Protein of u 94.8 0.33 7.2E-06 31.1 6.8 36 48-83 257-293 (545)
319 PRK04043 tolB translocation pr 94.6 0.63 1.4E-05 28.9 9.8 77 5-86 234-316 (419)
320 PF11715 Nup160: Nucleoporin N 94.5 0.21 4.5E-06 31.8 5.7 28 60-87 229-256 (547)
321 PF08553 VID27: VID27 cytoplas 94.3 0.42 9.2E-06 32.1 6.8 56 21-78 590-646 (794)
322 PF08596 Lgl_C: Lethal giant l 94.2 0.76 1.7E-05 28.4 9.0 71 3-79 86-173 (395)
323 PF14783 BBS2_Mid: Ciliary BBS 94.2 0.35 7.5E-06 24.4 10.1 69 6-78 2-70 (111)
324 PRK04043 tolB translocation pr 94.2 0.78 1.7E-05 28.5 11.0 74 5-83 189-269 (419)
325 PF13360 PQQ_2: PQQ-like domai 94.1 0.54 1.2E-05 26.2 8.5 60 29-88 2-63 (238)
326 PF04053 Coatomer_WDAD: Coatom 94.1 0.73 1.6E-05 28.9 7.2 56 19-79 117-173 (443)
327 TIGR03075 PQQ_enz_alc_DH PQQ-d 93.9 0.9 2E-05 29.1 7.4 61 29-89 440-500 (527)
328 COG5170 CDC55 Serine/threonine 93.7 0.2 4.4E-06 30.0 4.1 74 2-81 171-254 (460)
329 PF11715 Nup160: Nucleoporin N 93.6 0.55 1.2E-05 30.0 6.2 27 19-46 230-256 (547)
330 PF07433 DUF1513: Protein of u 93.3 1 2.3E-05 26.9 8.4 39 4-46 217-255 (305)
331 COG0823 TolB Periplasmic compo 93.2 0.72 1.6E-05 28.8 6.1 72 7-83 241-318 (425)
332 PF13360 PQQ_2: PQQ-like domai 93.2 0.83 1.8E-05 25.4 7.8 67 19-87 36-102 (238)
333 KOG1832|consensus 93.2 0.28 6.1E-06 33.6 4.5 49 43-91 1094-1143(1516)
334 TIGR03300 assembly_YfgL outer 93.1 1.2 2.5E-05 27.0 8.7 65 20-86 66-130 (377)
335 KOG1645|consensus 92.9 0.21 4.5E-06 30.8 3.4 48 43-90 186-235 (463)
336 KOG2066|consensus 92.7 1.4 3.1E-05 29.7 7.0 55 19-76 83-143 (846)
337 PF07433 DUF1513: Protein of u 92.1 1.6 3.6E-05 26.1 9.9 80 5-88 6-95 (305)
338 KOG1275|consensus 92.0 2.5 5.4E-05 29.3 7.5 72 19-92 147-218 (1118)
339 KOG2066|consensus 91.9 0.44 9.5E-06 31.9 4.2 56 22-84 51-106 (846)
340 KOG2444|consensus 91.8 1.2 2.7E-05 25.5 5.3 72 19-91 70-144 (238)
341 PF12234 Rav1p_C: RAVE protein 91.6 2.7 5.9E-05 27.8 7.7 57 21-77 42-102 (631)
342 PF04762 IKI3: IKI3 family; I 91.5 3.4 7.3E-05 28.7 9.3 68 4-77 76-148 (928)
343 PF00930 DPPIV_N: Dipeptidyl p 91.4 1.9 4E-05 26.1 6.3 53 29-83 22-75 (353)
344 COG2706 3-carboxymuconate cycl 91.0 2.3 5E-05 25.9 8.8 72 7-82 92-178 (346)
345 KOG2114|consensus 90.7 1.6 3.6E-05 29.7 5.8 60 20-81 36-102 (933)
346 PF07569 Hira: TUP1-like enhan 90.5 1 2.2E-05 25.5 4.4 28 57-84 18-45 (219)
347 KOG3621|consensus 89.7 2 4.4E-05 28.6 5.5 63 19-82 45-109 (726)
348 PF14655 RAB3GAP2_N: Rab3 GTPa 89.6 2.3 4.9E-05 26.7 5.6 45 46-90 303-348 (415)
349 PF14583 Pectate_lyase22: Olig 89.2 3.8 8.2E-05 25.5 6.6 73 10-86 42-117 (386)
350 TIGR02276 beta_rpt_yvtn 40-res 88.9 0.89 1.9E-05 17.9 5.0 30 60-89 2-32 (42)
351 KOG2395|consensus 88.9 3 6.4E-05 27.2 5.7 57 20-79 442-500 (644)
352 PF04762 IKI3: IKI3 family; I 88.6 6.5 0.00014 27.4 8.3 59 5-68 211-275 (928)
353 PF10168 Nup88: Nuclear pore c 88.5 3.2 7E-05 27.9 6.0 34 4-39 147-180 (717)
354 KOG4499|consensus 87.9 3.8 8.3E-05 24.0 7.7 78 7-88 161-250 (310)
355 COG0823 TolB Periplasmic compo 87.4 5 0.00011 25.3 6.1 73 8-86 286-365 (425)
356 PF07569 Hira: TUP1-like enhan 87.0 4 8.6E-05 23.2 9.7 64 19-84 22-100 (219)
357 PF02897 Peptidase_S9_N: Proly 87.0 5.3 0.00011 24.6 10.1 71 6-82 126-213 (414)
358 smart00564 PQQ beta-propeller 86.1 1.2 2.7E-05 16.5 4.0 25 63-87 8-32 (33)
359 PF00930 DPPIV_N: Dipeptidyl p 85.7 3.6 7.7E-05 24.9 4.9 60 4-69 43-120 (353)
360 PRK11138 outer membrane biogen 85.3 6.6 0.00014 24.1 7.9 59 28-87 302-361 (394)
361 COG3204 Uncharacterized protei 85.0 6.4 0.00014 23.7 7.3 72 4-81 86-160 (316)
362 PF12768 Rax2: Cortical protei 83.9 6.9 0.00015 23.3 5.8 55 28-82 14-75 (281)
363 PRK02888 nitrous-oxide reducta 83.9 10 0.00023 25.3 6.4 53 29-82 295-354 (635)
364 COG3386 Gluconolactonase [Carb 83.3 7.7 0.00017 23.3 9.4 77 7-88 166-251 (307)
365 KOG1008|consensus 83.2 0.56 1.2E-05 30.8 0.8 74 5-81 58-139 (783)
366 cd00216 PQQ_DH Dehydrogenases 82.3 10 0.00023 24.2 7.5 66 22-88 64-137 (488)
367 PF01011 PQQ: PQQ enzyme repea 82.3 2.3 5.1E-05 16.7 4.5 26 64-89 3-28 (38)
368 KOG1008|consensus 82.0 1 2.2E-05 29.8 1.5 71 4-79 196-275 (783)
369 PRK11138 outer membrane biogen 82.0 9.5 0.00021 23.4 8.4 56 21-78 337-393 (394)
370 PF06977 SdiA-regulated: SdiA- 81.4 8.4 0.00018 22.5 9.6 70 5-79 23-94 (248)
371 PF15390 DUF4613: Domain of un 80.8 3.2 7E-05 27.3 3.4 32 3-38 155-186 (671)
372 KOG1920|consensus 80.2 14 0.00029 26.7 6.1 71 7-81 245-324 (1265)
373 PF03178 CPSF_A: CPSF A subuni 80.2 10 0.00022 22.6 8.7 68 3-79 88-157 (321)
374 PF07676 PD40: WD40-like Beta 78.9 3.2 7E-05 16.1 4.4 28 4-35 9-38 (39)
375 PF06433 Me-amine-dh_H: Methyl 78.2 13 0.00029 22.8 5.4 40 5-47 290-329 (342)
376 KOG4499|consensus 77.6 12 0.00026 22.1 5.9 40 19-59 223-263 (310)
377 PF08596 Lgl_C: Lethal giant l 77.3 15 0.00033 23.0 10.0 37 49-86 85-122 (395)
378 KOG2377|consensus 76.3 19 0.0004 23.5 7.6 34 47-80 63-97 (657)
379 COG3490 Uncharacterized protei 76.2 15 0.00032 22.4 5.5 55 10-68 120-180 (366)
380 KOG1920|consensus 75.5 29 0.00062 25.3 8.7 66 5-76 70-136 (1265)
381 KOG4649|consensus 75.4 15 0.00033 22.0 8.6 68 19-88 22-90 (354)
382 KOG3617|consensus 73.8 6.6 0.00014 27.4 3.4 32 2-38 100-131 (1416)
383 COG3204 Uncharacterized protei 73.6 18 0.00038 22.0 5.4 42 47-88 82-124 (316)
384 COG3391 Uncharacterized conser 73.6 19 0.00041 22.3 10.1 73 7-84 119-195 (381)
385 PF10168 Nup88: Nuclear pore c 73.1 27 0.00059 23.9 10.1 73 5-82 86-182 (717)
386 PF12657 TFIIIC_delta: Transcr 73.1 13 0.00028 20.2 4.4 34 4-38 86-121 (173)
387 PF08728 CRT10: CRT10; InterP 73.0 27 0.00059 23.9 7.1 70 4-78 164-245 (717)
388 PF15390 DUF4613: Domain of un 72.9 26 0.00056 23.6 9.0 34 4-38 57-90 (671)
389 cd00216 PQQ_DH Dehydrogenases 71.8 24 0.00051 22.7 7.3 60 29-88 365-433 (488)
390 PF13570 PQQ_3: PQQ-like domai 71.1 6 0.00013 15.5 3.3 21 60-80 20-40 (40)
391 KOG1897|consensus 69.6 39 0.00084 24.2 6.4 51 29-79 847-898 (1096)
392 COG5167 VID27 Protein involved 69.5 30 0.00064 23.0 5.4 59 19-79 573-632 (776)
393 PF14761 HPS3_N: Hermansky-Pud 69.4 19 0.00042 20.7 6.5 47 20-68 29-78 (215)
394 KOG4460|consensus 68.3 33 0.00071 22.9 7.2 75 5-84 105-203 (741)
395 PHA02713 hypothetical protein; 67.8 32 0.00069 22.6 6.0 59 31-90 481-544 (557)
396 KOG2114|consensus 67.8 40 0.00087 23.7 9.2 79 3-88 171-252 (933)
397 TIGR03074 PQQ_membr_DH membran 65.9 42 0.00091 23.3 7.0 61 29-89 413-487 (764)
398 PF06977 SdiA-regulated: SdiA- 64.9 26 0.00056 20.5 7.7 58 5-67 172-239 (248)
399 PF01731 Arylesterase: Arylest 64.3 15 0.00033 17.7 3.8 27 7-37 57-83 (86)
400 KOG2467|consensus 64.0 9.4 0.0002 24.0 2.5 22 60-81 340-361 (477)
401 KOG3630|consensus 63.9 7.9 0.00017 27.8 2.4 69 6-78 158-227 (1405)
402 PF12341 DUF3639: Protein of u 63.7 8.1 0.00018 14.3 3.3 25 4-35 2-26 (27)
403 PRK13616 lipoprotein LpqB; Pro 60.5 48 0.001 22.2 6.0 25 50-75 447-472 (591)
404 PRK10115 protease 2; Provision 58.8 55 0.0012 22.3 7.9 70 6-81 129-209 (686)
405 KOG1900|consensus 58.1 76 0.0016 23.6 7.6 33 48-80 240-273 (1311)
406 KOG1916|consensus 57.5 23 0.0005 25.2 3.6 69 11-84 243-328 (1283)
407 PF08450 SGL: SMP-30/Gluconola 55.7 37 0.00079 19.3 11.4 70 7-85 3-74 (246)
408 KOG2017|consensus 54.7 21 0.00045 22.4 2.8 31 62-92 182-215 (427)
409 PF05096 Glu_cyclase_2: Glutam 53.8 46 0.001 19.9 7.6 59 28-88 108-166 (264)
410 PF09081 DUF1921: Domain of un 47.6 25 0.00054 15.0 2.6 9 28-36 43-51 (51)
411 KOG3616|consensus 45.0 1.1E+02 0.0023 21.9 5.1 31 5-40 16-46 (1636)
412 KOG2280|consensus 44.9 1E+02 0.0022 21.7 4.9 47 31-79 65-112 (829)
413 PF12234 Rav1p_C: RAVE protein 44.7 1E+02 0.0022 21.1 8.7 72 3-79 72-156 (631)
414 PRK13616 lipoprotein LpqB; Pro 43.3 1E+02 0.0022 20.8 6.9 69 3-78 447-524 (591)
415 KOG1897|consensus 42.4 1.3E+02 0.0029 21.9 7.6 60 29-90 806-867 (1096)
416 TIGR03075 PQQ_enz_alc_DH PQQ-d 42.2 1E+02 0.0022 20.4 8.5 68 21-89 122-199 (527)
417 PF14727 PHTB1_N: PTHB1 N-term 42.0 93 0.002 20.0 8.6 71 8-79 133-204 (418)
418 PF14269 Arylsulfotran_2: Aryl 40.9 82 0.0018 19.0 7.4 30 19-49 155-184 (299)
419 KOG3616|consensus 40.9 54 0.0012 23.2 3.4 29 53-81 17-46 (1636)
420 PF14870 PSII_BNR: Photosynthe 40.6 85 0.0018 19.1 9.3 67 5-77 146-213 (302)
421 KOG1916|consensus 40.4 18 0.00039 25.7 1.2 58 21-79 196-265 (1283)
422 KOG2109|consensus 39.4 61 0.0013 22.3 3.3 46 32-77 297-344 (788)
423 PF04841 Vps16_N: Vps16, N-ter 39.3 1E+02 0.0022 19.6 10.3 38 4-46 217-254 (410)
424 PF08801 Nucleoporin_N: Nup133 38.4 1E+02 0.0022 19.4 4.9 30 52-81 191-221 (422)
425 PF00780 CNH: CNH domain; Int 38.0 82 0.0018 18.2 7.4 59 19-81 7-66 (275)
426 PF10214 Rrn6: RNA polymerase 35.8 1.5E+02 0.0033 20.6 8.5 74 5-83 147-236 (765)
427 PF08954 DUF1900: Domain of un 35.1 74 0.0016 16.8 3.8 32 6-41 13-44 (136)
428 KOG1983|consensus 35.1 1.8E+02 0.0039 21.2 5.9 26 58-83 243-268 (993)
429 COG3391 Uncharacterized conser 34.9 1.2E+02 0.0025 19.0 9.5 75 8-88 78-157 (381)
430 TIGR02604 Piru_Ver_Nterm putat 34.8 1.1E+02 0.0025 18.9 5.8 15 54-68 187-202 (367)
431 PF08553 VID27: VID27 cytoplas 34.7 1.7E+02 0.0036 20.8 7.3 62 19-81 493-562 (794)
432 PF09984 DUF2222: Uncharacteri 34.6 77 0.0017 17.1 2.8 22 50-71 50-73 (146)
433 KOG4305|consensus 32.9 1E+02 0.0022 22.4 3.7 28 21-50 964-991 (1029)
434 KOG2727|consensus 32.5 90 0.0019 22.6 3.4 75 8-87 326-414 (1244)
435 PF03022 MRJP: Major royal jel 32.4 1.2E+02 0.0025 18.2 10.0 61 30-90 34-107 (287)
436 PF14781 BBS2_N: Ciliary BBSom 29.5 99 0.0021 16.5 8.7 82 4-87 48-133 (136)
437 KOG3630|consensus 29.3 2.5E+02 0.0055 21.2 5.9 29 4-37 199-227 (1405)
438 TIGR03074 PQQ_membr_DH membran 29.2 2.1E+02 0.0045 20.2 8.8 66 21-87 196-286 (764)
439 PF13964 Kelch_6: Kelch motif 29.0 54 0.0012 13.3 2.7 22 19-40 12-38 (50)
440 PF03088 Str_synth: Strictosid 28.5 82 0.0018 15.3 5.0 38 28-66 35-73 (89)
441 PF01436 NHL: NHL repeat; Int 28.5 42 0.00092 12.0 4.0 8 29-36 12-19 (28)
442 COG1424 BioW Pimeloyl-CoA synt 27.3 1.3E+02 0.0029 17.3 3.2 34 1-38 166-201 (239)
443 PF15644 Tox-PL: Papain fold t 26.7 96 0.0021 15.5 2.7 22 61-82 88-109 (111)
444 PRK14751 tetracycline resistan 26.1 50 0.0011 12.0 1.1 10 69-78 13-22 (28)
445 PF05935 Arylsulfotrans: Aryls 25.9 2E+02 0.0042 18.8 5.5 39 52-90 272-312 (477)
446 cd01211 GAPCenA GAPCenA Phosph 23.2 1.3E+02 0.0028 15.8 2.9 19 28-46 49-67 (125)
447 PF10584 Proteasome_A_N: Prote 22.3 28 0.00061 12.3 -0.1 7 57-63 8-14 (23)
448 TIGR03054 photo_alph_chp1 puta 21.7 1.5E+02 0.0032 15.9 7.0 59 25-83 46-117 (135)
449 PF05694 SBP56: 56kDa selenium 21.6 2.5E+02 0.0054 18.5 5.9 49 29-77 221-275 (461)
450 COG4993 Gcd Glucose dehydrogen 21.3 3E+02 0.0065 19.3 5.0 58 27-84 650-723 (773)
451 PF07250 Glyoxal_oxid_N: Glyox 21.1 2E+02 0.0042 17.1 7.3 69 19-89 129-207 (243)
No 1
>KOG0272|consensus
Probab=99.83 E-value=3.6e-20 Score=106.95 Aligned_cols=85 Identities=33% Similarity=0.493 Sum_probs=80.0
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|...|.+++|+|+ ++.++++|. |..-++||++++.++-.+.+|..+|..+ |+|.|..++||+.|.++++||++.
T Consensus 302 Hs~~v~~iaf~~D----GSL~~tGGl-D~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~ 376 (459)
T KOG0272|consen 302 HSKGVFSIAFQPD----GSLAATGGL-DSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRM 376 (459)
T ss_pred cccccceeEecCC----CceeeccCc-cchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecc
Confidence 7789999999999 788888885 9999999999999999999999999999 999999999999999999999999
Q ss_pred CceeeEecCcc
Q psy14456 81 RGCTNVLTPIT 91 (93)
Q Consensus 81 ~~~~~~~~~~~ 91 (93)
..++..+.+|.
T Consensus 377 r~~ly~ipAH~ 387 (459)
T KOG0272|consen 377 RSELYTIPAHS 387 (459)
T ss_pred cccceeccccc
Confidence 99998888874
No 2
>KOG0271|consensus
Probab=99.82 E-value=8.4e-20 Score=104.86 Aligned_cols=85 Identities=29% Similarity=0.458 Sum_probs=76.9
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|.++|.|+.|+|+ +..+++++ .|.++++||+.+..+.+++++|.+.|.|+ |+|++..+++|+.|+.|++||.++
T Consensus 114 H~e~Vl~~~fsp~----g~~l~tGs-GD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpkt 188 (480)
T KOG0271|consen 114 HGEAVLSVQFSPT----GSRLVTGS-GDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKT 188 (480)
T ss_pred CCCcEEEEEecCC----CceEEecC-CCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCC
Confidence 7899999999998 77777765 69999999999999999999999999999 999999999999999999999998
Q ss_pred Cce-eeEecCcc
Q psy14456 81 RGC-TNVLTPIT 91 (93)
Q Consensus 81 ~~~-~~~~~~~~ 91 (93)
|++ .+.+.+|.
T Consensus 189 g~~~g~~l~gH~ 200 (480)
T KOG0271|consen 189 GQQIGRALRGHK 200 (480)
T ss_pred CCcccccccCcc
Confidence 865 56666664
No 3
>KOG0263|consensus
Probab=99.80 E-value=1.9e-19 Score=109.55 Aligned_cols=85 Identities=28% Similarity=0.469 Sum_probs=77.7
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|.+-|.|+.|+|+ ..++++++ .|.++++||+.+|..+..|.||+++|.++ |+|.|.++++|+.|+.|++||+.+
T Consensus 534 hlsDV~cv~FHPN----s~Y~aTGS-sD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~ 608 (707)
T KOG0263|consen 534 HLSDVDCVSFHPN----SNYVATGS-SDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLAN 608 (707)
T ss_pred cccccceEEECCc----ccccccCC-CCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCC
Confidence 6678999999998 67777765 59999999999999999999999999999 999999999999999999999999
Q ss_pred CceeeEecCcc
Q psy14456 81 RGCTNVLTPIT 91 (93)
Q Consensus 81 ~~~~~~~~~~~ 91 (93)
+..+..+.+|+
T Consensus 609 ~~~v~~l~~Ht 619 (707)
T KOG0263|consen 609 GSLVKQLKGHT 619 (707)
T ss_pred Ccchhhhhccc
Confidence 98888877763
No 4
>KOG0295|consensus
Probab=99.80 E-value=1.7e-18 Score=98.78 Aligned_cols=90 Identities=28% Similarity=0.526 Sum_probs=79.0
Q ss_pred CccceeEEEEEecCCC----------CcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCC
Q psy14456 2 HDGTVRDVCFIEDTSN----------KSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHD 70 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~----------~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~ 70 (93)
|+-+|.|++|.|.... .+-.++.++++|++|++||+.++.++.++.+|.+.|..+ |+|.|++++++..|
T Consensus 276 hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDD 355 (406)
T KOG0295|consen 276 HEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADD 355 (406)
T ss_pred cccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecC
Confidence 7788999999986421 112456667899999999999999999999999999999 99999999999999
Q ss_pred CcEEEEeCCCCceeeEecCcc
Q psy14456 71 RTVRFWDLRTRGCTNVLTPIT 91 (93)
Q Consensus 71 ~~i~~~d~~~~~~~~~~~~~~ 91 (93)
+++++||+++++|...+.+|+
T Consensus 356 ktlrvwdl~~~~cmk~~~ah~ 376 (406)
T KOG0295|consen 356 KTLRVWDLKNLQCMKTLEAHE 376 (406)
T ss_pred CcEEEEEeccceeeeccCCCc
Confidence 999999999999999888764
No 5
>KOG0266|consensus
Probab=99.78 E-value=7.2e-18 Score=101.07 Aligned_cols=86 Identities=38% Similarity=0.599 Sum_probs=78.1
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeC-CCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDC-ATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
|...|.+++|+|+ ++.+++++ .|+++++||+ ..+..++.+.+|...++++ |+++++.+++|+.|+++++||++
T Consensus 202 h~~~v~~~~fs~d----~~~l~s~s-~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~ 276 (456)
T KOG0266|consen 202 HTRGVSDVAFSPD----GSYLLSGS-DDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVR 276 (456)
T ss_pred cccceeeeEECCC----CcEEEEec-CCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEecc
Confidence 7788999999999 67777766 6999999999 5558889999999999999 99999999999999999999999
Q ss_pred CCceeeEecCccC
Q psy14456 80 TRGCTNVLTPITV 92 (93)
Q Consensus 80 ~~~~~~~~~~~~~ 92 (93)
++++.+.+..|..
T Consensus 277 ~~~~~~~l~~hs~ 289 (456)
T KOG0266|consen 277 TGECVRKLKGHSD 289 (456)
T ss_pred CCeEEEeeeccCC
Confidence 9999999988864
No 6
>PTZ00421 coronin; Provisional
Probab=99.77 E-value=3.1e-17 Score=98.94 Aligned_cols=86 Identities=26% Similarity=0.373 Sum_probs=75.7
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|+..|.+++|+|.+ ...+++++ .|+.|++||++++..+..+.+|...+.++ |++++.++++++.|+.+++||+++
T Consensus 124 H~~~V~~l~f~P~~---~~iLaSgs-~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rs 199 (493)
T PTZ00421 124 HTKKVGIVSFHPSA---MNVLASAG-ADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRD 199 (493)
T ss_pred CCCcEEEEEeCcCC---CCEEEEEe-CCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCC
Confidence 78899999999973 35666666 69999999999999888899999999999 999999999999999999999999
Q ss_pred CceeeEecCcc
Q psy14456 81 RGCTNVLTPIT 91 (93)
Q Consensus 81 ~~~~~~~~~~~ 91 (93)
+..+..+..|.
T Consensus 200 g~~v~tl~~H~ 210 (493)
T PTZ00421 200 GTIVSSVEAHA 210 (493)
T ss_pred CcEEEEEecCC
Confidence 98887776553
No 7
>KOG0266|consensus
Probab=99.76 E-value=3.1e-17 Score=98.39 Aligned_cols=84 Identities=36% Similarity=0.608 Sum_probs=75.1
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|+..|++++|+|. ++++++++ .|+.|++||++++.+...+.+|...+.++ |++++.++++++.|+.+++||+.+
T Consensus 245 H~~~v~~~~f~p~----g~~i~Sgs-~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~ 319 (456)
T KOG0266|consen 245 HSTYVTSVAFSPD----GNLLVSGS-DDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLET 319 (456)
T ss_pred CCCceEEEEecCC----CCEEEEec-CCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCC
Confidence 8899999999999 76666655 69999999999999999999999999999 999999999999999999999999
Q ss_pred Cc--eeeEecCc
Q psy14456 81 RG--CTNVLTPI 90 (93)
Q Consensus 81 ~~--~~~~~~~~ 90 (93)
+. +...+..+
T Consensus 320 ~~~~~~~~~~~~ 331 (456)
T KOG0266|consen 320 GSKLCLKLLSGA 331 (456)
T ss_pred CceeeeecccCC
Confidence 98 55555544
No 8
>KOG0279|consensus
Probab=99.75 E-value=1.9e-17 Score=91.86 Aligned_cols=85 Identities=26% Similarity=0.280 Sum_probs=74.2
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|++.|.|+.|+|.. .+.++.+++.|+++++||++.-+....+.+|++.++.+ ++|||.++++|+.|+.+.+||++.
T Consensus 147 ~~~WVscvrfsP~~---~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~ 223 (315)
T KOG0279|consen 147 HREWVSCVRFSPNE---SNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNE 223 (315)
T ss_pred CcCcEEEEEEcCCC---CCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccC
Confidence 46789999999985 34444444579999999999999899999999999999 999999999999999999999999
Q ss_pred CceeeEecC
Q psy14456 81 RGCTNVLTP 89 (93)
Q Consensus 81 ~~~~~~~~~ 89 (93)
+++++.+..
T Consensus 224 ~k~lysl~a 232 (315)
T KOG0279|consen 224 GKNLYSLEA 232 (315)
T ss_pred CceeEeccC
Confidence 998887754
No 9
>KOG0271|consensus
Probab=99.75 E-value=1e-17 Score=96.44 Aligned_cols=87 Identities=31% Similarity=0.429 Sum_probs=77.4
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCcee-EEeeccccceEEE-Eec-----CCCEEEEecCCCcEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAF-QALSGHSGHVLSL-YNW-----GGATVLSGSHDRTVR 74 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~v~~~-~~~-----~~~~~~s~~~~~~i~ 74 (93)
|...|.|++|+|+ ++.+++++ .||.|++||..+++++ ..+.+|+..|+++ |.| ....+++++.|+.++
T Consensus 156 H~~WVlcvawsPD----gk~iASG~-~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vr 230 (480)
T KOG0271|consen 156 HKNWVLCVAWSPD----GKKIASGS-KDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVR 230 (480)
T ss_pred CccEEEEEEECCC----cchhhccc-cCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEE
Confidence 7789999999999 78877765 7999999999999775 5788999999999 877 256899999999999
Q ss_pred EEeCCCCceeeEecCccCC
Q psy14456 75 FWDLRTRGCTNVLTPITVP 93 (93)
Q Consensus 75 ~~d~~~~~~~~~~~~~~~~ 93 (93)
+||+..+.+++.+.+|+.|
T Consensus 231 IWd~~~~~~~~~lsgHT~~ 249 (480)
T KOG0271|consen 231 IWDTKLGTCVRTLSGHTAS 249 (480)
T ss_pred EEEccCceEEEEeccCccc
Confidence 9999999999999999865
No 10
>KOG0286|consensus
Probab=99.75 E-value=2.3e-17 Score=92.19 Aligned_cols=84 Identities=29% Similarity=0.466 Sum_probs=77.7
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|++-|.+++++|.. .+.++++++ |+..++||++.+.+++.|.+|.+.|+.+ |.|+|.-+++|+.|++.++||+|.
T Consensus 185 H~gDV~slsl~p~~---~ntFvSg~c-D~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRa 260 (343)
T KOG0286|consen 185 HTGDVMSLSLSPSD---GNTFVSGGC-DKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRA 260 (343)
T ss_pred CcccEEEEecCCCC---CCeEEeccc-ccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecC
Confidence 78999999999942 788898885 9999999999999999999999999999 999999999999999999999999
Q ss_pred CceeeEecC
Q psy14456 81 RGCTNVLTP 89 (93)
Q Consensus 81 ~~~~~~~~~ 89 (93)
.+.+..|..
T Consensus 261 D~~~a~ys~ 269 (343)
T KOG0286|consen 261 DQELAVYSH 269 (343)
T ss_pred CcEEeeecc
Confidence 988887753
No 11
>KOG0286|consensus
Probab=99.73 E-value=7.5e-17 Score=90.18 Aligned_cols=85 Identities=32% Similarity=0.620 Sum_probs=77.2
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-Eec-CCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d~~ 79 (93)
|++.+.|+.|.++ ++. +++. .|.+..+||+++++....+.+|.+.|.++ ++| +++.+++|+.|+..++||+|
T Consensus 144 HtgylScC~f~dD----~~i-lT~S-GD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R 217 (343)
T KOG0286|consen 144 HTGYLSCCRFLDD----NHI-LTGS-GDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVR 217 (343)
T ss_pred ccceeEEEEEcCC----Cce-EecC-CCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeecc
Confidence 8899999999987 554 4433 49999999999999999999999999999 999 89999999999999999999
Q ss_pred CCceeeEecCccC
Q psy14456 80 TRGCTNVLTPITV 92 (93)
Q Consensus 80 ~~~~~~~~~~~~~ 92 (93)
.+.+.++|.+|+.
T Consensus 218 ~~~c~qtF~ghes 230 (343)
T KOG0286|consen 218 SGQCVQTFEGHES 230 (343)
T ss_pred CcceeEeeccccc
Confidence 9999999999863
No 12
>KOG0285|consensus
Probab=99.73 E-value=7.3e-17 Score=92.44 Aligned_cols=84 Identities=36% Similarity=0.468 Sum_probs=75.7
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|-+.|+|++.+|. -+.++++| +|..+++||+++...+..+.+|.++|..+ +.+-...+++|++|++|++||++.
T Consensus 234 HlS~V~~L~lhPT----ldvl~t~g-rDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~a 308 (460)
T KOG0285|consen 234 HLSGVYCLDLHPT----LDVLVTGG-RDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRA 308 (460)
T ss_pred ccceeEEEecccc----ceeEEecC-CcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeecc
Confidence 6688999999998 78888887 79999999999999999999999999999 888667799999999999999999
Q ss_pred CceeeEecCc
Q psy14456 81 RGCTNVLTPI 90 (93)
Q Consensus 81 ~~~~~~~~~~ 90 (93)
|+....+..|
T Consensus 309 gkt~~tlt~h 318 (460)
T KOG0285|consen 309 GKTMITLTHH 318 (460)
T ss_pred CceeEeeecc
Confidence 9877777655
No 13
>KOG0272|consensus
Probab=99.72 E-value=2.9e-17 Score=95.14 Aligned_cols=85 Identities=25% Similarity=0.308 Sum_probs=78.0
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-Eec-CCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d~~ 79 (93)
|...|..++|+|+ +-.+++++ .|++++|||++..+++..+.+|.+.|..+ |.| .|.+++|++.|.++++|..+
T Consensus 344 H~k~I~~V~fsPN----Gy~lATgs-~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~ 418 (459)
T KOG0272|consen 344 HIKEILSVAFSPN----GYHLATGS-SDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTR 418 (459)
T ss_pred cccceeeEeECCC----ceEEeecC-CCCcEEEeeecccccceecccccchhhheEecccCCeEEEEcccCcceeeecCC
Confidence 7889999999998 66667766 69999999999999999999999999999 998 78999999999999999999
Q ss_pred CCceeeEecCcc
Q psy14456 80 TRGCTNVLTPIT 91 (93)
Q Consensus 80 ~~~~~~~~~~~~ 91 (93)
+.++++++.+|+
T Consensus 419 ~~~~~ksLaGHe 430 (459)
T KOG0272|consen 419 TWSPLKSLAGHE 430 (459)
T ss_pred CcccchhhcCCc
Confidence 999999998875
No 14
>PTZ00421 coronin; Provisional
Probab=99.71 E-value=6.2e-16 Score=93.40 Aligned_cols=86 Identities=20% Similarity=0.286 Sum_probs=72.2
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC-------ceeEEeeccccceEEE-EecCC-CEEEEecCCCc
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG-------QAFQALSGHSGHVLSL-YNWGG-ATVLSGSHDRT 72 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~-------~~~~~~~~~~~~v~~~-~~~~~-~~~~s~~~~~~ 72 (93)
|++.|.+++|+|.. ++.+++++ .|+.|++|++.++ ..+..+.+|...|.++ |+|.+ ..+++++.|+.
T Consensus 74 H~~~V~~v~fsP~d---~~~LaSgS-~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dgt 149 (493)
T PTZ00421 74 QEGPIIDVAFNPFD---PQKLFTAS-EDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMV 149 (493)
T ss_pred CCCCEEEEEEcCCC---CCEEEEEe-CCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCE
Confidence 78999999999931 56677766 6999999998764 3466788999999999 99964 78999999999
Q ss_pred EEEEeCCCCceeeEecCcc
Q psy14456 73 VRFWDLRTRGCTNVLTPIT 91 (93)
Q Consensus 73 i~~~d~~~~~~~~~~~~~~ 91 (93)
+++||++++.....+..|.
T Consensus 150 VrIWDl~tg~~~~~l~~h~ 168 (493)
T PTZ00421 150 VNVWDVERGKAVEVIKCHS 168 (493)
T ss_pred EEEEECCCCeEEEEEcCCC
Confidence 9999999998888877654
No 15
>KOG0284|consensus
Probab=99.71 E-value=1.1e-17 Score=96.72 Aligned_cols=85 Identities=27% Similarity=0.402 Sum_probs=76.4
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|.--|.+++|+|. ..+++++| +|..|++||.++++++.++.+|++.|..+ |.+++++|++++.|..++++|+++
T Consensus 221 HgwdVksvdWHP~----kgLiasgs-kDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~ 295 (464)
T KOG0284|consen 221 HGWDVKSVDWHPT----KGLIASGS-KDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRT 295 (464)
T ss_pred CCCCcceeccCCc----cceeEEcc-CCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhH
Confidence 5567999999997 66666655 79999999999999999999999999999 999999999999999999999998
Q ss_pred CceeeEecCcc
Q psy14456 81 RGCTNVLTPIT 91 (93)
Q Consensus 81 ~~~~~~~~~~~ 91 (93)
-+.++.+++|.
T Consensus 296 mkEl~~~r~Hk 306 (464)
T KOG0284|consen 296 MKELFTYRGHK 306 (464)
T ss_pred hHHHHHhhcch
Confidence 88888888764
No 16
>PTZ00420 coronin; Provisional
Probab=99.71 E-value=6.9e-16 Score=94.20 Aligned_cols=85 Identities=11% Similarity=0.110 Sum_probs=71.9
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|+..|.+++|+|+ +..++++++.|+.|++||+++++.+..+. +...+.++ |++++.++++++.|+.+++||+++
T Consensus 124 H~~~V~sVaf~P~----g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rs 198 (568)
T PTZ00420 124 HKKKISIIDWNPM----NYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRK 198 (568)
T ss_pred CCCcEEEEEECCC----CCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCC
Confidence 7789999999998 55554444469999999999988777665 56788999 999999999999999999999999
Q ss_pred CceeeEecCcc
Q psy14456 81 RGCTNVLTPIT 91 (93)
Q Consensus 81 ~~~~~~~~~~~ 91 (93)
+..+..+..|.
T Consensus 199 g~~i~tl~gH~ 209 (568)
T PTZ00420 199 QEIASSFHIHD 209 (568)
T ss_pred CcEEEEEeccc
Confidence 98888887664
No 17
>KOG0316|consensus
Probab=99.70 E-value=1.8e-16 Score=86.73 Aligned_cols=85 Identities=22% Similarity=0.343 Sum_probs=80.3
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|+++|..+.|..+ +++.+++|+ |.++++|+...+.++++..+|..+|... .+.++..+++|+.|+.+.+||+.+
T Consensus 16 ~qgaV~avryN~d----GnY~ltcGs-drtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~T 90 (307)
T KOG0316|consen 16 AQGAVRAVRYNVD----GNYCLTCGS-DRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNT 90 (307)
T ss_pred cccceEEEEEccC----CCEEEEcCC-CceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEccc
Confidence 5789999999998 899999996 9999999999999999999999999999 888999999999999999999999
Q ss_pred CceeeEecCcc
Q psy14456 81 RGCTNVLTPIT 91 (93)
Q Consensus 81 ~~~~~~~~~~~ 91 (93)
|+..+.|++|.
T Consensus 91 Gkv~Rr~rgH~ 101 (307)
T KOG0316|consen 91 GKVDRRFRGHL 101 (307)
T ss_pred Ceeeeeccccc
Confidence 99999999884
No 18
>KOG0319|consensus
Probab=99.70 E-value=1.5e-16 Score=97.15 Aligned_cols=87 Identities=24% Similarity=0.379 Sum_probs=78.9
Q ss_pred CCccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
.|...|+|++++|+ .++ ++.|++|.+.++|+++....+..+.+|+-.+.++ |++..+.++|++.|.++++|.+.
T Consensus 461 aHdKdIN~Vaia~n----dkL-iAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is 535 (775)
T KOG0319|consen 461 AHDKDINCVAIAPN----DKL-IATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSIS 535 (775)
T ss_pred hhcccccceEecCC----Cce-EEecccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEec
Confidence 37889999999997 455 4455689999999999888899999999999999 99999999999999999999999
Q ss_pred CCceeeEecCccC
Q psy14456 80 TRGCTNVLTPITV 92 (93)
Q Consensus 80 ~~~~~~~~~~~~~ 92 (93)
+..|+++|.+|+.
T Consensus 536 ~fSClkT~eGH~~ 548 (775)
T KOG0319|consen 536 TFSCLKTFEGHTS 548 (775)
T ss_pred cceeeeeecCccc
Confidence 9999999999864
No 19
>KOG0285|consensus
Probab=99.70 E-value=8.8e-17 Score=92.10 Aligned_cols=85 Identities=27% Similarity=0.322 Sum_probs=78.0
Q ss_pred CCccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
.|.+.|.|+++.|. +.++++++ .|+++.|||+.+++...++.+|.+.+..+ ++....++++++.|+++++||++
T Consensus 149 gHlgWVr~vavdP~----n~wf~tgs-~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe 223 (460)
T KOG0285|consen 149 GHLGWVRSVAVDPG----NEWFATGS-ADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLE 223 (460)
T ss_pred hccceEEEEeeCCC----ceeEEecC-CCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEech
Confidence 38899999999997 67777766 69999999999999999999999999999 99999999999999999999999
Q ss_pred CCceeeEecCc
Q psy14456 80 TRGCTNVLTPI 90 (93)
Q Consensus 80 ~~~~~~~~~~~ 90 (93)
..+.++.+.+|
T Consensus 224 ~nkvIR~YhGH 234 (460)
T KOG0285|consen 224 YNKVIRHYHGH 234 (460)
T ss_pred hhhhHHHhccc
Confidence 99888888776
No 20
>KOG0291|consensus
Probab=99.70 E-value=4.1e-16 Score=95.78 Aligned_cols=83 Identities=28% Similarity=0.484 Sum_probs=77.7
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|..++++++++|+ ++.+++++ +|+.|++||..++-|..++..|++.+..+ |...++.+++.+.||+++.||+..
T Consensus 349 H~~~i~~l~YSpD----gq~iaTG~-eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkR 423 (893)
T KOG0291|consen 349 HSDRITSLAYSPD----GQLIATGA-EDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKR 423 (893)
T ss_pred cccceeeEEECCC----CcEEEecc-CCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecc
Confidence 6788999999999 88888877 69999999999999999999999999999 999999999999999999999999
Q ss_pred CceeeEecC
Q psy14456 81 RGCTNVLTP 89 (93)
Q Consensus 81 ~~~~~~~~~ 89 (93)
..+.++|..
T Consensus 424 YrNfRTft~ 432 (893)
T KOG0291|consen 424 YRNFRTFTS 432 (893)
T ss_pred cceeeeecC
Confidence 988888864
No 21
>KOG0319|consensus
Probab=99.69 E-value=2e-16 Score=96.60 Aligned_cols=85 Identities=24% Similarity=0.457 Sum_probs=78.6
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|+..|.|+.|+|. .+.++++. .|++|++|.+.+.+|++++.||+..|... |-.++..+++++.||.+++|++.+
T Consensus 504 H~RGvw~V~Fs~~----dq~laT~S-gD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt 578 (775)
T KOG0319|consen 504 HTRGVWCVSFSKN----DQLLATCS-GDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKT 578 (775)
T ss_pred CccceEEEEeccc----cceeEecc-CCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccc
Confidence 8889999999997 67777765 59999999999999999999999999988 998999999999999999999999
Q ss_pred CceeeEecCcc
Q psy14456 81 RGCTNVLTPIT 91 (93)
Q Consensus 81 ~~~~~~~~~~~ 91 (93)
+.|.+++..|+
T Consensus 579 ~eC~~tlD~H~ 589 (775)
T KOG0319|consen 579 NECEMTLDAHN 589 (775)
T ss_pred hhhhhhhhhcc
Confidence 99999998875
No 22
>KOG0263|consensus
Probab=99.69 E-value=1.3e-16 Score=97.46 Aligned_cols=87 Identities=25% Similarity=0.383 Sum_probs=80.6
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|..+|.++.|+|- +-++++++ .|++-++|..+...++..+.+|-+.+.|+ |+|+..++++|+.|+++++||+.+
T Consensus 492 H~~PVwdV~F~P~----GyYFatas-~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~ 566 (707)
T KOG0263|consen 492 HLAPVWDVQFAPR----GYYFATAS-HDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVST 566 (707)
T ss_pred CCcceeeEEecCC----ceEEEecC-CCceeeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCC
Confidence 7789999999997 67777765 79999999999999999999999999999 999999999999999999999999
Q ss_pred CceeeEecCccCC
Q psy14456 81 RGCTNVLTPITVP 93 (93)
Q Consensus 81 ~~~~~~~~~~~~~ 93 (93)
|...+.|.+|..|
T Consensus 567 G~~VRiF~GH~~~ 579 (707)
T KOG0263|consen 567 GNSVRIFTGHKGP 579 (707)
T ss_pred CcEEEEecCCCCc
Confidence 9999999999764
No 23
>KOG0302|consensus
Probab=99.69 E-value=1.7e-16 Score=91.22 Aligned_cols=87 Identities=24% Similarity=0.372 Sum_probs=70.6
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC---ceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEe
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG---QAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~---~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d 77 (93)
|+..|..++|+|.+ ...|++++ .|++|+|||++.+ .++.. +.|.+.|+.+ |+-...+|++|+.||.+.+||
T Consensus 256 H~~SVEDLqWSptE---~~vfaScS-~DgsIrIWDiRs~~~~~~~~~-kAh~sDVNVISWnr~~~lLasG~DdGt~~iwD 330 (440)
T KOG0302|consen 256 HTKSVEDLQWSPTE---DGVFASCS-CDGSIRIWDIRSGPKKAAVST-KAHNSDVNVISWNRREPLLASGGDDGTLSIWD 330 (440)
T ss_pred cccchhhhccCCcc---CceEEeee-cCceEEEEEecCCCccceeEe-eccCCceeeEEccCCcceeeecCCCceEEEEE
Confidence 88999999999984 44555555 6999999999987 33443 7899999999 998777999999999999999
Q ss_pred CCC---CceeeEecCccCC
Q psy14456 78 LRT---RGCTNVLTPITVP 93 (93)
Q Consensus 78 ~~~---~~~~~~~~~~~~~ 93 (93)
+|+ ++++..|..|..|
T Consensus 331 LR~~~~~~pVA~fk~Hk~p 349 (440)
T KOG0302|consen 331 LRQFKSGQPVATFKYHKAP 349 (440)
T ss_pred hhhccCCCcceeEEeccCC
Confidence 995 4567777766654
No 24
>KOG0284|consensus
Probab=99.68 E-value=5.6e-17 Score=93.80 Aligned_cols=85 Identities=27% Similarity=0.434 Sum_probs=76.2
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|...|.+++|+|. .++|+++. .|+.|+|||....+....+.+|...+.++ |+|...++++++.|..|++||.++
T Consensus 179 h~eaIRdlafSpn----DskF~t~S-dDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprS 253 (464)
T KOG0284|consen 179 HAEAIRDLAFSPN----DSKFLTCS-DDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRS 253 (464)
T ss_pred hhhhhheeccCCC----CceeEEec-CCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCC
Confidence 4588999999997 67888876 69999999998887777789999999999 999999999999999999999999
Q ss_pred CceeeEecCcc
Q psy14456 81 RGCTNVLTPIT 91 (93)
Q Consensus 81 ~~~~~~~~~~~ 91 (93)
++|+.++..|.
T Consensus 254 g~cl~tlh~HK 264 (464)
T KOG0284|consen 254 GSCLATLHGHK 264 (464)
T ss_pred cchhhhhhhcc
Confidence 99988877663
No 25
>KOG0265|consensus
Probab=99.68 E-value=7.9e-16 Score=86.29 Aligned_cols=85 Identities=34% Similarity=0.459 Sum_probs=76.0
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC-ceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG-QAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~-~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
|++.|+.+.|+|+ +..++++|. |..|.+|+.... +....+++|.+.|..+ |..+++.+++++.|..+..||.+
T Consensus 46 h~geI~~~~F~P~----gs~~aSgG~-Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~ 120 (338)
T KOG0265|consen 46 HKGEIYTIKFHPD----GSCFASGGS-DRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAE 120 (338)
T ss_pred CcceEEEEEECCC----CCeEeecCC-cceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecc
Confidence 7899999999998 889999995 999999996433 3355778999999999 99999999999999999999999
Q ss_pred CCceeeEecCcc
Q psy14456 80 TRGCTNVLTPIT 91 (93)
Q Consensus 80 ~~~~~~~~~~~~ 91 (93)
+|++.+.+..|.
T Consensus 121 tG~~~rk~k~h~ 132 (338)
T KOG0265|consen 121 TGKRIRKHKGHT 132 (338)
T ss_pred cceeeehhcccc
Confidence 999999988774
No 26
>KOG0282|consensus
Probab=99.68 E-value=4.6e-17 Score=95.49 Aligned_cols=86 Identities=24% Similarity=0.386 Sum_probs=78.0
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC-CceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT-GQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
|+..|+++.|.|.. +.+++++| .|+.|.+|++.. +.++.++.+|..+|..+ |+.++..+++++.|+.+++||.+
T Consensus 213 H~kgvsai~~fp~~---~hLlLS~g-mD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtE 288 (503)
T KOG0282|consen 213 HTKGVSAIQWFPKK---GHLLLSGG-MDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTE 288 (503)
T ss_pred Cccccchhhhccce---eeEEEecC-CCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccc
Confidence 78899999999953 77888887 599999999876 78999999999999999 99999999999999999999999
Q ss_pred CCceeeEecCcc
Q psy14456 80 TRGCTNVLTPIT 91 (93)
Q Consensus 80 ~~~~~~~~~~~~ 91 (93)
+|+++..|....
T Consensus 289 TG~~~~~f~~~~ 300 (503)
T KOG0282|consen 289 TGQVLSRFHLDK 300 (503)
T ss_pred cceEEEEEecCC
Confidence 999999887643
No 27
>KOG0292|consensus
Probab=99.68 E-value=3.6e-16 Score=97.65 Aligned_cols=85 Identities=38% Similarity=0.593 Sum_probs=80.4
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|.++|..++|+|. +.+++++| .|..|++|+....+++.++.+|-..|..+ |++.-.++++++.|.+|++|+.++
T Consensus 50 HdGpVRgv~FH~~----qplFVSGG-DDykIkVWnYk~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqs 124 (1202)
T KOG0292|consen 50 HDGPVRGVDFHPT----QPLFVSGG-DDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQS 124 (1202)
T ss_pred cCCccceeeecCC----CCeEEecC-CccEEEEEecccceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccC
Confidence 7899999999998 78888888 59999999999999999999999999999 999999999999999999999999
Q ss_pred CceeeEecCcc
Q psy14456 81 RGCTNVLTPIT 91 (93)
Q Consensus 81 ~~~~~~~~~~~ 91 (93)
+.++..+++|.
T Consensus 125 r~~iavltGHn 135 (1202)
T KOG0292|consen 125 RKCIAVLTGHN 135 (1202)
T ss_pred CceEEEEecCc
Confidence 99999999874
No 28
>KOG0273|consensus
Probab=99.68 E-value=1.2e-15 Score=89.72 Aligned_cols=87 Identities=21% Similarity=0.289 Sum_probs=76.8
Q ss_pred CccceeEEEEEecCCC-----CcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEE
Q psy14456 2 HDGTVRDVCFIEDTSN-----KSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~-----~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~ 75 (93)
|+..|+.+.|+|.+.. .+..+++++ .|++|++||+..+.+++.|..|..+|+++ |+|++.++++|+.|+.+++
T Consensus 400 Hskei~t~~wsp~g~v~~n~~~~~~l~sas-~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~i 478 (524)
T KOG0273|consen 400 HSKEIYTIKWSPTGPVTSNPNMNLMLASAS-FDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHI 478 (524)
T ss_pred hccceeeEeecCCCCccCCCcCCceEEEee-cCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEe
Confidence 7889999999998522 345667776 59999999999999999999999999999 9999999999999999999
Q ss_pred EeCCCCceeeEecC
Q psy14456 76 WDLRTRGCTNVLTP 89 (93)
Q Consensus 76 ~d~~~~~~~~~~~~ 89 (93)
|+.++++..+.+..
T Consensus 479 ws~~~~~l~~s~~~ 492 (524)
T KOG0273|consen 479 WSTKTGKLVKSYQG 492 (524)
T ss_pred ccccchheeEeecC
Confidence 99999988777654
No 29
>KOG0318|consensus
Probab=99.67 E-value=1.5e-15 Score=90.29 Aligned_cols=83 Identities=29% Similarity=0.496 Sum_probs=77.3
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEee---ccccceEEE-EecCCCEEEEecCCCcEEEEe
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALS---GHSGHVLSL-YNWGGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~---~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d 77 (93)
|..-|.|+.|+|+ ++++++.|+ |+.+.+||-.+++.+..+. +|++.|..+ |+||+..++|++.|.++++||
T Consensus 189 HskFV~~VRysPD----G~~Fat~gs-Dgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWd 263 (603)
T KOG0318|consen 189 HSKFVNCVRYSPD----GSRFATAGS-DGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWD 263 (603)
T ss_pred cccceeeEEECCC----CCeEEEecC-CccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEE
Confidence 7788999999999 899999996 9999999999999888886 899999999 999999999999999999999
Q ss_pred CCCCceeeEecC
Q psy14456 78 LRTRGCTNVLTP 89 (93)
Q Consensus 78 ~~~~~~~~~~~~ 89 (93)
+.+.++.+++..
T Consensus 264 Vs~~slv~t~~~ 275 (603)
T KOG0318|consen 264 VSTNSLVSTWPM 275 (603)
T ss_pred eeccceEEEeec
Confidence 999998888754
No 30
>KOG0315|consensus
Probab=99.67 E-value=1.9e-15 Score=83.22 Aligned_cols=86 Identities=20% Similarity=0.292 Sum_probs=77.6
Q ss_pred CCccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC-ceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeC
Q psy14456 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG-QAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~-~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~ 78 (93)
+|++.+..+.++|+ .++++++++ |.++++|+.+.. +....+.+|...+... |+.++.+++|++.|...++||+
T Consensus 213 ah~~~il~C~lSPd----~k~lat~ss-dktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~ 287 (311)
T KOG0315|consen 213 AHNGHILRCLLSPD----VKYLATCSS-DKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDL 287 (311)
T ss_pred cccceEEEEEECCC----CcEEEeecC-CceEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeeccc
Confidence 58899999999999 899999885 999999999887 5556778999999988 9999999999999999999999
Q ss_pred CCCceeeEecCcc
Q psy14456 79 RTRGCTNVLTPIT 91 (93)
Q Consensus 79 ~~~~~~~~~~~~~ 91 (93)
+.++..+.+.+|-
T Consensus 288 ~~~k~v~qy~gh~ 300 (311)
T KOG0315|consen 288 SAGKEVRQYQGHH 300 (311)
T ss_pred ccCceeeecCCcc
Confidence 9999999888764
No 31
>KOG0265|consensus
Probab=99.65 E-value=1.5e-15 Score=85.18 Aligned_cols=83 Identities=31% Similarity=0.486 Sum_probs=72.2
Q ss_pred CCccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-Eec-CCCEEEEecCCCcEEEEeC
Q psy14456 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d~ 78 (93)
.|.++|..+.|.++ ++.++++|. |.+++.||+++|++.+.+++|..-++.+ -.- ...++.+++.|+++++||+
T Consensus 88 gHsgAVM~l~~~~d----~s~i~S~gt-Dk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~ 162 (338)
T KOG0265|consen 88 GHSGAVMELHGMRD----GSHILSCGT-DKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDI 162 (338)
T ss_pred cccceeEeeeeccC----CCEEEEecC-CceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEee
Confidence 38999999999999 788999985 9999999999999999999999988887 333 3467779999999999999
Q ss_pred CCCceeeEec
Q psy14456 79 RTRGCTNVLT 88 (93)
Q Consensus 79 ~~~~~~~~~~ 88 (93)
|+..+++.+.
T Consensus 163 R~k~~~~t~~ 172 (338)
T KOG0265|consen 163 RKKEAIKTFE 172 (338)
T ss_pred cccchhhccc
Confidence 9887777663
No 32
>KOG0273|consensus
Probab=99.62 E-value=6.8e-15 Score=86.56 Aligned_cols=87 Identities=24% Similarity=0.378 Sum_probs=77.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCC---------CEEEEecCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGG---------ATVLSGSHDR 71 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~---------~~~~s~~~~~ 71 (93)
|+++|.++.|.|. +.+++++. .|+++++|......+...+.+|...|+.+ |+|.+ ..+++++.|+
T Consensus 358 H~g~V~alk~n~t----g~LLaS~S-dD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~ds 432 (524)
T KOG0273|consen 358 HHGEVNALKWNPT----GSLLASCS-DDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDS 432 (524)
T ss_pred ccCceEEEEECCC----CceEEEec-CCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCC
Confidence 8899999999998 77777776 69999999998888899999999999999 88853 4688999999
Q ss_pred cEEEEeCCCCceeeEecCccCC
Q psy14456 72 TVRFWDLRTRGCTNVLTPITVP 93 (93)
Q Consensus 72 ~i~~~d~~~~~~~~~~~~~~~~ 93 (93)
++++||+..+.++..|..|..|
T Consensus 433 tV~lwdv~~gv~i~~f~kH~~p 454 (524)
T KOG0273|consen 433 TVKLWDVESGVPIHTLMKHQEP 454 (524)
T ss_pred eEEEEEccCCceeEeeccCCCc
Confidence 9999999999999999888765
No 33
>KOG0283|consensus
Probab=99.62 E-value=2.9e-15 Score=92.12 Aligned_cols=75 Identities=21% Similarity=0.418 Sum_probs=67.5
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-Eec-CCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d~~ 79 (93)
|++.|.++.|+.+ ++|++++ .|.+|++|++....|++.|. |.+-|+|+ |+| |.+++++|+.|+.+++|++.
T Consensus 368 Ht~DILDlSWSKn-----~fLLSSS-MDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~ 440 (712)
T KOG0283|consen 368 HTADILDLSWSKN-----NFLLSSS-MDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVDDRYFISGSLDGKVRLWSIS 440 (712)
T ss_pred cchhheecccccC-----CeeEecc-ccccEEeecCCCcceeeEEe-cCCeeEEEEecccCCCcEeecccccceEEeecC
Confidence 8899999999974 6778876 59999999999999999885 99999999 999 88999999999999999988
Q ss_pred CCce
Q psy14456 80 TRGC 83 (93)
Q Consensus 80 ~~~~ 83 (93)
..+.
T Consensus 441 d~~V 444 (712)
T KOG0283|consen 441 DKKV 444 (712)
T ss_pred cCee
Confidence 6543
No 34
>PTZ00420 coronin; Provisional
Probab=99.61 E-value=2.9e-14 Score=87.29 Aligned_cols=82 Identities=23% Similarity=0.300 Sum_probs=66.3
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCc--------eeEEeeccccceEEE-EecCCCE-EEEecCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQ--------AFQALSGHSGHVLSL-YNWGGAT-VLSGSHDR 71 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~--------~~~~~~~~~~~v~~~-~~~~~~~-~~s~~~~~ 71 (93)
|++.|.+++|+|.. +..+++++ .|+.|++|++.++. ++..+.+|...|.++ |+|++.. +++++.|+
T Consensus 73 H~~~V~~lafsP~~---~~lLASgS-~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~Dg 148 (568)
T PTZ00420 73 HTSSILDLQFNPCF---SEILASGS-EDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDS 148 (568)
T ss_pred CCCCEEEEEEcCCC---CCEEEEEe-CCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCC
Confidence 78999999999962 45666665 69999999987542 344677899999999 9997765 57899999
Q ss_pred cEEEEeCCCCceeeEe
Q psy14456 72 TVRFWDLRTRGCTNVL 87 (93)
Q Consensus 72 ~i~~~d~~~~~~~~~~ 87 (93)
.+++||+++++....+
T Consensus 149 tIrIWDl~tg~~~~~i 164 (568)
T PTZ00420 149 FVNIWDIENEKRAFQI 164 (568)
T ss_pred eEEEEECCCCcEEEEE
Confidence 9999999998766554
No 35
>KOG0264|consensus
Probab=99.61 E-value=7.5e-15 Score=85.55 Aligned_cols=75 Identities=21% Similarity=0.407 Sum_probs=65.4
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC-ceeEEeeccccceEEE-EecC-CCEEEEecCCCcEEEEeC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG-QAFQALSGHSGHVLSL-YNWG-GATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~-~~~~~~~~~~~~v~~~-~~~~-~~~~~s~~~~~~i~~~d~ 78 (93)
|++.|.|++|.|- +.+++++|+.|++|.+||++.. .++..+.+|...|..+ |+|. ...+++++.|+.+++||+
T Consensus 271 h~~~vn~~~fnp~----~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDl 346 (422)
T KOG0264|consen 271 HSAEVNCVAFNPF----NEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDL 346 (422)
T ss_pred cCCceeEEEeCCC----CCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEec
Confidence 8899999999998 5666666667999999999865 4678999999999999 9994 567889999999999998
Q ss_pred CC
Q psy14456 79 RT 80 (93)
Q Consensus 79 ~~ 80 (93)
..
T Consensus 347 s~ 348 (422)
T KOG0264|consen 347 SR 348 (422)
T ss_pred cc
Confidence 75
No 36
>KOG0264|consensus
Probab=99.60 E-value=5.5e-15 Score=86.07 Aligned_cols=86 Identities=27% Similarity=0.386 Sum_probs=72.1
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC--CceeEEeeccccceEEE-Eec-CCCEEEEecCCCcEEEEe
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT--GQAFQALSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~--~~~~~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d 77 (93)
|+..|..++|++-. .+.|+++| .|+.+.+||.++ .++.....+|.+.+.|+ |+| ++..|+|++.|+++.+||
T Consensus 226 h~~~VeDV~~h~~h---~~lF~sv~-dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwD 301 (422)
T KOG0264|consen 226 HEDVVEDVAWHPLH---EDLFGSVG-DDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWD 301 (422)
T ss_pred CCcceehhhccccc---hhhheeec-CCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEee
Confidence 78899999999985 56677777 699999999994 55566778999999999 999 677889999999999999
Q ss_pred CCCC-ceeeEecCcc
Q psy14456 78 LRTR-GCTNVLTPIT 91 (93)
Q Consensus 78 ~~~~-~~~~~~~~~~ 91 (93)
+|+- +++.++..|.
T Consensus 302 lRnL~~~lh~~e~H~ 316 (422)
T KOG0264|consen 302 LRNLNKPLHTFEGHE 316 (422)
T ss_pred chhcccCceeccCCC
Confidence 9974 4677776664
No 37
>KOG0276|consensus
Probab=99.60 E-value=3.1e-15 Score=90.68 Aligned_cols=86 Identities=26% Similarity=0.385 Sum_probs=76.5
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-Eec--CCCEEEEecCCCcEEEEeC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNW--GGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~--~~~~~~s~~~~~~i~~~d~ 78 (93)
|+--|-+++|.|.. .+.+++++ -|++|++|.+....+.+++.+|...|+|+ |-+ +..++++|+.|.++++||+
T Consensus 139 H~HyVMqv~fnPkD---~ntFaS~s-LDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDy 214 (794)
T KOG0276|consen 139 HEHYVMQVAFNPKD---PNTFASAS-LDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDY 214 (794)
T ss_pred cceEEEEEEecCCC---ccceeeee-ccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeec
Confidence 67789999999985 66777776 59999999999999999999999999999 766 4468999999999999999
Q ss_pred CCCceeeEecCcc
Q psy14456 79 RTRGCTNVLTPIT 91 (93)
Q Consensus 79 ~~~~~~~~~~~~~ 91 (93)
++.+|++++.+|+
T Consensus 215 Qtk~CV~TLeGHt 227 (794)
T KOG0276|consen 215 QTKSCVQTLEGHT 227 (794)
T ss_pred chHHHHHHhhccc
Confidence 9999999999885
No 38
>KOG0289|consensus
Probab=99.60 E-value=1.2e-14 Score=85.02 Aligned_cols=80 Identities=20% Similarity=0.367 Sum_probs=69.8
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCce
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGC 83 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~ 83 (93)
.+++.+|+|+ +-.+.+ |..|+.+++||+.....+..|.+|+++|..+ |+.+|.++++++.|+.+++||+|+...
T Consensus 349 ~~ts~~fHpD----gLifgt-gt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n 423 (506)
T KOG0289|consen 349 EYTSAAFHPD----GLIFGT-GTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKN 423 (506)
T ss_pred eeEEeeEcCC----ceEEec-cCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcc
Confidence 3889999999 555544 5679999999999998899999999999999 999999999999999999999998776
Q ss_pred eeEecC
Q psy14456 84 TNVLTP 89 (93)
Q Consensus 84 ~~~~~~ 89 (93)
.++|..
T Consensus 424 ~kt~~l 429 (506)
T KOG0289|consen 424 FKTIQL 429 (506)
T ss_pred cceeec
Confidence 666643
No 39
>KOG0303|consensus
Probab=99.59 E-value=9.8e-15 Score=84.60 Aligned_cols=85 Identities=25% Similarity=0.362 Sum_probs=75.3
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|+.+|..+.|+|.. .+.++++|+ |..|.+|++.+++.+..+. |...|.++ |+.+|.++++.+.|+.|++||.++
T Consensus 130 H~rrVg~V~wHPtA---~NVLlsag~-Dn~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~ 204 (472)
T KOG0303|consen 130 HQRRVGLVQWHPTA---PNVLLSAGS-DNTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRR 204 (472)
T ss_pred cceeEEEEeecccc---hhhHhhccC-CceEEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCC
Confidence 78899999999984 566777775 9999999999999988887 99999999 999999999999999999999999
Q ss_pred CceeeEecCcc
Q psy14456 81 RGCTNVLTPIT 91 (93)
Q Consensus 81 ~~~~~~~~~~~ 91 (93)
+..+..-..|+
T Consensus 205 ~~~v~e~~~he 215 (472)
T KOG0303|consen 205 GTVVSEGVAHE 215 (472)
T ss_pred CcEeeeccccc
Confidence 98776655543
No 40
>KOG0296|consensus
Probab=99.59 E-value=4.7e-14 Score=80.95 Aligned_cols=81 Identities=26% Similarity=0.416 Sum_probs=74.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|+++|.+++.+|+ .++++++| .|-.-.+|++.++.....+.+|+..|.++ |+.++.+++||..++.+.+|+..+
T Consensus 63 H~~svFavsl~P~----~~l~aTGG-gDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~st 137 (399)
T KOG0296|consen 63 HTDSVFAVSLHPN----NNLVATGG-GDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVST 137 (399)
T ss_pred cCCceEEEEeCCC----CceEEecC-CCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEccc
Confidence 8999999999996 67777776 69999999999999999999999999999 999999999999999999999999
Q ss_pred CceeeEe
Q psy14456 81 RGCTNVL 87 (93)
Q Consensus 81 ~~~~~~~ 87 (93)
+.....+
T Consensus 138 g~~~~~~ 144 (399)
T KOG0296|consen 138 GGEQWKL 144 (399)
T ss_pred CceEEEe
Confidence 9877666
No 41
>KOG0275|consensus
Probab=99.59 E-value=3.5e-16 Score=89.13 Aligned_cols=86 Identities=33% Similarity=0.476 Sum_probs=78.5
Q ss_pred CCccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEee-ccccceEEE-EecCCCEEEEecCCCcEEEEeC
Q psy14456 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALS-GHSGHVLSL-YNWGGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~-~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~ 78 (93)
||..+|.|+.|+.+ ...+++ |+.||.|++|.+++|.|+..+. .|...++++ |+.++..+++++.|.++++.-+
T Consensus 261 Mmd~aVlci~FSRD----sEMlAs-GsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGl 335 (508)
T KOG0275|consen 261 MMDDAVLCISFSRD----SEMLAS-GSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGL 335 (508)
T ss_pred ecccceEEEeeccc----HHHhhc-cCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEecc
Confidence 67889999999998 565555 5689999999999999999986 899999999 9999999999999999999999
Q ss_pred CCCceeeEecCcc
Q psy14456 79 RTRGCTNVLTPIT 91 (93)
Q Consensus 79 ~~~~~~~~~~~~~ 91 (93)
.+|++++.|++|+
T Consensus 336 KSGK~LKEfrGHs 348 (508)
T KOG0275|consen 336 KSGKCLKEFRGHS 348 (508)
T ss_pred ccchhHHHhcCcc
Confidence 9999999999885
No 42
>KOG0281|consensus
Probab=99.58 E-value=1.7e-15 Score=86.90 Aligned_cols=79 Identities=32% Similarity=0.474 Sum_probs=68.3
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCc
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRG 82 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~ 82 (93)
..|+|+.+.. .+++ +|.+|.+|++||.++..++..+.+|++.+.|+ | +...+++|+.|.++++||.++++
T Consensus 198 kgVYClQYDD------~kiV-SGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqy--d~rviisGSSDsTvrvWDv~tge 268 (499)
T KOG0281|consen 198 KGVYCLQYDD------EKIV-SGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQY--DERVIVSGSSDSTVRVWDVNTGE 268 (499)
T ss_pred CceEEEEecc------hhhh-cccccCceEEeccccHHHHHhhhcCCCcEEeeec--cceEEEecCCCceEEEEeccCCc
Confidence 5689998854 3444 46799999999999999999999999999999 7 56699999999999999999999
Q ss_pred eeeEecCcc
Q psy14456 83 CTNVLTPIT 91 (93)
Q Consensus 83 ~~~~~~~~~ 91 (93)
++.++..|.
T Consensus 269 ~l~tlihHc 277 (499)
T KOG0281|consen 269 PLNTLIHHC 277 (499)
T ss_pred hhhHHhhhc
Confidence 988877664
No 43
>KOG0647|consensus
Probab=99.58 E-value=4.3e-14 Score=79.59 Aligned_cols=80 Identities=36% Similarity=0.629 Sum_probs=67.9
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCC--EEEEecCCCcEEEEeC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGA--TVLSGSHDRTVRFWDL 78 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~--~~~s~~~~~~i~~~d~ 78 (93)
|.++|.+++|+.+ +.+++++++ |+.+++||+.+++. ..+..|.+++.++ |-+... .|+||+.|.+++.||.
T Consensus 71 ~~~PvL~v~Wsdd----gskVf~g~~-Dk~~k~wDL~S~Q~-~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~ 144 (347)
T KOG0647|consen 71 HDGPVLDVCWSDD----GSKVFSGGC-DKQAKLWDLASGQV-SQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDT 144 (347)
T ss_pred cCCCeEEEEEccC----CceEEeecc-CCceEEEEccCCCe-eeeeecccceeEEEEecCCCcceeEecccccceeeccc
Confidence 7899999999999 788888885 99999999999965 4456799999999 776544 7899999999999999
Q ss_pred CCCceeeEe
Q psy14456 79 RTRGCTNVL 87 (93)
Q Consensus 79 ~~~~~~~~~ 87 (93)
|+...+..+
T Consensus 145 R~~~pv~t~ 153 (347)
T KOG0647|consen 145 RSSNPVATL 153 (347)
T ss_pred CCCCeeeee
Confidence 987665554
No 44
>KOG0279|consensus
Probab=99.58 E-value=3.8e-14 Score=79.02 Aligned_cols=74 Identities=30% Similarity=0.522 Sum_probs=68.1
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|.-.|..+..+++ +++.++++ .|+++++||+.+++..+.|.+|...+.++ |+++.+.+++|+.|+++++|+...
T Consensus 62 HsH~v~dv~~s~d----g~~alS~s-wD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g 136 (315)
T KOG0279|consen 62 HSHFVSDVVLSSD----GNFALSAS-WDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLG 136 (315)
T ss_pred cceEecceEEccC----CceEEecc-ccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecc
Confidence 6778999999999 78777766 69999999999999999999999999999 999999999999999999999864
No 45
>KOG0275|consensus
Probab=99.58 E-value=2.3e-15 Score=85.89 Aligned_cols=85 Identities=26% Similarity=0.471 Sum_probs=78.2
Q ss_pred CCccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
.|+..|+|+.|+.+ ++.+++++ -|.++++.-+.+|++++.+.+|.+.++.. |.++|..+++++.|+++++|+..
T Consensus 304 AHtkGvt~l~FSrD----~SqiLS~s-fD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~K 378 (508)
T KOG0275|consen 304 AHTKGVTCLSFSRD----NSQILSAS-FDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHGK 378 (508)
T ss_pred hhccCeeEEEEccC----cchhhccc-ccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCccEEEecCc
Confidence 38899999999999 67778776 59999999999999999999999999999 99999999999999999999999
Q ss_pred CCceeeEecCc
Q psy14456 80 TRGCTNVLTPI 90 (93)
Q Consensus 80 ~~~~~~~~~~~ 90 (93)
+..|+.+|...
T Consensus 379 tteC~~Tfk~~ 389 (508)
T KOG0275|consen 379 TTECLSTFKPL 389 (508)
T ss_pred chhhhhhccCC
Confidence 99999888753
No 46
>KOG0295|consensus
Probab=99.57 E-value=2.8e-14 Score=81.85 Aligned_cols=87 Identities=30% Similarity=0.480 Sum_probs=79.7
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|.-.|.++.|-|. +..+++++ +|.+|++|+..++.+++++.+|...+..+ .+.||..+++++.|.++++|-+.+
T Consensus 192 h~h~vS~V~f~P~----gd~ilS~s-rD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t 266 (406)
T KOG0295|consen 192 HEHGVSSVFFLPL----GDHILSCS-RDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVAT 266 (406)
T ss_pred cccceeeEEEEec----CCeeeecc-cccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEecc
Confidence 5667999999998 78888877 89999999999999999999999999888 888999999999999999999999
Q ss_pred CceeeEecCccCC
Q psy14456 81 RGCTNVLTPITVP 93 (93)
Q Consensus 81 ~~~~~~~~~~~~~ 93 (93)
++|...++.|+.|
T Consensus 267 ~~~k~~lR~hEh~ 279 (406)
T KOG0295|consen 267 KQCKAELREHEHP 279 (406)
T ss_pred chhhhhhhccccc
Confidence 9998888888764
No 47
>KOG1273|consensus
Probab=99.56 E-value=2.4e-14 Score=81.27 Aligned_cols=78 Identities=22% Similarity=0.331 Sum_probs=70.7
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCcee
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCT 84 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~ 84 (93)
..|+.|++. +.+++.++ .+|.+-+||+.+...-+.+.+|..+|.++ |+++|++++|++.|..+.+||+..|.++
T Consensus 26 a~~~~Fs~~----G~~lAvGc-~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l 100 (405)
T KOG1273|consen 26 AECCQFSRW----GDYLAVGC-ANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPL 100 (405)
T ss_pred cceEEeccC----cceeeeec-cCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCce
Confidence 678999998 67777655 69999999999998888899999999999 9999999999999999999999999988
Q ss_pred eEec
Q psy14456 85 NVLT 88 (93)
Q Consensus 85 ~~~~ 88 (93)
+.++
T Consensus 101 ~rir 104 (405)
T KOG1273|consen 101 KRIR 104 (405)
T ss_pred eEEE
Confidence 7765
No 48
>KOG1034|consensus
Probab=99.56 E-value=2.6e-14 Score=81.28 Aligned_cols=76 Identities=24% Similarity=0.528 Sum_probs=65.9
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEe---eccccceEEE-EecCCCEEEEecCCCcEEEEe
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQAL---SGHSGHVLSL-YNWGGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~---~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d 77 (93)
|...|..+.++|.. .+++++ +++|..|++|+++++.++..+ .+|...|.++ |+.++..+++++.|..+++|+
T Consensus 134 hG~sINeik~~p~~---~qlvls-~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~ 209 (385)
T KOG1034|consen 134 HGGSINEIKFHPDR---PQLVLS-ASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWR 209 (385)
T ss_pred cCccchhhhcCCCC---CcEEEE-ecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEe
Confidence 77899999999983 345555 557999999999999988766 5799999999 999999999999999999999
Q ss_pred CCCC
Q psy14456 78 LRTR 81 (93)
Q Consensus 78 ~~~~ 81 (93)
+...
T Consensus 210 l~~~ 213 (385)
T KOG1034|consen 210 LNVK 213 (385)
T ss_pred cChh
Confidence 9854
No 49
>KOG0643|consensus
Probab=99.56 E-value=1.2e-13 Score=76.86 Aligned_cols=82 Identities=23% Similarity=0.462 Sum_probs=76.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|..+++.+.|..+ +.++++++ .|....+|-...|+.+.++.+|++.|.++ .+.+...+++|+.|..+++||+++
T Consensus 9 HERplTqiKyN~e----GDLlFsca-KD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~t 83 (327)
T KOG0643|consen 9 HERPLTQIKYNRE----GDLLFSCA-KDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVET 83 (327)
T ss_pred CccccceEEecCC----CcEEEEec-CCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCC
Confidence 7889999999998 89999998 69999999998999999999999999999 888899999999999999999999
Q ss_pred CceeeEec
Q psy14456 81 RGCTNVLT 88 (93)
Q Consensus 81 ~~~~~~~~ 88 (93)
|+++..+.
T Consensus 84 Gk~la~~k 91 (327)
T KOG0643|consen 84 GKQLATWK 91 (327)
T ss_pred CcEEEEee
Confidence 99887765
No 50
>KOG0315|consensus
Probab=99.55 E-value=1.2e-13 Score=76.36 Aligned_cols=81 Identities=23% Similarity=0.394 Sum_probs=69.5
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|++.|+.+.|.-+ ++.+++++ +||+++|||++..++...+ .+.++|+++ .+|...-|+++..++.|++||+..
T Consensus 82 h~kNVtaVgF~~d----grWMyTgs-eDgt~kIWdlR~~~~qR~~-~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~ 155 (311)
T KOG0315|consen 82 HTKNVTAVGFQCD----GRWMYTGS-EDGTVKIWDLRSLSCQRNY-QHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGE 155 (311)
T ss_pred cCCceEEEEEeec----CeEEEecC-CCceEEEEeccCcccchhc-cCCCCcceEEecCCcceEEeecCCCcEEEEEccC
Confidence 7889999999998 89999987 7999999999986665555 477999999 999888899999999999999998
Q ss_pred CceeeEec
Q psy14456 81 RGCTNVLT 88 (93)
Q Consensus 81 ~~~~~~~~ 88 (93)
..+...+.
T Consensus 156 ~~c~~~li 163 (311)
T KOG0315|consen 156 NSCTHELI 163 (311)
T ss_pred CccccccC
Confidence 86655443
No 51
>KOG0277|consensus
Probab=99.55 E-value=1.2e-13 Score=76.41 Aligned_cols=86 Identities=21% Similarity=0.284 Sum_probs=73.0
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-Eec-CCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d~~ 79 (93)
|...|.++.|.+.. +..++++ +=|++|++|+.+....+.++.+|++.|... |+| .++++++++.|+++++||++
T Consensus 103 H~~EV~Svdwn~~~---r~~~lts-SWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr 178 (311)
T KOG0277|consen 103 HKREVYSVDWNTVR---RRIFLTS-SWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVR 178 (311)
T ss_pred hhhheEEecccccc---ceeEEee-ccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEec
Confidence 77889999998874 4556665 579999999999999999999999999999 999 68899999999999999999
Q ss_pred CCceeeEecCcc
Q psy14456 80 TRGCTNVLTPIT 91 (93)
Q Consensus 80 ~~~~~~~~~~~~ 91 (93)
.......|..|.
T Consensus 179 ~~gk~~~i~ah~ 190 (311)
T KOG0277|consen 179 SPGKFMSIEAHN 190 (311)
T ss_pred CCCceeEEEecc
Confidence 765555566554
No 52
>KOG0308|consensus
Probab=99.54 E-value=7.9e-14 Score=84.81 Aligned_cols=85 Identities=26% Similarity=0.451 Sum_probs=75.0
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
+..+|++++-.+. +..++++| ..+.+++||.++.+.+-.+.+|+..|.++ .+.+|..+++++.|++|++||+..
T Consensus 170 ~k~siYSLA~N~t----~t~ivsGg-tek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgq 244 (735)
T KOG0308|consen 170 PKDSIYSLAMNQT----GTIIVSGG-TEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQ 244 (735)
T ss_pred CccceeeeecCCc----ceEEEecC-cccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccc
Confidence 3467888888776 56667766 59999999999999998999999999999 999999999999999999999999
Q ss_pred CceeeEecCcc
Q psy14456 81 RGCTNVLTPIT 91 (93)
Q Consensus 81 ~~~~~~~~~~~ 91 (93)
..|+.++..|.
T Consensus 245 QrCl~T~~vH~ 255 (735)
T KOG0308|consen 245 QRCLATYIVHK 255 (735)
T ss_pred cceeeeEEecc
Confidence 99999987764
No 53
>KOG0645|consensus
Probab=99.54 E-value=3.1e-13 Score=75.26 Aligned_cols=85 Identities=25% Similarity=0.452 Sum_probs=72.5
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC--ceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG--QAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~ 78 (93)
|+..|..++|+|. ++++++ ++-|.++.+|.-..+ +++..+.+|.++|.++ |+.+|++|++|+.|+.+-+|.+
T Consensus 60 hkrsVRsvAwsp~----g~~La~-aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~ 134 (312)
T KOG0645|consen 60 HKRSVRSVAWSPH----GRYLAS-ASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEI 134 (312)
T ss_pred chheeeeeeecCC----CcEEEE-eeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEe
Confidence 8899999999998 676655 457999999986644 6788999999999999 9999999999999999999988
Q ss_pred CCC---ceeeEecCcc
Q psy14456 79 RTR---GCTNVLTPIT 91 (93)
Q Consensus 79 ~~~---~~~~~~~~~~ 91 (93)
..+ .+..++.+|+
T Consensus 135 deddEfec~aVL~~Ht 150 (312)
T KOG0645|consen 135 DEDDEFECIAVLQEHT 150 (312)
T ss_pred cCCCcEEEEeeecccc
Confidence 754 4667776665
No 54
>KOG0281|consensus
Probab=99.54 E-value=9.9e-15 Score=83.84 Aligned_cols=82 Identities=32% Similarity=0.514 Sum_probs=70.9
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEEEecCCCEEEEecCCCcEEEEeCCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~ 81 (93)
|.++|+.+.|+ .++++++. .|.++++|+..+...+.++.+|+-.|.|+ -..+.++++|+.|.+|++||++.|
T Consensus 319 HrAaVNvVdfd------~kyIVsAS-gDRTikvW~~st~efvRtl~gHkRGIACl-QYr~rlvVSGSSDntIRlwdi~~G 390 (499)
T KOG0281|consen 319 HRAAVNVVDFD------DKYIVSAS-GDRTIKVWSTSTCEFVRTLNGHKRGIACL-QYRDRLVVSGSSDNTIRLWDIECG 390 (499)
T ss_pred hhhheeeeccc------cceEEEec-CCceEEEEeccceeeehhhhcccccceeh-hccCeEEEecCCCceEEEEecccc
Confidence 67788888885 35666665 59999999999999999999999999887 236889999999999999999999
Q ss_pred ceeeEecCcc
Q psy14456 82 GCTNVLTPIT 91 (93)
Q Consensus 82 ~~~~~~~~~~ 91 (93)
.+++++.+|+
T Consensus 391 ~cLRvLeGHE 400 (499)
T KOG0281|consen 391 ACLRVLEGHE 400 (499)
T ss_pred HHHHHHhchH
Confidence 9999998875
No 55
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.54 E-value=5.6e-13 Score=74.11 Aligned_cols=84 Identities=42% Similarity=0.661 Sum_probs=72.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|.++|.+++|+|+ ++.+++++ .++.+.+|+...+.....+..|...+..+ |.+++..+++++.++.+.+||+++
T Consensus 8 h~~~i~~~~~~~~----~~~l~~~~-~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~ 82 (289)
T cd00200 8 HTGGVTCVAFSPD----GKLLATGS-GDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLET 82 (289)
T ss_pred cCCCEEEEEEcCC----CCEEEEee-cCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCc
Confidence 7899999999998 67777776 59999999999888888888888888888 999888999999999999999998
Q ss_pred CceeeEecCc
Q psy14456 81 RGCTNVLTPI 90 (93)
Q Consensus 81 ~~~~~~~~~~ 90 (93)
+.....+..+
T Consensus 83 ~~~~~~~~~~ 92 (289)
T cd00200 83 GECVRTLTGH 92 (289)
T ss_pred ccceEEEecc
Confidence 7666666544
No 56
>KOG0647|consensus
Probab=99.52 E-value=1.1e-13 Score=77.97 Aligned_cols=84 Identities=23% Similarity=0.477 Sum_probs=67.5
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC-Ccee-EEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT-GQAF-QALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~-~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
...|.+++|+|. ...++++|+=|++||+|+++. +... +....|.+++.++ |+.++.++++++.|+.+++||+.
T Consensus 27 ~DsIS~l~FSP~----~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~ 102 (347)
T KOG0647|consen 27 EDSISALAFSPQ----ADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLA 102 (347)
T ss_pred ccchheeEeccc----cCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEcc
Confidence 357899999996 566776777899999999875 3332 4456789999999 99999999999999999999999
Q ss_pred CCceeeEecCcc
Q psy14456 80 TRGCTNVLTPIT 91 (93)
Q Consensus 80 ~~~~~~~~~~~~ 91 (93)
+++. ..+..|.
T Consensus 103 S~Q~-~~v~~Hd 113 (347)
T KOG0647|consen 103 SGQV-SQVAAHD 113 (347)
T ss_pred CCCe-eeeeecc
Confidence 9954 3344443
No 57
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.52 E-value=6.1e-13 Score=84.47 Aligned_cols=83 Identities=20% Similarity=0.336 Sum_probs=70.0
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-Eec-CCCEEEEecCCCcEEEEeCCC
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d~~~ 80 (93)
...|.+++|++.. +..+++++ .|+.|++||+.+++.+..+.+|...|.++ |++ ++.++++++.|+.+++||+++
T Consensus 532 ~~~v~~l~~~~~~---~~~las~~-~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~ 607 (793)
T PLN00181 532 RSKLSGICWNSYI---KSQVASSN-FEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQ 607 (793)
T ss_pred cCceeeEEeccCC---CCEEEEEe-CCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCC
Confidence 3567889998753 45666666 69999999999999889999999999999 987 788999999999999999998
Q ss_pred CceeeEecC
Q psy14456 81 RGCTNVLTP 89 (93)
Q Consensus 81 ~~~~~~~~~ 89 (93)
+.++..+..
T Consensus 608 ~~~~~~~~~ 616 (793)
T PLN00181 608 GVSIGTIKT 616 (793)
T ss_pred CcEEEEEec
Confidence 877766543
No 58
>KOG0316|consensus
Probab=99.51 E-value=1.1e-13 Score=75.97 Aligned_cols=81 Identities=35% Similarity=0.510 Sum_probs=70.6
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|...|..++.+.+ +..++++|. |..+.+||+++|+....+.+|.+.|+.+ |+.+...+++++.|..+++||-++
T Consensus 58 hG~EVlD~~~s~D----nskf~s~Gg-Dk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS 132 (307)
T KOG0316|consen 58 HGHEVLDAALSSD----NSKFASCGG-DKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRS 132 (307)
T ss_pred CCceeeecccccc----ccccccCCC-CceEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEccc
Confidence 4556777777777 778899884 9999999999999999999999999999 999999999999999999999987
Q ss_pred C--ceeeEe
Q psy14456 81 R--GCTNVL 87 (93)
Q Consensus 81 ~--~~~~~~ 87 (93)
. ++++.+
T Consensus 133 ~s~ePiQil 141 (307)
T KOG0316|consen 133 RSFEPIQIL 141 (307)
T ss_pred CCCCccchh
Confidence 5 345554
No 59
>KOG1407|consensus
Probab=99.51 E-value=5.4e-14 Score=77.97 Aligned_cols=52 Identities=21% Similarity=0.518 Sum_probs=46.7
Q ss_pred eeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEecCccCC
Q psy14456 42 AFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLTPITVP 93 (93)
Q Consensus 42 ~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~~~ 93 (93)
++..+++|.....|+ |+|+|+++++|+.|..+.+||+..--|.+.|..+.+|
T Consensus 181 pv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwp 233 (313)
T KOG1407|consen 181 PVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWP 233 (313)
T ss_pred cccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCc
Confidence 456777899999999 9999999999999999999999999999999887665
No 60
>KOG0310|consensus
Probab=99.51 E-value=6.2e-13 Score=78.53 Aligned_cols=82 Identities=27% Similarity=0.327 Sum_probs=69.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-Eec-CCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d~~ 79 (93)
|+.+|....|+|. ...++++|+.|+.+++||+.+......+.+|++.|.+. ++| .+..++||+.|+.|++||.+
T Consensus 109 h~apv~~~~f~~~----d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR 184 (487)
T KOG0310|consen 109 HQAPVHVTKFSPQ----DNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTR 184 (487)
T ss_pred ccCceeEEEeccc----CCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEec
Confidence 8899999999998 56666667679999999999988766889999999999 988 45688999999999999999
Q ss_pred CC-ceeeEe
Q psy14456 80 TR-GCTNVL 87 (93)
Q Consensus 80 ~~-~~~~~~ 87 (93)
.. ..+..+
T Consensus 185 ~~~~~v~el 193 (487)
T KOG0310|consen 185 SLTSRVVEL 193 (487)
T ss_pred cCCceeEEe
Confidence 87 444444
No 61
>KOG0269|consensus
Probab=99.51 E-value=7.9e-14 Score=86.04 Aligned_cols=41 Identities=27% Similarity=0.551 Sum_probs=36.2
Q ss_pred eeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCc
Q psy14456 42 AFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRG 82 (93)
Q Consensus 42 ~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~ 82 (93)
+...+.+|++++.|+ |+|+..+|+||+.|+.+++||...+.
T Consensus 212 ~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~ 253 (839)
T KOG0269|consen 212 CEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSR 253 (839)
T ss_pred HHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCC
Confidence 445667899999999 99999999999999999999988653
No 62
>KOG0313|consensus
Probab=99.51 E-value=1.1e-13 Score=79.78 Aligned_cols=82 Identities=30% Similarity=0.398 Sum_probs=67.4
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCc---eeEEeeccccceEEE-Eec-CCCEEEEecCCCcEEEEeC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQ---AFQALSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~---~~~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d~ 78 (93)
..++|++++|. ..++++++ .|..+++||.+++. ..+.+.+|++.|..+ |+| +...+++++.|+++++||+
T Consensus 301 ksl~~i~~~~~----~~Ll~~gs-sdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDv 375 (423)
T KOG0313|consen 301 KSLNCISYSPL----SKLLASGS-SDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDV 375 (423)
T ss_pred cceeEeecccc----cceeeecC-CCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEe
Confidence 46778888886 56666665 59999999998763 357888999999999 999 5678899999999999999
Q ss_pred CCCc-eeeEecCc
Q psy14456 79 RTRG-CTNVLTPI 90 (93)
Q Consensus 79 ~~~~-~~~~~~~~ 90 (93)
|+.. .+..+.+|
T Consensus 376 RS~k~plydI~~h 388 (423)
T KOG0313|consen 376 RSTKAPLYDIAGH 388 (423)
T ss_pred ccCCCcceeeccC
Confidence 9876 78777766
No 63
>KOG0274|consensus
Probab=99.51 E-value=1.2e-13 Score=84.24 Aligned_cols=82 Identities=43% Similarity=0.644 Sum_probs=71.2
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|+++|.++... ...++++ +.|++|++|++.+++++..+.+|+..|.++ +... ..+++|+.|+.|++||+++
T Consensus 330 h~~~V~~v~~~------~~~lvsg-s~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~ 401 (537)
T KOG0274|consen 330 HTGPVNCVQLD------EPLLVSG-SYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRT 401 (537)
T ss_pred ccccEEEEEec------CCEEEEE-ecCceEEEEEhhhceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCc
Confidence 88999999986 3455555 479999999999999999999999999998 6544 8899999999999999999
Q ss_pred C-ceeeEecCcc
Q psy14456 81 R-GCTNVLTPIT 91 (93)
Q Consensus 81 ~-~~~~~~~~~~ 91 (93)
. +|+..+..|.
T Consensus 402 ~~~c~~tl~~h~ 413 (537)
T KOG0274|consen 402 KRKCIHTLQGHT 413 (537)
T ss_pred hhhhhhhhcCCc
Confidence 9 8888887764
No 64
>KOG0274|consensus
Probab=99.50 E-value=7.8e-13 Score=80.77 Aligned_cols=86 Identities=36% Similarity=0.567 Sum_probs=74.1
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEEEecCCCEEEEecCCCcEEEEeCCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~ 81 (93)
|.+.|.++++.-. +.+++++ +.|.++++||..++++...+.+|.+.+.++ ...+..+++|+.|.++++|+++++
T Consensus 248 H~g~V~~l~~~~~----~~~lvsg-S~D~t~rvWd~~sg~C~~~l~gh~stv~~~-~~~~~~~~sgs~D~tVkVW~v~n~ 321 (537)
T KOG0274|consen 248 HFGGVWGLAFPSG----GDKLVSG-STDKTERVWDCSTGECTHSLQGHTSSVRCL-TIDPFLLVSGSRDNTVKVWDVTNG 321 (537)
T ss_pred CCCCceeEEEecC----CCEEEEE-ecCCcEEeEecCCCcEEEEecCCCceEEEE-EccCceEeeccCCceEEEEeccCc
Confidence 8899999999753 5666665 469999999999999999999999999987 556778888999999999999999
Q ss_pred ceeeEecCccCC
Q psy14456 82 GCTNVLTPITVP 93 (93)
Q Consensus 82 ~~~~~~~~~~~~ 93 (93)
.++..+.+|..|
T Consensus 322 ~~l~l~~~h~~~ 333 (537)
T KOG0274|consen 322 ACLNLLRGHTGP 333 (537)
T ss_pred ceEEEecccccc
Confidence 999999877653
No 65
>KOG0282|consensus
Probab=99.50 E-value=2.3e-14 Score=84.46 Aligned_cols=82 Identities=22% Similarity=0.332 Sum_probs=69.6
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCC-CEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGG-ATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~-~~~~s~~~~~~i~~~d~~ 79 (93)
|..+|.+++|+++ +..+++++ -|+.+++||.++|+++..+. -...+.|+ |+|++ +.+++|..|+.|+.||+|
T Consensus 257 H~k~Vrd~~~s~~----g~~fLS~s-fD~~lKlwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiR 330 (503)
T KOG0282|consen 257 HRKPVRDASFNNC----GTSFLSAS-FDRFLKLWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIR 330 (503)
T ss_pred chhhhhhhhcccc----CCeeeeee-cceeeeeeccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEecc
Confidence 7889999999998 77888887 69999999999999999884 23456788 99977 788899999999999999
Q ss_pred CCceeeEecC
Q psy14456 80 TRGCTNVLTP 89 (93)
Q Consensus 80 ~~~~~~~~~~ 89 (93)
++..++.+..
T Consensus 331 s~kvvqeYd~ 340 (503)
T KOG0282|consen 331 SGKVVQEYDR 340 (503)
T ss_pred chHHHHHHHh
Confidence 9976655543
No 66
>KOG0641|consensus
Probab=99.50 E-value=1e-12 Score=72.17 Aligned_cols=89 Identities=58% Similarity=1.178 Sum_probs=79.8
Q ss_pred CCccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEEEecCCCEEEEecCCCcEEEEeCCC
Q psy14456 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
||.+.|..++|..+.+.++..++++|..|..|.+-|..+++..+.+.+|++.|..+++..+-.+++++.|.+|+.||++-
T Consensus 134 mhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtghilalyswn~~m~~sgsqdktirfwdlrv 213 (350)
T KOG0641|consen 134 MHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGHILALYSWNGAMFASGSQDKTIRFWDLRV 213 (350)
T ss_pred ecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecCCcccEEEEEEecCcEEEccCCCceEEEEeeec
Confidence 79999999999988777778888888778889888999999999999999999998777899999999999999999999
Q ss_pred CceeeEecC
Q psy14456 81 RGCTNVLTP 89 (93)
Q Consensus 81 ~~~~~~~~~ 89 (93)
..+++++..
T Consensus 214 ~~~v~~l~~ 222 (350)
T KOG0641|consen 214 NSCVNTLDN 222 (350)
T ss_pred cceeeeccC
Confidence 888887754
No 67
>KOG0291|consensus
Probab=99.49 E-value=6.6e-13 Score=82.13 Aligned_cols=85 Identities=21% Similarity=0.328 Sum_probs=77.1
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCc
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRG 82 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~ 82 (93)
.+|..++|.-. +++++.++++-|.+-+|+-++..-+...++|...+.++ ++|||++++||+.|+.|++||.+++-
T Consensus 308 ~~I~t~~~N~t----GDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~Sgf 383 (893)
T KOG0291|consen 308 QKILTVSFNST----GDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGF 383 (893)
T ss_pred ceeeEEEeccc----CCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCce
Confidence 56778888776 78988888777899999999888888889999999999 99999999999999999999999999
Q ss_pred eeeEecCccC
Q psy14456 83 CTNVLTPITV 92 (93)
Q Consensus 83 ~~~~~~~~~~ 92 (93)
|..+|..|+.
T Consensus 384 C~vTFteHts 393 (893)
T KOG0291|consen 384 CFVTFTEHTS 393 (893)
T ss_pred EEEEeccCCC
Confidence 9999999864
No 68
>KOG0277|consensus
Probab=99.49 E-value=5.9e-13 Score=73.78 Aligned_cols=86 Identities=21% Similarity=0.346 Sum_probs=67.6
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-Eec-CCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d~~ 79 (93)
|..-|+...|+|.. .+.++++ +.|+.+++||++.......+..|..++.+. |+. +...++|++.|+.|++||++
T Consensus 146 h~~~Iy~a~~sp~~---~nlfas~-Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir 221 (311)
T KOG0277|consen 146 HNSCIYQAAFSPHI---PNLFASA-SGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIR 221 (311)
T ss_pred CccEEEEEecCCCC---CCeEEEc-cCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehh
Confidence 66789999999984 4455554 469999999998654444488899999999 877 77899999999999999999
Q ss_pred CCc-eeeEecCcc
Q psy14456 80 TRG-CTNVLTPIT 91 (93)
Q Consensus 80 ~~~-~~~~~~~~~ 91 (93)
.-. ++..+.+|.
T Consensus 222 ~~r~pl~eL~gh~ 234 (311)
T KOG0277|consen 222 NLRTPLFELNGHG 234 (311)
T ss_pred hccccceeecCCc
Confidence 743 466665554
No 69
>KOG0276|consensus
Probab=99.49 E-value=4.7e-13 Score=81.51 Aligned_cols=86 Identities=23% Similarity=0.316 Sum_probs=76.2
Q ss_pred CCccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC-ceeEEeeccccceEEE-Eec-CCCEEEEecCCCcEEEEe
Q psy14456 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG-QAFQALSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~-~~~~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d 77 (93)
.|..-|.+++.+|. ..+++++. .|-.|++|+-+.+ .+.+.+.+|..-|..+ |+| |.+.+++++.|+++++|+
T Consensus 95 AH~DyIR~iavHPt----~P~vLtsS-DDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWs 169 (794)
T KOG0276|consen 95 AHSDYIRSIAVHPT----LPYVLTSS-DDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWS 169 (794)
T ss_pred ccccceeeeeecCC----CCeEEecC-CccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEE
Confidence 37889999999998 67777765 6999999998765 5678899999999999 999 789999999999999999
Q ss_pred CCCCceeeEecCcc
Q psy14456 78 LRTRGCTNVLTPIT 91 (93)
Q Consensus 78 ~~~~~~~~~~~~~~ 91 (93)
+.+..+..++.+|+
T Consensus 170 lgs~~~nfTl~gHe 183 (794)
T KOG0276|consen 170 LGSPHPNFTLEGHE 183 (794)
T ss_pred cCCCCCceeeeccc
Confidence 99999999998875
No 70
>KOG0640|consensus
Probab=99.49 E-value=1.9e-13 Score=77.68 Aligned_cols=84 Identities=24% Similarity=0.427 Sum_probs=72.7
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEee-ccc-cceEEE-EecCCCEEEEecCCCcEEEEeC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALS-GHS-GHVLSL-YNWGGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~-~~~-~~v~~~-~~~~~~~~~s~~~~~~i~~~d~ 78 (93)
|++.|+++.+++. +++.+++. .||.|++||--+++|+.++. .|. +.|.+. |.-++.++++.++|+.+++|++
T Consensus 260 ht~ai~~V~Ys~t----~~lYvTaS-kDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi 334 (430)
T KOG0640|consen 260 HTGAITQVRYSST----GSLYVTAS-KDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEI 334 (430)
T ss_pred cccceeEEEecCC----ccEEEEec-cCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeee
Confidence 7899999999998 67777754 79999999999999988884 455 467777 9999999999999999999999
Q ss_pred CCCceeeEecCc
Q psy14456 79 RTRGCTNVLTPI 90 (93)
Q Consensus 79 ~~~~~~~~~~~~ 90 (93)
.++.+++.+.+.
T Consensus 335 ~t~R~l~~YtGA 346 (430)
T KOG0640|consen 335 STGRMLKEYTGA 346 (430)
T ss_pred cCCceEEEEecC
Confidence 999999988653
No 71
>KOG0294|consensus
Probab=99.48 E-value=5e-13 Score=75.74 Aligned_cols=83 Identities=22% Similarity=0.357 Sum_probs=71.9
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCC--CEEEEecCCCcEEEEeC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGG--ATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~--~~~~s~~~~~~i~~~d~ 78 (93)
|.+++++++.+ +.++++++ .|.+|++||+++...+..+..|.+.++++ |.+.- +.+++|+.||.|.+|+.
T Consensus 42 H~~sitavAVs------~~~~aSGs-sDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~ 114 (362)
T KOG0294|consen 42 HAGSITALAVS------GPYVASGS-SDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRV 114 (362)
T ss_pred cccceeEEEec------ceeEeccC-CCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEc
Confidence 88999999985 45666655 59999999999999999999999999999 87754 38999999999999999
Q ss_pred CCCceeeEecCcc
Q psy14456 79 RTRGCTNVLTPIT 91 (93)
Q Consensus 79 ~~~~~~~~~~~~~ 91 (93)
..-.++..+.+|.
T Consensus 115 ~~W~~~~slK~H~ 127 (362)
T KOG0294|consen 115 GSWELLKSLKAHK 127 (362)
T ss_pred CCeEEeeeecccc
Confidence 9888888888775
No 72
>KOG0283|consensus
Probab=99.48 E-value=1.4e-13 Score=84.99 Aligned_cols=83 Identities=30% Similarity=0.526 Sum_probs=71.0
Q ss_pred CCccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC--------------------------------C--------
Q psy14456 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT--------------------------------G-------- 40 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~--------------------------------~-------- 40 (93)
.|.+.|.++.|+++ +++++++| +|+.|+||.+.. .
T Consensus 265 ah~gaIw~mKFS~D----GKyLAsaG-eD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~ 339 (712)
T KOG0283|consen 265 AHKGAIWAMKFSHD----GKYLASAG-EDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSS 339 (712)
T ss_pred ccCCcEEEEEeCCC----CceeeecC-CCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccc
Confidence 38899999999999 89999998 799999997533 0
Q ss_pred --------------------ceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEecC
Q psy14456 41 --------------------QAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLTP 89 (93)
Q Consensus 41 --------------------~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~ 89 (93)
.+++.+.+|.+.|..+ |+- .++|+++++|.++++|++....|+..|.-
T Consensus 340 ~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSK-n~fLLSSSMDKTVRLWh~~~~~CL~~F~H 408 (712)
T KOG0283|consen 340 RKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSK-NNFLLSSSMDKTVRLWHPGRKECLKVFSH 408 (712)
T ss_pred ccccCCccccCCCccccccccchhhhhccchhheeccccc-CCeeEeccccccEEeecCCCcceeeEEec
Confidence 2456778999999999 875 57889999999999999999999999853
No 73
>KOG0973|consensus
Probab=99.47 E-value=6.8e-13 Score=83.88 Aligned_cols=86 Identities=30% Similarity=0.402 Sum_probs=75.6
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC------------------CceeEEeeccccceEEE-EecCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT------------------GQAFQALSGHSGHVLSL-YNWGGA 62 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~------------------~~~~~~~~~~~~~v~~~-~~~~~~ 62 (93)
|.+.|+|+.|+|+ ++++++++ +|+.|.+|.... .+++..+.+|.+.|..+ |+|++.
T Consensus 68 h~~sv~CVR~S~d----G~~lAsGS-DD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~ 142 (942)
T KOG0973|consen 68 HDGSVNCVRFSPD----GSYLASGS-DDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDS 142 (942)
T ss_pred ccCceeEEEECCC----CCeEeecc-CcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCcc
Confidence 7899999999999 78877765 699999998762 13567788999999999 999999
Q ss_pred EEEEecCCCcEEEEeCCCCceeeEecCccC
Q psy14456 63 TVLSGSHDRTVRFWDLRTRGCTNVLTPITV 92 (93)
Q Consensus 63 ~~~s~~~~~~i~~~d~~~~~~~~~~~~~~~ 92 (93)
++++++.|..|.+|+.++...+..+.+|..
T Consensus 143 ~lvS~s~DnsViiwn~~tF~~~~vl~~H~s 172 (942)
T KOG0973|consen 143 LLVSVSLDNSVIIWNAKTFELLKVLRGHQS 172 (942)
T ss_pred EEEEecccceEEEEccccceeeeeeecccc
Confidence 999999999999999999999999988753
No 74
>KOG0292|consensus
Probab=99.47 E-value=7.1e-14 Score=87.72 Aligned_cols=83 Identities=19% Similarity=0.358 Sum_probs=77.0
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCC
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~ 81 (93)
+++|..++|+|. ..+++++= .+|.|.+||.+-+.++..|..|.++|..+ |+|...++++|+.|..|++|++.+.
T Consensus 9 SsRvKglsFHP~----rPwILtsl-HsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~r 83 (1202)
T KOG0292|consen 9 SSRVKGLSFHPK----RPWILTSL-HSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTR 83 (1202)
T ss_pred cccccceecCCC----CCEEEEee-cCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccc
Confidence 468999999998 78888865 79999999999999999999999999999 9999999999999999999999999
Q ss_pred ceeeEecCc
Q psy14456 82 GCTNVLTPI 90 (93)
Q Consensus 82 ~~~~~~~~~ 90 (93)
.|+.++.+|
T Consensus 84 rclftL~GH 92 (1202)
T KOG0292|consen 84 RCLFTLLGH 92 (1202)
T ss_pred eehhhhccc
Confidence 999888776
No 75
>KOG0306|consensus
Probab=99.47 E-value=1.9e-13 Score=84.43 Aligned_cols=85 Identities=19% Similarity=0.245 Sum_probs=78.7
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|.-+|.|++.+|+ ++.+++++ .|..|++|-++-|.|-+.+.+|...|.++ |-|+...+.+++.|+.++-||-.+
T Consensus 549 HkLPV~smDIS~D----SklivTgS-ADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~k 623 (888)
T KOG0306|consen 549 HKLPVLSMDISPD----SKLIVTGS-ADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEK 623 (888)
T ss_pred cccceeEEeccCC----cCeEEecc-CCCceEEeccccchhhhhhhcccCceeEEEEcccceeEEEecCcceEEeechhh
Confidence 6779999999999 78888877 59999999999999999999999999999 999999999999999999999999
Q ss_pred CceeeEecCcc
Q psy14456 81 RGCTNVLTPIT 91 (93)
Q Consensus 81 ~~~~~~~~~~~ 91 (93)
-.+++.+.+|.
T Consensus 624 Fe~iq~L~~H~ 634 (888)
T KOG0306|consen 624 FEEIQKLDGHH 634 (888)
T ss_pred hhhheeeccch
Confidence 98998888763
No 76
>KOG0294|consensus
Probab=99.46 E-value=1.2e-12 Score=74.19 Aligned_cols=83 Identities=29% Similarity=0.428 Sum_probs=71.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|++.|+++.|.++-+ .+.++++. .||.|.+|+.....++..+++|.+.|+.+ .+|.+.+-++.+.|+.++.||+-.
T Consensus 82 HagsitaL~F~~~~S--~shLlS~s-dDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~ 158 (362)
T KOG0294|consen 82 HAGSITALKFYPPLS--KSHLLSGS-DDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVR 158 (362)
T ss_pred cccceEEEEecCCcc--hhheeeec-CCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhc
Confidence 789999999998721 12567765 69999999999999999999999999999 999999999999999999999998
Q ss_pred CceeeEe
Q psy14456 81 RGCTNVL 87 (93)
Q Consensus 81 ~~~~~~~ 87 (93)
|......
T Consensus 159 Gr~a~v~ 165 (362)
T KOG0294|consen 159 GRVAFVL 165 (362)
T ss_pred Cccceee
Confidence 8755544
No 77
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.45 E-value=4.4e-12 Score=80.65 Aligned_cols=85 Identities=19% Similarity=0.328 Sum_probs=68.2
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-Eec-CCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d~~ 79 (93)
|++.|++++|+|.. +..+++++ .|+.|++||++++..+..+..+ ..+.++ |.+ ++..+++++.|+.+++||++
T Consensus 574 H~~~V~~l~~~p~~---~~~L~Sgs-~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~ 648 (793)
T PLN00181 574 HEKRVWSIDYSSAD---PTLLASGS-DDGSVKLWSINQGVSIGTIKTK-ANICCVQFPSESGRSLAFGSADHKVYYYDLR 648 (793)
T ss_pred CCCCEEEEEEcCCC---CCEEEEEc-CCCEEEEEECCCCcEEEEEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECC
Confidence 78899999999742 56777776 5999999999999888877654 567788 854 78999999999999999998
Q ss_pred CCc-eeeEecCcc
Q psy14456 80 TRG-CTNVLTPIT 91 (93)
Q Consensus 80 ~~~-~~~~~~~~~ 91 (93)
+.. .+..+.+|.
T Consensus 649 ~~~~~~~~~~~h~ 661 (793)
T PLN00181 649 NPKLPLCTMIGHS 661 (793)
T ss_pred CCCccceEecCCC
Confidence 765 455555553
No 78
>KOG0645|consensus
Probab=99.45 E-value=3.6e-12 Score=71.13 Aligned_cols=85 Identities=16% Similarity=0.285 Sum_probs=72.4
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC---ceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEe
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG---QAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~---~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d 77 (93)
|...|.|++|+++ +.+|++++ +|+.|.+|.+..+ .+...++.|...|..+ |+|...+|++++.|.+|++|.
T Consensus 104 HEnEVK~Vaws~s----G~~LATCS-RDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~ 178 (312)
T KOG0645|consen 104 HENEVKCVAWSAS----GNYLATCS-RDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYR 178 (312)
T ss_pred cccceeEEEEcCC----CCEEEEee-CCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEe
Confidence 7889999999999 78888876 8999999998754 4567788999999988 999999999999999999997
Q ss_pred CCC---CceeeEecCcc
Q psy14456 78 LRT---RGCTNVLTPIT 91 (93)
Q Consensus 78 ~~~---~~~~~~~~~~~ 91 (93)
-.. -.+.+++.+|+
T Consensus 179 ~~~dddW~c~~tl~g~~ 195 (312)
T KOG0645|consen 179 DEDDDDWECVQTLDGHE 195 (312)
T ss_pred ecCCCCeeEEEEecCcc
Confidence 662 25777777764
No 79
>KOG0305|consensus
Probab=99.45 E-value=6.3e-13 Score=79.73 Aligned_cols=82 Identities=22% Similarity=0.391 Sum_probs=72.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-Eec-CCCEEEEec--CCCcEEEEe
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNW-GGATVLSGS--HDRTVRFWD 77 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~-~~~~~~s~~--~~~~i~~~d 77 (93)
|+..|..+.|+++ +..++++|+ |+.+.+||......+..+..|.+.|..+ |+| ...+|++|+ .|+.|++||
T Consensus 300 H~qeVCgLkws~d----~~~lASGgn-DN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn 374 (484)
T KOG0305|consen 300 HRQEVCGLKWSPD----GNQLASGGN-DNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWN 374 (484)
T ss_pred ccceeeeeEECCC----CCeeccCCC-ccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEE
Confidence 8899999999999 788899886 9999999998888889999999999999 999 677888775 789999999
Q ss_pred CCCCceeeEec
Q psy14456 78 LRTRGCTNVLT 88 (93)
Q Consensus 78 ~~~~~~~~~~~ 88 (93)
..++..+..+.
T Consensus 375 ~~~g~~i~~vd 385 (484)
T KOG0305|consen 375 TNTGARIDSVD 385 (484)
T ss_pred cCCCcEecccc
Confidence 99988776654
No 80
>KOG0303|consensus
Probab=99.45 E-value=3.3e-13 Score=78.43 Aligned_cols=83 Identities=24% Similarity=0.347 Sum_probs=71.7
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC-------ceeEEeeccccceEEE-Eec-CCCEEEEecCCCc
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG-------QAFQALSGHSGHVLSL-YNW-GGATVLSGSHDRT 72 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~-------~~~~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~ 72 (93)
|+++|..++|.|. ....+++|++|.+|.+|++..+ ..+..+.+|...|--+ |+| -.+.|++++.|..
T Consensus 80 Ht~~vLDi~w~Pf----nD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~ 155 (472)
T KOG0303|consen 80 HTAPVLDIDWCPF----NDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNT 155 (472)
T ss_pred ccccccccccCcc----CCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCce
Confidence 8999999999998 6777888889999999998643 4567888999999988 999 4678889999999
Q ss_pred EEEEeCCCCceeeEec
Q psy14456 73 VRFWDLRTRGCTNVLT 88 (93)
Q Consensus 73 i~~~d~~~~~~~~~~~ 88 (93)
+.+||+.+|..+..+.
T Consensus 156 v~iWnv~tgeali~l~ 171 (472)
T KOG0303|consen 156 VSIWNVGTGEALITLD 171 (472)
T ss_pred EEEEeccCCceeeecC
Confidence 9999999998766654
No 81
>KOG0649|consensus
Probab=99.44 E-value=3e-12 Score=70.86 Aligned_cols=80 Identities=30% Similarity=0.524 Sum_probs=67.8
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCce
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGC 83 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~ 83 (93)
.|+++-..|.+ ++.+.++| |+.+.-||+++|+....+.+|++.+.++ --.....+++|+.||++++||.+++++
T Consensus 116 eINam~ldP~e---nSi~~AgG--D~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~ 190 (325)
T KOG0649|consen 116 EINAMWLDPSE---NSILFAGG--DGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKH 190 (325)
T ss_pred ccceeEeccCC---CcEEEecC--CeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccce
Confidence 47788888874 55566654 9999999999999999999999999998 544556788999999999999999999
Q ss_pred eeEecC
Q psy14456 84 TNVLTP 89 (93)
Q Consensus 84 ~~~~~~ 89 (93)
.+++..
T Consensus 191 v~~ie~ 196 (325)
T KOG0649|consen 191 VSMIEP 196 (325)
T ss_pred eEEecc
Confidence 988865
No 82
>KOG0639|consensus
Probab=99.43 E-value=1.3e-13 Score=82.28 Aligned_cols=75 Identities=24% Similarity=0.347 Sum_probs=67.4
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCcee
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCT 84 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~ 84 (93)
.+.++.+|+ .+..+++.+ ||.|.|||+.....+..|++|.+.+.|| .+.+|..+-||+.|.+++.||++++..+
T Consensus 512 CyALa~spD----akvcFsccs-dGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrql 586 (705)
T KOG0639|consen 512 CYALAISPD----AKVCFSCCS-DGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQL 586 (705)
T ss_pred hhhhhcCCc----cceeeeecc-CCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhh
Confidence 456788888 788888875 9999999999999999999999999999 9999999999999999999999987654
Q ss_pred e
Q psy14456 85 N 85 (93)
Q Consensus 85 ~ 85 (93)
+
T Consensus 587 q 587 (705)
T KOG0639|consen 587 Q 587 (705)
T ss_pred h
Confidence 3
No 83
>KOG0278|consensus
Probab=99.43 E-value=1.2e-12 Score=72.54 Aligned_cols=73 Identities=29% Similarity=0.537 Sum_probs=63.9
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEe-eccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCc
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQAL-SGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRG 82 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~-~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~ 82 (93)
.|.+.+.+|+ ...++++| +|..+..||..++..+..+ ++|.++|.|+ |+|+|.+.++|+.||+|++|....++
T Consensus 226 nV~SASL~P~----k~~fVaGg-ed~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~ 300 (334)
T KOG0278|consen 226 NVESASLHPK----KEFFVAGG-EDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGK 300 (334)
T ss_pred ccccccccCC----CceEEecC-cceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCC
Confidence 4666677777 66777777 6999999999999998886 8999999999 99999999999999999999987654
No 84
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.43 E-value=6.1e-12 Score=69.96 Aligned_cols=84 Identities=38% Similarity=0.603 Sum_probs=72.2
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|.+.+.++.|+|+ ++.+++++. ++.+.+||.+.+..+..+..|...+.++ |++++.++++++.++.+.+||+.+
T Consensus 176 ~~~~i~~~~~~~~----~~~l~~~~~-~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~ 250 (289)
T cd00200 176 HTGEVNSVAFSPD----GEKLLSSSS-DGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRT 250 (289)
T ss_pred CccccceEEECCC----cCEEEEecC-CCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCC
Confidence 5668999999998 667777774 9999999999988888887888899999 999988888888899999999998
Q ss_pred CceeeEecCc
Q psy14456 81 RGCTNVLTPI 90 (93)
Q Consensus 81 ~~~~~~~~~~ 90 (93)
+.....+..+
T Consensus 251 ~~~~~~~~~~ 260 (289)
T cd00200 251 GECVQTLSGH 260 (289)
T ss_pred ceeEEEcccc
Confidence 8877777654
No 85
>KOG1407|consensus
Probab=99.42 E-value=1.4e-12 Score=72.51 Aligned_cols=83 Identities=17% Similarity=0.174 Sum_probs=74.0
Q ss_pred CCccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
.|+....|+.|+|+ ++++++++ .|-.+.+||++..-|+..+.-+.-+|..+ |+.++++|++++.|..|-+=+++
T Consensus 187 AH~snCicI~f~p~----GryfA~Gs-ADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~ve 261 (313)
T KOG1407|consen 187 AHPSNCICIEFDPD----GRYFATGS-ADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVE 261 (313)
T ss_pred cCCcceEEEEECCC----CceEeecc-ccceeeccChhHhhhheeeccccCceEEEEeccCcceeeccCccceEEeEecc
Confidence 38888999999999 78888876 59999999999999999998899999999 99999999999999999988888
Q ss_pred CCceeeEec
Q psy14456 80 TRGCTNVLT 88 (93)
Q Consensus 80 ~~~~~~~~~ 88 (93)
+|..+..+.
T Consensus 262 tGd~~~eI~ 270 (313)
T KOG1407|consen 262 TGDRVWEIP 270 (313)
T ss_pred cCCeEEEee
Confidence 887665553
No 86
>KOG2394|consensus
Probab=99.42 E-value=6.9e-13 Score=79.55 Aligned_cols=83 Identities=18% Similarity=0.332 Sum_probs=72.8
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCC
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~ 81 (93)
++.|...+|+|+ ++.+++.+ +||.++|+|..+.+.+..++.+-+...|+ |+||+.++++|+.|-.+.||.+..+
T Consensus 290 ~g~in~f~FS~D----G~~LA~VS-qDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~er 364 (636)
T KOG2394|consen 290 EGSINEFAFSPD----GKYLATVS-QDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEER 364 (636)
T ss_pred cccccceeEcCC----CceEEEEe-cCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccc
Confidence 467888999998 88888887 89999999999999888888889999999 9999999999999999999999887
Q ss_pred ceeeEecCc
Q psy14456 82 GCTNVLTPI 90 (93)
Q Consensus 82 ~~~~~~~~~ 90 (93)
+.+..=.+|
T Consensus 365 RVVARGqGH 373 (636)
T KOG2394|consen 365 RVVARGQGH 373 (636)
T ss_pred eEEEecccc
Confidence 765544433
No 87
>KOG0296|consensus
Probab=99.42 E-value=1.4e-11 Score=71.03 Aligned_cols=87 Identities=24% Similarity=0.379 Sum_probs=76.3
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|...|+++.|+-+ +.++++++ .+|.|++|...++.....+..--+.+.-+ |+|.+..++.|+.|+.+-+|.+.+
T Consensus 105 HKDSVt~~~Fshd----gtlLATGd-msG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~ 179 (399)
T KOG0296|consen 105 HKDSVTCCSFSHD----GTLLATGD-MSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPS 179 (399)
T ss_pred CCCceEEEEEccC----ceEEEecC-CCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCC
Confidence 7899999999998 78888877 59999999999998888876556677778 999999999999999999999999
Q ss_pred CceeeEecCccCC
Q psy14456 81 RGCTNVLTPITVP 93 (93)
Q Consensus 81 ~~~~~~~~~~~~~ 93 (93)
+...+.+.+|..|
T Consensus 180 ~~~~kv~~Gh~~~ 192 (399)
T KOG0296|consen 180 QALCKVMSGHNSP 192 (399)
T ss_pred cceeeEecCCCCC
Confidence 8888888887654
No 88
>KOG0299|consensus
Probab=99.41 E-value=7e-13 Score=77.97 Aligned_cols=85 Identities=27% Similarity=0.470 Sum_probs=76.4
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|...+.+++.+++ +++++++| +|..+.||+.++.+.++.+.+|.+.|.++ |-....-+++++.|+.+++|++..
T Consensus 201 h~keil~~avS~D----gkylatgg-~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~ 275 (479)
T KOG0299|consen 201 HVKEILTLAVSSD----GKYLATGG-RDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQ 275 (479)
T ss_pred ccceeEEEEEcCC----CcEEEecC-CCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhH
Confidence 6788999999999 89999988 79999999999999999999999999999 888888899999999999999988
Q ss_pred CceeeEecCcc
Q psy14456 81 RGCTNVLTPIT 91 (93)
Q Consensus 81 ~~~~~~~~~~~ 91 (93)
...+.++++|.
T Consensus 276 ~s~vetlyGHq 286 (479)
T KOG0299|consen 276 LSYVETLYGHQ 286 (479)
T ss_pred hHHHHHHhCCc
Confidence 77666666653
No 89
>KOG0302|consensus
Probab=99.41 E-value=2.3e-12 Score=74.56 Aligned_cols=75 Identities=23% Similarity=0.448 Sum_probs=62.3
Q ss_pred CCccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCC---CCceeEEeeccccceEEE-Eec-CCCEEEEecCCCcEEE
Q psy14456 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCA---TGQAFQALSGHSGHVLSL-YNW-GGATVLSGSHDRTVRF 75 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~---~~~~~~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~ 75 (93)
.|.+-|+.++|+.. ..++++++ .||.+++||++ .++++..++-|+.+|+++ |+| +...++.++.|.++.+
T Consensus 300 Ah~sDVNVISWnr~----~~lLasG~-DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~Qiti 374 (440)
T KOG0302|consen 300 AHNSDVNVISWNRR----EPLLASGG-DDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITI 374 (440)
T ss_pred ccCCceeeEEccCC----cceeeecC-CCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEE
Confidence 37788999999887 45555555 69999999987 456788999999999999 999 5667888889999999
Q ss_pred EeCCC
Q psy14456 76 WDLRT 80 (93)
Q Consensus 76 ~d~~~ 80 (93)
||+..
T Consensus 375 WDlsv 379 (440)
T KOG0302|consen 375 WDLSV 379 (440)
T ss_pred EEeec
Confidence 99864
No 90
>KOG1539|consensus
Probab=99.41 E-value=2.4e-12 Score=80.27 Aligned_cols=83 Identities=28% Similarity=0.421 Sum_probs=69.4
Q ss_pred CCccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC----------------------------------------
Q psy14456 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG---------------------------------------- 40 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~---------------------------------------- 40 (93)
.|.++|+.++...- ++.++++|. +|.+.+||....
T Consensus 491 ah~~~V~gla~D~~----n~~~vsa~~-~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t 565 (910)
T KOG1539|consen 491 AHKGEVTGLAVDGT----NRLLVSAGA-DGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVT 565 (910)
T ss_pred cccCceeEEEecCC----CceEEEccC-cceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchh
Confidence 37889999998766 677888885 999999987532
Q ss_pred -ceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEec
Q psy14456 41 -QAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 41 -~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~ 88 (93)
+.+..+.+|.+.++++ |+|+++++++++.|++|++||+.++.++-.+.
T Consensus 566 ~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~ 615 (910)
T KOG1539|consen 566 RKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLL 615 (910)
T ss_pred hhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEe
Confidence 2345667899999999 99999999999999999999999998776664
No 91
>KOG1445|consensus
Probab=99.41 E-value=3.3e-13 Score=82.66 Aligned_cols=78 Identities=21% Similarity=0.394 Sum_probs=69.2
Q ss_pred CCccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
+|...|+.+.|+|-. .+.++++ +.|-+|++||+..+.....+.+|++.|..+ |+|+|+.+++.+.|+.+++++.+
T Consensus 675 ~h~eKI~slRfHPLA---advLa~a-syd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Pr 750 (1012)
T KOG1445|consen 675 IHGEKITSLRFHPLA---ADVLAVA-SYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPR 750 (1012)
T ss_pred cccceEEEEEecchh---hhHhhhh-hccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCC
Confidence 588999999999973 4445554 469999999999999999999999999999 99999999999999999999988
Q ss_pred CCc
Q psy14456 80 TRG 82 (93)
Q Consensus 80 ~~~ 82 (93)
++.
T Consensus 751 s~e 753 (1012)
T KOG1445|consen 751 SRE 753 (1012)
T ss_pred CCC
Confidence 764
No 92
>KOG0973|consensus
Probab=99.41 E-value=2.1e-12 Score=81.73 Aligned_cols=83 Identities=30% Similarity=0.422 Sum_probs=73.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|.+.|.++.|+|+ ..++++++. |++|.+|+..+...+..+.+|.+.|..+ |.|-|+++++.+.|+++++|....
T Consensus 128 H~~DV~Dv~Wsp~----~~~lvS~s~-DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~d 202 (942)
T KOG0973|consen 128 HDSDVLDVNWSPD----DSLLVSVSL-DNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSD 202 (942)
T ss_pred CCCccceeccCCC----ccEEEEecc-cceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCceEEEEEccc
Confidence 7889999999998 788888875 9999999999999999999999999999 999999999999999999999776
Q ss_pred CceeeEecC
Q psy14456 81 RGCTNVLTP 89 (93)
Q Consensus 81 ~~~~~~~~~ 89 (93)
-...+.+..
T Consensus 203 w~i~k~It~ 211 (942)
T KOG0973|consen 203 WGIEKSITK 211 (942)
T ss_pred ceeeEeecc
Confidence 555555443
No 93
>KOG1034|consensus
Probab=99.40 E-value=4.9e-12 Score=72.21 Aligned_cols=87 Identities=29% Similarity=0.487 Sum_probs=74.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-Eec-CCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d~~ 79 (93)
|....+.++|+-+......+++++| .-|.|++.|+.++++...+.+|...|+.+ +.| +.+++++++.|..+++|+++
T Consensus 88 ~~Esfytcsw~yd~~~~~p~la~~G-~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~ 166 (385)
T KOG1034|consen 88 HDESFYTCSWSYDSNTGNPFLAAGG-YLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQ 166 (385)
T ss_pred CCcceEEEEEEecCCCCCeeEEeec-ceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEecc
Confidence 4456778888877543355677777 69999999999999999999999999999 999 57899999999999999999
Q ss_pred CCceeeEecC
Q psy14456 80 TRGCTNVLTP 89 (93)
Q Consensus 80 ~~~~~~~~~~ 89 (93)
+..|+..|.+
T Consensus 167 ~~~Cv~VfGG 176 (385)
T KOG1034|consen 167 TDVCVAVFGG 176 (385)
T ss_pred CCeEEEEecc
Confidence 9999998865
No 94
>KOG0289|consensus
Probab=99.39 E-value=8.7e-12 Score=73.32 Aligned_cols=87 Identities=21% Similarity=0.345 Sum_probs=75.5
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccc--cceEEE-EecCCCEEEEecCCCcEEEEeC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHS--GHVLSL-YNWGGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~--~~v~~~-~~~~~~~~~s~~~~~~i~~~d~ 78 (93)
|.++|+.+..+|. +.+++++.+ |+...+.|.+++..+....... -.+.+. |+|||..+.+|..|+.+++||+
T Consensus 302 h~~~V~~ls~h~t----geYllsAs~-d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdl 376 (506)
T KOG0289|consen 302 HEEPVTGLSLHPT----GEYLLSASN-DGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDL 376 (506)
T ss_pred ccccceeeeeccC----CcEEEEecC-CceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEc
Confidence 7899999999999 899999875 9999999999999876654322 246788 9999999999999999999999
Q ss_pred CCCceeeEecCccCC
Q psy14456 79 RTRGCTNVLTPITVP 93 (93)
Q Consensus 79 ~~~~~~~~~~~~~~~ 93 (93)
.++.....|.+|+.|
T Consensus 377 ks~~~~a~Fpght~~ 391 (506)
T KOG0289|consen 377 KSQTNVAKFPGHTGP 391 (506)
T ss_pred CCccccccCCCCCCc
Confidence 999999999888765
No 95
>KOG0270|consensus
Probab=99.39 E-value=7.8e-13 Score=77.51 Aligned_cols=75 Identities=25% Similarity=0.361 Sum_probs=66.5
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-Eec-CCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d~~ 79 (93)
|+..|..++|... .+.++++|+.|.+|.+||+.++++...+..|...|.++ |++ .+..+++|+.|+++.+.|.|
T Consensus 242 HTdavl~Ls~n~~----~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R 317 (463)
T KOG0270|consen 242 HTDAVLALSWNRN----FRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCR 317 (463)
T ss_pred chHHHHHHHhccc----cceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeecc
Confidence 7788888988877 56666667789999999999999999999899999999 988 67899999999999999999
Q ss_pred C
Q psy14456 80 T 80 (93)
Q Consensus 80 ~ 80 (93)
.
T Consensus 318 ~ 318 (463)
T KOG0270|consen 318 D 318 (463)
T ss_pred C
Confidence 3
No 96
>KOG0267|consensus
Probab=99.39 E-value=1.9e-13 Score=84.04 Aligned_cols=85 Identities=26% Similarity=0.520 Sum_probs=75.2
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|.++|.++.|++. .. ++++|+.+|.|++||++....+.++.+|...+..+ |+|.+.+.++++.|..+.+||++.
T Consensus 69 hespIeSl~f~~~----E~-LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk 143 (825)
T KOG0267|consen 69 HESPIESLTFDTS----ER-LLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRK 143 (825)
T ss_pred cCCcceeeecCcc----hh-hhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhc
Confidence 8899999999987 34 44445579999999999999999999999999999 999999999999999999999998
Q ss_pred CceeeEecCcc
Q psy14456 81 RGCTNVLTPIT 91 (93)
Q Consensus 81 ~~~~~~~~~~~ 91 (93)
..|...+..|+
T Consensus 144 ~Gc~~~~~s~~ 154 (825)
T KOG0267|consen 144 KGCSHTYKSHT 154 (825)
T ss_pred cCceeeecCCc
Confidence 88888887653
No 97
>KOG0640|consensus
Probab=99.39 E-value=2.2e-12 Score=73.49 Aligned_cols=81 Identities=22% Similarity=0.459 Sum_probs=70.2
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEe---eccccceEEE-EecCCCEEEEecCCCcEEEEeC
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQAL---SGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~---~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~ 78 (93)
..+|.+++|+|. +.+++.+. +...+++||+++-++.... ..|++.|+++ +++.+++.++++.||.|++||-
T Consensus 216 ~~~vrsiSfHPs----GefllvgT-dHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDG 290 (430)
T KOG0640|consen 216 TEPVRSISFHPS----GEFLLVGT-DHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDG 290 (430)
T ss_pred cceeeeEeecCC----CceEEEec-CCCceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeecc
Confidence 357999999998 78777754 6999999999999886543 4688999999 9999999999999999999999
Q ss_pred CCCceeeEec
Q psy14456 79 RTRGCTNVLT 88 (93)
Q Consensus 79 ~~~~~~~~~~ 88 (93)
-++.|+.+|.
T Consensus 291 VS~rCv~t~~ 300 (430)
T KOG0640|consen 291 VSNRCVRTIG 300 (430)
T ss_pred ccHHHHHHHH
Confidence 9888887774
No 98
>KOG1446|consensus
Probab=99.39 E-value=2.1e-11 Score=68.98 Aligned_cols=80 Identities=35% Similarity=0.591 Sum_probs=66.4
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC------------------------------------------
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG------------------------------------------ 40 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~------------------------------------------ 40 (93)
.+.|+++.|+++ +..++++. .|-.+++||...+
T Consensus 14 ~~~i~sl~fs~~----G~~litss-~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~ 88 (311)
T KOG1446|consen 14 NGKINSLDFSDD----GLLLITSS-EDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLH 88 (311)
T ss_pred CCceeEEEecCC----CCEEEEec-CCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEee
Confidence 467899999998 77888865 5889999987533
Q ss_pred --ceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEe
Q psy14456 41 --QAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVL 87 (93)
Q Consensus 41 --~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~ 87 (93)
+.+.-+.||...|..+ .+|.+..+++++.|+++++||++...|+-.+
T Consensus 89 dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l 138 (311)
T KOG1446|consen 89 DNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLL 138 (311)
T ss_pred cCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEE
Confidence 3566778999999999 9998899999999999999999977665544
No 99
>KOG0772|consensus
Probab=99.38 E-value=9.3e-13 Score=78.77 Aligned_cols=81 Identities=26% Similarity=0.407 Sum_probs=63.5
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCc--e-eEEeecccc--ceEEE-EecCCCEEEEecCCCcEEEEeC
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQ--A-FQALSGHSG--HVLSL-YNWGGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~--~-~~~~~~~~~--~v~~~-~~~~~~~~~s~~~~~~i~~~d~ 78 (93)
+++.++|+|+ +.+|++++ .||.|.+|+....- . .+.-.+|.. .|.++ |+++++.|++.+.|..+++||+
T Consensus 319 ~~tsC~~nrd----g~~iAagc-~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDL 393 (641)
T KOG0772|consen 319 PVTSCAWNRD----GKLIAAGC-LDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDL 393 (641)
T ss_pred CceeeecCCC----cchhhhcc-cCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeec
Confidence 5789999999 77766655 69999999975432 2 233356776 89999 9999999999999999999999
Q ss_pred CCC-ceeeEecCc
Q psy14456 79 RTR-GCTNVLTPI 90 (93)
Q Consensus 79 ~~~-~~~~~~~~~ 90 (93)
++. +++.+..+.
T Consensus 394 rq~kkpL~~~tgL 406 (641)
T KOG0772|consen 394 RQFKKPLNVRTGL 406 (641)
T ss_pred cccccchhhhcCC
Confidence 974 456655544
No 100
>KOG0318|consensus
Probab=99.38 E-value=7e-12 Score=75.12 Aligned_cols=77 Identities=19% Similarity=0.334 Sum_probs=66.7
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCcee-EEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAF-QALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
|+++|++++|+|+ +.+++++. ..+.+.+||..+.+.. ..+.=|++.|.++ |+|+...++||+.|-.+.+|++.
T Consensus 486 h~a~iT~vaySpd----~~yla~~D-a~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~ 560 (603)
T KOG0318|consen 486 HRAAITDVAYSPD----GAYLAAGD-ASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVK 560 (603)
T ss_pred ccCCceEEEECCC----CcEEEEec-cCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEcc
Confidence 7899999999999 78888776 5999999999988763 2334499999999 99999999999999999999998
Q ss_pred CCce
Q psy14456 80 TRGC 83 (93)
Q Consensus 80 ~~~~ 83 (93)
....
T Consensus 561 kP~~ 564 (603)
T KOG0318|consen 561 KPAK 564 (603)
T ss_pred Chhh
Confidence 7543
No 101
>KOG1009|consensus
Probab=99.38 E-value=5.3e-12 Score=73.51 Aligned_cols=85 Identities=28% Similarity=0.442 Sum_probs=72.9
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCC--------C--------CceeEEeeccccceEEE-EecCCCEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCA--------T--------GQAFQALSGHSGHVLSL-YNWGGATV 64 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~--------~--------~~~~~~~~~~~~~v~~~-~~~~~~~~ 64 (93)
|+.+|+++.|+|+ ++++++++ .++.+.+|... + ......+.+|...+..+ |+++++.+
T Consensus 64 H~~aVN~vRf~p~----gelLASg~-D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l 138 (434)
T KOG1009|consen 64 HTRAVNVVRFSPD----GELLASGG-DGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFL 138 (434)
T ss_pred CcceeEEEEEcCC----cCeeeecC-CCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCcee
Confidence 8899999999999 78888887 59999999765 2 12345667899999999 99999999
Q ss_pred EEecCCCcEEEEeCCCCceeeEecCcc
Q psy14456 65 LSGSHDRTVRFWDLRTRGCTNVLTPIT 91 (93)
Q Consensus 65 ~s~~~~~~i~~~d~~~~~~~~~~~~~~ 91 (93)
++++.|..+++||+..|+....+..|.
T Consensus 139 ~s~s~dns~~l~Dv~~G~l~~~~~dh~ 165 (434)
T KOG1009|consen 139 VSGSVDNSVRLWDVHAGQLLAILDDHE 165 (434)
T ss_pred eeeeccceEEEEEeccceeEeeccccc
Confidence 999999999999999999888877653
No 102
>KOG0293|consensus
Probab=99.37 E-value=1.7e-12 Score=76.04 Aligned_cols=62 Identities=31% Similarity=0.504 Sum_probs=56.7
Q ss_pred cceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-Eec-CCCEEEEecCCCcEEEEeCCC
Q psy14456 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 19 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d~~~ 80 (93)
.+.++++|++|+.|++|+..++.++..+.||...++++ |+| +...+++++.|++|++|....
T Consensus 451 ~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~ 514 (519)
T KOG0293|consen 451 NDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSD 514 (519)
T ss_pred CcceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence 45788889999999999999999999999999999999 999 678899999999999997653
No 103
>KOG0269|consensus
Probab=99.35 E-value=4.7e-12 Score=78.47 Aligned_cols=86 Identities=20% Similarity=0.229 Sum_probs=64.9
Q ss_pred CCccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEee-ccccceEEE-EecC-CCEEEEec--CCCcEEE
Q psy14456 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALS-GHSGHVLSL-YNWG-GATVLSGS--HDRTVRF 75 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~-~~~~~v~~~-~~~~-~~~~~s~~--~~~~i~~ 75 (93)
.|.++|.|+.|+|+ +.+++++| +|+++++|+..+.+...... .-..++..+ |-|. ...|++++ .|..|++
T Consensus 218 AH~GpV~c~nwhPn----r~~lATGG-RDK~vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~V 292 (839)
T KOG0269|consen 218 AHNGPVLCLNWHPN----REWLATGG-RDKMVKIWDMTDSRAKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHV 292 (839)
T ss_pred cccCceEEEeecCC----CceeeecC-CCccEEEEeccCCCccceeEEeecceeeeeeeccCccchhhhhhccccceEEE
Confidence 48999999999998 88999988 89999999998665433222 235678888 9884 45677776 5789999
Q ss_pred EeCCCC-ceeeEecCcc
Q psy14456 76 WDLRTR-GCTNVLTPIT 91 (93)
Q Consensus 76 ~d~~~~-~~~~~~~~~~ 91 (93)
||++.. -+..+|..|+
T Consensus 293 WDvrRPYIP~~t~~eH~ 309 (839)
T KOG0269|consen 293 WDVRRPYIPYATFLEHT 309 (839)
T ss_pred EeeccccccceeeeccC
Confidence 999853 4455555543
No 104
>KOG0293|consensus
Probab=99.35 E-value=7.1e-12 Score=73.48 Aligned_cols=82 Identities=20% Similarity=0.269 Sum_probs=71.5
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC---ceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEe
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG---QAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~---~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d 77 (93)
|+..|.-+.|+++ +++++++. .|.+..+|.+... +..+++.+|..+|..+ |+|+.+++++|+.+..+.+||
T Consensus 223 htdEVWfl~FS~n----GkyLAsaS-kD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwD 297 (519)
T KOG0293|consen 223 HTDEVWFLQFSHN----GKYLASAS-KDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWD 297 (519)
T ss_pred CCCcEEEEEEcCC----CeeEeecc-CCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeecc
Confidence 7899999999998 78888876 6999999987544 3467889999999999 999999999999999999999
Q ss_pred CCCCceeeEec
Q psy14456 78 LRTRGCTNVLT 88 (93)
Q Consensus 78 ~~~~~~~~~~~ 88 (93)
..+|.....+.
T Consensus 298 v~tgd~~~~y~ 308 (519)
T KOG0293|consen 298 VDTGDLRHLYP 308 (519)
T ss_pred CCcchhhhhcc
Confidence 99998776654
No 105
>KOG0305|consensus
Probab=99.33 E-value=5.7e-12 Score=75.71 Aligned_cols=84 Identities=29% Similarity=0.379 Sum_probs=73.4
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEE-eeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQA-LSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~-~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
|.++|.+++|. ..++++|++++.|..+|++..+.... +.+|...|..+ |++++..+++|+.|..+.+||..
T Consensus 259 h~~rvg~laW~-------~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~ 331 (484)
T KOG0305|consen 259 HASRVGSLAWN-------SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGL 331 (484)
T ss_pred cCceeEEEecc-------CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCC
Confidence 78899999996 34677788999999999998766544 88999999999 99999999999999999999998
Q ss_pred CCceeeEecCccC
Q psy14456 80 TRGCTNVLTPITV 92 (93)
Q Consensus 80 ~~~~~~~~~~~~~ 92 (93)
.......+..|..
T Consensus 332 ~~~p~~~~~~H~a 344 (484)
T KOG0305|consen 332 SPEPKFTFTEHTA 344 (484)
T ss_pred CccccEEEeccce
Confidence 8888888887754
No 106
>KOG0290|consensus
Probab=99.33 E-value=1.5e-11 Score=69.48 Aligned_cols=76 Identities=21% Similarity=0.389 Sum_probs=64.1
Q ss_pred CCccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC----------------------------------------
Q psy14456 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG---------------------------------------- 40 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~---------------------------------------- 40 (93)
.|...|.+++|..++ .+.|++.| .||.+|++|++..
T Consensus 194 AHDKEV~DIaf~~~s---~~~FASvg-aDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~ 269 (364)
T KOG0290|consen 194 AHDKEVYDIAFLKGS---RDVFASVG-ADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVV 269 (364)
T ss_pred ecCcceeEEEeccCc---cceEEEec-CCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEE
Confidence 378899999999864 67788888 5999999998632
Q ss_pred --------ceeEEeeccccceEEE-Eec-CCCEEEEecCCCcEEEEeCCC
Q psy14456 41 --------QAFQALSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 41 --------~~~~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d~~~ 80 (93)
..+..+.+|.+.|+.+ |.| ....+++++.|.+..+||+.+
T Consensus 270 iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q 319 (364)
T KOG0290|consen 270 ILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQ 319 (364)
T ss_pred EEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEeccc
Confidence 1356778899999999 999 578999999999999999975
No 107
>KOG4283|consensus
Probab=99.33 E-value=2.3e-11 Score=69.00 Aligned_cols=86 Identities=31% Similarity=0.539 Sum_probs=70.9
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCC-EEEEecCCCcEEEEeCCCC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGA-TVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~-~~~s~~~~~~i~~~d~~~~ 81 (93)
+.|+.-+++|-.. ..-++++|.++..|++-|+.+|..-+.+.+|...|..+ |+|... .+++++.|+.+++||++..
T Consensus 144 ~~VYshamSp~a~--sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRra 221 (397)
T KOG4283|consen 144 GKVYSHAMSPMAM--SHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRA 221 (397)
T ss_pred ceeehhhcChhhh--cceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecc
Confidence 5566777777531 24577778889999999999999999999999999999 999655 5679999999999999976
Q ss_pred -ceeeEecCcc
Q psy14456 82 -GCTNVLTPIT 91 (93)
Q Consensus 82 -~~~~~~~~~~ 91 (93)
.|.+.+..|.
T Consensus 222 sgcf~~lD~hn 232 (397)
T KOG4283|consen 222 SGCFRVLDQHN 232 (397)
T ss_pred cceeEEeeccc
Confidence 6787776654
No 108
>KOG4283|consensus
Probab=99.32 E-value=1.3e-11 Score=69.95 Aligned_cols=77 Identities=23% Similarity=0.391 Sum_probs=64.6
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC-ceeEEe--------------eccccceEEE-EecCCCEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG-QAFQAL--------------SGHSGHVLSL-YNWGGATVL 65 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~-~~~~~~--------------~~~~~~v~~~-~~~~~~~~~ 65 (93)
|++.|.++.|+|. .++++++|+.||.+++||++.. .+...+ ..|.+.+..+ |..++.+++
T Consensus 187 Hr~~vlaV~Wsp~----~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~ 262 (397)
T KOG4283|consen 187 HRDGVLAVEWSPS----SEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLA 262 (397)
T ss_pred ccCceEEEEeccC----ceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhh
Confidence 7889999999998 8888888888999999999754 222222 3467788899 999999999
Q ss_pred EecCCCcEEEEeCCCCc
Q psy14456 66 SGSHDRTVRFWDLRTRG 82 (93)
Q Consensus 66 s~~~~~~i~~~d~~~~~ 82 (93)
+++.|..+++|+..+|.
T Consensus 263 ~~gtd~r~r~wn~~~G~ 279 (397)
T KOG4283|consen 263 SCGTDDRIRVWNMESGR 279 (397)
T ss_pred hccCccceEEeecccCc
Confidence 99999999999998875
No 109
>KOG0646|consensus
Probab=99.30 E-value=1.4e-11 Score=72.73 Aligned_cols=85 Identities=21% Similarity=0.370 Sum_probs=72.2
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC-
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT- 80 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~- 80 (93)
.++|.+++-+|. +.++++++ ..+.+.+|.+.+|..+..+.+|...|+++ |+-++.+++|++.|+.|.+|++-.
T Consensus 81 Pg~v~al~s~n~----G~~l~ag~-i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~l 155 (476)
T KOG0646|consen 81 PGPVHALASSNL----GYFLLAGT-ISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDL 155 (476)
T ss_pred ccceeeeecCCC----ceEEEeec-ccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEee
Confidence 578999999988 78888776 59999999999999999999999999999 999999999999999999997542
Q ss_pred --------CceeeEecCccC
Q psy14456 81 --------RGCTNVLTPITV 92 (93)
Q Consensus 81 --------~~~~~~~~~~~~ 92 (93)
-.++..|..|+.
T Consensus 156 v~a~~~~~~~p~~~f~~Htl 175 (476)
T KOG0646|consen 156 VSADNDHSVKPLHIFSDHTL 175 (476)
T ss_pred cccccCCCccceeeeccCcc
Confidence 235566665554
No 110
>KOG0267|consensus
Probab=99.30 E-value=1.1e-11 Score=76.64 Aligned_cols=85 Identities=22% Similarity=0.292 Sum_probs=74.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|...+..++|+|- +.++ ++|+.|+.+.+||.+...|.+.+.+|...+..+ |.|+|.+++.++.|..+.+||...
T Consensus 111 h~~~~~sv~f~P~----~~~~-a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~a 185 (825)
T KOG0267|consen 111 HLLNITSVDFHPY----GEFF-ASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTA 185 (825)
T ss_pred cccCcceeeeccc----eEEe-ccccccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCCcceeeeecccc
Confidence 5678889999997 5555 666779999999999888999999999999999 999999999999999999999999
Q ss_pred CceeeEecCcc
Q psy14456 81 RGCTNVLTPIT 91 (93)
Q Consensus 81 ~~~~~~~~~~~ 91 (93)
|+....|..|+
T Consensus 186 gk~~~ef~~~e 196 (825)
T KOG0267|consen 186 GKLSKEFKSHE 196 (825)
T ss_pred ccccccccccc
Confidence 98888877554
No 111
>KOG0278|consensus
Probab=99.29 E-value=4e-12 Score=70.57 Aligned_cols=82 Identities=33% Similarity=0.547 Sum_probs=70.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCce-eEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQA-FQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
|.--|..++|+.+ .+.++++| .+..+++||++.... ...+.+|.+.|..+ |....+.+++...|+.+++||.+
T Consensus 99 hkhivk~~af~~d----s~~lltgg-~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~r 173 (334)
T KOG0278|consen 99 HKHIVKAVAFSQD----SNYLLTGG-QEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHR 173 (334)
T ss_pred hhheeeeEEeccc----chhhhccc-hHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEec
Confidence 4556889999998 78899988 599999999986643 56788999999999 98888888888999999999999
Q ss_pred CCceeeEec
Q psy14456 80 TRGCTNVLT 88 (93)
Q Consensus 80 ~~~~~~~~~ 88 (93)
++...+.+.
T Consensus 174 Tgt~v~sL~ 182 (334)
T KOG0278|consen 174 TGTEVQSLE 182 (334)
T ss_pred cCcEEEEEe
Confidence 998887775
No 112
>KOG0306|consensus
Probab=99.28 E-value=4.4e-11 Score=74.34 Aligned_cols=84 Identities=26% Similarity=0.307 Sum_probs=75.7
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCC
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~ 81 (93)
+..|.|+.++|+ +.+++.+= -|.++++|-+++.+-...+.||.-+|.++ .+|+..+++||+.|+.+++|-+.=|
T Consensus 508 ~ddvL~v~~Spd----gk~LaVsL-LdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFG 582 (888)
T KOG0306|consen 508 EDDVLCVSVSPD----GKLLAVSL-LDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFG 582 (888)
T ss_pred cccEEEEEEcCC----CcEEEEEe-ccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccc
Confidence 357899999999 67766654 69999999999999888999999999999 9999999999999999999999989
Q ss_pred ceeeEecCcc
Q psy14456 82 GCTNVLTPIT 91 (93)
Q Consensus 82 ~~~~~~~~~~ 91 (93)
.|-+.|.+|.
T Consensus 583 DCHKS~fAHd 592 (888)
T KOG0306|consen 583 DCHKSFFAHD 592 (888)
T ss_pred hhhhhhhccc
Confidence 9999888874
No 113
>KOG0313|consensus
Probab=99.27 E-value=3.6e-11 Score=69.71 Aligned_cols=73 Identities=23% Similarity=0.409 Sum_probs=64.1
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCc-eeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQ-AFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~-~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
|++.|..+.|+|. ..+++.+|+.|+++++||+++.+ ++..+.+|...+.++ |+. +.++++|+.|.+++++...
T Consensus 344 H~nwVssvkwsp~----~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~~-~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 344 HKNWVSSVKWSPT----NEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWNE-GGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred chhhhhheecCCC----CceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEeccC-CceEEeccCcceEEEeccc
Confidence 7889999999998 67777778889999999999877 899999999999999 764 5689999999999998654
No 114
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.27 E-value=2.2e-10 Score=62.30 Aligned_cols=78 Identities=15% Similarity=0.353 Sum_probs=59.0
Q ss_pred cceeEEEEEecCCCCcceE-EEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCC---CcEEEEeC
Q psy14456 4 GTVRDVCFIEDTSNKSSLL-ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHD---RTVRFWDL 78 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~-~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~---~~i~~~d~ 78 (93)
++|.+++|+|+ ++.+ +..|..+..+.+||++ +..+..+. ...+..+ |+|+|++++.++.+ |.+.+||.
T Consensus 60 ~~I~~~~WsP~----g~~favi~g~~~~~v~lyd~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~ 132 (194)
T PF08662_consen 60 GPIHDVAWSPN----GNEFAVIYGSMPAKVTLYDVK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDV 132 (194)
T ss_pred CceEEEEECcC----CCEEEEEEccCCcccEEEcCc-ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEEC
Confidence 57999999999 4554 4546557899999996 55555553 4566778 99999999987643 67999999
Q ss_pred CCCceeeEec
Q psy14456 79 RTRGCTNVLT 88 (93)
Q Consensus 79 ~~~~~~~~~~ 88 (93)
++.+.+..+.
T Consensus 133 ~~~~~i~~~~ 142 (194)
T PF08662_consen 133 RKKKKISTFE 142 (194)
T ss_pred CCCEEeeccc
Confidence 9877766553
No 115
>KOG1036|consensus
Probab=99.25 E-value=1.5e-10 Score=65.59 Aligned_cols=73 Identities=32% Similarity=0.632 Sum_probs=62.5
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|++++.+++|.++ ..+++++. ||.|+.+|++++.... +..|...+.++ +.+....+++++.|++|++||.+.
T Consensus 53 ~~~plL~c~F~d~-----~~~~~G~~-dg~vr~~Dln~~~~~~-igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~ 125 (323)
T KOG1036|consen 53 HGAPLLDCAFADE-----STIVTGGL-DGQVRRYDLNTGNEDQ-IGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRN 125 (323)
T ss_pred cCCceeeeeccCC-----ceEEEecc-CceEEEEEecCCccee-eccCCCceEEEEeeccCCeEEEcccCccEEEEeccc
Confidence 7889999999875 45677775 9999999999887644 45699999999 888888899999999999999995
Q ss_pred C
Q psy14456 81 R 81 (93)
Q Consensus 81 ~ 81 (93)
.
T Consensus 126 ~ 126 (323)
T KOG1036|consen 126 K 126 (323)
T ss_pred c
Confidence 3
No 116
>KOG1007|consensus
Probab=99.24 E-value=5.3e-11 Score=67.31 Aligned_cols=75 Identities=28% Similarity=0.389 Sum_probs=63.7
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC-ceeEEeeccccceEEE-Eec-CCCEEEEecCCCcEEEEeC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG-QAFQALSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~-~~~~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d~ 78 (93)
|...|..++|.|+. ...++++| .||.|++||.+.. .+++.+.+|...+.++ |+| ..+++++++.|..+.+|..
T Consensus 213 Hgq~vrdlDfNpnk---q~~lvt~g-DdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca 288 (370)
T KOG1007|consen 213 HGQRVRDLDFNPNK---QHILVTCG-DDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCA 288 (370)
T ss_pred hcceeeeccCCCCc---eEEEEEcC-CCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEec
Confidence 67789999999983 45667777 5999999998754 5688899999999999 999 5788999999999999976
Q ss_pred CC
Q psy14456 79 RT 80 (93)
Q Consensus 79 ~~ 80 (93)
.+
T Consensus 289 ~s 290 (370)
T KOG1007|consen 289 SS 290 (370)
T ss_pred cc
Confidence 64
No 117
>KOG0288|consensus
Probab=99.24 E-value=4.5e-12 Score=74.01 Aligned_cols=81 Identities=27% Similarity=0.536 Sum_probs=70.9
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCc
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRG 82 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~ 82 (93)
+.|+.++|.++ +..+++++. |+.+++|++...+...++.+|++.++++ |.....-+++++.|.+++.||+++..
T Consensus 220 g~it~~d~d~~----~~~~iAas~-d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~ 294 (459)
T KOG0288|consen 220 GNITSIDFDSD----NKHVIAASN-DKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAY 294 (459)
T ss_pred CCcceeeecCC----CceEEeecC-CCceeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhh
Confidence 56999999988 677788775 9999999999999999999999999999 87766559999999999999999988
Q ss_pred eeeEecC
Q psy14456 83 CTNVLTP 89 (93)
Q Consensus 83 ~~~~~~~ 89 (93)
|.+++..
T Consensus 295 C~kt~l~ 301 (459)
T KOG0288|consen 295 CSKTVLP 301 (459)
T ss_pred eeccccc
Confidence 7776543
No 118
>KOG0643|consensus
Probab=99.23 E-value=1.2e-10 Score=65.23 Aligned_cols=83 Identities=23% Similarity=0.342 Sum_probs=72.2
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCcee-EEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAF-QALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
+.+.++..-|.|- ++.++++. ++|.|..||++++..+ ..-..|...|+.+ ++++..++++++.|.+-++||.+
T Consensus 146 ~~skit~a~Wg~l----~~~ii~Gh-e~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~ 220 (327)
T KOG0643|consen 146 PDSKITSALWGPL----GETIIAGH-EDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVR 220 (327)
T ss_pred Cccceeeeeeccc----CCEEEEec-CCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeecc
Confidence 4467888899998 78888877 6999999999998654 4557799999999 99999999999999999999999
Q ss_pred CCceeeEecC
Q psy14456 80 TRGCTNVLTP 89 (93)
Q Consensus 80 ~~~~~~~~~~ 89 (93)
+-++++++..
T Consensus 221 tl~v~Kty~t 230 (327)
T KOG0643|consen 221 TLEVLKTYTT 230 (327)
T ss_pred ceeeEEEeee
Confidence 9988888754
No 119
>KOG0301|consensus
Probab=99.23 E-value=2.8e-10 Score=70.19 Aligned_cols=78 Identities=29% Similarity=0.555 Sum_probs=66.7
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|+.-|..+++-++ .-++++++ ||.|+.|++ ++.++..+.+|++-++++ ...+...+++++.|+++++|+..
T Consensus 178 HtD~VRgL~vl~~-----~~flScsN-Dg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~- 249 (745)
T KOG0301|consen 178 HTDCVRGLAVLDD-----SHFLSCSN-DGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD- 249 (745)
T ss_pred chhheeeeEEecC-----CCeEeecC-CceEEEEec-cCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC-
Confidence 7888999999886 34778775 999999998 788888899999999999 78888999999999999999876
Q ss_pred CceeeEec
Q psy14456 81 RGCTNVLT 88 (93)
Q Consensus 81 ~~~~~~~~ 88 (93)
.+.+.+.
T Consensus 250 -e~~q~I~ 256 (745)
T KOG0301|consen 250 -ECVQVIT 256 (745)
T ss_pred -ceEEEEe
Confidence 5666554
No 120
>KOG0310|consensus
Probab=99.22 E-value=2.2e-10 Score=68.10 Aligned_cols=80 Identities=28% Similarity=0.361 Sum_probs=67.0
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCce-eEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQA-FQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
|..+|..+.+-|. ++.++++| ...+++||+.+|.. +..+..|...|+|+ +..++.-|++++.|+.+++||+.
T Consensus 195 hg~pVe~vl~lps----gs~iasAg--Gn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t 268 (487)
T KOG0310|consen 195 HGCPVESVLALPS----GSLIASAG--GNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTT 268 (487)
T ss_pred CCCceeeEEEcCC----CCEEEEcC--CCeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEcc
Confidence 6778999999998 68888876 79999999986654 45555699999999 99999999999999999999987
Q ss_pred CCceeeEe
Q psy14456 80 TRGCTNVL 87 (93)
Q Consensus 80 ~~~~~~~~ 87 (93)
+.+....+
T Consensus 269 ~~Kvv~s~ 276 (487)
T KOG0310|consen 269 NYKVVHSW 276 (487)
T ss_pred ceEEEEee
Confidence 76655544
No 121
>KOG2111|consensus
Probab=99.22 E-value=3.6e-10 Score=64.45 Aligned_cols=77 Identities=17% Similarity=0.271 Sum_probs=65.5
Q ss_pred CCccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEee--ccccceEEE-EecCCCEEEEecCCCcEEEEe
Q psy14456 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALS--GHSGHVLSL-YNWGGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~--~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d 77 (93)
.|.+.|.|++..-+ +..+++++...-.||+||..+|..++.+. ...+.+.++ |+|+..+++..+..+++.++.
T Consensus 179 AH~s~Iacv~Ln~~----Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~ 254 (346)
T KOG2111|consen 179 AHDSDIACVALNLQ----GTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFS 254 (346)
T ss_pred cccCceeEEEEcCC----ccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEE
Confidence 38899999999988 78888887545557899999999988885 245689999 999999999999999999998
Q ss_pred CCCC
Q psy14456 78 LRTR 81 (93)
Q Consensus 78 ~~~~ 81 (93)
++..
T Consensus 255 l~~~ 258 (346)
T KOG2111|consen 255 LRDT 258 (346)
T ss_pred eecC
Confidence 8753
No 122
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.22 E-value=1.2e-10 Score=47.58 Aligned_cols=37 Identities=35% Similarity=0.673 Sum_probs=34.8
Q ss_pred ceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEe
Q psy14456 41 QAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 41 ~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d 77 (93)
+++..+.+|.+.+.++ |+|++..+++++.|+.+++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 5678899999999999 999999999999999999997
No 123
>KOG4328|consensus
Probab=99.19 E-value=2e-10 Score=68.03 Aligned_cols=78 Identities=21% Similarity=0.302 Sum_probs=64.7
Q ss_pred CCccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC----ceeEEeeccccceEEE-Eec-CCCEEEEecCCCcEE
Q psy14456 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG----QAFQALSGHSGHVLSL-YNW-GGATVLSGSHDRTVR 74 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~----~~~~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~ 74 (93)
++.++|++++|+|.. ...++++|+..|.|-+||+.+. .-+..+..|..+|.++ |+| +...+++.+.||+++
T Consensus 184 v~~~Rit~l~fHPt~---~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR 260 (498)
T KOG4328|consen 184 VTDRRITSLAFHPTE---NRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIR 260 (498)
T ss_pred ecccceEEEEecccC---cceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceee
Confidence 367899999999985 5477888888999999999532 2356667899999999 999 567888999999999
Q ss_pred EEeCCCC
Q psy14456 75 FWDLRTR 81 (93)
Q Consensus 75 ~~d~~~~ 81 (93)
+-|++.+
T Consensus 261 ~~D~~~~ 267 (498)
T KOG4328|consen 261 LQDFEGN 267 (498)
T ss_pred eeeecch
Confidence 9999865
No 124
>KOG3914|consensus
Probab=99.17 E-value=1.6e-10 Score=67.28 Aligned_cols=82 Identities=26% Similarity=0.387 Sum_probs=65.7
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEe-eccccceEEEEecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQAL-SGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|-+.+++++|+|+ .+.++++. +|..|++-...--..+..+ .||+.-|..+--.+++.|.+++.|+++++||+++
T Consensus 150 hvSml~dVavS~D----~~~IitaD-RDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~~LlS~sGD~tlr~Wd~~s 224 (390)
T KOG3914|consen 150 HVSMLLDVAVSPD----DQFIITAD-RDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNYLLLSGSGDKTLRLWDITS 224 (390)
T ss_pred hhhhhheeeecCC----CCEEEEec-CCceEEEEecCcccchhhhccccHhheeeeeeccCceeeecCCCCcEEEEeccc
Confidence 5578999999999 78888876 8999998776655555544 5899988887222567789999999999999999
Q ss_pred CceeeEec
Q psy14456 81 RGCTNVLT 88 (93)
Q Consensus 81 ~~~~~~~~ 88 (93)
|+++..+.
T Consensus 225 gk~L~t~d 232 (390)
T KOG3914|consen 225 GKLLDTCD 232 (390)
T ss_pred CCcccccc
Confidence 99886664
No 125
>KOG0771|consensus
Probab=99.16 E-value=1.4e-10 Score=67.73 Aligned_cols=76 Identities=25% Similarity=0.308 Sum_probs=64.9
Q ss_pred eEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceee
Q psy14456 7 RDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTN 85 (93)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~ 85 (93)
.+++|..+ +..++++| .||.+|+|+......+.....|...|.++ |+|++..+++.+.| ...+|+.+++.+++
T Consensus 148 k~vaf~~~----gs~latgg-~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a 221 (398)
T KOG0771|consen 148 KVVAFNGD----GSKLATGG-TDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALA 221 (398)
T ss_pred eEEEEcCC----CCEeeecc-ccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhh
Confidence 56788877 78888888 59999999987777777778899999999 99999999999999 99999999996655
Q ss_pred Eec
Q psy14456 86 VLT 88 (93)
Q Consensus 86 ~~~ 88 (93)
...
T Consensus 222 ~~t 224 (398)
T KOG0771|consen 222 RKT 224 (398)
T ss_pred hcC
Confidence 443
No 126
>KOG1445|consensus
Probab=99.16 E-value=2.3e-10 Score=70.68 Aligned_cols=82 Identities=23% Similarity=0.345 Sum_probs=71.5
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCC-
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTR- 81 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~- 81 (93)
-.|.|+.|+|. .+-++.++. .|.+.+||+.+++.+..+.+|...|.+. |+.+|.++++.+.|+.+++||.+..
T Consensus 129 ~~vE~l~fHpT----aDgil~s~a-~g~v~i~D~stqk~~~el~~h~d~vQSa~WseDG~llatscKdkqirifDPRa~~ 203 (1012)
T KOG1445|consen 129 VIVECLRFHPT----ADGILASGA-HGSVYITDISTQKTAVELSGHTDKVQSADWSEDGKLLATSCKDKQIRIFDPRASM 203 (1012)
T ss_pred eEEEEeecccC----cCceEEecc-CceEEEEEcccCceeecccCCchhhhccccccCCceEeeecCCcceEEeCCccCC
Confidence 35889999998 666777775 9999999999999999999999999999 9999999999999999999999964
Q ss_pred ceeeEecCc
Q psy14456 82 GCTNVLTPI 90 (93)
Q Consensus 82 ~~~~~~~~~ 90 (93)
..++...+|
T Consensus 204 ~piQ~te~H 212 (1012)
T KOG1445|consen 204 EPIQTTEGH 212 (1012)
T ss_pred Ccccccccc
Confidence 456655554
No 127
>KOG0308|consensus
Probab=99.15 E-value=7.6e-10 Score=68.05 Aligned_cols=76 Identities=25% Similarity=0.263 Sum_probs=69.5
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|+..|.++-.+++ +..++++++ |++|++||+...+|+.++..|...+.++ .+++-..+.+|+.|+.|..=|+++
T Consensus 212 HTdNVr~ll~~dD----Gt~~ls~sS-DgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n 286 (735)
T KOG0308|consen 212 HTDNVRVLLVNDD----GTRLLSASS-DGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRN 286 (735)
T ss_pred cccceEEEEEcCC----CCeEeecCC-CceEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCC
Confidence 8899999999999 788888875 9999999999999999999999999999 888888999999999999999998
Q ss_pred Cc
Q psy14456 81 RG 82 (93)
Q Consensus 81 ~~ 82 (93)
..
T Consensus 287 ~~ 288 (735)
T KOG0308|consen 287 PA 288 (735)
T ss_pred ch
Confidence 43
No 128
>KOG1274|consensus
Probab=99.15 E-value=5.3e-10 Score=70.66 Aligned_cols=82 Identities=24% Similarity=0.395 Sum_probs=72.5
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCC
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~ 81 (93)
+-++.+++|+-+ ++++++++ .|-.|++.+..+......+.+|.++|.++ |+|.+.++++.+.||.+.+||+..+
T Consensus 96 tlp~r~~~v~g~----g~~iaags-dD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~ 170 (933)
T KOG1274|consen 96 TLPIRDLAVSGS----GKMIAAGS-DDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDG 170 (933)
T ss_pred eccceEEEEecC----CcEEEeec-CceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccc
Confidence 457888999877 77888776 59999999999999999999999999999 9999999999999999999999998
Q ss_pred ceeeEecC
Q psy14456 82 GCTNVLTP 89 (93)
Q Consensus 82 ~~~~~~~~ 89 (93)
.+..++..
T Consensus 171 ~~~~tl~~ 178 (933)
T KOG1274|consen 171 ILSKTLTG 178 (933)
T ss_pred hhhhhccc
Confidence 77766654
No 129
>KOG0321|consensus
Probab=99.15 E-value=1.3e-10 Score=71.16 Aligned_cols=76 Identities=29% Similarity=0.423 Sum_probs=64.9
Q ss_pred CCccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEE--eeccccceEEE-Eec-CCCEEEEecCCCcEEEE
Q psy14456 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQA--LSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFW 76 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~--~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~ 76 (93)
.|-..|.++.|.|. ...|++.. .|.++++||++...+... +.+|...+..+ |.+ +...+++|+.|+.+.+|
T Consensus 98 aH~nAifDl~wapg----e~~lVsas-GDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illW 172 (720)
T KOG0321|consen 98 AHKNAIFDLKWAPG----ESLLVSAS-GDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLW 172 (720)
T ss_pred cccceeEeeccCCC----ceeEEEcc-CCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEE
Confidence 48889999999995 56666655 599999999998887665 78999999999 988 56788999999999999
Q ss_pred eCCCC
Q psy14456 77 DLRTR 81 (93)
Q Consensus 77 d~~~~ 81 (93)
|++-.
T Consensus 173 D~R~n 177 (720)
T KOG0321|consen 173 DCRCN 177 (720)
T ss_pred EEecc
Confidence 99854
No 130
>KOG0646|consensus
Probab=99.14 E-value=1.2e-09 Score=64.75 Aligned_cols=81 Identities=25% Similarity=0.380 Sum_probs=67.3
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCC---------CCceeEEeeccccceEEE-EecC--CCEEEEecC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCA---------TGQAFQALSGHSGHVLSL-YNWG--GATVLSGSH 69 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~---------~~~~~~~~~~~~~~v~~~-~~~~--~~~~~s~~~ 69 (93)
|=..|+|+.|+.+ +..++++| .||.|.+|++. +..+++.+..|+-.|+++ ..+. ...++|++.
T Consensus 122 HYQ~ITcL~fs~d----gs~iiTgs-kDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~ 196 (476)
T KOG0646|consen 122 HYQSITCLKFSDD----GSHIITGS-KDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASE 196 (476)
T ss_pred hccceeEEEEeCC----CcEEEecC-CCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecC
Confidence 5578999999998 78999988 69999999863 235678888999999998 6554 457899999
Q ss_pred CCcEEEEeCCCCceeeEe
Q psy14456 70 DRTVRFWDLRTRGCTNVL 87 (93)
Q Consensus 70 ~~~i~~~d~~~~~~~~~~ 87 (93)
|+++++||+..+..+..+
T Consensus 197 D~t~k~wdlS~g~LLlti 214 (476)
T KOG0646|consen 197 DRTIKLWDLSLGVLLLTI 214 (476)
T ss_pred CceEEEEEeccceeeEEE
Confidence 999999999998776655
No 131
>KOG1007|consensus
Probab=99.14 E-value=1.7e-10 Score=65.28 Aligned_cols=85 Identities=16% Similarity=0.203 Sum_probs=64.7
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEe-eccccceEEE-EecCC-CEEEEecCCCcEEEEeCC
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQAL-SGHSGHVLSL-YNWGG-ATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~-~~~~~~v~~~-~~~~~-~~~~s~~~~~~i~~~d~~ 79 (93)
+...+.-+|+|... ++.+++.+ ++++..||.++..+...+ ..|...+..+ |+|.. ..+++|+.|+.+++||.|
T Consensus 170 ~~~ftsg~WspHHd--gnqv~tt~--d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R 245 (370)
T KOG1007|consen 170 RHSFTSGAWSPHHD--GNQVATTS--DSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTR 245 (370)
T ss_pred cceecccccCCCCc--cceEEEeC--CCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEecc
Confidence 34566678888431 45566653 999999999998887766 4688889999 99965 467899999999999999
Q ss_pred CC-ceeeEecCcc
Q psy14456 80 TR-GCTNVLTPIT 91 (93)
Q Consensus 80 ~~-~~~~~~~~~~ 91 (93)
.. .+++.+.+|.
T Consensus 246 ~tk~pv~el~~Hs 258 (370)
T KOG1007|consen 246 KTKFPVQELPGHS 258 (370)
T ss_pred CCCccccccCCCc
Confidence 64 4677766653
No 132
>KOG1446|consensus
Probab=99.14 E-value=3.6e-09 Score=60.15 Aligned_cols=81 Identities=28% Similarity=0.369 Sum_probs=66.9
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccce---EEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHV---LSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v---~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
...+.+.|+|+ ++.++.+. ..+.+.+.|.-+|..+..+..+.+.- ... |.|+++.+++++.|+.+.+|+++
T Consensus 188 ~ew~~l~FS~d----GK~iLlsT-~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~ 262 (311)
T KOG1446|consen 188 AEWTDLEFSPD----GKSILLST-NASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLE 262 (311)
T ss_pred cceeeeEEcCC----CCEEEEEe-CCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcC
Confidence 46788999999 67766665 48999999999999888887665432 233 89999999999999999999999
Q ss_pred CCceeeEecC
Q psy14456 80 TRGCTNVLTP 89 (93)
Q Consensus 80 ~~~~~~~~~~ 89 (93)
++.....+.+
T Consensus 263 tg~~v~~~~~ 272 (311)
T KOG1446|consen 263 TGKKVAVLRG 272 (311)
T ss_pred CCcEeeEecC
Confidence 9988777765
No 133
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.14 E-value=2.8e-09 Score=58.08 Aligned_cols=78 Identities=12% Similarity=0.233 Sum_probs=59.4
Q ss_pred CccceeEEEEEecCCCCcceEEEeee--CCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecC------CCc
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGA--GDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSH------DRT 72 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~--~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~------~~~ 72 (93)
++..+..+.|+|. +++++.+|. ..|.+.+||.+..+.+.... |. .+..+ |+|+|++++++.. |..
T Consensus 99 ~~~~~n~i~wsP~----G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~-~~-~~t~~~WsPdGr~~~ta~t~~r~~~dng 172 (194)
T PF08662_consen 99 GTQPRNTISWSPD----GRFLVLAGFGNLNGDLEFWDVRKKKKISTFE-HS-DATDVEWSPDGRYLATATTSPRLRVDNG 172 (194)
T ss_pred cCCCceEEEECCC----CCEEEEEEccCCCcEEEEEECCCCEEeeccc-cC-cEEEEEEcCCCCEEEEEEeccceecccc
Confidence 4567889999999 788888763 35779999999888777654 33 35677 9999999998764 678
Q ss_pred EEEEeCCCCceeeE
Q psy14456 73 VRFWDLRTRGCTNV 86 (93)
Q Consensus 73 i~~~d~~~~~~~~~ 86 (93)
+++|++. |..+..
T Consensus 173 ~~Iw~~~-G~~l~~ 185 (194)
T PF08662_consen 173 FKIWSFQ-GRLLYK 185 (194)
T ss_pred EEEEEec-CeEeEe
Confidence 8999985 554443
No 134
>KOG1539|consensus
Probab=99.14 E-value=6.6e-10 Score=69.80 Aligned_cols=70 Identities=26% Similarity=0.370 Sum_probs=61.2
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCC-CcEEEEe
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHD-RTVRFWD 77 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~-~~i~~~d 77 (93)
|+++|++++|+|+ ++++++++ .|++|++||+.++.++-.+. -..+..++ |+|.+.+++|.-.| .-|.+|.
T Consensus 575 h~nritd~~FS~D----grWlisas-mD~tIr~wDlpt~~lID~~~-vd~~~~sls~SPngD~LAT~Hvd~~gIylWs 646 (910)
T KOG1539|consen 575 HGNRITDMTFSPD----GRWLISAS-MDSTIRTWDLPTGTLIDGLL-VDSPCTSLSFSPNGDFLATVHVDQNGIYLWS 646 (910)
T ss_pred cccceeeeEeCCC----CcEEEEee-cCCcEEEEeccCcceeeeEe-cCCcceeeEECCCCCEEEEEEecCceEEEEE
Confidence 8899999999999 89999987 49999999999999887664 45667888 99999999999877 6788885
No 135
>KOG1538|consensus
Probab=99.13 E-value=3.4e-10 Score=70.31 Aligned_cols=69 Identities=29% Similarity=0.589 Sum_probs=61.6
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
.|..++|-|+| .++++++ +..+.+||.+.|..++++++|++.|+++ |+.+|..+++|+.|..+.+|..+
T Consensus 14 ci~d~afkPDG---sqL~lAA---g~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~k 83 (1081)
T KOG1538|consen 14 CINDIAFKPDG---TQLILAA---GSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSK 83 (1081)
T ss_pred chheeEECCCC---ceEEEec---CCEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEeccc
Confidence 57899999995 5555554 5689999999999999999999999999 99999999999999999999765
No 136
>KOG0772|consensus
Probab=99.13 E-value=1.9e-10 Score=69.24 Aligned_cols=75 Identities=20% Similarity=0.367 Sum_probs=58.0
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCc-eeEEee-----ccccceEEE-EecCCCEEEEecCCCcEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQ-AFQALS-----GHSGHVLSL-YNWGGATVLSGSHDRTVR 74 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~-~~~~~~-----~~~~~v~~~-~~~~~~~~~s~~~~~~i~ 74 (93)
|.+.++|-+|+|.. ...+++++ .|+++++|+++... .+..++ +..-.+... |++++.++++++.||.|.
T Consensus 267 Hia~lt~g~whP~~---k~~FlT~s-~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ 342 (641)
T KOG0772|consen 267 HIAELTCGCWHPDN---KEEFLTCS-YDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQ 342 (641)
T ss_pred ceeeeeccccccCc---ccceEEec-CCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCcee
Confidence 77899999999985 55677777 59999999987542 233332 222345566 999999999999999999
Q ss_pred EEeCCC
Q psy14456 75 FWDLRT 80 (93)
Q Consensus 75 ~~d~~~ 80 (93)
+|+.++
T Consensus 343 ~W~~~~ 348 (641)
T KOG0772|consen 343 IWDKGS 348 (641)
T ss_pred eeecCC
Confidence 999764
No 137
>KOG0301|consensus
Probab=99.13 E-value=3.7e-10 Score=69.66 Aligned_cols=80 Identities=26% Similarity=0.379 Sum_probs=67.4
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|+++|..+..-|+ + .+++++ .|..|++|.- +..++++.+|++.|..+ +-+ ...+++|+.|+.|+.|++ +
T Consensus 139 H~asVWAv~~l~e----~-~~vTgs-aDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~-~~~flScsNDg~Ir~w~~-~ 208 (745)
T KOG0301|consen 139 HTASVWAVASLPE----N-TYVTGS-ADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLD-DSHFLSCSNDGSIRLWDL-D 208 (745)
T ss_pred cchheeeeeecCC----C-cEEecc-CcceeeeccC--CchhhhhccchhheeeeEEec-CCCeEeecCCceEEEEec-c
Confidence 8899999999887 4 667765 5999999975 77889999999999998 554 456889999999999999 7
Q ss_pred CceeeEecCcc
Q psy14456 81 RGCTNVLTPIT 91 (93)
Q Consensus 81 ~~~~~~~~~~~ 91 (93)
|.++....+|+
T Consensus 209 ge~l~~~~ght 219 (745)
T KOG0301|consen 209 GEVLLEMHGHT 219 (745)
T ss_pred Cceeeeeeccc
Confidence 88888887774
No 138
>KOG0322|consensus
Probab=99.13 E-value=1.4e-10 Score=64.84 Aligned_cols=69 Identities=25% Similarity=0.329 Sum_probs=62.8
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeC
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~ 78 (93)
.|..+...|+ ++.++++| =|+.+|+|.-++..++..++-|.+.++++ |+|+..+++.+++|..|.+|++
T Consensus 253 Gv~gvrIRpD----~KIlATAG-WD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 253 GVSGVRIRPD----GKILATAG-WDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred CccceEEccC----CcEEeecc-cCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 3566777888 78889988 59999999999999999999999999999 9999999999999999999985
No 139
>KOG0300|consensus
Probab=99.13 E-value=6.1e-10 Score=64.03 Aligned_cols=81 Identities=28% Similarity=0.474 Sum_probs=61.9
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC-ceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG-QAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~-~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
|....+.++-+|. ..+++++ ++|.+.++||++.. ..+..|++|+..+.+. |.-+ ..+++++.|.++++||++
T Consensus 313 Hd~ELtHcstHpt----QrLVvTs-SrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~d-d~vVSgSDDrTvKvWdLr 386 (481)
T KOG0300|consen 313 HDSELTHCSTHPT----QRLVVTS-SRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTD-DRVVSGSDDRTVKVWDLR 386 (481)
T ss_pred cchhccccccCCc----ceEEEEe-ccCceeEeccchhhcceeeeecccccceeEEEEecC-CceeecCCCceEEEeeec
Confidence 4556677777776 5555555 58999999999844 4577899999999999 8765 568899999999999998
Q ss_pred CC-ceeeEec
Q psy14456 80 TR-GCTNVLT 88 (93)
Q Consensus 80 ~~-~~~~~~~ 88 (93)
+- .++.+++
T Consensus 387 NMRsplATIR 396 (481)
T KOG0300|consen 387 NMRSPLATIR 396 (481)
T ss_pred cccCcceeee
Confidence 74 3444444
No 140
>KOG2110|consensus
Probab=99.10 E-value=3.7e-09 Score=61.37 Aligned_cols=73 Identities=16% Similarity=0.227 Sum_probs=61.8
Q ss_pred cceEEEee-eCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCc-EEEEeCCCCceeeEecCcc
Q psy14456 19 SSLLISGG-AGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRT-VRFWDLRTRGCTNVLTPIT 91 (93)
Q Consensus 19 ~~~~~~~g-~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~-i~~~d~~~~~~~~~~~~~~ 91 (93)
+.+++--+ ...|.|.+||..+-+....+..|.+.+.++ |+++|.+++|++..|+ |+++.+..|+.++.|+...
T Consensus 141 n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~ 216 (391)
T KOG2110|consen 141 NCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGT 216 (391)
T ss_pred CceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCc
Confidence 44555333 237899999999999999999999999999 9999999999998876 5999999999999987643
No 141
>KOG0288|consensus
Probab=99.10 E-value=4.3e-10 Score=65.98 Aligned_cols=66 Identities=29% Similarity=0.477 Sum_probs=57.1
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeecccc--ceEEE-EecCCCEEEEecCCCcEEEE
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSG--HVLSL-YNWGGATVLSGSHDRTVRFW 76 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~--~v~~~-~~~~~~~~~s~~~~~~i~~~ 76 (93)
.+.+.|+|+ +.++++++ .||.|.+|++.++++...+..... .|+++ |++.|..+++++.++.+.+|
T Consensus 390 wtrvvfSpd----~~YvaAGS-~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 390 WTRVVFSPD----GSYVAAGS-ADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLW 458 (459)
T ss_pred cceeEECCC----Cceeeecc-CCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEec
Confidence 677889998 78877766 599999999999999887765444 59999 99999999999999999998
No 142
>KOG0641|consensus
Probab=99.09 E-value=2.1e-09 Score=59.41 Aligned_cols=73 Identities=25% Similarity=0.343 Sum_probs=65.4
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
.+.|..++..|. +.+++++- .|....+||++-++.++.+..|...|.++ |+|...++++++.|..|++-|++.
T Consensus 231 ssavaav~vdps----grll~sg~-~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqg 304 (350)
T KOG0641|consen 231 SSAVAAVAVDPS----GRLLASGH-ADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQG 304 (350)
T ss_pred cceeEEEEECCC----cceeeecc-CCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeeccc
Confidence 467899999997 66666654 69999999999999999999999999999 999999999999999999999874
No 143
>KOG1332|consensus
Probab=99.09 E-value=5.6e-10 Score=61.96 Aligned_cols=63 Identities=22% Similarity=0.343 Sum_probs=54.5
Q ss_pred cceEEEeeeCCCeEEEEeCCCC---ceeEEeeccccceEEE-Eec--CCCEEEEecCCCcEEEEeCCCCc
Q psy14456 19 SSLLISGGAGDCKIYVTDCATG---QAFQALSGHSGHVLSL-YNW--GGATVLSGSHDRTVRFWDLRTRG 82 (93)
Q Consensus 19 ~~~~~~~g~~~~~v~~~~~~~~---~~~~~~~~~~~~v~~~-~~~--~~~~~~s~~~~~~i~~~d~~~~~ 82 (93)
+.+++++++ |++|+|+..+.. ..+..+.+|.+++..+ |.. .|..|++++.|+.+.+|..+.++
T Consensus 23 gkrlATcsS-D~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~ 91 (299)
T KOG1332|consen 23 GKRLATCSS-DGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGR 91 (299)
T ss_pred cceeeeecC-CccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCc
Confidence 678899886 999999998754 4577889999999999 754 79999999999999999988874
No 144
>KOG1272|consensus
Probab=99.08 E-value=2.1e-10 Score=68.18 Aligned_cols=69 Identities=22% Similarity=0.322 Sum_probs=58.7
Q ss_pred eEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEecC
Q psy14456 21 LLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLTP 89 (93)
Q Consensus 21 ~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~ 89 (93)
-++-.|-.+|+|.+|......++..+..|.+++.++ +.++|++++|.+.|+.+++||++....+.+++.
T Consensus 264 aVih~GhsnGtVSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t 333 (545)
T KOG1272|consen 264 AVIHLGHSNGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT 333 (545)
T ss_pred ceEEEcCCCceEEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeec
Confidence 344445459999999999999988888999999999 999999999999999999999998765555543
No 145
>KOG0300|consensus
Probab=99.08 E-value=4.1e-10 Score=64.72 Aligned_cols=85 Identities=22% Similarity=0.341 Sum_probs=72.6
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|.+.|.++.|-.. ++.++++. =|.+..+||++++..++.+.+|..+.+.. -+|...++++.+.|.+.++||++.
T Consensus 271 H~~vV~a~dWL~g----g~Q~vTaS-WDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFRe 345 (481)
T KOG0300|consen 271 HRAVVSACDWLAG----GQQMVTAS-WDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFRE 345 (481)
T ss_pred cccceEehhhhcC----cceeeeee-ccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchh
Confidence 6788999999877 67777765 69999999999999999999999998887 788888999999999999999996
Q ss_pred Cc-eeeEecCcc
Q psy14456 81 RG-CTNVLTPIT 91 (93)
Q Consensus 81 ~~-~~~~~~~~~ 91 (93)
.- ....|.+|+
T Consensus 346 aI~sV~VFQGHt 357 (481)
T KOG0300|consen 346 AIQSVAVFQGHT 357 (481)
T ss_pred hcceeeeecccc
Confidence 43 466676764
No 146
>KOG1310|consensus
Probab=99.08 E-value=1.3e-09 Score=66.33 Aligned_cols=74 Identities=28% Similarity=0.512 Sum_probs=63.6
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEe-eccccceEEE-Eec--CCCEEEEecCCCcEEEEe
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQAL-SGHSGHVLSL-YNW--GGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~-~~~~~~v~~~-~~~--~~~~~~s~~~~~~i~~~d 77 (93)
|++=|.|+.|..+ +.+++++ +.|-.+.|||.-..+.+..+ .+|...|.+. |-| ....+++|+.|..|+++|
T Consensus 49 H~GCVN~LeWn~d----G~lL~SG-SDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfd 123 (758)
T KOG1310|consen 49 HTGCVNCLEWNAD----GELLASG-SDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFD 123 (758)
T ss_pred ccceecceeecCC----CCEEeec-CCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEe
Confidence 7889999999988 6776665 57999999999877777766 5899999999 988 456888999999999999
Q ss_pred CCC
Q psy14456 78 LRT 80 (93)
Q Consensus 78 ~~~ 80 (93)
+..
T Consensus 124 l~~ 126 (758)
T KOG1310|consen 124 LDS 126 (758)
T ss_pred ccc
Confidence 985
No 147
>KOG2110|consensus
Probab=99.07 E-value=4.2e-09 Score=61.18 Aligned_cols=77 Identities=22% Similarity=0.348 Sum_probs=64.4
Q ss_pred CCccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEee-cc-ccceEEE-EecCCCEEEEecCCCcEEEEe
Q psy14456 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALS-GH-SGHVLSL-YNWGGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~-~~-~~~v~~~-~~~~~~~~~s~~~~~~i~~~d 77 (93)
.|.+++.|++|+++ +.+++++..+.-.||++.+..|+.+..|. |. -..+..+ |++++++|++.+..++|++|.
T Consensus 171 aH~~~lAalafs~~----G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFK 246 (391)
T KOG2110|consen 171 AHKGPLAALAFSPD----GTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFK 246 (391)
T ss_pred ecCCceeEEEECCC----CCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEE
Confidence 48999999999999 78888887544557899999999998885 22 2467788 999999999999999999998
Q ss_pred CCCC
Q psy14456 78 LRTR 81 (93)
Q Consensus 78 ~~~~ 81 (93)
+.+.
T Consensus 247 L~~~ 250 (391)
T KOG2110|consen 247 LEKV 250 (391)
T ss_pred eccc
Confidence 8754
No 148
>KOG0644|consensus
Probab=99.06 E-value=6.6e-11 Score=74.50 Aligned_cols=85 Identities=24% Similarity=0.385 Sum_probs=77.4
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|..+|+|..|... +.+++++. .|..++||.++++.++..+.||.+.+..+ .+.....+++++.|..|++|.++.
T Consensus 189 H~naVyca~fDrt----g~~Iitgs-dd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~ 263 (1113)
T KOG0644|consen 189 HRNAVYCAIFDRT----GRYIITGS-DDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPD 263 (1113)
T ss_pred hhhheeeeeeccc----cceEeecC-ccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCC
Confidence 7789999999988 78888865 69999999999999999999999999999 887888889999999999999999
Q ss_pred CceeeEecCcc
Q psy14456 81 RGCTNVLTPIT 91 (93)
Q Consensus 81 ~~~~~~~~~~~ 91 (93)
+..+..+++|+
T Consensus 264 ~~pvsvLrght 274 (1113)
T KOG0644|consen 264 GAPVSVLRGHT 274 (1113)
T ss_pred CchHHHHhccc
Confidence 99988888886
No 149
>KOG0290|consensus
Probab=99.05 E-value=4.6e-09 Score=59.72 Aligned_cols=85 Identities=20% Similarity=0.222 Sum_probs=66.6
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCce---eEEeeccccceEEE-EecC-CCEEEEecCCCcEEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQA---FQALSGHSGHVLSL-YNWG-GATVLSGSHDRTVRFW 76 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~---~~~~~~~~~~v~~~-~~~~-~~~~~s~~~~~~i~~~ 76 (93)
|.+++++.+|..-. .+++.++. -|-+..+||++++.. ...+-+|..+|..+ |..+ ...+++++.||.+++|
T Consensus 149 ~~aPlTSFDWne~d---p~~igtSS-iDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmF 224 (364)
T KOG0290|consen 149 FCAPLTSFDWNEVD---PNLIGTSS-IDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMF 224 (364)
T ss_pred cCCcccccccccCC---cceeEeec-ccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEE
Confidence 35678888887653 56677766 599999999998743 55677899999999 9874 4688999999999999
Q ss_pred eCCCCceeeEecCc
Q psy14456 77 DLRTRGCTNVLTPI 90 (93)
Q Consensus 77 d~~~~~~~~~~~~~ 90 (93)
|+|....-..+++.
T Consensus 225 DLR~leHSTIIYE~ 238 (364)
T KOG0290|consen 225 DLRSLEHSTIIYED 238 (364)
T ss_pred EecccccceEEecC
Confidence 99987655555443
No 150
>KOG2394|consensus
Probab=99.05 E-value=1.6e-09 Score=65.53 Aligned_cols=50 Identities=22% Similarity=0.405 Sum_probs=46.6
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-Ee
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YN 58 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~ 58 (93)
+...|++|+|| +++++++| +|-.|.||.+...+.+..-++|++.|..+ |.
T Consensus 333 GGLLCvcWSPD----GKyIvtGG-EDDLVtVwSf~erRVVARGqGHkSWVs~VaFD 383 (636)
T KOG2394|consen 333 GGLLCVCWSPD----GKYIVTGG-EDDLVTVWSFEERRVVARGQGHKSWVSVVAFD 383 (636)
T ss_pred cceEEEEEcCC----ccEEEecC-CcceEEEEEeccceEEEeccccccceeeEeec
Confidence 56899999999 89999998 79999999999999999999999999999 98
No 151
>KOG0299|consensus
Probab=99.04 E-value=2.1e-09 Score=63.74 Aligned_cols=85 Identities=27% Similarity=0.379 Sum_probs=70.9
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCcee-----------------EEe-eccccceEEE-EecCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAF-----------------QAL-SGHSGHVLSL-YNWGGA 62 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~-----------------~~~-~~~~~~v~~~-~~~~~~ 62 (93)
|.-++++++++|+ .++.++++ .+++|.-|++.++... ..- ..|...+.++ .++++.
T Consensus 141 H~~s~~~vals~d----~~~~fsas-k~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgk 215 (479)
T KOG0299|consen 141 HQLSVTSVALSPD----DKRVFSAS-KDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGK 215 (479)
T ss_pred ccCcceEEEeecc----ccceeecC-CCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCc
Confidence 7789999999999 78888877 5999999998765421 111 2677788899 999999
Q ss_pred EEEEecCCCcEEEEeCCCCceeeEecCcc
Q psy14456 63 TVLSGSHDRTVRFWDLRTRGCTNVLTPIT 91 (93)
Q Consensus 63 ~~~s~~~~~~i~~~d~~~~~~~~~~~~~~ 91 (93)
++++++.|..+.+|+.++.+.++.+..|.
T Consensus 216 ylatgg~d~~v~Iw~~~t~ehv~~~~ghr 244 (479)
T KOG0299|consen 216 YLATGGRDRHVQIWDCDTLEHVKVFKGHR 244 (479)
T ss_pred EEEecCCCceEEEecCcccchhhcccccc
Confidence 99999999999999999999988887774
No 152
>KOG2445|consensus
Probab=99.02 E-value=6.3e-09 Score=59.44 Aligned_cols=73 Identities=22% Similarity=0.360 Sum_probs=60.5
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC----ceeEEeeccccceEEE-Eec--CCCEEEEecCCCcEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG----QAFQALSGHSGHVLSL-YNW--GGATVLSGSHDRTVR 74 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~----~~~~~~~~~~~~v~~~-~~~--~~~~~~s~~~~~~i~ 74 (93)
|..-|.|+.|.+- ++.++++.+ |.+++|||.+.. .+--....|.+.|..+ |.+ -|+.+++++.|+++.
T Consensus 12 h~DlihdVs~D~~----GRRmAtCSs-Dq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~ 86 (361)
T KOG2445|consen 12 HKDLIHDVSFDFY----GRRMATCSS-DQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVS 86 (361)
T ss_pred Ccceeeeeeeccc----CceeeeccC-CCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCcee
Confidence 6678999999988 788898875 999999997544 3445667899999988 754 589999999999999
Q ss_pred EEeCC
Q psy14456 75 FWDLR 79 (93)
Q Consensus 75 ~~d~~ 79 (93)
+|+-.
T Consensus 87 iWEE~ 91 (361)
T KOG2445|consen 87 IWEEQ 91 (361)
T ss_pred eeeec
Confidence 99763
No 153
>KOG0268|consensus
Probab=99.02 E-value=3.2e-10 Score=65.73 Aligned_cols=73 Identities=15% Similarity=0.303 Sum_probs=60.3
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|...|.|++=+|. .-..+++|+.||.|++||+....++..++.|.+.|..+ +.. ..+++++.|.+++.|.+.-
T Consensus 65 HrdGV~~lakhp~----~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~~~ 138 (433)
T KOG0268|consen 65 HRDGVSCLAKHPN----KLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKIDG 138 (433)
T ss_pred cccccchhhcCcc----hhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecCCcceeeeeccC
Confidence 6778889988887 42334445579999999999999999999999999998 654 7788999999999998653
No 154
>KOG0321|consensus
Probab=99.01 E-value=1.1e-09 Score=67.29 Aligned_cols=80 Identities=25% Similarity=0.479 Sum_probs=56.2
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCc---------------------------eeEEeeccccceE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQ---------------------------AFQALSGHSGHVL 54 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~---------------------------~~~~~~~~~~~v~ 54 (93)
|++.|..++|.|. ...+++.|.+||.+.+||++... .....+.+.+.+.
T Consensus 143 H~~SvkS~cf~~~----n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ 218 (720)
T KOG0321|consen 143 HTGSVKSECFMPT----NPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIF 218 (720)
T ss_pred cccccchhhhccC----CCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCcee
Confidence 7889999999998 44444445589999999985210 1122233444444
Q ss_pred E---E-EecCCCEEEEecC-CCcEEEEeCCCCceee
Q psy14456 55 S---L-YNWGGATVLSGSH-DRTVRFWDLRTRGCTN 85 (93)
Q Consensus 55 ~---~-~~~~~~~~~s~~~-~~~i~~~d~~~~~~~~ 85 (93)
. + +..|...|++++. |+.|++||+++..+..
T Consensus 219 ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~ 254 (720)
T KOG0321|consen 219 SSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAY 254 (720)
T ss_pred eeeEEEEEeccceeeeccCCCcceEEEeeccccccc
Confidence 4 4 7778889998886 9999999999865443
No 155
>KOG0642|consensus
Probab=99.00 E-value=5.2e-09 Score=63.46 Aligned_cols=77 Identities=29% Similarity=0.330 Sum_probs=64.6
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC----------ceeEEeeccccceEEE-EecCCCEEEEecCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG----------QAFQALSGHSGHVLSL-YNWGGATVLSGSHD 70 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~----------~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~ 70 (93)
|.++|.|+++.++ ++.++++|- ||.|+.|++... .....+.||.+.+..+ +++....+++++.|
T Consensus 343 H~gPVl~v~v~~n----~~~~ysgg~-Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~D 417 (577)
T KOG0642|consen 343 HEGPVLCVVVPSN----GEHCYSGGI-DGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSD 417 (577)
T ss_pred ccCceEEEEecCC----ceEEEeecc-CceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCC
Confidence 8899999999988 788999884 999999965421 2345778999999888 88888889999999
Q ss_pred CcEEEEeCCCCce
Q psy14456 71 RTVRFWDLRTRGC 83 (93)
Q Consensus 71 ~~i~~~d~~~~~~ 83 (93)
++++.|+......
T Consensus 418 gTvr~w~~~~~~~ 430 (577)
T KOG0642|consen 418 GTVRLWEPTEESP 430 (577)
T ss_pred ceEEeeccCCcCc
Confidence 9999999876554
No 156
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=98.99 E-value=2.4e-08 Score=56.71 Aligned_cols=79 Identities=14% Similarity=0.126 Sum_probs=59.1
Q ss_pred eEEEEEecCCCCcceE-EEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEe-cCCCcEEEEeCCCCce
Q psy14456 7 RDVCFIEDTSNKSSLL-ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSG-SHDRTVRFWDLRTRGC 83 (93)
Q Consensus 7 ~~~~~~~~~~~~~~~~-~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~-~~~~~i~~~d~~~~~~ 83 (93)
..++|+|+ ++.+ ++.+ .++.+.+||.++++....+. +...+.++ |+|++..++++ ..++.+.+||++++.+
T Consensus 210 ~~i~~s~d----g~~~~~~~~-~~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~ 283 (300)
T TIGR03866 210 VGIKLTKD----GKTAFVALG-PANRVAVVDAKTYEVLDYLL-VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKV 283 (300)
T ss_pred cceEECCC----CCEEEEEcC-CCCeEEEEECCCCcEEEEEE-eCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcE
Confidence 35778888 5554 4444 47789999999887765543 34467788 99999988875 4689999999999998
Q ss_pred eeEecCcc
Q psy14456 84 TNVLTPIT 91 (93)
Q Consensus 84 ~~~~~~~~ 91 (93)
+..+....
T Consensus 284 ~~~~~~~~ 291 (300)
T TIGR03866 284 IKSIKVGR 291 (300)
T ss_pred EEEEEccc
Confidence 88776443
No 157
>KOG1332|consensus
Probab=98.98 E-value=3.1e-09 Score=59.11 Aligned_cols=79 Identities=22% Similarity=0.359 Sum_probs=61.2
Q ss_pred CCccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC--c-eeEEeeccccceEEE-EecC---C-----------C
Q psy14456 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG--Q-AFQALSGHSGHVLSL-YNWG---G-----------A 62 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~--~-~~~~~~~~~~~v~~~-~~~~---~-----------~ 62 (93)
.|.+.|++++|.|.+ ..+++++++.||.|.+.+.+.. . .......|.-.++++ |.|. + .
T Consensus 100 ~h~~SVNsV~waphe---ygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~k 176 (299)
T KOG1332|consen 100 AHSASVNSVAWAPHE---YGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVK 176 (299)
T ss_pred hhcccceeecccccc---cceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccc
Confidence 488999999999986 5566666667999999987654 1 123345788888888 8774 3 4
Q ss_pred EEEEecCCCcEEEEeCCCCc
Q psy14456 63 TVLSGSHDRTVRFWDLRTRG 82 (93)
Q Consensus 63 ~~~s~~~~~~i~~~d~~~~~ 82 (93)
.|++++.|..+++|+...++
T Consensus 177 rlvSgGcDn~VkiW~~~~~~ 196 (299)
T KOG1332|consen 177 RLVSGGCDNLVKIWKFDSDS 196 (299)
T ss_pred eeeccCCccceeeeecCCcc
Confidence 58999999999999988763
No 158
>KOG0268|consensus
Probab=98.98 E-value=1.1e-09 Score=63.63 Aligned_cols=79 Identities=25% Similarity=0.393 Sum_probs=62.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEee-ccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALS-GHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~-~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
|.++|.+++|+|. ++-+++++ -|.+|++|..+.+...-... .....|.++ |+.|.+++++|+.|+.+++|...
T Consensus 271 hvsAV~dVdfspt----G~Efvsgs-yDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~ 345 (433)
T KOG0268|consen 271 HVSAVMDVDFSPT----GQEFVSGS-YDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAK 345 (433)
T ss_pred cceeEEEeccCCC----cchhcccc-ccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecc
Confidence 6679999999999 67777765 69999999998876544332 233567899 99999999999999999999876
Q ss_pred CCceee
Q psy14456 80 TRGCTN 85 (93)
Q Consensus 80 ~~~~~~ 85 (93)
..+.+-
T Consensus 346 Aseklg 351 (433)
T KOG0268|consen 346 ASEKLG 351 (433)
T ss_pred hhhhcC
Confidence 554433
No 159
>KOG4378|consensus
Probab=98.97 E-value=6.7e-09 Score=62.71 Aligned_cols=86 Identities=22% Similarity=0.344 Sum_probs=70.0
Q ss_pred CCccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
.|.++...++|+|.. ..++++.| .|..|.+||........++. ...+...+ |.++|.+++.|...|.+..||+|
T Consensus 206 ~HsAP~~gicfspsn---e~l~vsVG-~Dkki~~yD~~s~~s~~~l~-y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R 280 (673)
T KOG4378|consen 206 AHSAPCRGICFSPSN---EALLVSVG-YDKKINIYDIRSQASTDRLT-YSHPLSTVAFSECGTYLCAGNSKGELIAYDMR 280 (673)
T ss_pred hccCCcCcceecCCc---cceEEEec-ccceEEEeecccccccceee-ecCCcceeeecCCceEEEeecCCceEEEEecc
Confidence 388999999999984 45677888 59999999998766666554 56788888 99999999999999999999999
Q ss_pred CC-ceeeEecCcc
Q psy14456 80 TR-GCTNVLTPIT 91 (93)
Q Consensus 80 ~~-~~~~~~~~~~ 91 (93)
.. .++.++..|.
T Consensus 281 ~~k~Pv~v~sah~ 293 (673)
T KOG4378|consen 281 STKAPVAVRSAHD 293 (673)
T ss_pred cCCCCceEeeecc
Confidence 54 4566666554
No 160
>KOG1063|consensus
Probab=98.97 E-value=5e-09 Score=64.95 Aligned_cols=75 Identities=20% Similarity=0.318 Sum_probs=63.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCc----eeEEeeccccceEEE-EecCCCEEEEecCCCcEEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQ----AFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFW 76 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~----~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~ 76 (93)
|.-.|+.++|+|+ +.++++.+ +|.++.+|...... .....+.|+-.|.+. |+|++.+++|++.|.++++|
T Consensus 571 HsLTVT~l~FSpd----g~~LLsvs-RDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW 645 (764)
T KOG1063|consen 571 HSLTVTRLAFSPD----GRYLLSVS-RDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVW 645 (764)
T ss_pred cceEEEEEEECCC----CcEEEEee-cCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEE
Confidence 7778999999999 78888887 89999999875432 123467898899999 99999999999999999999
Q ss_pred eCCCC
Q psy14456 77 DLRTR 81 (93)
Q Consensus 77 d~~~~ 81 (93)
.....
T Consensus 646 ~~~~~ 650 (764)
T KOG1063|consen 646 EEPDL 650 (764)
T ss_pred eccCc
Confidence 88776
No 161
>KOG2919|consensus
Probab=98.96 E-value=3.4e-09 Score=60.95 Aligned_cols=80 Identities=31% Similarity=0.442 Sum_probs=61.6
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC-CceeEEeecccc-ceEEE---EecCCCEEEEecCCCcEEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT-GQAFQALSGHSG-HVLSL---YNWGGATVLSGSHDRTVRFW 76 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~~~~~~~~~-~v~~~---~~~~~~~~~s~~~~~~i~~~ 76 (93)
|.+.|+.+.|.++ ++.+++++-.+-.|..||++. +.++..+..|.. .-..| ..|.++.|++|+.||.|++|
T Consensus 249 h~gGvThL~~~ed----Gn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vw 324 (406)
T KOG2919|consen 249 HGGGVTHLQWCED----GNKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVW 324 (406)
T ss_pred cCCCeeeEEeccC----cCeecccccCCCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEE
Confidence 6789999999999 678888776789999999975 445666666654 22233 46678999999999999999
Q ss_pred eCCC-Cceee
Q psy14456 77 DLRT-RGCTN 85 (93)
Q Consensus 77 d~~~-~~~~~ 85 (93)
|+.. +....
T Consensus 325 dlk~~gn~~s 334 (406)
T KOG2919|consen 325 DLKDLGNEVS 334 (406)
T ss_pred ecCCCCCccc
Confidence 9987 44333
No 162
>KOG0639|consensus
Probab=98.94 E-value=3.4e-09 Score=64.05 Aligned_cols=84 Identities=19% Similarity=0.266 Sum_probs=66.1
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCcee--EEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAF--QALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~--~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
..|..+...|+ ++.++.+| +-.++.|||+...... ..+....-....+ .+||.++.++++.||.|.+||++.
T Consensus 466 nyiRSckL~pd----grtLivGG-eastlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhn 540 (705)
T KOG0639|consen 466 NYIRSCKLLPD----GRTLIVGG-EASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHN 540 (705)
T ss_pred cceeeeEecCC----CceEEecc-ccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEccc
Confidence 45778888998 78888888 6999999998765432 2333333344566 799999999999999999999999
Q ss_pred CceeeEecCccC
Q psy14456 81 RGCTNVLTPITV 92 (93)
Q Consensus 81 ~~~~~~~~~~~~ 92 (93)
...++.|.+|+.
T Consensus 541 q~~VrqfqGhtD 552 (705)
T KOG0639|consen 541 QTLVRQFQGHTD 552 (705)
T ss_pred ceeeecccCCCC
Confidence 999999998863
No 163
>KOG1408|consensus
Probab=98.94 E-value=1.5e-08 Score=63.68 Aligned_cols=83 Identities=22% Similarity=0.386 Sum_probs=71.1
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeec---cccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSG---HSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~---~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
..+++++..|. .+++++++ +|..|++|++..++..+.|++ |.+....+ ..|.+.++++.+.|+++.++|+-
T Consensus 597 tTlYDm~Vdp~----~k~v~t~c-QDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~ 671 (1080)
T KOG1408|consen 597 TTLYDMAVDPT----SKLVVTVC-QDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFV 671 (1080)
T ss_pred ceEEEeeeCCC----cceEEEEe-cccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEec
Confidence 46888999887 67777766 899999999999999888865 45566667 89999999999999999999999
Q ss_pred CCceeeEecCcc
Q psy14456 80 TRGCTNVLTPIT 91 (93)
Q Consensus 80 ~~~~~~~~~~~~ 91 (93)
+|+|.....+|.
T Consensus 672 sgEcvA~m~GHs 683 (1080)
T KOG1408|consen 672 SGECVAQMTGHS 683 (1080)
T ss_pred cchhhhhhcCcc
Confidence 999988877774
No 164
>KOG4328|consensus
Probab=98.93 E-value=6.7e-09 Score=61.79 Aligned_cols=75 Identities=20% Similarity=0.247 Sum_probs=59.1
Q ss_pred CCccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCce----eEEeeccccceEEE-EecCCCEEEEecCCCcEEE
Q psy14456 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQA----FQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~----~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~ 75 (93)
+|...|+.+++.|.. ...+++++ .|++.+|||++.... +.....|.-.|.+. |+|.+-.++|-+.|..|++
T Consensus 320 lh~kKI~sv~~NP~~---p~~laT~s-~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv 395 (498)
T KOG4328|consen 320 LHKKKITSVALNPVC---PWFLATAS-LDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRV 395 (498)
T ss_pred hhhcccceeecCCCC---chheeecc-cCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEE
Confidence 588899999999984 44566666 599999999875422 23335788899999 9997666888889999999
Q ss_pred EeCC
Q psy14456 76 WDLR 79 (93)
Q Consensus 76 ~d~~ 79 (93)
||..
T Consensus 396 ~dss 399 (498)
T KOG4328|consen 396 FDSS 399 (498)
T ss_pred eecc
Confidence 9983
No 165
>KOG2096|consensus
Probab=98.93 E-value=2.1e-08 Score=57.78 Aligned_cols=82 Identities=23% Similarity=0.340 Sum_probs=57.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC------------------------------------cee--
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG------------------------------------QAF-- 43 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~------------------------------------~~~-- 43 (93)
|.+.|++++|+.+ ++++++++ .|+.|++|+++.- ..+
T Consensus 85 H~~~vt~~~FsSd----GK~lat~~-~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~v 159 (420)
T KOG2096|consen 85 HKKEVTDVAFSSD----GKKLATIS-GDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCV 159 (420)
T ss_pred cCCceeeeEEcCC----CceeEEEe-CCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEE
Confidence 7889999999999 89999987 5999999987521 011
Q ss_pred EEee---------------------ccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEecC
Q psy14456 44 QALS---------------------GHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLTP 89 (93)
Q Consensus 44 ~~~~---------------------~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~ 89 (93)
+.+. .|.-.+..+ ....+.++.+++.|..|.+|+++ |+.++.+..
T Consensus 160 yk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idt 226 (420)
T KOG2096|consen 160 YKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDT 226 (420)
T ss_pred EEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeecc
Confidence 1110 122223334 34456678899999999999998 887777643
No 166
>KOG1274|consensus
Probab=98.92 E-value=1.6e-08 Score=64.28 Aligned_cols=83 Identities=20% Similarity=0.275 Sum_probs=66.1
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeecc------c-cceE-EE-EecCCCEEEEecCCCc
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGH------S-GHVL-SL-YNWGGATVLSGSHDRT 72 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~------~-~~v~-~~-~~~~~~~~~s~~~~~~ 72 (93)
|.++|.++.|+|. +.+++++.. ||.|++|++..+.+.+.+.+- . +.+. .+ |+|++..++..+.|+.
T Consensus 137 h~apVl~l~~~p~----~~fLAvss~-dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~ 211 (933)
T KOG1274|consen 137 HDAPVLQLSYDPK----GNFLAVSSC-DGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNT 211 (933)
T ss_pred cCCceeeeeEcCC----CCEEEEEec-CceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCe
Confidence 7899999999998 788887764 999999999988776655321 1 3344 44 9999888888889999
Q ss_pred EEEEeCCCCceeeEecC
Q psy14456 73 VRFWDLRTRGCTNVLTP 89 (93)
Q Consensus 73 i~~~d~~~~~~~~~~~~ 89 (93)
|.+++......+..++.
T Consensus 212 Vkvy~r~~we~~f~Lr~ 228 (933)
T KOG1274|consen 212 VKVYSRKGWELQFKLRD 228 (933)
T ss_pred EEEEccCCceeheeecc
Confidence 99999988887777654
No 167
>KOG0307|consensus
Probab=98.91 E-value=1.5e-09 Score=69.83 Aligned_cols=84 Identities=25% Similarity=0.310 Sum_probs=63.0
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEe--eccccceEEE-EecC-CCEEEEecCCCcEEEEe
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQAL--SGHSGHVLSL-YNWG-GATVLSGSHDRTVRFWD 77 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~--~~~~~~v~~~-~~~~-~~~~~s~~~~~~i~~~d 77 (93)
|++.|..++|.+.. ++.+++++ .+|.|.+||++.-+.-... ....+.|.++ |+.. ...|++++.++...+||
T Consensus 115 h~G~V~gLDfN~~q---~nlLASGa-~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWD 190 (1049)
T KOG0307|consen 115 HTGPVLGLDFNPFQ---GNLLASGA-DDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWD 190 (1049)
T ss_pred cCCceeeeeccccC---CceeeccC-CCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceecc
Confidence 89999999999983 34555555 6999999999865443333 2345788899 8875 45677888999999999
Q ss_pred CCCCceeeEecC
Q psy14456 78 LRTRGCTNVLTP 89 (93)
Q Consensus 78 ~~~~~~~~~~~~ 89 (93)
++..+.+..+..
T Consensus 191 lr~~~pii~ls~ 202 (1049)
T KOG0307|consen 191 LRKKKPIIKLSD 202 (1049)
T ss_pred ccCCCccccccc
Confidence 998876655543
No 168
>KOG0307|consensus
Probab=98.91 E-value=4.6e-09 Score=67.69 Aligned_cols=83 Identities=22% Similarity=0.317 Sum_probs=65.2
Q ss_pred ceeEEEEEecCCCCcceEEEee-eCCCeEEEEeCCCC-ceeEEeeccccceEEE-Eec-CCCEEEEecCCCcEEEEeCCC
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGG-AGDCKIYVTDCATG-QAFQALSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g-~~~~~v~~~~~~~~-~~~~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d~~~ 80 (93)
.+..+.|+|+.. .+.+++++ .+.-.|.+||++-. ..++.+.+|...+.++ |++ |..++++++.|+.+.+|+.++
T Consensus 208 ~~S~l~WhP~~a--Tql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~t 285 (1049)
T KOG0307|consen 208 HCSVLAWHPDHA--TQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNT 285 (1049)
T ss_pred ceeeeeeCCCCc--eeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCC
Confidence 377899999853 34455554 23456889998754 5577788999999999 988 568999999999999999999
Q ss_pred CceeeEecC
Q psy14456 81 RGCTNVLTP 89 (93)
Q Consensus 81 ~~~~~~~~~ 89 (93)
++.+..+..
T Consensus 286 gEvl~~~p~ 294 (1049)
T KOG0307|consen 286 GEVLGELPA 294 (1049)
T ss_pred ceEeeecCC
Confidence 988777643
No 169
>KOG1009|consensus
Probab=98.91 E-value=1.2e-08 Score=59.95 Aligned_cols=72 Identities=22% Similarity=0.326 Sum_probs=59.0
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCc---------eeEEeeccccceEEE-EecCCCEEEEecCCCcE
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQ---------AFQALSGHSGHVLSL-YNWGGATVLSGSHDRTV 73 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~---------~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i 73 (93)
.+|..+.|+++. .++++++|. |..|++|.++.+. -+..+..|...++++ |++++.++++|+.++.+
T Consensus 14 ~pv~s~dfq~n~---~~~laT~G~-D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v 89 (434)
T KOG1009|consen 14 EPVYSVDFQKNS---LNKLATAGG-DKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEV 89 (434)
T ss_pred CceEEEEeccCc---ccceecccC-ccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceE
Confidence 578899998874 347888885 9999999876431 134556789999999 99999999999999999
Q ss_pred EEEeCC
Q psy14456 74 RFWDLR 79 (93)
Q Consensus 74 ~~~d~~ 79 (93)
.+|...
T Consensus 90 ~lWk~~ 95 (434)
T KOG1009|consen 90 FLWKQG 95 (434)
T ss_pred EEEEec
Confidence 999765
No 170
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=98.90 E-value=1.1e-07 Score=55.28 Aligned_cols=85 Identities=36% Similarity=0.546 Sum_probs=68.5
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCC-EEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGA-TVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~-~~~s~~~~~~i~~~d~~ 79 (93)
|...|..++|+|+ +..++.++..++.+++|+...+..+..+.+|...+.++ |.+++. .+++++.|+.+.+||.+
T Consensus 154 ~~~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~ 229 (466)
T COG2319 154 HSESVTSLAFSPD----GKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLS 229 (466)
T ss_pred CcccEEEEEECCC----CCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECC
Confidence 6788999999998 55566554139999999999888888888899999999 998877 55566899999999988
Q ss_pred CCceee-EecCc
Q psy14456 80 TRGCTN-VLTPI 90 (93)
Q Consensus 80 ~~~~~~-~~~~~ 90 (93)
.+.... .+..+
T Consensus 230 ~~~~~~~~~~~~ 241 (466)
T COG2319 230 TGKLLRSTLSGH 241 (466)
T ss_pred CCcEEeeecCCC
Confidence 777766 45444
No 171
>KOG0642|consensus
Probab=98.89 E-value=3.7e-09 Score=64.04 Aligned_cols=73 Identities=26% Similarity=0.472 Sum_probs=59.1
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC--------CceeEEeeccccceEEE-EecCCCEEEEecCCCc
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT--------GQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRT 72 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~--------~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~ 72 (93)
|..-+..+.|+|. ..-++++ +.++.+.+|+++. -+++.+|.+|.++|.|+ +.+.+..+++|+.|++
T Consensus 293 ~~d~ir~l~~~~s----ep~lit~-sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~ 367 (577)
T KOG0642|consen 293 HDDCIRALAFHPS----EPVLITA-SEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGT 367 (577)
T ss_pred chhhhhhhhcCCC----CCeEEEe-ccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCce
Confidence 3455677778776 4556665 4899999999832 14678999999999999 9999999999999999
Q ss_pred EEEEeCC
Q psy14456 73 VRFWDLR 79 (93)
Q Consensus 73 i~~~d~~ 79 (93)
|++|++.
T Consensus 368 I~~w~~p 374 (577)
T KOG0642|consen 368 IRCWNLP 374 (577)
T ss_pred eeeeccC
Confidence 9999665
No 172
>KOG2445|consensus
Probab=98.89 E-value=2e-08 Score=57.43 Aligned_cols=76 Identities=22% Similarity=0.442 Sum_probs=58.4
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC--------------------ceeEEeeccccceEEE-EecC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG--------------------QAFQALSGHSGHVLSL-YNWG 60 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~--------------------~~~~~~~~~~~~v~~~-~~~~ 60 (93)
|+.+|++++|.|.--. .-.+++.++.|| |+||.+... +.+..+..|++.+..+ |+-.
T Consensus 222 ~~dpI~di~wAPn~Gr-~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmt 299 (361)
T KOG2445|consen 222 HTDPIRDISWAPNIGR-SYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMT 299 (361)
T ss_pred CCCcceeeeeccccCC-ceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeee
Confidence 6889999999997311 223455555799 999987621 2344567899999999 9999
Q ss_pred CCEEEEecCCCcEEEEeCC
Q psy14456 61 GATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 61 ~~~~~s~~~~~~i~~~d~~ 79 (93)
|..|.+.+.||.+++|...
T Consensus 300 GtiLsStGdDG~VRLWkan 318 (361)
T KOG2445|consen 300 GTILSSTGDDGCVRLWKAN 318 (361)
T ss_pred eeEEeecCCCceeeehhhh
Confidence 9999999999999999644
No 173
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.89 E-value=1.1e-08 Score=41.67 Aligned_cols=30 Identities=30% Similarity=0.530 Sum_probs=27.0
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEe
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTD 36 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 36 (93)
|++.|++++|+|+ +..+++++ .|+.|++||
T Consensus 10 h~~~i~~i~~~~~----~~~~~s~~-~D~~i~vwd 39 (39)
T PF00400_consen 10 HSSSINSIAWSPD----GNFLASGS-SDGTIRVWD 39 (39)
T ss_dssp SSSSEEEEEEETT----SSEEEEEE-TTSEEEEEE
T ss_pred CCCcEEEEEEecc----cccceeeC-CCCEEEEEC
Confidence 7899999999998 78888877 699999997
No 174
>KOG1188|consensus
Probab=98.88 E-value=1.1e-08 Score=59.00 Aligned_cols=62 Identities=24% Similarity=0.369 Sum_probs=52.4
Q ss_pred eEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-Eec--CCCEEEEecCCCcEEEEeCCCCce
Q psy14456 21 LLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNW--GGATVLSGSHDRTVRFWDLRTRGC 83 (93)
Q Consensus 21 ~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~--~~~~~~s~~~~~~i~~~d~~~~~~ 83 (93)
.++++- .+|.+++||..+++.+..++++...+..+ |.. .+..+.+|+.||.|++||+|....
T Consensus 42 ~vav~l-Sngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e 106 (376)
T KOG1188|consen 42 AVAVSL-SNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAE 106 (376)
T ss_pred eEEEEe-cCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchh
Confidence 355544 59999999999999999999998888888 766 577899999999999999997654
No 175
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=98.88 E-value=1.7e-07 Score=53.25 Aligned_cols=79 Identities=22% Similarity=0.261 Sum_probs=58.2
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEE-EecCCCcEEEEeCCCCc
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVL-SGSHDRTVRFWDLRTRG 82 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~-s~~~~~~i~~~d~~~~~ 82 (93)
.+..++|+|+ +..+++++..++.+.+||..+++....+..+.. +..+ ++++++.++ ++..++.+.+||++++.
T Consensus 32 ~~~~l~~~~d----g~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~ 106 (300)
T TIGR03866 32 RPRGITLSKD----GKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD-PELFALHPNGKILYIANEDDNLVTVIDIETRK 106 (300)
T ss_pred CCCceEECCC----CCEEEEEECCCCeEEEEECCCCcEEEeccCCCC-ccEEEECCCCCEEEEEcCCCCeEEEEECCCCe
Confidence 3567899988 666654444689999999998887776654443 3456 899888665 45568999999999877
Q ss_pred eeeEec
Q psy14456 83 CTNVLT 88 (93)
Q Consensus 83 ~~~~~~ 88 (93)
.+..+.
T Consensus 107 ~~~~~~ 112 (300)
T TIGR03866 107 VLAEIP 112 (300)
T ss_pred EEeEee
Confidence 666554
No 176
>KOG1408|consensus
Probab=98.87 E-value=1.2e-08 Score=64.00 Aligned_cols=74 Identities=22% Similarity=0.355 Sum_probs=65.5
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|.+..--+...|. +.+++++++ |.++.++|.-+++++..+.+|...|+.+ |.++...+++.+.|+.|.+|.+..
T Consensus 640 ~eG~lIKv~lDPS----giY~atScs-dktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~lp~ 714 (1080)
T KOG1408|consen 640 HEGDLIKVILDPS----GIYLATSCS-DKTLCFVDFVSGECVAQMTGHSEAVTGVKFLNDCKHLISVSGDGCIFVWKLPL 714 (1080)
T ss_pred CCCceEEEEECCC----ccEEEEeec-CCceEEEEeccchhhhhhcCcchheeeeeecccchhheeecCCceEEEEECch
Confidence 3455666777777 788888885 9999999999999999999999999999 999999999999999999998764
No 177
>KOG2048|consensus
Probab=98.85 E-value=3.5e-08 Score=61.08 Aligned_cols=82 Identities=21% Similarity=0.257 Sum_probs=61.0
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEee-----ccc-c--ceEEE-EecCCCEEEEecCCCcE
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALS-----GHS-G--HVLSL-YNWGGATVLSGSHDRTV 73 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~-----~~~-~--~v~~~-~~~~~~~~~s~~~~~~i 73 (93)
+++|.+++|+|+ +..+++++ .||.|++||..++..+.... ..+ . -+.++ |- ....+++|...|.+
T Consensus 154 ~sRvLslsw~~~----~~~i~~Gs-~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~L-rd~tI~sgDS~G~V 227 (691)
T KOG2048|consen 154 KSRVLSLSWNPT----GTKIAGGS-IDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFL-RDSTIASGDSAGTV 227 (691)
T ss_pred cceEEEEEecCC----ccEEEecc-cCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEe-ecCcEEEecCCceE
Confidence 589999999998 66677755 69999999999887765221 111 1 23344 33 56789999999999
Q ss_pred EEEeCCCCceeeEecCc
Q psy14456 74 RFWDLRTRGCTNVLTPI 90 (93)
Q Consensus 74 ~~~d~~~~~~~~~~~~~ 90 (93)
.+||...+..++.+..|
T Consensus 228 ~FWd~~~gTLiqS~~~h 244 (691)
T KOG2048|consen 228 TFWDSIFGTLIQSHSCH 244 (691)
T ss_pred EEEcccCcchhhhhhhh
Confidence 99999998877776654
No 178
>KOG1188|consensus
Probab=98.85 E-value=2.1e-08 Score=57.92 Aligned_cols=35 Identities=29% Similarity=0.429 Sum_probs=31.1
Q ss_pred eccccceEEE-Eec-CCCEEEEecCCCcEEEEeCCCC
Q psy14456 47 SGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 47 ~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d~~~~ 81 (93)
..|...|+++ |+| +++++++|+.||.+.++|+...
T Consensus 162 eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d 198 (376)
T KOG1188|consen 162 ESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKD 198 (376)
T ss_pred hhccCcceeEEecCCCCCeEEeecccceEEeeecCCC
Confidence 3588899999 999 7889999999999999998864
No 179
>KOG1524|consensus
Probab=98.83 E-value=1.7e-08 Score=61.59 Aligned_cols=83 Identities=20% Similarity=0.289 Sum_probs=62.9
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC----------------------------------------Cc
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT----------------------------------------GQ 41 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~----------------------------------------~~ 41 (93)
|.+.+.+-.|+|+ +.-++++| +||.|++|.-.- ..
T Consensus 103 H~~A~~~gRW~~d----GtgLlt~G-EDG~iKiWSrsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g~h~~IKpL~~n~ 177 (737)
T KOG1524|consen 103 HAAAISSGRWSPD----GAGLLTAG-EDGVIKIWSRSGMLRSTVVQNEESIRCARWAPNSNSIVFCQGGHISIKPLAANS 177 (737)
T ss_pred hhhhhhhcccCCC----Cceeeeec-CCceEEEEeccchHHHHHhhcCceeEEEEECCCCCceEEecCCeEEEeeccccc
Confidence 7788888889998 66788888 699999996310 01
Q ss_pred eeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEecCc
Q psy14456 42 AFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLTPI 90 (93)
Q Consensus 42 ~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~ 90 (93)
.+-.++.|.+-+.++ |++...++++|+.|-..++||-. |+.+..-..|
T Consensus 178 k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~-G~~Lf~S~~~ 226 (737)
T KOG1524|consen 178 KIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQ-GANLFTSAAE 226 (737)
T ss_pred ceeEEeccCcEEEEeecCccccceeecCCceeEEeeccc-CcccccCChh
Confidence 234556789999999 99999999999999999999964 4444443333
No 180
>KOG1063|consensus
Probab=98.83 E-value=3.3e-08 Score=61.50 Aligned_cols=76 Identities=28% Similarity=0.318 Sum_probs=63.7
Q ss_pred CccceeEEEEEecCCCCcceEEEeee----CCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGA----GDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFW 76 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~----~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~ 76 (93)
|.-.|++++.+|+ ++++++++. +...|++|+.......+.+.+|.-.|+.+ |+|++.+|++.+.|+++.+|
T Consensus 524 HGyEv~~l~~s~~----gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~ 599 (764)
T KOG1063|consen 524 HGYEVYALAISPT----GNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLY 599 (764)
T ss_pred CceeEEEEEecCC----CCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCceEEee
Confidence 6678999999998 777777651 13347899988877778899999999999 99999999999999999999
Q ss_pred eCCCC
Q psy14456 77 DLRTR 81 (93)
Q Consensus 77 d~~~~ 81 (93)
.....
T Consensus 600 ~~~~~ 604 (764)
T KOG1063|consen 600 EVQED 604 (764)
T ss_pred eeecc
Confidence 87543
No 181
>KOG4227|consensus
Probab=98.83 E-value=3.8e-08 Score=58.26 Aligned_cols=82 Identities=23% Similarity=0.343 Sum_probs=68.1
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC------CceeEEe-eccccceEEE-EecCCCEEEEecCCCcE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT------GQAFQAL-SGHSGHVLSL-YNWGGATVLSGSHDRTV 73 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~------~~~~~~~-~~~~~~v~~~-~~~~~~~~~s~~~~~~i 73 (93)
|++-|.++.|+.+ +++++++| .|-.+++|.++. .+++... ..|.+.|.++ |......+.+|..++++
T Consensus 55 H~GCiNAlqFS~N----~~~L~SGG-DD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~V 129 (609)
T KOG4227|consen 55 HTGCINALQFSHN----DRFLASGG-DDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTV 129 (609)
T ss_pred hccccceeeeccC----CeEEeecC-CcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCccee
Confidence 7788999999987 78888888 599999999752 2444433 2466899999 99999999999999999
Q ss_pred EEEeCCCCceeeEec
Q psy14456 74 RFWDLRTRGCTNVLT 88 (93)
Q Consensus 74 ~~~d~~~~~~~~~~~ 88 (93)
++.|+++.+.+.++.
T Consensus 130 I~HDiEt~qsi~V~~ 144 (609)
T KOG4227|consen 130 IKHDIETKQSIYVAN 144 (609)
T ss_pred Eeeecccceeeeeec
Confidence 999999998887764
No 182
>KOG2919|consensus
Probab=98.82 E-value=4.1e-08 Score=56.67 Aligned_cols=74 Identities=24% Similarity=0.408 Sum_probs=63.9
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEec-CCCcEEEEeCCCC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGS-HDRTVRFWDLRTR 81 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~-~~~~i~~~d~~~~ 81 (93)
+-+.|++|+|. ....++.|+-...+-+|.-..+.++..+-+|.+.|+.+ |.++|+.+++|+ .+-.|.+||+|..
T Consensus 208 giisc~a~sP~----~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~ 283 (406)
T KOG2919|consen 208 GIISCFAFSPM----DSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYS 283 (406)
T ss_pred ceeeeeeccCC----CCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhc
Confidence 55889999998 56566667678889999888888899899999999999 999999999887 6789999999964
No 183
>KOG4714|consensus
Probab=98.82 E-value=3.7e-09 Score=59.26 Aligned_cols=72 Identities=18% Similarity=0.294 Sum_probs=60.1
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCcee-EEeeccccceEEE-Eec-CCCEEEEecCCCcEEEEeCCC
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAF-QALSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d~~~ 80 (93)
.|.+++-+|. .+.++++|.++|.+.+||.+..... -.++.|+.++.-+ |+| ++..+++++.||.+..||..+
T Consensus 181 ~v~~l~~hp~----qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 181 AVTALCSHPA----QQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred cchhhhCCcc----cccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 4778888887 6777777878999999999876443 3457899999999 999 688999999999999999874
No 184
>KOG1273|consensus
Probab=98.82 E-value=8.9e-08 Score=55.20 Aligned_cols=71 Identities=14% Similarity=0.259 Sum_probs=52.5
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecC-CCEEEEecCCCcEEEEeC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG-GATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~-~~~~~s~~~~~~i~~~d~ 78 (93)
|..+|++++|+++ +++++++. +|..+.+||+..|.+++.+. -.++|... |+|. .++++..-.+..-.+-++
T Consensus 64 H~~pi~sl~WS~d----gr~LltsS-~D~si~lwDl~~gs~l~rir-f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~ 136 (405)
T KOG1273|consen 64 HVRPITSLCWSRD----GRKLLTSS-RDWSIKLWDLLKGSPLKRIR-FDSPVWGAQWHPRKRNKCVATIMEESPVVIDF 136 (405)
T ss_pred cccceeEEEecCC----CCEeeeec-CCceeEEEeccCCCceeEEE-ccCccceeeeccccCCeEEEEEecCCcEEEEe
Confidence 7889999999999 88999886 79999999999999888775 56677777 8773 344444434433333333
No 185
>KOG4378|consensus
Probab=98.80 E-value=3.7e-08 Score=59.63 Aligned_cols=77 Identities=17% Similarity=0.244 Sum_probs=61.7
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEe-eccccceEEE-Eec-CCCEEEEecCCCcEEEEeCCC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQAL-SGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~-~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d~~~ 80 (93)
..|.-+.|+|. .+.++.+.+.+|.|.+||+....++..+ ..|.++...+ |+| ...++++.+.|..|.+||.+.
T Consensus 165 qsvRll~ys~s----kr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s 240 (673)
T KOG4378|consen 165 QSVRLLRYSPS----KRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRS 240 (673)
T ss_pred CeEEEeecccc----cceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeeccc
Confidence 35668899998 5555555557999999999988877655 5788898889 999 566788999999999999996
Q ss_pred Ccee
Q psy14456 81 RGCT 84 (93)
Q Consensus 81 ~~~~ 84 (93)
....
T Consensus 241 ~~s~ 244 (673)
T KOG4378|consen 241 QAST 244 (673)
T ss_pred cccc
Confidence 5443
No 186
>KOG2055|consensus
Probab=98.80 E-value=1.4e-07 Score=56.50 Aligned_cols=73 Identities=23% Similarity=0.386 Sum_probs=57.8
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccc-eEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGH-VLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~-v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
.+.|..+.|+.+ +..++++|. +|.|.+||++...+++.+....+. -..+ .++++.++++|+..|.+++||..+
T Consensus 344 eG~v~~~~fsSd----sk~l~~~~~-~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s 418 (514)
T KOG2055|consen 344 EGVVSDFTFSSD----SKELLASGG-TGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNS 418 (514)
T ss_pred ccEEeeEEEecC----CcEEEEEcC-CceEEEEecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccch
Confidence 467899999977 677888774 999999999999999888632221 1233 467899999999999999999764
No 187
>KOG4547|consensus
Probab=98.80 E-value=1.3e-07 Score=57.62 Aligned_cols=85 Identities=22% Similarity=0.234 Sum_probs=72.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|-+.|.++.++.. ..-+.++|. |+.+..|+....+.++.+...+..+.++ .++++..+++++ ++|.+||+++
T Consensus 101 h~~~v~~~~~~~~----~~ciyS~~a-d~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~as--~~ik~~~~~~ 173 (541)
T KOG4547|consen 101 HYGNVNEILDAQR----LGCIYSVGA-DLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLTAS--RQIKVLDIET 173 (541)
T ss_pred CCCcceeeecccc----cCceEecCC-ceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEecc--ceEEEEEccC
Confidence 5677888887766 566788884 9999999999999999998888888888 899988888775 6999999999
Q ss_pred CceeeEecCccCC
Q psy14456 81 RGCTNVLTPITVP 93 (93)
Q Consensus 81 ~~~~~~~~~~~~~ 93 (93)
++.+..|.+|..|
T Consensus 174 kevv~~ftgh~s~ 186 (541)
T KOG4547|consen 174 KEVVITFTGHGSP 186 (541)
T ss_pred ceEEEEecCCCcc
Confidence 9999999999754
No 188
>KOG0270|consensus
Probab=98.77 E-value=2.3e-07 Score=55.24 Aligned_cols=86 Identities=20% Similarity=0.290 Sum_probs=63.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCce-eEEeeccccceEEE-Eec-CCCEEEEecCCCcEEEEeC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQA-FQALSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d~ 78 (93)
|++.|.++.|+|.. ...+++ |+.|+++.+.|.+.... -..++ -.+.|-.+ |.+ ....++.+..||.++-+|+
T Consensus 285 ~~k~Vq~l~wh~~~---p~~LLs-Gs~D~~V~l~D~R~~~~s~~~wk-~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~ 359 (463)
T KOG0270|consen 285 HGKKVQTLEWHPYE---PSVLLS-GSYDGTVALKDCRDPSNSGKEWK-FDGEVEKVAWDPHSENSFFVSTDDGTVYYFDI 359 (463)
T ss_pred cCCceeEEEecCCC---ceEEEe-ccccceEEeeeccCccccCceEE-eccceEEEEecCCCceeEEEecCCceEEeeec
Confidence 78899999999984 455555 55799999999985322 22232 34556667 877 4567778889999999999
Q ss_pred CCC-ceeeEecCccC
Q psy14456 79 RTR-GCTNVLTPITV 92 (93)
Q Consensus 79 ~~~-~~~~~~~~~~~ 92 (93)
|+. +++..+..|..
T Consensus 360 R~~~~~vwt~~AHd~ 374 (463)
T KOG0270|consen 360 RNPGKPVWTLKAHDD 374 (463)
T ss_pred CCCCCceeEEEeccC
Confidence 975 78888877754
No 189
>KOG0650|consensus
Probab=98.76 E-value=1.2e-07 Score=58.43 Aligned_cols=71 Identities=23% Similarity=0.296 Sum_probs=54.3
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCC-EEEEecCCCcEEEEeC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGA-TVLSGSHDRTVRFWDL 78 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~-~~~s~~~~~~i~~~d~ 78 (93)
|++.|.+++..|. +.++++++ .||+|++|.+.++.|+..+. -.+.|.++ |+|.+. .++.++.+..+.+.+.
T Consensus 399 Htg~Vr~iSvdp~----G~wlasGs-dDGtvriWEi~TgRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp 471 (733)
T KOG0650|consen 399 HTGLVRSISVDPS----GEWLASGS-DDGTVRIWEIATGRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVGECVLIVNP 471 (733)
T ss_pred cCCeEEEEEecCC----cceeeecC-CCCcEEEEEeecceEEEEEe-ecceeEEEEecCCCCceeEEEEecCceEEeCc
Confidence 8999999999997 78888766 69999999999999998875 45688999 999654 2333444444555443
No 190
>KOG1036|consensus
Probab=98.75 E-value=3.2e-08 Score=56.41 Aligned_cols=60 Identities=18% Similarity=0.283 Sum_probs=52.9
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecC
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSH 69 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~ 69 (93)
+|.+++|+|- ...++++|+ ||.|.+||+...+.++.+......|..+ |+.+|..|+.++.
T Consensus 234 PVNai~Fhp~----~~tfaTgGs-DG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~LAia~s 294 (323)
T KOG1036|consen 234 PVNAIAFHPI----HGTFATGGS-DGIVNIWDLFNRKRLKQLAKYETSISSLSFSMDGSLLAIASS 294 (323)
T ss_pred EeceeEeccc----cceEEecCC-CceEEEccCcchhhhhhccCCCCceEEEEeccCCCeEEEEec
Confidence 6899999997 678999996 9999999999998888887777778899 9999999987753
No 191
>KOG3881|consensus
Probab=98.75 E-value=4.6e-08 Score=57.34 Aligned_cols=76 Identities=20% Similarity=0.296 Sum_probs=64.2
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEE-eeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQA-LSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~-~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~ 81 (93)
.+++++...|. ++.++++. ..+.+..+|.+.+..+.. +++..+.+..+ .+|...++++++.|+.++++|+++.
T Consensus 248 ~~is~~~l~p~----gn~Iy~gn-~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktr 322 (412)
T KOG3881|consen 248 NPISSTGLTPS----GNFIYTGN-TKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTR 322 (412)
T ss_pred CcceeeeecCC----CcEEEEec-ccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccc
Confidence 46777777777 67777765 599999999999988765 78899999999 9999999999999999999999985
Q ss_pred cee
Q psy14456 82 GCT 84 (93)
Q Consensus 82 ~~~ 84 (93)
..+
T Consensus 323 kll 325 (412)
T KOG3881|consen 323 KLL 325 (412)
T ss_pred hhh
Confidence 443
No 192
>KOG0280|consensus
Probab=98.72 E-value=1.7e-07 Score=53.45 Aligned_cols=75 Identities=21% Similarity=0.259 Sum_probs=55.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCC-CCceeEE-eeccccceEEE-Eec-CCCEEEEecCCCcEEEEe
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCA-TGQAFQA-LSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~~~-~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d 77 (93)
|.-......|+..+ .+.+.++| .|+.+..||++ .+..+.. .+.|...|.++ -+| .+..++||+.|..+++||
T Consensus 164 He~E~Wta~f~~~~---pnlvytGg-DD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~D 239 (339)
T KOG0280|consen 164 HEFEAWTAKFSDKE---PNLVYTGG-DDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLD 239 (339)
T ss_pred cceeeeeeecccCC---CceEEecC-CCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeee
Confidence 44455566666553 45566665 69999999998 3444433 56788999999 555 788999999999999999
Q ss_pred CCC
Q psy14456 78 LRT 80 (93)
Q Consensus 78 ~~~ 80 (93)
.|.
T Consensus 240 tRn 242 (339)
T KOG0280|consen 240 TRN 242 (339)
T ss_pred hhc
Confidence 984
No 193
>KOG2048|consensus
Probab=98.69 E-value=6.4e-07 Score=55.76 Aligned_cols=79 Identities=23% Similarity=0.452 Sum_probs=62.0
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeE--EeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQ--ALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~--~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
++|..++.+|. +..+ +.|++||.+..++...+.... .+.-.++.+.++ |++++..+++|+.|+.|++||..+
T Consensus 111 g~IWsiai~p~----~~~l-~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~ 185 (691)
T KOG2048|consen 111 GAIWSIAINPE----NTIL-AIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKS 185 (691)
T ss_pred cceeEEEeCCc----cceE-EeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCC
Confidence 57888898887 4444 445579988887777776543 334456899999 999999999999999999999999
Q ss_pred CceeeEe
Q psy14456 81 RGCTNVL 87 (93)
Q Consensus 81 ~~~~~~~ 87 (93)
+..+...
T Consensus 186 ~~t~~~~ 192 (691)
T KOG2048|consen 186 GQTLHII 192 (691)
T ss_pred CceEEEe
Confidence 9877633
No 194
>KOG1963|consensus
Probab=98.69 E-value=2.6e-07 Score=58.56 Aligned_cols=76 Identities=26% Similarity=0.364 Sum_probs=62.9
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC--C--ceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT--G--QAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFW 76 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~--~--~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~ 76 (93)
|+-.++|.+++|. ++.++++. .||.|.+|.-.. + .....+.-|.++|.++ |+++|.++++|+..+-+-+|
T Consensus 204 Htf~~t~~~~spn----~~~~Aa~d-~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~W 278 (792)
T KOG1963|consen 204 HTFNITCVALSPN----ERYLAAGD-SDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLW 278 (792)
T ss_pred hcccceeEEeccc----cceEEEec-cCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEE
Confidence 6667899999998 67777766 599999997432 1 2245667899999999 99999999999999999999
Q ss_pred eCCCCc
Q psy14456 77 DLRTRG 82 (93)
Q Consensus 77 d~~~~~ 82 (93)
.+.++.
T Consensus 279 q~~T~~ 284 (792)
T KOG1963|consen 279 QLETGK 284 (792)
T ss_pred eecCCC
Confidence 999876
No 195
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.69 E-value=6.2e-07 Score=55.04 Aligned_cols=73 Identities=18% Similarity=0.169 Sum_probs=56.8
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCC
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~ 81 (93)
++.|.|++++|+ .++++.++ .||.|.+||...+..... ...-....+ |+|++..++.|+..|.+.+||..-+
T Consensus 259 ~s~v~~ca~sp~----E~kLvlGC-~DgSiiLyD~~~~~t~~~--ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALs 331 (545)
T PF11768_consen 259 PSQVICCARSPS----EDKLVLGC-EDGSIILYDTTRGVTLLA--KAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALS 331 (545)
T ss_pred CCcceEEecCcc----cceEEEEe-cCCeEEEEEcCCCeeeee--eecccceEEEEcCCCcEEEEEcCCceEEEEEeecC
Confidence 467899999998 67777766 699999999877644322 222334567 9999999999999999999998754
Q ss_pred c
Q psy14456 82 G 82 (93)
Q Consensus 82 ~ 82 (93)
.
T Consensus 332 p 332 (545)
T PF11768_consen 332 P 332 (545)
T ss_pred c
Confidence 3
No 196
>KOG0974|consensus
Probab=98.68 E-value=2.1e-07 Score=59.94 Aligned_cols=81 Identities=19% Similarity=0.248 Sum_probs=65.1
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeE-EeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQ-ALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~-~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
|.+.+..+.|+.+ +.++++.. +|..+++|++++.+... ...+|.+.+..+ |.+. .+++++.|.+.++|+..
T Consensus 174 HeG~iF~i~~s~d----g~~i~s~S-dDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~ 246 (967)
T KOG0974|consen 174 HEGSIFSIVTSLD----GRYIASVS-DDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGVN 246 (967)
T ss_pred cCCceEEEEEccC----CcEEEEEe-cCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEEEecc
Confidence 8899999999988 78888876 69999999999887754 667899999888 7766 89999999999999543
Q ss_pred CCceeeEecCc
Q psy14456 80 TRGCTNVLTPI 90 (93)
Q Consensus 80 ~~~~~~~~~~~ 90 (93)
+..+..+.+|
T Consensus 247 -~~~l~~y~~h 256 (967)
T KOG0974|consen 247 -GTQLEVYDEH 256 (967)
T ss_pred -cceehhhhhh
Confidence 3333344433
No 197
>KOG2139|consensus
Probab=98.68 E-value=2.6e-07 Score=54.14 Aligned_cols=72 Identities=22% Similarity=0.402 Sum_probs=57.2
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
.+|+.+.|.++ +..++++.-.+..+.+||..++..+....-.-+.+.-+ |+|++.+++.+..|+..++|+..
T Consensus 196 ~pVtsmqwn~d----gt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~ 268 (445)
T KOG2139|consen 196 NPVTSMQWNED----GTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQEN 268 (445)
T ss_pred ceeeEEEEcCC----CCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehhc
Confidence 57999999999 56667666569999999999887654332234566677 99999999999999999999433
No 198
>KOG2695|consensus
Probab=98.67 E-value=7.7e-08 Score=55.98 Aligned_cols=83 Identities=18% Similarity=0.243 Sum_probs=62.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCce---eEEeeccccceEEE---EecCCCEEEEecCCCcEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQA---FQALSGHSGHVLSL---YNWGGATVLSGSHDRTVRF 75 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~---~~~~~~~~~~v~~~---~~~~~~~~~s~~~~~~i~~ 75 (93)
|.+.|+++..-... .+++++++ .+|.|.+||.+-.++ +....+|.+...-+ .++....+++++.|...++
T Consensus 297 h~Ssvtslq~Lq~s---~q~LmaS~-M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRi 372 (425)
T KOG2695|consen 297 HDSSVTSLQILQFS---QQKLMASD-MTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRI 372 (425)
T ss_pred cCcchhhhhhhccc---cceEeecc-CcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEE
Confidence 66777777765522 67788887 499999999987666 77778887644333 4556678888999999999
Q ss_pred EeCCCCceeeEec
Q psy14456 76 WDLRTRGCTNVLT 88 (93)
Q Consensus 76 ~d~~~~~~~~~~~ 88 (93)
|.++.+..+.++.
T Consensus 373 Wsl~~ghLl~tip 385 (425)
T KOG2695|consen 373 WSLDSGHLLCTIP 385 (425)
T ss_pred EecccCceeeccC
Confidence 9999987766653
No 199
>KOG1587|consensus
Probab=98.66 E-value=7.3e-08 Score=59.61 Aligned_cols=76 Identities=16% Similarity=0.117 Sum_probs=62.3
Q ss_pred CCccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCC-CCceeEEeeccccceEEE-Eec-CCCEEEEecCCCcEEEEe
Q psy14456 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCA-TGQAFQALSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d 77 (93)
.|-++|+++.++|- ..+++.++. |..+++|... ...++..+..+...+.++ |+| ....++++..||.+.+||
T Consensus 396 ~h~g~v~~v~~nPF----~~k~fls~g-DW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWD 470 (555)
T KOG1587|consen 396 THIGPVYAVSRNPF----YPKNFLSVG-DWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWD 470 (555)
T ss_pred ccCcceEeeecCCC----ccceeeeec-cceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhh
Confidence 47789999999998 455444443 9999999987 667777777777889999 999 567888999999999999
Q ss_pred CCCC
Q psy14456 78 LRTR 81 (93)
Q Consensus 78 ~~~~ 81 (93)
+...
T Consensus 471 Ll~~ 474 (555)
T KOG1587|consen 471 LLQD 474 (555)
T ss_pred hhcc
Confidence 9864
No 200
>KOG0649|consensus
Probab=98.65 E-value=5e-07 Score=50.68 Aligned_cols=82 Identities=18% Similarity=0.278 Sum_probs=59.7
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC-------ceeE-Eeecc-----ccceEEE-EecCCCEEEEe
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG-------QAFQ-ALSGH-----SGHVLSL-YNWGGATVLSG 67 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~-------~~~~-~~~~~-----~~~v~~~-~~~~~~~~~s~ 67 (93)
|.++|+.++|.. ..++++| ||.|+-|.-+.. .... ...-| ...|+.+ ..|..+.++.+
T Consensus 61 hdgpiy~~~f~d------~~Lls~g--dG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~A 132 (325)
T KOG0649|consen 61 HDGPIYYLAFHD------DFLLSGG--DGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFA 132 (325)
T ss_pred cCCCeeeeeeeh------hheeecc--CceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEe
Confidence 788999999984 3566665 799998764321 1111 11112 2357788 88877777777
Q ss_pred cCCCcEEEEeCCCCceeeEecCcc
Q psy14456 68 SHDRTVRFWDLRTRGCTNVLTPIT 91 (93)
Q Consensus 68 ~~~~~i~~~d~~~~~~~~~~~~~~ 91 (93)
+.|+.+..||+++|...+.+++|+
T Consensus 133 gGD~~~y~~dlE~G~i~r~~rGHt 156 (325)
T KOG0649|consen 133 GGDGVIYQVDLEDGRIQREYRGHT 156 (325)
T ss_pred cCCeEEEEEEecCCEEEEEEcCCc
Confidence 799999999999999999999986
No 201
>KOG2096|consensus
Probab=98.64 E-value=1.5e-07 Score=54.46 Aligned_cols=70 Identities=21% Similarity=0.325 Sum_probs=57.7
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCC---CC-----ceeEEeeccccceEEE-EecCCCEEEEecCCCcEEE
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCA---TG-----QAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~---~~-----~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~ 75 (93)
.-+..+.+|+ +++++++| --.-|.+|.+- .| ..+..+++|.+.+... |+++...+++.+.||..++
T Consensus 230 ~n~~aavSP~----GRFia~~g-FTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wri 304 (420)
T KOG2096|consen 230 SNYDAAVSPD----GRFIAVSG-FTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRI 304 (420)
T ss_pred cccceeeCCC----CcEEEEec-CCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEE
Confidence 3456778898 88888888 47889999863 22 3356789999999999 9999999999999999999
Q ss_pred EeCC
Q psy14456 76 WDLR 79 (93)
Q Consensus 76 ~d~~ 79 (93)
||..
T Consensus 305 wdtd 308 (420)
T KOG2096|consen 305 WDTD 308 (420)
T ss_pred eecc
Confidence 9865
No 202
>KOG2106|consensus
Probab=98.61 E-value=8.4e-07 Score=53.99 Aligned_cols=67 Identities=30% Similarity=0.505 Sum_probs=54.5
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEe
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d 77 (93)
..|.|++|.++ ++ ++++.+ +|.+.+|+..+.+..+....|.+.|.++ .--+|.++ +|+.|+.|..||
T Consensus 247 k~Vl~v~F~en----gd-viTgDS-~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~Gtll-SGgKDRki~~Wd 314 (626)
T KOG2106|consen 247 KFVLCVTFLEN----GD-VITGDS-GGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGTLL-SGGKDRKIILWD 314 (626)
T ss_pred eEEEEEEEcCC----CC-EEeecC-CceEEEEeCCCceEEeEeeecCCceEEEEEecCccEe-ecCccceEEecc
Confidence 46899999987 34 566654 9999999998777666666899999999 77777655 599999999998
No 203
>KOG1310|consensus
Probab=98.61 E-value=1.8e-07 Score=57.43 Aligned_cols=76 Identities=29% Similarity=0.397 Sum_probs=61.4
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC----------ceeEEeeccccceEEE-EecCC-CEEEEecC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG----------QAFQALSGHSGHVLSL-YNWGG-ATVLSGSH 69 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~----------~~~~~~~~~~~~v~~~-~~~~~-~~~~s~~~ 69 (93)
|++.|.++.|.|.. ++.++.+|..|..|+++|+... .....+..|...+..+ -.|++ +.+-+++.
T Consensus 92 HtaNIFsvKFvP~t---nnriv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasE 168 (758)
T KOG1310|consen 92 HTANIFSVKFVPYT---NNRIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASE 168 (758)
T ss_pred cccceeEEeeeccC---CCeEEEeccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecC
Confidence 78899999999986 4556666667999999998741 3345667788888888 77755 78889999
Q ss_pred CCcEEEEeCCC
Q psy14456 70 DRTVRFWDLRT 80 (93)
Q Consensus 70 ~~~i~~~d~~~ 80 (93)
||+++.+|++.
T Consensus 169 DGtirQyDiRE 179 (758)
T KOG1310|consen 169 DGTIRQYDIRE 179 (758)
T ss_pred CcceeeecccC
Confidence 99999999986
No 204
>KOG1587|consensus
Probab=98.60 E-value=5.5e-07 Score=55.86 Aligned_cols=74 Identities=20% Similarity=0.233 Sum_probs=56.7
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCce--eEE----eeccccceEEE-EecCC--CEEEEecCCCcE
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQA--FQA----LSGHSGHVLSL-YNWGG--ATVLSGSHDRTV 73 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~--~~~----~~~~~~~v~~~-~~~~~--~~~~s~~~~~~i 73 (93)
...|.|+.|+|. ...++++|+.+|.|.+||++.+.. ... ...|...+..+ |-.+. .-+++++.||.|
T Consensus 242 ~s~v~~~~f~p~----~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i 317 (555)
T KOG1587|consen 242 PSEVTCLKFCPF----DPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSI 317 (555)
T ss_pred CCceeEEEeccC----CcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcE
Confidence 467999999998 566777777899999999987644 222 23577888888 75543 458999999999
Q ss_pred EEEeCCC
Q psy14456 74 RFWDLRT 80 (93)
Q Consensus 74 ~~~d~~~ 80 (93)
..|+++.
T Consensus 318 ~~W~~~~ 324 (555)
T KOG1587|consen 318 CSWDTDM 324 (555)
T ss_pred eeeeccc
Confidence 9998764
No 205
>KOG0644|consensus
Probab=98.57 E-value=1.9e-08 Score=63.93 Aligned_cols=69 Identities=30% Similarity=0.538 Sum_probs=57.9
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
|.+.++.++.+.. +.++++++.|..|++|.+.++.++..+.+|++.|+.+ |+|.. +.+.|+++.+||.+
T Consensus 231 hs~ditdlavs~~-----n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r 300 (1113)
T KOG0644|consen 231 HSGDITDLAVSSN-----NTMIAAASNDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDAR 300 (1113)
T ss_pred Cccccchhccchh-----hhhhhhcccCceEEEEecCCCchHHHHhccccceeeeccCccc----cCCCCCceEecccc
Confidence 6677888887654 4455555669999999999999999999999999999 99865 55789999999998
No 206
>KOG1963|consensus
Probab=98.57 E-value=8.8e-07 Score=56.28 Aligned_cols=82 Identities=17% Similarity=0.219 Sum_probs=65.2
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|...|.+++|+++ +.+++++| +.+.+-+|.+.+++ .+-+.--.+++..+ ++|++.+.+....|..|.+....+
T Consensus 250 H~~~V~~L~fS~~----G~~LlSGG-~E~VLv~Wq~~T~~-kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~d 323 (792)
T KOG1963|consen 250 HHDEVNSLSFSSD----GAYLLSGG-REGVLVLWQLETGK-KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASD 323 (792)
T ss_pred cccccceeEEecC----CceEeecc-cceEEEEEeecCCC-cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccc
Confidence 6789999999999 78999999 79999999999988 33334445688888 999999999888999998887655
Q ss_pred CceeeEecC
Q psy14456 81 RGCTNVLTP 89 (93)
Q Consensus 81 ~~~~~~~~~ 89 (93)
-....++.+
T Consensus 324 l~~k~tIsg 332 (792)
T KOG1963|consen 324 LEIKSTISG 332 (792)
T ss_pred hhhhhhccC
Confidence 444444433
No 207
>KOG2055|consensus
Probab=98.57 E-value=9.4e-07 Score=53.11 Aligned_cols=77 Identities=17% Similarity=0.339 Sum_probs=65.4
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCcee
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCT 84 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~ 84 (93)
+.....+++ +++++..| ..|.|.+....+++.+..++ -.+.+..+ |+.++..+..++.+|.|.+||+++..++
T Consensus 306 ~e~FeVShd----~~fia~~G-~~G~I~lLhakT~eli~s~K-ieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~ 379 (514)
T KOG2055|consen 306 MERFEVSHD----SNFIAIAG-NNGHIHLLHAKTKELITSFK-IEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCL 379 (514)
T ss_pred hheeEecCC----CCeEEEcc-cCceEEeehhhhhhhhheee-eccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceE
Confidence 445566777 78889989 59999999999999888876 56788888 9999999988889999999999999888
Q ss_pred eEec
Q psy14456 85 NVLT 88 (93)
Q Consensus 85 ~~~~ 88 (93)
+.+.
T Consensus 380 ~rf~ 383 (514)
T KOG2055|consen 380 HRFV 383 (514)
T ss_pred EEEe
Confidence 8775
No 208
>KOG2111|consensus
Probab=98.56 E-value=2.4e-06 Score=49.29 Aligned_cols=72 Identities=21% Similarity=0.259 Sum_probs=59.6
Q ss_pred cceEEEeeeCCCeEEEEeCCCCce--eEEeeccccceEEE-EecCCCEEEEecCCCc-EEEEeCCCCceeeEecCc
Q psy14456 19 SSLLISGGAGDCKIYVTDCATGQA--FQALSGHSGHVLSL-YNWGGATVLSGSHDRT-VRFWDLRTRGCTNVLTPI 90 (93)
Q Consensus 19 ~~~~~~~g~~~~~v~~~~~~~~~~--~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~-i~~~d~~~~~~~~~~~~~ 90 (93)
...++.-|-+-|.|.+-|+..... ...+.+|.+.|.|+ .+.+|.+++|++..|+ |++||.++|..++.++..
T Consensus 148 k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG 223 (346)
T KOG2111|consen 148 KSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRG 223 (346)
T ss_pred ceEEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecC
Confidence 456666676789999999876554 46678999999999 9999999999998875 699999999999888753
No 209
>KOG1523|consensus
Probab=98.55 E-value=8.3e-07 Score=51.26 Aligned_cols=76 Identities=17% Similarity=0.167 Sum_probs=62.2
Q ss_pred CCccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC---ceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEE
Q psy14456 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG---QAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFW 76 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~---~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~ 76 (93)
+|...|++++|.|. .+.|++++ .|..-.+|....+ .....+.-++....++ |+|.++++++++..+.+.+|
T Consensus 53 ~Hd~~vtgvdWap~----snrIvtcs-~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVc 127 (361)
T KOG1523|consen 53 EHDKIVTGVDWAPK----SNRIVTCS-HDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVC 127 (361)
T ss_pred hhCcceeEEeecCC----CCceeEcc-CCCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEE
Confidence 47889999999998 78899987 6999999998443 3334455678888999 99999999999999999998
Q ss_pred eCCCC
Q psy14456 77 DLRTR 81 (93)
Q Consensus 77 d~~~~ 81 (93)
=++..
T Consensus 128 y~E~E 132 (361)
T KOG1523|consen 128 YYEQE 132 (361)
T ss_pred EEecc
Confidence 66543
No 210
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=98.55 E-value=2.9e-06 Score=49.32 Aligned_cols=77 Identities=39% Similarity=0.652 Sum_probs=61.1
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeE-EeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQ-ALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~-~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
|...|.+++|+|+ +..++.+++.|+.+++||...+.... .+.+|.... .. |.+++..+++++.|+.+++|+.+
T Consensus 197 ~~~~v~~~~~~~~----~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~ 271 (466)
T COG2319 197 HTDPVSSLAFSPD----GGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLR 271 (466)
T ss_pred CCCceEEEEEcCC----cceEEEEecCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeec
Confidence 6788999999987 55445543469999999988777777 677887775 44 88888888899999999999998
Q ss_pred CCce
Q psy14456 80 TRGC 83 (93)
Q Consensus 80 ~~~~ 83 (93)
....
T Consensus 272 ~~~~ 275 (466)
T COG2319 272 SSSS 275 (466)
T ss_pred CCCc
Confidence 6654
No 211
>KOG4227|consensus
Probab=98.51 E-value=2.7e-06 Score=50.70 Aligned_cols=76 Identities=21% Similarity=0.239 Sum_probs=63.3
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeec--cccceEEE-EecCCCEEEEecCCCcEEEEeC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSG--HSGHVLSL-YNWGGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~--~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~ 78 (93)
|.+.|.|++|.-. +.++++++ ++++|...|+++.+.+..+.. ..+.|+.+ .+|..+.+++.+.++.+.+||.
T Consensus 104 H~SNIF~L~F~~~----N~~~~SG~-~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~ 178 (609)
T KOG4227|consen 104 HRSNIFSLEFDLE----NRFLYSGE-RWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDN 178 (609)
T ss_pred cccceEEEEEccC----CeeEecCC-CcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEec
Confidence 5688999999876 67777777 699999999999988876642 23488888 8998888999999999999999
Q ss_pred CCCc
Q psy14456 79 RTRG 82 (93)
Q Consensus 79 ~~~~ 82 (93)
+..+
T Consensus 179 Rd~~ 182 (609)
T KOG4227|consen 179 RDRQ 182 (609)
T ss_pred cCCC
Confidence 8765
No 212
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.51 E-value=3.4e-06 Score=50.27 Aligned_cols=76 Identities=20% Similarity=0.188 Sum_probs=55.2
Q ss_pred EEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEec-CCCcEEEEeCCCCceee
Q psy14456 8 DVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGS-HDRTVRFWDLRTRGCTN 85 (93)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~-~~~~i~~~d~~~~~~~~ 85 (93)
.+.++|+ +++++.++ +|+.+.++|+.+.+.+..+..-.+ ...+ +++++++++.++ ..+.+.++|.++.+.++
T Consensus 41 ~~~~s~D----gr~~yv~~-rdg~vsviD~~~~~~v~~i~~G~~-~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~ 114 (369)
T PF02239_consen 41 GLKFSPD----GRYLYVAN-RDGTVSVIDLATGKVVATIKVGGN-PRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVK 114 (369)
T ss_dssp EEE-TT-----SSEEEEEE-TTSEEEEEETTSSSEEEEEE-SSE-EEEEEE--TTTEEEEEEEETTEEEEEETTT--EEE
T ss_pred EEEecCC----CCEEEEEc-CCCeEEEEECCcccEEEEEecCCC-cceEEEcCCCCEEEEEecCCCceeEecccccccee
Confidence 4567888 67777766 799999999999999888865444 3567 899999888665 78999999999988888
Q ss_pred EecC
Q psy14456 86 VLTP 89 (93)
Q Consensus 86 ~~~~ 89 (93)
.+..
T Consensus 115 ~I~~ 118 (369)
T PF02239_consen 115 TIPT 118 (369)
T ss_dssp EEE-
T ss_pred eccc
Confidence 7653
No 213
>KOG0771|consensus
Probab=98.49 E-value=1.5e-06 Score=51.39 Aligned_cols=81 Identities=27% Similarity=0.335 Sum_probs=62.2
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCce----------------------------e----------
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQA----------------------------F---------- 43 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~----------------------------~---------- 43 (93)
|.+.|.++.|+|+ ++++++.|. | ..++|+.+++.. +
T Consensus 185 ~~~eV~DL~FS~d----gk~lasig~-d-~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v 258 (398)
T KOG0771|consen 185 HHAEVKDLDFSPD----GKFLASIGA-D-SARVWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGV 258 (398)
T ss_pred hcCccccceeCCC----CcEEEEecC-C-ceEEEEeccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCce
Confidence 6789999999999 889999984 7 999999876510 0
Q ss_pred EE--e---e-----------ccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEec
Q psy14456 44 QA--L---S-----------GHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 44 ~~--~---~-----------~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~ 88 (93)
.. + . .....+.++ .+.+|.+++.|+.|+.|-+++..+-++++.+.
T Consensus 259 ~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk 320 (398)
T KOG0771|consen 259 RLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVK 320 (398)
T ss_pred eEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeeh
Confidence 00 0 0 012367788 89999999999999999999998877766654
No 214
>KOG2321|consensus
Probab=98.49 E-value=1.8e-06 Score=53.31 Aligned_cols=78 Identities=27% Similarity=0.335 Sum_probs=59.5
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEee------cccc-----ceEEE-EecCCCEEEEecCCC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALS------GHSG-----HVLSL-YNWGGATVLSGSHDR 71 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~------~~~~-----~v~~~-~~~~~~~~~s~~~~~ 71 (93)
+.+.++...+. ..++++++ .+|.|-.||.++.+.+..+. .|.+ .++++ |.-+|-.++.|..+|
T Consensus 176 ~~lN~v~in~~----hgLla~Gt-~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G 250 (703)
T KOG2321|consen 176 GELNVVSINEE----HGLLACGT-EDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTG 250 (703)
T ss_pred ccceeeeecCc----cceEEecc-cCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCC
Confidence 56788888776 45555544 79999999998876554443 1222 37888 988899999999999
Q ss_pred cEEEEeCCCCceeeE
Q psy14456 72 TVRFWDLRTRGCTNV 86 (93)
Q Consensus 72 ~i~~~d~~~~~~~~~ 86 (93)
.+.++|+++.+++..
T Consensus 251 ~v~iyDLRa~~pl~~ 265 (703)
T KOG2321|consen 251 SVLIYDLRASKPLLV 265 (703)
T ss_pred cEEEEEcccCCceee
Confidence 999999998876554
No 215
>KOG2139|consensus
Probab=98.46 E-value=2.7e-06 Score=50.04 Aligned_cols=79 Identities=19% Similarity=0.284 Sum_probs=56.3
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC----c--------eeE--EeeccccceEEE-EecCCCEEEEe
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG----Q--------AFQ--ALSGHSGHVLSL-YNWGGATVLSG 67 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~----~--------~~~--~~~~~~~~v~~~-~~~~~~~~~s~ 67 (93)
+..|+|++|.|.+ ++ .++.|+ .+-|.+|..... . +.. .-.+| ..|.++ |++++..++++
T Consensus 140 QrnvtclawRPls---as-elavgC-r~gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tA 213 (445)
T KOG2139|consen 140 QRNVTCLAWRPLS---AS-ELAVGC-RAGICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTA 213 (445)
T ss_pred hcceeEEEeccCC---cc-eeeeee-cceeEEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeec
Confidence 3579999999984 33 555565 778899976421 1 111 22233 678899 99999999988
Q ss_pred c-CCCcEEEEeCCCCceeeEe
Q psy14456 68 S-HDRTVRFWDLRTRGCTNVL 87 (93)
Q Consensus 68 ~-~~~~i~~~d~~~~~~~~~~ 87 (93)
+ .|+.+++||..+++++...
T Consensus 214 S~gsssi~iWdpdtg~~~pL~ 234 (445)
T KOG2139|consen 214 SFGSSSIMIWDPDTGQKIPLI 234 (445)
T ss_pred ccCcceEEEEcCCCCCccccc
Confidence 7 6789999999988765443
No 216
>KOG0650|consensus
Probab=98.44 E-value=9.6e-07 Score=54.70 Aligned_cols=48 Identities=33% Similarity=0.541 Sum_probs=43.4
Q ss_pred eeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEecC
Q psy14456 42 AFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLTP 89 (93)
Q Consensus 42 ~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~ 89 (93)
+-..+.+|++.+.++ ..+.|.++++|+.||++++|.+.+|.|++.+.-
T Consensus 392 ~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~ 440 (733)
T KOG0650|consen 392 CALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQF 440 (733)
T ss_pred eeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEee
Confidence 445668999999999 999999999999999999999999999988754
No 217
>KOG1409|consensus
Probab=98.42 E-value=1.1e-06 Score=51.30 Aligned_cols=75 Identities=24% Similarity=0.411 Sum_probs=59.9
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCce-eEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQA-FQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
|.+.+++++|.+. ...++++. .|..+.+||+--..- ...+.+|...+..+ ..+..+.+++++.|+.|.+||..
T Consensus 196 h~~~~~~l~Wd~~----~~~LfSg~-~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn 270 (404)
T KOG1409|consen 196 HTGEVTCLKWDPG----QRLLFSGA-SDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMN 270 (404)
T ss_pred cccceEEEEEcCC----CcEEEecc-ccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEecc
Confidence 7789999999986 55556654 699999999864433 45667899988888 66677889999999999999987
Q ss_pred CC
Q psy14456 80 TR 81 (93)
Q Consensus 80 ~~ 81 (93)
..
T Consensus 271 ~~ 272 (404)
T KOG1409|consen 271 VK 272 (404)
T ss_pred ce
Confidence 43
No 218
>KOG0974|consensus
Probab=98.36 E-value=8.7e-06 Score=52.92 Aligned_cols=72 Identities=25% Similarity=0.345 Sum_probs=56.9
Q ss_pred ceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceee-EecCcc
Q psy14456 20 SLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTN-VLTPIT 91 (93)
Q Consensus 20 ~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~-~~~~~~ 91 (93)
...+++|+--+.+.+|+.........+.+|.+.+..+ ++.++.++++++.|+.+++|++.+.+... ...+|+
T Consensus 145 ~~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHs 218 (967)
T KOG0974|consen 145 ELYIASGSVFGEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHS 218 (967)
T ss_pred EEEEEeccccccEEEEeccccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCccccccc
Confidence 4445556669999999987444444688999999999 99999999999999999999999877654 333443
No 219
>KOG1272|consensus
Probab=98.34 E-value=2e-06 Score=51.88 Aligned_cols=67 Identities=19% Similarity=0.265 Sum_probs=49.7
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFW 76 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~ 76 (93)
|.++|.++++.++ +.+++++|. |..++|||++.-..+.+... ..+...+ ++..+. +.++....+.+|
T Consensus 292 H~g~V~siAv~~~----G~YMaTtG~-Dr~~kIWDlR~~~ql~t~~t-p~~a~~ls~Sqkgl--LA~~~G~~v~iw 359 (545)
T KOG1272|consen 292 HRGPVSSIAVDRG----GRYMATTGL-DRKVKIWDLRNFYQLHTYRT-PHPASNLSLSQKGL--LALSYGDHVQIW 359 (545)
T ss_pred cCCCcceEEECCC----CcEEeeccc-ccceeEeeeccccccceeec-CCCccccccccccc--eeeecCCeeeee
Confidence 7899999999999 899999995 99999999987765555533 2334455 565553 344556678888
No 220
>KOG1523|consensus
Probab=98.33 E-value=6.6e-06 Score=47.68 Aligned_cols=74 Identities=14% Similarity=0.210 Sum_probs=61.7
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC---ceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeC
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG---QAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~---~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~ 78 (93)
.++|+|.+|.++ ...++.+- .+..+.||..... +...+++.|...++.+ |++..+.|++|+.|+.-.+|..
T Consensus 10 ~~pitchAwn~d----rt~iAv~~-~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~ 84 (361)
T KOG1523|consen 10 LEPITCHAWNSD----RTQIAVSP-NNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQ 84 (361)
T ss_pred cCceeeeeecCC----CceEEecc-CCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCcccccc
Confidence 368999999998 66666655 4789999987654 4567888999999999 9999999999999999999998
Q ss_pred CCC
Q psy14456 79 RTR 81 (93)
Q Consensus 79 ~~~ 81 (93)
..+
T Consensus 85 ~~~ 87 (361)
T KOG1523|consen 85 PSG 87 (361)
T ss_pred CCC
Confidence 544
No 221
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.33 E-value=4.6e-06 Score=32.43 Aligned_cols=37 Identities=35% Similarity=0.708 Sum_probs=30.9
Q ss_pred ceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEe
Q psy14456 41 QAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 41 ~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d 77 (93)
.....+..|...+.++ |.+.+..+++++.|+.+.+|+
T Consensus 3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 3455566788889999 998889999999999999996
No 222
>KOG2106|consensus
Probab=98.32 E-value=2.5e-05 Score=47.93 Aligned_cols=33 Identities=24% Similarity=0.473 Sum_probs=29.3
Q ss_pred ccceEEE-EecCCCEEEEecCCCcEEEEeCCCCc
Q psy14456 50 SGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRG 82 (93)
Q Consensus 50 ~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~ 82 (93)
++++.++ |+|+|..++.++.|+.|.+|-+..+.
T Consensus 447 ~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g 480 (626)
T KOG2106|consen 447 NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANG 480 (626)
T ss_pred CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCC
Confidence 6788999 99999999999999999999776543
No 223
>KOG1240|consensus
Probab=98.30 E-value=1.2e-05 Score=53.54 Aligned_cols=75 Identities=19% Similarity=0.233 Sum_probs=56.2
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC-------ceeEEeeccccceEEE-EecCCCEEEEecCCCcE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG-------QAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTV 73 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~-------~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i 73 (93)
|...|..++.++++ ++++++++ .||+|++|+.+.. ++..++..-.+.+.++ +...+..++.++.||.+
T Consensus 1047 hs~~v~k~a~s~~~---~s~FvsgS-~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG~v 1122 (1431)
T KOG1240|consen 1047 HSSAVIKLAVSSEH---TSLFVSGS-DDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDGSV 1122 (1431)
T ss_pred ccccccceeecCCC---CceEEEec-CCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCCCeE
Confidence 56778888888773 57777766 5999999998632 2333443345677777 78888999999999999
Q ss_pred EEEeCCC
Q psy14456 74 RFWDLRT 80 (93)
Q Consensus 74 ~~~d~~~ 80 (93)
.+.++..
T Consensus 1123 ~~~~id~ 1129 (1431)
T KOG1240|consen 1123 RVLRIDH 1129 (1431)
T ss_pred EEEEccc
Confidence 9998765
No 224
>KOG1538|consensus
Probab=98.23 E-value=1.5e-06 Score=54.80 Aligned_cols=32 Identities=28% Similarity=0.380 Sum_probs=28.1
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCA 38 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 38 (93)
|...|+|++|+.+ ++.++++++ |..|.+|...
T Consensus 52 HKDtVycVAys~d----GkrFASG~a-DK~VI~W~~k 83 (1081)
T KOG1538|consen 52 HKDTVYCVAYAKD----GKRFASGSA-DKSVIIWTSK 83 (1081)
T ss_pred ccceEEEEEEccC----CceeccCCC-ceeEEEeccc
Confidence 7889999999999 788888775 9999999864
No 225
>KOG2695|consensus
Probab=98.21 E-value=2.4e-06 Score=49.99 Aligned_cols=79 Identities=22% Similarity=0.355 Sum_probs=57.1
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC-----ceeEEeeccccceEEE--EecCCCEEEEecCCCcEEEEeC
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG-----QAFQALSGHSGHVLSL--YNWGGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~-----~~~~~~~~~~~~v~~~--~~~~~~~~~s~~~~~~i~~~d~ 78 (93)
|.++.|.-. .++++. |+++|.|...|++.+ .+...+ -|.+.++++ ..-+.+.+.+.++++.|.+||.
T Consensus 255 VfAlQf~~s----~nLv~~-GcRngeI~~iDLR~rnqG~~~~a~rl-yh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~ 328 (425)
T KOG2695|consen 255 VFALQFAGS----DNLVFN-GCRNGEIFVIDLRCRNQGNGWCAQRL-YHDSSVTSLQILQFSQQKLMASDMTGKIKLYDL 328 (425)
T ss_pred HHHHHhccc----CCeeEe-cccCCcEEEEEeeecccCCCcceEEE-EcCcchhhhhhhccccceEeeccCcCceeEeee
Confidence 444555443 344444 569999999999865 344444 377888887 3436788888899999999999
Q ss_pred CCCce---eeEecCc
Q psy14456 79 RTRGC---TNVLTPI 90 (93)
Q Consensus 79 ~~~~~---~~~~~~~ 90 (93)
+--++ ++.+++|
T Consensus 329 R~~K~~~~V~qYeGH 343 (425)
T KOG2695|consen 329 RATKCKKSVMQYEGH 343 (425)
T ss_pred hhhhcccceeeeecc
Confidence 97777 7777776
No 226
>KOG0322|consensus
Probab=98.20 E-value=5.2e-06 Score=47.11 Aligned_cols=85 Identities=19% Similarity=0.208 Sum_probs=61.4
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC--ce--eEEeeccccceEEE-EecCCCEEEEecCCCcEEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG--QA--FQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFW 76 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~--~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~ 76 (93)
|.++|.++.|.+. -+.-+.+| -+-.+.+|.++.. .+ ...+.-.+-.+..+ .-||+..++|++.|+.+++|
T Consensus 204 h~qpvlsldyas~----~~rGisgg-a~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVy 278 (323)
T KOG0322|consen 204 HKQPVLSLDYASS----CDRGISGG-ADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVY 278 (323)
T ss_pred ccCcceeeeechh----hcCCcCCC-ccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEE
Confidence 6788999999876 33445555 4778888887643 22 12222233445566 78899999999999999999
Q ss_pred eCCCCceeeEecCcc
Q psy14456 77 DLRTRGCTNVLTPIT 91 (93)
Q Consensus 77 d~~~~~~~~~~~~~~ 91 (93)
..++..++.++..|.
T Consensus 279 swrtl~pLAVLkyHs 293 (323)
T KOG0322|consen 279 SWRTLNPLAVLKYHS 293 (323)
T ss_pred EeccCCchhhhhhhh
Confidence 999999888877664
No 227
>KOG1334|consensus
Probab=98.13 E-value=2.3e-06 Score=51.90 Aligned_cols=72 Identities=25% Similarity=0.310 Sum_probs=58.0
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
.|.++-|--. ..-++.+|+..|.|.+|+-.+++.+.-+.+....|+|+ -+|.-..|++++.|.-|++|-..+
T Consensus 395 TVKgVNFfGP----rsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP~~ 467 (559)
T KOG1334|consen 395 TVKGVNFFGP----RSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIWTPLT 467 (559)
T ss_pred ccceeeeccC----ccceEEecCccceEEEEecchhHHHHHhhcccceEeccCCCCCCchhhccCCccceeeecCCc
Confidence 3556655433 34566677789999999999999888888877788999 888888999999999999997643
No 228
>KOG1524|consensus
Probab=98.13 E-value=6.3e-06 Score=50.84 Aligned_cols=54 Identities=24% Similarity=0.399 Sum_probs=38.1
Q ss_pred CCccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecC
Q psy14456 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~ 60 (93)
.|.+-|.+++|++. ++.++++| +|...++||.. |..+.....|..+++++ |+|+
T Consensus 184 AHDGiiL~~~W~~~----s~lI~sgG-ED~kfKvWD~~-G~~Lf~S~~~ey~ITSva~npd 238 (737)
T KOG1524|consen 184 AHDGLVLSLSWSTQ----SNIIASGG-EDFRFKIWDAQ-GANLFTSAAEEYAITSVAFNPE 238 (737)
T ss_pred ccCcEEEEeecCcc----ccceeecC-CceeEEeeccc-CcccccCChhccceeeeeeccc
Confidence 37889999999998 78888888 79999999964 33333334444444544 4444
No 229
>KOG2315|consensus
Probab=98.11 E-value=6e-05 Score=46.52 Aligned_cols=80 Identities=18% Similarity=0.295 Sum_probs=58.3
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecC---CCcEEEEeC
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSH---DRTVRFWDL 78 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~---~~~i~~~d~ 78 (93)
.++|.++.|+|.+ ..+.+.-|-.--.+.++|++ +.++..+ -.++-+++ |+|.|+.++-++. .|.+-+||+
T Consensus 270 ~GPVhdv~W~~s~---~EF~VvyGfMPAkvtifnlr-~~~v~df--~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv 343 (566)
T KOG2315|consen 270 EGPVHDVTWSPSG---REFAVVYGFMPAKVTIFNLR-GKPVFDF--PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDV 343 (566)
T ss_pred CCCceEEEECCCC---CEEEEEEecccceEEEEcCC-CCEeEeC--CCCCccceEECCCCCEEEEeecCCCCCceEEEec
Confidence 5799999999984 45555556557889999976 4444444 34455677 9999998887664 489999999
Q ss_pred CCCceeeEec
Q psy14456 79 RTRGCTNVLT 88 (93)
Q Consensus 79 ~~~~~~~~~~ 88 (93)
.+.+++..+.
T Consensus 344 ~n~K~i~~~~ 353 (566)
T KOG2315|consen 344 PNRKLIAKFK 353 (566)
T ss_pred cchhhccccc
Confidence 9876665554
No 230
>KOG1064|consensus
Probab=98.09 E-value=3.1e-06 Score=58.18 Aligned_cols=73 Identities=22% Similarity=0.428 Sum_probs=59.0
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEEEecCCCEEEEecCCCcEEEEeCCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~ 81 (93)
|.+.++++++.|. .+.++++| ++|.|++||++..+.++.++. ++ ...++++++..|.+++|++..-
T Consensus 2335 H~~gaT~l~~~P~----~qllisgg-r~G~v~l~D~rqrql~h~~~~--------~~-~~~~f~~~ss~g~ikIw~~s~~ 2400 (2439)
T KOG1064|consen 2335 HDGGATVLAYAPK----HQLLISGG-RKGEVCLFDIRQRQLRHTFQA--------LD-TREYFVTGSSEGNIKIWRLSEF 2400 (2439)
T ss_pred cCCCceEEEEcCc----ceEEEecC-CcCcEEEeehHHHHHHHHhhh--------hh-hhheeeccCcccceEEEEcccc
Confidence 7788999999998 78888877 799999999987777666654 23 4568889999999999999876
Q ss_pred ceeeEec
Q psy14456 82 GCTNVLT 88 (93)
Q Consensus 82 ~~~~~~~ 88 (93)
..+..+.
T Consensus 2401 ~ll~~~p 2407 (2439)
T KOG1064|consen 2401 GLLHTFP 2407 (2439)
T ss_pred chhhcCc
Confidence 6555553
No 231
>KOG0280|consensus
Probab=98.09 E-value=8.6e-05 Score=42.87 Aligned_cols=69 Identities=13% Similarity=0.118 Sum_probs=52.3
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCcee--EEeeccccceEEE-Eec-CCCEEEEecCCCcEEEEeCC
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAF--QALSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~--~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d~~ 79 (93)
..++.|++. +..++++-+ +|.+.+-+....... +.++.|.-+.... |+. +++++.+|+.|+.+..||+|
T Consensus 124 ~lslD~~~~----~~~i~vs~s-~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R 196 (339)
T KOG0280|consen 124 ALSLDISTS----GTKIFVSDS-RGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIR 196 (339)
T ss_pred eeEEEeecc----CceEEEEcC-CCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEec
Confidence 356788887 566777664 888886554444443 3778898888777 766 67889999999999999999
No 232
>PRK01742 tolB translocation protein TolB; Provisional
Probab=98.06 E-value=0.00016 Score=44.06 Aligned_cols=74 Identities=15% Similarity=0.203 Sum_probs=48.4
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeC--CCeEEEEeCCCCce--eEEeeccccceEEE-EecCCCEEEEe-cCCCcEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAG--DCKIYVTDCATGQA--FQALSGHSGHVLSL-YNWGGATVLSG-SHDRTVRF 75 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~--~~~v~~~~~~~~~~--~~~~~~~~~~v~~~-~~~~~~~~~s~-~~~~~i~~ 75 (93)
|...+....|+|+ ++.++.+... +..|.+||+.++.. +..+.++. ... |+|++..++.+ ..++...+
T Consensus 202 ~~~~v~~p~wSPD----G~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~~---~~~~wSPDG~~La~~~~~~g~~~I 274 (429)
T PRK01742 202 SSQPLMSPAWSPD----GSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGHN---GAPAFSPDGSRLAFASSKDGVLNI 274 (429)
T ss_pred CCCccccceEcCC----CCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCcc---CceeECCCCCEEEEEEecCCcEEE
Confidence 3456889999999 6666654422 34799999988754 33333332 346 99999987765 46776555
Q ss_pred E--eCCCCc
Q psy14456 76 W--DLRTRG 82 (93)
Q Consensus 76 ~--d~~~~~ 82 (93)
| |+.++.
T Consensus 275 y~~d~~~~~ 283 (429)
T PRK01742 275 YVMGANGGT 283 (429)
T ss_pred EEEECCCCC
Confidence 5 665554
No 233
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.05 E-value=0.00014 Score=43.59 Aligned_cols=71 Identities=20% Similarity=0.215 Sum_probs=52.0
Q ss_pred cceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEecC
Q psy14456 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLTP 89 (93)
Q Consensus 19 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~ 89 (93)
+++++..-..++.|.+.|..+.+.+..+....+.-..+ |+++++++...+.|+.+.++|+.+++.+..+..
T Consensus 5 ~~l~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~ 76 (369)
T PF02239_consen 5 GNLFYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKV 76 (369)
T ss_dssp GGEEEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-
T ss_pred ccEEEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEec
Confidence 45554444458999999999999998887544433345 899999998888999999999999988877753
No 234
>KOG4640|consensus
Probab=98.04 E-value=7e-05 Score=46.97 Aligned_cols=76 Identities=16% Similarity=0.212 Sum_probs=61.1
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceE-EE-EecCCCEEEEecCCCcEEEEeCCCCc
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVL-SL-YNWGGATVLSGSHDRTVRFWDLRTRG 82 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~-~~-~~~~~~~~~s~~~~~~i~~~d~~~~~ 82 (93)
.+.-+.|+|. ..+++... .+|.+-+..++ .+.+..+.-+...+. ++ |.|+|.+++.|-.||+|.+.|.+++.
T Consensus 22 ~i~~~ewnP~----~dLiA~~t-~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~ 95 (665)
T KOG4640|consen 22 NIKRIEWNPK----MDLIATRT-EKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGG 95 (665)
T ss_pred ceEEEEEcCc----cchhheec-cCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCC
Confidence 4667889987 67776655 69999998888 555667765555555 88 99999999999999999999999987
Q ss_pred eeeE
Q psy14456 83 CTNV 86 (93)
Q Consensus 83 ~~~~ 86 (93)
.+..
T Consensus 96 ~l~~ 99 (665)
T KOG4640|consen 96 RLVS 99 (665)
T ss_pred ceec
Confidence 6655
No 235
>PRK05137 tolB translocation protein TolB; Provisional
Probab=98.04 E-value=0.00021 Score=43.52 Aligned_cols=78 Identities=22% Similarity=0.240 Sum_probs=52.9
Q ss_pred CccceeEEEEEecCCCCcceEEEeee--CCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEE-EecCCC--cEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGA--GDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVL-SGSHDR--TVRF 75 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~--~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~-s~~~~~--~i~~ 75 (93)
|.+.+....|+|+ ++.++.... .+..|.+|++.++... .+....+.+... |+|++..++ +.+.++ .|.+
T Consensus 200 ~~~~v~~p~wSpD----G~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~ 274 (435)
T PRK05137 200 GSSLVLTPRFSPN----RQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYT 274 (435)
T ss_pred CCCCeEeeEECCC----CCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECCCCCEEEEEEecCCCceEEE
Confidence 4467889999999 566554432 2568999999887653 344445555666 999998765 555554 4777
Q ss_pred EeCCCCcee
Q psy14456 76 WDLRTRGCT 84 (93)
Q Consensus 76 ~d~~~~~~~ 84 (93)
||+.++...
T Consensus 275 ~d~~~~~~~ 283 (435)
T PRK05137 275 MDLRSGTTT 283 (435)
T ss_pred EECCCCceE
Confidence 788876543
No 236
>KOG1645|consensus
Probab=98.04 E-value=3.4e-05 Score=46.14 Aligned_cols=76 Identities=17% Similarity=0.234 Sum_probs=59.0
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecC-CCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG-GATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~-~~~~~s~~~~~~i~~~d~~ 79 (93)
|...|.+++|+|. .+-++..++.+..|.+.|+++..++..+..+ ..+.+. |.-+ .+.+..|...|.|.++|++
T Consensus 192 ~g~~IrdlafSp~----~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R 266 (463)
T KOG1645|consen 192 EGSFIRDLAFSPF----NEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMR 266 (463)
T ss_pred cchhhhhhccCcc----ccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEcc
Confidence 5567889999998 4534555567999999999999888888777 555555 7774 4567788899999999999
Q ss_pred CCc
Q psy14456 80 TRG 82 (93)
Q Consensus 80 ~~~ 82 (93)
..+
T Consensus 267 ~~~ 269 (463)
T KOG1645|consen 267 QPE 269 (463)
T ss_pred CCC
Confidence 653
No 237
>KOG3881|consensus
Probab=98.04 E-value=7.7e-05 Score=44.35 Aligned_cols=78 Identities=13% Similarity=0.166 Sum_probs=60.9
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCc-eeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCce
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQ-AFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGC 83 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~-~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~ 83 (93)
++++.|-++.. ...|+++ .+-+.+++||.+.++ ++.++.--++++.++ ..|+++.++++...+.+..||++++..
T Consensus 205 ~tdi~Fl~g~~--~~~fat~-T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl 281 (412)
T KOG3881|consen 205 ITDIRFLEGSP--NYKFATI-TRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKL 281 (412)
T ss_pred eccceecCCCC--CceEEEE-ecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCcee
Confidence 56667766421 2345554 479999999998764 567777678889999 999999999999999999999999876
Q ss_pred eeE
Q psy14456 84 TNV 86 (93)
Q Consensus 84 ~~~ 86 (93)
+..
T Consensus 282 ~g~ 284 (412)
T KOG3881|consen 282 LGC 284 (412)
T ss_pred ecc
Confidence 554
No 238
>KOG4497|consensus
Probab=98.00 E-value=0.00011 Score=43.28 Aligned_cols=75 Identities=16% Similarity=0.236 Sum_probs=59.2
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCE-EEEecCCCcEEEEeCCCCc
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGAT-VLSGSHDRTVRFWDLRTRG 82 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~-~~s~~~~~~i~~~d~~~~~ 82 (93)
.|.-+.|..+ ...++++...++.|.+|++...+-...+....+++..+ |+|+++. +.+...+..|.+|.+.+..
T Consensus 50 ki~yieW~ad----s~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~ 125 (447)
T KOG4497|consen 50 KIVYIEWKAD----SCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQK 125 (447)
T ss_pred Hhhheeeecc----ceeeeeeeeccceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccce
Confidence 3455667766 66777777789999999998777777787777888888 9999955 4577799999999998765
Q ss_pred e
Q psy14456 83 C 83 (93)
Q Consensus 83 ~ 83 (93)
.
T Consensus 126 ~ 126 (447)
T KOG4497|consen 126 G 126 (447)
T ss_pred e
Confidence 4
No 239
>KOG2315|consensus
Probab=97.99 E-value=7.6e-05 Score=46.10 Aligned_cols=72 Identities=14% Similarity=0.280 Sum_probs=53.7
Q ss_pred ccceeEEEEEecCCCCcceEEEee--eCCCeEEEEeCCCCceeEEeeccccceEEEEecCCCEEEEecC------CCcEE
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGG--AGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSH------DRTVR 74 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g--~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~------~~~i~ 74 (93)
+++-+++-|+|. +++++.+| +-.|.+-+||+...+++..+..-...+ +-|+|+|.+++|+.. |..++
T Consensus 311 egpRN~~~fnp~----g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~tt~-~eW~PdGe~flTATTaPRlrvdNg~K 385 (566)
T KOG2315|consen 311 EGPRNTAFFNPH----GNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAANTTV-FEWSPDGEYFLTATTAPRLRVDNGIK 385 (566)
T ss_pred CCCccceEECCC----CCEEEEeecCCCCCceEEEeccchhhccccccCCceE-EEEcCCCcEEEEEeccccEEecCCeE
Confidence 466778889998 67776665 557889999998877777775433332 229999999998865 46788
Q ss_pred EEeCC
Q psy14456 75 FWDLR 79 (93)
Q Consensus 75 ~~d~~ 79 (93)
+|++.
T Consensus 386 iwhyt 390 (566)
T KOG2315|consen 386 IWHYT 390 (566)
T ss_pred EEEec
Confidence 89875
No 240
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=97.97 E-value=0.00034 Score=40.17 Aligned_cols=44 Identities=7% Similarity=0.200 Sum_probs=37.2
Q ss_pred ccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEecCccCC
Q psy14456 50 SGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLTPITVP 93 (93)
Q Consensus 50 ~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~~~ 93 (93)
...|..| .+|++.++++...+|.+.+|++.+-...+.+...+.|
T Consensus 229 ~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~~~eqP 273 (282)
T PF15492_consen 229 QDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWKQDEQP 273 (282)
T ss_pred CCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccchhhCC
Confidence 4578888 9999999999999999999999988777777665544
No 241
>KOG1517|consensus
Probab=97.97 E-value=7.8e-05 Score=49.49 Aligned_cols=61 Identities=23% Similarity=0.371 Sum_probs=48.4
Q ss_pred cceEEEeeeCCCeEEEEeCCCC---ceeEEeeccccc--eEEE-EecCCC-EEEEecCCCcEEEEeCCC
Q psy14456 19 SSLLISGGAGDCKIYVTDCATG---QAFQALSGHSGH--VLSL-YNWGGA-TVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 19 ~~~~~~~g~~~~~v~~~~~~~~---~~~~~~~~~~~~--v~~~-~~~~~~-~~~s~~~~~~i~~~d~~~ 80 (93)
++.++++. .||.+++||.+.. ..+.....|+.. |..+ +.+.|. .+++++.+|.|.+||+|.
T Consensus 1221 gn~i~AGf-aDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~ 1288 (1387)
T KOG1517|consen 1221 GNIIAAGF-ADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRM 1288 (1387)
T ss_pred CceEEEee-cCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEeccc
Confidence 56666665 5999999998753 346677778876 8888 877554 499999999999999997
No 242
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=97.97 E-value=0.00013 Score=42.78 Aligned_cols=70 Identities=9% Similarity=0.097 Sum_probs=49.5
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeE-------EeeccccceEEE-EecCCCEEEEecC-CCcEEEE
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQ-------ALSGHSGHVLSL-YNWGGATVLSGSH-DRTVRFW 76 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~-------~~~~~~~~v~~~-~~~~~~~~~s~~~-~~~i~~~ 76 (93)
...++++|+ ++.++++...++.|.+||+++...+. ... .......+ |+|+++++++... ++.+.+|
T Consensus 128 ~~~~~~~p~----g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~-~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~ 202 (330)
T PRK11028 128 CHSANIDPD----NRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTV-EGAGPRHMVFHPNQQYAYCVNELNSSVDVW 202 (330)
T ss_pred ccEeEeCCC----CCEEEEeeCCCCEEEEEEECCCCcccccCCCceecC-CCCCCceEEECCCCCEEEEEecCCCEEEEE
Confidence 456778888 67777666678999999997633221 111 12334567 9999998877764 8999999
Q ss_pred eCCC
Q psy14456 77 DLRT 80 (93)
Q Consensus 77 d~~~ 80 (93)
++..
T Consensus 203 ~~~~ 206 (330)
T PRK11028 203 QLKD 206 (330)
T ss_pred EEeC
Confidence 9973
No 243
>PRK01742 tolB translocation protein TolB; Provisional
Probab=97.95 E-value=9.7e-05 Score=44.93 Aligned_cols=73 Identities=16% Similarity=0.140 Sum_probs=48.3
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCc-eeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQ-AFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~-~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~ 81 (93)
..+....|+|+ ++.++.++.+++...+|+++... ....+ .+.. ... |+|++..++..+.++ +..||+.++
T Consensus 292 ~~~~~~~wSpD----G~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g 363 (429)
T PRK01742 292 GNNTEPSWSPD----GQSILFTSDRSGSPQVYRMSASGGGASLV-GGRG--YSAQISADGKTLVMINGDN-VVKQDLTSG 363 (429)
T ss_pred CCcCCEEECCC----CCEEEEEECCCCCceEEEEECCCCCeEEe-cCCC--CCccCCCCCCEEEEEcCCC-EEEEECCCC
Confidence 44678899999 66666555467888888865432 22222 3333 346 899999988776655 555999887
Q ss_pred cee
Q psy14456 82 GCT 84 (93)
Q Consensus 82 ~~~ 84 (93)
...
T Consensus 364 ~~~ 366 (429)
T PRK01742 364 STE 366 (429)
T ss_pred CeE
Confidence 654
No 244
>KOG1064|consensus
Probab=97.94 E-value=1e-05 Score=55.85 Aligned_cols=65 Identities=22% Similarity=0.353 Sum_probs=49.9
Q ss_pred eEEEee--eCCCeEEEEeCCCC---ceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEe
Q psy14456 21 LLISGG--AGDCKIYVTDCATG---QAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVL 87 (93)
Q Consensus 21 ~~~~~g--~~~~~v~~~~~~~~---~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~ 87 (93)
.++++| +.++.+.+||.... ..+. ..|.+.++++ +.|..+++++|+.+|.+.+||+++.+....+
T Consensus 2304 ~~~tag~s~d~~n~~lwDtl~~~~~s~v~--~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~ 2374 (2439)
T KOG1064|consen 2304 LLATAGRSSDNRNVCLWDTLLPPMNSLVH--TCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTF 2374 (2439)
T ss_pred hhhccccCCCCCcccchhcccCcccceee--eecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHh
Confidence 344444 45888999996432 2233 6799999999 9999999999999999999999987655444
No 245
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.94 E-value=2.7e-05 Score=30.07 Aligned_cols=30 Identities=37% Similarity=0.493 Sum_probs=24.5
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEe
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTD 36 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 36 (93)
|...|.++.|.+. ...+++++ .|+.+++|+
T Consensus 11 ~~~~i~~~~~~~~----~~~~~~~~-~d~~~~~~~ 40 (40)
T smart00320 11 HTGPVTSVAFSPD----GKYLASAS-DDGTIKLWD 40 (40)
T ss_pred cCCceeEEEECCC----CCEEEEec-CCCeEEEcC
Confidence 5678999999987 56777766 599999985
No 246
>KOG2041|consensus
Probab=97.90 E-value=8.1e-05 Score=47.83 Aligned_cols=74 Identities=19% Similarity=0.295 Sum_probs=59.5
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC---------------ceeEEeeccccceEEE-EecCCCEEEEe
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG---------------QAFQALSGHSGHVLSL-YNWGGATVLSG 67 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~---------------~~~~~~~~~~~~v~~~-~~~~~~~~~s~ 67 (93)
....|+.|..+ ..+++++| .||.+++..+.+. ..-+++.+|++.|..+ |+...+.+-|.
T Consensus 15 vkL~c~~WNke----~gyIAcgG-~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtS 89 (1189)
T KOG2041|consen 15 VKLHCAEWNKE----SGYIACGG-ADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTS 89 (1189)
T ss_pred ceEEEEEEccc----CCeEEecc-ccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEecccccccccc
Confidence 45778999877 67788887 5999999876532 1225678999999999 99999999999
Q ss_pred cCCCcEEEEeCCCCc
Q psy14456 68 SHDRTVRFWDLRTRG 82 (93)
Q Consensus 68 ~~~~~i~~~d~~~~~ 82 (93)
..+|.|++|-+-+|+
T Consensus 90 Dt~GlIiVWmlykgs 104 (1189)
T KOG2041|consen 90 DTSGLIIVWMLYKGS 104 (1189)
T ss_pred CCCceEEEEeeeccc
Confidence 999999999876553
No 247
>KOG1275|consensus
Probab=97.87 E-value=9.7e-05 Score=48.30 Aligned_cols=66 Identities=17% Similarity=0.287 Sum_probs=52.9
Q ss_pred ceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEEEecCCCEEEEecC---------CCcEEEEeCCCCceeeE
Q psy14456 20 SLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSH---------DRTVRFWDLRTRGCTNV 86 (93)
Q Consensus 20 ~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~---------~~~i~~~d~~~~~~~~~ 86 (93)
+.++.+|...|.|.+.|.++-+.++++..|.+.+..+ +-.|+++++|+. |..++|||+|.-..+..
T Consensus 187 nr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDf-Dv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~P 261 (1118)
T KOG1275|consen 187 NRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDF-DVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSP 261 (1118)
T ss_pred CcEEEeecccceEEeecCCcCceeeeeeccccceeee-eccCCeEEEeecccccccccccchhhhhhhhhhhccCC
Confidence 3455556689999999999999999999999998885 668999998864 45789999997544433
No 248
>KOG4190|consensus
Probab=97.86 E-value=1.7e-05 Score=49.46 Aligned_cols=75 Identities=15% Similarity=0.225 Sum_probs=52.7
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC-------ceeEEeeccccceEEE-EecCCCEEEEecCCCcE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG-------QAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTV 73 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~-------~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i 73 (93)
|+..|..++--.+ .+.++++. .|.+|++|.++.. -|..+++.|+.++..+ |-.+.+.++++ |+-+
T Consensus 734 H~~~iRai~AidN----ENSFiSAS-kDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~gi 806 (1034)
T KOG4190|consen 734 HQEKIRAIAAIDN----ENSFISAS-KDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DGGI 806 (1034)
T ss_pred cHHHhHHHHhccc----ccceeecc-CCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cCcc
Confidence 3444444443333 34456655 6999999998642 3566778999999999 88888787765 8899
Q ss_pred EEEeCCCCce
Q psy14456 74 RFWDLRTRGC 83 (93)
Q Consensus 74 ~~~d~~~~~~ 83 (93)
.+||.--+..
T Consensus 807 HlWDPFigr~ 816 (1034)
T KOG4190|consen 807 HLWDPFIGRL 816 (1034)
T ss_pred eeecccccch
Confidence 9999765543
No 249
>KOG1240|consensus
Probab=97.79 E-value=0.00062 Score=46.03 Aligned_cols=83 Identities=13% Similarity=0.120 Sum_probs=62.1
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEee-ccccceEEE-Eec---CCCEEEEec--CCCcEEE
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALS-GHSGHVLSL-YNW---GGATVLSGS--HDRTVRF 75 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~-~~~~~v~~~-~~~---~~~~~~s~~--~~~~i~~ 75 (93)
.+.|++++.+|. +++++.+. ..|.+-+||++-+.++..+. ++..++..+ .++ .....++++ ..+.+.+
T Consensus 1195 hG~vTSi~idp~----~~WlviGt-s~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~ 1269 (1431)
T KOG1240|consen 1195 HGLVTSIVIDPW----CNWLVIGT-SRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVST 1269 (1431)
T ss_pred ccceeEEEecCC----ceEEEEec-CCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceee
Confidence 478999999998 67877765 59999999999888877664 445666666 444 235555443 5688999
Q ss_pred EeCCCCceeeEecCc
Q psy14456 76 WDLRTRGCTNVLTPI 90 (93)
Q Consensus 76 ~d~~~~~~~~~~~~~ 90 (93)
|++.+|.+.+++...
T Consensus 1270 wn~~~g~~~~vl~~s 1284 (1431)
T KOG1240|consen 1270 WNMETGLRQTVLWAS 1284 (1431)
T ss_pred eecccCcceEEEEcC
Confidence 999999888887543
No 250
>KOG1517|consensus
Probab=97.78 E-value=0.00025 Score=47.31 Aligned_cols=78 Identities=24% Similarity=0.276 Sum_probs=54.0
Q ss_pred EEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEee-ccccceEEE-Eec-CCCEEEEecCCCcEEEEeCCCCc---
Q psy14456 9 VCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALS-GHSGHVLSL-YNW-GGATVLSGSHDRTVRFWDLRTRG--- 82 (93)
Q Consensus 9 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~-~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d~~~~~--- 82 (93)
++|... ...++++|. -..|++||.....++..+. +...-++.+ -+. .++.++.|..||.+++||.|...
T Consensus 1171 ~dWqQ~----~G~Ll~tGd-~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds 1245 (1387)
T KOG1517|consen 1171 VDWQQQ----SGHLLVTGD-VRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDS 1245 (1387)
T ss_pred eehhhh----CCeEEecCC-eeEEEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccc
Confidence 445444 445677773 8999999999888777664 334455666 332 57899999999999999988542
Q ss_pred eeeEecCcc
Q psy14456 83 CTNVLTPIT 91 (93)
Q Consensus 83 ~~~~~~~~~ 91 (93)
.+...+.|.
T Consensus 1246 ~v~~~R~h~ 1254 (1387)
T KOG1517|consen 1246 LVCVYREHN 1254 (1387)
T ss_pred cceeecccC
Confidence 344555443
No 251
>KOG1912|consensus
Probab=97.77 E-value=0.0004 Score=45.05 Aligned_cols=87 Identities=21% Similarity=0.224 Sum_probs=66.1
Q ss_pred CCccceeEEEEEecCCC-------CcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-Eec---CC-CEEEEec
Q psy14456 1 MHDGTVRDVCFIEDTSN-------KSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNW---GG-ATVLSGS 68 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~-------~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~---~~-~~~~s~~ 68 (93)
.|+..|+.+.|.|.... ..+++++++...|.|.+||...+..+..+..+...+..+ |-+ +. ..++.-.
T Consensus 53 ~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh 132 (1062)
T KOG1912|consen 53 LHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIH 132 (1062)
T ss_pred cCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEec
Confidence 47889999999986422 135677777789999999999998888888888888777 644 23 4556666
Q ss_pred CCCcEEEEeCCCCceeeEe
Q psy14456 69 HDRTVRFWDLRTRGCTNVL 87 (93)
Q Consensus 69 ~~~~i~~~d~~~~~~~~~~ 87 (93)
...++.+|+..+|+..-..
T Consensus 133 ~ss~lvLwntdtG~k~Wk~ 151 (1062)
T KOG1912|consen 133 GSSTLVLWNTDTGEKFWKY 151 (1062)
T ss_pred CCcEEEEEEccCCceeecc
Confidence 7789999998888765444
No 252
>KOG4547|consensus
Probab=97.76 E-value=0.00034 Score=43.43 Aligned_cols=70 Identities=26% Similarity=0.462 Sum_probs=54.0
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecC-----CCEEE-EecCCCcEEEE
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG-----GATVL-SGSHDRTVRFW 76 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~-----~~~~~-s~~~~~~i~~~ 76 (93)
..+..++++|+ +..++++ .+.|.+||+++++.+..|.+|.+++.++ |-.. |.+++ +...+..+.+|
T Consensus 145 ~~~~sl~is~D----~~~l~~a---s~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w 217 (541)
T KOG4547|consen 145 PLVSSLCISPD----GKILLTA---SRQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVW 217 (541)
T ss_pred CccceEEEcCC----CCEEEec---cceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEE
Confidence 35667788888 5555553 5899999999999999999999999999 8665 45555 44577788888
Q ss_pred eCCC
Q psy14456 77 DLRT 80 (93)
Q Consensus 77 d~~~ 80 (93)
-++.
T Consensus 218 ~v~~ 221 (541)
T KOG4547|consen 218 VVEK 221 (541)
T ss_pred EEEc
Confidence 6654
No 253
>KOG4532|consensus
Probab=97.71 E-value=0.00099 Score=38.40 Aligned_cols=72 Identities=14% Similarity=0.101 Sum_probs=53.9
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCce--eE-EeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCC
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQA--FQ-ALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~--~~-~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~ 81 (93)
+..+.++++ ++++++.| +...|..|.++.... +. .....+..-.+. |+.....++++..|+.+.+||+|..
T Consensus 161 ~ns~~~snd----~~~~~~Vg-ds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~ 235 (344)
T KOG4532|consen 161 QNSLHYSND----PSWGSSVG-DSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNM 235 (344)
T ss_pred eeeeEEcCC----CceEEEec-CCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEeccc
Confidence 678888888 88999988 588899888765432 23 222333344555 8888889999999999999999975
Q ss_pred c
Q psy14456 82 G 82 (93)
Q Consensus 82 ~ 82 (93)
.
T Consensus 236 ~ 236 (344)
T KOG4532|consen 236 A 236 (344)
T ss_pred c
Confidence 3
No 254
>PRK02889 tolB translocation protein TolB; Provisional
Probab=97.70 E-value=0.00069 Score=41.33 Aligned_cols=71 Identities=18% Similarity=0.212 Sum_probs=47.0
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeC--CCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEE-EecCCCcEEEEeC
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAG--DCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVL-SGSHDRTVRFWDL 78 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~-s~~~~~~i~~~d~ 78 (93)
.+.+...+|+|+ ++.++..... ...|.+||+.++.... +....+..... |+|++..++ +.+.++...+|.+
T Consensus 195 ~~~v~~p~wSPD----G~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~ 269 (427)
T PRK02889 195 PEPIISPAWSPD----GTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTV 269 (427)
T ss_pred CCCcccceEcCC----CCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEEccCCCceEEEE
Confidence 456788999999 6666544322 3468999998886543 33233444566 999998776 5667777666643
No 255
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=97.69 E-value=0.00064 Score=39.87 Aligned_cols=68 Identities=12% Similarity=0.255 Sum_probs=45.6
Q ss_pred EEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeecc---ccceEEE-EecCCCEEEEec-CCCcEEEEeCC
Q psy14456 8 DVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGH---SGHVLSL-YNWGGATVLSGS-HDRTVRFWDLR 79 (93)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~---~~~v~~~-~~~~~~~~~s~~-~~~~i~~~d~~ 79 (93)
.+.++|+ +++++++...++.|.+|+++.......+.++ ......+ ++++++.+++++ .++.+.+|++.
T Consensus 232 ~i~~~pd----g~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~ 304 (330)
T PRK11028 232 DIHITPD----GRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYEID 304 (330)
T ss_pred eEEECCC----CCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEccCCcEEEEEEc
Confidence 4778888 6777776544789999998654321122222 1233467 899998888665 58999999774
No 256
>PRK05137 tolB translocation protein TolB; Provisional
Probab=97.67 E-value=0.0016 Score=39.78 Aligned_cols=76 Identities=16% Similarity=0.164 Sum_probs=48.6
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCe--EEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEec-CC--CcEEEEe
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCK--IYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGS-HD--RTVRFWD 77 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~--v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~-~~--~~i~~~d 77 (93)
+.+...+|+|+ ++.++.+.+.++. |.++|+.++.. ..+..+....... |+|++..++..+ .+ ..+.++|
T Consensus 246 g~~~~~~~SPD----G~~la~~~~~~g~~~Iy~~d~~~~~~-~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d 320 (435)
T PRK05137 246 GMTFAPRFSPD----GRKVVMSLSQGGNTDIYTMDLRSGTT-TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMN 320 (435)
T ss_pred CcccCcEECCC----CCEEEEEEecCCCceEEEEECCCCce-EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEE
Confidence 45667889999 6665544434555 66678777654 3454455445566 999998877554 33 3677888
Q ss_pred CCCCcee
Q psy14456 78 LRTRGCT 84 (93)
Q Consensus 78 ~~~~~~~ 84 (93)
+..+...
T Consensus 321 ~~g~~~~ 327 (435)
T PRK05137 321 ADGSNPR 327 (435)
T ss_pred CCCCCeE
Confidence 7765443
No 257
>PRK03629 tolB translocation protein TolB; Provisional
Probab=97.66 E-value=0.0018 Score=39.61 Aligned_cols=74 Identities=18% Similarity=0.085 Sum_probs=46.5
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCC--eEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecC-CC--cEEEEeC
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDC--KIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSH-DR--TVRFWDL 78 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~--~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~-~~--~i~~~d~ 78 (93)
.+....|+|+ ++.++...+.++ .|.+||++++.... +......+... |+|++..++..+. ++ .+..+|+
T Consensus 244 ~~~~~~~SPD----G~~La~~~~~~g~~~I~~~d~~tg~~~~-lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~ 318 (429)
T PRK03629 244 HNGAPAFSPD----GSKLAFALSKTGSLNLYVMDLASGQIRQ-VTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNI 318 (429)
T ss_pred CcCCeEECCC----CCEEEEEEcCCCCcEEEEEECCCCCEEE-ccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEEC
Confidence 3456789999 666665433344 58888988776544 33334455667 9999998765543 34 4444566
Q ss_pred CCCce
Q psy14456 79 RTRGC 83 (93)
Q Consensus 79 ~~~~~ 83 (93)
.++..
T Consensus 319 ~~g~~ 323 (429)
T PRK03629 319 NGGAP 323 (429)
T ss_pred CCCCe
Confidence 65543
No 258
>PRK04922 tolB translocation protein TolB; Provisional
Probab=97.65 E-value=0.0011 Score=40.50 Aligned_cols=77 Identities=23% Similarity=0.217 Sum_probs=50.4
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeC--CCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEE-EecCCC--cEEEE
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAG--DCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVL-SGSHDR--TVRFW 76 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~-s~~~~~--~i~~~ 76 (93)
...+....|+|+ ++.++..... ...+.+|++.++.... +....+..... |+|++..++ +.+.++ .|.+|
T Consensus 203 ~~~v~~p~wSpD----g~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~ 277 (433)
T PRK04922 203 AEPILSPAWSPD----GKKLAYVSFERGRSAIYVQDLATGQREL-VASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVM 277 (433)
T ss_pred CCccccccCCCC----CCEEEEEecCCCCcEEEEEECCCCCEEE-eccCCCCccCceECCCCCEEEEEEeCCCCceEEEE
Confidence 346788899999 6666654422 3468999998776533 22333334456 999998765 444444 68999
Q ss_pred eCCCCcee
Q psy14456 77 DLRTRGCT 84 (93)
Q Consensus 77 d~~~~~~~ 84 (93)
|+.++...
T Consensus 278 d~~~g~~~ 285 (433)
T PRK04922 278 DLGSRQLT 285 (433)
T ss_pred ECCCCCeE
Confidence 99877643
No 259
>PRK00178 tolB translocation protein TolB; Provisional
Probab=97.65 E-value=0.0021 Score=39.14 Aligned_cols=77 Identities=17% Similarity=0.183 Sum_probs=49.4
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCC--CeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEE-EecCCC--cEEEE
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGD--CKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVL-SGSHDR--TVRFW 76 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~--~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~-s~~~~~--~i~~~ 76 (93)
...+....|+|+ ++.++....++ ..|.+|++.++.... +....+..... |+|++..++ +...++ .+.++
T Consensus 198 ~~~~~~p~wSpD----G~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~ 272 (430)
T PRK00178 198 REPILSPRWSPD----GKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVM 272 (430)
T ss_pred CCceeeeeECCC----CCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCCCEEEEEEccCCCceEEEE
Confidence 356788899999 66665544233 468888988776533 22223333456 999998776 444444 67888
Q ss_pred eCCCCcee
Q psy14456 77 DLRTRGCT 84 (93)
Q Consensus 77 d~~~~~~~ 84 (93)
|+.++...
T Consensus 273 d~~~~~~~ 280 (430)
T PRK00178 273 DLASRQLS 280 (430)
T ss_pred ECCCCCeE
Confidence 98876543
No 260
>KOG1409|consensus
Probab=97.65 E-value=0.0017 Score=38.53 Aligned_cols=40 Identities=33% Similarity=0.690 Sum_probs=35.4
Q ss_pred eeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCC
Q psy14456 42 AFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 42 ~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~ 81 (93)
.+..+.+|.+.+.+. |.+....+.+|..|..+.+||+.-.
T Consensus 189 ~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~ 229 (404)
T KOG1409|consen 189 LITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGR 229 (404)
T ss_pred eEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCC
Confidence 456778899999999 9998899999999999999998744
No 261
>PRK03629 tolB translocation protein TolB; Provisional
Probab=97.65 E-value=0.0024 Score=39.07 Aligned_cols=78 Identities=17% Similarity=0.177 Sum_probs=49.9
Q ss_pred cceeEEEEEecCCCCcceEEEee--eCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEe-cCCC--cEEEEe
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGG--AGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSG-SHDR--TVRFWD 77 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g--~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~-~~~~--~i~~~d 77 (93)
..+...+|+|+ ++.++... ..+..+.+|++.+++... +....+..... |+|++..++.. ..++ .|.+||
T Consensus 199 ~~~~~p~wSPD----G~~la~~s~~~g~~~i~i~dl~~G~~~~-l~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d 273 (429)
T PRK03629 199 QPLMSPAWSPD----GSKLAYVTFESGRSALVIQTLANGAVRQ-VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMD 273 (429)
T ss_pred CceeeeEEcCC----CCEEEEEEecCCCcEEEEEECCCCCeEE-ccCCCCCcCCeEECCCCCEEEEEEcCCCCcEEEEEE
Confidence 46788999999 66665432 124578899988776433 22222233356 99999877643 4444 588899
Q ss_pred CCCCceeeE
Q psy14456 78 LRTRGCTNV 86 (93)
Q Consensus 78 ~~~~~~~~~ 86 (93)
+.++...+.
T Consensus 274 ~~tg~~~~l 282 (429)
T PRK03629 274 LASGQIRQV 282 (429)
T ss_pred CCCCCEEEc
Confidence 987765443
No 262
>PRK02889 tolB translocation protein TolB; Provisional
Probab=97.59 E-value=0.0014 Score=39.98 Aligned_cols=75 Identities=15% Similarity=-0.011 Sum_probs=45.6
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeC--CCCceeEEeeccccceEEE-EecCCCEEEEecCCC---cEEEEeC
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDC--ATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDR---TVRFWDL 78 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~---~i~~~d~ 78 (93)
......|+|+ ++.++..+.+++...+|.+ ..+.... +.......... |+|+++.++..+.++ .+.+||+
T Consensus 285 ~~~~~~wSpD----G~~l~f~s~~~g~~~Iy~~~~~~g~~~~-lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~ 359 (427)
T PRK02889 285 IDTEPFFSPD----GRSIYFTSDRGGAPQIYRMPASGGAAQR-VTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDL 359 (427)
T ss_pred CCcCeEEcCC----CCEEEEEecCCCCcEEEEEECCCCceEE-EecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEEC
Confidence 3566789999 6666554445666667755 3443322 22112222345 899999887655443 6899999
Q ss_pred CCCcee
Q psy14456 79 RTRGCT 84 (93)
Q Consensus 79 ~~~~~~ 84 (93)
.++...
T Consensus 360 ~~g~~~ 365 (427)
T PRK02889 360 ATGQVT 365 (427)
T ss_pred CCCCeE
Confidence 877643
No 263
>KOG0882|consensus
Probab=97.55 E-value=0.00035 Score=42.64 Aligned_cols=84 Identities=13% Similarity=0.116 Sum_probs=65.5
Q ss_pred CCccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC------Cce---------eEEeeccccceEEE-EecCCCEE
Q psy14456 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT------GQA---------FQALSGHSGHVLSL-YNWGGATV 64 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~------~~~---------~~~~~~~~~~v~~~-~~~~~~~~ 64 (93)
+|.++|.++.+.+. ++.+++.. ..|.|.-|..+. ... +..+...++...++ |+|++..+
T Consensus 142 lH~sPV~~i~y~qa----~Ds~vSiD-~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qi 216 (558)
T KOG0882|consen 142 LHFSPVKKIRYNQA----GDSAVSID-ISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQI 216 (558)
T ss_pred cccCceEEEEeecc----ccceeecc-ccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcc
Confidence 68999999999998 67777765 589999998762 111 22233345566788 99999999
Q ss_pred EEecCCCcEEEEeCCCCceeeEecC
Q psy14456 65 LSGSHDRTVRFWDLRTRGCTNVLTP 89 (93)
Q Consensus 65 ~s~~~~~~i~~~d~~~~~~~~~~~~ 89 (93)
.+-+.|..|++++.+++...+.+..
T Consensus 217 stl~~DrkVR~F~~KtGklvqeiDE 241 (558)
T KOG0882|consen 217 STLNPDRKVRGFVFKTGKLVQEIDE 241 (558)
T ss_pred cccCcccEEEEEEeccchhhhhhhc
Confidence 9999999999999999988777754
No 264
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=97.53 E-value=0.0054 Score=36.79 Aligned_cols=74 Identities=15% Similarity=0.088 Sum_probs=55.7
Q ss_pred EEecCCCCcceEEEeee---------CCCeEEEEeCCCCceeEEeecccc-------ceEEE-EecCCCEEEEec-C-CC
Q psy14456 11 FIEDTSNKSSLLISGGA---------GDCKIYVTDCATGQAFQALSGHSG-------HVLSL-YNWGGATVLSGS-H-DR 71 (93)
Q Consensus 11 ~~~~~~~~~~~~~~~g~---------~~~~v~~~~~~~~~~~~~~~~~~~-------~v~~~-~~~~~~~~~s~~-~-~~ 71 (93)
++|+ ++.++.+.+ ++..|.+||..+.+.+..+..-.. ....+ ++++++.++... . +.
T Consensus 53 ~spD----g~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~ 128 (352)
T TIGR02658 53 VASD----GSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSP 128 (352)
T ss_pred ECCC----CCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCC
Confidence 6777 666666666 799999999999998877753111 11244 899999888766 3 68
Q ss_pred cEEEEeCCCCceeeEec
Q psy14456 72 TVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 72 ~i~~~d~~~~~~~~~~~ 88 (93)
.+.+.|+.+++.+..+.
T Consensus 129 ~V~VvD~~~~kvv~ei~ 145 (352)
T TIGR02658 129 AVGVVDLEGKAFVRMMD 145 (352)
T ss_pred EEEEEECCCCcEEEEEe
Confidence 99999999998877664
No 265
>PRK04922 tolB translocation protein TolB; Provisional
Probab=97.50 E-value=0.0039 Score=38.18 Aligned_cols=74 Identities=14% Similarity=0.092 Sum_probs=45.3
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCe--EEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCC---CcEEEEeCC
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCK--IYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHD---RTVRFWDLR 79 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~--v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~---~~i~~~d~~ 79 (93)
....+|+|+ ++.++.+..+++. +.++++.+++... +.......... |+|++..++..+.+ ..+.+||+.
T Consensus 294 ~~~~~~spD----G~~l~f~sd~~g~~~iy~~dl~~g~~~~-lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~ 368 (433)
T PRK04922 294 DTEPTWAPD----GKSIYFTSDRGGRPQIYRVAASGGSAER-LTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLS 368 (433)
T ss_pred ccceEECCC----CCEEEEEECCCCCceEEEEECCCCCeEE-eecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECC
Confidence 456789998 6666655445555 5555666655432 22122223346 89999988755432 368899998
Q ss_pred CCcee
Q psy14456 80 TRGCT 84 (93)
Q Consensus 80 ~~~~~ 84 (93)
++...
T Consensus 369 ~g~~~ 373 (433)
T PRK04922 369 TGSVR 373 (433)
T ss_pred CCCeE
Confidence 77643
No 266
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=97.49 E-value=0.0041 Score=37.59 Aligned_cols=75 Identities=23% Similarity=0.225 Sum_probs=49.2
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCC--CeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEE-EecCC--CcEEEEe
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGD--CKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVL-SGSHD--RTVRFWD 77 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~--~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~-s~~~~--~~i~~~d 77 (93)
..+...+|+|+ ++.++.....+ ..|.+|++.++.... +..+....... |+|++..++ +.+.+ ..+.+||
T Consensus 190 ~~~~~p~~Spd----g~~la~~~~~~~~~~i~v~d~~~g~~~~-~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d 264 (417)
T TIGR02800 190 EPILSPAWSPD----GQKLAYVSFESGKPEIYVQDLATGQREK-VASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMD 264 (417)
T ss_pred CceecccCCCC----CCEEEEEEcCCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEECCCCCccEEEEE
Confidence 35777889998 66666544222 578999998876533 23344445567 999988665 44444 4588888
Q ss_pred CCCCce
Q psy14456 78 LRTRGC 83 (93)
Q Consensus 78 ~~~~~~ 83 (93)
+.++..
T Consensus 265 ~~~~~~ 270 (417)
T TIGR02800 265 LDGKQL 270 (417)
T ss_pred CCCCCE
Confidence 887653
No 267
>PRK01029 tolB translocation protein TolB; Provisional
Probab=97.40 E-value=0.003 Score=38.71 Aligned_cols=76 Identities=17% Similarity=0.104 Sum_probs=47.1
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeC--CC-CceeEEeeccccceEEE-EecCCCEEEEecCC---CcEEEEeC
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDC--AT-GQAFQALSGHSGHVLSL-YNWGGATVLSGSHD---RTVRFWDL 78 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~-~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~---~~i~~~d~ 78 (93)
....+|+|+ ++.++....+++...+|.+ .. +.....+......+... |+|++..++....+ ..+.+||+
T Consensus 283 ~~~p~wSPD----G~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl 358 (428)
T PRK01029 283 QGNPSFSPD----GTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDL 358 (428)
T ss_pred cCCeEECCC----CCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEEC
Confidence 356789999 6665554445676566643 32 22334444344455566 99999988755432 46889999
Q ss_pred CCCceee
Q psy14456 79 RTRGCTN 85 (93)
Q Consensus 79 ~~~~~~~ 85 (93)
.+++..+
T Consensus 359 ~~g~~~~ 365 (428)
T PRK01029 359 ATGRDYQ 365 (428)
T ss_pred CCCCeEE
Confidence 8776543
No 268
>KOG2079|consensus
Probab=97.38 E-value=0.0018 Score=43.42 Aligned_cols=65 Identities=25% Similarity=0.424 Sum_probs=48.4
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE----EecCCCEEEEecCCCc
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL----YNWGGATVLSGSHDRT 72 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~----~~~~~~~~~s~~~~~~ 72 (93)
+++|++++|+.+ +..+++ |-.+|.|.+||...+..++.+..+..+...+ +..++..+.++...|.
T Consensus 130 ~~~Vtsvafn~d----g~~l~~-G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs 198 (1206)
T KOG2079|consen 130 QGPVTSVAFNQD----GSLLLA-GLGDGHVTVWDMHRAKILKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS 198 (1206)
T ss_pred CCcceeeEecCC----Cceecc-ccCCCcEEEEEccCCcceeeeeecCCccceEEEEEEeCCCcEEEEccCCCc
Confidence 478999999988 565555 5569999999999999888887665544433 4445667788877775
No 269
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=97.35 E-value=0.012 Score=36.77 Aligned_cols=77 Identities=10% Similarity=0.220 Sum_probs=60.7
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCC----CcEEEEeC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHD----RTVRFWDL 78 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~----~~i~~~d~ 78 (93)
+.|..+..+|+ +++++.+. ....+.+.|++++.....-+...+-|..+ |++++.+++-+--+ ..|+++|+
T Consensus 402 g~I~av~vs~d----GK~~vvaN-dr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm 476 (668)
T COG4946 402 GNIEAVKVSPD----GKKVVVAN-DRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDM 476 (668)
T ss_pred cceEEEEEcCC----CcEEEEEc-CceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEec
Confidence 56888999998 77777765 58889999999998766556667788899 99999999876555 46889999
Q ss_pred CCCceee
Q psy14456 79 RTRGCTN 85 (93)
Q Consensus 79 ~~~~~~~ 85 (93)
..++...
T Consensus 477 ~~~Kiy~ 483 (668)
T COG4946 477 DGGKIYD 483 (668)
T ss_pred CCCeEEE
Confidence 8766443
No 270
>KOG0309|consensus
Probab=97.33 E-value=0.00084 Score=43.52 Aligned_cols=84 Identities=21% Similarity=0.335 Sum_probs=58.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCc-eeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQ-AFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~-~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
|+..|+.+-|.|.. ...++++. -|..+..||+++.. .+..+..-.+....+ |+.....+...+....+.+||.+
T Consensus 113 hsraitd~n~~~q~---pdVlatcs-vdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r 188 (1081)
T KOG0309|consen 113 HSRAITDINFNPQH---PDVLATCS-VDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLR 188 (1081)
T ss_pred CccceeccccCCCC---Ccceeecc-ccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCceEEEecc
Confidence 67889999999873 44555554 69999999998754 455554444444566 87755555566788899999999
Q ss_pred CCc-eeeEecC
Q psy14456 80 TRG-CTNVLTP 89 (93)
Q Consensus 80 ~~~-~~~~~~~ 89 (93)
.|. ++..+.+
T Consensus 189 ~gs~pl~s~K~ 199 (1081)
T KOG0309|consen 189 KGSTPLCSLKG 199 (1081)
T ss_pred CCCcceEEecc
Confidence 875 4544444
No 271
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.30 E-value=0.0079 Score=40.91 Aligned_cols=72 Identities=17% Similarity=0.203 Sum_probs=51.8
Q ss_pred eEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEee-------------ccccceEEE-EecCCCEEEEecCCCc
Q psy14456 7 RDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALS-------------GHSGHVLSL-YNWGGATVLSGSHDRT 72 (93)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~-------------~~~~~v~~~-~~~~~~~~~s~~~~~~ 72 (93)
..++++++ +..+++-. .++.|++||..++....... +.-.....+ ++++++++++-..++.
T Consensus 807 ~Gvavd~d----G~LYVADs-~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~ 881 (1057)
T PLN02919 807 LGVLCAKD----GQIYVADS-YNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSL 881 (1057)
T ss_pred ceeeEeCC----CcEEEEEC-CCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCE
Confidence 46777777 56666554 59999999988765442211 111245677 8899998888889999
Q ss_pred EEEEeCCCCce
Q psy14456 73 VRFWDLRTRGC 83 (93)
Q Consensus 73 i~~~d~~~~~~ 83 (93)
|++||+.++..
T Consensus 882 Irvid~~~~~~ 892 (1057)
T PLN02919 882 IRYLDLNKGEA 892 (1057)
T ss_pred EEEEECCCCcc
Confidence 99999998764
No 272
>PRK01029 tolB translocation protein TolB; Provisional
Probab=97.29 E-value=0.012 Score=36.10 Aligned_cols=78 Identities=17% Similarity=0.190 Sum_probs=50.1
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCC--CeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEE-EecC--CCcEEEEeC
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGD--CKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVL-SGSH--DRTVRFWDL 78 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~--~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~-s~~~--~~~i~~~d~ 78 (93)
.+....|+|+ ++.++.....+ ..|.+||+.++.... +......+... |+|++..++ +... ...+.++|+
T Consensus 328 ~~~~p~wSPD----G~~Laf~~~~~g~~~I~v~dl~~g~~~~-Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl 402 (428)
T PRK01029 328 NSSCPAWSPD----GKKIAFCSVIKGVRQICVYDLATGRDYQ-LTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISL 402 (428)
T ss_pred CccceeECCC----CCEEEEEEcCCCCcEEEEEECCCCCeEE-ccCCCCCccceEECCCCCEEEEEECCCCCceEEEEEC
Confidence 4567889999 67666554333 468899998886543 32222344566 999988776 3332 356788898
Q ss_pred CCCceeeEe
Q psy14456 79 RTRGCTNVL 87 (93)
Q Consensus 79 ~~~~~~~~~ 87 (93)
..+...+..
T Consensus 403 ~~g~~~~Lt 411 (428)
T PRK01029 403 ITKKTRKIV 411 (428)
T ss_pred CCCCEEEee
Confidence 877654443
No 273
>KOG4532|consensus
Probab=97.29 E-value=0.011 Score=34.29 Aligned_cols=68 Identities=16% Similarity=0.091 Sum_probs=44.9
Q ss_pred ceEEEeeeCCCeEEEEeCCCCcee-----EEeeccccceEEE-EecCCC--EEEEecCCCcEEEEeCCCCceeeEe
Q psy14456 20 SLLISGGAGDCKIYVTDCATGQAF-----QALSGHSGHVLSL-YNWGGA--TVLSGSHDRTVRFWDLRTRGCTNVL 87 (93)
Q Consensus 20 ~~~~~~g~~~~~v~~~~~~~~~~~-----~~~~~~~~~v~~~-~~~~~~--~~~s~~~~~~i~~~d~~~~~~~~~~ 87 (93)
+..++.+.+||++.+||++..... .+-..|++.+... |++.+. +|+-.-.=+.+.+.|+|++...+.+
T Consensus 215 ~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I 290 (344)
T KOG4532|consen 215 DLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVI 290 (344)
T ss_pred cceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEE
Confidence 344455569999999999865322 1123578888888 998553 3444445578899999987644433
No 274
>KOG1912|consensus
Probab=97.28 E-value=0.0014 Score=42.72 Aligned_cols=81 Identities=17% Similarity=0.142 Sum_probs=60.6
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCC------------CEEEEecC
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGG------------ATVLSGSH 69 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~------------~~~~s~~~ 69 (93)
...-.+++|+|.| +++=|+ ...|.+-|..+-+.+..+.-|...|+.+ |.|.. ..++++..
T Consensus 15 ~sN~~A~Dw~~~G------LiAygs-hslV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~ 87 (1062)
T KOG1912|consen 15 RSNRNAADWSPSG------LIAYGS-HSLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADI 87 (1062)
T ss_pred cccccccccCccc------eEEEec-CceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccc
Confidence 3445677888863 344454 7889999999999899898899999988 87732 24567778
Q ss_pred CCcEEEEeCCCCceeeEecCc
Q psy14456 70 DRTVRFWDLRTRGCTNVLTPI 90 (93)
Q Consensus 70 ~~~i~~~d~~~~~~~~~~~~~ 90 (93)
.|.|.+||...+..+..+..+
T Consensus 88 ~GrIil~d~~~~s~~~~l~~~ 108 (1062)
T KOG1912|consen 88 SGRIILVDFVLASVINWLSHS 108 (1062)
T ss_pred cCcEEEEEehhhhhhhhhcCC
Confidence 899999999987766655544
No 275
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=97.28 E-value=0.012 Score=36.19 Aligned_cols=80 Identities=13% Similarity=0.227 Sum_probs=57.4
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEE-E-E-ecCCC-----------------EE
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLS-L-Y-NWGGA-----------------TV 64 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~-~-~-~~~~~-----------------~~ 64 (93)
.+.++..+|. +.+.+++. .-|.|.++|+..+..+..+++..+.-.. + . ..... ++
T Consensus 309 ~~~~i~~sP~----~~laA~tD-slGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~Lv 383 (415)
T PF14655_consen 309 EGESICLSPS----GRLAAVTD-SLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLV 383 (415)
T ss_pred eEEEEEECCC----CCEEEEEc-CCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEE
Confidence 4778888887 67766665 4999999999999888888887654332 2 1 11111 23
Q ss_pred EEecCCCcEEEEeCCCCceeeEecC
Q psy14456 65 LSGSHDRTVRFWDLRTRGCTNVLTP 89 (93)
Q Consensus 65 ~s~~~~~~i~~~d~~~~~~~~~~~~ 89 (93)
+-....+.+.+|+++.|..+..+..
T Consensus 384 IyaprRg~lEvW~~~~g~Rv~a~~v 408 (415)
T PF14655_consen 384 IYAPRRGILEVWSMRQGPRVAAFNV 408 (415)
T ss_pred EEeccCCeEEEEecCCCCEEEEEEe
Confidence 3456789999999999998877753
No 276
>PRK04792 tolB translocation protein TolB; Provisional
Probab=97.27 E-value=0.0087 Score=36.95 Aligned_cols=75 Identities=16% Similarity=0.134 Sum_probs=46.5
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCC--eEEEEeCCCCceeEEeeccccceEEE-EecCCCEEE-EecCCCc--EEEEe
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDC--KIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVL-SGSHDRT--VRFWD 77 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~--~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~-s~~~~~~--i~~~d 77 (93)
..+....|+|+ ++.++....+++ .|.++|+.+++... +.......... |+|++..++ +.+.++. |.++|
T Consensus 218 ~~~~~p~wSPD----G~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d 292 (448)
T PRK04792 218 EPLMSPAWSPD----GRKLAYVSFENRKAEIFVQDIYTQVREK-VTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVD 292 (448)
T ss_pred CcccCceECCC----CCEEEEEEecCCCcEEEEEECCCCCeEE-ecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEE
Confidence 35668899999 666655433333 57788888776432 22222222356 999998776 4455554 77778
Q ss_pred CCCCce
Q psy14456 78 LRTRGC 83 (93)
Q Consensus 78 ~~~~~~ 83 (93)
+.+++.
T Consensus 293 l~tg~~ 298 (448)
T PRK04792 293 IATKAL 298 (448)
T ss_pred CCCCCe
Confidence 877654
No 277
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=97.23 E-value=0.016 Score=34.89 Aligned_cols=57 Identities=18% Similarity=0.220 Sum_probs=46.5
Q ss_pred CeEEEEeCCCCceeEEeeccccceEEE-EecCCC-EEEEec-CCCcEEEEeCCCCceeeEe
Q psy14456 30 CKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGA-TVLSGS-HDRTVRFWDLRTRGCTNVL 87 (93)
Q Consensus 30 ~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~-~~~s~~-~~~~i~~~d~~~~~~~~~~ 87 (93)
+.|.++|..+++.+..+.- ...+..+ +++++. ++++.+ .++.+.+.|..+++.++.+
T Consensus 279 ~~V~ViD~~t~kvi~~i~v-G~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i 338 (352)
T TIGR02658 279 RFLFVVDAKTGKRLRKIEL-GHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSV 338 (352)
T ss_pred CEEEEEECCCCeEEEEEeC-CCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeee
Confidence 6899999999998887753 3356677 999988 777555 6788999999999988887
No 278
>KOG2321|consensus
Probab=97.22 E-value=0.002 Score=40.60 Aligned_cols=65 Identities=23% Similarity=0.414 Sum_probs=51.1
Q ss_pred EEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEe
Q psy14456 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVL 87 (93)
Q Consensus 22 ~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~ 87 (93)
++.+|+ ...|.=++++.|+-+..+....+.++++ .++...++++|..++.+-.||.+..+....+
T Consensus 148 ly~~gs-g~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l 213 (703)
T KOG2321|consen 148 LYLVGS-GSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTL 213 (703)
T ss_pred EEEeec-CcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhhhheee
Confidence 444454 5566666888888888887777888888 8998889999999999999999987654444
No 279
>KOG3617|consensus
Probab=97.21 E-value=0.00052 Score=45.17 Aligned_cols=70 Identities=13% Similarity=0.328 Sum_probs=56.5
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
.+++++|+|. ..+++.|=.-|.+.+|...+.+--.....|..++..+ |+++|..+.++..-+.+.+|.+.
T Consensus 61 hatSLCWHpe-----~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 61 HATSLCWHPE-----EFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred ehhhhccChH-----HHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 4667899986 5566666668889999887766554556799999999 99999999999999999999655
No 280
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=97.17 E-value=0.018 Score=34.35 Aligned_cols=76 Identities=20% Similarity=0.260 Sum_probs=50.3
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCC--CCce--eEEeeccccceEEE-EecCCCEEEEec-CCCcEEEEeC
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCA--TGQA--FQALSGHSGHVLSL-YNWGGATVLSGS-HDRTVRFWDL 78 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~--~~~~--~~~~~~~~~~v~~~-~~~~~~~~~s~~-~~~~i~~~d~ 78 (93)
....+.++|+ +++++++......|.+|+++ ++.. +..+.........+ +++++++++.+. .++.|.+|++
T Consensus 246 ~~~~i~ispd----g~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~ 321 (345)
T PF10282_consen 246 APAEIAISPD----GRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDI 321 (345)
T ss_dssp SEEEEEE-TT----SSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEE
T ss_pred CceeEEEecC----CCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEE
Confidence 4667889999 77777776568899999984 3332 23333223345778 999999888665 6678998865
Q ss_pred --CCCcee
Q psy14456 79 --RTRGCT 84 (93)
Q Consensus 79 --~~~~~~ 84 (93)
.+|...
T Consensus 322 d~~tG~l~ 329 (345)
T PF10282_consen 322 DPDTGKLT 329 (345)
T ss_dssp ETTTTEEE
T ss_pred eCCCCcEE
Confidence 455543
No 281
>PRK00178 tolB translocation protein TolB; Provisional
Probab=97.16 E-value=0.015 Score=35.57 Aligned_cols=74 Identities=19% Similarity=0.118 Sum_probs=46.4
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCC--eEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEec-CC--CcEEEEeCC
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDC--KIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGS-HD--RTVRFWDLR 79 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~--~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~-~~--~~i~~~d~~ 79 (93)
+....|+|+ ++.++.+.+.++ .|.++|+.++... .+..+....... |+|++..++..+ .+ ..+.++|+.
T Consensus 245 ~~~~~~SpD----G~~la~~~~~~g~~~Iy~~d~~~~~~~-~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~ 319 (430)
T PRK00178 245 NGAPAWSPD----GSKLAFVLSKDGNPEIYVMDLASRQLS-RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVN 319 (430)
T ss_pred cCCeEECCC----CCEEEEEEccCCCceEEEEECCCCCeE-EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECC
Confidence 446889998 666654333454 5777888877643 344444444556 899988765443 33 357777877
Q ss_pred CCcee
Q psy14456 80 TRGCT 84 (93)
Q Consensus 80 ~~~~~ 84 (93)
++...
T Consensus 320 ~g~~~ 324 (430)
T PRK00178 320 GGRAE 324 (430)
T ss_pred CCCEE
Confidence 76543
No 282
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.15 E-value=0.0031 Score=26.72 Aligned_cols=30 Identities=17% Similarity=0.202 Sum_probs=24.7
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCA 38 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 38 (93)
+.|.+++|+|. .++++.+. .+|.|.++.++
T Consensus 12 ~~v~~~~w~P~----mdLiA~~t-~~g~v~v~Rl~ 41 (47)
T PF12894_consen 12 SRVSCMSWCPT----MDLIALGT-EDGEVLVYRLN 41 (47)
T ss_pred CcEEEEEECCC----CCEEEEEE-CCCeEEEEECC
Confidence 57999999998 77766654 69999999884
No 283
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=97.11 E-value=0.019 Score=34.79 Aligned_cols=73 Identities=16% Similarity=0.173 Sum_probs=46.4
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCC--eEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCC---cEEEEeCC
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDC--KIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDR---TVRFWDLR 79 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~--~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~---~i~~~d~~ 79 (93)
.....|+|+ ++.++....+.+ .|.++++..+... .+..+....... |++++..++....+. .+.++|+.
T Consensus 280 ~~~~~~s~d----g~~l~~~s~~~g~~~iy~~d~~~~~~~-~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~ 354 (417)
T TIGR02800 280 DTEPSWSPD----GKSIAFTSDRGGSPQIYMMDADGGEVR-RLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLD 354 (417)
T ss_pred CCCEEECCC----CCEEEEEECCCCCceEEEEECCCCCEE-EeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCC
Confidence 345688888 666655443444 4666777666543 333334444566 899998888766554 78888887
Q ss_pred CCce
Q psy14456 80 TRGC 83 (93)
Q Consensus 80 ~~~~ 83 (93)
++..
T Consensus 355 ~~~~ 358 (417)
T TIGR02800 355 GGGE 358 (417)
T ss_pred CCCe
Confidence 7543
No 284
>PRK04792 tolB translocation protein TolB; Provisional
Probab=97.11 E-value=0.019 Score=35.56 Aligned_cols=74 Identities=19% Similarity=0.148 Sum_probs=46.0
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCe--EEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEec-CC--CcEEEEeCC
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCK--IYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGS-HD--RTVRFWDLR 79 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~--v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~-~~--~~i~~~d~~ 79 (93)
.....|+|+ ++.++.+.+.++. |.++|+.++.. ..+..+....... |+|++..++..+ .+ ..+.++|+.
T Consensus 264 ~~~~~wSPD----G~~La~~~~~~g~~~Iy~~dl~tg~~-~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~ 338 (448)
T PRK04792 264 NGAPRFSPD----GKKLALVLSKDGQPEIYVVDIATKAL-TRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLA 338 (448)
T ss_pred cCCeeECCC----CCEEEEEEeCCCCeEEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECC
Confidence 346789999 6666654445665 66677776654 3344444444566 999988776443 33 356666777
Q ss_pred CCcee
Q psy14456 80 TRGCT 84 (93)
Q Consensus 80 ~~~~~ 84 (93)
+++..
T Consensus 339 ~g~~~ 343 (448)
T PRK04792 339 SGKVS 343 (448)
T ss_pred CCCEE
Confidence 66543
No 285
>KOG4190|consensus
Probab=97.07 E-value=0.0024 Score=40.39 Aligned_cols=40 Identities=13% Similarity=0.159 Sum_probs=32.6
Q ss_pred ccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEecC
Q psy14456 50 SGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLTP 89 (93)
Q Consensus 50 ~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~ 89 (93)
++.+.++ ..+.|++++.+-.+|.+.+.|.++|+.+..+++
T Consensus 876 na~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrp 916 (1034)
T KOG4190|consen 876 NALTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSWRP 916 (1034)
T ss_pred chheeEEEeccCcchhhHHhcCCcEEEEecCCCceeccCCc
Confidence 4556777 888899999888999999999999987776554
No 286
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.05 E-value=0.044 Score=37.57 Aligned_cols=75 Identities=19% Similarity=0.175 Sum_probs=50.7
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEee------------c---------cccceEEE-EecCCCE
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALS------------G---------HSGHVLSL-YNWGGAT 63 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~------------~---------~~~~v~~~-~~~~~~~ 63 (93)
...++++|+ +..++.+...++.|++||++++....... + .-.....+ +++++.+
T Consensus 742 P~GIavspd----G~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~L 817 (1057)
T PLN02919 742 PSGISLSPD----LKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQI 817 (1057)
T ss_pred ccEEEEeCC----CCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcE
Confidence 346888888 56455445568999999988764321000 0 01123467 8888888
Q ss_pred EEEecCCCcEEEEeCCCCcee
Q psy14456 64 VLSGSHDRTVRFWDLRTRGCT 84 (93)
Q Consensus 64 ~~s~~~~~~i~~~d~~~~~~~ 84 (93)
+++-..++.|.+||..++...
T Consensus 818 YVADs~N~rIrviD~~tg~v~ 838 (1057)
T PLN02919 818 YVADSYNHKIKKLDPATKRVT 838 (1057)
T ss_pred EEEECCCCEEEEEECCCCeEE
Confidence 888889999999999876554
No 287
>KOG1832|consensus
Probab=97.04 E-value=0.0021 Score=42.77 Aligned_cols=82 Identities=17% Similarity=0.278 Sum_probs=60.4
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEec-CCC-cEEEEeC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGS-HDR-TVRFWDL 78 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~-~~~-~i~~~d~ 78 (93)
|++..+|++|+-+ .+.++. |+..|.|+++++.+|.......+|.+.++.+ -+-++..+++.+ ..+ ..-+|+.
T Consensus 1100 ~~~~fTc~afs~~----~~hL~v-G~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~ 1174 (1516)
T KOG1832|consen 1100 ETALFTCIAFSGG----TNHLAV-GSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDA 1174 (1516)
T ss_pred cccceeeEEeecC----CceEEe-eeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhcc
Confidence 4677899999976 444444 5579999999999999988888999999988 666777766554 333 5678887
Q ss_pred CC-CceeeEec
Q psy14456 79 RT-RGCTNVLT 88 (93)
Q Consensus 79 ~~-~~~~~~~~ 88 (93)
.+ +.....|.
T Consensus 1175 ~s~~~~~Hsf~ 1185 (1516)
T KOG1832|consen 1175 SSTGGPRHSFD 1185 (1516)
T ss_pred ccccCcccccc
Confidence 64 33444443
No 288
>KOG2079|consensus
Probab=97.01 E-value=0.0034 Score=42.20 Aligned_cols=72 Identities=22% Similarity=0.405 Sum_probs=51.9
Q ss_pred eEEEeeeCCCeEEEEeCCCCce-eEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEecCccCC
Q psy14456 21 LLISGGAGDCKIYVTDCATGQA-FQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLTPITVP 93 (93)
Q Consensus 21 ~~~~~g~~~~~v~~~~~~~~~~-~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~~~ 93 (93)
+++.+ +..|.+...|....-. ...=..-.+++.++ |+.++..++.|-.+|.|.+||...+..++.+..+..|
T Consensus 101 ~ivi~-Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap 174 (1206)
T KOG2079|consen 101 PIVIG-TSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAP 174 (1206)
T ss_pred eEEEE-cCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCc
Confidence 34443 3478887777654311 11112345688999 9999999999999999999999999998888766554
No 289
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=96.90 E-value=0.0072 Score=25.58 Aligned_cols=32 Identities=16% Similarity=0.165 Sum_probs=27.1
Q ss_pred ccceEEE-EecCCCEEEEecCCCcEEEEeCCCCc
Q psy14456 50 SGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRG 82 (93)
Q Consensus 50 ~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~ 82 (93)
.+.+..+ |+|...+++.+..++.+.++.+ +++
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~q 43 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQ 43 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCc
Confidence 3467788 9999999999999999999988 443
No 290
>KOG4497|consensus
Probab=96.88 E-value=0.011 Score=35.30 Aligned_cols=60 Identities=13% Similarity=0.109 Sum_probs=41.5
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEec
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGS 68 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~ 68 (93)
+.+...+|+|+ ++.++....-+-.|.+|.+.+...... +.-+..+..+ |++++++.+-++
T Consensus 92 agls~~~WSPd----grhiL~tseF~lriTVWSL~t~~~~~~-~~pK~~~kg~~f~~dg~f~ai~s 152 (447)
T KOG4497|consen 92 AGLSSISWSPD----GRHILLTSEFDLRITVWSLNTQKGYLL-PHPKTNVKGYAFHPDGQFCAILS 152 (447)
T ss_pred CcceeeeECCC----cceEeeeecceeEEEEEEeccceeEEe-cccccCceeEEECCCCceeeeee
Confidence 56888999999 544444444689999999988776442 2233344666 899998766543
No 291
>KOG1334|consensus
Probab=96.85 E-value=0.0022 Score=39.60 Aligned_cols=73 Identities=30% Similarity=0.479 Sum_probs=55.2
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEe-eccccceEEE-Eec--CCCEEEEecCCCcEEEEe
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQAL-SGHSGHVLSL-YNW--GGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~-~~~~~~v~~~-~~~--~~~~~~s~~~~~~i~~~d 77 (93)
|.+-|..+.|... +..+++++ .|..+.+||-..+.....+ .+|...+.-- |-| +.+.+++++.|+++++-.
T Consensus 141 H~GcVntV~FN~~----Gd~l~SgS-DD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~ 215 (559)
T KOG1334|consen 141 HKGCVNTVHFNQR----GDVLASGS-DDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSE 215 (559)
T ss_pred CCCccceeeeccc----CceeeccC-ccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeee
Confidence 7788888888776 66666655 6999999998777766555 4777766555 655 457889999999998876
Q ss_pred CC
Q psy14456 78 LR 79 (93)
Q Consensus 78 ~~ 79 (93)
+.
T Consensus 216 i~ 217 (559)
T KOG1334|consen 216 IL 217 (559)
T ss_pred ec
Confidence 54
No 292
>KOG4714|consensus
Probab=96.81 E-value=0.011 Score=34.20 Aligned_cols=35 Identities=20% Similarity=0.322 Sum_probs=29.2
Q ss_pred CCccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC
Q psy14456 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT 39 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 39 (93)
.|++++..+-|+|.. .+.++++. +||.+..||..+
T Consensus 221 ahk~~i~eV~FHpk~---p~~Lft~s-edGslw~wdas~ 255 (319)
T KOG4714|consen 221 AHKAEIWEVHFHPKN---PEHLFTCS-EDGSLWHWDAST 255 (319)
T ss_pred HhhhhhhheeccCCC---chheeEec-CCCcEEEEcCCC
Confidence 378899999999985 67788876 699999999763
No 293
>KOG1354|consensus
Probab=96.80 E-value=0.0023 Score=38.13 Aligned_cols=81 Identities=15% Similarity=0.248 Sum_probs=52.1
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCce------e----------EEeeccccceEEE-EecCCCEEEEe
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQA------F----------QALSGHSGHVLSL-YNWGGATVLSG 67 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~------~----------~~~~~~~~~v~~~-~~~~~~~~~s~ 67 (93)
-|++-.|+|.. ...++-+.+ .|.|++-|++.... + --+..-...|..+ |++.|+++++.
T Consensus 215 VITsaEFhp~~---cn~f~YSSS-KGtIrLcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsR 290 (433)
T KOG1354|consen 215 VITSAEFHPHH---CNVFVYSSS-KGTIRLCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSR 290 (433)
T ss_pred HHhhhccCHhH---ccEEEEecC-CCcEEEeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEe
Confidence 46667788874 345555554 99999999873210 1 1111223567788 99999999877
Q ss_pred cCCCcEEEEeCC-CCceeeEecCc
Q psy14456 68 SHDRTVRFWDLR-TRGCTNVLTPI 90 (93)
Q Consensus 68 ~~~~~i~~~d~~-~~~~~~~~~~~ 90 (93)
.. -++++||+. ...+...+..|
T Consensus 291 Dy-ltvk~wD~nme~~pv~t~~vh 313 (433)
T KOG1354|consen 291 DY-LTVKLWDLNMEAKPVETYPVH 313 (433)
T ss_pred cc-ceeEEEeccccCCcceEEeeh
Confidence 42 589999994 44555555444
No 294
>KOG2314|consensus
Probab=96.80 E-value=0.0092 Score=37.74 Aligned_cols=75 Identities=15% Similarity=0.147 Sum_probs=52.5
Q ss_pred eEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecC-----------CCcEE
Q psy14456 7 RDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSH-----------DRTVR 74 (93)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~-----------~~~i~ 74 (93)
+-+.|||. +.++++- ...-|.+|--..-..++.+. |.+ +..+ |+|...+|+|=+. ...++
T Consensus 214 tyv~wSP~----GTYL~t~--Hk~GI~lWGG~~f~r~~RF~-Hp~-Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~ 285 (698)
T KOG2314|consen 214 TYVRWSPK----GTYLVTF--HKQGIALWGGESFDRIQRFY-HPG-VQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLI 285 (698)
T ss_pred eeEEecCC----ceEEEEE--eccceeeecCccHHHHHhcc-CCC-ceeeecCCccceEEEecCCccccCcccCCCceEE
Confidence 45789998 6777765 35667788655444445553 433 4667 9999888887542 26799
Q ss_pred EEeCCCCceeeEecC
Q psy14456 75 FWDLRTRGCTNVLTP 89 (93)
Q Consensus 75 ~~d~~~~~~~~~~~~ 89 (93)
+||+++|...+.|..
T Consensus 286 IWDI~tG~lkrsF~~ 300 (698)
T KOG2314|consen 286 IWDIATGLLKRSFPV 300 (698)
T ss_pred EEEccccchhcceec
Confidence 999999998887765
No 295
>PRK02888 nitrous-oxide reductase; Validated
Probab=96.73 E-value=0.023 Score=36.59 Aligned_cols=72 Identities=14% Similarity=0.142 Sum_probs=52.1
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCce------------eEEeeccccceEEEEecCCCEEEEecCCCc
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQA------------FQALSGHSGHVLSLYNWGGATVLSGSHDRT 72 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~------------~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~ 72 (93)
....+.++|+ +++++.++-.+..+.+.|+.+... .....--.+++..-|..++....|...|+.
T Consensus 322 sPHGV~vSPD----GkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevGlGPLHTaFDg~G~aytslf~dsq 397 (635)
T PRK02888 322 NPHGVNTSPD----GKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELGLGPLHTAFDGRGNAYTTLFLDSQ 397 (635)
T ss_pred CccceEECCC----CCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccCCCcceEEECCCCCEEEeEeecce
Confidence 3456888999 777777776799999999876442 233322233433338888888888889999
Q ss_pred EEEEeCCC
Q psy14456 73 VRFWDLRT 80 (93)
Q Consensus 73 i~~~d~~~ 80 (93)
+..||+.+
T Consensus 398 v~kwn~~~ 405 (635)
T PRK02888 398 IVKWNIEA 405 (635)
T ss_pred eEEEehHH
Confidence 99999876
No 296
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=96.67 E-value=0.012 Score=24.46 Aligned_cols=34 Identities=21% Similarity=0.314 Sum_probs=25.2
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT 39 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 39 (93)
++|.++.|+|+... .++++-+- ..+.+.++|+++
T Consensus 1 GAvR~~kFsP~~~~-~DLL~~~E-~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGG-NDLLAWAE-HQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCc-ccEEEEEc-cCCeEEEEEccc
Confidence 57899999986311 25666665 589999999885
No 297
>KOG0309|consensus
Probab=96.67 E-value=0.0022 Score=41.78 Aligned_cols=71 Identities=27% Similarity=0.450 Sum_probs=52.1
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCc-eeEEeeccccceEEE-Eec-CCCEEEEecCCCcEEEEeCCCC
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQ-AFQALSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~-~~~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d~~~~ 81 (93)
...++|.-. ...++++. ....+.+||.+.+. ++..+++|...++.+ |.. ....+.+++.|++++.||+.+.
T Consensus 161 asqVkwnyk----~p~vlass-hg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kS 234 (1081)
T KOG0309|consen 161 ASQVKWNYK----DPNVLASS-HGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKS 234 (1081)
T ss_pred Cceeeeccc----Ccchhhhc-cCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeeccccc
Confidence 345566544 33344444 48889999999875 467888898888888 766 3455678899999999999865
No 298
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=96.62 E-value=0.063 Score=32.16 Aligned_cols=71 Identities=15% Similarity=0.220 Sum_probs=52.5
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCcee----EEeeccccceEEE-EecCCCEEEEec-CCCcEEEEeCC
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAF----QALSGHSGHVLSL-YNWGGATVLSGS-HDRTVRFWDLR 79 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~----~~~~~~~~~v~~~-~~~~~~~~~s~~-~~~~i~~~d~~ 79 (93)
+-...+.|+ ++++++....--.+.+|++..+... ..+ .-.+....| |+|+++.....+ .+++|.+|++.
T Consensus 147 ~H~a~~tP~----~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v-~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~ 221 (346)
T COG2706 147 VHSANFTPD----GRYLVVPDLGTDRIFLYDLDDGKLTPADPAEV-KPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYN 221 (346)
T ss_pred cceeeeCCC----CCEEEEeecCCceEEEEEcccCcccccccccc-CCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEc
Confidence 667778888 7888888766778999999876542 122 233455778 999998776555 78999999988
Q ss_pred CC
Q psy14456 80 TR 81 (93)
Q Consensus 80 ~~ 81 (93)
..
T Consensus 222 ~~ 223 (346)
T COG2706 222 PA 223 (346)
T ss_pred CC
Confidence 73
No 299
>KOG0882|consensus
Probab=96.58 E-value=0.0015 Score=40.07 Aligned_cols=78 Identities=21% Similarity=0.289 Sum_probs=58.1
Q ss_pred CCccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC--C-ceeEEeeccccceEEE-EecCCCEEEEecC-CCcEEE
Q psy14456 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT--G-QAFQALSGHSGHVLSL-YNWGGATVLSGSH-DRTVRF 75 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~--~-~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~-~~~i~~ 75 (93)
||.+.|+.+...- .++++++. .||.++.|.... + .-+..+..|...+..+ .+.++.++.|++. |..+++
T Consensus 7 mhrd~i~hv~~tk-----a~fiiqAS-lDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~Kv 80 (558)
T KOG0882|consen 7 MHRDVITHVFPTK-----AKFIIQAS-LDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKV 80 (558)
T ss_pred cccceeeeEeeeh-----hheEEeee-cchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeE
Confidence 7888898876553 46666655 699999997543 2 2234556788888888 7889999999776 999999
Q ss_pred EeCCCCcee
Q psy14456 76 WDLRTRGCT 84 (93)
Q Consensus 76 ~d~~~~~~~ 84 (93)
+|++.-...
T Consensus 81 fDvEn~Dmi 89 (558)
T KOG0882|consen 81 FDVENFDMI 89 (558)
T ss_pred EEeeccchh
Confidence 998865444
No 300
>KOG2041|consensus
Probab=96.58 E-value=0.0082 Score=39.26 Aligned_cols=73 Identities=19% Similarity=0.199 Sum_probs=55.6
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeec--cccceEEE-EecCCCEEEEecCCCcEEEEeC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSG--HSGHVLSL-YNWGGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~--~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~ 78 (93)
|.+.|.-+.|... .+++-++. .+|.|.+|-+-.++-...+.. .++.|.++ |+.+|+.++..-.||.+.+=.+
T Consensus 70 H~~sV~vvTWNe~----~QKLTtSD-t~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsv 144 (1189)
T KOG2041|consen 70 HNASVMVVTWNEN----NQKLTTSD-TSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSV 144 (1189)
T ss_pred CcceEEEEEeccc----cccccccC-CCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEee
Confidence 7889999999877 67777776 699999999877765433322 34567788 9999999988888888777554
Q ss_pred C
Q psy14456 79 R 79 (93)
Q Consensus 79 ~ 79 (93)
.
T Consensus 145 d 145 (1189)
T KOG2041|consen 145 D 145 (1189)
T ss_pred c
Confidence 4
No 301
>KOG3621|consensus
Probab=96.57 E-value=0.01 Score=38.32 Aligned_cols=70 Identities=16% Similarity=0.195 Sum_probs=50.5
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCcee-----EEe-eccccceEEE-EecCCCEEEEecCCCcEEEEeC
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAF-----QAL-SGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~-----~~~-~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~ 78 (93)
+..+..+++ +++++.|...|.|.++.++.+... ..+ +.|...|+++ |++++..+++|...|.+.+-.+
T Consensus 79 ~~~~~vs~~-----e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L 153 (726)
T KOG3621|consen 79 TCVRSVSSV-----EYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTEL 153 (726)
T ss_pred EEEEEecch-----hHhhhhhcCCceEEeehhhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEe
Confidence 344455554 556666667999999987754321 111 2467899999 9999999999999999988776
Q ss_pred CC
Q psy14456 79 RT 80 (93)
Q Consensus 79 ~~ 80 (93)
.+
T Consensus 154 ~s 155 (726)
T KOG3621|consen 154 DS 155 (726)
T ss_pred ch
Confidence 65
No 302
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=96.38 E-value=0.021 Score=35.76 Aligned_cols=80 Identities=14% Similarity=0.094 Sum_probs=55.5
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCC-------------
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHD------------- 70 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~------------- 70 (93)
++....|+|. +.++++. ....|.+|.-...-.+..+. ...+..+ |+|.+.+|.+=...
T Consensus 34 p~~~~~~SP~----G~~l~~~--~~~~V~~~~g~~~~~l~~~~--~~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~ 105 (561)
T COG5354 34 PVAYVSESPL----GTYLFSE--HAAGVECWGGPSKAKLVRFR--HPDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFT 105 (561)
T ss_pred chhheeecCc----chheehh--hccceEEccccchhheeeee--cCCceecccCcccceeeeeccCCccChhhccCCcc
Confidence 4667788887 6666664 36678888766555444442 3456777 89998888774332
Q ss_pred --CcEEEEeCCCCceeeEecCccC
Q psy14456 71 --RTVRFWDLRTRGCTNVLTPITV 92 (93)
Q Consensus 71 --~~i~~~d~~~~~~~~~~~~~~~ 92 (93)
..+.+||+.++..+..|.....
T Consensus 106 ~~n~~~vwd~~sg~iv~sf~~~~q 129 (561)
T COG5354 106 SKNNVFVWDIASGMIVFSFNGISQ 129 (561)
T ss_pred ccCceeEEeccCceeEeeccccCC
Confidence 2599999999998888876543
No 303
>KOG4640|consensus
Probab=96.33 E-value=0.015 Score=37.13 Aligned_cols=52 Identities=19% Similarity=0.297 Sum_probs=37.8
Q ss_pred Ccccee-EEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEe-eccccceEEE-Ee
Q psy14456 2 HDGTVR-DVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQAL-SGHSGHVLSL-YN 58 (93)
Q Consensus 2 h~~~v~-~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~-~~~~~~v~~~-~~ 58 (93)
|...++ +++|.|+ ++.++.+- .||+|++.|+.++..+... ......+.++ |+
T Consensus 60 p~~~v~~sL~W~~D----GkllaVg~-kdG~I~L~Dve~~~~l~~~~~s~e~~is~~~w~ 114 (665)
T KOG4640|consen 60 PGENVTASLCWRPD----GKLLAVGF-KDGTIRLHDVEKGGRLVSFLFSVETDISKGIWD 114 (665)
T ss_pred CCCccceeeeecCC----CCEEEEEe-cCCeEEEEEccCCCceeccccccccchheeecc
Confidence 455666 9999999 67666655 6999999999998776653 2344556666 64
No 304
>KOG1354|consensus
Probab=96.32 E-value=0.017 Score=34.61 Aligned_cols=75 Identities=16% Similarity=0.208 Sum_probs=55.0
Q ss_pred CCccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC-ce--eEEeeccc-----cceEEE-Eec-CCCEEEEecCC
Q psy14456 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG-QA--FQALSGHS-----GHVLSL-YNW-GGATVLSGSHD 70 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~-~~--~~~~~~~~-----~~v~~~-~~~-~~~~~~s~~~~ 70 (93)
.|+-.|.++++..+ ...++++ .|-.|.+|.++.. ++ +.-++.++ ..|++- |+| ..++++-.+..
T Consensus 162 aHtyhiNSIS~NsD----~Et~lSA--DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSK 235 (433)
T KOG1354|consen 162 AHTYHINSISVNSD----KETFLSA--DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSK 235 (433)
T ss_pred cceeEeeeeeecCc----cceEeec--cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCC
Confidence 36777889988877 6777775 3999999998744 32 22334443 346677 998 56788888889
Q ss_pred CcEEEEeCCCC
Q psy14456 71 RTVRFWDLRTR 81 (93)
Q Consensus 71 ~~i~~~d~~~~ 81 (93)
|.|++-|+|+.
T Consensus 236 GtIrLcDmR~~ 246 (433)
T KOG1354|consen 236 GTIRLCDMRQS 246 (433)
T ss_pred CcEEEeechhh
Confidence 99999999954
No 305
>KOG4649|consensus
Probab=96.27 E-value=0.098 Score=30.56 Aligned_cols=66 Identities=21% Similarity=0.298 Sum_probs=49.1
Q ss_pred ceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE--EecCCCEEEEecCCCcEEEEeCCCCceeeEe
Q psy14456 20 SLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL--YNWGGATVLSGSHDRTVRFWDLRTRGCTNVL 87 (93)
Q Consensus 20 ~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~ 87 (93)
+.++. |+..+.+.+.+.++|+....+..-. .+.+. ..+++.++..+++|+.....|+++..++...
T Consensus 64 dfVV~-GCy~g~lYfl~~~tGs~~w~f~~~~-~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVyks 131 (354)
T KOG4649|consen 64 DFVVL-GCYSGGLYFLCVKTGSQIWNFVILE-TVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKS 131 (354)
T ss_pred CEEEE-EEccCcEEEEEecchhheeeeeehh-hhccceEEcCCCceEEEecCCCcEEEecccccceEEec
Confidence 44444 4479999999999997776665322 22222 6778999999999999999999988776653
No 306
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=95.94 E-value=0.17 Score=30.44 Aligned_cols=67 Identities=12% Similarity=0.074 Sum_probs=41.7
Q ss_pred eEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEEEecCCCEEEEecCCCcEEEEeCCCCceeeEec
Q psy14456 21 LLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 21 ~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~ 88 (93)
.++... .++.+..+|..+++.+.....-......-....+..++.++.++.+.++|..+++.+..+.
T Consensus 281 ~vyv~~-~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i~g~~l~~~~~~G~l~~~d~~tG~~~~~~~ 347 (377)
T TIGR03300 281 RLYVTD-ADGVVVALDRRSGSELWKNDELKYRQLTAPAVVGGYLVVGDFEGYLHWLSREDGSFVARLK 347 (377)
T ss_pred EEEEEC-CCCeEEEEECCCCcEEEccccccCCccccCEEECCEEEEEeCCCEEEEEECCCCCEEEEEE
Confidence 344433 4788888888777665433211111111111135678888899999999999998876665
No 307
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=95.87 E-value=0.16 Score=29.64 Aligned_cols=67 Identities=15% Similarity=0.071 Sum_probs=45.5
Q ss_pred cceEEEeeeCCCeEEEEeCCCC--ceeEEeecccc---ceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEec
Q psy14456 19 SSLLISGGAGDCKIYVTDCATG--QAFQALSGHSG---HVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 19 ~~~~~~~g~~~~~v~~~~~~~~--~~~~~~~~~~~---~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~ 88 (93)
++.++.. +|..|.+...+.. .++...+..++ .-..+ |+|++.+++.+...|+|.++|+.. ..+..+.
T Consensus 9 Gk~lAi~--qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g-~~lf~I~ 81 (282)
T PF15492_consen 9 GKLLAIL--QDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMG-SELFVIP 81 (282)
T ss_pred CcEEEEE--eccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEeccc-ceeEEcC
Confidence 5655554 6888888776654 33343333322 23466 999999999999999999999874 4444444
No 308
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=95.85 E-value=0.043 Score=22.78 Aligned_cols=30 Identities=17% Similarity=0.135 Sum_probs=23.4
Q ss_pred ceEEE-EecCC---CEEEEecCCCcEEEEeCCCC
Q psy14456 52 HVLSL-YNWGG---ATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 52 ~v~~~-~~~~~---~~~~s~~~~~~i~~~d~~~~ 81 (93)
.+.++ |+|.+ .+|+-.-..+.+.++|++++
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~ 35 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN 35 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence 46788 99743 47777778899999999964
No 309
>KOG3914|consensus
Probab=95.81 E-value=0.053 Score=32.87 Aligned_cols=53 Identities=11% Similarity=0.218 Sum_probs=38.8
Q ss_pred CCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCc
Q psy14456 29 DCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRG 82 (93)
Q Consensus 29 ~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~ 82 (93)
...+.+|....+.+ ..+.+|-+.+..+ ++++++.++++..|..|++-.+..-.
T Consensus 131 ~~~~di~s~~~~~~-~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f 184 (390)
T KOG3914|consen 131 VYSFDILSADSGRC-EPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATF 184 (390)
T ss_pred ceeeeeecccccCc-chhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCccc
Confidence 34444544444333 3345899999999 99999999999999999997766543
No 310
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=95.76 E-value=0.16 Score=28.70 Aligned_cols=78 Identities=13% Similarity=0.119 Sum_probs=51.7
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC-c-e--eE---EeeccccceEEE-EecCCCEEEEecCCCcEEEEe
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG-Q-A--FQ---ALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~-~-~--~~---~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d 77 (93)
...++|+|+ ++.++.+.+..+.|..++++.. . . .. .+..-.+..-.+ +..++++.++....+.|.++|
T Consensus 136 pNGi~~s~d----g~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~ 211 (246)
T PF08450_consen 136 PNGIAFSPD----GKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFD 211 (246)
T ss_dssp EEEEEEETT----SSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEE
T ss_pred ccceEECCc----chheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEEC
Confidence 467899998 6666655556888888887532 2 1 12 222222235567 888999888888889999999
Q ss_pred CCCCceeeEec
Q psy14456 78 LRTRGCTNVLT 88 (93)
Q Consensus 78 ~~~~~~~~~~~ 88 (93)
.+ |+.+..+.
T Consensus 212 p~-G~~~~~i~ 221 (246)
T PF08450_consen 212 PD-GKLLREIE 221 (246)
T ss_dssp TT-SCEEEEEE
T ss_pred CC-ccEEEEEc
Confidence 87 77666554
No 311
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=95.69 E-value=0.29 Score=31.03 Aligned_cols=74 Identities=18% Similarity=0.208 Sum_probs=52.5
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCC-eEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDC-KIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~-~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~ 81 (93)
+.|.-..+.-+ .+.++.+ ..|| .+-+++.++++. +.+...-+.|..+ .+++|..++.+.....+.+.|+.++
T Consensus 360 ~~VrY~r~~~~----~e~~vig-t~dgD~l~iyd~~~~e~-kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididng 433 (668)
T COG4946 360 GGVRYRRIQVD----PEGDVIG-TNDGDKLGIYDKDGGEV-KRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNG 433 (668)
T ss_pred CceEEEEEccC----CcceEEe-ccCCceEEEEecCCceE-EEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCC
Confidence 33444444444 3334443 3577 899999887764 4455566788888 9999999999998899999999987
Q ss_pred ce
Q psy14456 82 GC 83 (93)
Q Consensus 82 ~~ 83 (93)
..
T Consensus 434 nv 435 (668)
T COG4946 434 NV 435 (668)
T ss_pred Ce
Confidence 54
No 312
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=95.63 E-value=0.019 Score=34.13 Aligned_cols=81 Identities=12% Similarity=0.247 Sum_probs=50.8
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCce------e----------EEeeccccceEEE-EecCCCEEEEe
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQA------F----------QALSGHSGHVLSL-YNWGGATVLSG 67 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~------~----------~~~~~~~~~v~~~-~~~~~~~~~s~ 67 (93)
-|++..|+|.. ...+.-+. ..|.|.+-|++.... + .-+.+-...+..+ |++.++++++.
T Consensus 223 VItSaeFhp~~---cn~fmYSs-SkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsR 298 (460)
T COG5170 223 VITSAEFHPEM---CNVFMYSS-SKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSR 298 (460)
T ss_pred HHhhcccCHhH---cceEEEec-CCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEe
Confidence 35666778763 22333333 489999999873210 1 1111223566788 99999999876
Q ss_pred cCCCcEEEEeCCC-CceeeEecCc
Q psy14456 68 SHDRTVRFWDLRT-RGCTNVLTPI 90 (93)
Q Consensus 68 ~~~~~i~~~d~~~-~~~~~~~~~~ 90 (93)
+. -++++||.+- ..+++++..|
T Consensus 299 dy-ltvkiwDvnm~k~pikTi~~h 321 (460)
T COG5170 299 DY-LTVKIWDVNMAKNPIKTIPMH 321 (460)
T ss_pred cc-ceEEEEecccccCCceeechH
Confidence 43 5789999985 4467766544
No 313
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=95.51 E-value=0.23 Score=30.00 Aligned_cols=58 Identities=14% Similarity=0.139 Sum_probs=39.1
Q ss_pred eEEEEeCCCCceeEEeeccccceEEE-EecCCC-EEEEe-cCCCcEEEEeCCCCceeeEecC
Q psy14456 31 KIYVTDCATGQAFQALSGHSGHVLSL-YNWGGA-TVLSG-SHDRTVRFWDLRTRGCTNVLTP 89 (93)
Q Consensus 31 ~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~-~~~s~-~~~~~i~~~d~~~~~~~~~~~~ 89 (93)
.|.++|+.+++.+..+.- ..++.++ .+.+.. +|++. ..++.+.+||..+|+.++.+.+
T Consensus 270 eVWv~D~~t~krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~ 330 (342)
T PF06433_consen 270 EVWVYDLKTHKRVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQ 330 (342)
T ss_dssp EEEEEETTTTEEEEEEEE-EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE--
T ss_pred EEEEEECCCCeEEEEEeC-CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhc
Confidence 366778888888887752 2345577 777544 45443 4689999999999999888765
No 314
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=95.47 E-value=0.35 Score=30.67 Aligned_cols=73 Identities=14% Similarity=0.129 Sum_probs=48.7
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCC---CcEEEEeC
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHD---RTVRFWDL 78 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~---~~i~~~d~ 78 (93)
.++|...+|.|.+ ..+.+.+|-.+-.+.++|++.. ....+. ...-..+ |+|.+++++.++.| +.+-+||.
T Consensus 274 ~~pVhdf~W~p~S---~~F~vi~g~~pa~~s~~~lr~N-l~~~~P--e~~rNT~~fsp~~r~il~agF~nl~gni~i~~~ 347 (561)
T COG5354 274 KDPVHDFTWEPLS---SRFAVISGYMPASVSVFDLRGN-LRFYFP--EQKRNTIFFSPHERYILFAGFDNLQGNIEIFDP 347 (561)
T ss_pred cccceeeeecccC---CceeEEecccccceeecccccc-eEEecC--CcccccccccCcccEEEEecCCccccceEEecc
Confidence 4789999999984 4444555566888999998766 333332 2222345 88888888776644 66788877
Q ss_pred CCC
Q psy14456 79 RTR 81 (93)
Q Consensus 79 ~~~ 81 (93)
...
T Consensus 348 ~~r 350 (561)
T COG5354 348 AGR 350 (561)
T ss_pred CCc
Confidence 654
No 315
>KOG2444|consensus
Probab=95.29 E-value=0.077 Score=30.12 Aligned_cols=59 Identities=20% Similarity=0.257 Sum_probs=39.7
Q ss_pred EEEeeeCCCeEEEEeCCCCceeEEeeccc-cceEEE-EecCCCEEEEe--cCCCcEEEEeCCC
Q psy14456 22 LISGGAGDCKIYVTDCATGQAFQALSGHS-GHVLSL-YNWGGATVLSG--SHDRTVRFWDLRT 80 (93)
Q Consensus 22 ~~~~g~~~~~v~~~~~~~~~~~~~~~~~~-~~v~~~-~~~~~~~~~s~--~~~~~i~~~d~~~ 80 (93)
+..++..++.++.|+....+.+...-.|+ ...... ....+..+... +.|..++.|++..
T Consensus 116 ~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 116 LGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred eeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence 44445579999999988877766555565 333333 44455666666 7788888888765
No 316
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=95.21 E-value=0.35 Score=29.02 Aligned_cols=71 Identities=17% Similarity=0.244 Sum_probs=47.5
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCc--e--eEEee-ccccceEEE-EecCCCEEE-EecCCCcEEEEe
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQ--A--FQALS-GHSGHVLSL-YNWGGATVL-SGSHDRTVRFWD 77 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~--~--~~~~~-~~~~~v~~~-~~~~~~~~~-s~~~~~~i~~~d 77 (93)
...++.++|+ ++.+++.......|.+|+++... . ...+. ........+ |++++..+. ..-.++.|.+++
T Consensus 145 h~H~v~~~pd----g~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~ 220 (345)
T PF10282_consen 145 HPHQVVFSPD----GRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFD 220 (345)
T ss_dssp CEEEEEE-TT----SSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEE
T ss_pred cceeEEECCC----CCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEe
Confidence 3567899998 77777776667789999987654 2 12222 233455678 999988765 445788999998
Q ss_pred CC
Q psy14456 78 LR 79 (93)
Q Consensus 78 ~~ 79 (93)
+.
T Consensus 221 ~~ 222 (345)
T PF10282_consen 221 YD 222 (345)
T ss_dssp EE
T ss_pred ec
Confidence 88
No 317
>KOG2314|consensus
Probab=94.86 E-value=0.23 Score=31.88 Aligned_cols=61 Identities=10% Similarity=0.106 Sum_probs=41.0
Q ss_pred ceeEEEEEecCCCCcceEEEeee--CCCeEEEEeCCCCceeEE-eeccccceEEE-EecCCCEEEEecCC
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGA--GDCKIYVTDCATGQAFQA-LSGHSGHVLSL-YNWGGATVLSGSHD 70 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~--~~~~v~~~~~~~~~~~~~-~~~~~~~v~~~-~~~~~~~~~s~~~~ 70 (93)
..+.+.|+|. +.+++.++. ..|.+.++|..-..+... ...|. ..+.+ |.|.|+++.+++..
T Consensus 494 ~~N~vfwsPk----G~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~eh~-~at~veWDPtGRYvvT~ss~ 558 (698)
T KOG2314|consen 494 FANTVFWSPK----GRFVVVAALVSRRGDLEFYDTDYADLKDTASPEHF-AATEVEWDPTGRYVVTSSSS 558 (698)
T ss_pred ccceEEEcCC----CcEEEEEEecccccceEEEecchhhhhhccCcccc-ccccceECCCCCEEEEeeeh
Confidence 4578899998 788776663 478899998764322211 11232 23567 99999999988754
No 318
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=94.78 E-value=0.33 Score=31.07 Aligned_cols=36 Identities=11% Similarity=0.146 Sum_probs=30.5
Q ss_pred ccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCce
Q psy14456 48 GHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGC 83 (93)
Q Consensus 48 ~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~ 83 (93)
...+.+.+. ++|+...++.|+.|+.+.+||...+..
T Consensus 257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t 293 (545)
T PF11768_consen 257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVT 293 (545)
T ss_pred ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCee
Confidence 456677777 999999999999999999999887643
No 319
>PRK04043 tolB translocation protein TolB; Provisional
Probab=94.58 E-value=0.63 Score=28.90 Aligned_cols=77 Identities=16% Similarity=0.076 Sum_probs=44.5
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCC--CeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEec-CCC--cEEEEeC
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGD--CKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGS-HDR--TVRFWDL 78 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~--~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~-~~~--~i~~~d~ 78 (93)
......|+|+ ++.++...+.+ ..|.++++..+.. ..+.......... |+|+++.++-.+ ..+ .|.+.|+
T Consensus 234 ~~~~~~~SPD----G~~la~~~~~~g~~~Iy~~dl~~g~~-~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl 308 (419)
T PRK04043 234 MLVVSDVSKD----GSKLLLTMAPKGQPDIYLYDTNTKTL-TQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKL 308 (419)
T ss_pred cEEeeEECCC----CCEEEEEEccCCCcEEEEEECCCCcE-EEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEEC
Confidence 3556789999 55544333234 4567777776653 3343333322334 899998665433 333 6777788
Q ss_pred CCCceeeE
Q psy14456 79 RTRGCTNV 86 (93)
Q Consensus 79 ~~~~~~~~ 86 (93)
.++...+.
T Consensus 309 ~~g~~~rl 316 (419)
T PRK04043 309 NSGSVEQV 316 (419)
T ss_pred CCCCeEeC
Confidence 77765443
No 320
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=94.53 E-value=0.21 Score=31.79 Aligned_cols=28 Identities=29% Similarity=0.595 Sum_probs=24.8
Q ss_pred CCCEEEEecCCCcEEEEeCCCCceeeEe
Q psy14456 60 GGATVLSGSHDRTVRFWDLRTRGCTNVL 87 (93)
Q Consensus 60 ~~~~~~s~~~~~~i~~~d~~~~~~~~~~ 87 (93)
+..++++.+.|+.+++||+.++.++...
T Consensus 229 ~~~~l~tl~~D~~LRiW~l~t~~~~~~~ 256 (547)
T PF11715_consen 229 DDTFLFTLSRDHTLRIWSLETGQCLATI 256 (547)
T ss_dssp TTTEEEEEETTSEEEEEETTTTCEEEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEe
Confidence 5678889999999999999999997665
No 321
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=94.32 E-value=0.42 Score=32.11 Aligned_cols=56 Identities=18% Similarity=0.224 Sum_probs=38.2
Q ss_pred eEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeC
Q psy14456 21 LLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 21 ~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~ 78 (93)
.++. |+.+|.||+||-...+....+.+-..+|..+ .+.+|.+++.-+ +..+.+++.
T Consensus 590 ~iav-gs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc-~tyLlLi~t 646 (794)
T PF08553_consen 590 YIAV-GSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATC-KTYLLLIDT 646 (794)
T ss_pred eEEE-EeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEee-cceEEEEEE
Confidence 3444 4469999999943333334455667899999 999999876443 556666664
No 322
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=94.22 E-value=0.76 Score=28.40 Aligned_cols=71 Identities=17% Similarity=0.188 Sum_probs=44.9
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEe--ec------cccceEEE-Eec-----CC---CEEE
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQAL--SG------HSGHVLSL-YNW-----GG---ATVL 65 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~--~~------~~~~v~~~-~~~-----~~---~~~~ 65 (93)
+++|++++.+.-| |++.|.++|.+.+.|++....++.- .. ....+.++ |.. ++ -.++
T Consensus 86 ~g~vtal~~S~iG------Fvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~ 159 (395)
T PF08596_consen 86 QGPVTALKNSDIG------FVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLL 159 (395)
T ss_dssp S-SEEEEEE-BTS------EEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEE
T ss_pred CCcEeEEecCCCc------EEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEE
Confidence 6889999998652 5666668999999999766655432 11 22345566 653 22 3466
Q ss_pred EecCCCcEEEEeCC
Q psy14456 66 SGSHDRTVRFWDLR 79 (93)
Q Consensus 66 s~~~~~~i~~~d~~ 79 (93)
.|...|.+.+|.+.
T Consensus 160 vGTn~G~v~~fkIl 173 (395)
T PF08596_consen 160 VGTNSGNVLTFKIL 173 (395)
T ss_dssp EEETTSEEEEEEEE
T ss_pred EEeCCCCEEEEEEe
Confidence 77778988888765
No 323
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=94.21 E-value=0.35 Score=24.44 Aligned_cols=69 Identities=22% Similarity=0.354 Sum_probs=38.9
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEEEecCCCEEEEecCCCcEEEEeC
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~ 78 (93)
|+++++..-.....+.++.+ +.|..|++|+-+ ..+..+.. .+.+..+....+..++.+..+|+|-+|+-
T Consensus 2 V~al~~~d~d~dg~~eLlvG-s~D~~IRvf~~~--e~~~Ei~e-~~~v~~L~~~~~~~F~Y~l~NGTVGvY~~ 70 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVG-SDDFEIRVFKGD--EIVAEITE-TDKVTSLCSLGGGRFAYALANGTVGVYDR 70 (111)
T ss_pred eeEEEEEecCCCCcceEEEe-cCCcEEEEEeCC--cEEEEEec-ccceEEEEEcCCCEEEEEecCCEEEEEeC
Confidence 56666655221112344544 479999998743 44555543 34445552224466777777777766654
No 324
>PRK04043 tolB translocation protein TolB; Provisional
Probab=94.21 E-value=0.78 Score=28.50 Aligned_cols=74 Identities=12% Similarity=0.115 Sum_probs=45.8
Q ss_pred ceeEEEEEecCCCCcce-EE-Eeee-CCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEE-EecCC--CcEEEEe
Q psy14456 5 TVRDVCFIEDTSNKSSL-LI-SGGA-GDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVL-SGSHD--RTVRFWD 77 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~-~~-~~g~-~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~-s~~~~--~~i~~~d 77 (93)
......|+|+ ++. ++ ++.. ++..|.++|+.+++...... ..+..... |+|++..++ +.+.+ ..+.++|
T Consensus 189 ~~~~p~wSpD----G~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d 263 (419)
T PRK04043 189 LNIFPKWANK----EQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYD 263 (419)
T ss_pred CeEeEEECCC----CCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeEECCCCCEEEEEEccCCCcEEEEEE
Confidence 4567899999 542 44 3332 25678888988876544332 33444455 999987664 44333 5677778
Q ss_pred CCCCce
Q psy14456 78 LRTRGC 83 (93)
Q Consensus 78 ~~~~~~ 83 (93)
+..+..
T Consensus 264 l~~g~~ 269 (419)
T PRK04043 264 TNTKTL 269 (419)
T ss_pred CCCCcE
Confidence 877653
No 325
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=94.08 E-value=0.54 Score=26.17 Aligned_cols=60 Identities=18% Similarity=0.094 Sum_probs=39.0
Q ss_pred CCeEEEEeCCCCceeEEeecc--ccceEEEEecCCCEEEEecCCCcEEEEeCCCCceeeEec
Q psy14456 29 DCKIYVTDCATGQAFQALSGH--SGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 29 ~~~v~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~ 88 (93)
++.|..+|.++++.+-...-- .....+....++..++.++.++.+..||..+|+.+..+.
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~ 63 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVASGDGNLYALDAKTGKVLWRFD 63 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEEETTSEEEEEETTTSEEEEEEE
T ss_pred CCEEEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEEcCCCEEEEEECCCCCEEEEee
Confidence 678888898888877655321 122121122245566666788999999998888765554
No 326
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=94.08 E-value=0.73 Score=28.94 Aligned_cols=56 Identities=18% Similarity=0.161 Sum_probs=33.9
Q ss_pred cceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 19 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
+..++..+ ++.|.+||..+++.+..+... .+..+ |++++.+++-.+.+ .+.+++..
T Consensus 117 G~LL~~~~--~~~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~-~i~il~~~ 173 (443)
T PF04053_consen 117 GNLLGVKS--SDFICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTKD-SIYILKYN 173 (443)
T ss_dssp SSSEEEEE--TTEEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S--SEEEEEE-
T ss_pred CcEEEEEC--CCCEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeCC-eEEEEEec
Confidence 35555554 568999999999998888633 37788 99999988877644 55555443
No 327
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=93.85 E-value=0.9 Score=29.14 Aligned_cols=61 Identities=13% Similarity=0.021 Sum_probs=40.6
Q ss_pred CCeEEEEeCCCCceeEEeeccccceEEEEecCCCEEEEecCCCcEEEEeCCCCceeeEecC
Q psy14456 29 DCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRGCTNVLTP 89 (93)
Q Consensus 29 ~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~ 89 (93)
-+.+..+|+.+++.+-..............-.+.+++.+..++.++++|.++|+.+..++.
T Consensus 440 ~g~l~AiD~~tGk~~W~~~~~~p~~~~~l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~ 500 (527)
T TIGR03075 440 MGSLIAWDPITGKIVWEHKEDFPLWGGVLATAGDLVFYGTLEGYFKAFDAKTGEELWKFKT 500 (527)
T ss_pred ceeEEEEeCCCCceeeEecCCCCCCCcceEECCcEEEEECCCCeEEEEECCCCCEeEEEeC
Confidence 3568888888887765543211111111222455777788899999999999998877653
No 328
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=93.66 E-value=0.2 Score=30.02 Aligned_cols=74 Identities=18% Similarity=0.251 Sum_probs=51.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCce---eEEeeccc-----cceEEE-EecC-CCEEEEecCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQA---FQALSGHS-----GHVLSL-YNWG-GATVLSGSHDR 71 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~---~~~~~~~~-----~~v~~~-~~~~-~~~~~s~~~~~ 71 (93)
|+-.+.+++|..+ .+.++++ .+-.|.+|.+..... +..++.|+ ..+++. |+|. .+.+--.+..|
T Consensus 171 H~yhiNSiS~NsD----~et~lSa--DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG 244 (460)
T COG5170 171 HPYHINSISFNSD----KETLLSA--DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKG 244 (460)
T ss_pred ceeEeeeeeecCc----hheeeec--cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCC
Confidence 5667888888777 6777775 489999999874322 33344554 345666 8884 45666667889
Q ss_pred cEEEEeCCCC
Q psy14456 72 TVRFWDLRTR 81 (93)
Q Consensus 72 ~i~~~d~~~~ 81 (93)
.|++-|+|+.
T Consensus 245 ~Ikl~DlRq~ 254 (460)
T COG5170 245 EIKLNDLRQS 254 (460)
T ss_pred cEEehhhhhh
Confidence 9999999954
No 329
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=93.56 E-value=0.55 Score=29.97 Aligned_cols=27 Identities=19% Similarity=0.324 Sum_probs=21.4
Q ss_pred cceEEEeeeCCCeEEEEeCCCCceeEEe
Q psy14456 19 SSLLISGGAGDCKIYVTDCATGQAFQAL 46 (93)
Q Consensus 19 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~ 46 (93)
..++++.. +|+.+++||+.+++++...
T Consensus 230 ~~~l~tl~-~D~~LRiW~l~t~~~~~~~ 256 (547)
T PF11715_consen 230 DTFLFTLS-RDHTLRIWSLETGQCLATI 256 (547)
T ss_dssp TTEEEEEE-TTSEEEEEETTTTCEEEEE
T ss_pred CCEEEEEe-CCCeEEEEECCCCeEEEEe
Confidence 56666665 7999999999999885544
No 330
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=93.29 E-value=1 Score=26.89 Aligned_cols=39 Identities=21% Similarity=0.311 Sum_probs=32.3
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEe
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQAL 46 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~ 46 (93)
+.+-+++++++ +..+++++.+.+.+.+||..++..+...
T Consensus 217 ~Y~gSIa~~~~----g~~ia~tsPrGg~~~~~d~~tg~~~~~~ 255 (305)
T PF07433_consen 217 GYIGSIAADRD----GRLIAVTSPRGGRVAVWDAATGRLLGSV 255 (305)
T ss_pred CceEEEEEeCC----CCEEEEECCCCCEEEEEECCCCCEeecc
Confidence 56788999988 6778777788999999999999876654
No 331
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=93.19 E-value=0.72 Score=28.78 Aligned_cols=72 Identities=15% Similarity=0.129 Sum_probs=41.1
Q ss_pred eEEEEEecCCCCcceEEEeeeCCCeEEEEeC--CCCceeEEeeccccceEEE-EecCCCEEEEe-cCCCc--EEEEeCCC
Q psy14456 7 RDVCFIEDTSNKSSLLISGGAGDCKIYVTDC--ATGQAFQALSGHSGHVLSL-YNWGGATVLSG-SHDRT--VRFWDLRT 80 (93)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~-~~~~~--i~~~d~~~ 80 (93)
..-+|+|+ +++++-+..+++...+|-+ ..+. +..+....+.-..- |+|+|+.++-. +..+. |.+.+...
T Consensus 241 ~~P~fspD----G~~l~f~~~rdg~~~iy~~dl~~~~-~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g 315 (425)
T COG0823 241 GAPAFSPD----GSKLAFSSSRDGSPDIYLMDLDGKN-LPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEG 315 (425)
T ss_pred CCccCCCC----CCEEEEEECCCCCccEEEEcCCCCc-ceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCC
Confidence 44578888 6777766667888776654 4444 33343222222223 89999887644 34444 44455555
Q ss_pred Cce
Q psy14456 81 RGC 83 (93)
Q Consensus 81 ~~~ 83 (93)
+..
T Consensus 316 ~~~ 318 (425)
T COG0823 316 SQV 318 (425)
T ss_pred Cce
Confidence 443
No 332
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=93.16 E-value=0.83 Score=25.42 Aligned_cols=67 Identities=19% Similarity=0.263 Sum_probs=43.2
Q ss_pred cceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEEEecCCCEEEEecCCCcEEEEeCCCCceeeEe
Q psy14456 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRGCTNVL 87 (93)
Q Consensus 19 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~ 87 (93)
+..++++. .++.+..+|..+|+.+..... ...+.......+..++.+..++.+..+|.++|..+..+
T Consensus 36 ~~~v~~~~-~~~~l~~~d~~tG~~~W~~~~-~~~~~~~~~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~ 102 (238)
T PF13360_consen 36 GGRVYVAS-GDGNLYALDAKTGKVLWRFDL-PGPISGAPVVDGGRVYVGTSDGSLYALDAKTGKVLWSI 102 (238)
T ss_dssp TTEEEEEE-TTSEEEEEETTTSEEEEEEEC-SSCGGSGEEEETTEEEEEETTSEEEEEETTTSCEEEEE
T ss_pred CCEEEEEc-CCCEEEEEECCCCCEEEEeec-cccccceeeecccccccccceeeeEecccCCcceeeee
Confidence 34455544 599999999999988766653 11111101113445555557779999999999887764
No 333
>KOG1832|consensus
Probab=93.16 E-value=0.28 Score=33.56 Aligned_cols=49 Identities=8% Similarity=0.282 Sum_probs=40.6
Q ss_pred eEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEecCcc
Q psy14456 43 FQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLTPIT 91 (93)
Q Consensus 43 ~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~ 91 (93)
...+..++...+|+ |+-+.+.++.|+..|.++++++.+|+.......|.
T Consensus 1094 w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~ 1143 (1516)
T KOG1832|consen 1094 WRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQ 1143 (1516)
T ss_pred chhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccc
Confidence 44566677888999 99999999999999999999999998766665553
No 334
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=93.12 E-value=1.2 Score=26.97 Aligned_cols=65 Identities=14% Similarity=0.086 Sum_probs=39.4
Q ss_pred ceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEEEecCCCEEEEecCCCcEEEEeCCCCceeeE
Q psy14456 20 SLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRGCTNV 86 (93)
Q Consensus 20 ~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~ 86 (93)
..++..+ .++.+..+|..+|+.+-...-........ ..++..++.++.++.+..+|..+|+.+..
T Consensus 66 ~~v~v~~-~~g~v~a~d~~tG~~~W~~~~~~~~~~~p-~v~~~~v~v~~~~g~l~ald~~tG~~~W~ 130 (377)
T TIGR03300 66 GKVYAAD-ADGTVVALDAETGKRLWRVDLDERLSGGV-GADGGLVFVGTEKGEVIALDAEDGKELWR 130 (377)
T ss_pred CEEEEEC-CCCeEEEEEccCCcEeeeecCCCCcccce-EEcCCEEEEEcCCCEEEEEECCCCcEeee
Confidence 3445544 48899999988887765443222111111 12455666677788888888887766543
No 335
>KOG1645|consensus
Probab=92.86 E-value=0.21 Score=30.81 Aligned_cols=48 Identities=17% Similarity=0.156 Sum_probs=36.8
Q ss_pred eEEeeccccceEEE-EecCCC-EEEEecCCCcEEEEeCCCCceeeEecCc
Q psy14456 43 FQALSGHSGHVLSL-YNWGGA-TVLSGSHDRTVRFWDLRTRGCTNVLTPI 90 (93)
Q Consensus 43 ~~~~~~~~~~v~~~-~~~~~~-~~~s~~~~~~i~~~d~~~~~~~~~~~~~ 90 (93)
..-+..+...|..+ |+|... ++..++.+..|++.|+++..+...+..+
T Consensus 186 sq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~ 235 (463)
T KOG1645|consen 186 SQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY 235 (463)
T ss_pred hhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc
Confidence 33344566678899 999666 6778899999999999998777766554
No 336
>KOG2066|consensus
Probab=92.69 E-value=1.4 Score=29.68 Aligned_cols=55 Identities=13% Similarity=0.129 Sum_probs=34.8
Q ss_pred cceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecC-----CCEEEEecCCCcEEEE
Q psy14456 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG-----GATVLSGSHDRTVRFW 76 (93)
Q Consensus 19 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~-----~~~~~s~~~~~~i~~~ 76 (93)
+.++++++ .||.+.+-.+.+......+. -.-++..+ ++|+ ...+++|+..| +.++
T Consensus 83 Gey~asCS-~DGkv~I~sl~~~~~~~~~d-f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~ 143 (846)
T KOG2066|consen 83 GEYVASCS-DDGKVVIGSLFTDDEITQYD-FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLS 143 (846)
T ss_pred CceEEEec-CCCcEEEeeccCCccceeEe-cCCcceeEEeccchhhhhhhheeecCcce-EEEe
Confidence 67777766 69999998877766554443 23345556 6665 34566776666 4444
No 337
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=92.05 E-value=1.6 Score=26.10 Aligned_cols=80 Identities=15% Similarity=0.156 Sum_probs=50.9
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCe-EEEEeCCCCceeEEeeccccc-eEE--EEecCCCEEEEec-----CCCcEEE
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCK-IYVTDCATGQAFQALSGHSGH-VLS--LYNWGGATVLSGS-----HDRTVRF 75 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~-v~~~~~~~~~~~~~~~~~~~~-v~~--~~~~~~~~~~s~~-----~~~~i~~ 75 (93)
+.-.++.+|. ....++.+-+.|. ..++|..+++....+....+. .+. +|++++++|++-- ..+.|-+
T Consensus 6 RgH~~a~~p~----~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgV 81 (305)
T PF07433_consen 6 RGHGVAAHPT----RPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGV 81 (305)
T ss_pred cccceeeCCC----CCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEE
Confidence 3445667775 3444444544444 568899999887766544332 222 2899999988753 3478999
Q ss_pred EeCC-CCceeeEec
Q psy14456 76 WDLR-TRGCTNVLT 88 (93)
Q Consensus 76 ~d~~-~~~~~~~~~ 88 (93)
||.. +...+..|.
T Consensus 82 yd~~~~~~ri~E~~ 95 (305)
T PF07433_consen 82 YDAARGYRRIGEFP 95 (305)
T ss_pred EECcCCcEEEeEec
Confidence 9998 444555554
No 338
>KOG1275|consensus
Probab=91.97 E-value=2.5 Score=29.27 Aligned_cols=72 Identities=18% Similarity=0.183 Sum_probs=52.2
Q ss_pred cceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEEEecCCCEEEEecCCCcEEEEeCCCCceeeEecCccC
Q psy14456 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRGCTNVLTPITV 92 (93)
Q Consensus 19 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~~ 92 (93)
.+.++.+|- ...+..+|+++.+......-..+.+.- .-..++.+++|...|+|.+-|.++.+.+.+|..|+.
T Consensus 147 ~~~~i~Gg~-Q~~li~~Dl~~~~e~r~~~v~a~~v~i-mR~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~ 218 (1118)
T KOG1275|consen 147 PSTLIMGGL-QEKLIHIDLNTEKETRTTNVSASGVTI-MRYNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSG 218 (1118)
T ss_pred Ccceeecch-hhheeeeecccceeeeeeeccCCceEE-EEecCcEEEeecccceEEeecCCcCceeeeeecccc
Confidence 456777775 556666688887766554333334433 344678999999999999999999999999988753
No 339
>KOG2066|consensus
Probab=91.92 E-value=0.44 Score=31.87 Aligned_cols=56 Identities=25% Similarity=0.245 Sum_probs=35.2
Q ss_pred EEEeeeCCCeEEEEeCCCCceeEEeeccccceEEEEecCCCEEEEecCCCcEEEEeCCCCcee
Q psy14456 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRGCT 84 (93)
Q Consensus 22 ~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~ 84 (93)
+++-|..+|.+++++.+-.. .....|... ..+|.++++|+.||.+.+..+-+....
T Consensus 51 ~~~~GtH~g~v~~~~~~~~~--~~~~~~s~~-----~~~Gey~asCS~DGkv~I~sl~~~~~~ 106 (846)
T KOG2066|consen 51 FFALGTHRGAVYLTTCQGNP--KTNFDHSSS-----ILEGEYVASCSDDGKVVIGSLFTDDEI 106 (846)
T ss_pred eeeeccccceEEEEecCCcc--ccccccccc-----ccCCceEEEecCCCcEEEeeccCCccc
Confidence 34445578888887754332 222223222 347899999999999988877665433
No 340
>KOG2444|consensus
Probab=91.76 E-value=1.2 Score=25.52 Aligned_cols=72 Identities=14% Similarity=0.138 Sum_probs=37.8
Q ss_pred cceEEEeeeCCCeEEEEeCCCCceeE-EeeccccceEEEEec--CCCEEEEecCCCcEEEEeCCCCceeeEecCcc
Q psy14456 19 SSLLISGGAGDCKIYVTDCATGQAFQ-ALSGHSGHVLSLYNW--GGATVLSGSHDRTVRFWDLRTRGCTNVLTPIT 91 (93)
Q Consensus 19 ~~~~~~~g~~~~~v~~~~~~~~~~~~-~~~~~~~~v~~~~~~--~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~~ 91 (93)
+..++.++ .+|.|.+|..+-..... ....-.+.+.+++.. ++.+.++++.++.++.|++..+..+-....|+
T Consensus 70 ~~~~~vG~-~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~ 144 (238)
T KOG2444|consen 70 SAKLMVGT-SDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHN 144 (238)
T ss_pred CceEEeec-ccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeecccc
Confidence 34455544 59999998866211111 111122233333222 34466677777777777777666555444443
No 341
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=91.63 E-value=2.7 Score=27.80 Aligned_cols=57 Identities=12% Similarity=0.159 Sum_probs=40.7
Q ss_pred eEEEeeeCCCeEEEEeCCCCceeEEee-ccccceEEE-Ee--cCCCEEEEecCCCcEEEEe
Q psy14456 21 LLISGGAGDCKIYVTDCATGQAFQALS-GHSGHVLSL-YN--WGGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 21 ~~~~~g~~~~~v~~~~~~~~~~~~~~~-~~~~~v~~~-~~--~~~~~~~s~~~~~~i~~~d 77 (93)
+++...+....+.|||.+.+.....-. ...+.|.++ |. ++++.+++.+..+.|.++.
T Consensus 42 k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~ 102 (631)
T PF12234_consen 42 KIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYT 102 (631)
T ss_pred cEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEE
Confidence 344444447788999998887543222 456788888 64 4889999999999988874
No 342
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=91.55 E-value=3.4 Score=28.69 Aligned_cols=68 Identities=9% Similarity=0.103 Sum_probs=45.4
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEE----eCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEe
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVT----DCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d 77 (93)
+.|..+.|.++ ...++.+- .+|.|.+. +...... ...-.-...|.++ |+||..+++....++++.+.+
T Consensus 76 ~~ivs~~yl~d----~~~l~~~~-~~Gdi~~~~~~~~~~~~~~-E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt 148 (928)
T PF04762_consen 76 DKIVSFQYLAD----SESLCIAL-ASGDIILVREDPDPDEDEI-EIVGSVDSGILAASWSPDEELLALVTGEGNLLLMT 148 (928)
T ss_pred CcEEEEEeccC----CCcEEEEE-CCceEEEEEccCCCCCcee-EEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEe
Confidence 46778888887 44444443 58888887 4333322 2222345688999 999999998888788777653
No 343
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=91.43 E-value=1.9 Score=26.08 Aligned_cols=53 Identities=17% Similarity=0.161 Sum_probs=36.3
Q ss_pred CCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCce
Q psy14456 29 DCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGC 83 (93)
Q Consensus 29 ~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~ 83 (93)
.+...++|++++........ ...+... |+|+++.++-.. ++.|.+++..++..
T Consensus 22 ~~~y~i~d~~~~~~~~l~~~-~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~ 75 (353)
T PF00930_consen 22 KGDYYIYDIETGEITPLTPP-PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQE 75 (353)
T ss_dssp EEEEEEEETTTTEEEESS-E-ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEE
T ss_pred ceeEEEEecCCCceEECcCC-ccccccceeecCCCeeEEEe-cCceEEEECCCCCe
Confidence 45678889988765443322 4556667 999999888764 57888888877643
No 344
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=91.04 E-value=2.3 Score=25.88 Aligned_cols=72 Identities=17% Similarity=0.178 Sum_probs=47.0
Q ss_pred eEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC-Ccee--EEeeccccc----------eEEE-EecCCCEEEEec-CCC
Q psy14456 7 RDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT-GQAF--QALSGHSGH----------VLSL-YNWGGATVLSGS-HDR 71 (93)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~--~~~~~~~~~----------v~~~-~~~~~~~~~s~~-~~~ 71 (93)
+-++++++ +++++++.-..+.|.++-++. |... .....|.+. +... +.|+++++++.+ ..-
T Consensus 92 ~yvsvd~~----g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~D 167 (346)
T COG2706 92 CYVSVDED----GRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTD 167 (346)
T ss_pred eEEEECCC----CCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCc
Confidence 55666666 667776665578899988754 3321 112223333 6666 899999888876 346
Q ss_pred cEEEEeCCCCc
Q psy14456 72 TVRFWDLRTRG 82 (93)
Q Consensus 72 ~i~~~d~~~~~ 82 (93)
.+.+|++..|.
T Consensus 168 ri~~y~~~dg~ 178 (346)
T COG2706 168 RIFLYDLDDGK 178 (346)
T ss_pred eEEEEEcccCc
Confidence 78889888654
No 345
>KOG2114|consensus
Probab=90.69 E-value=1.6 Score=29.69 Aligned_cols=60 Identities=18% Similarity=0.328 Sum_probs=35.2
Q ss_pred ceEEEeeeCCCeEEEEeCCCCceeEEeeccccc-eEEEEec-CCCEEEEecCCC-----cEEEEeCCCC
Q psy14456 20 SLLISGGAGDCKIYVTDCATGQAFQALSGHSGH-VLSLYNW-GGATVLSGSHDR-----TVRFWDLRTR 81 (93)
Q Consensus 20 ~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~-v~~~~~~-~~~~~~s~~~~~-----~i~~~d~~~~ 81 (93)
..++. |+.+|.|.+++ +.-+.+..++++... +..++.. +...+++.+.|. .+++|++++-
T Consensus 36 ~~vvi-gt~~G~V~~Ln-~s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~ 102 (933)
T KOG2114|consen 36 GSVVI-GTADGRVVILN-SSFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKV 102 (933)
T ss_pred ceEEE-eeccccEEEec-ccceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEeccccc
Confidence 33343 44588887765 223344667776666 4444443 335677766553 5899998853
No 346
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=90.50 E-value=1 Score=25.50 Aligned_cols=28 Identities=14% Similarity=0.355 Sum_probs=22.8
Q ss_pred EecCCCEEEEecCCCcEEEEeCCCCcee
Q psy14456 57 YNWGGATVLSGSHDRTVRFWDLRTRGCT 84 (93)
Q Consensus 57 ~~~~~~~~~s~~~~~~i~~~d~~~~~~~ 84 (93)
+...+.++.....+|.+.+||+.+++..
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~ 45 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAV 45 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeec
Confidence 3556788888889999999999987653
No 347
>KOG3621|consensus
Probab=89.70 E-value=2 Score=28.57 Aligned_cols=63 Identities=17% Similarity=0.196 Sum_probs=41.0
Q ss_pred cceEEEeeeCCCeEEEEeCCCCceeE-EeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCc
Q psy14456 19 SSLLISGGAGDCKIYVTDCATGQAFQ-ALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRG 82 (93)
Q Consensus 19 ~~~~~~~g~~~~~v~~~~~~~~~~~~-~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~ 82 (93)
.++++.+. ..|.+.+|+-..+..+. ...+..+.+... .++...+++.++..+.|.++.+..+.
T Consensus 45 ~~~l~~Gs-S~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~ 109 (726)
T KOG3621|consen 45 EEYLAMGS-SAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKEL 109 (726)
T ss_pred CceEEEec-ccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccC
Confidence 45555554 59999999876665433 222333333344 67777788888888888888777643
No 348
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=89.65 E-value=2.3 Score=26.68 Aligned_cols=45 Identities=11% Similarity=-0.025 Sum_probs=33.9
Q ss_pred eeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEecCc
Q psy14456 46 LSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLTPI 90 (93)
Q Consensus 46 ~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~ 90 (93)
+....-.+..+ .+|.+++.+....-|.|.++|+.++..++++.+-
T Consensus 303 l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGY 348 (415)
T PF14655_consen 303 LPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGY 348 (415)
T ss_pred eccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccC
Confidence 33334456677 8999888887777799999999999888777653
No 349
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=89.19 E-value=3.8 Score=25.50 Aligned_cols=73 Identities=23% Similarity=0.224 Sum_probs=33.5
Q ss_pred EEEecCCCCcceEEEeeeCCCeEEEE--eCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeE
Q psy14456 10 CFIEDTSNKSSLLISGGAGDCKIYVT--DCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNV 86 (93)
Q Consensus 10 ~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~ 86 (93)
+|.++ +++++-.+..++.-.+| |+.+++..+.-.+-....... .+++...++-...+..+.-.|+++.+....
T Consensus 42 ~ft~d----G~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~v 117 (386)
T PF14583_consen 42 CFTDD----GRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVV 117 (386)
T ss_dssp -B-TT----S-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEE
T ss_pred CcCCC----CCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEEEE
Confidence 45555 44444444456665544 566666544322221211223 577777766555567888889888765433
No 350
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=88.94 E-value=0.89 Score=17.95 Aligned_cols=30 Identities=20% Similarity=0.240 Sum_probs=20.4
Q ss_pred CCCEEE-EecCCCcEEEEeCCCCceeeEecC
Q psy14456 60 GGATVL-SGSHDRTVRFWDLRTRGCTNVLTP 89 (93)
Q Consensus 60 ~~~~~~-s~~~~~~i~~~d~~~~~~~~~~~~ 89 (93)
+++.+. +...++.+.++|..++..+..+..
T Consensus 2 d~~~lyv~~~~~~~v~~id~~~~~~~~~i~v 32 (42)
T TIGR02276 2 DGTKLYVTNSGSNTVSVIDTATNKVIATIPV 32 (42)
T ss_pred CCCEEEEEeCCCCEEEEEECCCCeEEEEEEC
Confidence 445444 444678889999988877766654
No 351
>KOG2395|consensus
Probab=88.92 E-value=3 Score=27.16 Aligned_cols=57 Identities=18% Similarity=0.205 Sum_probs=38.4
Q ss_pred ceEEEeeeCCCeEEEEeCCCCce-eEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 20 SLLISGGAGDCKIYVTDCATGQA-FQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 20 ~~~~~~g~~~~~v~~~~~~~~~~-~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
..++.+ +.+|.|++||- .+.. ...+.+-..+|..+ ...+|.+++.-+ +..+.+.+..
T Consensus 442 G~Ivvg-S~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~tyLlLi~t~ 500 (644)
T KOG2395|consen 442 GYIVVG-SLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILATC-KTYLLLIDTL 500 (644)
T ss_pred ceEEEe-ecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEec-ccEEEEEEEe
Confidence 345554 47999999996 5544 34556777888888 888888776433 5566666543
No 352
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=88.61 E-value=6.5 Score=27.44 Aligned_cols=59 Identities=14% Similarity=0.086 Sum_probs=36.9
Q ss_pred ceeEEEEEecCCCCcceEEEeee--C---CCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEec
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGA--G---DCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGS 68 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~--~---~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~ 68 (93)
.-..++|..| +.+++.+.- . ...+++|+-+ |........-.+--..+ |.|.|+++++..
T Consensus 211 ~~~~ISWRGD----G~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q 275 (928)
T PF04762_consen 211 GRVRISWRGD----GEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQ 275 (928)
T ss_pred CceEEEECCC----CcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEE
Confidence 3456789888 788776653 2 2578899844 54333333222223456 899999998664
No 353
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=88.52 E-value=3.2 Score=27.94 Aligned_cols=34 Identities=15% Similarity=0.194 Sum_probs=26.1
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT 39 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 39 (93)
..|..+.|+|.+.++..+++-. + |+.+|+||+..
T Consensus 147 ~~i~qv~WhP~s~~~~~l~vLt-s-dn~lR~y~~~~ 180 (717)
T PF10168_consen 147 LEIKQVRWHPWSESDSHLVVLT-S-DNTLRLYDISD 180 (717)
T ss_pred ceEEEEEEcCCCCCCCeEEEEe-c-CCEEEEEecCC
Confidence 4688999999865555665554 3 99999999864
No 354
>KOG4499|consensus
Probab=87.93 E-value=3.8 Score=24.00 Aligned_cols=78 Identities=14% Similarity=0.108 Sum_probs=48.7
Q ss_pred eEEEEEecCCCCcceEEEeeeCCCeEEEEe--CCCCc-----eeEEeec---cccceE-EE-EecCCCEEEEecCCCcEE
Q psy14456 7 RDVCFIEDTSNKSSLLISGGAGDCKIYVTD--CATGQ-----AFQALSG---HSGHVL-SL-YNWGGATVLSGSHDRTVR 74 (93)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~-----~~~~~~~---~~~~v~-~~-~~~~~~~~~s~~~~~~i~ 74 (93)
+.++|+-+ .+.+.-..+.+..|..|| ..+|. .+..+.. ...... .+ ..-+|.+.++.-..+++.
T Consensus 161 Ngl~Wd~d----~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~ 236 (310)
T KOG4499|consen 161 NGLAWDSD----AKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQ 236 (310)
T ss_pred cccccccc----CcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEE
Confidence 34667655 566666666688887787 55553 2222221 111111 22 344677778887888999
Q ss_pred EEeCCCCceeeEec
Q psy14456 75 FWDLRTRGCTNVLT 88 (93)
Q Consensus 75 ~~d~~~~~~~~~~~ 88 (93)
..|..+|+.++.+.
T Consensus 237 ~~dp~tGK~L~eik 250 (310)
T KOG4499|consen 237 KVDPTTGKILLEIK 250 (310)
T ss_pred EECCCCCcEEEEEE
Confidence 99999998887764
No 355
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=87.37 E-value=5 Score=25.27 Aligned_cols=73 Identities=14% Similarity=0.120 Sum_probs=41.2
Q ss_pred EEEEEecCCCCcceEEEeeeCCCeEEEEeCC--CCce-eEEeeccccceEEE-EecCCCEEEEecC-CCc--EEEEeCCC
Q psy14456 8 DVCFIEDTSNKSSLLISGGAGDCKIYVTDCA--TGQA-FQALSGHSGHVLSL-YNWGGATVLSGSH-DRT--VRFWDLRT 80 (93)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~--~~~~-~~~~~~~~~~v~~~-~~~~~~~~~s~~~-~~~--i~~~d~~~ 80 (93)
.-.|+|+ ++.++-..++.|.-.+|-.+ .... ..+....... .- ++|++.+++..+. ++. +.+.|+.+
T Consensus 286 ~Ps~spd----G~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~~~~~~~--~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~ 359 (425)
T COG0823 286 SPSWSPD----GSKIVFTSDRGGRPQIYLYDLEGSQVTRLTFSGGGNS--NPVWSPDGDKIVFESSSGGQWDIDKNDLAS 359 (425)
T ss_pred CccCCCC----CCEEEEEeCCCCCcceEEECCCCCceeEeeccCCCCc--CccCCCCCCEEEEEeccCCceeeEEeccCC
Confidence 3467888 56655555578887777554 3332 2222222222 34 8999998875553 343 66677766
Q ss_pred CceeeE
Q psy14456 81 RGCTNV 86 (93)
Q Consensus 81 ~~~~~~ 86 (93)
+...+.
T Consensus 360 ~~~~~~ 365 (425)
T COG0823 360 GGKIRI 365 (425)
T ss_pred CCcEEE
Confidence 553333
No 356
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=86.98 E-value=4 Score=23.18 Aligned_cols=64 Identities=16% Similarity=0.134 Sum_probs=40.8
Q ss_pred cceEEEeeeCCCeEEEEeCCCCceeEEe-------e-------ccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCce
Q psy14456 19 SSLLISGGAGDCKIYVTDCATGQAFQAL-------S-------GHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGC 83 (93)
Q Consensus 19 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~-------~-------~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~ 83 (93)
++++++.. .+|.+.+||+..++++..- . .....|..+ ...+|..+++-+ ++....|+..-+..
T Consensus 22 ~~~Ll~iT-~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L~~W 99 (219)
T PF07569_consen 22 GSYLLAIT-SSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDLGCW 99 (219)
T ss_pred CCEEEEEe-CCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecccccee
Confidence 56666665 5999999999887553211 1 233456666 777787777654 46667776654433
Q ss_pred e
Q psy14456 84 T 84 (93)
Q Consensus 84 ~ 84 (93)
+
T Consensus 100 ~ 100 (219)
T PF07569_consen 100 I 100 (219)
T ss_pred E
Confidence 3
No 357
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=86.97 E-value=5.3 Score=24.60 Aligned_cols=71 Identities=18% Similarity=0.111 Sum_probs=41.7
Q ss_pred eeEEEEEecCCCCcceEEEee----eCCCeEEEEeCCCCceeEE-eeccccceEEE-EecCCCEEEEecCC---------
Q psy14456 6 VRDVCFIEDTSNKSSLLISGG----AGDCKIYVTDCATGQAFQA-LSGHSGHVLSL-YNWGGATVLSGSHD--------- 70 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g----~~~~~v~~~~~~~~~~~~~-~~~~~~~v~~~-~~~~~~~~~s~~~~--------- 70 (93)
+....++|+ +++++-+- ++...++++|+++++.+.. +..... ..+ |.+++..++....+
T Consensus 126 ~~~~~~Spd----g~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~~--~~~~W~~d~~~~~y~~~~~~~~~~~~~ 199 (414)
T PF02897_consen 126 LGGFSVSPD----GKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPKF--SSVSWSDDGKGFFYTRFDEDQRTSDSG 199 (414)
T ss_dssp EEEEEETTT----SSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEES--EEEEECTTSSEEEEEECSTTTSS-CCG
T ss_pred eeeeeECCC----CCEEEEEecCCCCceEEEEEEECCCCcCcCCccccccc--ceEEEeCCCCEEEEEEeCcccccccCC
Confidence 345677888 66665433 3334599999999976543 222111 237 89887776544322
Q ss_pred --CcEEEEeCCCCc
Q psy14456 71 --RTVRFWDLRTRG 82 (93)
Q Consensus 71 --~~i~~~d~~~~~ 82 (93)
..+..|.+.+..
T Consensus 200 ~~~~v~~~~~gt~~ 213 (414)
T PF02897_consen 200 YPRQVYRHKLGTPQ 213 (414)
T ss_dssp CCEEEEEEETTS-G
T ss_pred CCcEEEEEECCCCh
Confidence 236777777654
No 358
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=86.14 E-value=1.2 Score=16.54 Aligned_cols=25 Identities=32% Similarity=0.235 Sum_probs=19.4
Q ss_pred EEEEecCCCcEEEEeCCCCceeeEe
Q psy14456 63 TVLSGSHDRTVRFWDLRTRGCTNVL 87 (93)
Q Consensus 63 ~~~s~~~~~~i~~~d~~~~~~~~~~ 87 (93)
.++.++.++.+..+|.++|+..-.+
T Consensus 8 ~v~~~~~~g~l~a~d~~~G~~~W~~ 32 (33)
T smart00564 8 TVYVGSTDGTLYALDAKTGEILWTY 32 (33)
T ss_pred EEEEEcCCCEEEEEEcccCcEEEEc
Confidence 5667778899999999888776543
No 359
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=85.74 E-value=3.6 Score=24.91 Aligned_cols=60 Identities=18% Similarity=0.175 Sum_probs=36.5
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeE-Eeec------------c----ccceEEE-EecCCCEEE
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQ-ALSG------------H----SGHVLSL-YNWGGATVL 65 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~-~~~~------------~----~~~v~~~-~~~~~~~~~ 65 (93)
..+....|+|+ ++.++-. +++.|.+++..++...+ +..+ . -+.-..+ |+|+++.++
T Consensus 43 ~~~~~~~~sP~----g~~~~~v--~~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la 116 (353)
T PF00930_consen 43 PKLQDAKWSPD----GKYIAFV--RDNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLA 116 (353)
T ss_dssp TTBSEEEE-SS----STEEEEE--ETTEEEEESSTTSEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEE
T ss_pred cccccceeecC----CCeeEEE--ecCceEEEECCCCCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEE
Confidence 35677899999 6777665 48899999877664332 1112 0 1122467 999999888
Q ss_pred EecC
Q psy14456 66 SGSH 69 (93)
Q Consensus 66 s~~~ 69 (93)
....
T Consensus 117 ~~~~ 120 (353)
T PF00930_consen 117 FLRF 120 (353)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6653
No 360
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=85.30 E-value=6.6 Score=24.11 Aligned_cols=59 Identities=8% Similarity=0.071 Sum_probs=32.8
Q ss_pred CCCeEEEEeCCCCceeEEeeccccce-EEEEecCCCEEEEecCCCcEEEEeCCCCceeeEe
Q psy14456 28 GDCKIYVTDCATGQAFQALSGHSGHV-LSLYNWGGATVLSGSHDRTVRFWDLRTRGCTNVL 87 (93)
Q Consensus 28 ~~~~v~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~ 87 (93)
.++.+..+|..+++.+-....-.... ....- .+..++.++.++.+.+.|..+|+.+...
T Consensus 302 ~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v-~~g~l~v~~~~G~l~~ld~~tG~~~~~~ 361 (394)
T PRK11138 302 QNDRVYALDTRGGVELWSQSDLLHRLLTAPVL-YNGYLVVGDSEGYLHWINREDGRFVAQQ 361 (394)
T ss_pred CCCeEEEEECCCCcEEEcccccCCCcccCCEE-ECCEEEEEeCCCEEEEEECCCCCEEEEE
Confidence 36666666666665433221100111 11101 2455667788899999999998876554
No 361
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=85.01 E-value=6.4 Score=23.73 Aligned_cols=72 Identities=17% Similarity=0.270 Sum_probs=43.2
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEee--ccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALS--GHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~--~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
+.|.++.|+|+ .+.+++..+ ....-++-...|..+.++. +-.+ .-.+ +..++++.++--.++.+.++.+..
T Consensus 86 ~nvS~LTynp~----~rtLFav~n-~p~~iVElt~~GdlirtiPL~g~~D-pE~Ieyig~n~fvi~dER~~~l~~~~vd~ 159 (316)
T COG3204 86 ANVSSLTYNPD----TRTLFAVTN-KPAAIVELTKEGDLIRTIPLTGFSD-PETIEYIGGNQFVIVDERDRALYLFTVDA 159 (316)
T ss_pred ccccceeeCCC----cceEEEecC-CCceEEEEecCCceEEEecccccCC-hhHeEEecCCEEEEEehhcceEEEEEEcC
Confidence 34889999999 677777775 5555566556677766553 2111 1233 444555555555566666665554
Q ss_pred C
Q psy14456 81 R 81 (93)
Q Consensus 81 ~ 81 (93)
.
T Consensus 160 ~ 160 (316)
T COG3204 160 D 160 (316)
T ss_pred C
Confidence 4
No 362
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=83.89 E-value=6.9 Score=23.25 Aligned_cols=55 Identities=16% Similarity=0.229 Sum_probs=36.8
Q ss_pred CCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEec------CCCcEEEEeCCCCc
Q psy14456 28 GDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGS------HDRTVRFWDLRTRG 82 (93)
Q Consensus 28 ~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~------~~~~i~~~d~~~~~ 82 (93)
....+++||....+-..--.+-.+.|..+ |..+.++++.|. ....+..||..+..
T Consensus 14 ~C~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~ 75 (281)
T PF12768_consen 14 PCPGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQT 75 (281)
T ss_pred CCCEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCe
Confidence 47789999987665433333456788888 876667777664 34567778876553
No 363
>PRK02888 nitrous-oxide reductase; Validated
Probab=83.87 E-value=10 Score=25.30 Aligned_cols=53 Identities=17% Similarity=0.155 Sum_probs=35.8
Q ss_pred CCeEEEEeCCC----C-ceeEEeeccccceEEE-EecCCCEEEEe-cCCCcEEEEeCCCCc
Q psy14456 29 DCKIYVTDCAT----G-QAFQALSGHSGHVLSL-YNWGGATVLSG-SHDRTVRFWDLRTRG 82 (93)
Q Consensus 29 ~~~v~~~~~~~----~-~~~~~~~~~~~~v~~~-~~~~~~~~~s~-~~~~~i~~~d~~~~~ 82 (93)
++.|.+.|..+ + ..+..+. -......+ ++|++.+++.. ..+..+.+.|+.+..
T Consensus 295 gn~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k 354 (635)
T PRK02888 295 GSKVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLD 354 (635)
T ss_pred CCEEEEEECCccccCCcceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhh
Confidence 46788888877 3 3334333 22333566 89999987655 478999999998754
No 364
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=83.31 E-value=7.7 Score=23.34 Aligned_cols=77 Identities=13% Similarity=0.134 Sum_probs=44.9
Q ss_pred eEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC--C----ce-eEEeeccccceEEE-EecCCCEEEEecCC-CcEEEEe
Q psy14456 7 RDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT--G----QA-FQALSGHSGHVLSL-YNWGGATVLSGSHD-RTVRFWD 77 (93)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~--~----~~-~~~~~~~~~~v~~~-~~~~~~~~~s~~~~-~~i~~~d 77 (93)
+.++|+|+ ++.++.+-+..+.+.-++... + +. ...+....+..=.+ ...++.+.+++-.+ +.+..|+
T Consensus 166 NGla~SpD----g~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~ 241 (307)
T COG3386 166 NGLAFSPD----GKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFN 241 (307)
T ss_pred CceEECCC----CCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEEC
Confidence 57899999 666666666678888777652 1 11 11111112222233 56677777544444 3888898
Q ss_pred CCCCceeeEec
Q psy14456 78 LRTRGCTNVLT 88 (93)
Q Consensus 78 ~~~~~~~~~~~ 88 (93)
.. +..+..+.
T Consensus 242 pd-G~l~~~i~ 251 (307)
T COG3386 242 PD-GKLLGEIK 251 (307)
T ss_pred CC-CcEEEEEE
Confidence 87 66665554
No 365
>KOG1008|consensus
Probab=83.16 E-value=0.56 Score=30.84 Aligned_cols=74 Identities=16% Similarity=0.277 Sum_probs=47.1
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC--ceeEEeeccccceEEE-Eec-CCCEEEEec----CCCcEEEE
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG--QAFQALSGHSGHVLSL-YNW-GGATVLSGS----HDRTVRFW 76 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~~~~~~~~~~~v~~~-~~~-~~~~~~s~~----~~~~i~~~ 76 (93)
.+.|+++.-+. .+-+++.|..+|.|.+-..+.. +......++....+++ |++ |.+.++.|- .|..+.+|
T Consensus 58 y~kcva~~y~~---d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iw 134 (783)
T KOG1008|consen 58 YVKCVASFYGN---DRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIW 134 (783)
T ss_pred CceeehhhcCC---chhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccce
Confidence 45566665442 2356666766899988776533 2223334566777888 877 556666552 35689999
Q ss_pred eCCCC
Q psy14456 77 DLRTR 81 (93)
Q Consensus 77 d~~~~ 81 (93)
|+.++
T Consensus 135 di~s~ 139 (783)
T KOG1008|consen 135 DINSL 139 (783)
T ss_pred ecccc
Confidence 99876
No 366
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=82.34 E-value=10 Score=24.18 Aligned_cols=66 Identities=15% Similarity=0.144 Sum_probs=41.5
Q ss_pred EEEeeeCCCeEEEEeCCCCceeEEeecccc------ceEEE-EecCC-CEEEEecCCCcEEEEeCCCCceeeEec
Q psy14456 22 LISGGAGDCKIYVTDCATGQAFQALSGHSG------HVLSL-YNWGG-ATVLSGSHDRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 22 ~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~------~v~~~-~~~~~-~~~~s~~~~~~i~~~d~~~~~~~~~~~ 88 (93)
++... .++.+...|.++++.+-....... .+... ....+ ..++.++.++.+..+|.++|+.+-.+.
T Consensus 64 vy~~~-~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~~~~~V~v~~~~g~v~AlD~~TG~~~W~~~ 137 (488)
T cd00216 64 MYFTT-SHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYWDPRKVFFGTFDGRLVALDAETGKQVWKFG 137 (488)
T ss_pred EEEeC-CCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEccCCeEEEecCCCeEEEEECCCCCEeeeec
Confidence 34433 478999999998877655432211 11111 11123 567777789999999999998776554
No 367
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=82.34 E-value=2.3 Score=16.69 Aligned_cols=26 Identities=19% Similarity=0.134 Sum_probs=20.8
Q ss_pred EEEecCCCcEEEEeCCCCceeeEecC
Q psy14456 64 VLSGSHDRTVRFWDLRTRGCTNVLTP 89 (93)
Q Consensus 64 ~~s~~~~~~i~~~d~~~~~~~~~~~~ 89 (93)
+..+..++.+...|.++|+.+-.+..
T Consensus 3 v~~~~~~g~l~AlD~~TG~~~W~~~~ 28 (38)
T PF01011_consen 3 VYVGTPDGYLYALDAKTGKVLWKFQT 28 (38)
T ss_dssp EEEETTTSEEEEEETTTTSEEEEEES
T ss_pred EEEeCCCCEEEEEECCCCCEEEeeeC
Confidence 45558899999999999988777654
No 368
>KOG1008|consensus
Probab=82.02 E-value=1 Score=29.76 Aligned_cols=71 Identities=15% Similarity=0.193 Sum_probs=41.1
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeC-C-CCceeEEeecccc----ceEEE-Eec-CCCEEEEec-CCCcEE
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDC-A-TGQAFQALSGHSG----HVLSL-YNW-GGATVLSGS-HDRTVR 74 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~-~~~~~~~~~~~~~----~v~~~-~~~-~~~~~~s~~-~~~~i~ 74 (93)
..+..+...|-. ..+ +++.+ |+.+.+||. . ....+..+...++ .+..+ |.| ...++++.. ..++|+
T Consensus 196 k~vqG~tVdp~~---~nY-~cs~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIr 270 (783)
T KOG1008|consen 196 KYVQGITVDPFS---PNY-FCSNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIR 270 (783)
T ss_pred hhcccceecCCC---CCc-eeccc-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEE
Confidence 445566666642 334 44454 999999993 2 2233343433333 36777 888 334455554 446888
Q ss_pred EEeCC
Q psy14456 75 FWDLR 79 (93)
Q Consensus 75 ~~d~~ 79 (93)
++|+.
T Consensus 271 lydi~ 275 (783)
T KOG1008|consen 271 LYDIC 275 (783)
T ss_pred Eeccc
Confidence 88876
No 369
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=81.95 E-value=9.5 Score=23.43 Aligned_cols=56 Identities=18% Similarity=0.111 Sum_probs=35.0
Q ss_pred eEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeC
Q psy14456 21 LLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 21 ~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~ 78 (93)
.++... .+|.+...|..+++.+....-....+..- .- .+..++.++.|+.+..++.
T Consensus 337 ~l~v~~-~~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~-~~~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 337 YLVVGD-SEGYLHWINREDGRFVAQQKVDSSGFLSEPVV-ADDKLLIQARDGTVYAITR 393 (394)
T ss_pred EEEEEe-CCCEEEEEECCCCCEEEEEEcCCCcceeCCEE-ECCEEEEEeCCceEEEEeC
Confidence 444444 58999999999998776654322223322 22 2346777788888877654
No 370
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=81.43 E-value=8.4 Score=22.45 Aligned_cols=70 Identities=17% Similarity=0.281 Sum_probs=43.3
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeecc-ccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGH-SGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~-~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
.+..++|.|+ ...+++..+..+.|..++. .|+.+..+.-. .+-.-.+ +..++.++++.-.++.+.++++.
T Consensus 23 e~SGLTy~pd----~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~ 94 (248)
T PF06977_consen 23 ELSGLTYNPD----TGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTID 94 (248)
T ss_dssp -EEEEEEETT----TTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE-
T ss_pred CccccEEcCC----CCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEe
Confidence 4899999998 5666666667888888886 46666655321 2334455 55556566555567888888773
No 371
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=80.80 E-value=3.2 Score=27.34 Aligned_cols=32 Identities=25% Similarity=0.548 Sum_probs=25.1
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCC
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCA 38 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 38 (93)
++.|.|-+|.++| .+++++.|+ .-.-.+||-.
T Consensus 155 ~G~IhCACWT~DG---~RLVVAvGS-sLHSyiWd~~ 186 (671)
T PF15390_consen 155 SGLIHCACWTKDG---QRLVVAVGS-SLHSYIWDSA 186 (671)
T ss_pred CceEEEEEecCcC---CEEEEEeCC-eEEEEEecCc
Confidence 4679999999996 667778885 7777899854
No 372
>KOG1920|consensus
Probab=80.24 E-value=14 Score=26.74 Aligned_cols=71 Identities=14% Similarity=0.205 Sum_probs=43.8
Q ss_pred eEEEEEecCCCCcceEEEeee--CCCeEEEEeCCC---CceeEEeeccccceEEE-EecCCCEEEE---ecCCCcEEEEe
Q psy14456 7 RDVCFIEDTSNKSSLLISGGA--GDCKIYVTDCAT---GQAFQALSGHSGHVLSL-YNWGGATVLS---GSHDRTVRFWD 77 (93)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~g~--~~~~v~~~~~~~---~~~~~~~~~~~~~v~~~-~~~~~~~~~s---~~~~~~i~~~d 77 (93)
.+++|-|. +.++++... .+..|.++.-+- ++-...+.....++..+ |+.++..++. ......+.+|-
T Consensus 245 ~~LsWkPs----gs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt 320 (1265)
T KOG1920|consen 245 HSLSWKPS----GSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWT 320 (1265)
T ss_pred cceeecCC----CCeEeeeeecCCCCcEEEEecCCccccccccCCcccccchheeeecCCCCceeeeecccccceEEEEE
Confidence 47889997 778877662 255677766431 22222233333347788 9998888776 44455699997
Q ss_pred CCCC
Q psy14456 78 LRTR 81 (93)
Q Consensus 78 ~~~~ 81 (93)
..+.
T Consensus 321 ~~Ny 324 (1265)
T KOG1920|consen 321 TGNY 324 (1265)
T ss_pred ecCe
Confidence 6654
No 373
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=80.20 E-value=10 Score=22.60 Aligned_cols=68 Identities=19% Similarity=0.258 Sum_probs=39.9
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCc-eeEEee-ccccceEEEEecCCCEEEEecCCCcEEEEeCC
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQ-AFQALS-GHSGHVLSLYNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~-~~~~~~-~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
.++|++++--. +. ++++. +..+.+|++...+ ...... .....+.++ ...++.++.+..-..+.++.++
T Consensus 88 ~g~V~ai~~~~-----~~-lv~~~--g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl-~~~~~~I~vgD~~~sv~~~~~~ 157 (321)
T PF03178_consen 88 KGPVTAICSFN-----GR-LVVAV--GNKLYVYDLDNSKTLLKKAFYDSPFYITSL-SVFKNYILVGDAMKSVSLLRYD 157 (321)
T ss_dssp SS-EEEEEEET-----TE-EEEEE--TTEEEEEEEETTSSEEEEEEE-BSSSEEEE-EEETTEEEEEESSSSEEEEEEE
T ss_pred cCcceEhhhhC-----CE-EEEee--cCEEEEEEccCcccchhhheecceEEEEEE-eccccEEEEEEcccCEEEEEEE
Confidence 46778877652 33 44432 6899999987776 433222 222345555 3346688888877777766444
No 374
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=78.93 E-value=3.2 Score=16.15 Aligned_cols=28 Identities=7% Similarity=0.067 Sum_probs=16.6
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCC--CeEEEE
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGD--CKIYVT 35 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~--~~v~~~ 35 (93)
+.-....|+|+ ++.++-+..++ |.-.||
T Consensus 9 ~~~~~p~~SpD----Gk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 9 GDDGSPAWSPD----GKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSEEEEEE-TT----SSEEEEEEECT--SSEEEE
T ss_pred ccccCEEEecC----CCEEEEEecCCCCCCcCEE
Confidence 34567789999 56655544456 555554
No 375
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=78.15 E-value=13 Score=22.85 Aligned_cols=40 Identities=28% Similarity=0.439 Sum_probs=25.5
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEee
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALS 47 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~ 47 (93)
.+.++..+.+. ..++++....++.+.+||..+++.+..+.
T Consensus 290 ~~~Si~Vsqd~---~P~L~~~~~~~~~l~v~D~~tGk~~~~~~ 329 (342)
T PF06433_consen 290 PIDSIAVSQDD---KPLLYALSAGDGTLDVYDAATGKLVRSIE 329 (342)
T ss_dssp EESEEEEESSS---S-EEEEEETTTTEEEEEETTT--EEEEE-
T ss_pred ccceEEEccCC---CcEEEEEcCCCCeEEEEeCcCCcEEeehh
Confidence 45677777763 33454433247999999999998887775
No 376
>KOG4499|consensus
Probab=77.59 E-value=12 Score=22.07 Aligned_cols=40 Identities=13% Similarity=0.133 Sum_probs=32.6
Q ss_pred cceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-Eec
Q psy14456 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNW 59 (93)
Q Consensus 19 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~ 59 (93)
+.+++++-+ .++|...|..+|+.+..+.-.+..+++. |--
T Consensus 223 G~L~Va~~n-g~~V~~~dp~tGK~L~eiklPt~qitsccFgG 263 (310)
T KOG4499|consen 223 GNLYVATFN-GGTVQKVDPTTGKILLEIKLPTPQITSCCFGG 263 (310)
T ss_pred CcEEEEEec-CcEEEEECCCCCcEEEEEEcCCCceEEEEecC
Confidence 677888875 8999999999999998887667777777 643
No 377
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=77.26 E-value=15 Score=23.00 Aligned_cols=37 Identities=22% Similarity=0.175 Sum_probs=26.6
Q ss_pred cccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeE
Q psy14456 49 HSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNV 86 (93)
Q Consensus 49 ~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~ 86 (93)
..+++.++ .+ +--.++.|..+|.+.+.|+|....+..
T Consensus 85 ~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~ 122 (395)
T PF08596_consen 85 KQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYN 122 (395)
T ss_dssp -S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred cCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEee
Confidence 45777777 53 556788888999999999987665544
No 378
>KOG2377|consensus
Probab=76.25 E-value=19 Score=23.51 Aligned_cols=34 Identities=15% Similarity=0.313 Sum_probs=29.1
Q ss_pred eccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 47 SGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 47 ~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
...+++|.++ |++|.+.++....+..+-+++...
T Consensus 63 m~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~ 97 (657)
T KOG2377|consen 63 MDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIP 97 (657)
T ss_pred ecCCCceeEEEeccCcceEEEEecCceEEEEecCC
Confidence 3467799999 999999999999999999888743
No 379
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=76.18 E-value=15 Score=22.36 Aligned_cols=55 Identities=24% Similarity=0.212 Sum_probs=35.4
Q ss_pred EEEecCCCCcceEEEeee----CCCeEEEEeCCCC-ceeEEeeccccceEEE-EecCCCEEEEec
Q psy14456 10 CFIEDTSNKSSLLISGGA----GDCKIYVTDCATG-QAFQALSGHSGHVLSL-YNWGGATVLSGS 68 (93)
Q Consensus 10 ~~~~~~~~~~~~~~~~g~----~~~~v~~~~~~~~-~~~~~~~~~~~~v~~~-~~~~~~~~~s~~ 68 (93)
.|+|+ +.++.++-+ ..|.|-+||.+.+ +.+..+..|.-....+ +.+|+.+++.+.
T Consensus 120 vfs~d----G~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvan 180 (366)
T COG3490 120 VFSPD----GRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVAN 180 (366)
T ss_pred ccCCC----CcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeC
Confidence 35666 566665431 2577889998754 3345666665555666 788888887654
No 380
>KOG1920|consensus
Probab=75.50 E-value=29 Score=25.31 Aligned_cols=66 Identities=12% Similarity=0.049 Sum_probs=43.5
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEE
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFW 76 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~ 76 (93)
.|.++.|..+ ..-++.+. ..|.+.+-|..+..... .-.-.+.|.++ |+|++.+++-...++++.+-
T Consensus 70 ~i~s~~fl~d----~~~i~v~~-~~G~iilvd~et~~~ei-vg~vd~GI~aaswS~Dee~l~liT~~~tll~m 136 (1265)
T KOG1920|consen 70 EIVSVQFLAD----TNSICVIT-ALGDIILVDPETLELEI-VGNVDNGISAASWSPDEELLALITGRQTLLFM 136 (1265)
T ss_pred ceEEEEEecc----cceEEEEe-cCCcEEEEcccccceee-eeeccCceEEEeecCCCcEEEEEeCCcEEEEE
Confidence 5677777766 33333333 47888887776654322 22245678888 99999999888777766554
No 381
>KOG4649|consensus
Probab=75.42 E-value=15 Score=22.05 Aligned_cols=68 Identities=16% Similarity=0.131 Sum_probs=43.6
Q ss_pred cceEEEeeeCCCeEEEEeCCCCceeEE-eeccccceEEEEecCCCEEEEecCCCcEEEEeCCCCceeeEec
Q psy14456 19 SSLLISGGAGDCKIYVTDCATGQAFQA-LSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 19 ~~~~~~~g~~~~~v~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~ 88 (93)
.+.++..|+..+.+..-|..+|...-. +.+-+-+...+. -+..++.|+..+.+.+.+..+|.....|.
T Consensus 22 skT~v~igSHs~~~~avd~~sG~~~We~ilg~RiE~sa~v--vgdfVV~GCy~g~lYfl~~~tGs~~w~f~ 90 (354)
T KOG4649|consen 22 SKTLVVIGSHSGIVIAVDPQSGNLIWEAILGVRIECSAIV--VGDFVVLGCYSGGLYFLCVKTGSQIWNFV 90 (354)
T ss_pred CceEEEEecCCceEEEecCCCCcEEeehhhCceeeeeeEE--ECCEEEEEEccCcEEEEEecchhheeeee
Confidence 455566677788888888888876532 222211111221 36678888899999999999986555543
No 382
>KOG3617|consensus
Probab=73.82 E-value=6.6 Score=27.45 Aligned_cols=32 Identities=9% Similarity=0.204 Sum_probs=27.0
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCA 38 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 38 (93)
|+.++..+.|+++ +..+++.. .-|.+.+|..+
T Consensus 100 h~a~i~~l~wS~~----G~~l~t~d-~~g~v~lwr~d 131 (1416)
T KOG3617|consen 100 HPAPIQGLDWSHD----GTVLMTLD-NPGSVHLWRYD 131 (1416)
T ss_pred CCCCceeEEecCC----CCeEEEcC-CCceeEEEEee
Confidence 7889999999999 67777765 59999999764
No 383
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=73.65 E-value=18 Score=22.00 Aligned_cols=42 Identities=17% Similarity=0.150 Sum_probs=31.1
Q ss_pred eccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEec
Q psy14456 47 SGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 47 ~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~ 88 (93)
.+-++.+..+ |+|+.+.+++......-.++--..|+.++.+.
T Consensus 82 ~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiP 124 (316)
T COG3204 82 LGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIP 124 (316)
T ss_pred ccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEec
Confidence 4445568889 99988888877777777777666787777764
No 384
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=73.57 E-value=19 Score=22.29 Aligned_cols=73 Identities=19% Similarity=0.196 Sum_probs=48.9
Q ss_pred eEEEEEecCCCCcceEEEeee--CCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEe-cCCCcEEEEeCCCCc
Q psy14456 7 RDVCFIEDTSNKSSLLISGGA--GDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSG-SHDRTVRFWDLRTRG 82 (93)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~g~--~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~-~~~~~i~~~d~~~~~ 82 (93)
..+++.|+ +..+..+.. .++.+.+.|..+.........-..+ ..+ +.|++..+... ..++.+.+.|.....
T Consensus 119 ~~~~~~~~----~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~ 193 (381)
T COG3391 119 VGLAVDPD----GKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNS 193 (381)
T ss_pred ceEEECCC----CCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcc
Confidence 35677777 555555554 3688888888888877664432234 666 89988865544 478899999966554
Q ss_pred ee
Q psy14456 83 CT 84 (93)
Q Consensus 83 ~~ 84 (93)
..
T Consensus 194 v~ 195 (381)
T COG3391 194 VV 195 (381)
T ss_pred ee
Confidence 43
No 385
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=73.11 E-value=27 Score=23.92 Aligned_cols=73 Identities=16% Similarity=0.185 Sum_probs=46.3
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC---------Cce--eE-Ee--------eccccceEEE-EecC---
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT---------GQA--FQ-AL--------SGHSGHVLSL-YNWG--- 60 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~---------~~~--~~-~~--------~~~~~~v~~~-~~~~--- 60 (93)
.|..+..+|+ +..++..|. .+..-+.-.+. +.. .+ .+ ......+..+ |+|.
T Consensus 86 ~v~~i~~n~~----g~~lal~G~-~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~ 160 (717)
T PF10168_consen 86 EVHQISLNPT----GSLLALVGP-RGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSES 160 (717)
T ss_pred eEEEEEECCC----CCEEEEEcC-CcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCC
Confidence 4777888888 788888884 44444333221 111 11 11 1223467777 9985
Q ss_pred CCEEEEecCCCcEEEEeCCCCc
Q psy14456 61 GATVLSGSHDRTVRFWDLRTRG 82 (93)
Q Consensus 61 ~~~~~s~~~~~~i~~~d~~~~~ 82 (93)
+..++.-..|+.+++||+....
T Consensus 161 ~~~l~vLtsdn~lR~y~~~~~~ 182 (717)
T PF10168_consen 161 DSHLVVLTSDNTLRLYDISDPQ 182 (717)
T ss_pred CCeEEEEecCCEEEEEecCCCC
Confidence 5778888889999999998643
No 386
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=73.07 E-value=13 Score=20.18 Aligned_cols=34 Identities=9% Similarity=0.030 Sum_probs=23.9
Q ss_pred cceeEEEEEecCCC--CcceEEEeeeCCCeEEEEeCC
Q psy14456 4 GTVRDVCFIEDTSN--KSSLLISGGAGDCKIYVTDCA 38 (93)
Q Consensus 4 ~~v~~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 38 (93)
..|..++|+|.|.+ .+..|++.. .++.|.+|...
T Consensus 86 ~~vv~~aWSP~Gl~~~~rClLavLT-s~~~l~l~~~~ 121 (173)
T PF12657_consen 86 SQVVSAAWSPSGLGPNGRCLLAVLT-SNGRLSLYGPP 121 (173)
T ss_pred ccEEEEEECCCCCCCCCceEEEEEc-CCCeEEEEecC
Confidence 46889999997643 334455544 59999999865
No 387
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=73.01 E-value=27 Score=23.92 Aligned_cols=70 Identities=11% Similarity=0.108 Sum_probs=41.3
Q ss_pred cceeEEEEE--ecCCCCcceEEEeeeCCCeEEEEeCCCC--cee-EEeeccccceEEE-EecC---CC---EEEEecCCC
Q psy14456 4 GTVRDVCFI--EDTSNKSSLLISGGAGDCKIYVTDCATG--QAF-QALSGHSGHVLSL-YNWG---GA---TVLSGSHDR 71 (93)
Q Consensus 4 ~~v~~~~~~--~~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~~-~~~~~~~~~v~~~-~~~~---~~---~~~s~~~~~ 71 (93)
+.+..++++ .. .++++++. ....|.++-.... +.. ..-..+...|.++ |-++ +. ++++++-.|
T Consensus 164 ~SaWGLdIh~~~~----~rlIAVSs-Ns~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G 238 (717)
T PF08728_consen 164 ASAWGLDIHDYKK----SRLIAVSS-NSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISG 238 (717)
T ss_pred CceeEEEEEecCc----ceEEEEec-CCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccC
Confidence 456777777 43 45555554 4777777654332 111 1111255667777 6553 22 677788889
Q ss_pred cEEEEeC
Q psy14456 72 TVRFWDL 78 (93)
Q Consensus 72 ~i~~~d~ 78 (93)
.+.+|++
T Consensus 239 ~v~~~~I 245 (717)
T PF08728_consen 239 EVWTFKI 245 (717)
T ss_pred cEEEEEE
Confidence 9988877
No 388
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=72.90 E-value=26 Score=23.56 Aligned_cols=34 Identities=9% Similarity=0.099 Sum_probs=25.0
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCA 38 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 38 (93)
+.|..++|.|.+..+...+++.- ....|.+|.+.
T Consensus 57 EhV~GlsW~P~~~~~~paLLAVQ-HkkhVtVWqL~ 90 (671)
T PF15390_consen 57 EHVHGLSWAPPCTADTPALLAVQ-HKKHVTVWQLC 90 (671)
T ss_pred ceeeeeeecCcccCCCCceEEEe-ccceEEEEEec
Confidence 46889999998665555566665 58889999763
No 389
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=71.84 E-value=24 Score=22.68 Aligned_cols=60 Identities=17% Similarity=0.043 Sum_probs=39.0
Q ss_pred CCeEEEEeCCCCceeEEeecc--c------cceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEec
Q psy14456 29 DCKIYVTDCATGQAFQALSGH--S------GHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 29 ~~~v~~~~~~~~~~~~~~~~~--~------~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~ 88 (93)
++.+...|..+++.+-..... . .....- ....+..++.++.|+.+..+|..+|+.+-.+.
T Consensus 365 ~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~ald~~tG~~lW~~~ 433 (488)
T cd00216 365 KGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFRAFDATTGKELWKFR 433 (488)
T ss_pred ceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEecCCeEEEECCCCeEEEEECCCCceeeEEE
Confidence 567888888888776544321 0 111111 12245678888899999999999998776654
No 390
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=71.05 E-value=6 Score=15.55 Aligned_cols=21 Identities=29% Similarity=0.368 Sum_probs=14.9
Q ss_pred CCCEEEEecCCCcEEEEeCCC
Q psy14456 60 GGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 60 ~~~~~~s~~~~~~i~~~d~~~ 80 (93)
.+..++.++.|+.+..+|.++
T Consensus 20 ~~g~vyv~~~dg~l~ald~~t 40 (40)
T PF13570_consen 20 AGGRVYVGTGDGNLYALDAAT 40 (40)
T ss_dssp CTSEEEEE-TTSEEEEEETT-
T ss_pred ECCEEEEEcCCCEEEEEeCCC
Confidence 456777778899999988763
No 391
>KOG1897|consensus
Probab=69.58 E-value=39 Score=24.24 Aligned_cols=51 Identities=12% Similarity=0.247 Sum_probs=37.9
Q ss_pred CCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 29 DCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 29 ~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
+..|++|+..+++.+..-..+..++..+ ..-.+..++.|..=+.+.+..++
T Consensus 847 n~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~ 898 (1096)
T KOG1897|consen 847 NQSVRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQYK 898 (1096)
T ss_pred CcEEEEEEccccceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEEEe
Confidence 6799999988886666556677777777 66678888888766766665544
No 392
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=69.47 E-value=30 Score=23.05 Aligned_cols=59 Identities=17% Similarity=0.191 Sum_probs=36.8
Q ss_pred cceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 19 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
+.++++++ +.|-|++||--.......+.+-...|..+ ...+|.++++-+ ...+.+-|++
T Consensus 573 sGyIa~as-~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTC-k~yllL~d~~ 632 (776)
T COG5167 573 SGYIAAAS-RKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATC-KNYLLLTDVP 632 (776)
T ss_pred CceEEEec-CCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEee-cceEEEEecc
Confidence 34566655 79999999943333333445556677777 777777655333 4566666655
No 393
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=69.38 E-value=19 Score=20.66 Aligned_cols=47 Identities=26% Similarity=0.388 Sum_probs=31.8
Q ss_pred ceEEEeeeCCCeEEEEeCCCC--ceeEEeeccccceEEE-EecCCCEEEEec
Q psy14456 20 SLLISGGAGDCKIYVTDCATG--QAFQALSGHSGHVLSL-YNWGGATVLSGS 68 (93)
Q Consensus 20 ~~~~~~g~~~~~v~~~~~~~~--~~~~~~~~~~~~v~~~-~~~~~~~~~s~~ 68 (93)
+.++.+. ..+.|.+|++... ..+..+. --+.+..+ ++..|.+++|-=
T Consensus 29 d~Lfva~-~g~~Vev~~l~~~~~~~~~~F~-Tv~~V~~l~y~~~GDYlvTlE 78 (215)
T PF14761_consen 29 DALFVAA-SGCKVEVYDLEQEECPLLCTFS-TVGRVLQLVYSEAGDYLVTLE 78 (215)
T ss_pred ceEEEEc-CCCEEEEEEcccCCCceeEEEc-chhheeEEEeccccceEEEEE
Confidence 4443333 3788999998833 3355554 45788888 888899998763
No 394
>KOG4460|consensus
Probab=68.28 E-value=33 Score=22.91 Aligned_cols=75 Identities=12% Similarity=0.062 Sum_probs=45.4
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCC---------CCcee--E-------Eeecccc--ceEEE-EecCC--
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCA---------TGQAF--Q-------ALSGHSG--HVLSL-YNWGG-- 61 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~---------~~~~~--~-------~~~~~~~--~v~~~-~~~~~-- 61 (93)
.|..+..++. ++.++-+|. +|.+-++-.+ .++.. + .+..... .+.-. |+|+.
T Consensus 105 eV~~vl~s~~----GS~VaL~G~-~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~ 179 (741)
T KOG4460|consen 105 EVYQVLLSPT----GSHVALIGI-KGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSIL 179 (741)
T ss_pred EEEEEEecCC----CceEEEecC-CeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccC
Confidence 4666777777 788888886 8887776422 23211 1 0111111 33344 88853
Q ss_pred -CEEEEecCCCcEEEEeCCCCcee
Q psy14456 62 -ATVLSGSHDRTVRFWDLRTRGCT 84 (93)
Q Consensus 62 -~~~~s~~~~~~i~~~d~~~~~~~ 84 (93)
..+..-..|..+++||+.....+
T Consensus 180 D~hL~iL~sdnviRiy~lS~~tel 203 (741)
T KOG4460|consen 180 DPHLVLLTSDNVIRIYSLSEPTEL 203 (741)
T ss_pred CceEEEEecCcEEEEEecCCcchh
Confidence 55666678999999998865544
No 395
>PHA02713 hypothetical protein; Provisional
Probab=67.82 E-value=32 Score=22.63 Aligned_cols=59 Identities=5% Similarity=0.001 Sum_probs=33.1
Q ss_pred eEEEEeCCC-Cce--eEEeeccccceEEEEecCCCEEEEecCCC--cEEEEeCCCCceeeEecCc
Q psy14456 31 KIYVTDCAT-GQA--FQALSGHSGHVLSLYNWGGATVLSGSHDR--TVRFWDLRTRGCTNVLTPI 90 (93)
Q Consensus 31 ~v~~~~~~~-~~~--~~~~~~~~~~v~~~~~~~~~~~~s~~~~~--~i~~~d~~~~~~~~~~~~~ 90 (93)
.+..||.++ .+- +..+......... ...++...+.|+.++ .+-.||..+.+.......|
T Consensus 481 ~ve~Ydp~~~~~W~~~~~m~~~r~~~~~-~~~~~~iyv~Gg~~~~~~~e~yd~~~~~W~~~~~~~ 544 (557)
T PHA02713 481 CIFRYNTNTYNGWELITTTESRLSALHT-ILHDNTIMMLHCYESYMLQDTFNVYTYEWNHICHQH 544 (557)
T ss_pred eEEEecCCCCCCeeEccccCccccccee-EEECCEEEEEeeecceeehhhcCcccccccchhhhc
Confidence 356788776 332 2233222222111 233677778888777 6778888887765544444
No 396
>KOG2114|consensus
Probab=67.78 E-value=40 Score=23.73 Aligned_cols=79 Identities=13% Similarity=0.198 Sum_probs=46.7
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCce-eEEeeccccceEEE-EecCCC-EEEEecCCCcEEEEeCC
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQA-FQALSGHSGHVLSL-YNWGGA-TVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~~~~~~~~v~~~-~~~~~~-~~~s~~~~~~i~~~d~~ 79 (93)
.++|+.+++..++ ...++++. -..|.+|.+....+ .+.+..+...+.|. +++... .++++ +..+.+||..
T Consensus 171 ~~pITgL~~~~d~---~s~lFv~T--t~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~--~e~l~fY~sd 243 (933)
T KOG2114|consen 171 KEPITGLALRSDG---KSVLFVAT--TEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAG--SEFLYFYDSD 243 (933)
T ss_pred CCCceeeEEecCC---ceeEEEEe--cceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEec--CceEEEEcCC
Confidence 3689999998773 22233332 56788887763332 44566666778887 776444 44433 4567777766
Q ss_pred CCceeeEec
Q psy14456 80 TRGCTNVLT 88 (93)
Q Consensus 80 ~~~~~~~~~ 88 (93)
....-..|.
T Consensus 244 ~~~~cfaf~ 252 (933)
T KOG2114|consen 244 GRGPCFAFE 252 (933)
T ss_pred Ccceeeeec
Confidence 444444443
No 397
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=65.93 E-value=42 Score=23.27 Aligned_cols=61 Identities=13% Similarity=0.144 Sum_probs=39.0
Q ss_pred CCeEEEEeCCCCceeEEeec--cc-------cceEEE-Eec-CCC---EEEEecCCCcEEEEeCCCCceeeEecC
Q psy14456 29 DCKIYVTDCATGQAFQALSG--HS-------GHVLSL-YNW-GGA---TVLSGSHDRTVRFWDLRTRGCTNVLTP 89 (93)
Q Consensus 29 ~~~v~~~~~~~~~~~~~~~~--~~-------~~v~~~-~~~-~~~---~~~s~~~~~~i~~~d~~~~~~~~~~~~ 89 (93)
.+.|...|.++++..-.++. |. +...-+ +.. ++. .++.+.+++.+.++|.++|+.+..+..
T Consensus 413 ~~slvALD~~TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~~e 487 (764)
T TIGR03074 413 SSSLVALDATTGKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPVEE 487 (764)
T ss_pred cceEEEEeCCCCceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeecee
Confidence 34566668888887655543 21 111111 222 442 677888999999999999988776544
No 398
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=64.94 E-value=26 Score=20.52 Aligned_cols=58 Identities=14% Similarity=0.208 Sum_probs=30.1
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEe--ec-cc------cceEEE-EecCCCEEEEe
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQAL--SG-HS------GHVLSL-YNWGGATVLSG 67 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~--~~-~~------~~v~~~-~~~~~~~~~s~ 67 (93)
.+..+.++|.. +++++.+. ++..+..+| ..|+.+..+ .. .. ...-.+ |.++|.+.++.
T Consensus 172 d~S~l~~~p~t---~~lliLS~-es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvs 239 (248)
T PF06977_consen 172 DLSGLSYDPRT---GHLLILSD-ESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVS 239 (248)
T ss_dssp ---EEEEETTT---TEEEEEET-TTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEE
T ss_pred cccceEEcCCC---CeEEEEEC-CCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEc
Confidence 46788898874 66777765 689998888 556654433 22 11 123466 77777655544
No 399
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=64.26 E-value=15 Score=17.67 Aligned_cols=27 Identities=15% Similarity=0.096 Sum_probs=13.8
Q ss_pred eEEEEEecCCCCcceEEEeeeCCCeEEEEeC
Q psy14456 7 RDVCFIEDTSNKSSLLISGGAGDCKIYVTDC 37 (93)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 37 (93)
+.+.++|+ ++.+..+....+.|.+|..
T Consensus 57 NGI~~s~~----~k~lyVa~~~~~~I~vy~~ 83 (86)
T PF01731_consen 57 NGIAISPD----KKYLYVASSLAHSIHVYKR 83 (86)
T ss_pred ceEEEcCC----CCEEEEEeccCCeEEEEEe
Confidence 34555555 4444444434666666654
No 400
>KOG2467|consensus
Probab=63.99 E-value=9.4 Score=23.98 Aligned_cols=22 Identities=27% Similarity=0.537 Sum_probs=19.3
Q ss_pred CCCEEEEecCCCcEEEEeCCCC
Q psy14456 60 GGATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 60 ~~~~~~s~~~~~~i~~~d~~~~ 81 (93)
.+..+++++.|..+.+||++..
T Consensus 340 ~Gy~lvtgGTDnHlvLvDLr~~ 361 (477)
T KOG2467|consen 340 RGYKLVTGGTDNHLVLVDLRPK 361 (477)
T ss_pred cCceEecCCccceEEEEecccc
Confidence 4678999999999999999863
No 401
>KOG3630|consensus
Probab=63.95 E-value=7.9 Score=27.83 Aligned_cols=69 Identities=7% Similarity=-0.046 Sum_probs=40.3
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeC
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~ 78 (93)
..++.|.|.- ....+. ...|+.|++..+........-..-....+++ |++.|..++.|...+++..|..
T Consensus 158 ~~~~~wnP~v---p~n~av-~l~dlsl~V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P 227 (1405)
T KOG3630|consen 158 QLKNVWNPLV---PLNSAV-DLSDLSLRVKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEP 227 (1405)
T ss_pred cccccccCCc---cchhhh-hccccchhhhhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEeec
Confidence 3455665541 112233 3357777776543222111111244566788 9999999999988888877754
No 402
>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.
Probab=63.74 E-value=8.1 Score=14.30 Aligned_cols=25 Identities=4% Similarity=0.011 Sum_probs=15.3
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEE
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVT 35 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 35 (93)
..|.+++..+ .+++.+- ..+.+|+|
T Consensus 2 E~i~aia~g~------~~vavaT-S~~~lRif 26 (27)
T PF12341_consen 2 EEIEAIAAGD------SWVAVAT-SAGYLRIF 26 (27)
T ss_pred ceEEEEEccC------CEEEEEe-CCCeEEec
Confidence 3567776643 3455544 47888886
No 403
>PRK13616 lipoprotein LpqB; Provisional
Probab=60.49 E-value=48 Score=22.17 Aligned_cols=25 Identities=16% Similarity=0.149 Sum_probs=17.3
Q ss_pred ccceEEE-EecCCCEEEEecCCCcEEE
Q psy14456 50 SGHVLSL-YNWGGATVLSGSHDRTVRF 75 (93)
Q Consensus 50 ~~~v~~~-~~~~~~~~~s~~~~~~i~~ 75 (93)
...+..+ |+++|..++... ++.+.+
T Consensus 447 ~g~Issl~wSpDG~RiA~i~-~g~v~V 472 (591)
T PRK13616 447 PGPISELQLSRDGVRAAMII-GGKVYL 472 (591)
T ss_pred CCCcCeEEECCCCCEEEEEE-CCEEEE
Confidence 4568888 999998776544 355555
No 404
>PRK10115 protease 2; Provisional
Probab=58.80 E-value=55 Score=22.29 Aligned_cols=70 Identities=13% Similarity=0.102 Sum_probs=39.4
Q ss_pred eeEEEEEecCCCCcceEEEee----eCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecC-C-----CcEE
Q psy14456 6 VRDVCFIEDTSNKSSLLISGG----AGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSH-D-----RTVR 74 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g----~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~-~-----~~i~ 74 (93)
+..+.|+|+ +++++-+- ++...+.+.|+.++..+........ ..+ |.+++..++-... + ..+.
T Consensus 129 l~~~~~Spd----g~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~ 202 (686)
T PRK10115 129 LGGMAITPD----NTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE--PSFVWANDSWTFYYVRKHPVTLLPYQVW 202 (686)
T ss_pred EeEEEECCC----CCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc--eEEEEeeCCCEEEEEEecCCCCCCCEEE
Confidence 566778887 56655433 3334477888877753322111111 346 8888775543322 1 3566
Q ss_pred EEeCCCC
Q psy14456 75 FWDLRTR 81 (93)
Q Consensus 75 ~~d~~~~ 81 (93)
.+++.++
T Consensus 203 ~h~lgt~ 209 (686)
T PRK10115 203 RHTIGTP 209 (686)
T ss_pred EEECCCC
Confidence 6777776
No 405
>KOG1900|consensus
Probab=58.06 E-value=76 Score=23.63 Aligned_cols=33 Identities=12% Similarity=0.113 Sum_probs=26.4
Q ss_pred ccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 48 GHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 48 ~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
.+.++|..+ ....-+.+.+-+..+.+.+||+..
T Consensus 240 ~~~dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 240 SSKDPIRQITIDNSRNILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred CCCCcceeeEeccccceeeeeccCceEEEEEccC
Confidence 456677777 666667788888999999999987
No 406
>KOG1916|consensus
Probab=57.52 E-value=23 Score=25.20 Aligned_cols=69 Identities=12% Similarity=0.190 Sum_probs=39.6
Q ss_pred EEecCCCCcceEEEeeeCCCeEEEEeCCC-C----ceeEEeeccc-cceEEE-EecCC---------CEEEEe-cCCCcE
Q psy14456 11 FIEDTSNKSSLLISGGAGDCKIYVTDCAT-G----QAFQALSGHS-GHVLSL-YNWGG---------ATVLSG-SHDRTV 73 (93)
Q Consensus 11 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~----~~~~~~~~~~-~~v~~~-~~~~~---------~~~~s~-~~~~~i 73 (93)
.+|| +..++... .||.++.|.+.. + .|+..++.|. .+..|. ++-.. .++++. ..++.+
T Consensus 243 lSpD----Gtv~a~a~-~dG~v~f~Qiyi~g~~~~rclhewkphd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~ 317 (1283)
T KOG1916|consen 243 LSPD----GTVFAWAI-SDGSVGFYQIYITGKIVHRCLHEWKPHDKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREE 317 (1283)
T ss_pred eCCC----CcEEEEee-cCCccceeeeeeeccccHhhhhccCCCCCCCceeeeeccccccCCccceeEEEEecccCCcce
Confidence 5677 67777766 499998887531 2 3444555555 333343 33221 223333 456778
Q ss_pred EEEeCCCCcee
Q psy14456 74 RFWDLRTRGCT 84 (93)
Q Consensus 74 ~~~d~~~~~~~ 84 (93)
++|.-..-+|+
T Consensus 318 k~w~~a~w~Cl 328 (1283)
T KOG1916|consen 318 KFWAEAPWQCL 328 (1283)
T ss_pred eEeeccchhhh
Confidence 88987666665
No 407
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=55.73 E-value=37 Score=19.29 Aligned_cols=70 Identities=14% Similarity=0.105 Sum_probs=40.7
Q ss_pred eEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-Ee-cCCCEEEEecCCCcEEEEeCCCCcee
Q psy14456 7 RDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YN-WGGATVLSGSHDRTVRFWDLRTRGCT 84 (93)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~-~~~~~~~s~~~~~~i~~~d~~~~~~~ 84 (93)
.+..|.+.. +.++++ ....+.|..|+..++.... +.... ...+ +. +++.++++. .++ +.++|..+++..
T Consensus 3 Egp~~d~~~---g~l~~~-D~~~~~i~~~~~~~~~~~~-~~~~~--~~G~~~~~~~g~l~v~~-~~~-~~~~d~~~g~~~ 73 (246)
T PF08450_consen 3 EGPVWDPRD---GRLYWV-DIPGGRIYRVDPDTGEVEV-IDLPG--PNGMAFDRPDGRLYVAD-SGG-IAVVDPDTGKVT 73 (246)
T ss_dssp EEEEEETTT---TEEEEE-ETTTTEEEEEETTTTEEEE-EESSS--EEEEEEECTTSEEEEEE-TTC-EEEEETTTTEEE
T ss_pred cceEEECCC---CEEEEE-EcCCCEEEEEECCCCeEEE-EecCC--CceEEEEccCCEEEEEE-cCc-eEEEecCCCcEE
Confidence 356787742 455555 4468999999988776533 22111 4555 66 565555444 444 455588887543
Q ss_pred e
Q psy14456 85 N 85 (93)
Q Consensus 85 ~ 85 (93)
.
T Consensus 74 ~ 74 (246)
T PF08450_consen 74 V 74 (246)
T ss_dssp E
T ss_pred E
Confidence 3
No 408
>KOG2017|consensus
Probab=54.75 E-value=21 Score=22.36 Aligned_cols=31 Identities=19% Similarity=0.390 Sum_probs=23.5
Q ss_pred CEEEEec---CCCcEEEEeCCCCceeeEecCccC
Q psy14456 62 ATVLSGS---HDRTVRFWDLRTRGCTNVLTPITV 92 (93)
Q Consensus 62 ~~~~s~~---~~~~i~~~d~~~~~~~~~~~~~~~ 92 (93)
..+++++ .+|++.+|++..|.|-+.+.+.+.
T Consensus 182 kpLVSgSaLr~EGQLtvYny~~GPCYRClFP~Pp 215 (427)
T KOG2017|consen 182 KPLVSGSALRWEGQLTVYNYNNGPCYRCLFPNPP 215 (427)
T ss_pred CcccccccccccceeEEeecCCCceeeecCCCCc
Confidence 4455554 689999999999999888876544
No 409
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=53.78 E-value=46 Score=19.85 Aligned_cols=59 Identities=15% Similarity=0.130 Sum_probs=37.1
Q ss_pred CCCeEEEEeCCCCceeEEeeccccceEEEEecCCCEEEEecCCCcEEEEeCCCCceeeEec
Q psy14456 28 GDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 28 ~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~ 88 (93)
+++...+||.++-+.+..+.- ...=..+ ..++..++....+..+..+|..+-+..+.+.
T Consensus 108 k~~~~f~yd~~tl~~~~~~~y-~~EGWGL-t~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~ 166 (264)
T PF05096_consen 108 KEGTGFVYDPNTLKKIGTFPY-PGEGWGL-TSDGKRLIMSDGSSRLYFLDPETFKEVRTIQ 166 (264)
T ss_dssp SSSEEEEEETTTTEEEEEEE--SSS--EE-EECSSCEEEE-SSSEEEEE-TTT-SEEEEEE
T ss_pred cCCeEEEEccccceEEEEEec-CCcceEE-EcCCCEEEEECCccceEEECCcccceEEEEE
Confidence 578888889888877776642 2222233 3467777777778889999988766655543
No 410
>PF09081 DUF1921: Domain of unknown function (DUF1921); InterPro: IPR015165 This domain, which is found in a set of prokaryotic amylases, has no known function []. ; PDB: 1QI5_A 1JDC_A 2AMG_A 1QPK_A 1JDD_A 1QI4_A 1JDA_A 1GCY_A 1QI3_A.
Probab=47.57 E-value=25 Score=14.95 Aligned_cols=9 Identities=0% Similarity=0.091 Sum_probs=6.2
Q ss_pred CCCeEEEEe
Q psy14456 28 GDCKIYVTD 36 (93)
Q Consensus 28 ~~~~v~~~~ 36 (93)
.+|.|++|.
T Consensus 43 dnG~vRiWr 51 (51)
T PF09081_consen 43 DNGQVRIWR 51 (51)
T ss_dssp TTTTEEEEE
T ss_pred cCCcEEeeC
Confidence 367788773
No 411
>KOG3616|consensus
Probab=44.99 E-value=1.1e+02 Score=21.92 Aligned_cols=31 Identities=6% Similarity=-0.023 Sum_probs=21.5
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG 40 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 40 (93)
.++.+.-+|. +..++.+. +|+.+.+|+....
T Consensus 16 ~~~aiqshp~----~~s~v~~~-~d~si~lfn~~~r 46 (1636)
T KOG3616|consen 16 FTTAIQSHPG----GQSFVLAH-QDGSIILFNFIPR 46 (1636)
T ss_pred eeeeeeecCC----CceEEEEe-cCCcEEEEeeccc
Confidence 3556666676 56666654 7999999986544
No 412
>KOG2280|consensus
Probab=44.88 E-value=1e+02 Score=21.69 Aligned_cols=47 Identities=17% Similarity=0.297 Sum_probs=29.6
Q ss_pred eEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 31 KIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 31 ~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
.|++++. +|+.+..+......+..+ |+.+.. ++....+|.+.++++.
T Consensus 65 ~I~If~~-sG~lL~~~~w~~~~lI~mgWs~~ee-LI~v~k~g~v~Vy~~~ 112 (829)
T KOG2280|consen 65 YIRIFNI-SGQLLGRILWKHGELIGMGWSDDEE-LICVQKDGTVHVYGLL 112 (829)
T ss_pred eEEEEec-cccchHHHHhcCCCeeeecccCCce-EEEEeccceEEEeecc
Confidence 3555552 455555554444577778 876654 4556689999999865
No 413
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=44.69 E-value=1e+02 Score=21.12 Aligned_cols=72 Identities=13% Similarity=0.187 Sum_probs=46.7
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC---------CceeEEe--eccc-cceEEE-EecCCCEEEEecC
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT---------GQAFQAL--SGHS-GHVLSL-YNWGGATVLSGSH 69 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~---------~~~~~~~--~~~~-~~v~~~-~~~~~~~~~s~~~ 69 (93)
.+.|.+++|..... ++.+++.| -...|.+|.... ...+..+ ..++ .+|.+. |-.+|.+++..
T Consensus 72 ~~~I~dLDWtst~d--~qsiLaVG-f~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s-- 146 (631)
T PF12234_consen 72 DDPIRDLDWTSTPD--GQSILAVG-FPHHVLLYTQLRYDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS-- 146 (631)
T ss_pred CCceeeceeeecCC--CCEEEEEE-cCcEEEEEEccchhhhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEe--
Confidence 46789999965432 67888888 489999886421 1223322 3444 577777 88888777644
Q ss_pred CCcEEEEeCC
Q psy14456 70 DRTVRFWDLR 79 (93)
Q Consensus 70 ~~~i~~~d~~ 79 (93)
+..+.++|-.
T Consensus 147 GNqlfv~dk~ 156 (631)
T PF12234_consen 147 GNQLFVFDKW 156 (631)
T ss_pred CCEEEEECCC
Confidence 4577777643
No 414
>PRK13616 lipoprotein LpqB; Provisional
Probab=43.30 E-value=1e+02 Score=20.79 Aligned_cols=69 Identities=20% Similarity=0.346 Sum_probs=37.8
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEE---EeCCCCce-e---EEee-ccccceEEE-EecCCCEEEEecCCCcE
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYV---TDCATGQA-F---QALS-GHSGHVLSL-YNWGGATVLSGSHDRTV 73 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~---~~~~~~~~-~---~~~~-~~~~~v~~~-~~~~~~~~~s~~~~~~i 73 (93)
.+.|..+.|+|+ +..++... ++.|.+ -....+.. + ..+. +-...+..+ |..++.++ .+..+...
T Consensus 447 ~g~Issl~wSpD----G~RiA~i~--~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~ 519 (591)
T PRK13616 447 PGPISELQLSRD----GVRAAMII--GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVSLDWRTGDSLV-VGRSDPEH 519 (591)
T ss_pred CCCcCeEEECCC----CCEEEEEE--CCEEEEEEEEeCCCCceeecccEEeecccCCccccceEecCCEEE-EEecCCCC
Confidence 357999999999 66666653 567665 33333431 1 1122 222334667 88877755 33334444
Q ss_pred EEEeC
Q psy14456 74 RFWDL 78 (93)
Q Consensus 74 ~~~d~ 78 (93)
.+|.+
T Consensus 520 ~v~~v 524 (591)
T PRK13616 520 PVWYV 524 (591)
T ss_pred ceEEE
Confidence 45543
No 415
>KOG1897|consensus
Probab=42.42 E-value=1.3e+02 Score=21.91 Aligned_cols=60 Identities=17% Similarity=0.297 Sum_probs=33.3
Q ss_pred CCeEEEEeCCCCceeEEeec--cccceEEEEecCCCEEEEecCCCcEEEEeCCCCceeeEecCc
Q psy14456 29 DCKIYVTDCATGQAFQALSG--HSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRGCTNVLTPI 90 (93)
Q Consensus 29 ~~~v~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~ 90 (93)
.|.+.++....+..+..... -.+.+.++.--++.+++ +-...++++++.+++.++.-..+
T Consensus 806 ~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~fngkllA--~In~~vrLye~t~~~eLr~e~~~ 867 (1096)
T KOG1897|consen 806 NGRIIVFEFEELNSLELVAETVVKGAVYALVEFNGKLLA--GINQSVRLYEWTTERELRIECNI 867 (1096)
T ss_pred cceEEEEEEecCCceeeeeeeeeccceeehhhhCCeEEE--ecCcEEEEEEccccceehhhhcc
Confidence 45666666655333333321 23455555111456555 45678999998887666554443
No 416
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=42.24 E-value=1e+02 Score=20.38 Aligned_cols=68 Identities=15% Similarity=0.076 Sum_probs=39.8
Q ss_pred eEEEeeeCCCeEEEEeCCCCceeEEeec--ccc--ceEEE-EecCCCEEEEec-----CCCcEEEEeCCCCceeeEecC
Q psy14456 21 LLISGGAGDCKIYVTDCATGQAFQALSG--HSG--HVLSL-YNWGGATVLSGS-----HDRTVRFWDLRTRGCTNVLTP 89 (93)
Q Consensus 21 ~~~~~g~~~~~v~~~~~~~~~~~~~~~~--~~~--~v~~~-~~~~~~~~~s~~-----~~~~i~~~d~~~~~~~~~~~~ 89 (93)
.++.+. .++.+...|.++|+.+-.... +.. .+..- .-.++..++..+ .++.+..+|.++|+.+-.+..
T Consensus 122 ~v~v~t-~dg~l~ALDa~TGk~~W~~~~~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~ 199 (527)
T TIGR03075 122 KVFFGT-LDARLVALDAKTGKVVWSKKNGDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYT 199 (527)
T ss_pred EEEEEc-CCCEEEEEECCCCCEEeecccccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEeccC
Confidence 344444 488999999999988754431 110 11111 111343333222 268899999999988766654
No 417
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=41.97 E-value=93 Score=19.98 Aligned_cols=71 Identities=13% Similarity=0.010 Sum_probs=39.2
Q ss_pred EEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 8 DVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
.+++-|-+...++-+++.-+-||.+.+++.+.-.-...+.. .--.--+ |.+....+++++.+..+..|.+.
T Consensus 133 nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~-~llPgPl~Y~~~tDsfvt~sss~~l~~Yky~ 204 (418)
T PF14727_consen 133 NMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPD-FLLPGPLCYCPRTDSFVTASSSWTLECYKYQ 204 (418)
T ss_pred EEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCC-CCCCcCeEEeecCCEEEEecCceeEEEecHH
Confidence 34444443333233444444699999998764432222222 1111123 67777788888888787777653
No 418
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=40.89 E-value=82 Score=19.03 Aligned_cols=30 Identities=33% Similarity=0.472 Sum_probs=20.3
Q ss_pred cceEEEeeeCCCeEEEEeCCCCceeEEeecc
Q psy14456 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGH 49 (93)
Q Consensus 19 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~ 49 (93)
+++++++= .-..|.+.+..+++.+-.+.+.
T Consensus 155 G~yLiS~R-~~~~i~~I~~~tG~I~W~lgG~ 184 (299)
T PF14269_consen 155 GDYLISSR-NTSTIYKIDPSTGKIIWRLGGK 184 (299)
T ss_pred ccEEEEec-ccCEEEEEECCCCcEEEEeCCC
Confidence 57777664 3667777787888777666544
No 419
>KOG3616|consensus
Probab=40.88 E-value=54 Score=23.19 Aligned_cols=29 Identities=14% Similarity=0.355 Sum_probs=20.6
Q ss_pred eEEE-EecCCCEEEEecCCCcEEEEeCCCC
Q psy14456 53 VLSL-YNWGGATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 53 v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~ 81 (93)
+..+ -+|.++.++.+..|+.+++++....
T Consensus 17 ~~aiqshp~~~s~v~~~~d~si~lfn~~~r 46 (1636)
T KOG3616|consen 17 TTAIQSHPGGQSFVLAHQDGSIILFNFIPR 46 (1636)
T ss_pred eeeeeecCCCceEEEEecCCcEEEEeeccc
Confidence 3455 5677888888888888888776543
No 420
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=40.55 E-value=85 Score=19.12 Aligned_cols=67 Identities=12% Similarity=0.088 Sum_probs=31.9
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEe
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d 77 (93)
.+..+.-+++ +.+++.+ .+.....-|+.-...-...-......+..+ |.+++.+.... ..+.+..-+
T Consensus 146 s~~~~~r~~d----G~~vavs-~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~ 213 (302)
T PF14870_consen 146 SINDITRSSD----GRYVAVS-SRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSD 213 (302)
T ss_dssp -EEEEEE-TT----S-EEEEE-TTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE
T ss_pred eeEeEEECCC----CcEEEEE-CcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEcc
Confidence 4555555665 5655554 334444566542211111112245678899 99988776544 667777766
No 421
>KOG1916|consensus
Probab=40.40 E-value=18 Score=25.67 Aligned_cols=58 Identities=21% Similarity=0.263 Sum_probs=35.0
Q ss_pred eEEEeeeCCCeEEEEeCCCCceeEEeeccccce----------EEE--EecCCCEEEEecCCCcEEEEeCC
Q psy14456 21 LLISGGAGDCKIYVTDCATGQAFQALSGHSGHV----------LSL--YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 21 ~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v----------~~~--~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
..++.+..++.+++...++... ..+.+|...+ ..+ .+|||..++..+.||.+..|.+-
T Consensus 196 ~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiy 265 (1283)
T KOG1916|consen 196 VYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIY 265 (1283)
T ss_pred ceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeee
Confidence 4455666688888776553321 1222333222 222 57888888888888888877543
No 422
>KOG2109|consensus
Probab=39.37 E-value=61 Score=22.32 Aligned_cols=46 Identities=17% Similarity=0.347 Sum_probs=33.4
Q ss_pred EEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCC-CcEEEEe
Q psy14456 32 IYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHD-RTVRFWD 77 (93)
Q Consensus 32 v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~-~~i~~~d 77 (93)
+.+-|+.....+..++.|+.++..+ |.+.+.++++.+.. ..|.++-
T Consensus 297 vivkdf~S~a~i~QfkAhkspiSaLcfdqsgsllViasi~g~nVnvfR 344 (788)
T KOG2109|consen 297 VIVKDFDSFADIRQFKAHKSPISALCFDQSGSLLVIASITGRNVNVFR 344 (788)
T ss_pred EEeecccchhhhhheeeecCcccccccccCceEEEEEeeccceeeeEE
Confidence 4444566666677888999999988 99999988888744 3455543
No 423
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=39.26 E-value=1e+02 Score=19.57 Aligned_cols=38 Identities=5% Similarity=0.166 Sum_probs=26.2
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEe
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQAL 46 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~ 46 (93)
+++..++.||+ ++.++.-. .+|.+.+...+-.+.+..+
T Consensus 217 ~~i~~iavSpn----g~~iAl~t-~~g~l~v~ssDf~~~~~e~ 254 (410)
T PF04841_consen 217 GPIIKIAVSPN----GKFIALFT-DSGNLWVVSSDFSEKLCEF 254 (410)
T ss_pred CCeEEEEECCC----CCEEEEEE-CCCCEEEEECcccceeEEe
Confidence 57899999998 67666554 5888888776544444333
No 424
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=38.45 E-value=1e+02 Score=19.40 Aligned_cols=30 Identities=13% Similarity=0.359 Sum_probs=22.9
Q ss_pred ceEEE-EecCCCEEEEecCCCcEEEEeCCCC
Q psy14456 52 HVLSL-YNWGGATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 52 ~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~ 81 (93)
.+..+ ..+..+.+++...++.|.+|++..+
T Consensus 191 ~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~~ 221 (422)
T PF08801_consen 191 KIVQVAVDPSRRLLYTLTSDGSIQVWDLGPG 221 (422)
T ss_dssp -EEEEEEETTTTEEEEEESSE-EEEEEE-SS
T ss_pred ceeeEEecCCcCEEEEEeCCCcEEEEEEeCC
Confidence 37777 7777789999999999999999853
No 425
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=38.01 E-value=82 Score=18.18 Aligned_cols=59 Identities=20% Similarity=0.180 Sum_probs=33.6
Q ss_pred cceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCC
Q psy14456 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 19 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~ 81 (93)
++.++.+ ..+| +.+++........... +...|..+ ..++-+.++.-+ |+.+.++++..-
T Consensus 7 ~~~L~vG-t~~G-l~~~~~~~~~~~~~i~-~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l 66 (275)
T PF00780_consen 7 GDRLLVG-TEDG-LYVYDLSDPSKPTRIL-KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSL 66 (275)
T ss_pred CCEEEEE-ECCC-EEEEEecCCccceeEe-ecceEEEEEEecccCEEEEEc-CCccEEEEchhh
Confidence 4555554 4577 8888873222222222 22237777 666555555443 589999987753
No 426
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=35.80 E-value=1.5e+02 Score=20.65 Aligned_cols=74 Identities=12% Similarity=0.029 Sum_probs=43.1
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC-----ceeEEe---ecc-------ccceEEE-EecCCCEEEEec
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG-----QAFQAL---SGH-------SGHVLSL-YNWGGATVLSGS 68 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~-----~~~~~~---~~~-------~~~v~~~-~~~~~~~~~s~~ 68 (93)
+..+++|.|.. ...++... ..|.-.+|++... ..+... .++ .+.-..+ |..+...++.++
T Consensus 147 ~~aDv~FnP~~---~~q~AiVD-~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~ 222 (765)
T PF10214_consen 147 PHADVAFNPWD---QRQFAIVD-EKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCN 222 (765)
T ss_pred ccceEEeccCc---cceEEEEe-ccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEc
Confidence 56788998873 44566665 7999999999211 111111 111 1122355 766655565553
Q ss_pred CCCcEEEEeCCCCce
Q psy14456 69 HDRTVRFWDLRTRGC 83 (93)
Q Consensus 69 ~~~~i~~~d~~~~~~ 83 (93)
...+.++|+++...
T Consensus 223 -r~~l~~~d~~~~~~ 236 (765)
T PF10214_consen 223 -RSKLMLIDFESNWQ 236 (765)
T ss_pred -CCceEEEECCCCCc
Confidence 56778888876644
No 427
>PF08954 DUF1900: Domain of unknown function (DUF1900); InterPro: IPR015049 This domain is predominantly found in the structural protein coronin, and is duplicated in some sequences. It has no known function []. ; PDB: 2B4E_A 2AQ5_A.
Probab=35.12 E-value=74 Score=16.85 Aligned_cols=32 Identities=28% Similarity=0.335 Sum_probs=18.6
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCc
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQ 41 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 41 (93)
+.---|.++ .+.++.+|..|+.|+.|.+....
T Consensus 13 ~L~P~yD~d----t~llyl~gKGD~~ir~yEv~~~~ 44 (136)
T PF08954_consen 13 VLMPFYDED----TNLLYLAGKGDGNIRYYEVSDES 44 (136)
T ss_dssp -EEEEE-TT----T-EEEEEETT-S-EEEEEE-SST
T ss_pred eeEeeEcCC----CCEEEEEeccCcEEEEEEEcCCC
Confidence 334455666 67777778779999999987663
No 428
>KOG1983|consensus
Probab=35.07 E-value=1.8e+02 Score=21.24 Aligned_cols=26 Identities=23% Similarity=0.454 Sum_probs=22.1
Q ss_pred ecCCCEEEEecCCCcEEEEeCCCCce
Q psy14456 58 NWGGATVLSGSHDRTVRFWDLRTRGC 83 (93)
Q Consensus 58 ~~~~~~~~s~~~~~~i~~~d~~~~~~ 83 (93)
..++..++++-.|+.+..||...+..
T Consensus 243 ~~~~~~~v~~h~Dgs~~fWd~s~g~~ 268 (993)
T KOG1983|consen 243 SRDGSHFVSYHTDGSYAFWDVSSGKL 268 (993)
T ss_pred ccCCceEEEEEecCCEEeeecCCCce
Confidence 34588899999999999999998755
No 429
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=34.93 E-value=1.2e+02 Score=19.00 Aligned_cols=75 Identities=19% Similarity=0.213 Sum_probs=46.2
Q ss_pred EEEEEecCCCCcc-eEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecC---CCcEEEEeCCCCc
Q psy14456 8 DVCFIEDTSNKSS-LLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSH---DRTVRFWDLRTRG 82 (93)
Q Consensus 8 ~~~~~~~~~~~~~-~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~---~~~i~~~d~~~~~ 82 (93)
.++.++. +. .++... .+..+.+.|..+........--. ....+ +++++..+..... ++.+.+.|..+..
T Consensus 78 ~i~v~~~----~~~vyv~~~-~~~~v~vid~~~~~~~~~~~vG~-~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~ 151 (381)
T COG3391 78 GVAVNPA----GNKVYVTTG-DSNTVSVIDTATNTVLGSIPVGL-GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNK 151 (381)
T ss_pred ceeeCCC----CCeEEEecC-CCCeEEEEcCcccceeeEeeecc-CCceEEECCCCCEEEEEecccCCceEEEEeCCCCe
Confidence 3444555 34 344443 47889998877766655443222 33456 8887766654443 6888888888877
Q ss_pred eeeEec
Q psy14456 83 CTNVLT 88 (93)
Q Consensus 83 ~~~~~~ 88 (93)
......
T Consensus 152 ~~~~~~ 157 (381)
T COG3391 152 VTATIP 157 (381)
T ss_pred EEEEEe
Confidence 666543
No 430
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=34.77 E-value=1.1e+02 Score=18.86 Aligned_cols=15 Identities=7% Similarity=0.042 Sum_probs=10.5
Q ss_pred EEE-EecCCCEEEEec
Q psy14456 54 LSL-YNWGGATVLSGS 68 (93)
Q Consensus 54 ~~~-~~~~~~~~~s~~ 68 (93)
..+ |++++.++++-.
T Consensus 187 ~Gl~~d~~G~l~~tdn 202 (367)
T TIGR02604 187 YGHSVDSWGDVFFCDN 202 (367)
T ss_pred ccceECCCCCEEEEcc
Confidence 456 888888776644
No 431
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=34.65 E-value=1.7e+02 Score=20.80 Aligned_cols=62 Identities=16% Similarity=0.226 Sum_probs=43.0
Q ss_pred cceEEEeeeCCCeEEEEeCCCCceeEEeeccccc-eEEEEecC-------CCEEEEecCCCcEEEEeCCCC
Q psy14456 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGHSGH-VLSLYNWG-------GATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 19 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~-v~~~~~~~-------~~~~~s~~~~~~i~~~d~~~~ 81 (93)
.+.++........|.-.|++.|+.+..+..+... +..+ .|+ ....+.|-.+..+..||.|-.
T Consensus 493 ~~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~-~p~~K~aqlt~e~tflGls~n~lfriDpR~~ 562 (794)
T PF08553_consen 493 RNMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDI-APDSKFAQLTNEQTFLGLSDNSLFRIDPRLS 562 (794)
T ss_pred cceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEe-cccccccccCCCceEEEECCCceEEeccCCC
Confidence 4555655444677888899999999999876654 5444 332 334556677888899999864
No 432
>PF09984 DUF2222: Uncharacterized signal transduction histidine kinase domain (DUF2222); InterPro: IPR019247 This entry is found at the N terminus of various BarA-like signal transduction histidine kinases. These proteins are involved in the regulation of carbon metabolism via the csrA/csrB regulatory system. The role of this domain has not, as yet, been established. ; GO: 0004673 protein histidine kinase activity
Probab=34.60 E-value=77 Score=17.05 Aligned_cols=22 Identities=18% Similarity=0.232 Sum_probs=12.4
Q ss_pred ccceEEE--EecCCCEEEEecCCC
Q psy14456 50 SGHVLSL--YNWGGATVLSGSHDR 71 (93)
Q Consensus 50 ~~~v~~~--~~~~~~~~~s~~~~~ 71 (93)
..-|.++ |+.++++++|.....
T Consensus 50 S~~VrsIaiFD~~n~L~vTSn~h~ 73 (146)
T PF09984_consen 50 SPIVRSIAIFDANNQLFVTSNYHR 73 (146)
T ss_pred CCceEEEEEEcCCCcEEEECCCcC
Confidence 3445555 666666666655433
No 433
>KOG4305|consensus
Probab=32.90 E-value=1e+02 Score=22.45 Aligned_cols=28 Identities=32% Similarity=0.456 Sum_probs=22.4
Q ss_pred eEEEeeeCCCeEEEEeCCCCceeEEeeccc
Q psy14456 21 LLISGGAGDCKIYVTDCATGQAFQALSGHS 50 (93)
Q Consensus 21 ~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~ 50 (93)
++++-+ +..|.|||+++++.+....++.
T Consensus 964 yiia~~--~~fIeI~~~~t~eli~~i~~~~ 991 (1029)
T KOG4305|consen 964 YIIAFG--DNFIEIRDLETGELIQIILGQN 991 (1029)
T ss_pred eEEEec--CceEEEEecccceeeEEeeccc
Confidence 566654 8999999999999888776653
No 434
>KOG2727|consensus
Probab=32.51 E-value=90 Score=22.65 Aligned_cols=75 Identities=9% Similarity=0.103 Sum_probs=44.5
Q ss_pred EEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEEEe---------c-CCC----EEEEecCCCcE
Q psy14456 8 DVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYN---------W-GGA----TVLSGSHDRTV 73 (93)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~---------~-~~~----~~~s~~~~~~i 73 (93)
.++.+|+ +.+.+.+. +=+.|.+.|......+..++|+.+.-..... + +.+ +.+-+...|.+
T Consensus 326 ~lslSP~----gtlAAVTD-~lgRVlLlDta~~ivvr~wKGYRDAsc~fv~vkek~~~s~~~~sRvAlFLvIyAPRrgiL 400 (1244)
T KOG2727|consen 326 KLSLSPS----GTLAAVTD-SLGRVLLLDTAALIVVRLWKGYRDASCVFVEVKEKKGKSEPVKSRVALFLVIYAPRRGIL 400 (1244)
T ss_pred eeeeCCC----ccEEEEec-ccCcEEEEehhhhhHHHHhcccccceeEEEEcccccCCCccCcCceeEEEEEecccccHH
Confidence 4566776 56555554 4788888888777767777776654222111 1 001 12234556778
Q ss_pred EEEeCCCCceeeEe
Q psy14456 74 RFWDLRTRGCTNVL 87 (93)
Q Consensus 74 ~~~d~~~~~~~~~~ 87 (93)
-+|.+++|..+..|
T Consensus 401 EVW~~q~gpRV~Af 414 (1244)
T KOG2727|consen 401 EVWQMQTGPRVLAF 414 (1244)
T ss_pred HHHHhccCCeEEEE
Confidence 88888887655554
No 435
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=32.38 E-value=1.2e+02 Score=18.25 Aligned_cols=61 Identities=18% Similarity=0.103 Sum_probs=40.3
Q ss_pred CeEEEEeCCCCceeEEeec------cccceEEE-EecCC------CEEEEecCCCcEEEEeCCCCceeeEecCc
Q psy14456 30 CKIYVTDCATGQAFQALSG------HSGHVLSL-YNWGG------ATVLSGSHDRTVRFWDLRTRGCTNVLTPI 90 (93)
Q Consensus 30 ~~v~~~~~~~~~~~~~~~~------~~~~v~~~-~~~~~------~~~~s~~~~~~i~~~d~~~~~~~~~~~~~ 90 (93)
-.+-+||+.+++.++.+.- ..+.+..+ +.... ...++=....-+.++|+.+++..+.....
T Consensus 34 pKLv~~Dl~t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv~~~~ 107 (287)
T PF03022_consen 34 PKLVAFDLKTNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRVLHNS 107 (287)
T ss_dssp -EEEEEETTTTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEEETCG
T ss_pred cEEEEEECCCCcEEEEEECChHHcccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEEecCC
Confidence 4788899999988765531 23456666 65522 12334445578999999999888877654
No 436
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=29.46 E-value=99 Score=16.53 Aligned_cols=82 Identities=5% Similarity=-0.040 Sum_probs=42.4
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-E---ecCCCEEEEecCCCcEEEEeCC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-Y---NWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~---~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
..|++++--+-......-++..|+ ...+..||+....-+.- +.-.+.+.++ + ......++-.+.+..|.-||.+
T Consensus 48 ~~italaaG~l~~~~~~D~LliGt-~t~llaYDV~~N~d~Fy-ke~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~ 125 (136)
T PF14781_consen 48 QEITALAAGRLKPDDGRDCLLIGT-QTSLLAYDVENNSDLFY-KEVPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYE 125 (136)
T ss_pred CceEEEEEEecCCCCCcCEEEEec-cceEEEEEcccCchhhh-hhCccceeEEEEEecCCCCCcEEEECceEEEEEeCCC
Confidence 356666554421111222344454 88999999887655432 1223444554 3 2223344444456677777776
Q ss_pred CCceeeEe
Q psy14456 80 TRGCTNVL 87 (93)
Q Consensus 80 ~~~~~~~~ 87 (93)
-.+.....
T Consensus 126 G~e~fWtV 133 (136)
T PF14781_consen 126 GNEIFWTV 133 (136)
T ss_pred CcEEEEEe
Confidence 55444433
No 437
>KOG3630|consensus
Probab=29.25 E-value=2.5e+02 Score=21.21 Aligned_cols=29 Identities=10% Similarity=0.044 Sum_probs=21.2
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDC 37 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 37 (93)
..+++++|+|. +..++.+- .+|++.-|..
T Consensus 199 ~~~Tav~WSpr----GKQl~iG~-nnGt~vQy~P 227 (1405)
T KOG3630|consen 199 NSQTAVLWSPR----GKQLFIGR-NNGTEVQYEP 227 (1405)
T ss_pred cceeeEEeccc----cceeeEec-CCCeEEEeec
Confidence 56899999997 56555544 5888887654
No 438
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=29.22 E-value=2.1e+02 Score=20.21 Aligned_cols=66 Identities=15% Similarity=0.083 Sum_probs=42.0
Q ss_pred eEEEeeeCCCeEEEEeCCCCceeEEeeccccc--------eEEE-E-e---------------cCCCEEEEecCCCcEEE
Q psy14456 21 LLISGGAGDCKIYVTDCATGQAFQALSGHSGH--------VLSL-Y-N---------------WGGATVLSGSHDRTVRF 75 (93)
Q Consensus 21 ~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~--------v~~~-~-~---------------~~~~~~~s~~~~~~i~~ 75 (93)
.++.+. .++.|...|.++|+.+-.+...... ...+ + . .....++.++.|+.+.-
T Consensus 196 ~lYv~t-~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~LiA 274 (764)
T TIGR03074 196 TLYLCT-PHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLIA 274 (764)
T ss_pred EEEEEC-CCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEEE
Confidence 344444 4788888899999877655422110 1112 1 1 12336777888999999
Q ss_pred EeCCCCceeeEe
Q psy14456 76 WDLRTRGCTNVL 87 (93)
Q Consensus 76 ~d~~~~~~~~~~ 87 (93)
.|.++|+....|
T Consensus 275 LDA~TGk~~W~f 286 (764)
T TIGR03074 275 LDADTGKLCEDF 286 (764)
T ss_pred EECCCCCEEEEe
Confidence 999999877655
No 439
>PF13964 Kelch_6: Kelch motif
Probab=28.99 E-value=54 Score=13.33 Aligned_cols=22 Identities=18% Similarity=0.253 Sum_probs=10.5
Q ss_pred cceEEEeeeCC-----CeEEEEeCCCC
Q psy14456 19 SSLLISGGAGD-----CKIYVTDCATG 40 (93)
Q Consensus 19 ~~~~~~~g~~~-----~~v~~~~~~~~ 40 (93)
+..++.+|..+ ..+.+||.++.
T Consensus 12 ~~iyv~GG~~~~~~~~~~v~~yd~~t~ 38 (50)
T PF13964_consen 12 GKIYVFGGYDNSGKYSNDVERYDPETN 38 (50)
T ss_pred CEEEEECCCCCCCCccccEEEEcCCCC
Confidence 45556656423 23445555443
No 440
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=28.48 E-value=82 Score=15.31 Aligned_cols=38 Identities=16% Similarity=0.024 Sum_probs=20.8
Q ss_pred CCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEE
Q psy14456 28 GDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLS 66 (93)
Q Consensus 28 ~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s 66 (93)
.+|.+.-||..+++....+.+- .-.+.+ +++++..++.
T Consensus 35 ~~GRll~ydp~t~~~~vl~~~L-~fpNGVals~d~~~vlv 73 (89)
T PF03088_consen 35 PTGRLLRYDPSTKETTVLLDGL-YFPNGVALSPDESFVLV 73 (89)
T ss_dssp --EEEEEEETTTTEEEEEEEEE-SSEEEEEE-TTSSEEEE
T ss_pred CCcCEEEEECCCCeEEEehhCC-CccCeEEEcCCCCEEEE
Confidence 3678888888887653333321 122556 7888875543
No 441
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=28.46 E-value=42 Score=12.00 Aligned_cols=8 Identities=63% Similarity=0.999 Sum_probs=3.4
Q ss_pred CCeEEEEe
Q psy14456 29 DCKIYVTD 36 (93)
Q Consensus 29 ~~~v~~~~ 36 (93)
+|.+.+-|
T Consensus 12 ~g~i~VaD 19 (28)
T PF01436_consen 12 DGNIYVAD 19 (28)
T ss_dssp TSEEEEEE
T ss_pred CCCEEEEE
Confidence 44444433
No 442
>COG1424 BioW Pimeloyl-CoA synthetase [Coenzyme metabolism]
Probab=27.28 E-value=1.3e+02 Score=17.30 Aligned_cols=34 Identities=24% Similarity=0.386 Sum_probs=22.0
Q ss_pred CCccceeEEEEEecCCCCcceE--EEeeeCCCeEEEEeCC
Q psy14456 1 MHDGTVRDVCFIEDTSNKSSLL--ISGGAGDCKIYVTDCA 38 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~~~~~~--~~~g~~~~~v~~~~~~ 38 (93)
+|.+-|..++||.+ ..+. ..+|..-|..++.++.
T Consensus 166 ~hp~VvaELC~SDd----~dY~TGYvagkkiGY~Rit~lK 201 (239)
T COG1424 166 AHPGVVAELCWSDD----PDYTTGYVAGKKIGYHRITDLK 201 (239)
T ss_pred cCcceeEEEeecCC----CcceeeeeecceeeeEEeeccc
Confidence 47788999999977 3321 2223346778877754
No 443
>PF15644 Tox-PL: Papain fold toxin 1; PDB: 3B21_A.
Probab=26.69 E-value=96 Score=15.48 Aligned_cols=22 Identities=14% Similarity=0.203 Sum_probs=15.9
Q ss_pred CCEEEEecCCCcEEEEeCCCCc
Q psy14456 61 GATVLSGSHDRTVRFWDLRTRG 82 (93)
Q Consensus 61 ~~~~~s~~~~~~i~~~d~~~~~ 82 (93)
+..+.....++.|..||.++|.
T Consensus 88 gHa~nvv~~~G~i~~~D~Q~G~ 109 (111)
T PF15644_consen 88 GHAFNVVNQNGKIVFLDPQSGK 109 (111)
T ss_dssp TTEEEEEEE-SSEEEEBTTTTB
T ss_pred ceEEEEEeCCCeEEEEeCCCCC
Confidence 5566555778889999998875
No 444
>PRK14751 tetracycline resistance determinant leader peptide; Provisional
Probab=26.06 E-value=50 Score=11.99 Aligned_cols=10 Identities=30% Similarity=1.026 Sum_probs=7.0
Q ss_pred CCCcEEEEeC
Q psy14456 69 HDRTVRFWDL 78 (93)
Q Consensus 69 ~~~~i~~~d~ 78 (93)
.|..|.-||.
T Consensus 13 sdksi~hwdf 22 (28)
T PRK14751 13 SDKSIYHWDF 22 (28)
T ss_pred CcCceeeeee
Confidence 4667777875
No 445
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=25.87 E-value=2e+02 Score=18.79 Aligned_cols=39 Identities=28% Similarity=0.373 Sum_probs=26.5
Q ss_pred ceEEE-Eec-CCCEEEEecCCCcEEEEeCCCCceeeEecCc
Q psy14456 52 HVLSL-YNW-GGATVLSGSHDRTVRFWDLRTRGCTNVLTPI 90 (93)
Q Consensus 52 ~v~~~-~~~-~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~~ 90 (93)
.+.++ +.+ ++.++++...-..|...|.++++....+..+
T Consensus 272 H~Nsi~yd~~dd~iivSsR~~s~V~~Id~~t~~i~Wilg~~ 312 (477)
T PF05935_consen 272 HINSIDYDPSDDSIIVSSRHQSAVIKIDYRTGKIKWILGPP 312 (477)
T ss_dssp -EEEEEEETTTTEEEEEETTT-EEEEEE-TTS-EEEEES-S
T ss_pred ccCccEEeCCCCeEEEEcCcceEEEEEECCCCcEEEEeCCC
Confidence 46778 878 6777778877789999998888877766543
No 446
>cd01211 GAPCenA GAPCenA Phosphotyrosine-binding (PTB) domain. GAPCenA Phosphotyrosine-binding (PTB) domain. GAPCenA is a centrosome-associated GTPase activating protein (GAP) for rab 6. It consists of an N-terminal PTB domain and a C-terminal TBC domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=23.20 E-value=1.3e+02 Score=15.83 Aligned_cols=19 Identities=5% Similarity=0.193 Sum_probs=14.7
Q ss_pred CCCeEEEEeCCCCceeEEe
Q psy14456 28 GDCKIYVTDCATGQAFQAL 46 (93)
Q Consensus 28 ~~~~v~~~~~~~~~~~~~~ 46 (93)
..|.|++.|.+++..+..+
T Consensus 49 seG~V~l~D~~t~~~ias~ 67 (125)
T cd01211 49 IEGTVKLIDAQSNKVIASF 67 (125)
T ss_pred CCceEEEEcCCCCcEEEEE
Confidence 4899999999887665544
No 447
>PF10584 Proteasome_A_N: Proteasome subunit A N-terminal signature; InterPro: IPR000426 The proteasome (or macropain) (3.4.25.1 from EC) [, , , , ] is a eukaryotic and archaeal multicatalytic proteinase complex that seems to be involved in an ATP/ubiquitin-dependent nonlysosomal proteolytic pathway. In eukaryotes the proteasome is composed of about 28 distinct subunits which form a highly ordered ring-shaped structure (20S ring) of about 700 kDa. Most proteasome subunits can be classified, on the basis on sequence similarities into two groups, alpha (A) and beta (B). This family contains the alpha subunit sequences which range from 210 to 290 amino acids. These sequences are classified as non-peptidase homologues in MEROPS peptidase family T1 (clan PB(T)). ; GO: 0004175 endopeptidase activity, 0006511 ubiquitin-dependent protein catabolic process, 0019773 proteasome core complex, alpha-subunit complex; PDB: 3H4P_M 1IRU_O 3UN4_U 1FNT_A 3OEV_G 3OEU_U 3SDK_U 3DY3_G 3MG7_G 3L5Q_C ....
Probab=22.26 E-value=28 Score=12.34 Aligned_cols=7 Identities=14% Similarity=0.278 Sum_probs=3.8
Q ss_pred EecCCCE
Q psy14456 57 YNWGGAT 63 (93)
Q Consensus 57 ~~~~~~~ 63 (93)
|+|+|++
T Consensus 8 FSp~Grl 14 (23)
T PF10584_consen 8 FSPDGRL 14 (23)
T ss_dssp BBTTSSB
T ss_pred ECCCCeE
Confidence 5665543
No 448
>TIGR03054 photo_alph_chp1 putative photosynthetic complex assembly protein. In twenty or so anoxygenic photosynthetic alpha-Proteobacteria known so far, a gene for a member of this protein family is present and is found in the vicinity of puhA, which encodes a component of the photosynthetic reaction center, and other genes associated with photosynthesis. This protein family is suggested, consequently, as a probable assembly factor for the photosynthetic reaction center, but its seems its actual function has not yet been demonstrated.
Probab=21.66 E-value=1.5e+02 Score=15.86 Aligned_cols=59 Identities=14% Similarity=0.028 Sum_probs=42.0
Q ss_pred eeeCCCeEEEEeCCCCceeEEeeccccc-eE-----------EE-EecCCCEEEEecCCCcEEEEeCCCCce
Q psy14456 25 GGAGDCKIYVTDCATGQAFQALSGHSGH-VL-----------SL-YNWGGATVLSGSHDRTVRFWDLRTRGC 83 (93)
Q Consensus 25 ~g~~~~~v~~~~~~~~~~~~~~~~~~~~-v~-----------~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~ 83 (93)
.+..+|.+.+++..+++.+..+...++. +. .. ...+..+.++.-.||.+.+-|..++..
T Consensus 46 ~d~~~G~v~V~~~~~G~~va~~~~g~~GFvrgvlR~l~R~R~~~gv~~~~Pf~L~r~~dGrltL~Dp~Tg~~ 117 (135)
T TIGR03054 46 EDRPDGAVAVVETPDGRLVAILEPGQNGFVRVMLRGLARARARAGVAAEPPFRLTRYDNGRLTLTDPATGWS 117 (135)
T ss_pred ecCCCCeEEEEECCCCCEEEEecCCCCchhhHhHHHHHHHHHHcCCCCCCCEEEEEEeCCcEEEEcCCCCcE
Confidence 3447999999999999988887543322 11 01 234556777888899999999998864
No 449
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=21.65 E-value=2.5e+02 Score=18.53 Aligned_cols=49 Identities=12% Similarity=0.132 Sum_probs=27.7
Q ss_pred CCeEEEEeCCCCceeEEeec-ccc-ceEEE-EecCC--C-EEEEecCCCcEEEEe
Q psy14456 29 DCKIYVTDCATGQAFQALSG-HSG-HVLSL-YNWGG--A-TVLSGSHDRTVRFWD 77 (93)
Q Consensus 29 ~~~v~~~~~~~~~~~~~~~~-~~~-~v~~~-~~~~~--~-~~~s~~~~~~i~~~d 77 (93)
...+.+||..+.+.++.+.- -.+ ....+ |.++. . -++.+...+.|..|-
T Consensus 221 G~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~ 275 (461)
T PF05694_consen 221 GHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFY 275 (461)
T ss_dssp --EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEE
T ss_pred cCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEE
Confidence 57899999999999888853 222 23455 65542 2 355555666665553
No 450
>COG4993 Gcd Glucose dehydrogenase [Carbohydrate transport and metabolism]
Probab=21.28 E-value=3e+02 Score=19.29 Aligned_cols=58 Identities=14% Similarity=0.160 Sum_probs=34.2
Q ss_pred eCCCeEEEEeCCCCceeEEeeccc---cc---e-EEE-Eec--------CCCEEEEecCCCcEEEEeCCCCcee
Q psy14456 27 AGDCKIYVTDCATGQAFQALSGHS---GH---V-LSL-YNW--------GGATVLSGSHDRTVRFWDLRTRGCT 84 (93)
Q Consensus 27 ~~~~~v~~~~~~~~~~~~~~~~~~---~~---v-~~~-~~~--------~~~~~~s~~~~~~i~~~d~~~~~~~ 84 (93)
...|.+.-.|+++++.+...+.-+ .. + ..+ |.- .+-.+..+..|..++.+|..+|+.+
T Consensus 650 p~wGyv~a~DlkTgk~~wk~~~gt~~d~~p~plp~~~g~pt~Ggp~~t~Ggv~f~a~~~dqYLrayd~~~G~~l 723 (773)
T COG4993 650 PPWGYVKAIDLKTGKELWKHRNGTVYDMTPVPLPFKVGFPTLGGPIGTAGGVAFIAATGDQYLRAYDGTGGKQL 723 (773)
T ss_pred CCcceeeeeeccccceeeeccCCccccCcccCcccccccccCCCccccccceEEEecchheeeeeeeccCCcee
Confidence 348888888999988765522100 00 0 011 111 2334556678889999999888654
No 451
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=21.11 E-value=2e+02 Score=17.06 Aligned_cols=69 Identities=12% Similarity=0.088 Sum_probs=38.7
Q ss_pred cceEEEeeeCCCeEEEEeCCCC-c-eeE-Eeec------cccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEec
Q psy14456 19 SSLLISGGAGDCKIYVTDCATG-Q-AFQ-ALSG------HSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 19 ~~~~~~~g~~~~~v~~~~~~~~-~-~~~-~~~~------~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~ 88 (93)
++.++.+|.......+|..... . ... .+.. -.+--..+ ..|+|++++.+..+ -.++|..+...++.+.
T Consensus 129 G~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~--s~i~d~~~n~v~~~lP 206 (243)
T PF07250_consen 129 GRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRG--SIIYDYKTNTVVRTLP 206 (243)
T ss_pred CCEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCC--cEEEeCCCCeEEeeCC
Confidence 6778888865445555544221 1 111 1111 11222345 67899999888754 4667888877666654
Q ss_pred C
Q psy14456 89 P 89 (93)
Q Consensus 89 ~ 89 (93)
.
T Consensus 207 ~ 207 (243)
T PF07250_consen 207 D 207 (243)
T ss_pred C
Confidence 3
Done!