Query psy14456
Match_columns 93
No_of_seqs 129 out of 1375
Neff 11.6
Searched_HMMs 29240
Date Fri Aug 16 20:18:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14456.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14456hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 99.8 5.9E-19 2E-23 99.7 12.2 86 2-92 12-98 (304)
2 4h5i_A Guanine nucleotide-exch 99.8 4.2E-19 1.4E-23 102.6 10.7 75 2-81 268-344 (365)
3 3ow8_A WD repeat-containing pr 99.8 1.7E-18 5.7E-23 98.6 12.0 85 2-91 205-290 (321)
4 1vyh_C Platelet-activating fac 99.8 6.8E-19 2.3E-23 102.9 10.4 85 2-91 107-192 (410)
5 2ymu_A WD-40 repeat protein; u 99.8 1.6E-18 5.3E-23 104.1 12.2 83 2-91 15-98 (577)
6 4gqb_B Methylosome protein 50; 99.8 3.1E-18 1.1E-22 98.5 11.7 82 2-88 126-209 (344)
7 1vyh_C Platelet-activating fac 99.8 3.7E-18 1.3E-22 99.8 10.7 85 2-91 149-234 (410)
8 4ery_A WD repeat-containing pr 99.8 1.4E-17 4.8E-22 93.9 12.6 85 2-91 22-107 (312)
9 2ynn_A Coatomer subunit beta'; 99.8 1.5E-17 5.2E-22 93.9 12.5 85 2-91 54-140 (304)
10 4gqb_B Methylosome protein 50; 99.8 9.1E-18 3.1E-22 96.6 11.7 84 3-92 82-170 (344)
11 3frx_A Guanine nucleotide-bind 99.8 5.7E-18 1.9E-22 96.2 10.7 87 2-92 16-108 (319)
12 4ery_A WD repeat-containing pr 99.8 2.2E-17 7.4E-22 93.2 12.9 85 2-91 64-149 (312)
13 3ow8_A WD repeat-containing pr 99.8 1.7E-17 6E-22 94.5 12.1 85 2-91 163-248 (321)
14 3frx_A Guanine nucleotide-bind 99.8 3.3E-17 1.1E-21 93.1 12.8 83 2-90 64-147 (319)
15 1got_B GT-beta; complex (GTP-b 99.8 4E-17 1.4E-21 93.4 11.9 82 2-88 183-265 (340)
16 2pbi_B Guanine nucleotide-bind 99.8 7.3E-17 2.5E-21 92.9 13.0 86 2-92 153-241 (354)
17 3vl1_A 26S proteasome regulato 99.8 5E-17 1.7E-21 94.5 12.4 83 2-89 138-221 (420)
18 3zwl_B Eukaryotic translation 99.7 7.6E-17 2.6E-21 91.9 12.3 82 2-88 31-113 (369)
19 3vu4_A KMHSV2; beta-propeller 99.7 4.9E-17 1.7E-21 93.6 11.2 75 2-81 194-272 (355)
20 2xzm_R RACK1; ribosome, transl 99.7 6.1E-17 2.1E-21 92.7 11.5 86 2-92 20-119 (343)
21 2pm7_B Protein transport prote 99.7 5.8E-17 2E-21 91.3 11.3 84 2-90 8-98 (297)
22 2hes_X YDR267CP; beta-propelle 99.7 5.8E-17 2E-21 92.4 11.4 85 2-91 106-197 (330)
23 3bg1_A Protein SEC13 homolog; 99.7 4.1E-17 1.4E-21 92.6 10.4 85 2-91 12-103 (316)
24 1got_B GT-beta; complex (GTP-b 99.7 1.5E-16 5.2E-21 91.0 12.8 85 2-92 142-227 (340)
25 4e54_B DNA damage-binding prot 99.7 6.5E-17 2.2E-21 95.0 10.6 78 2-83 118-199 (435)
26 4aow_A Guanine nucleotide-bind 99.7 2.1E-16 7E-21 89.5 12.3 84 2-89 37-126 (340)
27 3f3f_A Nucleoporin SEH1; struc 99.7 1.7E-16 5.8E-21 89.5 11.8 85 2-91 10-110 (351)
28 1nr0_A Actin interacting prote 99.7 1.5E-16 5.1E-21 96.9 12.3 82 2-88 146-229 (611)
29 2xzm_R RACK1; ribosome, transl 99.7 2.9E-16 9.9E-21 89.9 12.8 74 2-80 75-149 (343)
30 1nr0_A Actin interacting prote 99.7 1.4E-16 4.8E-21 97.0 12.0 82 2-88 189-278 (611)
31 3fm0_A Protein CIAO1; WDR39,SG 99.7 2E-16 6.9E-21 90.7 11.8 84 2-90 60-149 (345)
32 3k26_A Polycomb protein EED; W 99.7 6.3E-16 2.2E-20 88.1 13.7 85 2-87 68-154 (366)
33 2aq5_A Coronin-1A; WD40 repeat 99.7 2.4E-16 8.1E-21 91.6 12.1 85 2-91 80-176 (402)
34 2hes_X YDR267CP; beta-propelle 99.7 3.4E-16 1.2E-20 89.3 12.2 85 2-91 57-153 (330)
35 3dm0_A Maltose-binding peripla 99.7 1.9E-16 6.6E-21 97.4 11.8 87 2-92 381-473 (694)
36 4ggc_A P55CDC, cell division c 99.7 2.5E-16 8.6E-21 88.5 11.4 80 6-92 28-110 (318)
37 2aq5_A Coronin-1A; WD40 repeat 99.7 2.4E-16 8.4E-21 91.6 11.5 85 2-91 130-219 (402)
38 4ggc_A P55CDC, cell division c 99.7 1.5E-16 5.2E-21 89.4 10.3 77 2-81 239-316 (318)
39 3sfz_A APAF-1, apoptotic pepti 99.7 2.3E-16 7.9E-21 101.4 12.4 85 2-91 614-699 (1249)
40 1erj_A Transcriptional repress 99.7 4.2E-16 1.4E-20 90.7 12.2 79 5-88 125-204 (393)
41 4gq1_A NUP37; propeller, trans 99.7 1.1E-16 3.9E-21 93.1 9.7 85 2-87 135-225 (393)
42 3mkq_A Coatomer beta'-subunit; 99.7 3.7E-16 1.3E-20 96.9 12.2 85 2-91 12-97 (814)
43 3iz6_a 40S ribosomal protein R 99.7 3.5E-16 1.2E-20 90.7 11.3 84 2-89 204-289 (380)
44 4g56_B MGC81050 protein; prote 99.7 1.5E-16 5.3E-21 91.7 9.8 84 2-91 93-181 (357)
45 2pbi_B Guanine nucleotide-bind 99.7 8.3E-16 2.8E-20 88.5 12.4 84 2-88 195-279 (354)
46 4g56_B MGC81050 protein; prote 99.7 2.8E-16 9.6E-21 90.6 10.4 81 2-87 138-220 (357)
47 1erj_A Transcriptional repress 99.7 7.2E-16 2.5E-20 89.7 11.9 85 2-91 255-352 (393)
48 3jrp_A Fusion protein of prote 99.7 2.7E-16 9.3E-21 89.9 10.0 84 2-90 10-100 (379)
49 2ymu_A WD-40 repeat protein; u 99.7 7.9E-16 2.7E-20 92.5 11.7 84 2-92 466-550 (577)
50 4gga_A P55CDC, cell division c 99.7 4.5E-16 1.5E-20 91.1 10.3 81 3-87 320-402 (420)
51 3fm0_A Protein CIAO1; WDR39,SG 99.7 7.8E-16 2.7E-20 88.3 11.0 85 2-91 14-105 (345)
52 3iz6_a 40S ribosomal protein R 99.7 2E-16 6.9E-21 91.7 8.5 74 2-80 65-139 (380)
53 3lrv_A PRE-mRNA-splicing facto 99.7 9E-16 3.1E-20 87.8 11.1 85 2-91 124-214 (343)
54 3mmy_A MRNA export factor; mRN 99.7 1.6E-15 5.5E-20 86.4 11.9 83 2-86 38-123 (368)
55 3f3f_A Nucleoporin SEH1; struc 99.7 5E-16 1.7E-20 87.6 9.7 85 2-87 213-344 (351)
56 3dm0_A Maltose-binding peripla 99.7 1.5E-15 5.3E-20 93.4 11.3 85 2-89 516-601 (694)
57 1pgu_A Actin interacting prote 99.7 2.3E-15 7.9E-20 90.7 11.4 85 2-91 487-584 (615)
58 4e54_B DNA damage-binding prot 99.7 4E-16 1.4E-20 91.7 7.9 85 2-90 249-337 (435)
59 4aow_A Guanine nucleotide-bind 99.7 5.8E-15 2E-19 83.6 12.4 86 2-90 170-256 (340)
60 1sq9_A Antiviral protein SKI8; 99.7 4.5E-15 1.5E-19 85.7 11.8 81 3-88 233-330 (397)
61 3lrv_A PRE-mRNA-splicing facto 99.7 1.3E-15 4.3E-20 87.2 9.3 80 3-88 170-252 (343)
62 3odt_A Protein DOA1; ubiquitin 99.7 8.9E-15 3.1E-19 81.9 12.3 83 2-91 183-266 (313)
63 4gga_A P55CDC, cell division c 99.7 4.6E-15 1.6E-19 86.8 11.5 80 6-92 108-190 (420)
64 2oit_A Nucleoporin 214KDA; NH2 99.6 2.9E-15 9.9E-20 88.5 10.5 81 2-87 148-229 (434)
65 3mmy_A MRNA export factor; mRN 99.6 4.3E-15 1.5E-19 84.6 10.8 83 2-90 85-170 (368)
66 1k8k_C P40, ARP2/3 complex 41 99.6 7.2E-15 2.5E-19 84.0 11.8 85 2-91 141-244 (372)
67 1k8k_C P40, ARP2/3 complex 41 99.6 2.6E-15 8.8E-20 85.9 9.9 81 1-86 6-89 (372)
68 3dwl_C Actin-related protein 2 99.6 1.4E-16 4.8E-21 91.6 4.6 84 2-90 10-99 (377)
69 3mkq_A Coatomer beta'-subunit; 99.6 8.5E-15 2.9E-19 90.9 12.4 85 2-91 54-140 (814)
70 3i2n_A WD repeat-containing pr 99.6 3.5E-15 1.2E-19 84.9 9.7 86 2-91 17-111 (357)
71 1r5m_A SIR4-interacting protei 99.6 1.6E-14 5.5E-19 83.6 12.2 83 2-90 107-190 (425)
72 1gxr_A ESG1, transducin-like e 99.6 2.5E-14 8.7E-19 80.7 12.7 85 2-91 96-183 (337)
73 3dwl_C Actin-related protein 2 99.6 1.2E-15 4.2E-20 87.7 7.4 84 2-91 145-251 (377)
74 3ei3_B DNA damage-binding prot 99.6 5.4E-15 1.8E-19 85.3 10.0 82 2-89 203-291 (383)
75 3odt_A Protein DOA1; ubiquitin 99.6 2.1E-14 7.1E-19 80.5 12.1 83 2-90 17-103 (313)
76 4h5i_A Guanine nucleotide-exch 99.6 2.1E-14 7.1E-19 83.1 12.4 86 2-92 218-313 (365)
77 3sfz_A APAF-1, apoptotic pepti 99.6 1.5E-14 5.1E-19 93.2 12.9 86 2-92 656-744 (1249)
78 2vdu_B TRNA (guanine-N(7)-)-me 99.6 1.4E-14 4.7E-19 85.5 11.8 84 2-88 194-279 (450)
79 3jro_A Fusion protein of prote 99.6 2.9E-15 1E-19 93.2 9.0 85 2-91 8-99 (753)
80 3gre_A Serine/threonine-protei 99.6 1E-14 3.6E-19 85.3 10.7 84 2-90 213-302 (437)
81 3k26_A Polycomb protein EED; W 99.6 9.3E-15 3.2E-19 83.3 10.2 79 2-85 114-197 (366)
82 1yfq_A Cell cycle arrest prote 99.6 1.6E-14 5.5E-19 81.9 11.0 84 2-90 192-292 (342)
83 1gxr_A ESG1, transducin-like e 99.6 3.1E-14 1E-18 80.4 11.9 82 2-88 140-222 (337)
84 1pgu_A Actin interacting prote 99.6 3.1E-14 1.1E-18 85.8 12.6 81 2-87 159-245 (615)
85 2oaj_A Protein SNI1; WD40 repe 99.6 9.8E-15 3.3E-19 92.5 10.7 77 2-84 487-609 (902)
86 2pm7_B Protein transport prote 99.6 2.9E-14 1E-18 80.3 11.6 78 2-82 52-134 (297)
87 1yfq_A Cell cycle arrest prote 99.6 2.8E-14 9.6E-19 80.9 11.4 82 2-89 10-97 (342)
88 1sq9_A Antiviral protein SKI8; 99.6 1.6E-14 5.6E-19 83.3 10.5 75 2-81 290-396 (397)
89 4a11_B DNA excision repair pro 99.6 1.3E-14 4.5E-19 83.7 10.0 82 2-88 42-139 (408)
90 1r5m_A SIR4-interacting protei 99.6 4E-14 1.4E-18 81.9 12.0 84 2-91 246-330 (425)
91 3v7d_B Cell division control p 99.6 5E-14 1.7E-18 83.0 12.5 83 2-92 120-204 (464)
92 3v7d_B Cell division control p 99.6 6.2E-14 2.1E-18 82.6 12.8 84 2-92 269-353 (464)
93 2xyi_A Probable histone-bindin 99.6 3.1E-14 1.1E-18 83.6 11.5 86 2-91 230-321 (430)
94 2pm9_A Protein WEB1, protein t 99.6 1.3E-14 4.6E-19 84.0 9.7 77 2-83 261-340 (416)
95 3bg1_A Protein SEC13 homolog; 99.6 1.5E-14 5.3E-19 82.0 9.6 78 2-82 56-138 (316)
96 2pm9_A Protein WEB1, protein t 99.6 9.3E-15 3.2E-19 84.7 8.8 86 2-91 213-305 (416)
97 3dw8_B Serine/threonine-protei 99.6 1.8E-14 6.2E-19 84.2 10.1 83 2-90 225-326 (447)
98 3dw8_B Serine/threonine-protei 99.6 1.4E-14 4.9E-19 84.7 9.5 84 2-91 176-273 (447)
99 3ei3_B DNA damage-binding prot 99.6 6.7E-14 2.3E-18 80.7 12.2 80 2-87 162-247 (383)
100 3vl1_A 26S proteasome regulato 99.6 4.2E-14 1.4E-18 82.2 11.2 82 6-92 100-182 (420)
101 3gre_A Serine/threonine-protei 99.6 8.7E-14 3E-18 81.4 11.7 81 3-88 168-253 (437)
102 2xyi_A Probable histone-bindin 99.6 4.8E-14 1.6E-18 82.9 10.6 74 2-80 276-353 (430)
103 4aez_A CDC20, WD repeat-contai 99.6 2.1E-13 7.1E-18 79.4 13.1 83 2-91 175-259 (401)
104 4a11_B DNA excision repair pro 99.6 5.6E-14 1.9E-18 81.0 10.6 81 2-87 244-372 (408)
105 2j04_B YDR362CP, TAU91; beta p 99.6 6.2E-15 2.1E-19 89.0 6.6 85 2-91 307-397 (524)
106 2oaj_A Protein SNI1; WD40 repe 99.6 6.7E-14 2.3E-18 88.7 11.3 80 2-86 150-248 (902)
107 3i2n_A WD repeat-containing pr 99.6 3.1E-14 1.1E-18 81.0 9.0 76 2-82 258-355 (357)
108 3zwl_B Eukaryotic translation 99.6 1.9E-13 6.4E-18 77.9 12.1 79 5-88 177-257 (369)
109 4aez_A CDC20, WD repeat-contai 99.6 1.8E-13 6.1E-18 79.7 11.9 83 2-91 133-217 (401)
110 3jrp_A Fusion protein of prote 99.6 1.3E-13 4.3E-18 78.9 10.8 78 2-82 54-136 (379)
111 2j04_B YDR362CP, TAU91; beta p 99.6 2.5E-14 8.6E-19 86.4 8.2 82 2-89 265-351 (524)
112 1p22_A F-BOX/WD-repeat protein 99.6 2E-13 6.9E-18 80.2 11.8 81 2-91 132-213 (435)
113 2w18_A PALB2, fancn, partner a 99.5 2.2E-13 7.4E-18 78.7 10.7 83 2-87 177-276 (356)
114 2vdu_B TRNA (guanine-N(7)-)-me 99.5 1.1E-13 3.8E-18 81.6 9.8 85 2-91 148-241 (450)
115 1p22_A F-BOX/WD-repeat protein 99.5 5.6E-13 1.9E-17 78.3 12.6 82 2-92 255-337 (435)
116 2j04_A TAU60, YPL007P, hypothe 99.5 1.4E-13 4.7E-18 83.8 10.1 73 2-82 84-162 (588)
117 2oit_A Nucleoporin 214KDA; NH2 99.5 3.9E-14 1.3E-18 83.7 7.3 83 3-89 92-190 (434)
118 2w18_A PALB2, fancn, partner a 99.5 1.4E-13 4.9E-18 79.4 9.2 56 23-78 298-355 (356)
119 2ovr_B FBW7, F-BOX/WD repeat p 99.5 7.6E-13 2.6E-17 77.8 12.4 82 2-92 117-200 (445)
120 4gq1_A NUP37; propeller, trans 99.5 3.2E-14 1.1E-18 82.9 6.4 70 22-91 103-186 (393)
121 2j04_A TAU60, YPL007P, hypothe 99.5 4.4E-13 1.5E-17 81.6 11.2 73 4-83 130-214 (588)
122 2ovr_B FBW7, F-BOX/WD repeat p 99.5 1.3E-12 4.3E-17 76.9 12.1 81 2-91 158-239 (445)
123 3vu4_A KMHSV2; beta-propeller 99.5 7.7E-13 2.6E-17 76.2 10.2 67 22-88 150-235 (355)
124 3jro_A Fusion protein of prote 99.5 1.1E-12 3.7E-17 81.8 11.0 77 2-81 52-133 (753)
125 3bws_A Protein LP49; two-domai 99.4 1.6E-11 5.4E-16 71.7 11.6 83 2-89 168-252 (433)
126 1l0q_A Surface layer protein; 99.4 3.7E-11 1.3E-15 69.4 11.7 82 4-90 32-115 (391)
127 1l0q_A Surface layer protein; 99.3 1E-10 3.4E-15 67.6 12.3 83 3-90 199-285 (391)
128 3bws_A Protein LP49; two-domai 99.3 3.8E-11 1.3E-15 70.1 7.9 81 5-90 124-210 (433)
129 2hqs_A Protein TOLB; TOLB, PAL 99.2 8.7E-10 3E-14 64.8 12.0 76 2-83 177-259 (415)
130 1k32_A Tricorn protease; prote 99.1 2.5E-09 8.6E-14 68.9 9.8 81 2-88 377-468 (1045)
131 1pby_B Quinohemoprotein amine 99.0 9.4E-09 3.2E-13 58.0 10.7 77 5-89 242-319 (337)
132 2hqs_A Protein TOLB; TOLB, PAL 99.0 1.2E-08 4E-13 60.1 11.1 77 2-83 221-303 (415)
133 1nir_A Nitrite reductase; hemo 99.0 1.5E-08 5.1E-13 61.6 11.2 78 6-89 181-266 (543)
134 3u4y_A Uncharacterized protein 99.0 1.8E-08 6.2E-13 57.0 10.6 81 4-89 41-126 (331)
135 2ojh_A Uncharacterized protein 99.0 6E-09 2.1E-13 57.6 8.4 78 2-83 171-261 (297)
136 1nir_A Nitrite reductase; hemo 98.9 2E-08 6.9E-13 61.1 9.0 73 11-89 145-220 (543)
137 3hfq_A Uncharacterized protein 98.9 6.1E-08 2.1E-12 55.3 10.4 76 5-84 241-323 (347)
138 3o4h_A Acylamino-acid-releasin 98.9 4.3E-08 1.5E-12 59.6 10.2 76 7-89 153-235 (582)
139 3vgz_A Uncharacterized protein 98.9 7.3E-08 2.5E-12 54.8 10.5 79 6-88 143-223 (353)
140 1jmx_B Amine dehydrogenase; ox 98.9 5.6E-08 1.9E-12 55.1 9.9 76 5-88 256-333 (349)
141 1ri6_A Putative isomerase YBHE 98.9 3.1E-08 1E-12 56.0 8.3 73 2-79 36-114 (343)
142 3vgz_A Uncharacterized protein 98.8 1.7E-07 5.7E-12 53.3 11.2 80 4-89 231-312 (353)
143 2ecf_A Dipeptidyl peptidase IV 98.8 3.9E-08 1.3E-12 61.0 9.2 74 3-81 36-139 (741)
144 1pby_B Quinohemoprotein amine 98.8 7.6E-08 2.6E-12 54.3 9.3 80 5-88 35-132 (337)
145 2ojh_A Uncharacterized protein 98.8 7.1E-08 2.4E-12 53.3 8.3 75 2-82 40-121 (297)
146 1ri6_A Putative isomerase YBHE 98.8 3.3E-07 1.1E-11 51.7 10.6 73 5-82 232-312 (343)
147 2ecf_A Dipeptidyl peptidase IV 98.7 8.4E-08 2.9E-12 59.6 8.5 76 5-87 110-188 (741)
148 2oiz_A Aromatic amine dehydrog 98.7 6.4E-07 2.2E-11 51.9 11.3 72 9-87 259-343 (361)
149 3pe7_A Oligogalacturonate lyas 98.7 8.9E-08 3E-12 55.2 7.7 75 9-87 41-118 (388)
150 3u4y_A Uncharacterized protein 98.7 4.3E-07 1.5E-11 51.3 10.3 70 19-89 9-81 (331)
151 1jmx_B Amine dehydrogenase; ox 98.7 7.5E-08 2.6E-12 54.6 6.6 74 5-82 44-136 (349)
152 1xfd_A DIP, dipeptidyl aminope 98.7 9.4E-08 3.2E-12 59.2 7.4 79 4-88 114-245 (723)
153 2z3z_A Dipeptidyl aminopeptida 98.6 4.1E-07 1.4E-11 56.4 9.0 74 6-83 183-296 (706)
154 1xfd_A DIP, dipeptidyl aminope 98.6 3.7E-08 1.3E-12 61.0 4.3 73 5-83 18-103 (723)
155 3hfq_A Uncharacterized protein 98.6 1.1E-06 3.7E-11 50.2 10.0 76 3-82 85-174 (347)
156 3scy_A Hypothetical bacterial 98.6 1.8E-06 6.1E-11 49.6 10.8 75 5-83 156-245 (361)
157 3scy_A Hypothetical bacterial 98.6 1.2E-06 4.2E-11 50.2 10.1 76 5-85 260-344 (361)
158 2z3z_A Dipeptidyl aminopeptida 98.6 1.2E-07 4.1E-12 58.7 6.2 78 3-86 120-250 (706)
159 1k32_A Tricorn protease; prote 98.6 8.8E-07 3E-11 57.3 10.1 78 5-89 339-418 (1045)
160 1z68_A Fibroblast activation p 98.5 1.6E-07 5.4E-12 58.3 5.5 70 8-83 20-102 (719)
161 3o4h_A Acylamino-acid-releasin 98.5 3.4E-07 1.2E-11 55.7 6.5 75 2-84 193-278 (582)
162 3e5z_A Putative gluconolactona 98.5 1.4E-05 4.9E-10 44.7 12.0 76 4-85 28-104 (296)
163 1z68_A Fibroblast activation p 98.4 5.1E-07 1.7E-11 56.1 5.5 72 6-85 62-144 (719)
164 3azo_A Aminopeptidase; POP fam 98.4 5.2E-06 1.8E-10 51.1 9.5 77 4-84 188-278 (662)
165 2xdw_A Prolyl endopeptidase; a 98.4 4.7E-06 1.6E-10 52.0 9.1 74 4-82 125-219 (710)
166 2dg1_A DRP35, lactonase; beta 98.4 3E-05 1E-09 44.0 11.5 76 4-84 45-125 (333)
167 3c5m_A Oligogalacturonate lyas 98.4 1.3E-06 4.4E-11 50.4 5.9 79 6-88 38-119 (396)
168 4a5s_A Dipeptidyl peptidase 4 98.4 1.1E-06 3.8E-11 55.1 5.9 75 4-85 17-106 (740)
169 1jof_A Carboxy-CIS,CIS-muconat 98.3 1.4E-05 4.9E-10 46.1 10.1 72 4-79 145-223 (365)
170 1jof_A Carboxy-CIS,CIS-muconat 98.3 6.8E-06 2.3E-10 47.5 8.7 73 5-81 255-342 (365)
171 2gop_A Trilobed protease; beta 98.3 1.7E-05 5.7E-10 45.2 10.0 76 5-86 60-167 (347)
172 3azo_A Aminopeptidase; POP fam 98.3 5E-06 1.7E-10 51.2 7.8 74 2-81 128-228 (662)
173 1xip_A Nucleoporin NUP159; bet 98.3 1.5E-05 5.3E-10 47.0 8.9 73 2-87 125-200 (388)
174 4a5s_A Dipeptidyl peptidase 4 98.2 5.8E-06 2E-10 51.9 7.1 72 7-85 65-146 (740)
175 2oiz_A Aromatic amine dehydrog 98.2 7E-06 2.4E-10 47.6 7.0 75 8-86 54-146 (361)
176 1xip_A Nucleoporin NUP159; bet 98.2 6.1E-05 2.1E-09 44.5 10.6 69 6-84 90-159 (388)
177 1qks_A Cytochrome CD1 nitrite 98.2 9.8E-05 3.4E-09 45.6 11.6 78 5-88 198-283 (567)
178 3fvz_A Peptidyl-glycine alpha- 98.2 0.00011 3.8E-09 41.9 11.1 80 5-88 144-235 (329)
179 1q7f_A NHL, brain tumor CG1071 98.2 6.2E-05 2.1E-09 41.8 9.8 71 4-81 207-281 (286)
180 3fvz_A Peptidyl-glycine alpha- 98.1 0.00012 4E-09 41.8 10.7 79 4-87 24-129 (329)
181 2bkl_A Prolyl endopeptidase; m 98.1 1.7E-05 5.9E-10 49.5 7.4 74 3-82 120-213 (695)
182 1q7f_A NHL, brain tumor CG1071 98.1 0.00026 9E-09 39.3 11.0 78 4-88 164-245 (286)
183 3no2_A Uncharacterized protein 98.0 0.00016 5.5E-09 40.6 9.1 67 19-89 5-73 (276)
184 1qks_A Cytochrome CD1 nitrite 98.0 0.00023 7.9E-09 44.0 10.3 68 20-88 167-237 (567)
185 2mad_H Methylamine dehydrogena 97.9 0.00037 1.3E-08 40.8 10.5 58 29-87 297-357 (373)
186 3g4e_A Regucalcin; six bladed 97.9 0.0006 2E-08 38.4 10.7 79 6-88 151-237 (297)
187 3pe7_A Oligogalacturonate lyas 97.9 0.00038 1.3E-08 40.1 10.1 76 6-86 83-183 (388)
188 1mda_H Methylamine dehydrogena 97.9 0.00031 1.1E-08 41.2 9.6 78 9-91 269-357 (368)
189 3e5z_A Putative gluconolactona 97.9 0.00047 1.6E-08 38.5 10.0 76 5-88 173-253 (296)
190 3sjl_D Methylamine dehydrogena 97.9 0.00012 4E-09 43.3 7.6 77 8-88 82-177 (386)
191 3no2_A Uncharacterized protein 97.8 0.00034 1.2E-08 39.3 8.9 67 19-88 136-203 (276)
192 1pjx_A Dfpase, DIISOPROPYLFLUO 97.8 0.0008 2.7E-08 37.7 10.3 73 4-81 226-300 (314)
193 2hz6_A Endoplasmic reticulum t 97.8 8.3E-05 2.8E-09 43.3 6.2 66 19-87 9-75 (369)
194 3dsm_A Uncharacterized protein 97.8 0.0012 4.2E-08 37.7 11.8 76 6-88 46-122 (328)
195 2xdw_A Prolyl endopeptidase; a 97.8 0.00045 1.5E-08 43.3 9.1 70 6-80 173-268 (710)
196 1pjx_A Dfpase, DIISOPROPYLFLUO 97.7 0.0013 4.4E-08 36.8 10.2 78 6-87 174-263 (314)
197 1yr2_A Prolyl oligopeptidase; 97.7 0.00025 8.6E-09 44.7 7.8 72 5-82 164-254 (741)
198 2mad_H Methylamine dehydrogena 97.7 0.0011 3.8E-08 38.8 10.0 74 8-86 70-162 (373)
199 1rwi_B Serine/threonine-protei 97.7 0.00049 1.7E-08 37.8 8.2 75 4-83 192-267 (270)
200 3c75_H MADH, methylamine dehyd 97.7 0.0013 4.4E-08 39.4 10.3 74 9-87 324-409 (426)
201 3c5m_A Oligogalacturonate lyas 97.7 0.0003 1E-08 40.5 7.5 76 4-84 188-277 (396)
202 2bkl_A Prolyl endopeptidase; m 97.6 0.00052 1.8E-08 43.0 8.1 71 7-82 171-263 (695)
203 1yiq_A Quinohemoprotein alcoho 97.6 0.00082 2.8E-08 42.4 8.8 60 30-89 455-514 (689)
204 2gop_A Trilobed protease; beta 97.5 0.0011 3.7E-08 37.7 8.1 58 6-70 106-190 (347)
205 1rwi_B Serine/threonine-protei 97.5 0.0021 7.1E-08 35.2 9.0 73 5-82 151-224 (270)
206 3c75_H MADH, methylamine dehyd 97.5 0.00075 2.6E-08 40.4 7.0 77 8-88 122-217 (426)
207 2dg1_A DRP35, lactonase; beta 97.4 0.0049 1.7E-07 34.8 10.7 75 3-82 86-173 (333)
208 3sjl_D Methylamine dehydrogena 97.4 0.007 2.4E-07 35.9 10.3 60 30-90 311-373 (386)
209 1kb0_A Quinohemoprotein alcoho 97.3 0.0025 8.6E-08 40.2 8.3 59 30-89 457-516 (677)
210 3iuj_A Prolyl endopeptidase; h 97.3 0.0035 1.2E-07 39.4 8.6 73 3-82 128-219 (693)
211 1fwx_A Nitrous oxide reductase 97.3 0.0015 5.2E-08 40.7 6.8 70 6-80 279-361 (595)
212 3dsm_A Uncharacterized protein 97.3 0.0079 2.7E-07 34.4 11.3 78 5-88 85-169 (328)
213 2ghs_A AGR_C_1268P; regucalcin 97.3 0.0081 2.8E-07 34.3 11.1 77 6-87 181-266 (326)
214 2qe8_A Uncharacterized protein 97.2 0.01 3.6E-07 34.0 10.1 82 4-89 67-163 (343)
215 3hrp_A Uncharacterized protein 97.1 0.013 4.5E-07 34.7 9.5 72 5-83 132-206 (409)
216 1mda_H Methylamine dehydrogena 97.0 0.0076 2.6E-07 35.5 8.0 56 31-88 47-113 (368)
217 3dr2_A Exported gluconolactona 97.0 0.016 5.6E-07 32.6 11.6 69 5-79 46-115 (305)
218 3g4e_A Regucalcin; six bladed 96.9 0.02 6.7E-07 32.2 11.4 70 6-83 15-85 (297)
219 3nok_A Glutaminyl cyclase; bet 96.9 0.021 7E-07 32.4 9.0 75 7-89 58-134 (268)
220 1yr2_A Prolyl oligopeptidase; 96.8 0.044 1.5E-06 34.8 10.7 73 5-81 269-351 (741)
221 2z2n_A Virginiamycin B lyase; 96.8 0.023 8E-07 31.3 9.7 70 4-79 15-86 (299)
222 2ghs_A AGR_C_1268P; regucalcin 96.6 0.038 1.3E-06 31.6 10.9 71 6-84 51-122 (326)
223 2z2n_A Virginiamycin B lyase; 96.6 0.032 1.1E-06 30.7 10.6 72 4-82 57-130 (299)
224 2ad6_A Methanol dehydrogenase 96.6 0.035 1.2E-06 34.5 8.6 60 29-89 443-503 (571)
225 1kv9_A Type II quinohemoprotei 96.5 0.035 1.2E-06 35.0 8.4 60 29-89 437-497 (668)
226 3hrp_A Uncharacterized protein 96.4 0.063 2.1E-06 31.8 11.3 70 8-83 271-357 (409)
227 2hz6_A Endoplasmic reticulum t 96.4 0.00067 2.3E-08 39.6 0.3 62 21-87 94-156 (369)
228 3nol_A Glutamine cyclotransfer 96.4 0.053 1.8E-06 30.6 10.6 77 6-89 45-125 (262)
229 2ece_A 462AA long hypothetical 96.3 0.079 2.7E-06 32.4 9.4 59 30-88 164-245 (462)
230 2qe8_A Uncharacterized protein 96.3 0.027 9.4E-07 32.3 6.8 79 5-88 18-110 (343)
231 1flg_A Protein (quinoprotein e 96.3 0.048 1.6E-06 34.0 8.1 60 29-89 465-525 (582)
232 2iwa_A Glutamine cyclotransfer 96.2 0.062 2.1E-06 30.3 11.1 78 6-88 23-103 (266)
233 2ece_A 462AA long hypothetical 96.1 0.032 1.1E-06 34.0 6.4 69 19-88 95-181 (462)
234 3nol_A Glutamine cyclotransfer 95.9 0.093 3.2E-06 29.6 9.2 66 21-88 98-163 (262)
235 3nok_A Glutaminyl cyclase; bet 95.8 0.11 3.7E-06 29.5 10.1 66 20-88 107-172 (268)
236 2iwa_A Glutamine cyclotransfer 95.7 0.12 4.1E-06 29.2 10.0 68 19-88 116-189 (266)
237 2qc5_A Streptogramin B lactona 95.7 0.11 3.9E-06 28.5 10.2 73 4-83 20-94 (300)
238 2qc5_A Streptogramin B lactona 95.6 0.12 4.1E-06 28.4 10.5 73 4-83 62-136 (300)
239 3pbp_A Nucleoporin NUP82; beta 95.4 0.14 4.6E-06 31.2 7.1 70 5-80 67-158 (452)
240 3mbr_X Glutamine cyclotransfer 95.3 0.17 5.7E-06 28.3 10.5 66 21-88 76-141 (243)
241 3iuj_A Prolyl endopeptidase; h 95.3 0.3 1E-05 30.9 11.2 75 5-83 235-317 (693)
242 3qqz_A Putative uncharacterize 94.8 0.25 8.5E-06 27.7 11.1 74 4-82 27-102 (255)
243 3dr2_A Exported gluconolactona 94.6 0.3 1E-05 27.4 7.4 70 6-81 133-225 (305)
244 1yiq_A Quinohemoprotein alcoho 94.4 0.55 1.9E-05 30.0 10.5 56 31-86 276-344 (689)
245 2xe4_A Oligopeptidase B; hydro 94.3 0.2 6.8E-06 32.1 6.2 71 5-82 175-258 (751)
246 1w6s_A Methanol dehydrogenase 94.3 0.3 1E-05 30.8 6.8 59 29-88 452-511 (599)
247 4gq2_M Nucleoporin NUP120; bet 94.0 0.22 7.4E-06 33.0 6.1 37 52-88 237-274 (950)
248 3pbp_A Nucleoporin NUP82; beta 93.9 0.61 2.1E-05 28.5 8.0 35 3-39 124-158 (452)
249 3mbr_X Glutamine cyclotransfer 93.9 0.44 1.5E-05 26.6 11.6 78 6-89 23-103 (243)
250 3q7m_A Lipoprotein YFGL, BAMB; 93.7 0.53 1.8E-05 27.2 8.0 66 21-88 279-345 (376)
251 3sbq_A Nitrous-oxide reductase 93.6 0.23 7.8E-06 31.5 5.4 70 7-80 326-408 (638)
252 1npe_A Nidogen, entactin; glyc 93.6 0.47 1.6E-05 26.1 11.5 78 6-89 169-247 (267)
253 3q7m_A Lipoprotein YFGL, BAMB; 93.1 0.71 2.4E-05 26.6 10.1 68 20-88 54-130 (376)
254 1npe_A Nidogen, entactin; glyc 92.9 0.62 2.1E-05 25.5 11.7 71 6-80 38-110 (267)
255 4gq2_M Nucleoporin NUP120; bet 92.5 0.54 1.9E-05 31.3 6.2 37 5-46 237-273 (950)
256 4fhn_B Nucleoporin NUP120; pro 92.3 0.23 7.7E-06 33.5 4.4 32 57-88 245-276 (1139)
257 1kb0_A Quinohemoprotein alcoho 92.1 1.5 5.1E-05 28.0 10.6 58 31-88 284-354 (677)
258 2p9w_A MAL S 1 allergenic prot 91.4 1.3 4.5E-05 26.0 9.5 77 7-87 16-119 (334)
259 1kv9_A Type II quinohemoprotei 90.7 2.1 7.3E-05 27.2 10.9 57 31-87 271-340 (668)
260 3tc9_A Hypothetical hydrolase; 90.4 1.8 6.3E-05 25.9 8.7 69 7-79 229-300 (430)
261 3hxj_A Pyrrolo-quinoline quino 90.4 1.4 4.9E-05 24.6 7.4 55 28-87 155-210 (330)
262 3f7f_A Nucleoporin NUP120; nuc 90.2 1.1 3.8E-05 29.1 5.7 35 53-88 224-258 (729)
263 4fhn_B Nucleoporin NUP120; pro 90.1 0.64 2.2E-05 31.5 4.8 27 19-46 249-275 (1139)
264 2xe4_A Oligopeptidase B; hydro 89.0 3.2 0.00011 26.8 7.8 71 7-81 224-305 (751)
265 1tl2_A L10, protein (tachylect 88.2 1.8 6E-05 24.2 5.0 65 5-79 42-115 (236)
266 3v65_B Low-density lipoprotein 87.7 2.9 9.9E-05 24.6 10.6 77 6-87 248-325 (386)
267 2p4o_A Hypothetical protein; p 87.1 2.7 9.1E-05 23.7 11.0 72 5-83 33-107 (306)
268 1k3i_A Galactose oxidase precu 86.2 4.7 0.00016 25.5 8.3 65 19-84 254-327 (656)
269 1k3i_A Galactose oxidase precu 85.9 4.8 0.00017 25.5 8.3 65 19-83 198-277 (656)
270 2ad6_A Methanol dehydrogenase 85.7 4.8 0.00016 25.2 8.2 67 21-88 117-193 (571)
271 3f7f_A Nucleoporin NUP120; nuc 85.7 3.1 0.00011 27.2 5.7 27 19-46 231-257 (729)
272 2fp8_A Strictosidine synthase; 85.0 3.6 0.00012 23.2 8.9 75 7-87 188-275 (322)
273 1n7d_A LDL receptor, low-densi 84.0 6.5 0.00022 25.3 6.7 76 7-87 543-621 (699)
274 3v65_B Low-density lipoprotein 82.0 5.9 0.0002 23.3 10.3 73 5-81 117-191 (386)
275 3hxj_A Pyrrolo-quinoline quino 81.5 5.1 0.00017 22.3 7.9 57 28-87 115-172 (330)
276 3kya_A Putative phosphatase; s 80.1 8.5 0.00029 24.0 7.1 68 7-78 250-339 (496)
277 3v64_C Agrin; beta propeller, 79.4 7.1 0.00024 22.6 10.8 77 6-87 205-282 (349)
278 3sov_A LRP-6, low-density lipo 79.3 6.9 0.00024 22.4 11.0 77 6-87 168-245 (318)
279 3v64_C Agrin; beta propeller, 78.6 7.6 0.00026 22.5 11.3 73 5-81 74-148 (349)
280 1fwx_A Nitrous oxide reductase 76.2 13 0.00044 23.9 8.0 70 19-88 101-192 (595)
281 4hw6_A Hypothetical protein, I 75.1 11 0.00038 22.7 8.2 69 7-79 231-303 (433)
282 1n7d_A LDL receptor, low-densi 75.1 7.8 0.00027 25.0 4.9 73 5-81 407-485 (699)
283 3sre_A PON1, serum paraoxonase 73.4 12 0.0004 22.2 6.9 58 6-68 223-285 (355)
284 1ukf_A Avirulence protein AVRP 70.1 7.7 0.00026 20.9 3.5 33 5-41 120-152 (188)
285 3p5b_L Low density lipoprotein 69.4 15 0.00052 21.8 11.4 75 4-82 112-192 (400)
286 1ijq_A LDL receptor, low-densi 69.3 13 0.00045 21.1 10.9 73 5-81 31-109 (316)
287 2xzh_A Clathrin heavy chain 1; 68.3 17 0.00057 21.9 10.2 59 20-79 272-331 (365)
288 1w6s_A Methanol dehydrogenase 66.3 22 0.00077 22.6 10.6 58 30-88 278-350 (599)
289 1bpo_A Protein (clathrin); cla 58.2 32 0.0011 21.6 10.8 59 20-79 271-330 (494)
290 1flg_A Protein (quinoprotein e 55.7 36 0.0012 21.5 11.0 59 30-88 291-363 (582)
291 3p5b_L Low density lipoprotein 50.6 37 0.0013 20.1 11.0 77 6-87 248-327 (400)
292 1ijq_A LDL receptor, low-densi 50.0 34 0.0011 19.4 11.7 76 6-87 166-245 (316)
293 2p9w_A MAL S 1 allergenic prot 49.4 39 0.0013 20.0 9.5 69 6-80 139-215 (334)
294 4a0p_A LRP6, LRP-6, low-densit 48.9 50 0.0017 21.2 11.3 73 5-81 38-112 (628)
295 2be1_A Serine/threonine-protei 45.8 45 0.0015 19.7 7.9 65 20-85 11-81 (339)
296 4a2l_A BT_4663, two-component 45.1 61 0.0021 21.1 11.2 74 4-83 357-439 (795)
297 2xzh_A Clathrin heavy chain 1; 44.9 50 0.0017 19.9 8.3 59 29-90 86-146 (365)
298 3qqz_A Putative uncharacterize 44.8 40 0.0014 18.9 10.1 67 5-77 174-250 (255)
299 3m0c_C LDL receptor, low-densi 41.5 77 0.0026 21.2 10.9 73 5-81 425-503 (791)
300 3m0c_C LDL receptor, low-densi 39.6 83 0.0028 21.0 11.9 71 6-80 473-546 (791)
301 4a0p_A LRP6, LRP-6, low-densit 39.3 75 0.0026 20.4 10.7 76 6-87 168-244 (628)
302 3zwu_A Alkaline phosphatase PH 39.1 77 0.0026 20.4 7.9 56 7-66 479-547 (592)
303 3tc9_A Hypothetical hydrolase; 38.7 64 0.0022 19.4 9.4 30 54-83 229-260 (430)
304 3sov_A LRP-6, low-density lipo 38.0 57 0.002 18.7 10.7 71 6-80 37-110 (318)
305 1bpo_A Protein (clathrin); cla 35.9 83 0.0028 19.9 8.2 59 29-90 85-145 (494)
306 2fp8_A Strictosidine synthase; 35.6 60 0.0021 18.2 10.6 72 5-83 81-177 (322)
307 3s94_A LRP-6, low-density lipo 34.4 91 0.0031 20.0 11.8 74 5-82 41-117 (619)
308 2oqj_C Peptide 2G12.1 (ACPPSHV 32.9 21 0.00071 12.1 1.0 13 74-86 6-18 (26)
309 4a2l_A BT_4663, two-component 32.5 1E+02 0.0036 20.1 11.4 71 4-82 406-482 (795)
310 3a9g_A Putative uncharacterize 31.6 79 0.0027 18.4 8.5 69 5-80 30-114 (354)
311 3q6k_A 43.2 kDa salivary prote 31.0 90 0.0031 18.8 8.8 60 29-88 122-198 (381)
312 3kya_A Putative phosphatase; s 28.7 1.1E+02 0.0038 19.2 8.5 59 6-68 141-211 (496)
313 2p4o_A Hypothetical protein; p 27.7 85 0.0029 17.5 10.3 73 5-81 73-148 (306)
314 1xi4_A Clathrin heavy chain; a 26.8 2E+02 0.0069 21.5 6.9 32 21-53 272-303 (1630)
315 2ism_A Putative oxidoreductase 24.8 1.1E+02 0.0037 17.8 8.5 67 6-80 33-114 (352)
316 3amr_A 3-phytase; beta-propell 21.5 1.4E+02 0.0048 17.9 9.6 70 5-79 129-209 (355)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.82 E-value=5.9e-19 Score=99.66 Aligned_cols=86 Identities=10% Similarity=0.079 Sum_probs=79.3
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|++.|.+++|+|+ ++.+++++ .|+.|++||+.++..+..+..|...+.++ |+++++.+++++.|+.+++||+++
T Consensus 12 h~~~V~~~~fsp~----~~~l~s~~-~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~ 86 (304)
T 2ynn_A 12 RSDRVKGIDFHPT----EPWVLTTL-YSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNT 86 (304)
T ss_dssp ECSCEEEEEECSS----SSEEEEEE-TTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTT
T ss_pred CCCceEEEEECCC----CCEEEEEc-CCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCC
Confidence 7889999999999 78888877 69999999999999999999999999999 999999999999999999999999
Q ss_pred CceeeEecCccC
Q psy14456 81 RGCTNVLTPITV 92 (93)
Q Consensus 81 ~~~~~~~~~~~~ 92 (93)
++++..+..|..
T Consensus 87 ~~~~~~~~~h~~ 98 (304)
T 2ynn_A 87 GEKVVDFEAHPD 98 (304)
T ss_dssp CCEEEEEECCSS
T ss_pred CcEEEEEeCCCC
Confidence 999988887753
No 2
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.81 E-value=4.2e-19 Score=102.61 Aligned_cols=75 Identities=13% Similarity=0.038 Sum_probs=67.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEe-eccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQAL-SGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~-~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
|...|++++|+|+ ++++++++ .|+.|++||+++++++..+ .+|...|.++ |+|++.+|++++.|++|++||+.
T Consensus 268 ~~~~V~~~~~Spd----g~~lasgs-~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 268 RFKGITSMDVDMK----GELAVLAS-NDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp SCSCEEEEEECTT----SCEEEEEE-TTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECC
T ss_pred CCCCeEeEEECCC----CCceEEEc-CCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 5678999999999 78877766 6999999999999998875 6899999999 99999999999999999999997
Q ss_pred CC
Q psy14456 80 TR 81 (93)
Q Consensus 80 ~~ 81 (93)
..
T Consensus 343 ~~ 344 (365)
T 4h5i_A 343 LN 344 (365)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.80 E-value=1.7e-18 Score=98.64 Aligned_cols=85 Identities=29% Similarity=0.502 Sum_probs=78.2
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|..+|.+++|+|+ +..+++++ .|+.|++||++.+.....+.+|...+.++ |+|++..+++++.|+.+++||+++
T Consensus 205 h~~~v~~l~~spd----~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~ 279 (321)
T 3ow8_A 205 HAMPIRSLTFSPD----SQLLVTAS-DDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 279 (321)
T ss_dssp CSSCCCEEEECTT----SCEEEEEC-TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred cCCceeEEEEcCC----CCEEEEEc-CCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC
Confidence 6788999999998 77777776 69999999999999999999999999999 999999999999999999999999
Q ss_pred CceeeEecCcc
Q psy14456 81 RGCTNVLTPIT 91 (93)
Q Consensus 81 ~~~~~~~~~~~ 91 (93)
+.+++.+..|.
T Consensus 280 ~~~~~~~~~h~ 290 (321)
T 3ow8_A 280 RTCVHTFFDHQ 290 (321)
T ss_dssp TEEEEEECCCS
T ss_pred CEEEEEEcCCC
Confidence 99999987765
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.80 E-value=6.8e-19 Score=102.93 Aligned_cols=85 Identities=28% Similarity=0.460 Sum_probs=78.4
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|+++|++++|+|+ +..+++++ .|+.|++||..++.....+.+|...|.++ |++++.++++++.|+.+++||+++
T Consensus 107 h~~~V~~~~~~p~----~~~l~s~s-~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~ 181 (410)
T 1vyh_C 107 HRSPVTRVIFHPV----FSVMVSAS-EDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181 (410)
T ss_dssp CSSCEEEEEECSS----SSEEEEEE-SSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTS
T ss_pred cCCcEEEEEEcCC----CCEEEEEe-CCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Confidence 7889999999998 77888876 69999999999999999999999999999 999999999999999999999999
Q ss_pred CceeeEecCcc
Q psy14456 81 RGCTNVLTPIT 91 (93)
Q Consensus 81 ~~~~~~~~~~~ 91 (93)
+.+++.+.+|.
T Consensus 182 ~~~~~~~~~h~ 192 (410)
T 1vyh_C 182 FECIRTMHGHD 192 (410)
T ss_dssp SCEEECCCCCS
T ss_pred CceeEEEcCCC
Confidence 99888887764
No 5
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.80 E-value=1.6e-18 Score=104.11 Aligned_cols=83 Identities=31% Similarity=0.503 Sum_probs=74.4
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|++.|++++|+|+ ++++++++ .|+.|++||. +++++..+.+|.+.|.++ |+|+++++++++.|+.+++||. +
T Consensus 15 H~~~V~~~a~spd----g~~las~~-~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~-~ 87 (577)
T 2ymu_A 15 HSSSVRGVAFSPD----GQTIASAS-DDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-N 87 (577)
T ss_dssp CSSCEEEEEECTT----SSCEEEEE-TTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET-T
T ss_pred CCCcEEEEEECCC----CCEEEEEe-CCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC-C
Confidence 8899999999999 78888876 6999999994 678889999999999999 9999999999999999999995 5
Q ss_pred CceeeEecCcc
Q psy14456 81 RGCTNVLTPIT 91 (93)
Q Consensus 81 ~~~~~~~~~~~ 91 (93)
++.+..+..|.
T Consensus 88 ~~~~~~~~~~~ 98 (577)
T 2ymu_A 88 GQLLQTLTGHS 98 (577)
T ss_dssp SCEEEEECCCS
T ss_pred CCEEEEEECCC
Confidence 77777777664
No 6
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.79 E-value=3.1e-18 Score=98.49 Aligned_cols=82 Identities=24% Similarity=0.320 Sum_probs=74.0
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCC-CEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGG-ATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~-~~~~s~~~~~~i~~~d~~ 79 (93)
|++.|++++|+|+ ++.+++++ .|+.|++||+++++++..+.+|.+.|.++ |++++ ..+++++.|+.+++||++
T Consensus 126 H~~~V~~v~~spd----g~~l~sgs-~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~ 200 (344)
T 4gqb_B 126 HDDIVSTVSVLSS----GTQAVSGS-KDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTR 200 (344)
T ss_dssp CSSCEEEEEECTT----SSEEEEEE-TTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred CCCCEEEEEECCC----CCEEEEEe-CCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeecccccccccccc
Confidence 7889999999998 78888876 69999999999999999999999999999 99976 578999999999999999
Q ss_pred CCceeeEec
Q psy14456 80 TRGCTNVLT 88 (93)
Q Consensus 80 ~~~~~~~~~ 88 (93)
++++...+.
T Consensus 201 ~~~~~~~~~ 209 (344)
T 4gqb_B 201 CPKPASQIG 209 (344)
T ss_dssp SSSCEEECC
T ss_pred ccceeeeee
Confidence 988776654
No 7
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.78 E-value=3.7e-18 Score=99.81 Aligned_cols=85 Identities=27% Similarity=0.462 Sum_probs=78.3
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|++.|.+++|+|+ +..+++++ .|+.|++||+.++.++..+.+|...+.++ |+|++..+++++.|+.+++||+++
T Consensus 149 h~~~V~~v~~~~~----~~~l~sgs-~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~ 223 (410)
T 1vyh_C 149 HTDSVQDISFDHS----GKLLASCS-ADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQT 223 (410)
T ss_dssp CSSCEEEEEECTT----SSEEEEEE-TTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred cCCcEEEEEEcCC----CCEEEEEe-CCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence 7899999999998 67777776 69999999999999999999999999999 999999999999999999999999
Q ss_pred CceeeEecCcc
Q psy14456 81 RGCTNVLTPIT 91 (93)
Q Consensus 81 ~~~~~~~~~~~ 91 (93)
+.++..+.+|.
T Consensus 224 ~~~~~~~~~h~ 234 (410)
T 1vyh_C 224 GYCVKTFTGHR 234 (410)
T ss_dssp CCEEEEEECCS
T ss_pred CcEEEEEeCCC
Confidence 99988887764
No 8
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.78 E-value=1.4e-17 Score=93.94 Aligned_cols=85 Identities=24% Similarity=0.393 Sum_probs=78.0
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|++.|.+++|+|+ ++.+++++ .|+.+++|+..+++....+.+|...+.++ |++++..+++++.|+.+++||+++
T Consensus 22 h~~~v~~~~~s~~----~~~l~s~~-~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~ 96 (312)
T 4ery_A 22 HTKAVSSVKFSPN----GEWLASSS-ADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 96 (312)
T ss_dssp CSSCEEEEEECTT----SSEEEEEE-TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred cCCcEEEEEECCC----CCEEEEee-CCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCC
Confidence 7889999999998 78888876 69999999999999988999999999999 999999999999999999999999
Q ss_pred CceeeEecCcc
Q psy14456 81 RGCTNVLTPIT 91 (93)
Q Consensus 81 ~~~~~~~~~~~ 91 (93)
+.++..+..|.
T Consensus 97 ~~~~~~~~~~~ 107 (312)
T 4ery_A 97 GKCLKTLKGHS 107 (312)
T ss_dssp CCEEEEEECCS
T ss_pred CcEEEEEcCCC
Confidence 99888887664
No 9
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.78 E-value=1.5e-17 Score=93.90 Aligned_cols=85 Identities=26% Similarity=0.367 Sum_probs=75.5
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|..+|.+++|+|+ ++.+++++ .|+.|++||+++++.+..+.+|...+.++ |+|++.++++++.|+.+++||+++
T Consensus 54 ~~~~v~~~~~~~~----~~~l~s~s-~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~ 128 (304)
T 2ynn_A 54 TETPVRAGKFIAR----KNWIIVGS-DDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWEN 128 (304)
T ss_dssp CSSCEEEEEEEGG----GTEEEEEE-TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGG
T ss_pred cCCcEEEEEEeCC----CCEEEEEC-CCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCC
Confidence 6788999999998 78888876 69999999999999999999999999999 999999999999999999999998
Q ss_pred Cc-eeeEecCcc
Q psy14456 81 RG-CTNVLTPIT 91 (93)
Q Consensus 81 ~~-~~~~~~~~~ 91 (93)
+. ..+.+.+|.
T Consensus 129 ~~~~~~~~~~h~ 140 (304)
T 2ynn_A 129 NWALEQTFEGHE 140 (304)
T ss_dssp TTEEEEEECCCC
T ss_pred CcchhhhhcccC
Confidence 74 455666554
No 10
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.78 E-value=9.1e-18 Score=96.57 Aligned_cols=84 Identities=14% Similarity=0.258 Sum_probs=71.8
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeE----EeeccccceEEE-EecCCCEEEEecCCCcEEEEe
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQ----ALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~----~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d 77 (93)
.+.|.+++|+|+ + .+++++ .|+.|++||+++++.+. .+.+|.+.|.++ |++++..+++++.|+.|++||
T Consensus 82 ~~~v~~~~~s~d----~-~l~~~s-~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd 155 (344)
T 4gqb_B 82 EAGVADLTWVGE----R-GILVAS-DSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWD 155 (344)
T ss_dssp SSCEEEEEEETT----T-EEEEEE-TTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCCEEEEEEeCC----C-eEEEEE-CCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 467999999997 3 466655 69999999999886543 345899999999 999999999999999999999
Q ss_pred CCCCceeeEecCccC
Q psy14456 78 LRTRGCTNVLTPITV 92 (93)
Q Consensus 78 ~~~~~~~~~~~~~~~ 92 (93)
++++.+++.+.+|..
T Consensus 156 ~~~~~~~~~~~~h~~ 170 (344)
T 4gqb_B 156 LAQQVVLSSYRAHAA 170 (344)
T ss_dssp TTTTEEEEEECCCSS
T ss_pred CCCCcEEEEEcCcCC
Confidence 999999999988753
No 11
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.78 E-value=5.7e-18 Score=96.23 Aligned_cols=87 Identities=26% Similarity=0.358 Sum_probs=75.0
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC-----CceeEEeeccccceEEE-EecCCCEEEEecCCCcEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT-----GQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-----~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~ 75 (93)
|++.|.+++|+|++ .+.+++++ .|+.|++|++.. +..+..+.+|...+.++ |++++.++++++.|+.+++
T Consensus 16 H~~~V~~l~~~~~~---~~~l~s~s-~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~ 91 (319)
T 3frx_A 16 HNGWVTSLATSAGQ---PNLLLSAS-RDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRL 91 (319)
T ss_dssp CSSCEEEEEECSSC---TTEEEEEE-TTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred ccceEEEEEccCCC---ccEEEEec-CCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEE
Confidence 88999999999973 46677766 799999999764 23467788999999999 9999999999999999999
Q ss_pred EeCCCCceeeEecCccC
Q psy14456 76 WDLRTRGCTNVLTPITV 92 (93)
Q Consensus 76 ~d~~~~~~~~~~~~~~~ 92 (93)
||+++++.++.+.+|..
T Consensus 92 wd~~~~~~~~~~~~h~~ 108 (319)
T 3frx_A 92 WDVATGETYQRFVGHKS 108 (319)
T ss_dssp EETTTTEEEEEEECCSS
T ss_pred EECCCCCeeEEEccCCC
Confidence 99999999988887753
No 12
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.78 E-value=2.2e-17 Score=93.18 Aligned_cols=85 Identities=33% Similarity=0.595 Sum_probs=78.1
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|...|.+++|+|+ ++.+++++ .|+.+++||+++++++..+.+|...+.++ |++++..+++++.|+.+++||+++
T Consensus 64 h~~~v~~~~~~~~----~~~l~s~~-~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 138 (312)
T 4ery_A 64 HKLGISDVAWSSD----SNLLVSAS-DDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 138 (312)
T ss_dssp CSSCEEEEEECTT----SSEEEEEE-TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred CCCceEEEEEcCC----CCEEEEEC-CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Confidence 7789999999998 78888877 69999999999999999999999999999 999999999999999999999999
Q ss_pred CceeeEecCcc
Q psy14456 81 RGCTNVLTPIT 91 (93)
Q Consensus 81 ~~~~~~~~~~~ 91 (93)
+.+...+..|.
T Consensus 139 ~~~~~~~~~~~ 149 (312)
T 4ery_A 139 GKCLKTLPAHS 149 (312)
T ss_dssp CCEEEEECCCS
T ss_pred CEEEEEecCCC
Confidence 99888887664
No 13
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.77 E-value=1.7e-17 Score=94.45 Aligned_cols=85 Identities=22% Similarity=0.363 Sum_probs=77.2
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|...|.+++|+|+ ++++++++ .|+.|++||+++++.+..+.+|...+.++ |+|++.++++++.|+.+++||+++
T Consensus 163 ~~~~v~~~~~spd----g~~lasg~-~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~ 237 (321)
T 3ow8_A 163 RGKFILSIAYSPD----GKYLASGA-IDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH 237 (321)
T ss_dssp SSSCEEEEEECTT----SSEEEEEE-TTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTT
T ss_pred CCceEEEEEECCC----CCEEEEEc-CCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCC
Confidence 4567999999998 78888776 69999999999999999999999999999 999999999999999999999999
Q ss_pred CceeeEecCcc
Q psy14456 81 RGCTNVLTPIT 91 (93)
Q Consensus 81 ~~~~~~~~~~~ 91 (93)
+.....+.+|.
T Consensus 238 ~~~~~~~~~h~ 248 (321)
T 3ow8_A 238 ANLAGTLSGHA 248 (321)
T ss_dssp CCEEEEECCCS
T ss_pred cceeEEEcCCC
Confidence 98888887765
No 14
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.77 E-value=3.3e-17 Score=93.10 Aligned_cols=83 Identities=28% Similarity=0.528 Sum_probs=73.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|+..|.+++|+|+ +.++++++ .|+.|++||+++++.+..+.+|...+.++ |++++..+++++.|+.+++||++
T Consensus 64 h~~~v~~~~~s~d----g~~l~s~s-~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~- 137 (319)
T 3frx_A 64 HSHIVQDCTLTAD----GAYALSAS-WDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK- 137 (319)
T ss_dssp CSSCEEEEEECTT----SSEEEEEE-TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-
T ss_pred CcccEEEEEECCC----CCEEEEEe-CCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-
Confidence 7889999999998 78888877 69999999999999999999999999999 99999999999999999999996
Q ss_pred CceeeEecCc
Q psy14456 81 RGCTNVLTPI 90 (93)
Q Consensus 81 ~~~~~~~~~~ 90 (93)
+.++..+.+|
T Consensus 138 ~~~~~~~~~h 147 (319)
T 3frx_A 138 GQCLATLLGH 147 (319)
T ss_dssp SCEEEEECCC
T ss_pred CCeEEEEecc
Confidence 4455555544
No 15
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.76 E-value=4e-17 Score=93.37 Aligned_cols=82 Identities=27% Similarity=0.449 Sum_probs=74.6
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|++.|.+++|+|+ +..+++++ .|+.|++||++++.++..+.+|...+.++ |+|++..+++++.|+.+++||+++
T Consensus 183 h~~~v~~~~~~~~----~~~l~sg~-~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~ 257 (340)
T 1got_B 183 HTGDVMSLSLAPD----TRLFVSGA-CDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA 257 (340)
T ss_dssp CSSCEEEEEECTT----SSEEEEEE-TTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CCCceEEEEECCC----CCEEEEEe-CCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCC
Confidence 7889999999998 67777776 69999999999999999999999999999 999999999999999999999998
Q ss_pred CceeeEec
Q psy14456 81 RGCTNVLT 88 (93)
Q Consensus 81 ~~~~~~~~ 88 (93)
+..+..+.
T Consensus 258 ~~~~~~~~ 265 (340)
T 1got_B 258 DQELMTYS 265 (340)
T ss_dssp TEEEEEEC
T ss_pred CcEEEEEc
Confidence 87766654
No 16
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.75 E-value=7.3e-17 Score=92.89 Aligned_cols=86 Identities=26% Similarity=0.489 Sum_probs=77.0
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-Eec--CCCEEEEecCCCcEEEEeC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNW--GGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~--~~~~~~s~~~~~~i~~~d~ 78 (93)
|++.|.+++|+|+ +..+++++ .|+.|++||+++++.+..+.+|...+.++ +++ ++..+++++.|+.+++||+
T Consensus 153 h~~~v~~~~~~~~----~~~l~t~s-~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~ 227 (354)
T 2pbi_B 153 HTNYLSACSFTNS----DMQILTAS-GDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDM 227 (354)
T ss_dssp CSSCEEEEEECSS----SSEEEEEE-TTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEET
T ss_pred cCCcEEEEEEeCC----CCEEEEEe-CCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEEC
Confidence 7888999999998 67788776 69999999999999999999999999999 877 4689999999999999999
Q ss_pred CCCceeeEecCccC
Q psy14456 79 RTRGCTNVLTPITV 92 (93)
Q Consensus 79 ~~~~~~~~~~~~~~ 92 (93)
+++.++..+..|..
T Consensus 228 ~~~~~~~~~~~h~~ 241 (354)
T 2pbi_B 228 RSGQCVQAFETHES 241 (354)
T ss_dssp TTCCEEEEECCCSS
T ss_pred CCCcEEEEecCCCC
Confidence 99999988877653
No 17
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.75 E-value=5e-17 Score=94.47 Aligned_cols=83 Identities=25% Similarity=0.377 Sum_probs=76.6
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|.+.|.+++|+|+ ++.+++++ .|+.|++||+++++.+..+.+|...+.++ |+|++..+++++.|+.+++||+++
T Consensus 138 h~~~v~~~~~~~~----~~~l~s~s-~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 212 (420)
T 3vl1_A 138 HVSEITKLKFFPS----GEALISSS-QDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGT 212 (420)
T ss_dssp SSSCEEEEEECTT----SSEEEEEE-TTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT
T ss_pred ccCccEEEEECCC----CCEEEEEe-CCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCC
Confidence 7889999999998 77777776 69999999999999999999999999999 999999999999999999999999
Q ss_pred CceeeEecC
Q psy14456 81 RGCTNVLTP 89 (93)
Q Consensus 81 ~~~~~~~~~ 89 (93)
++....+..
T Consensus 213 ~~~~~~~~~ 221 (420)
T 3vl1_A 213 GTTIHTFNR 221 (420)
T ss_dssp TEEEEEECB
T ss_pred CceeEEeec
Confidence 998888864
No 18
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.75 E-value=7.6e-17 Score=91.88 Aligned_cols=82 Identities=23% Similarity=0.454 Sum_probs=75.7
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|++.|++++|+|+ ++.+++++ .|+.|++||+.+++.+..+.+|...+.++ |++++..+++++.|+.+.+||+++
T Consensus 31 h~~~v~~~~~s~~----~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 105 (369)
T 3zwl_B 31 HERPLTQVKYNKE----GDLLFSCS-KDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSN 105 (369)
T ss_dssp CSSCEEEEEECTT----SCEEEEEE-SSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTT
T ss_pred eeceEEEEEEcCC----CCEEEEEe-CCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 8899999999998 78888876 59999999999999999999999999999 999999999999999999999999
Q ss_pred CceeeEec
Q psy14456 81 RGCTNVLT 88 (93)
Q Consensus 81 ~~~~~~~~ 88 (93)
++....+.
T Consensus 106 ~~~~~~~~ 113 (369)
T 3zwl_B 106 GQCVATWK 113 (369)
T ss_dssp CCEEEEEE
T ss_pred CcEEEEee
Confidence 98877765
No 19
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.74 E-value=4.9e-17 Score=93.61 Aligned_cols=75 Identities=16% Similarity=0.286 Sum_probs=68.9
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCe-EEEEeCCCCceeEEee-c-cccceEEE-EecCCCEEEEecCCCcEEEEe
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCK-IYVTDCATGQAFQALS-G-HSGHVLSL-YNWGGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~-v~~~~~~~~~~~~~~~-~-~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d 77 (93)
|++.|.+++|+|+ +.++++++ .|+. |++||+++++++..+. + |...+.++ |+|++.++++++.|+.+++||
T Consensus 194 h~~~v~~~~~s~~----g~~l~s~s-~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~ 268 (355)
T 3vu4_A 194 HTNPIKMVRLNRK----SDMVATCS-QDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFE 268 (355)
T ss_dssp CSSCEEEEEECTT----SSEEEEEE-TTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEE
T ss_pred cCCceEEEEECCC----CCEEEEEe-CCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEE
Confidence 7889999999998 78888876 6998 9999999999999997 5 99999999 999999999999999999999
Q ss_pred CCCC
Q psy14456 78 LRTR 81 (93)
Q Consensus 78 ~~~~ 81 (93)
++.+
T Consensus 269 ~~~~ 272 (355)
T 3vu4_A 269 IFND 272 (355)
T ss_dssp SSCC
T ss_pred ccCC
Confidence 9865
No 20
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.74 E-value=6.1e-17 Score=92.66 Aligned_cols=86 Identities=29% Similarity=0.389 Sum_probs=73.8
Q ss_pred CccceeEEEE-----Ee-cCCCCcceEEEeeeCCCeEEEEeCCCC-------ceeEEeeccccceEEE-EecCCCEEEEe
Q psy14456 2 HDGTVRDVCF-----IE-DTSNKSSLLISGGAGDCKIYVTDCATG-------QAFQALSGHSGHVLSL-YNWGGATVLSG 67 (93)
Q Consensus 2 h~~~v~~~~~-----~~-~~~~~~~~~~~~g~~~~~v~~~~~~~~-------~~~~~~~~~~~~v~~~-~~~~~~~~~s~ 67 (93)
|++.|++++| ++ + ++.+++++ .|+.|++|++... .....+.+|...|.++ |++++.+++++
T Consensus 20 H~~~V~~~~~~~s~~~~~d----~~~l~sgs-~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~ 94 (343)
T 2xzm_R 20 HSDWVTSIVAGFSQKENED----SPVLISGS-RDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISS 94 (343)
T ss_dssp CSSCEEEEEECCCSSTTCC----CCEEEEEE-TTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEE
T ss_pred chhhhhheeeEEEeecCCC----CCEEEEEc-CCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEE
Confidence 8899999999 55 4 67777766 6999999998743 3456788999999999 99999999999
Q ss_pred cCCCcEEEEeCCCCceeeEecCccC
Q psy14456 68 SHDRTVRFWDLRTRGCTNVLTPITV 92 (93)
Q Consensus 68 ~~~~~i~~~d~~~~~~~~~~~~~~~ 92 (93)
+.|+.+++||+++++.+..+.+|..
T Consensus 95 s~D~~v~lwd~~~~~~~~~~~~h~~ 119 (343)
T 2xzm_R 95 SWDKTLRLWDLRTGTTYKRFVGHQS 119 (343)
T ss_dssp ETTSEEEEEETTSSCEEEEEECCCS
T ss_pred cCCCcEEEEECCCCcEEEEEcCCCC
Confidence 9999999999999999888877753
No 21
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.74 E-value=5.8e-17 Score=91.26 Aligned_cols=84 Identities=19% Similarity=0.245 Sum_probs=70.5
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC--CceeEEeeccccceEEE-Eec--CCCEEEEecCCCcEEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT--GQAFQALSGHSGHVLSL-YNW--GGATVLSGSHDRTVRFW 76 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~--~~~~~~~~~~~~~v~~~-~~~--~~~~~~s~~~~~~i~~~ 76 (93)
|++.|.+++|+|+ ++++++++ .|+.|++|++.. .+.+..+.+|.+.|.++ |++ ++..+++++.|+.+++|
T Consensus 8 h~~~V~~~~~s~~----g~~las~s-~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 8 HNEMIHDAVMDYY----GKRMATCS-SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp CSSCEEEEEECTT----SSEEEEEE-TTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred CcCceEEEEECCC----CCEEEEEe-CCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 8899999999998 78888877 699999999874 35678889999999999 975 38899999999999999
Q ss_pred eCCCCc--eeeEecCc
Q psy14456 77 DLRTRG--CTNVLTPI 90 (93)
Q Consensus 77 d~~~~~--~~~~~~~~ 90 (93)
|++++. .+..+..|
T Consensus 83 d~~~~~~~~~~~~~~h 98 (297)
T 2pm7_B 83 KEENGRWSQIAVHAVH 98 (297)
T ss_dssp EBSSSCBCCCEEECCC
T ss_pred EcCCCceEEEEEeecC
Confidence 998764 34444444
No 22
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.74 E-value=5.8e-17 Score=92.44 Aligned_cols=85 Identities=25% Similarity=0.388 Sum_probs=70.1
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC----ceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG----QAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFW 76 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~----~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~ 76 (93)
|++.|.+++|+|+ ++++++++ .|+.|++||++.. +++..+.+|...+.++ |+|++..+++++.|+.+++|
T Consensus 106 h~~~V~~v~~sp~----g~~las~s-~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW 180 (330)
T 2hes_X 106 HENEVKGVAWSND----GYYLATCS-RDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIW 180 (330)
T ss_dssp ---CEEEEEECTT----SCEEEEEE-TTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred CCCcEEEEEECCC----CCEEEEEe-CCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEE
Confidence 7789999999998 77888876 6999999999432 4567788999999999 99999999999999999999
Q ss_pred eCCCC--ceeeEecCcc
Q psy14456 77 DLRTR--GCTNVLTPIT 91 (93)
Q Consensus 77 d~~~~--~~~~~~~~~~ 91 (93)
|.+++ .++..+.+|.
T Consensus 181 ~~~~~~~~~~~~~~~h~ 197 (330)
T 2hes_X 181 KDYDDDWECVAVLNGHE 197 (330)
T ss_dssp EEETTEEEEEEEECCCS
T ss_pred ECCCCCeeEEEEccCCC
Confidence 98776 5677776664
No 23
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.74 E-value=4.1e-17 Score=92.62 Aligned_cols=85 Identities=21% Similarity=0.278 Sum_probs=69.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCc--eeEEeeccccceEEE-Eec--CCCEEEEecCCCcEEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQ--AFQALSGHSGHVLSL-YNW--GGATVLSGSHDRTVRFW 76 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~--~~~~~~~~~~~v~~~-~~~--~~~~~~s~~~~~~i~~~ 76 (93)
|++.|.+++|+|+ ++++++++ .|+.|++||++++. .+..+.+|.+.|.++ |++ ++..+++++.|+.+++|
T Consensus 12 H~~~V~~v~~s~~----g~~lasgs-~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 12 HEDMIHDAQMDYY----GTRLATCS-SDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIW 86 (316)
T ss_dssp --CCEEEEEECGG----GCEEEEEE-TTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEE
T ss_pred ccCeEEEeeEcCC----CCEEEEEe-CCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEE
Confidence 7899999999998 78888876 69999999998764 456788999999999 975 48899999999999999
Q ss_pred eCCCCc--eeeEecCcc
Q psy14456 77 DLRTRG--CTNVLTPIT 91 (93)
Q Consensus 77 d~~~~~--~~~~~~~~~ 91 (93)
|++++. ....+..|.
T Consensus 87 d~~~~~~~~~~~~~~h~ 103 (316)
T 3bg1_A 87 REENGTWEKSHEHAGHD 103 (316)
T ss_dssp CCSSSCCCEEEEECCCS
T ss_pred ECCCCcceEEEEccCCC
Confidence 999874 455555553
No 24
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.74 E-value=1.5e-16 Score=90.98 Aligned_cols=85 Identities=28% Similarity=0.530 Sum_probs=76.1
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|.+.|.++.|+++ +. +++++ .|+.|++||+++++.+..+.+|...+.++ |+|++.++++++.|+.+++||+++
T Consensus 142 h~~~v~~~~~~~~----~~-l~s~s-~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~ 215 (340)
T 1got_B 142 HTGYLSCCRFLDD----NQ-IVTSS-GDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE 215 (340)
T ss_dssp CSSCEEEEEEEET----TE-EEEEE-TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CCccEEEEEECCC----Cc-EEEEE-CCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 7788999999987 43 66665 59999999999999999999999999999 999999999999999999999999
Q ss_pred CceeeEecCccC
Q psy14456 81 RGCTNVLTPITV 92 (93)
Q Consensus 81 ~~~~~~~~~~~~ 92 (93)
+.+...+..|..
T Consensus 216 ~~~~~~~~~h~~ 227 (340)
T 1got_B 216 GMCRQTFTGHES 227 (340)
T ss_dssp CSEEEEECCCSS
T ss_pred CeeEEEEcCCcC
Confidence 999888877653
No 25
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.73 E-value=6.5e-17 Score=95.02 Aligned_cols=78 Identities=17% Similarity=0.210 Sum_probs=63.9
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCce--eEEeeccccceEEE-Eec-CCCEEEEecCCCcEEEEe
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQA--FQALSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~--~~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d 77 (93)
|..+|++++|+|.. ..++++++ .||.|++||+.++.. ...+.+|.+.|.++ |+| ++..|++++.|+.|++||
T Consensus 118 ~~~~V~~l~~~P~~---~~~lasGs-~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd 193 (435)
T 4e54_B 118 FDRRATSLAWHPTH---PSTVAVGS-KGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQD 193 (435)
T ss_dssp CSSCEEEEEECSSC---TTCEEEEE-TTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEE
T ss_pred CCCCEEEEEEeCCC---CCEEEEEe-CCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEee
Confidence 56789999999963 45555554 799999999987654 34556899999999 998 688999999999999999
Q ss_pred CCCCce
Q psy14456 78 LRTRGC 83 (93)
Q Consensus 78 ~~~~~~ 83 (93)
++++..
T Consensus 194 ~~~~~~ 199 (435)
T 4e54_B 194 FKGNIL 199 (435)
T ss_dssp TTSCEE
T ss_pred ccCCce
Confidence 987644
No 26
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.73 E-value=2.1e-16 Score=89.53 Aligned_cols=84 Identities=30% Similarity=0.425 Sum_probs=70.7
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCc-----eeEEeeccccceEEE-EecCCCEEEEecCCCcEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQ-----AFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~-----~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~ 75 (93)
|++.|++++|+|++ ++++++++ .|+.|++||+...+ +...+.+|...|.++ |++++.++++++.|+.+.+
T Consensus 37 H~~~V~~v~~sp~~---~~~l~S~s-~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~ 112 (340)
T 4aow_A 37 HNGWVTQIATTPQF---PDMILSAS-RDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRL 112 (340)
T ss_dssp CSSCEEEEEECTTC---TTEEEEEE-TTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred ccCCEEEEEEeCCC---CCEEEEEc-CCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceE
Confidence 89999999999973 46677766 69999999987643 456778999999999 9999999999999999999
Q ss_pred EeCCCCceeeEecC
Q psy14456 76 WDLRTRGCTNVLTP 89 (93)
Q Consensus 76 ~d~~~~~~~~~~~~ 89 (93)
|+............
T Consensus 113 ~~~~~~~~~~~~~~ 126 (340)
T 4aow_A 113 WDLTTGTTTRRFVG 126 (340)
T ss_dssp EETTTTEEEEEEEC
T ss_pred EeecccceeeeecC
Confidence 99998766555443
No 27
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.73 E-value=1.7e-16 Score=89.54 Aligned_cols=85 Identities=20% Similarity=0.277 Sum_probs=71.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC----ceeEEeeccccceEEE-Eec--CCCEEEEecCCCcEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG----QAFQALSGHSGHVLSL-YNW--GGATVLSGSHDRTVR 74 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~----~~~~~~~~~~~~v~~~-~~~--~~~~~~s~~~~~~i~ 74 (93)
|++.|++++|+|+ ++.+++++ .|+.|++|++.++ .....+.+|...+.++ |++ ++..+++++.|+.++
T Consensus 10 H~~~v~~~~~~~~----~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 10 HDDLVHDVVYDFY----GRHVATCS-SDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CSSCEEEEEECSS----SSEEEEEE-TTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred cccceeEEEEcCC----CCEEEEee-CCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 8899999999998 78888876 6999999999876 3566778899999999 998 589999999999999
Q ss_pred EEeCCCC---------ceeeEecCcc
Q psy14456 75 FWDLRTR---------GCTNVLTPIT 91 (93)
Q Consensus 75 ~~d~~~~---------~~~~~~~~~~ 91 (93)
+||++++ .....+..|.
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~ 110 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSK 110 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCS
T ss_pred EEecCCCcccccccCcceeeeecccC
Confidence 9999886 4455555543
No 28
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.73 E-value=1.5e-16 Score=96.89 Aligned_cols=82 Identities=21% Similarity=0.235 Sum_probs=73.6
Q ss_pred CccceeEEEEEecCCCCcc-eEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSS-LLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~-~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
|++.|.+++|+|+ +. .+++++ .|+.+++||..++++...+.+|...|.++ |+|++.++++++.|+.+++||++
T Consensus 146 h~~~v~~v~f~p~----~~~~l~s~s-~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~ 220 (611)
T 1nr0_A 146 QARAMNSVDFKPS----RPFRIISGS-DDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGV 220 (611)
T ss_dssp CSSCEEEEEECSS----SSCEEEEEE-TTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCCCceEEEECCC----CCeEEEEEe-CCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECC
Confidence 7789999999998 55 466655 69999999999988888999999999999 99999999999999999999999
Q ss_pred CCceeeEec
Q psy14456 80 TRGCTNVLT 88 (93)
Q Consensus 80 ~~~~~~~~~ 88 (93)
++++...+.
T Consensus 221 ~g~~~~~~~ 229 (611)
T 1nr0_A 221 DGTKTGVFE 229 (611)
T ss_dssp TCCEEEECB
T ss_pred CCcEeeeec
Confidence 998877773
No 29
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.73 E-value=2.9e-16 Score=89.86 Aligned_cols=74 Identities=23% Similarity=0.483 Sum_probs=68.4
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|+..|.+++|+|+ +.++++++ .|+.|++||+++++.+..+.+|...+.++ |+|++..+++++.|+.+++||+..
T Consensus 75 h~~~V~~~~~~~~----~~~l~s~s-~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~ 149 (343)
T 2xzm_R 75 HNHFVSDLALSQE----NCFAISSS-WDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG 149 (343)
T ss_dssp CSSCEEEEEECSS----TTEEEEEE-TTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS
T ss_pred CCCceEEEEECCC----CCEEEEEc-CCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC
Confidence 7789999999998 77777766 69999999999999999999999999999 999999999999999999999974
No 30
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.73 E-value=1.4e-16 Score=97.01 Aligned_cols=82 Identities=29% Similarity=0.503 Sum_probs=73.9
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEee-------ccccceEEE-EecCCCEEEEecCCCcE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALS-------GHSGHVLSL-YNWGGATVLSGSHDRTV 73 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~-------~~~~~v~~~-~~~~~~~~~s~~~~~~i 73 (93)
|++.|.+++|+|+ ++.+++++ .|+.|++||..+++.+..+. +|.+.|.++ |+|++..+++++.|+.+
T Consensus 189 H~~~V~~v~fspd----g~~las~s-~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v 263 (611)
T 1nr0_A 189 HTKFVHSVRYNPD----GSLFASTG-GDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTI 263 (611)
T ss_dssp CSSCEEEEEECTT----SSEEEEEE-TTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred ccCceEEEEECCC----CCEEEEEE-CCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeE
Confidence 7889999999998 78888876 69999999999998887774 799999999 99999999999999999
Q ss_pred EEEeCCCCceeeEec
Q psy14456 74 RFWDLRTRGCTNVLT 88 (93)
Q Consensus 74 ~~~d~~~~~~~~~~~ 88 (93)
++||++++++...+.
T Consensus 264 ~lWd~~~~~~~~~~~ 278 (611)
T 1nr0_A 264 KIWNVATLKVEKTIP 278 (611)
T ss_dssp EEEETTTTEEEEEEE
T ss_pred EEEeCCCCceeeeec
Confidence 999999988877664
No 31
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.73 E-value=2e-16 Score=90.67 Aligned_cols=84 Identities=25% Similarity=0.414 Sum_probs=71.4
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC--ceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG--QAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~ 78 (93)
|++.|.+++|+|+ ++++++++ .|+.+++|+.+.+ .++..+.+|...|.++ |+|++.++++++.|+.+++||+
T Consensus 60 h~~~v~~~~~sp~----g~~l~s~s-~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~ 134 (345)
T 3fm0_A 60 HQRTVRKVAWSPC----GNYLASAS-FDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEV 134 (345)
T ss_dssp CSSCEEEEEECTT----SSEEEEEE-TTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred cCCcEEEEEECCC----CCEEEEEE-CCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEEC
Confidence 7889999999998 78888876 6999999998876 4567888999999999 9999999999999999999999
Q ss_pred CCCc---eeeEecCc
Q psy14456 79 RTRG---CTNVLTPI 90 (93)
Q Consensus 79 ~~~~---~~~~~~~~ 90 (93)
+++. ++..+..|
T Consensus 135 ~~~~~~~~~~~~~~h 149 (345)
T 3fm0_A 135 DEEDEYECVSVLNSH 149 (345)
T ss_dssp CTTSCEEEEEEECCC
T ss_pred CCCCCeEEEEEecCc
Confidence 8763 34445444
No 32
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.72 E-value=6.3e-16 Score=88.10 Aligned_cols=85 Identities=21% Similarity=0.346 Sum_probs=74.5
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-Eec-CCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d~~ 79 (93)
|.+.|++++|+|+....+..+++++ .|+.|++||+.+++.+..+.+|...+.++ |+| ++..+++++.|+.+++||++
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 146 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAG-SRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQ 146 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEE-TTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred CCCcEEEEEeccCCCCCCCEEEEec-CCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEee
Confidence 5678999999998433234666665 69999999999999999999999999999 999 89999999999999999999
Q ss_pred CCceeeEe
Q psy14456 80 TRGCTNVL 87 (93)
Q Consensus 80 ~~~~~~~~ 87 (93)
+++....+
T Consensus 147 ~~~~~~~~ 154 (366)
T 3k26_A 147 TDTLVAIF 154 (366)
T ss_dssp TTEEEEEE
T ss_pred cCeEEEEe
Confidence 99888887
No 33
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.72 E-value=2.4e-16 Score=91.63 Aligned_cols=85 Identities=24% Similarity=0.438 Sum_probs=74.5
Q ss_pred CccceeEEEEEe-cCCCCcceEEEeeeCCCeEEEEeCCCC-------ceeEEeeccccceEEE-EecCC-CEEEEecCCC
Q psy14456 2 HDGTVRDVCFIE-DTSNKSSLLISGGAGDCKIYVTDCATG-------QAFQALSGHSGHVLSL-YNWGG-ATVLSGSHDR 71 (93)
Q Consensus 2 h~~~v~~~~~~~-~~~~~~~~~~~~g~~~~~v~~~~~~~~-------~~~~~~~~~~~~v~~~-~~~~~-~~~~s~~~~~ 71 (93)
|++.|++++|+| + +..+++++ .|+.|++|++.++ ..+..+.+|...+.++ |+|++ ..+++++.|+
T Consensus 80 h~~~V~~~~~~p~~----~~~l~s~s-~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 154 (402)
T 2aq5_A 80 HTAPVLDIAWCPHN----DNVIASGS-EDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN 154 (402)
T ss_dssp CSSCEEEEEECTTC----TTEEEEEE-TTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS
T ss_pred CCCCEEEEEeCCCC----CCEEEEEe-CCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC
Confidence 788999999999 6 67777766 6999999999887 5677888999999999 99987 6999999999
Q ss_pred cEEEEeCCCCceeeEe--cCcc
Q psy14456 72 TVRFWDLRTRGCTNVL--TPIT 91 (93)
Q Consensus 72 ~i~~~d~~~~~~~~~~--~~~~ 91 (93)
.+.+||++++.....+ ..|.
T Consensus 155 ~i~iwd~~~~~~~~~~~~~~~~ 176 (402)
T 2aq5_A 155 VILVWDVGTGAAVLTLGPDVHP 176 (402)
T ss_dssp CEEEEETTTTEEEEEECTTTCC
T ss_pred EEEEEECCCCCccEEEecCCCC
Confidence 9999999999988888 4443
No 34
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.72 E-value=3.4e-16 Score=89.30 Aligned_cols=85 Identities=22% Similarity=0.408 Sum_probs=66.0
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC-------CceeEEeeccccceEEE-EecCCCEEEEecCCCcE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT-------GQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTV 73 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-------~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i 73 (93)
|++.|.+++|+|+ ++.+++++ .|+.|++|+.+. ...+..+.+|...|.++ |+|++.++++++.|+.+
T Consensus 57 h~~~v~~v~~sp~----~~~las~s-~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v 131 (330)
T 2hes_X 57 HKKAIRSVAWRPH----TSLLAAGS-FDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSV 131 (330)
T ss_dssp CCSCEEEEEECTT----SSEEEEEE-TTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCE
T ss_pred ccCCEEEEEECCC----CCEEEEEe-CCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEE
Confidence 8889999999998 77777776 699999999853 34567788999999999 99999999999999999
Q ss_pred EEEeCCCC----ceeeEecCcc
Q psy14456 74 RFWDLRTR----GCTNVLTPIT 91 (93)
Q Consensus 74 ~~~d~~~~----~~~~~~~~~~ 91 (93)
++||++.. .++..+..|.
T Consensus 132 ~iwd~~~~~~~~~~~~~~~~h~ 153 (330)
T 2hes_X 132 WIWETDESGEEYECISVLQEHS 153 (330)
T ss_dssp EEEECCTTCCCCEEEEEECCCS
T ss_pred EEEeccCCCCCeEEEEEeccCC
Confidence 99999532 4556666654
No 35
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.72 E-value=1.9e-16 Score=97.39 Aligned_cols=87 Identities=28% Similarity=0.358 Sum_probs=74.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC-----ceeEEeeccccceEEE-EecCCCEEEEecCCCcEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG-----QAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~-----~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~ 75 (93)
|++.|++++|+|++ .+.+++++ .|+.|++|++... .....+.+|...|.++ |++++..+++++.|+.|++
T Consensus 381 H~~~V~~v~~~~~~---~~~l~s~s-~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~v 456 (694)
T 3dm0_A 381 HTDMVTAIATPIDN---ADIIVSAS-RDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL 456 (694)
T ss_dssp CSSCEEEEECCTTC---CSEEEEEE-TTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred CCceeEEEEecCCC---CCEEEEEe-CCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEE
Confidence 89999999999873 45666665 6999999998753 3456788999999999 9999999999999999999
Q ss_pred EeCCCCceeeEecCccC
Q psy14456 76 WDLRTRGCTNVLTPITV 92 (93)
Q Consensus 76 ~d~~~~~~~~~~~~~~~ 92 (93)
||+.++...+.+..|..
T Consensus 457 wd~~~~~~~~~~~~h~~ 473 (694)
T 3dm0_A 457 WDLAAGVSTRRFVGHTK 473 (694)
T ss_dssp EETTTTEEEEEEECCSS
T ss_pred EECCCCcceeEEeCCCC
Confidence 99999999888887753
No 36
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.72 E-value=2.5e-16 Score=88.48 Aligned_cols=80 Identities=16% Similarity=0.299 Sum_probs=68.1
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEee--ccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCc
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALS--GHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRG 82 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~--~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~ 82 (93)
+.+++|+++ + ++++|. |+.|++||+.+++++..+. +|...|.++ |+++++++++++.|+.+++||+++++
T Consensus 28 ~~~l~WS~~-----~-~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~ 100 (318)
T 4ggc_A 28 LNLVDWSSG-----N-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK 100 (318)
T ss_dssp CBCEEECTT-----S-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred ceEEEECCC-----C-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCce
Confidence 367899975 3 455565 9999999999999877664 677789999 99999999999999999999999999
Q ss_pred eeeEecCccC
Q psy14456 83 CTNVLTPITV 92 (93)
Q Consensus 83 ~~~~~~~~~~ 92 (93)
+++.+..|..
T Consensus 101 ~~~~~~~h~~ 110 (318)
T 4ggc_A 101 RLRNMTSHSA 110 (318)
T ss_dssp EEEEEECCSS
T ss_pred eEEEecCccc
Confidence 9988887653
No 37
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.72 E-value=2.4e-16 Score=91.58 Aligned_cols=85 Identities=27% Similarity=0.370 Sum_probs=75.4
Q ss_pred CccceeEEEEEecCCCCc-ceEEEeeeCCCeEEEEeCCCCceeEEe--eccccceEEE-EecCCCEEEEecCCCcEEEEe
Q psy14456 2 HDGTVRDVCFIEDTSNKS-SLLISGGAGDCKIYVTDCATGQAFQAL--SGHSGHVLSL-YNWGGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~~~~~~~--~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d 77 (93)
|.+.|.+++|+|+ + ..+++++ .|+.|++||+++++.+..+ ..|...+.++ |++++..+++++.|+.+++||
T Consensus 130 h~~~v~~~~~~p~----~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 204 (402)
T 2aq5_A 130 HTKRVGIVAWHPT----AQNVLLSAG-CDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIE 204 (402)
T ss_dssp CSSCEEEEEECSS----BTTEEEEEE-TTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEE
T ss_pred CCCeEEEEEECcC----CCCEEEEEc-CCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEe
Confidence 7889999999998 5 5666665 6999999999999998888 7899999999 999999999999999999999
Q ss_pred CCCCceeeEe-cCcc
Q psy14456 78 LRTRGCTNVL-TPIT 91 (93)
Q Consensus 78 ~~~~~~~~~~-~~~~ 91 (93)
++++..+..+ ..|.
T Consensus 205 ~~~~~~~~~~~~~~~ 219 (402)
T 2aq5_A 205 PRKGTVVAEKDRPHE 219 (402)
T ss_dssp TTTTEEEEEEECSSC
T ss_pred CCCCceeeeeccCCC
Confidence 9999888887 4543
No 38
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.72 E-value=1.5e-16 Score=89.39 Aligned_cols=77 Identities=26% Similarity=0.352 Sum_probs=66.4
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|...+..+.|+|.+ ...++++|..|+.|++||+++++++..+.+|.+.|.++ |+|++.++++++.|+.|++||+..
T Consensus 239 ~~~~v~~~~~~~~~---~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 239 AHSQVCSILWSPHY---KELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp CSSCEEEEEEETTT---TEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred ceeeeeeeeecccc---cceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 45678899999983 33444555569999999999999999999999999999 999999999999999999999875
Q ss_pred C
Q psy14456 81 R 81 (93)
Q Consensus 81 ~ 81 (93)
.
T Consensus 316 ~ 316 (318)
T 4ggc_A 316 L 316 (318)
T ss_dssp C
T ss_pred C
Confidence 4
No 39
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.72 E-value=2.3e-16 Score=101.39 Aligned_cols=85 Identities=24% Similarity=0.417 Sum_probs=78.9
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|.+.|++++|+|+ ++.+++++ .|+.|++||..++..+..+.+|.+.|.++ |+|++.++++++.|+.+++||+.+
T Consensus 614 h~~~v~~~~~s~~----~~~l~s~~-~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~ 688 (1249)
T 3sfz_A 614 HTDAVYHACFSQD----GQRIASCG-ADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT 688 (1249)
T ss_dssp CSSCEEEEEECTT----SSEEEEEE-TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred ccccEEEEEECCC----CCEEEEEe-CCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCC
Confidence 7899999999999 78888877 69999999999999999999999999999 999999999999999999999999
Q ss_pred CceeeEecCcc
Q psy14456 81 RGCTNVLTPIT 91 (93)
Q Consensus 81 ~~~~~~~~~~~ 91 (93)
+..+..+..|.
T Consensus 689 ~~~~~~~~~~~ 699 (1249)
T 3sfz_A 689 GKLVHTYDEHS 699 (1249)
T ss_dssp CCEEEEEECCS
T ss_pred CceEEEEcCCC
Confidence 99988887764
No 40
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.71 E-value=4.2e-16 Score=90.65 Aligned_cols=79 Identities=41% Similarity=0.669 Sum_probs=71.8
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCce
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGC 83 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~ 83 (93)
.|.+++|+|+ ++.+++++ .|+.|++||+++++.+..+.+|...+.++ |++++..+++++.|+.+++||++++++
T Consensus 125 ~v~~v~~s~d----g~~l~s~~-~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~ 199 (393)
T 1erj_A 125 YIRSVCFSPD----GKFLATGA-EDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQC 199 (393)
T ss_dssp BEEEEEECTT----SSEEEEEE-TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred eEEEEEECCC----CCEEEEEc-CCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCee
Confidence 4899999998 78888776 69999999999999999999999999999 999999999999999999999999887
Q ss_pred eeEec
Q psy14456 84 TNVLT 88 (93)
Q Consensus 84 ~~~~~ 88 (93)
...+.
T Consensus 200 ~~~~~ 204 (393)
T 1erj_A 200 SLTLS 204 (393)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76654
No 41
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.71 E-value=1.1e-16 Score=93.13 Aligned_cols=85 Identities=16% Similarity=0.220 Sum_probs=67.2
Q ss_pred CccceeEEEEEecCCC----CcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCC-CEEEEecCCCcEEE
Q psy14456 2 HDGTVRDVCFIEDTSN----KSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGG-ATVLSGSHDRTVRF 75 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~----~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~-~~~~s~~~~~~i~~ 75 (93)
|++.|.+++|+|.... .++.+++++ .|+++++||++++..+..+..|.+.+.++ |+|++ ..+++++.|+.+++
T Consensus 135 H~~~v~~v~~~p~~~~~~~~d~~~las~s-~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~ 213 (393)
T 4gq1_A 135 HHNFVNDIDIADVYSADNRLAEQVIASVG-DDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRI 213 (393)
T ss_dssp CSSCEEEEEEEEEECTTCSEEEEEEEEEE-TTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEE
T ss_pred CCCceEEEEEccccccccCCCCCEEEEEE-CCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEE
Confidence 8899999999982100 156677766 69999999999888888888899999999 99976 57999999999999
Q ss_pred EeCCCCceeeEe
Q psy14456 76 WDLRTRGCTNVL 87 (93)
Q Consensus 76 ~d~~~~~~~~~~ 87 (93)
||+++++.....
T Consensus 214 wd~~t~~~~~~~ 225 (393)
T 4gq1_A 214 FDWTLNLSAEEN 225 (393)
T ss_dssp EETTCCC-----
T ss_pred EECCCCcccccc
Confidence 999987655443
No 42
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.71 E-value=3.7e-16 Score=96.86 Aligned_cols=85 Identities=11% Similarity=0.096 Sum_probs=78.4
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|++.|.+++|+|+ +..+++++ .++.|++||..++..+..+.+|...+.++ |+|++..+++++.|+.+.+||+.+
T Consensus 12 h~~~v~~i~~sp~----~~~la~~~-~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~ 86 (814)
T 3mkq_A 12 RSDRVKGIDFHPT----EPWVLTTL-YSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNT 86 (814)
T ss_dssp ECSCEEEEEECSS----SSEEEEEE-TTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTT
T ss_pred CCCceEEEEECCC----CCEEEEEe-CCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence 7889999999999 78888877 69999999999999999999999999999 999999999999999999999999
Q ss_pred CceeeEecCcc
Q psy14456 81 RGCTNVLTPIT 91 (93)
Q Consensus 81 ~~~~~~~~~~~ 91 (93)
+.....+..|.
T Consensus 87 ~~~~~~~~~~~ 97 (814)
T 3mkq_A 87 GEKVVDFEAHP 97 (814)
T ss_dssp CCEEEEEECCS
T ss_pred CcEEEEEecCC
Confidence 99888887664
No 43
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.71 E-value=3.5e-16 Score=90.67 Aligned_cols=84 Identities=27% Similarity=0.401 Sum_probs=72.3
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCC-CCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCA-TGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
|+..|.+++|.+.. +..+++++ .|+.|++||++ .+..+..+.+|.+.|.++ |+|++..+++++.|+.+++||++
T Consensus 204 h~~~v~~~~~~~~~---~~~l~sgs-~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~ 279 (380)
T 3iz6_a 204 HTADVLSLSINSLN---ANMFISGS-CDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMR 279 (380)
T ss_dssp CCSCEEEEEECSSS---CCEEEEEE-TTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETT
T ss_pred CccCeEEEEeecCC---CCEEEEEE-CCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECC
Confidence 67889999998742 56667665 69999999998 456778889999999999 99999999999999999999999
Q ss_pred CCceeeEecC
Q psy14456 80 TRGCTNVLTP 89 (93)
Q Consensus 80 ~~~~~~~~~~ 89 (93)
++..+..+..
T Consensus 280 ~~~~~~~~~~ 289 (380)
T 3iz6_a 280 TGHQLQVYNR 289 (380)
T ss_dssp TTEEEEEECC
T ss_pred CCcEEEEecc
Confidence 9988877754
No 44
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.71 E-value=1.5e-16 Score=91.66 Aligned_cols=84 Identities=18% Similarity=0.325 Sum_probs=65.1
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCcee----EEeeccccceEEE-EecCCCEEEEecCCCcEEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAF----QALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFW 76 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~----~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~ 76 (93)
|.+.|++++|+|+ +. +++++ .|+.|++||+.+++.. ....+|.+.|.++ |+|++..+++++.|+.|++|
T Consensus 93 ~~~~V~~~~~s~d----~~-~l~~s-~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iw 166 (357)
T 4g56_B 93 TEAGVTDVAWVSE----KG-ILVAS-DSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVW 166 (357)
T ss_dssp CSSCEEEEEEETT----TE-EEEEE-TTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred CCCCEEEEEEcCC----CC-EEEEE-CCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 5678999999998 55 45555 5999999999887643 2345789999999 99999999999999999999
Q ss_pred eCCCCceeeEecCcc
Q psy14456 77 DLRTRGCTNVLTPIT 91 (93)
Q Consensus 77 d~~~~~~~~~~~~~~ 91 (93)
|+++++++..+..|.
T Consensus 167 d~~~~~~~~~~~~h~ 181 (357)
T 4g56_B 167 DLSQKAVLKSYNAHS 181 (357)
T ss_dssp ETTTTEEEEEECCCS
T ss_pred ECCCCcEEEEEcCCC
Confidence 999999998888765
No 45
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.70 E-value=8.3e-16 Score=88.51 Aligned_cols=84 Identities=32% Similarity=0.441 Sum_probs=73.0
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|...|.+++|+|... +..+++++ .|+.+++||+++++++..+.+|...+.++ |+|++..+++++.|+.+++||+++
T Consensus 195 h~~~v~~~~~~~~~~--g~~l~sgs-~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~ 271 (354)
T 2pbi_B 195 HGADVLCLDLAPSET--GNTFVSGG-CDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRA 271 (354)
T ss_dssp CSSCEEEEEECCCSS--CCEEEEEE-TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CCCCeEEEEEEeCCC--CCEEEEEe-CCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence 778899999988521 45677766 69999999999999999999999999999 999999999999999999999998
Q ss_pred CceeeEec
Q psy14456 81 RGCTNVLT 88 (93)
Q Consensus 81 ~~~~~~~~ 88 (93)
+.....+.
T Consensus 272 ~~~~~~~~ 279 (354)
T 2pbi_B 272 DREVAIYS 279 (354)
T ss_dssp TEEEEEEC
T ss_pred CcEEEEEc
Confidence 87666554
No 46
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.70 E-value=2.8e-16 Score=90.59 Aligned_cols=81 Identities=25% Similarity=0.385 Sum_probs=72.0
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCC-CEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGG-ATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~-~~~~s~~~~~~i~~~d~~ 79 (93)
|++.|.+++|+|+ ++.+++++ .|+.|++||+++++++..+.+|...+.++ |++++ ..+++++.|+.+++||++
T Consensus 138 h~~~V~~v~~spd----g~~l~sgs-~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~ 212 (357)
T 4g56_B 138 HDDIVKTLSVFSD----GTQAVSGG-KDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTR 212 (357)
T ss_dssp CSSCEEEEEECSS----SSEEEEEE-TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTT
T ss_pred CCCCEEEEEECCC----CCEEEEEe-CCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECC
Confidence 7789999999998 78888876 69999999999999999999999999999 99976 478899999999999999
Q ss_pred CCceeeEe
Q psy14456 80 TRGCTNVL 87 (93)
Q Consensus 80 ~~~~~~~~ 87 (93)
+++....+
T Consensus 213 ~~~~~~~~ 220 (357)
T 4g56_B 213 KPKPATRI 220 (357)
T ss_dssp SSSCBCBC
T ss_pred CCceeeee
Confidence 88765544
No 47
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.70 E-value=7.2e-16 Score=89.69 Aligned_cols=85 Identities=28% Similarity=0.389 Sum_probs=72.6
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC------------ceeEEeeccccceEEE-EecCCCEEEEec
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG------------QAFQALSGHSGHVLSL-YNWGGATVLSGS 68 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~------------~~~~~~~~~~~~v~~~-~~~~~~~~~s~~ 68 (93)
|...|.+++|+|+ +..+++++ .|+.|++||++.. .+...+.+|...+.++ |++++.++++++
T Consensus 255 h~~~v~~v~~~~~----g~~l~s~s-~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs 329 (393)
T 1erj_A 255 HKDSVYSVVFTRD----GQSVVSGS-LDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGS 329 (393)
T ss_dssp CSSCEEEEEECTT----SSEEEEEE-TTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEE
T ss_pred CCCCEEEEEECCC----CCEEEEEe-CCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEe
Confidence 6788999999998 77888776 6999999998753 3456778899999999 999999999999
Q ss_pred CCCcEEEEeCCCCceeeEecCcc
Q psy14456 69 HDRTVRFWDLRTRGCTNVLTPIT 91 (93)
Q Consensus 69 ~~~~i~~~d~~~~~~~~~~~~~~ 91 (93)
.|+.+++||.+++..+..+.+|.
T Consensus 330 ~D~~v~iwd~~~~~~~~~l~~h~ 352 (393)
T 1erj_A 330 KDRGVLFWDKKSGNPLLMLQGHR 352 (393)
T ss_dssp TTSEEEEEETTTCCEEEEEECCS
T ss_pred CCCeEEEEECCCCeEEEEECCCC
Confidence 99999999999999988887764
No 48
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.70 E-value=2.7e-16 Score=89.95 Aligned_cols=84 Identities=21% Similarity=0.276 Sum_probs=72.4
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCC--CCceeEEeeccccceEEE-EecC--CCEEEEecCCCcEEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCA--TGQAFQALSGHSGHVLSL-YNWG--GATVLSGSHDRTVRFW 76 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~--~~~~~~~~~~~~~~v~~~-~~~~--~~~~~s~~~~~~i~~~ 76 (93)
|++.|++++|+|+ ++++++++ .|+.|++|++. +...+..+.+|...+.++ |+++ +..+++++.|+.+++|
T Consensus 10 h~~~v~~~~~s~~----~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw 84 (379)
T 3jrp_A 10 HNELIHDAVLDYY----GKRLATCS-SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 84 (379)
T ss_dssp CCCCEEEEEECSS----SSEEEEEE-TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred CcccEEEEEEcCC----CCEEEEEE-CCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEE
Confidence 8899999999998 78888876 59999999997 556677888999999999 9876 8999999999999999
Q ss_pred eCCCCc--eeeEecCc
Q psy14456 77 DLRTRG--CTNVLTPI 90 (93)
Q Consensus 77 d~~~~~--~~~~~~~~ 90 (93)
|++++. ....+..|
T Consensus 85 d~~~~~~~~~~~~~~~ 100 (379)
T 3jrp_A 85 KEENGRWSQIAVHAVH 100 (379)
T ss_dssp EEETTEEEEEEEECCC
T ss_pred EcCCCceeEeeeecCC
Confidence 999886 55655544
No 49
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.69 E-value=7.9e-16 Score=92.46 Aligned_cols=84 Identities=31% Similarity=0.487 Sum_probs=74.5
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|...|.+++|+|+ ++.+++++ .|+.|++|+. +++++..+.+|...|.++ |+|+++++++++.|+.|++||. +
T Consensus 466 ~~~~v~~~~~spd----~~~las~~-~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~ 538 (577)
T 2ymu_A 466 HSSSVRGVAFSPD----GQTIASAS-DDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-N 538 (577)
T ss_dssp CSSCEEEEEECTT----SCEEEEEE-TTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-T
T ss_pred CCCCEEEEEEcCC----CCEEEEEe-CCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-C
Confidence 7789999999998 78888776 6999999994 678888999999999999 9999999999999999999996 6
Q ss_pred CceeeEecCccC
Q psy14456 81 RGCTNVLTPITV 92 (93)
Q Consensus 81 ~~~~~~~~~~~~ 92 (93)
++++..+.+|..
T Consensus 539 ~~~~~~~~~h~~ 550 (577)
T 2ymu_A 539 GQLLQTLTGHSS 550 (577)
T ss_dssp SCEEEEEECCSS
T ss_pred CCEEEEEcCCCC
Confidence 788888887753
No 50
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.69 E-value=4.5e-16 Score=91.09 Aligned_cols=81 Identities=26% Similarity=0.312 Sum_probs=67.4
Q ss_pred ccceeEEEEEecCCCCcceEE-EeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLI-SGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
...+.++.|+|+ +..++ ++|..|+.|++||..+++++..+.+|.+.|.++ |+|++..++|++.|++|++||+..
T Consensus 320 ~~~v~~~~~~~~----~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 320 HSQVCSILWSPH----YKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp SSCEEEEEEETT----TTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred ccceeeeeecCC----CCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 356888999998 45544 455569999999999999999999999999999 999999999999999999999987
Q ss_pred CceeeEe
Q psy14456 81 RGCTNVL 87 (93)
Q Consensus 81 ~~~~~~~ 87 (93)
..+.+..
T Consensus 396 ~~~~~~~ 402 (420)
T 4gga_A 396 LDPARRR 402 (420)
T ss_dssp SSCC---
T ss_pred CCccchh
Confidence 6554443
No 51
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.69 E-value=7.8e-16 Score=88.26 Aligned_cols=85 Identities=22% Similarity=0.289 Sum_probs=70.9
Q ss_pred Ccc-ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeE---EeeccccceEEE-EecCCCEEEEecCCCcEEEE
Q psy14456 2 HDG-TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQ---ALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFW 76 (93)
Q Consensus 2 h~~-~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~---~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~ 76 (93)
|.+ .|.+++|+|+ ++++++++ .|+.|++|+...+.... ...+|...|.++ |+|++.++++++.|+.+++|
T Consensus 14 h~~~~v~~l~~sp~----g~~las~~-~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw 88 (345)
T 3fm0_A 14 HPDSRCWFLAWNPA----GTLLASCG-GDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIW 88 (345)
T ss_dssp STTSCEEEEEECTT----SSCEEEEE-TTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CCCCcEEEEEECCC----CCEEEEEc-CCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEE
Confidence 666 8999999999 78888877 59999999998775432 235799999999 99999999999999999999
Q ss_pred eCCCC--ceeeEecCcc
Q psy14456 77 DLRTR--GCTNVLTPIT 91 (93)
Q Consensus 77 d~~~~--~~~~~~~~~~ 91 (93)
|+.++ .+...+.+|.
T Consensus 89 ~~~~~~~~~~~~~~~h~ 105 (345)
T 3fm0_A 89 KKNQDDFECVTTLEGHE 105 (345)
T ss_dssp EECCC-EEEEEEECCCS
T ss_pred EccCCCeEEEEEccCCC
Confidence 98876 3566776664
No 52
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.69 E-value=2e-16 Score=91.66 Aligned_cols=74 Identities=22% Similarity=0.373 Sum_probs=68.9
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|++.|++++|+|+ ++++++++ .|+.|++||..+++....+..|...+.++ |+|++..+++++.|+.+++||+.+
T Consensus 65 H~~~V~~~~~sp~----~~~l~s~s-~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~ 139 (380)
T 3iz6_a 65 HSGKVYSLDWTPE----KNWIVSAS-QDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSS 139 (380)
T ss_dssp CSSCEEEEEECTT----SSCEEEEE-TTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCC
T ss_pred cccEEEEEEEcCC----CCEEEEEe-CCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCC
Confidence 8899999999998 78888876 69999999999999999999999999999 999999999999999999999865
No 53
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.69 E-value=9e-16 Score=87.77 Aligned_cols=85 Identities=8% Similarity=-0.022 Sum_probs=70.9
Q ss_pred CccceeEEEEEe--cCCCCcceEEEeeeCCCeEEEEeCCCCceeEEee-ccccceEEE-EecCCCEEEEecCCCcEEEEe
Q psy14456 2 HDGTVRDVCFIE--DTSNKSSLLISGGAGDCKIYVTDCATGQAFQALS-GHSGHVLSL-YNWGGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 2 h~~~v~~~~~~~--~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~-~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d 77 (93)
|.+.|.+++|+| + ++.+++++ .|+.+++||+++++.+.... .+...+.++ |+|++.++++++.|+.|++||
T Consensus 124 ~~~~v~~~~~~~~~~----~~~l~s~s-~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd 198 (343)
T 3lrv_A 124 SANEIIYMYGHNEVN----TEYFIWAD-NRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYN 198 (343)
T ss_dssp CSSCEEEEECCC-------CCEEEEEE-TTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEE
T ss_pred CCCCEEEEEcCCCCC----CCEEEEEe-CCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 457899999999 7 67777776 69999999999998876653 445578899 999999999999999999999
Q ss_pred CCCCcee-eEecC-cc
Q psy14456 78 LRTRGCT-NVLTP-IT 91 (93)
Q Consensus 78 ~~~~~~~-~~~~~-~~ 91 (93)
++++... ..+.. |.
T Consensus 199 ~~~~~~~~~~~~~~h~ 214 (343)
T 3lrv_A 199 LSSPDQASSRFPVDEE 214 (343)
T ss_dssp SSCTTSCCEECCCCTT
T ss_pred CCCCCCCccEEeccCC
Confidence 9998877 66765 54
No 54
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.68 E-value=1.6e-15 Score=86.37 Aligned_cols=83 Identities=25% Similarity=0.458 Sum_probs=69.3
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC-Ccee-EEeeccccceEEE-EecCCCEEEEecCCCcEEEEeC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT-GQAF-QALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~-~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~ 78 (93)
|.+.|++++|+|+..+ ++.+++++ .|+.|++|++++ +..+ ..+.+|...+.++ |++++..+++++.|+.+.+||+
T Consensus 38 h~~~v~~~~~~~~~~~-g~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~ 115 (368)
T 3mmy_A 38 PDDSIGCLSFSPPTLP-GNFLIAGS-WANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDL 115 (368)
T ss_dssp CSSCEEEEEECCTTSS-SEEEEEEE-TTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CCCceEEEEEcCCCCC-ceEEEEEC-CCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEc
Confidence 7899999999997100 15666655 699999999987 5554 6778899999999 9999999999999999999999
Q ss_pred CCCceeeE
Q psy14456 79 RTRGCTNV 86 (93)
Q Consensus 79 ~~~~~~~~ 86 (93)
+++.....
T Consensus 116 ~~~~~~~~ 123 (368)
T 3mmy_A 116 SSNQAIQI 123 (368)
T ss_dssp TTTEEEEE
T ss_pred CCCCceee
Confidence 98876654
No 55
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.68 E-value=5e-16 Score=87.62 Aligned_cols=85 Identities=20% Similarity=0.374 Sum_probs=68.7
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC-----------------------------------------
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG----------------------------------------- 40 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~----------------------------------------- 40 (93)
|.+.|++++|+|++......+++++ .|+.|++||++.+
T Consensus 213 h~~~i~~~~~~p~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (351)
T 3f3f_A 213 HKSLIRSISWAPSIGRWYQLIATGC-KDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQ 291 (351)
T ss_dssp CCSCEEEEEECCCSSCSSEEEEEEE-TTSCEEEEEEEECC---------------------------------------C
T ss_pred CCcceeEEEECCCCCCcceEEEEEc-CCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeec
Confidence 7789999999998310005666665 6999999998764
Q ss_pred -----ceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEe
Q psy14456 41 -----QAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVL 87 (93)
Q Consensus 41 -----~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~ 87 (93)
..+..+.+|...+.++ |++++.++++++.|+.+++||+.++..+..+
T Consensus 292 ~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 292 SNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp CSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred ccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 4566778899999999 9999999999999999999999987654444
No 56
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.67 E-value=1.5e-15 Score=93.44 Aligned_cols=85 Identities=26% Similarity=0.311 Sum_probs=73.2
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|...|.+++|+|++. ...+++++ .|+.|++||++.++....+.+|.+.+.++ |+|++.++++++.|+.|++||+++
T Consensus 516 h~~~v~~~~~~~~~~--~~~l~s~s-~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~ 592 (694)
T 3dm0_A 516 HRDWVSCVRFSPNTL--QPTIVSAS-WDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAE 592 (694)
T ss_dssp CSSCEEEEEECSCSS--SCEEEEEE-TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTT
T ss_pred CCCcEEEEEEeCCCC--cceEEEEe-CCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence 677899999999731 13556655 69999999999999999999999999999 999999999999999999999999
Q ss_pred CceeeEecC
Q psy14456 81 RGCTNVLTP 89 (93)
Q Consensus 81 ~~~~~~~~~ 89 (93)
+..+..+..
T Consensus 593 ~~~~~~~~~ 601 (694)
T 3dm0_A 593 GKKLYSLEA 601 (694)
T ss_dssp TEEEECCBC
T ss_pred CceEEEecC
Confidence 887766543
No 57
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.66 E-value=2.3e-15 Score=90.69 Aligned_cols=85 Identities=11% Similarity=0.133 Sum_probs=76.5
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeec-cccceEEE-Eec----------CCCEEEEecC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSG-HSGHVLSL-YNW----------GGATVLSGSH 69 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~-~~~~v~~~-~~~----------~~~~~~s~~~ 69 (93)
|...|++++|+|+ ++.+++++ .|+.+++|++.+++.+..+.+ |...+.++ |+| ++.++++++.
T Consensus 487 ~~~~v~~~~~s~~----g~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~ 561 (615)
T 1pgu_A 487 LRAKPSYISISPS----ETYIAAGD-VMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSL 561 (615)
T ss_dssp CSSCEEEEEECTT----SSEEEEEE-TTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEET
T ss_pred ccCceEEEEECCC----CCEEEEcC-CCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcC
Confidence 6789999999998 78888876 699999999999999888887 99999999 999 9999999999
Q ss_pred CCcEEEEeCCCC-ceeeEecCcc
Q psy14456 70 DRTVRFWDLRTR-GCTNVLTPIT 91 (93)
Q Consensus 70 ~~~i~~~d~~~~-~~~~~~~~~~ 91 (93)
|+.+++||++++ ..+..+..|.
T Consensus 562 dg~i~iw~~~~~~~~~~~~~~h~ 584 (615)
T 1pgu_A 562 DTNIFIYSVKRPMKIIKALNAHK 584 (615)
T ss_dssp TSCEEEEESSCTTCCEEETTSST
T ss_pred CCcEEEEECCCCceechhhhcCc
Confidence 999999999987 6777777664
No 58
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.66 E-value=4e-16 Score=91.70 Aligned_cols=85 Identities=16% Similarity=0.196 Sum_probs=69.6
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeE---EeeccccceEEE-EecCCCEEEEecCCCcEEEEe
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQ---ALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~---~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d 77 (93)
|.+.|++++|+|+ +..++++|+.|+.|++||++...... ...+|...|.++ |+|++.++++++.|+.|++||
T Consensus 249 h~~~v~~v~~~p~----~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd 324 (435)
T 4e54_B 249 HKKKVTHVALNPC----CDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYS 324 (435)
T ss_dssp CSSCEEEEEECTT----CSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEE
T ss_pred ccceEEeeeecCC----CceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEE
Confidence 7889999999998 45444444479999999998765433 335789999999 999999999999999999999
Q ss_pred CCCCceeeEecCc
Q psy14456 78 LRTRGCTNVLTPI 90 (93)
Q Consensus 78 ~~~~~~~~~~~~~ 90 (93)
++++.+...+..+
T Consensus 325 ~~~~~~~~~~~~~ 337 (435)
T 4e54_B 325 ASQWDCPLGLIPH 337 (435)
T ss_dssp SSSSSSEEEECCC
T ss_pred CCCCccceEEecc
Confidence 9998877666544
No 59
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.66 E-value=5.8e-15 Score=83.58 Aligned_cols=86 Identities=24% Similarity=0.279 Sum_probs=73.5
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|...+.+++|++++. ...+++++ .|+.+++||+++++.+..+.+|.+.|.++ |+|++.++++++.|+.+++||+++
T Consensus 170 ~~~~v~~~~~~~~~~--~~~~~s~~-~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~ 246 (340)
T 4aow_A 170 HSEWVSCVRFSPNSS--NPIIVSCG-WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNE 246 (340)
T ss_dssp CSSCEEEEEECSCSS--SCEEEEEE-TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTT
T ss_pred ccCcccceEEccCCC--CcEEEEEc-CCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEecc
Confidence 677899999988741 23445544 69999999999999999999999999999 999999999999999999999999
Q ss_pred CceeeEecCc
Q psy14456 81 RGCTNVLTPI 90 (93)
Q Consensus 81 ~~~~~~~~~~ 90 (93)
...+..+..+
T Consensus 247 ~~~~~~~~~~ 256 (340)
T 4aow_A 247 GKHLYTLDGG 256 (340)
T ss_dssp TEEEEEEECS
T ss_pred CceeeeecCC
Confidence 9888777543
No 60
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.66 E-value=4.5e-15 Score=85.66 Aligned_cols=81 Identities=32% Similarity=0.482 Sum_probs=74.7
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCC---CeEEEEeCCCCceeEEeec-------------cccceEEE-EecCCCEEE
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGD---CKIYVTDCATGQAFQALSG-------------HSGHVLSL-YNWGGATVL 65 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~---~~v~~~~~~~~~~~~~~~~-------------~~~~v~~~-~~~~~~~~~ 65 (93)
...|.+++|+|+ +..+++++ .+ +.|++||+++++.+..+.+ |...+.++ |++++.+++
T Consensus 233 ~~~i~~i~~~~~----~~~l~~~~-~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 307 (397)
T 1sq9_A 233 SNSIRSVKFSPQ----GSLLAIAH-DSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLC 307 (397)
T ss_dssp CCCEEEEEECSS----TTEEEEEE-EETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEE
T ss_pred CCccceEEECCC----CCEEEEEe-cCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEE
Confidence 789999999998 77888776 48 9999999999999988888 99999999 999999999
Q ss_pred EecCCCcEEEEeCCCCceeeEec
Q psy14456 66 SGSHDRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 66 s~~~~~~i~~~d~~~~~~~~~~~ 88 (93)
+++.|+.+.+||+++++.+..+.
T Consensus 308 ~~~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 308 SAGWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp EEETTSEEEEEETTTTEEEEEEE
T ss_pred EEeCCCeEEEEEcCCCceeEEEe
Confidence 99999999999999999888887
No 61
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.66 E-value=1.3e-15 Score=87.16 Aligned_cols=80 Identities=19% Similarity=0.134 Sum_probs=68.3
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCcee-EEeec-cccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAF-QALSG-HSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~-~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
...|.+++|+|+ +..+++++ .|+.|++||+++++.+ ..+.. |.+.+.++ |+|++..+++++ ++.+++||++
T Consensus 170 ~~~i~~~~~~pd----g~~lasg~-~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~ 243 (343)
T 3lrv_A 170 DVEYSSGVLHKD----SLLLALYS-PDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLR 243 (343)
T ss_dssp SCCCCEEEECTT----SCEEEEEC-TTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETT
T ss_pred CCceEEEEECCC----CCEEEEEc-CCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcC
Confidence 457999999998 67777766 6999999999999887 77887 99999999 999999999999 4499999999
Q ss_pred CCceeeEec
Q psy14456 80 TRGCTNVLT 88 (93)
Q Consensus 80 ~~~~~~~~~ 88 (93)
++.....+.
T Consensus 244 ~~~~~~~~~ 252 (343)
T 3lrv_A 244 KDVGTLAYP 252 (343)
T ss_dssp SSTTCBSSC
T ss_pred CCCcceeec
Confidence 887654443
No 62
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.65 E-value=8.9e-15 Score=81.93 Aligned_cols=83 Identities=29% Similarity=0.485 Sum_probs=73.7
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|...|.+++|+|+ +. +++++ .++.+++||+++++.+..+.+|...+.++ |++++ .+++++.|+.+.+||+++
T Consensus 183 ~~~~i~~~~~~~~----~~-~~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~ 255 (313)
T 3odt_A 183 HNDVVRHLAVVDD----GH-FISCS-NDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKEN 255 (313)
T ss_dssp CSSCEEEEEEEET----TE-EEEEE-TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTT
T ss_pred CcccEEEEEEcCC----Ce-EEEcc-CCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCC
Confidence 6788999999998 55 66665 69999999999999999999999999999 99988 588999999999999999
Q ss_pred CceeeEecCcc
Q psy14456 81 RGCTNVLTPIT 91 (93)
Q Consensus 81 ~~~~~~~~~~~ 91 (93)
++....+..+.
T Consensus 256 ~~~~~~~~~~~ 266 (313)
T 3odt_A 256 GSLKQVITLPA 266 (313)
T ss_dssp CCEEEEEECSS
T ss_pred CceeEEEeccC
Confidence 99888887654
No 63
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.65 E-value=4.6e-15 Score=86.81 Aligned_cols=80 Identities=16% Similarity=0.299 Sum_probs=67.9
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEee--ccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCc
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALS--GHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRG 82 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~--~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~ 82 (93)
+..++|+++ + +++.|. |+.|++||..++++...+. +|...|.++ |++++.++++|+.|+.+.+||+++++
T Consensus 108 ~~~l~wS~~-----n-~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~ 180 (420)
T 4gga_A 108 LNLVDWSSG-----N-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK 180 (420)
T ss_dssp CBCEEECTT-----S-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred ceeEEECCC-----C-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCc
Confidence 467899864 3 556675 9999999999998876554 677789999 99999999999999999999999999
Q ss_pred eeeEecCccC
Q psy14456 83 CTNVLTPITV 92 (93)
Q Consensus 83 ~~~~~~~~~~ 92 (93)
.++.+..|..
T Consensus 181 ~~~~~~~h~~ 190 (420)
T 4gga_A 181 RLRNMTSHSA 190 (420)
T ss_dssp EEEEECCCSS
T ss_pred EEEEEeCCCC
Confidence 9998887753
No 64
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.65 E-value=2.9e-15 Score=88.53 Aligned_cols=81 Identities=19% Similarity=0.112 Sum_probs=68.2
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|.+.|.+++|+|+. +..+++++ .|+.|++||++++.......+|...+.++ |++++..+++++.|+.+.+||.+
T Consensus 148 h~~~V~~v~~~p~~---~~~las~s-~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~- 222 (434)
T 2oit_A 148 AGGMVIDMKWNPTV---PSMVAVCL-ADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT- 222 (434)
T ss_dssp GGGSEEEEEECSSC---TTEEEEEE-TTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-
T ss_pred CCCceEEEEECCCC---CCEEEEEE-CCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-
Confidence 78899999999973 45666655 69999999999887776667788999999 99999999999999999999998
Q ss_pred CceeeEe
Q psy14456 81 RGCTNVL 87 (93)
Q Consensus 81 ~~~~~~~ 87 (93)
+.....+
T Consensus 223 ~~~~~~~ 229 (434)
T 2oit_A 223 LQEKKVI 229 (434)
T ss_dssp CCEEEEE
T ss_pred Ccccccc
Confidence 5444444
No 65
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.65 E-value=4.3e-15 Score=84.64 Aligned_cols=83 Identities=31% Similarity=0.509 Sum_probs=72.1
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-E--ecCCCEEEEecCCCcEEEEeC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-Y--NWGGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~--~~~~~~~~s~~~~~~i~~~d~ 78 (93)
|.+.|.+++|+|+ ++.+++++ .|+.|++||+++++.+. +..|...+.++ | ++++..+++++.|+.+++||+
T Consensus 85 h~~~v~~~~~~~~----~~~l~s~~-~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~ 158 (368)
T 3mmy_A 85 HTGPVLDVCWSDD----GSKVFTAS-CDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDT 158 (368)
T ss_dssp CSSCEEEEEECTT----SSEEEEEE-TTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECS
T ss_pred ccCCEEEEEECcC----CCEEEEEc-CCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEEC
Confidence 7889999999998 78888776 69999999999888766 55699999999 9 778889999999999999999
Q ss_pred CCCceeeEecCc
Q psy14456 79 RTRGCTNVLTPI 90 (93)
Q Consensus 79 ~~~~~~~~~~~~ 90 (93)
++++.+..+..+
T Consensus 159 ~~~~~~~~~~~~ 170 (368)
T 3mmy_A 159 RSSNPMMVLQLP 170 (368)
T ss_dssp SCSSCSEEEECS
T ss_pred CCCcEEEEEecC
Confidence 998877776543
No 66
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.65 E-value=7.2e-15 Score=84.05 Aligned_cols=85 Identities=26% Similarity=0.263 Sum_probs=74.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeC------------------CCCceeEEeeccccceEEE-EecCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDC------------------ATGQAFQALSGHSGHVLSL-YNWGGA 62 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~------------------~~~~~~~~~~~~~~~v~~~-~~~~~~ 62 (93)
|...|.+++|+|+ ++.+++++ .|+.+++||+ ..+..+..+.+|...+.++ |++++.
T Consensus 141 ~~~~i~~~~~~~~----~~~l~~~~-~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 215 (372)
T 1k8k_C 141 IRSTVLSLDWHPN----SVLLAAGS-CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGS 215 (372)
T ss_dssp CCSCEEEEEECTT----SSEEEEEE-TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSS
T ss_pred cCCCeeEEEEcCC----CCEEEEEc-CCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCC
Confidence 6788999999998 67777776 6999999995 3567788888899999999 999999
Q ss_pred EEEEecCCCcEEEEeCCCCceeeEecCcc
Q psy14456 63 TVLSGSHDRTVRFWDLRTRGCTNVLTPIT 91 (93)
Q Consensus 63 ~~~s~~~~~~i~~~d~~~~~~~~~~~~~~ 91 (93)
.+++++.|+.+.+||+++++.+..+..+.
T Consensus 216 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 244 (372)
T 1k8k_C 216 RVAWVSHDSTVCLADADKKMAVATLASET 244 (372)
T ss_dssp EEEEEETTTEEEEEEGGGTTEEEEEECSS
T ss_pred EEEEEeCCCEEEEEECCCCceeEEEccCC
Confidence 99999999999999999999888887664
No 67
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.65 E-value=2.6e-15 Score=85.91 Aligned_cols=81 Identities=12% Similarity=0.250 Sum_probs=71.7
Q ss_pred CCccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCc--eeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEe
Q psy14456 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQ--AFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 1 ~h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~--~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d 77 (93)
.|+++|.+++|+|+ ++.+++++ .++.|++|++.+++ .+..+.+|...+.++ |++++..+++++.|+.+.+||
T Consensus 6 ~~~~~i~~~~~s~~----~~~l~~~~-~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 80 (372)
T 1k8k_C 6 FLVEPISCHAWNKD----RTQIAICP-NNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWT 80 (372)
T ss_dssp SCSSCCCEEEECTT----SSEEEEEC-SSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred ccCCCeEEEEECCC----CCEEEEEe-CCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEE
Confidence 47899999999998 78888776 59999999999887 788888999999999 999999999999999999999
Q ss_pred CCCCceeeE
Q psy14456 78 LRTRGCTNV 86 (93)
Q Consensus 78 ~~~~~~~~~ 86 (93)
+++++....
T Consensus 81 ~~~~~~~~~ 89 (372)
T 1k8k_C 81 LKGRTWKPT 89 (372)
T ss_dssp EETTEEEEE
T ss_pred CCCCeeeee
Confidence 988764443
No 68
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.65 E-value=1.4e-16 Score=91.60 Aligned_cols=84 Identities=14% Similarity=0.198 Sum_probs=67.1
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC--ceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG--QAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~ 78 (93)
|.++|++++|+|+ ++++++++ .|+.|++|++.++ ..+..+.+|...+.++ |++++.++++++.|+.+++||+
T Consensus 10 ~~~~v~~~~~s~~----g~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~ 84 (377)
T 3dwl_C 10 LPKPSYEHAFNSQ----RTEFVTTT-ATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEK 84 (377)
T ss_dssp CSSCCSCCEECSS----SSEEECCC-SSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC--
T ss_pred CCCcEEEEEECCC----CCEEEEec-CCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEc
Confidence 4678999999998 77777766 5999999999988 6777888999999999 9999999999999999999999
Q ss_pred CCCc---eeeEecCc
Q psy14456 79 RTRG---CTNVLTPI 90 (93)
Q Consensus 79 ~~~~---~~~~~~~~ 90 (93)
+++. ....+..|
T Consensus 85 ~~~~~~~~~~~~~~~ 99 (377)
T 3dwl_C 85 RPDGTWKQTLVLLRL 99 (377)
T ss_dssp ----CCCCEEECCCC
T ss_pred CCCCceeeeeEeccc
Confidence 9876 45544444
No 69
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.64 E-value=8.5e-15 Score=90.85 Aligned_cols=85 Identities=26% Similarity=0.384 Sum_probs=76.0
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|.++|.+++|+|+ ++.+++++ .|+.|++|+..+++.+..+.+|...+.++ |+|++..+++++.|+.+.+||+++
T Consensus 54 ~~~~v~~~~~s~~----~~~l~~~~-~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~ 128 (814)
T 3mkq_A 54 TETPVRAGKFIAR----KNWIIVGS-DDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWEN 128 (814)
T ss_dssp CSSCEEEEEEEGG----GTEEEEEE-TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGG
T ss_pred CCCcEEEEEEeCC----CCEEEEEe-CCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCC
Confidence 7889999999999 78888877 59999999999999999999999999999 999999999999999999999998
Q ss_pred C-ceeeEecCcc
Q psy14456 81 R-GCTNVLTPIT 91 (93)
Q Consensus 81 ~-~~~~~~~~~~ 91 (93)
+ .....+..|.
T Consensus 129 ~~~~~~~~~~~~ 140 (814)
T 3mkq_A 129 NWALEQTFEGHE 140 (814)
T ss_dssp TSEEEEEEECCS
T ss_pred CceEEEEEcCCC
Confidence 7 5566665553
No 70
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.64 E-value=3.5e-15 Score=84.89 Aligned_cols=86 Identities=12% Similarity=0.096 Sum_probs=71.6
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeC---CCeEEEEeCCCCceeEEe-eccccceEEE-EecC---CCEEEEecCCCcE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAG---DCKIYVTDCATGQAFQAL-SGHSGHVLSL-YNWG---GATVLSGSHDRTV 73 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~---~~~v~~~~~~~~~~~~~~-~~~~~~v~~~-~~~~---~~~~~s~~~~~~i 73 (93)
|.+.|.+++|+|+ +..++++|+. |+.|++|++.+++..... .+|...+.++ |+++ +..+++++.|+.+
T Consensus 17 h~~~v~~~~~~p~----~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i 92 (357)
T 3i2n_A 17 FNYTVFDCKWVPC----SAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNL 92 (357)
T ss_dssp CSSCEEEEEECTT----SSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCE
T ss_pred CCCceEEEEEcCC----CceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeE
Confidence 7889999999998 6666666655 899999999988765433 3788999999 9997 6999999999999
Q ss_pred EEEeCCCCc-eeeEecCcc
Q psy14456 74 RFWDLRTRG-CTNVLTPIT 91 (93)
Q Consensus 74 ~~~d~~~~~-~~~~~~~~~ 91 (93)
.+||++++. ....+..|.
T Consensus 93 ~iwd~~~~~~~~~~~~~~~ 111 (357)
T 3i2n_A 93 HIWNLEAPEMPVYSVKGHK 111 (357)
T ss_dssp EEECTTSCSSCSEEECCCS
T ss_pred EEEeCCCCCccEEEEEecc
Confidence 999999887 777777664
No 71
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.63 E-value=1.6e-14 Score=83.60 Aligned_cols=83 Identities=14% Similarity=0.295 Sum_probs=73.2
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|.+.|++++|+|+ ++.+++++ .++.|++|+ .++..+..+..|...+.++ |++++..+++++.|+.+.+||+++
T Consensus 107 ~~~~v~~~~~s~~----~~~l~~~~-~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 180 (425)
T 1r5m_A 107 TTNQVTCLAWSHD----GNSIVTGV-ENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVIS 180 (425)
T ss_dssp -CBCEEEEEECTT----SSEEEEEE-TTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTT
T ss_pred CCCceEEEEEcCC----CCEEEEEe-CCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCC
Confidence 5679999999998 78888876 599999999 6777888888999999999 999999999999999999999999
Q ss_pred CceeeEecCc
Q psy14456 81 RGCTNVLTPI 90 (93)
Q Consensus 81 ~~~~~~~~~~ 90 (93)
+.....+..+
T Consensus 181 ~~~~~~~~~~ 190 (425)
T 1r5m_A 181 GTVMQHFELK 190 (425)
T ss_dssp TEEEEEECCC
T ss_pred CcEEEEeecc
Confidence 9888777654
No 72
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.63 E-value=2.5e-14 Score=80.70 Aligned_cols=85 Identities=20% Similarity=0.291 Sum_probs=73.7
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCc--eeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQ--AFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~--~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~ 78 (93)
|...|.+++|+|+ ++.+++++ .++.+++|+++.+. ....+..|...+.++ |++++..+++++.|+.+.+||+
T Consensus 96 ~~~~v~~~~~~~~----~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~ 170 (337)
T 1gxr_A 96 RDNYIRSCKLLPD----GCTLIVGG-EASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL 170 (337)
T ss_dssp TTSBEEEEEECTT----SSEEEEEE-SSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCCcEEEEEEcCC----CCEEEEEc-CCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence 5678999999998 77788776 59999999999876 556777899999999 9999999999999999999999
Q ss_pred CCCceeeEecCcc
Q psy14456 79 RTRGCTNVLTPIT 91 (93)
Q Consensus 79 ~~~~~~~~~~~~~ 91 (93)
++++....+..|.
T Consensus 171 ~~~~~~~~~~~~~ 183 (337)
T 1gxr_A 171 HNQTLVRQFQGHT 183 (337)
T ss_dssp TTTEEEEEECCCS
T ss_pred CCCceeeeeeccc
Confidence 9998888887654
No 73
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.63 E-value=1.2e-15 Score=87.66 Aligned_cols=84 Identities=17% Similarity=0.169 Sum_probs=69.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCC------------------CCceeEEeeccccceEEE-EecCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCA------------------TGQAFQALSGHSGHVLSL-YNWGGA 62 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~------------------~~~~~~~~~~~~~~v~~~-~~~~~~ 62 (93)
|.+.|.+++|+|+ ++.+++++ .|+.+++||++ .+.++..+ +|...+.++ |+|++.
T Consensus 145 h~~~v~~~~~~~~----~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~ 218 (377)
T 3dwl_C 145 LRSTILSLDWHPN----NVLLAAGC-ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGN 218 (377)
T ss_dssp CCSCEEEEEECTT----SSEEEEEE-SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSS
T ss_pred cCCCeEEEEEcCC----CCEEEEEe-CCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCC
Confidence 7889999999998 77777776 69999999985 24455566 899999999 999999
Q ss_pred EEEEecCCCcEEEEeCCCCce----eeEecCcc
Q psy14456 63 TVLSGSHDRTVRFWDLRTRGC----TNVLTPIT 91 (93)
Q Consensus 63 ~~~s~~~~~~i~~~d~~~~~~----~~~~~~~~ 91 (93)
++++++.|+.+++||++++.. +..+..|.
T Consensus 219 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 251 (377)
T 3dwl_C 219 ALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQ 251 (377)
T ss_dssp CEEEEETTTEEC-CEECSTTSCEEECCCEECSS
T ss_pred EEEEEeCCCcEEEEECCCCCCcceeeEeecCCC
Confidence 999999999999999999876 66665553
No 74
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.63 E-value=5.4e-15 Score=85.30 Aligned_cols=82 Identities=13% Similarity=0.193 Sum_probs=69.7
Q ss_pred CccceeEEEEEecCCCCcc-eEEEeeeCCCeEEEEeCCC----CceeEEeeccccceEEE-Eec-CCCEEEEecCCCcEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSS-LLISGGAGDCKIYVTDCAT----GQAFQALSGHSGHVLSL-YNW-GGATVLSGSHDRTVR 74 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~-~~~~~g~~~~~v~~~~~~~----~~~~~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~ 74 (93)
|.+.|.+++|+|+ ++ .+++++ .|+.|++||+++ +..+..+ +|...+.++ |++ ++..+++++.|+.+.
T Consensus 203 h~~~v~~~~~~~~----~~~~l~s~~-~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~ 276 (383)
T 3ei3_B 203 HKAKVTHAEFNPR----CDWLMATSS-VDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIR 276 (383)
T ss_dssp SSSCEEEEEECSS----CTTEEEEEE-TTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEE
T ss_pred CCCcEEEEEECCC----CCCEEEEEe-CCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEE
Confidence 7889999999998 56 666665 699999999987 5555555 689999999 999 999999999999999
Q ss_pred EEeCCCCceeeEecC
Q psy14456 75 FWDLRTRGCTNVLTP 89 (93)
Q Consensus 75 ~~d~~~~~~~~~~~~ 89 (93)
+||++++.....+..
T Consensus 277 iwd~~~~~~~~~~~~ 291 (383)
T 3ei3_B 277 VYSSYDWSKPDQIII 291 (383)
T ss_dssp EEETTBTTSCSEEEE
T ss_pred EEECCCCcccccccc
Confidence 999998877666653
No 75
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.63 E-value=2.1e-14 Score=80.45 Aligned_cols=83 Identities=22% Similarity=0.127 Sum_probs=71.0
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|.+.|.+++| |+ ++.+++++ .|+.|++||+.++.....+..|...+.++ |++++..+++++.|+.+.+|++..
T Consensus 17 h~~~v~~~~~-~~----~~~l~s~~-~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~ 90 (313)
T 3odt_A 17 HDQDVRDVVA-VD----DSKVASVS-RDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFA 90 (313)
T ss_dssp CSSCEEEEEE-EE----TTEEEEEE-TTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTC
T ss_pred CCCCcEEEEe-cC----CCEEEEEE-cCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeee
Confidence 7899999999 77 67777776 69999999999998888888999999999 999999999999999999999876
Q ss_pred C---ceeeEecCc
Q psy14456 81 R---GCTNVLTPI 90 (93)
Q Consensus 81 ~---~~~~~~~~~ 90 (93)
. .....+..|
T Consensus 91 ~~~~~~~~~~~~~ 103 (313)
T 3odt_A 91 TSGEDPLYTLIGH 103 (313)
T ss_dssp CTTSCC-CEECCC
T ss_pred cCCCCcccchhhc
Confidence 4 345555444
No 76
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.63 E-value=2.1e-14 Score=83.07 Aligned_cols=86 Identities=13% Similarity=0.263 Sum_probs=71.2
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCC----eEEEEeCCCCce----eEEeeccccceEEE-EecCCCEEEEecCCCc
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDC----KIYVTDCATGQA----FQALSGHSGHVLSL-YNWGGATVLSGSHDRT 72 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~----~v~~~~~~~~~~----~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~ 72 (93)
|...|.+++|+|+ +..+++++. ++ .++.|+...... ...+.+|...|.++ |+|++.++++++.|+.
T Consensus 218 ~~~~v~~v~fspd----g~~l~~~s~-d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~ 292 (365)
T 4h5i_A 218 KNWSLSKINFIAD----DTVLIAASL-KKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNS 292 (365)
T ss_dssp TTEEEEEEEEEET----TEEEEEEEE-SSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSC
T ss_pred CCCCEEEEEEcCC----CCEEEEEec-CCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCE
Confidence 6778999999999 777777664 55 688888766543 34567889999999 9999999999999999
Q ss_pred EEEEeCCCCceeeEe-cCccC
Q psy14456 73 VRFWDLRTRGCTNVL-TPITV 92 (93)
Q Consensus 73 i~~~d~~~~~~~~~~-~~~~~ 92 (93)
|++||++++++++.+ .+|..
T Consensus 293 V~iwd~~~~~~~~~~~~gH~~ 313 (365)
T 4h5i_A 293 IALVKLKDLSMSKIFKQAHSF 313 (365)
T ss_dssp EEEEETTTTEEEEEETTSSSS
T ss_pred EEEEECCCCcEEEEecCcccC
Confidence 999999999998876 56754
No 77
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.63 E-value=1.5e-14 Score=93.16 Aligned_cols=86 Identities=27% Similarity=0.418 Sum_probs=77.6
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-Eec--CCCEEEEecCCCcEEEEeC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNW--GGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~--~~~~~~s~~~~~~i~~~d~ 78 (93)
|.+.|.+++|+|+ ++++++++ .|+.|++||+.+++.+..+.+|...+.++ |++ +...+++++.|+.+.+||+
T Consensus 656 h~~~v~~~~~s~~----~~~l~s~~-~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~ 730 (1249)
T 3sfz_A 656 HEDEVLCCAFSSD----DSYIATCS-ADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDL 730 (1249)
T ss_dssp CSSCEEEEEECTT----SSEEEEEE-TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEET
T ss_pred CCCCEEEEEEecC----CCEEEEEe-CCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEEC
Confidence 7889999999998 78888877 59999999999999999999999999999 998 5668999999999999999
Q ss_pred CCCceeeEecCccC
Q psy14456 79 RTRGCTNVLTPITV 92 (93)
Q Consensus 79 ~~~~~~~~~~~~~~ 92 (93)
+++.+...+.+|..
T Consensus 731 ~~~~~~~~~~~h~~ 744 (1249)
T 3sfz_A 731 NQKECRNTMFGHTN 744 (1249)
T ss_dssp TSSSEEEEECCCSS
T ss_pred CCcchhheecCCCC
Confidence 99999888877653
No 78
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.63 E-value=1.4e-14 Score=85.46 Aligned_cols=84 Identities=23% Similarity=0.330 Sum_probs=71.2
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEE-eeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQA-LSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~-~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
|.+.|.+++|+|+.. .+..+++++ .|+.|++||++++..+.. +.+|...+.++ |+ ++.++++++.|+.|++||++
T Consensus 194 h~~~v~~~~~sp~~~-~~~~l~s~~-~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~ 270 (450)
T 2vdu_B 194 HVSMLTDVHLIKDSD-GHQFIITSD-RDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWK 270 (450)
T ss_dssp CSSCEEEEEEEECTT-SCEEEEEEE-TTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETT
T ss_pred ccCceEEEEEcCCCC-CCcEEEEEc-CCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECC
Confidence 678999999999710 034566655 699999999999988877 56899999999 99 99999999999999999999
Q ss_pred CCceeeEec
Q psy14456 80 TRGCTNVLT 88 (93)
Q Consensus 80 ~~~~~~~~~ 88 (93)
+++++..+.
T Consensus 271 ~~~~~~~~~ 279 (450)
T 2vdu_B 271 TGKNLSTFD 279 (450)
T ss_dssp TCCEEEEEE
T ss_pred CCcEeeeec
Confidence 998887775
No 79
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.62 E-value=2.9e-15 Score=93.20 Aligned_cols=85 Identities=21% Similarity=0.278 Sum_probs=73.1
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCC--CCceeEEeeccccceEEE-EecC--CCEEEEecCCCcEEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCA--TGQAFQALSGHSGHVLSL-YNWG--GATVLSGSHDRTVRFW 76 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~--~~~~~~~~~~~~~~v~~~-~~~~--~~~~~s~~~~~~i~~~ 76 (93)
|++.|++++|+|+ ++.+++++ .||.|++|++. ++..+..+.+|.+.|.++ |+++ +..+++++.|+.+++|
T Consensus 8 H~~~V~~l~~s~d----g~~latg~-~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 8 HNELIHDAVLDYY----GKRLATCS-SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp CCCCEEEECCCSS----SCCEEEEE-TTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred CcceeEEEEECCC----CCeEEEEE-CCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 8899999999998 77888877 59999999987 456677888999999999 9887 8999999999999999
Q ss_pred eCCCCc--eeeEecCcc
Q psy14456 77 DLRTRG--CTNVLTPIT 91 (93)
Q Consensus 77 d~~~~~--~~~~~~~~~ 91 (93)
|++++. ....+..|.
T Consensus 83 d~~~~~~~~~~~~~~h~ 99 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHS 99 (753)
T ss_dssp EEETTEEEEEEEECCCS
T ss_pred ECCCCcccccccccCCC
Confidence 999886 555555543
No 80
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.62 E-value=1e-14 Score=85.33 Aligned_cols=84 Identities=19% Similarity=0.337 Sum_probs=73.2
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEee-ccccceEEE-Eec----CCCEEEEecCCCcEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALS-GHSGHVLSL-YNW----GGATVLSGSHDRTVRF 75 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~-~~~~~v~~~-~~~----~~~~~~s~~~~~~i~~ 75 (93)
|.+.|++++|+|+ +..+++++ .|+.|++||++.+.++..+. .|...+.++ ++| ++..+++++.|+.+++
T Consensus 213 h~~~v~~~~~s~~----~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~i 287 (437)
T 3gre_A 213 RHGAVSSICIDEE----CCVLILGT-TRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTI 287 (437)
T ss_dssp GGCCEEEEEECTT----SCEEEEEE-TTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEE
T ss_pred CCCceEEEEECCC----CCEEEEEc-CCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEE
Confidence 7789999999998 77788776 69999999999999888875 778888888 876 3668999999999999
Q ss_pred EeCCCCceeeEecCc
Q psy14456 76 WDLRTRGCTNVLTPI 90 (93)
Q Consensus 76 ~d~~~~~~~~~~~~~ 90 (93)
||++++.+++.+..+
T Consensus 288 wd~~~~~~~~~~~~~ 302 (437)
T 3gre_A 288 WNFVKGHCQYAFINS 302 (437)
T ss_dssp EETTTTEEEEEEESS
T ss_pred EEcCCCcEEEEEEcC
Confidence 999999998888765
No 81
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.62 E-value=9.3e-15 Score=83.27 Aligned_cols=79 Identities=24% Similarity=0.471 Sum_probs=69.9
Q ss_pred CccceeEEEEEe-cCCCCcceEEEeeeCCCeEEEEeCCCCceeEEe---eccccceEEE-EecCCCEEEEecCCCcEEEE
Q psy14456 2 HDGTVRDVCFIE-DTSNKSSLLISGGAGDCKIYVTDCATGQAFQAL---SGHSGHVLSL-YNWGGATVLSGSHDRTVRFW 76 (93)
Q Consensus 2 h~~~v~~~~~~~-~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~---~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~ 76 (93)
|.+.|.+++|+| + +..+++++ .|+.|++||+++++.+..+ .+|...+.++ |++++..+++++.|+.+.+|
T Consensus 114 ~~~~i~~~~~~~~~----~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~ 188 (366)
T 3k26_A 114 HGNAINELKFHPRD----PNLLLSVS-KDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 188 (366)
T ss_dssp CCSCEEEEEECSSC----TTEEEEEE-TTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CCCcEEEEEECCCC----CCEEEEEe-CCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEE
Confidence 788999999999 5 67777766 6999999999999888887 6899999999 99999999999999999999
Q ss_pred eCCCCceee
Q psy14456 77 DLRTRGCTN 85 (93)
Q Consensus 77 d~~~~~~~~ 85 (93)
|++++....
T Consensus 189 d~~~~~~~~ 197 (366)
T 3k26_A 189 RINSKRMMN 197 (366)
T ss_dssp ESCSHHHHH
T ss_pred ECCCCcccc
Confidence 999875443
No 82
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.62 E-value=1.6e-14 Score=81.89 Aligned_cols=84 Identities=17% Similarity=0.184 Sum_probs=73.2
Q ss_pred CccceeEEEEEe-cCCCCcceEEEeeeCCCeEEEEeCCCC------ceeEEeecccc---------ceEEE-EecCCCEE
Q psy14456 2 HDGTVRDVCFIE-DTSNKSSLLISGGAGDCKIYVTDCATG------QAFQALSGHSG---------HVLSL-YNWGGATV 64 (93)
Q Consensus 2 h~~~v~~~~~~~-~~~~~~~~~~~~g~~~~~v~~~~~~~~------~~~~~~~~~~~---------~v~~~-~~~~~~~~ 64 (93)
|...|.+++|+| + ++.+++++ .++.+++|+.+.. .....+..|.. .+.++ |++++.++
T Consensus 192 ~~~~i~~i~~~~~~----~~~l~~~~-~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 266 (342)
T 1yfq_A 192 LKYQIRDVALLPKE----QEGYACSS-IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFL 266 (342)
T ss_dssp CSSCEEEEEECSGG----GCEEEEEE-TTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCE
T ss_pred CCCceeEEEECCCC----CCEEEEEe-cCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEE
Confidence 567899999999 8 67777776 6999999999876 66777777755 89999 99999999
Q ss_pred EEecCCCcEEEEeCCCCceeeEecCc
Q psy14456 65 LSGSHDRTVRFWDLRTRGCTNVLTPI 90 (93)
Q Consensus 65 ~s~~~~~~i~~~d~~~~~~~~~~~~~ 90 (93)
++++.|+.+.+||+++++.+..+..|
T Consensus 267 ~~~~~dg~i~vwd~~~~~~~~~~~~~ 292 (342)
T 1yfq_A 267 YTAGSDGIISCWNLQTRKKIKNFAKF 292 (342)
T ss_dssp EEEETTSCEEEEETTTTEEEEECCCC
T ss_pred EEecCCceEEEEcCccHhHhhhhhcc
Confidence 99999999999999999988888765
No 83
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.61 E-value=3.1e-14 Score=80.37 Aligned_cols=82 Identities=23% Similarity=0.291 Sum_probs=73.5
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|...|.+++|+|+ ++.+++++ .++.+++||+++++.+..+..|...+.++ |++++..+++++.|+.+.+||+++
T Consensus 140 ~~~~i~~~~~~~~----~~~l~~~~-~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~ 214 (337)
T 1gxr_A 140 SAPACYALAISPD----SKVCFSCC-SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLRE 214 (337)
T ss_dssp SSSCEEEEEECTT----SSEEEEEE-TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CCCceEEEEECCC----CCEEEEEe-CCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCC
Confidence 5678999999998 77778776 69999999999999999999999999999 999999999999999999999999
Q ss_pred CceeeEec
Q psy14456 81 RGCTNVLT 88 (93)
Q Consensus 81 ~~~~~~~~ 88 (93)
+.....+.
T Consensus 215 ~~~~~~~~ 222 (337)
T 1gxr_A 215 GRQLQQHD 222 (337)
T ss_dssp TEEEEEEE
T ss_pred CceEeeec
Confidence 88776653
No 84
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.61 E-value=3.1e-14 Score=85.80 Aligned_cols=81 Identities=12% Similarity=0.159 Sum_probs=73.3
Q ss_pred CccceeEEEEEecCCCCcc-eEEEeeeCCCeEEEEeCCCCceeEEeecccc---ceEEE-EecC-CCEEEEecCCCcEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSS-LLISGGAGDCKIYVTDCATGQAFQALSGHSG---HVLSL-YNWG-GATVLSGSHDRTVRF 75 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~-~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~---~v~~~-~~~~-~~~~~s~~~~~~i~~ 75 (93)
|.+.|.+++|+|+ ++ .+++++ .|+.+++||..+++.+..+.+|.. .+.++ |+|+ +..+++++.|+.+.+
T Consensus 159 ~~~~v~~~~~~~~----~~~~l~~~~-~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v 233 (615)
T 1pgu_A 159 HSQRINACHLKQS----RPMRSMTVG-DDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISC 233 (615)
T ss_dssp CSSCEEEEEECSS----SSCEEEEEE-TTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEE
T ss_pred CCccEEEEEECCC----CCcEEEEEe-CCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEE
Confidence 6788999999998 55 566655 699999999999999999999998 99999 9999 999999999999999
Q ss_pred EeCCCCceeeEe
Q psy14456 76 WDLRTRGCTNVL 87 (93)
Q Consensus 76 ~d~~~~~~~~~~ 87 (93)
||+++++.+..+
T Consensus 234 wd~~~~~~~~~~ 245 (615)
T 1pgu_A 234 FDGKSGEFLKYI 245 (615)
T ss_dssp EETTTCCEEEEC
T ss_pred EECCCCCEeEEe
Confidence 999999988887
No 85
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.61 E-value=9.8e-15 Score=92.49 Aligned_cols=77 Identities=12% Similarity=0.072 Sum_probs=66.6
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC-----------------------------------------
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG----------------------------------------- 40 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~----------------------------------------- 40 (93)
|+..|.+++|+|+ ++.+++++ .|+.|++|++.++
T Consensus 487 h~~~V~svafspd----g~~LAsgs-~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (902)
T 2oaj_A 487 KELAVDKISFAAE----TLELAVSI-ETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGV 561 (902)
T ss_dssp SSCCEEEEEEETT----TTEEEEEE-TTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTC
T ss_pred CCCceeEEEecCC----CCeEEEEe-cCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCC
Confidence 6678999999999 78877776 6999999998765
Q ss_pred ----ceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCcee
Q psy14456 41 ----QAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCT 84 (93)
Q Consensus 41 ----~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~ 84 (93)
+++..+.+|.+.|.++ |+|++ ++++++.|+.|++||++++..+
T Consensus 562 ~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~ 609 (902)
T 2oaj_A 562 RQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAII 609 (902)
T ss_dssp SEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEE
T ss_pred CCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEE
Confidence 2356778899999999 99999 9999999999999999877654
No 86
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.61 E-value=2.9e-14 Score=80.26 Aligned_cols=78 Identities=24% Similarity=0.322 Sum_probs=64.5
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCc--eeEEeeccccceEEE-EecC--CCEEEEecCCCcEEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQ--AFQALSGHSGHVLSL-YNWG--GATVLSGSHDRTVRFW 76 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~--~~~~~~~~~~~v~~~-~~~~--~~~~~s~~~~~~i~~~ 76 (93)
|+++|.+++|+++.. ++.+++++ .|+.|++||++++. .+..+.+|...+.++ |+|+ +..+++++.|+.+++|
T Consensus 52 H~~~V~~v~~s~~~~--g~~l~s~s-~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~w 128 (297)
T 2pm7_B 52 HEGPVWRVDWAHPKF--GTILASCS-YDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVV 128 (297)
T ss_dssp CSSCEEEEEECCGGG--CSEEEEEE-TTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEE
T ss_pred ccCCeEEEEecCCCc--CCEEEEEc-CCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEE
Confidence 789999999986310 45666665 69999999998774 456677899999999 9996 7899999999999999
Q ss_pred eCCCCc
Q psy14456 77 DLRTRG 82 (93)
Q Consensus 77 d~~~~~ 82 (93)
|++++.
T Consensus 129 d~~~~~ 134 (297)
T 2pm7_B 129 EFKENG 134 (297)
T ss_dssp EBCSSS
T ss_pred EecCCC
Confidence 998763
No 87
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.61 E-value=2.8e-14 Score=80.90 Aligned_cols=82 Identities=16% Similarity=0.115 Sum_probs=69.1
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCc---eeEEeeccccceEEE-EecCCC-EEEEecCCCcEEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQ---AFQALSGHSGHVLSL-YNWGGA-TVLSGSHDRTVRFW 76 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~---~~~~~~~~~~~v~~~-~~~~~~-~~~s~~~~~~i~~~ 76 (93)
|.+.|++++|+|+ +..+++++ .|+.|++|++..+. ....+.+|...+.++ |++++. .+++++.|+.+.+|
T Consensus 10 h~~~v~~~~~s~~----~~~l~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~w 84 (342)
T 1yfq_A 10 PKDYISDIKIIPS----KSLLLITS-WDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV 84 (342)
T ss_dssp CSSCEEEEEEEGG----GTEEEEEE-TTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEE
T ss_pred CCCcEEEEEEcCC----CCEEEEEc-CCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEE
Confidence 7899999999998 78888876 59999999998776 344556899999999 999999 99999999999999
Q ss_pred eC-CCCceeeEecC
Q psy14456 77 DL-RTRGCTNVLTP 89 (93)
Q Consensus 77 d~-~~~~~~~~~~~ 89 (93)
|+ .++.. ..+..
T Consensus 85 d~~~~~~~-~~~~~ 97 (342)
T 1yfq_A 85 DLIGSPSF-QALTN 97 (342)
T ss_dssp CSSSSSSE-EECBS
T ss_pred EeccCCce-Eeccc
Confidence 99 76654 44444
No 88
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.61 E-value=1.6e-14 Score=83.33 Aligned_cols=75 Identities=21% Similarity=0.278 Sum_probs=67.7
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEee------cc---------------ccceEEE-Eec
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALS------GH---------------SGHVLSL-YNW 59 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~------~~---------------~~~v~~~-~~~ 59 (93)
|...|.+++|+|+ ++.+++++ .|+.|++||+++++.+..+. +| ...+.++ |++
T Consensus 290 ~~~~v~~~~~~~~----~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~ 364 (397)
T 1sq9_A 290 HSSWVMSLSFNDS----GETLCSAG-WDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLK 364 (397)
T ss_dssp BSSCEEEEEECSS----SSEEEEEE-TTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEEC
T ss_pred cCCcEEEEEECCC----CCEEEEEe-CCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecc
Confidence 7889999999998 77888876 69999999999999998888 77 8999999 999
Q ss_pred CC----------CEEEEecCCCcEEEEeCCCC
Q psy14456 60 GG----------ATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 60 ~~----------~~~~s~~~~~~i~~~d~~~~ 81 (93)
++ ..+++++.|+.+++||++++
T Consensus 365 ~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 365 KGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp TTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred ccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 98 79999999999999999876
No 89
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.61 E-value=1.3e-14 Score=83.65 Aligned_cols=82 Identities=22% Similarity=0.336 Sum_probs=69.6
Q ss_pred CccceeEEEEEe-cCCCCcceEEEeeeCCCeEEEEeCCCCceeEEee-------------ccccceEEE-Eec-CCCEEE
Q psy14456 2 HDGTVRDVCFIE-DTSNKSSLLISGGAGDCKIYVTDCATGQAFQALS-------------GHSGHVLSL-YNW-GGATVL 65 (93)
Q Consensus 2 h~~~v~~~~~~~-~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~-------------~~~~~v~~~-~~~-~~~~~~ 65 (93)
|++.|++++|+| + ++.+++++ .|+.|++|++.++.....+. +|...+.++ |++ ++..++
T Consensus 42 h~~~v~~~~~s~~~----~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 116 (408)
T 4a11_B 42 HGGGINTLDIEPVE----GRYMLSGG-SDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFT 116 (408)
T ss_dssp CSSCEEEEEECTTT----CCEEEEEE-TTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEE
T ss_pred cCCcEEEEEEecCC----CCEEEEEc-CCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEE
Confidence 889999999999 7 77888877 59999999998775543332 488999999 999 788999
Q ss_pred EecCCCcEEEEeCCCCceeeEec
Q psy14456 66 SGSHDRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 66 s~~~~~~i~~~d~~~~~~~~~~~ 88 (93)
+++.|+.+.+||++++.....+.
T Consensus 117 s~~~d~~i~iwd~~~~~~~~~~~ 139 (408)
T 4a11_B 117 SSSFDKTLKVWDTNTLQTADVFN 139 (408)
T ss_dssp EEETTSEEEEEETTTTEEEEEEE
T ss_pred EEeCCCeEEEeeCCCCccceecc
Confidence 99999999999999988776664
No 90
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.61 E-value=4e-14 Score=81.93 Aligned_cols=84 Identities=24% Similarity=0.374 Sum_probs=75.0
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|...|.+++|+|+ +..+++++ .++.+++||++.+..+..+..|...+.++ |++++ .+++++.|+.+.+||+++
T Consensus 246 ~~~~i~~~~~~~~----~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~ 319 (425)
T 1r5m_A 246 HHGPISVLEFNDT----NKLLLSAS-DDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQ 319 (425)
T ss_dssp CSSCEEEEEEETT----TTEEEEEE-TTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTT
T ss_pred CCCceEEEEECCC----CCEEEEEc-CCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCC
Confidence 6788999999998 67777776 69999999999999888888899999999 99988 999999999999999999
Q ss_pred CceeeEecCcc
Q psy14456 81 RGCTNVLTPIT 91 (93)
Q Consensus 81 ~~~~~~~~~~~ 91 (93)
+..+..+..+.
T Consensus 320 ~~~~~~~~~~~ 330 (425)
T 1r5m_A 320 NTLLALSIVDG 330 (425)
T ss_dssp TEEEEEEECTT
T ss_pred CcEeEecccCC
Confidence 98888776653
No 91
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.60 E-value=5e-14 Score=82.99 Aligned_cols=83 Identities=37% Similarity=0.638 Sum_probs=70.0
Q ss_pred Cccc-eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGT-VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~-v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
|.+. +.++.+ + ++.+++++ .|+.|++||+.+++.+..+.+|.+.|.++ |++++ .+++++.|+.+++||++
T Consensus 120 h~~~v~~~~~~--~----~~~l~sgs-~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~ 191 (464)
T 3v7d_B 120 HMTSVITCLQF--E----DNYVITGA-DDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIK 191 (464)
T ss_dssp CSSSCEEEEEE--E----TTEEEEEE-TTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETT
T ss_pred CCCCcEEEEEE--C----CCEEEEEc-CCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECC
Confidence 5555 456555 3 45677766 69999999999999999999999999999 98877 89999999999999999
Q ss_pred CCceeeEecCccC
Q psy14456 80 TRGCTNVLTPITV 92 (93)
Q Consensus 80 ~~~~~~~~~~~~~ 92 (93)
++.+...+..|..
T Consensus 192 ~~~~~~~~~~h~~ 204 (464)
T 3v7d_B 192 KGCCTHVFEGHNS 204 (464)
T ss_dssp TTEEEEEECCCSS
T ss_pred CCcEEEEECCCCC
Confidence 9999888877643
No 92
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.60 E-value=6.2e-14 Score=82.57 Aligned_cols=84 Identities=31% Similarity=0.453 Sum_probs=72.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|...|.++ +++ +..+++++ .|+.|++||+++++++..+.+|...+.++ |++++..+++++.|+.+++||+++
T Consensus 269 ~~~~v~~~--~~~----~~~l~~~~-~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~ 341 (464)
T 3v7d_B 269 HMASVRTV--SGH----GNIVVSGS-YDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLEN 341 (464)
T ss_dssp CSSCEEEE--EEE----TTEEEEEE-TTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT
T ss_pred ccceEEEE--cCC----CCEEEEEe-CCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Confidence 45566665 455 56777766 69999999999999999999999999999 999999999999999999999999
Q ss_pred CceeeEecCccC
Q psy14456 81 RGCTNVLTPITV 92 (93)
Q Consensus 81 ~~~~~~~~~~~~ 92 (93)
++++..+..|..
T Consensus 342 ~~~~~~~~~h~~ 353 (464)
T 3v7d_B 342 GELMYTLQGHTA 353 (464)
T ss_dssp TEEEEEECCCSS
T ss_pred CcEEEEEeCCCC
Confidence 999999887754
No 93
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.60 E-value=3.1e-14 Score=83.64 Aligned_cols=86 Identities=27% Similarity=0.360 Sum_probs=70.6
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC---ceeEEeeccccceEEE-EecCCC-EEEEecCCCcEEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG---QAFQALSGHSGHVLSL-YNWGGA-TVLSGSHDRTVRFW 76 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~---~~~~~~~~~~~~v~~~-~~~~~~-~~~s~~~~~~i~~~ 76 (93)
|.+.|.+++|+|.+ ...+++++ .++.|++||++.+ ..+..+..|...+.++ |++++. ++++++.|+.|.+|
T Consensus 230 h~~~v~~v~~~p~~---~~~l~s~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vw 305 (430)
T 2xyi_A 230 HTAVVEDVAWHLLH---ESLFGSVA-DDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 305 (430)
T ss_dssp CSSCEEEEEECSSC---TTEEEEEE-TTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEE
T ss_pred CCCCEeeeEEeCCC---CCEEEEEe-CCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEE
Confidence 67889999999953 56666665 6999999999877 5667778899999999 999775 78899999999999
Q ss_pred eCCC-CceeeEecCcc
Q psy14456 77 DLRT-RGCTNVLTPIT 91 (93)
Q Consensus 77 d~~~-~~~~~~~~~~~ 91 (93)
|+++ +..+..+..|.
T Consensus 306 d~~~~~~~~~~~~~h~ 321 (430)
T 2xyi_A 306 DLRNLKLKLHSFESHK 321 (430)
T ss_dssp ETTCTTSCSEEEECCS
T ss_pred eCCCCCCCeEEeecCC
Confidence 9998 45666666553
No 94
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.60 E-value=1.3e-14 Score=84.04 Aligned_cols=77 Identities=13% Similarity=0.223 Sum_probs=69.6
Q ss_pred CccceeEEEEEe-cCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCC-CEEEEecCCCcEEEEeC
Q psy14456 2 HDGTVRDVCFIE-DTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGG-ATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 2 h~~~v~~~~~~~-~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~-~~~~s~~~~~~i~~~d~ 78 (93)
|...|.+++|+| + +..+++++ .|+.|++||+++++.+..+.+|...+.++ |+|++ .++++++.|+.+++||+
T Consensus 261 ~~~~v~~~~~s~~~----~~~l~s~~-~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~ 335 (416)
T 2pm9_A 261 HQKGILSLDWCHQD----EHLLLSSG-RDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTL 335 (416)
T ss_dssp CSSCEEEEEECSSC----SSCEEEEE-SSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEES
T ss_pred ccCceeEEEeCCCC----CCeEEEEe-CCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEc
Confidence 778999999999 5 67778776 69999999999999999999999999999 99988 89999999999999999
Q ss_pred CCCce
Q psy14456 79 RTRGC 83 (93)
Q Consensus 79 ~~~~~ 83 (93)
.++..
T Consensus 336 ~~~~~ 340 (416)
T 2pm9_A 336 QNLTN 340 (416)
T ss_dssp CCCCC
T ss_pred cCCCC
Confidence 87654
No 95
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.60 E-value=1.5e-14 Score=82.05 Aligned_cols=78 Identities=23% Similarity=0.335 Sum_probs=64.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCc--eeEEeeccccceEEE-EecC--CCEEEEecCCCcEEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQ--AFQALSGHSGHVLSL-YNWG--GATVLSGSHDRTVRFW 76 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~--~~~~~~~~~~~v~~~-~~~~--~~~~~s~~~~~~i~~~ 76 (93)
|++.|.+++|+++.. ++.+++++ .|+.|++||++++. ....+.+|...|.++ |+|+ +.++++++.|+.+++|
T Consensus 56 H~~~V~~v~~~~~~~--~~~l~s~s-~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lw 132 (316)
T 3bg1_A 56 HEGPVWQVAWAHPMY--GNILASCS-YDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLL 132 (316)
T ss_dssp CSSCEEEEEECCGGG--SSCEEEEE-TTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEE
T ss_pred CCccEEEEEeCCCCC--CCEEEEEE-CCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEE
Confidence 789999999975310 46677766 69999999998873 566778899999999 9997 7899999999999999
Q ss_pred eCCCCc
Q psy14456 77 DLRTRG 82 (93)
Q Consensus 77 d~~~~~ 82 (93)
|++.+.
T Consensus 133 d~~~~~ 138 (316)
T 3bg1_A 133 TYTGEG 138 (316)
T ss_dssp EECSSS
T ss_pred ecCCCC
Confidence 998753
No 96
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.60 E-value=9.3e-15 Score=84.71 Aligned_cols=86 Identities=21% Similarity=0.292 Sum_probs=72.9
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCC---eEEEEeCCCC-ceeEEee-ccccceEEE-Eec-CCCEEEEecCCCcEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDC---KIYVTDCATG-QAFQALS-GHSGHVLSL-YNW-GGATVLSGSHDRTVR 74 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~---~v~~~~~~~~-~~~~~~~-~~~~~v~~~-~~~-~~~~~~s~~~~~~i~ 74 (93)
|...|.+++|+|++ ...+++++ .++ .|++||++++ ..+..+. +|...+.++ |+| ++.++++++.|+.++
T Consensus 213 ~~~~v~~~~~~~~~---~~~l~~~~-~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~ 288 (416)
T 2pm9_A 213 IKQQLSVVEWHPKN---STRVATAT-GSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVL 288 (416)
T ss_dssp CCCCEEEEEECSSC---TTEEEEEE-CCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEE
T ss_pred cCCceEEEEECCCC---CCEEEEEE-CCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEE
Confidence 37889999999983 34566655 588 9999999986 5667777 899999999 999 899999999999999
Q ss_pred EEeCCCCceeeEecCcc
Q psy14456 75 FWDLRTRGCTNVLTPIT 91 (93)
Q Consensus 75 ~~d~~~~~~~~~~~~~~ 91 (93)
+||+++++.+..+..|.
T Consensus 289 ~wd~~~~~~~~~~~~~~ 305 (416)
T 2pm9_A 289 LWNPESAEQLSQFPARG 305 (416)
T ss_dssp EECSSSCCEEEEEECSS
T ss_pred EeeCCCCccceeecCCC
Confidence 99999999988887664
No 97
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.60 E-value=1.8e-14 Score=84.22 Aligned_cols=83 Identities=11% Similarity=0.202 Sum_probs=69.6
Q ss_pred CccceeEEEEEecCCCCc-ceEEEeeeCCCeEEEEeCCCCce----eEEeecccc------------ceEEE-EecCCCE
Q psy14456 2 HDGTVRDVCFIEDTSNKS-SLLISGGAGDCKIYVTDCATGQA----FQALSGHSG------------HVLSL-YNWGGAT 63 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~~~----~~~~~~~~~------------~v~~~-~~~~~~~ 63 (93)
|.+.|.+++|+|+ + ..+++++ .|+.|++||++++.. ...+..|.. .+.++ |++++.+
T Consensus 225 ~~~~v~~~~~~p~----~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 299 (447)
T 3dw8_B 225 LTEVITAAEFHPN----SCNTFVYSS-SKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRY 299 (447)
T ss_dssp CCCCEEEEEECSS----CTTEEEEEE-TTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSE
T ss_pred cCcceEEEEECCC----CCcEEEEEe-CCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCE
Confidence 6788999999998 5 6777766 699999999998876 677777776 89999 9999999
Q ss_pred EEEecCCCcEEEEeCCC-CceeeEecCc
Q psy14456 64 VLSGSHDRTVRFWDLRT-RGCTNVLTPI 90 (93)
Q Consensus 64 ~~s~~~~~~i~~~d~~~-~~~~~~~~~~ 90 (93)
+++++. +.+++||+++ +.++..+..|
T Consensus 300 l~~~~~-~~v~iwd~~~~~~~~~~~~~~ 326 (447)
T 3dw8_B 300 MMTRDY-LSVKVWDLNMENRPVETYQVH 326 (447)
T ss_dssp EEEEES-SEEEEEETTCCSSCSCCEESC
T ss_pred EEEeeC-CeEEEEeCCCCccccceeecc
Confidence 999988 9999999997 7777777655
No 98
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.59 E-value=1.4e-14 Score=84.65 Aligned_cols=84 Identities=14% Similarity=0.247 Sum_probs=69.2
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC-CceeE-------EeeccccceEEE-EecCC-CEEEEecCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT-GQAFQ-------ALSGHSGHVLSL-YNWGG-ATVLSGSHDR 71 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~~-------~~~~~~~~v~~~-~~~~~-~~~~s~~~~~ 71 (93)
|+..|.+++|+|+ ++.++++ . |+.|++||++. +..+. .+.+|...+.++ |+|++ ..+++++.|+
T Consensus 176 h~~~v~~~~~~~~----~~~l~s~-~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg 249 (447)
T 3dw8_B 176 HTYHINSISINSD----YETYLSA-D-DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKG 249 (447)
T ss_dssp CSSCCCEEEECTT----SSEEEEE-C-SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTS
T ss_pred CCcceEEEEEcCC----CCEEEEe-C-CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCC
Confidence 7889999999998 6777775 4 99999999984 44443 256789999999 99987 9999999999
Q ss_pred cEEEEeCCCCce----eeEecCcc
Q psy14456 72 TVRFWDLRTRGC----TNVLTPIT 91 (93)
Q Consensus 72 ~i~~~d~~~~~~----~~~~~~~~ 91 (93)
.+++||++++.. ...+..+.
T Consensus 250 ~i~iwd~~~~~~~~~~~~~~~~~~ 273 (447)
T 3dw8_B 250 TIRLCDMRASALCDRHSKLFEEPE 273 (447)
T ss_dssp CEEEEETTTCSSSCTTCEEECCC-
T ss_pred eEEEEECcCCccccceeeEeccCC
Confidence 999999998876 66666553
No 99
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.59 E-value=6.7e-14 Score=80.74 Aligned_cols=80 Identities=20% Similarity=0.233 Sum_probs=68.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCC-EEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGA-TVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~-~~~s~~~~~~i~~~d~~ 79 (93)
|...|.+++|+|+ +..+++++ .|+.|++||+ .+..+..+.+|...+.++ |++++. ++++++.|+.+++||++
T Consensus 162 ~~~~v~~~~~~~~----~~~l~~~~-~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 235 (383)
T 3ei3_B 162 WDYWYCCVDVSVS----RQMLATGD-STGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLR 235 (383)
T ss_dssp SSCCEEEEEEETT----TTEEEEEE-TTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGG
T ss_pred CCCCeEEEEECCC----CCEEEEEC-CCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCC
Confidence 3477999999998 77777776 6999999998 577788889999999999 999888 99999999999999999
Q ss_pred C----CceeeEe
Q psy14456 80 T----RGCTNVL 87 (93)
Q Consensus 80 ~----~~~~~~~ 87 (93)
+ +..+..+
T Consensus 236 ~~~~~~~~~~~~ 247 (383)
T 3ei3_B 236 NIKDKNSYIAEM 247 (383)
T ss_dssp GCCSTTCEEEEE
T ss_pred CCCcccceEEEe
Confidence 7 5555544
No 100
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.59 E-value=4.2e-14 Score=82.19 Aligned_cols=82 Identities=16% Similarity=0.180 Sum_probs=70.7
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCcee
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCT 84 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~ 84 (93)
+....|+|+ ++.+++++ .|+.|++||++++.....+.+|...+.++ |+|++..+++++.|+.+++||+++++..
T Consensus 100 ~~~~~~~~~----~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~ 174 (420)
T 3vl1_A 100 TAVDTAKLQ----MRRFILGT-TEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNP 174 (420)
T ss_dssp EEEEEECSS----SCEEEEEE-TTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCC
T ss_pred eEEEEEecC----CCEEEEEE-CCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCc
Confidence 344466777 67777766 69999999999998888888999999999 9999999999999999999999999888
Q ss_pred eEecCccC
Q psy14456 85 NVLTPITV 92 (93)
Q Consensus 85 ~~~~~~~~ 92 (93)
..+..|..
T Consensus 175 ~~~~~h~~ 182 (420)
T 3vl1_A 175 RTLIGHRA 182 (420)
T ss_dssp EEEECCSS
T ss_pred eEEcCCCC
Confidence 88877653
No 101
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.58 E-value=8.7e-14 Score=81.43 Aligned_cols=81 Identities=17% Similarity=0.255 Sum_probs=68.4
Q ss_pred ccceeEEEEE--ecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeec--cccceEEE-EecCCCEEEEecCCCcEEEEe
Q psy14456 3 DGTVRDVCFI--EDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSG--HSGHVLSL-YNWGGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 3 ~~~v~~~~~~--~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~--~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d 77 (93)
...+.++.+. ++ +..+++++ .|+.|++||+++++.+..+.+ |...+.++ |++++..+++++.|+.+++||
T Consensus 168 ~~~~~~~~~~~~~~----~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 242 (437)
T 3gre_A 168 NEYAVRMRAFVNEE----KSLLVALT-NLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWD 242 (437)
T ss_dssp CCCEEEEEEEECSS----CEEEEEEE-TTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred ccCceEEEEEEcCC----CCEEEEEe-CCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 3456666643 44 56667766 699999999999999998887 88999999 999999999999999999999
Q ss_pred CCCCceeeEec
Q psy14456 78 LRTRGCTNVLT 88 (93)
Q Consensus 78 ~~~~~~~~~~~ 88 (93)
++++.++..+.
T Consensus 243 ~~~~~~~~~~~ 253 (437)
T 3gre_A 243 IRFNVLIRSWS 253 (437)
T ss_dssp TTTTEEEEEEB
T ss_pred cCCccEEEEEe
Confidence 99998888764
No 102
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.58 E-value=4.8e-14 Score=82.85 Aligned_cols=74 Identities=20% Similarity=0.387 Sum_probs=63.7
Q ss_pred CccceeEEEEEecCCCCcc-eEEEeeeCCCeEEEEeCCC-CceeEEeeccccceEEE-EecCC-CEEEEecCCCcEEEEe
Q psy14456 2 HDGTVRDVCFIEDTSNKSS-LLISGGAGDCKIYVTDCAT-GQAFQALSGHSGHVLSL-YNWGG-ATVLSGSHDRTVRFWD 77 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~-~~~~~g~~~~~v~~~~~~~-~~~~~~~~~~~~~v~~~-~~~~~-~~~~s~~~~~~i~~~d 77 (93)
|.+.|.+++|+|+ +. .+++++ .|+.|++||++. ...+..+..|...+.++ |+|++ .++++++.|+.|.+||
T Consensus 276 ~~~~v~~i~~~p~----~~~~l~tg~-~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd 350 (430)
T 2xyi_A 276 HTAEVNCLSFNPY----SEFILATGS-ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 350 (430)
T ss_dssp CSSCEEEEEECSS----CTTEEEEEE-TTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEE
T ss_pred CCCCeEEEEeCCC----CCCEEEEEe-CCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEe
Confidence 6788999999998 55 455555 699999999987 56678888899999999 99977 5789999999999999
Q ss_pred CCC
Q psy14456 78 LRT 80 (93)
Q Consensus 78 ~~~ 80 (93)
++.
T Consensus 351 ~~~ 353 (430)
T 2xyi_A 351 LSK 353 (430)
T ss_dssp GGG
T ss_pred CCC
Confidence 987
No 103
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.58 E-value=2.1e-13 Score=79.39 Aligned_cols=83 Identities=27% Similarity=0.366 Sum_probs=71.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCC-CCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCA-TGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
|.+.|.+++|. ++.+++++ .|+.|++||++ ....+..+.+|...+.++ |++++..+++++.|+.+++||++
T Consensus 175 ~~~~v~~~~~~------~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~ 247 (401)
T 4aez_A 175 HQARVGCLSWN------RHVLSSGS-RSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDAR 247 (401)
T ss_dssp CSSCEEEEEEE------TTEEEEEE-TTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCCceEEEEEC------CCEEEEEc-CCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCC
Confidence 77899999994 45666665 69999999998 456677888999999999 99999999999999999999999
Q ss_pred CCceeeEecCcc
Q psy14456 80 TRGCTNVLTPIT 91 (93)
Q Consensus 80 ~~~~~~~~~~~~ 91 (93)
++.....+..+.
T Consensus 248 ~~~~~~~~~~~~ 259 (401)
T 4aez_A 248 SSIPKFTKTNHN 259 (401)
T ss_dssp CSSEEEEECCCS
T ss_pred CCCccEEecCCc
Confidence 998888877654
No 104
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.57 E-value=5.6e-14 Score=81.05 Aligned_cols=81 Identities=23% Similarity=0.351 Sum_probs=63.9
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC-----------------------------------------
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG----------------------------------------- 40 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~----------------------------------------- 40 (93)
|.+.|.+++|+|+ +..+++++ .|+.+++||+.++
T Consensus 244 ~~~~v~~~~~~~~----~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 318 (408)
T 4a11_B 244 HNGKVNGLCFTSD----GLHLLTVG-TDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAV 318 (408)
T ss_dssp CSSCEEEEEECTT----SSEEEEEE-TTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEE
T ss_pred ccCceeEEEEcCC----CCEEEEec-CCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEE
Confidence 6788999999998 77888776 5999999997653
Q ss_pred ------ceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEe
Q psy14456 41 ------QAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVL 87 (93)
Q Consensus 41 ------~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~ 87 (93)
..+..+.+|...+.++ |++++.++++++.|+.+++||+++++.+...
T Consensus 319 ~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~ 372 (408)
T 4a11_B 319 YTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDD 372 (408)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-------
T ss_pred EECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCC
Confidence 3455667899999999 9999999999999999999999988765544
No 105
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.57 E-value=6.2e-15 Score=88.97 Aligned_cols=85 Identities=11% Similarity=0.068 Sum_probs=69.5
Q ss_pred CccceeEE--EEEecCCCCc-ceEEEeeeCCCeEEEEeCCCCceeEEeecccc--ceEEE-EecCCCEEEEecCCCcEEE
Q psy14456 2 HDGTVRDV--CFIEDTSNKS-SLLISGGAGDCKIYVTDCATGQAFQALSGHSG--HVLSL-YNWGGATVLSGSHDRTVRF 75 (93)
Q Consensus 2 h~~~v~~~--~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~--~v~~~-~~~~~~~~~s~~~~~~i~~ 75 (93)
|++.|.++ .|+|+ + ..+++++ .|+++++||++++++...+.+|.. .+.++ |+|++..+++++.|+.+++
T Consensus 307 H~~~V~sv~~~~s~~----g~~~laS~S-~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~l 381 (524)
T 2j04_B 307 HDSYILSVSTAYSDF----EDTVVSTVA-VDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRA 381 (524)
T ss_dssp SSSCEEEEEEECCTT----SCCEEEEEE-TTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEE
T ss_pred ccccEEEEEEEcCCC----CCeEEEEec-cCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEE
Confidence 78899999 45665 4 5666665 699999999998887777766653 46788 9999999999999999999
Q ss_pred EeCCCCceeeEecCcc
Q psy14456 76 WDLRTRGCTNVLTPIT 91 (93)
Q Consensus 76 ~d~~~~~~~~~~~~~~ 91 (93)
||++++.++..+.+|.
T Consensus 382 wd~~~~~~~~~l~gH~ 397 (524)
T 2j04_B 382 VPSRAAFAVHPLVSRE 397 (524)
T ss_dssp EETTCTTCCEEEEECS
T ss_pred EECcccccceeeecCC
Confidence 9999998877777664
No 106
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.57 E-value=6.7e-14 Score=88.74 Aligned_cols=80 Identities=9% Similarity=0.129 Sum_probs=67.1
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeecc------------------ccceEEE-EecCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGH------------------SGHVLSL-YNWGGA 62 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~------------------~~~v~~~-~~~~~~ 62 (93)
|.++|.+++|+|++ ...++++ +.|+.+ +||+++++++..+..| ...|.++ |+|++.
T Consensus 150 h~~~V~sl~~sp~~---~~~l~~g-~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~ 224 (902)
T 2oaj_A 150 RLSPIVSIQWNPRD---IGTVLIS-YEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSL 224 (902)
T ss_dssp CCCCCCEEEEETTE---EEEEEEE-CSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSS
T ss_pred CCCCeEEEEEccCC---CCEEEEE-eCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCC
Confidence 67899999999962 3455554 469999 9999999888777655 4679999 999999
Q ss_pred EEEEecCCCcEEEEeCCCCceeeE
Q psy14456 63 TVLSGSHDRTVRFWDLRTRGCTNV 86 (93)
Q Consensus 63 ~~~s~~~~~~i~~~d~~~~~~~~~ 86 (93)
.+++++.|+.+++||+++++++..
T Consensus 225 ~lasgs~Dg~i~lWd~~~g~~~~~ 248 (902)
T 2oaj_A 225 HIITIHEDNSLVFWDANSGHMIMA 248 (902)
T ss_dssp EEEEEETTCCEEEEETTTCCEEEE
T ss_pred EEEEEECCCeEEEEECCCCcEEEE
Confidence 999999999999999999877653
No 107
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.57 E-value=3.1e-14 Score=80.96 Aligned_cols=76 Identities=20% Similarity=0.240 Sum_probs=63.0
Q ss_pred CccceeEEEEEecCCCCcc-eEEEeeeCCCeEEEEeCCCC-------------------ceeEEeeccccceEEE-EecC
Q psy14456 2 HDGTVRDVCFIEDTSNKSS-LLISGGAGDCKIYVTDCATG-------------------QAFQALSGHSGHVLSL-YNWG 60 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~-~~~~~g~~~~~v~~~~~~~~-------------------~~~~~~~~~~~~v~~~-~~~~ 60 (93)
|...|.+++|+|+ +. .+++++ .|+.+++||++.+ ..+..+.+|...+.++ |+++
T Consensus 258 ~~~~v~~~~~~~~----~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 332 (357)
T 3i2n_A 258 HKSTVWQVRHLPQ----NRELFLTAG-GAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPD 332 (357)
T ss_dssp CSSCEEEEEEETT----EEEEEEEEE-TTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSS
T ss_pred CcCCEEEEEECCC----CCcEEEEEe-CCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCC
Confidence 7789999999998 66 566655 6999999998743 3566778899999999 9999
Q ss_pred CCEEE-EecCCCcEEEEeCCCCc
Q psy14456 61 GATVL-SGSHDRTVRFWDLRTRG 82 (93)
Q Consensus 61 ~~~~~-s~~~~~~i~~~d~~~~~ 82 (93)
+..++ +++.|+.+++||+.+..
T Consensus 333 ~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 333 KRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp STTEEEEEETTSEEEEEEECC--
T ss_pred CCeEEEEecCCCcEEEEECCCcc
Confidence 98887 89999999999998754
No 108
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.56 E-value=1.9e-13 Score=77.88 Aligned_cols=79 Identities=14% Similarity=0.143 Sum_probs=71.1
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC-CceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCc
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT-GQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRG 82 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~ 82 (93)
.+.+++|+|+ ++.+++++ .++.|++||+++ ...+..+..|...+.++ |++++..+++++.|+.+.+||++++.
T Consensus 177 ~~~~~~~~~~----~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 251 (369)
T 3zwl_B 177 AATVAGWSTK----GKYIIAGH-KDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQ 251 (369)
T ss_dssp CEEEEEECGG----GCEEEEEE-TTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred ceeEEEEcCC----CCEEEEEc-CCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCc
Confidence 8999999998 77777766 699999999998 67788888899999999 99999999999999999999999988
Q ss_pred eeeEec
Q psy14456 83 CTNVLT 88 (93)
Q Consensus 83 ~~~~~~ 88 (93)
....+.
T Consensus 252 ~~~~~~ 257 (369)
T 3zwl_B 252 VLKKYE 257 (369)
T ss_dssp EEEEEE
T ss_pred eeeeec
Confidence 877764
No 109
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.56 E-value=1.8e-13 Score=79.67 Aligned_cols=83 Identities=22% Similarity=0.316 Sum_probs=71.3
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|.+.|.+++|+|+ ++.+++++ .|+.+++||+.+++.+..+.+|...+.++ | ++..+++++.|+.+.+||++.
T Consensus 133 ~~~~v~~v~~s~~----~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~ 205 (401)
T 4aez_A 133 ESTYVASVKWSHD----GSFLSVGL-GNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRI 205 (401)
T ss_dssp TTCCEEEEEECTT----SSEEEEEE-TTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTS
T ss_pred CCCCEEEEEECCC----CCEEEEEC-CCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEeccc
Confidence 6788999999998 77777776 59999999999999999999999999999 8 567999999999999999994
Q ss_pred -CceeeEecCcc
Q psy14456 81 -RGCTNVLTPIT 91 (93)
Q Consensus 81 -~~~~~~~~~~~ 91 (93)
+.....+..|.
T Consensus 206 ~~~~~~~~~~~~ 217 (401)
T 4aez_A 206 ANHQIGTLQGHS 217 (401)
T ss_dssp SSCEEEEEECCS
T ss_pred CcceeeEEcCCC
Confidence 55566665553
No 110
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.55 E-value=1.3e-13 Score=78.93 Aligned_cols=78 Identities=24% Similarity=0.320 Sum_probs=66.2
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCc--eeEEeeccccceEEE-EecC--CCEEEEecCCCcEEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQ--AFQALSGHSGHVLSL-YNWG--GATVLSGSHDRTVRFW 76 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~--~~~~~~~~~~~v~~~-~~~~--~~~~~s~~~~~~i~~~ 76 (93)
|.+.|.+++|+++.. +..+++++ .|+.|++||++++. .+..+..|...+.++ |+++ +..+++++.|+.+.+|
T Consensus 54 h~~~v~~~~~~~~~~--~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~ 130 (379)
T 3jrp_A 54 HEGPVWRVDWAHPKF--GTILASCS-YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVV 130 (379)
T ss_dssp CSSCEEEEEECCGGG--CSEEEEEE-TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEE
T ss_pred CCCcEEEEEeCCCCC--CCEEEEec-cCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEE
Confidence 788999999986521 35666665 69999999999886 667778899999999 9998 8999999999999999
Q ss_pred eCCCCc
Q psy14456 77 DLRTRG 82 (93)
Q Consensus 77 d~~~~~ 82 (93)
|++++.
T Consensus 131 d~~~~~ 136 (379)
T 3jrp_A 131 EFKENG 136 (379)
T ss_dssp ECCTTS
T ss_pred ecCCCC
Confidence 999874
No 111
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.55 E-value=2.5e-14 Score=86.36 Aligned_cols=82 Identities=12% Similarity=0.047 Sum_probs=65.5
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCc-eeEEeeccccceEEE-E--ecCC-CEEEEecCCCcEEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQ-AFQALSGHSGHVLSL-Y--NWGG-ATVLSGSHDRTVRFW 76 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~-~~~~~~~~~~~v~~~-~--~~~~-~~~~s~~~~~~i~~~ 76 (93)
|++.|++++|+++ . .+++++ .|+.|++||++++. ....+.+|...|.++ + ++++ .++++++.|+++++|
T Consensus 265 h~~~v~sv~~s~~----~-~lasgs-~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklW 338 (524)
T 2j04_B 265 ADSLITTFDFLSP----T-TVVCGF-KNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIF 338 (524)
T ss_dssp TTTCEEEEEESSS----S-EEEEEE-TTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEE
T ss_pred CCCCEEEEEecCC----C-eEEEEe-CCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEE
Confidence 6788999999975 3 566655 69999999998764 455678999999987 3 5566 899999999999999
Q ss_pred eCCCCceeeEecC
Q psy14456 77 DLRTRGCTNVLTP 89 (93)
Q Consensus 77 d~~~~~~~~~~~~ 89 (93)
|++++++...+.+
T Consensus 339 D~~~~~~~~~~~~ 351 (524)
T 2j04_B 339 NPKDIATTKTTVS 351 (524)
T ss_dssp CGGGHHHHCEEEE
T ss_pred ECCCCCccccccc
Confidence 9998776555443
No 112
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.55 E-value=2e-13 Score=80.17 Aligned_cols=81 Identities=33% Similarity=0.476 Sum_probs=69.9
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|...|.++.+ + ++.+++++ .|+.|++||..+++....+.+|.+.+.++ | ++..+++++.|+.+++||+++
T Consensus 132 ~~~~v~~~~~--d----~~~l~~g~-~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~ 202 (435)
T 1p22_A 132 TSKGVYCLQY--D----DQKIVSGL-RDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNT 202 (435)
T ss_dssp SCCCEEEEEC--C----SSEEEEEE-SSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSS
T ss_pred CCCcEEEEEE--C----CCEEEEEe-CCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCC
Confidence 3456888876 4 56777766 69999999999999999999999999998 6 788999999999999999999
Q ss_pred CceeeEecCcc
Q psy14456 81 RGCTNVLTPIT 91 (93)
Q Consensus 81 ~~~~~~~~~~~ 91 (93)
++....+..|.
T Consensus 203 ~~~~~~~~~h~ 213 (435)
T 1p22_A 203 GEMLNTLIHHC 213 (435)
T ss_dssp CCEEEEECCCC
T ss_pred CcEEEEEcCCC
Confidence 99988887664
No 113
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.54 E-value=2.2e-13 Score=78.71 Aligned_cols=83 Identities=16% Similarity=0.046 Sum_probs=61.1
Q ss_pred CccceeEEEEEe-cCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccc---cceEEE-EecCCCEE------------
Q psy14456 2 HDGTVRDVCFIE-DTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHS---GHVLSL-YNWGGATV------------ 64 (93)
Q Consensus 2 h~~~v~~~~~~~-~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~---~~v~~~-~~~~~~~~------------ 64 (93)
|+..++.++|+| ++ .+..+++++ .|++|++||+++++++..+.+|. ..+.++ |+|++..+
T Consensus 177 ~~~~v~~l~fs~~~g--~~~~LaSgS-~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~l 253 (356)
T 2w18_A 177 MPPEETILTFAEVQG--MQEALLGTT-IMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESE 253 (356)
T ss_dssp CCCSSCEEEEEEEET--STTEEEEEE-TTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC--------
T ss_pred CCCceeeEEeeccCC--CCceEEEec-CCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCccee
Confidence 555667777777 21 145666655 69999999999999999997653 356677 99998876
Q ss_pred EEecCCCcEEEEeCCCCceeeEe
Q psy14456 65 LSGSHDRTVRFWDLRTRGCTNVL 87 (93)
Q Consensus 65 ~s~~~~~~i~~~d~~~~~~~~~~ 87 (93)
++++.|+++++||..++.++..+
T Consensus 254 aSGs~D~tIklWd~~tgk~l~v~ 276 (356)
T 2w18_A 254 SLRSPVFQLIVINPKTTLSVGVM 276 (356)
T ss_dssp ----CCEEEEEEETTTTEEEEEE
T ss_pred eccCCCcEEEEEECCCCEEEEEE
Confidence 56788999999999999876654
No 114
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.54 E-value=1.1e-13 Score=81.59 Aligned_cols=85 Identities=9% Similarity=0.084 Sum_probs=71.5
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeE----EeeccccceEEE-EecC---CCEEEEecCCCcE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQ----ALSGHSGHVLSL-YNWG---GATVLSGSHDRTV 73 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~----~~~~~~~~v~~~-~~~~---~~~~~s~~~~~~i 73 (93)
|...|.+++|+|+ +..+++++ .++.+.+|++..+.... .+.+|...+.++ |+|+ +.++++++.|+.|
T Consensus 148 ~~~~v~~~~~sp~----~~~l~~~~-~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i 222 (450)
T 2vdu_B 148 FSKRPNAISIAED----DTTVIIAD-KFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHI 222 (450)
T ss_dssp CSSCEEEEEECTT----SSEEEEEE-TTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCE
T ss_pred CCCCceEEEEcCC----CCEEEEEe-CCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcE
Confidence 4578999999998 77777776 69999999998776443 677899999999 9999 8899999999999
Q ss_pred EEEeCCCCceeeEe-cCcc
Q psy14456 74 RFWDLRTRGCTNVL-TPIT 91 (93)
Q Consensus 74 ~~~d~~~~~~~~~~-~~~~ 91 (93)
++||++++..+..+ .+|.
T Consensus 223 ~vwd~~~~~~~~~~~~~h~ 241 (450)
T 2vdu_B 223 KISHYPQCFIVDKWLFGHK 241 (450)
T ss_dssp EEEEESCTTCEEEECCCCS
T ss_pred EEEECCCCceeeeeecCCC
Confidence 99999998877764 3443
No 115
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.53 E-value=5.6e-13 Score=78.29 Aligned_cols=82 Identities=34% Similarity=0.560 Sum_probs=71.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|.+.|.+++| + ++.+++++ .|+.+++||+++++.+..+.+|...+.++ + ++..+++++.|+.+++||+++
T Consensus 255 ~~~~v~~~~~--~----~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~ 325 (435)
T 1p22_A 255 HRAAVNVVDF--D----DKYIVSAS-GDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIEC 325 (435)
T ss_dssp CSSCEEEEEE--E----TTEEEEEE-TTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEe--C----CCEEEEEe-CCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCC
Confidence 6778999998 3 56777766 69999999999999999999999999998 7 578999999999999999999
Q ss_pred CceeeEecCccC
Q psy14456 81 RGCTNVLTPITV 92 (93)
Q Consensus 81 ~~~~~~~~~~~~ 92 (93)
+.++..+..|..
T Consensus 326 ~~~~~~~~~h~~ 337 (435)
T 1p22_A 326 GACLRVLEGHEE 337 (435)
T ss_dssp CCEEEEECCCSS
T ss_pred CCEEEEEeCCcC
Confidence 999998887653
No 116
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.53 E-value=1.4e-13 Score=83.76 Aligned_cols=73 Identities=12% Similarity=0.124 Sum_probs=62.2
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeecccc-----ceEEE-EecCCCEEEEecCCCcEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSG-----HVLSL-YNWGGATVLSGSHDRTVRF 75 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~-----~v~~~-~~~~~~~~~s~~~~~~i~~ 75 (93)
|...|.+++|+|+ +..+++++ .||.+++|+.+. ++..+. |.. .+.++ |+|+++.+++++.|+.+++
T Consensus 84 ~~~~V~~vawSPd----G~~LAs~s-~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkI 155 (588)
T 2j04_A 84 PVCYPRVCKPSPI----DDWMAVLS-NNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQF 155 (588)
T ss_dssp CSCCEEEEEECSS----SSCEEEEE-TTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEE
T ss_pred CCCcEEEEEECCC----CCEEEEEe-CCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEE
Confidence 4578999999999 78888877 599999999544 566666 554 48899 9999999999999999999
Q ss_pred EeCCCCc
Q psy14456 76 WDLRTRG 82 (93)
Q Consensus 76 ~d~~~~~ 82 (93)
||+.++.
T Consensus 156 Wd~~~~~ 162 (588)
T 2j04_A 156 FSIRKNS 162 (588)
T ss_dssp EECCCCT
T ss_pred EECCCCc
Confidence 9999875
No 117
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.53 E-value=3.9e-14 Score=83.74 Aligned_cols=83 Identities=14% Similarity=0.101 Sum_probs=65.8
Q ss_pred ccceeEEEEEecCCCCcceEEE---eeeCCCeEEEEeCCCC--------ce---eEEeeccccceEEE-EecC-CCEEEE
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLIS---GGAGDCKIYVTDCATG--------QA---FQALSGHSGHVLSL-YNWG-GATVLS 66 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~---~g~~~~~v~~~~~~~~--------~~---~~~~~~~~~~v~~~-~~~~-~~~~~s 66 (93)
.+.|.+++|+|+ +++++. +|+.|+.|++||++++ +. +..+.+|...+.++ |+|+ +.++++
T Consensus 92 ~~~v~~l~~spd----g~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las 167 (434)
T 2oit_A 92 KFPIHHLALSCD----NLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAV 167 (434)
T ss_dssp SSCEEEEEECTT----SCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEE
T ss_pred CCcccEEEEcCC----CCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEE
Confidence 456999999999 677773 4446999999998654 22 34556789999999 9997 889999
Q ss_pred ecCCCcEEEEeCCCCceeeEecC
Q psy14456 67 GSHDRTVRFWDLRTRGCTNVLTP 89 (93)
Q Consensus 67 ~~~~~~i~~~d~~~~~~~~~~~~ 89 (93)
++.|+.+++||++++........
T Consensus 168 ~s~Dg~v~iwD~~~~~~~~~~~~ 190 (434)
T 2oit_A 168 CLADGSIAVLQVTETVKVCATLP 190 (434)
T ss_dssp EETTSCEEEEEESSSEEEEEEEC
T ss_pred EECCCeEEEEEcCCCcceeeccC
Confidence 99999999999998866544433
No 118
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.52 E-value=1.4e-13 Score=79.45 Aligned_cols=56 Identities=16% Similarity=0.153 Sum_probs=48.1
Q ss_pred EEeeeCCCeEEEEeCCCCceeEEeeccccceE-EE-EecCCCEEEEecCCCcEEEEeC
Q psy14456 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVL-SL-YNWGGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 23 ~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~-~~-~~~~~~~~~s~~~~~~i~~~d~ 78 (93)
+++|+.|++|++||+.+++++..+.+|...+. .+ |+|+++++++|+.|++|++||+
T Consensus 298 lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 298 AAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 45555799999999999999999998887655 57 9999999999999999999996
No 119
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.52 E-value=7.6e-13 Score=77.80 Aligned_cols=82 Identities=32% Similarity=0.502 Sum_probs=68.6
Q ss_pred Cccce-eEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 2 HDGTV-RDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v-~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
|.+.| .++ +++ ++.+++++ .|+.|++||+.+++.+..+.+|...+.++ |+ +..+++++.|+.+++||+.
T Consensus 117 h~~~v~~~~--~~~----g~~l~sg~-~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~ 187 (445)
T 2ovr_B 117 HDDHVITCL--QFC----GNRIVSGS-DDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAE 187 (445)
T ss_dssp STTSCEEEE--EEE----TTEEEEEE-TTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETT
T ss_pred cCCCcEEEE--EEc----CCEEEEEE-CCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECC
Confidence 55654 554 445 56777766 69999999999999999999999999999 86 6799999999999999999
Q ss_pred CCceeeEecCccC
Q psy14456 80 TRGCTNVLTPITV 92 (93)
Q Consensus 80 ~~~~~~~~~~~~~ 92 (93)
+++....+..|..
T Consensus 188 ~~~~~~~~~~h~~ 200 (445)
T 2ovr_B 188 TGECIHTLYGHTS 200 (445)
T ss_dssp TTEEEEEECCCSS
T ss_pred cCcEEEEECCCCC
Confidence 9998888877653
No 120
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.52 E-value=3.2e-14 Score=82.90 Aligned_cols=70 Identities=17% Similarity=0.196 Sum_probs=56.3
Q ss_pred EEEeeeCCCeEEEEeCCCCcee-----EEeeccccceEEE-Eec--------CCCEEEEecCCCcEEEEeCCCCceeeEe
Q psy14456 22 LISGGAGDCKIYVTDCATGQAF-----QALSGHSGHVLSL-YNW--------GGATVLSGSHDRTVRFWDLRTRGCTNVL 87 (93)
Q Consensus 22 ~~~~g~~~~~v~~~~~~~~~~~-----~~~~~~~~~v~~~-~~~--------~~~~~~s~~~~~~i~~~d~~~~~~~~~~ 87 (93)
++++++.|++|++||.+.+... ..+.+|.+.|.++ |+| ++++|++++.|+++++||++++.+...+
T Consensus 103 ~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~ 182 (393)
T 4gq1_A 103 FLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAG 182 (393)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEE
T ss_pred EEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeee
Confidence 3444557999999999887543 3457899999999 987 6789999999999999999988776666
Q ss_pred cCcc
Q psy14456 88 TPIT 91 (93)
Q Consensus 88 ~~~~ 91 (93)
..+.
T Consensus 183 ~~~~ 186 (393)
T 4gq1_A 183 YPLS 186 (393)
T ss_dssp EECS
T ss_pred cCCC
Confidence 5543
No 121
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.51 E-value=4.4e-13 Score=81.57 Aligned_cols=73 Identities=10% Similarity=0.078 Sum_probs=62.5
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCce-------eEEe----eccccceEEE-EecCCCEEEEecCCC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQA-------FQAL----SGHSGHVLSL-YNWGGATVLSGSHDR 71 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-------~~~~----~~~~~~v~~~-~~~~~~~~~s~~~~~ 71 (93)
..|.+++|+|+ ++.+++++ +||.|++|++..+.. +..+ .+|.+.|.++ |+|++ +++++.|+
T Consensus 130 ~sv~svafSPD----G~~LAsgs-~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~ 202 (588)
T 2j04_A 130 RTYHCFEWNPI----ESSIVVGN-EDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNN 202 (588)
T ss_dssp TCEEEEEECSS----SSCEEEEE-TTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTC
T ss_pred ccEEEEEEcCC----CCEEEEEc-CCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCC
Confidence 35999999999 78888877 699999999998752 5665 5677899999 99998 77888999
Q ss_pred cEEEEeCCCCce
Q psy14456 72 TVRFWDLRTRGC 83 (93)
Q Consensus 72 ~i~~~d~~~~~~ 83 (93)
.+++||+..+..
T Consensus 203 tVrlWd~~~~~~ 214 (588)
T 2j04_A 203 SVFSMTVSASSH 214 (588)
T ss_dssp CEEEECCCSSSS
T ss_pred eEEEEECCCCcc
Confidence 999999988763
No 122
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.50 E-value=1.3e-12 Score=76.87 Aligned_cols=81 Identities=33% Similarity=0.569 Sum_probs=69.6
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|.+.|.+++|++ +.+++++ .|+.|++||+.+++.+..+.+|...+.++ ++ +..+++++.|+.+.+||+++
T Consensus 158 h~~~v~~~~~~~------~~l~s~~-~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~ 228 (445)
T 2ovr_B 158 HTGGVWSSQMRD------NIIISGS-TDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIET 228 (445)
T ss_dssp CSSCEEEEEEET------TEEEEEE-TTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSS
T ss_pred CCCCEEEEEecC------CEEEEEe-CCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCC
Confidence 788899999973 4666666 69999999999999999999999999998 74 67899999999999999999
Q ss_pred CceeeEecCcc
Q psy14456 81 RGCTNVLTPIT 91 (93)
Q Consensus 81 ~~~~~~~~~~~ 91 (93)
++.+..+..|.
T Consensus 229 ~~~~~~~~~~~ 239 (445)
T 2ovr_B 229 GQCLHVLMGHV 239 (445)
T ss_dssp CCEEEEEECCS
T ss_pred CcEEEEEcCCc
Confidence 98888887664
No 123
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.48 E-value=7.7e-13 Score=76.21 Aligned_cols=67 Identities=15% Similarity=0.133 Sum_probs=57.2
Q ss_pred EEEe-eeCCCeEEEEeCCCCc----------------eeEEeeccccceEEE-EecCCCEEEEecCCCc-EEEEeCCCCc
Q psy14456 22 LISG-GAGDCKIYVTDCATGQ----------------AFQALSGHSGHVLSL-YNWGGATVLSGSHDRT-VRFWDLRTRG 82 (93)
Q Consensus 22 ~~~~-g~~~~~v~~~~~~~~~----------------~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~-i~~~d~~~~~ 82 (93)
++.+ |..++.|++||++++. .+..+.+|.+.|.++ |+|++.++++++.|+. +++||+++++
T Consensus 150 la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~ 229 (355)
T 3vu4_A 150 LVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV 229 (355)
T ss_dssp EEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCC
T ss_pred EEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc
Confidence 4443 5579999999998765 267788999999999 9999999999999998 9999999999
Q ss_pred eeeEec
Q psy14456 83 CTNVLT 88 (93)
Q Consensus 83 ~~~~~~ 88 (93)
++..+.
T Consensus 230 ~~~~~~ 235 (355)
T 3vu4_A 230 LVREFR 235 (355)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 998887
No 124
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.47 E-value=1.1e-12 Score=81.82 Aligned_cols=77 Identities=23% Similarity=0.296 Sum_probs=66.4
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCc--eeEEeeccccceEEE-EecC--CCEEEEecCCCcEEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQ--AFQALSGHSGHVLSL-YNWG--GATVLSGSHDRTVRFW 76 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~--~~~~~~~~~~~v~~~-~~~~--~~~~~s~~~~~~i~~~ 76 (93)
|++.|.+++|+|+.. ++.+++++ .||.|++||+.++. ....+.+|...+.++ |+|+ +..+++++.|+.+++|
T Consensus 52 h~~~V~~l~~s~~~~--~~~l~s~s-~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vw 128 (753)
T 3jro_A 52 HEGPVWRVDWAHPKF--GTILASCS-YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVV 128 (753)
T ss_dssp CSSCEEEEEECCTTS--CSEEEEEE-TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEE
T ss_pred CcCceEEEEecCCCC--CCEEEEEe-CCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEE
Confidence 788999999987621 35666666 69999999999886 567778899999999 9998 9999999999999999
Q ss_pred eCCCC
Q psy14456 77 DLRTR 81 (93)
Q Consensus 77 d~~~~ 81 (93)
|++++
T Consensus 129 dl~~~ 133 (753)
T 3jro_A 129 EFKEN 133 (753)
T ss_dssp ECCSS
T ss_pred EeecC
Confidence 99987
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.39 E-value=1.6e-11 Score=71.73 Aligned_cols=83 Identities=17% Similarity=0.021 Sum_probs=69.7
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEE-EecCCCcEEEEeCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVL-SGSHDRTVRFWDLR 79 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~-s~~~~~~i~~~d~~ 79 (93)
|.+.|.+++|+|+ +..+++++ .++.+++||+++++.+..+..|...+.++ |++++..++ ++..++.+.+||++
T Consensus 168 ~~~~v~~~~~~~~----~~~~~s~~-~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~ 242 (433)
T 3bws_A 168 KLGFVETISIPEH----NELWVSQM-QANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRK 242 (433)
T ss_dssp TCCEEEEEEEGGG----TEEEEEEG-GGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cCCceeEEEEcCC----CEEEEEEC-CCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECC
Confidence 5678999999887 66666665 69999999999999888888888899999 999988774 56689999999999
Q ss_pred CCceeeEecC
Q psy14456 80 TRGCTNVLTP 89 (93)
Q Consensus 80 ~~~~~~~~~~ 89 (93)
++.....+..
T Consensus 243 ~~~~~~~~~~ 252 (433)
T 3bws_A 243 TKLEIRKTDK 252 (433)
T ss_dssp TTEEEEECCC
T ss_pred CCcEEEEecC
Confidence 9887766644
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.36 E-value=3.7e-11 Score=69.35 Aligned_cols=82 Identities=12% Similarity=0.119 Sum_probs=66.0
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEE-EecCCCcEEEEeCCCC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVL-SGSHDRTVRFWDLRTR 81 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~-s~~~~~~i~~~d~~~~ 81 (93)
..+.+++|+|+ ++.++.++..++.|++||+.+++.+..+..+. .+.++ |++++..++ ++..++.+.+||+.++
T Consensus 32 ~~~~~~~~s~d----g~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~ 106 (391)
T 1l0q_A 32 SNPMGAVISPD----GTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN 106 (391)
T ss_dssp SSEEEEEECTT----SSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred CCcceEEECCC----CCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCC
Confidence 45889999998 67665555469999999999999888776554 78889 999988764 5667799999999999
Q ss_pred ceeeEecCc
Q psy14456 82 GCTNVLTPI 90 (93)
Q Consensus 82 ~~~~~~~~~ 90 (93)
+....+..+
T Consensus 107 ~~~~~~~~~ 115 (391)
T 1l0q_A 107 TVAGTVKTG 115 (391)
T ss_dssp EEEEEEECS
T ss_pred eEEEEEeCC
Confidence 887766543
No 127
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.33 E-value=1e-10 Score=67.57 Aligned_cols=83 Identities=12% Similarity=0.043 Sum_probs=67.4
Q ss_pred ccceeEEEEEecCCCCcceEEEeee--CCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEE-EEecCCCcEEEEeC
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGA--GDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATV-LSGSHDRTVRFWDL 78 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~--~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~-~s~~~~~~i~~~d~ 78 (93)
...+.+++|+|+ ++.+++++. .++.+.+||+.+++.+..+..+.. +..+ |++++..+ ++++.|+.+.+||+
T Consensus 199 ~~~~~~~~~~~~----g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~s~~~d~~v~v~d~ 273 (391)
T 1l0q_A 199 EAAPSGIAVNPE----GTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPD-PAGIAVTPDGKKVYVALSFXNTVSVIDT 273 (391)
T ss_dssp SSEEEEEEECTT----SSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSS-EEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred CCCccceEECCC----CCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCC-ccEEEEccCCCEEEEEcCCCCEEEEEEC
Confidence 456889999998 677777663 489999999999988887776554 5778 99998876 67789999999999
Q ss_pred CCCceeeEecCc
Q psy14456 79 RTRGCTNVLTPI 90 (93)
Q Consensus 79 ~~~~~~~~~~~~ 90 (93)
.+++.+..+..+
T Consensus 274 ~~~~~~~~~~~~ 285 (391)
T 1l0q_A 274 ATNTITATMAVG 285 (391)
T ss_dssp TTTEEEEEEECS
T ss_pred CCCcEEEEEECC
Confidence 999888777544
No 128
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.26 E-value=3.8e-11 Score=70.11 Aligned_cols=81 Identities=21% Similarity=0.229 Sum_probs=66.5
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeE-----EeeccccceEEE-EecCCCEEEEecCCCcEEEEeC
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQ-----ALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~-----~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~ 78 (93)
.+.+++|+|+ +..+++++ .++.|++||..+++... .+.+|...+.++ |++++.++++++.|+.+.+||+
T Consensus 124 ~~~~~~~s~~----~~~~~~~~-~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~ 198 (433)
T 3bws_A 124 QPKSVRFIDN----TRLAIPLL-EDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDL 198 (433)
T ss_dssp CBCCCEESSS----SEEEEEBT-TSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEET
T ss_pred CceEEEEeCC----CeEEEEeC-CCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEEC
Confidence 4568889885 56666655 68999999999988776 345788899999 9999999999999999999999
Q ss_pred CCCceeeEecCc
Q psy14456 79 RTRGCTNVLTPI 90 (93)
Q Consensus 79 ~~~~~~~~~~~~ 90 (93)
++++....+..+
T Consensus 199 ~~~~~~~~~~~~ 210 (433)
T 3bws_A 199 KTLAYKATVDLT 210 (433)
T ss_dssp TTCCEEEEEECS
T ss_pred CCceEEEEEcCC
Confidence 998887777543
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.21 E-value=8.7e-10 Score=64.84 Aligned_cols=76 Identities=13% Similarity=0.113 Sum_probs=60.9
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCC---CeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEE-EecCCC--cEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGD---CKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVL-SGSHDR--TVR 74 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~---~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~-s~~~~~--~i~ 74 (93)
|.+.+.+++|+|+ ++.++.++. + ..|++||+.+++.. .+..+...+.++ |+|++..++ +++.++ .|.
T Consensus 177 ~~~~v~~~~~Spd----g~~la~~s~-~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~ 250 (415)
T 2hqs_A 177 SPQPLMSPAWSPD----GSKLAYVTF-ESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLY 250 (415)
T ss_dssp ESSCEEEEEECTT----SSEEEEEEC-TTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEE
T ss_pred CCCcceeeEEcCC----CCEEEEEEe-cCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEE
Confidence 5678999999999 777777663 5 49999999988765 466677888899 999999777 666554 499
Q ss_pred EEeCCCCce
Q psy14456 75 FWDLRTRGC 83 (93)
Q Consensus 75 ~~d~~~~~~ 83 (93)
+||+++++.
T Consensus 251 ~~d~~~~~~ 259 (415)
T 2hqs_A 251 VMDLASGQI 259 (415)
T ss_dssp EEETTTCCE
T ss_pred EEECCCCCE
Confidence 999988765
No 130
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.05 E-value=2.5e-09 Score=68.85 Aligned_cols=81 Identities=12% Similarity=0.134 Sum_probs=66.0
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCC----------
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHD---------- 70 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~---------- 70 (93)
|...+..++|+|+ ++.++.++ .++.+++||+.+++......+|...+..+ |+|+++.++.++.+
T Consensus 377 ~~~~~~~~~~SpD----G~~la~~~-~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~ 451 (1045)
T 1k32_A 377 NLGNVFAMGVDRN----GKFAVVAN-DRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVM 451 (1045)
T ss_dssp CCCSEEEEEECTT----SSEEEEEE-TTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCE
T ss_pred CccceeeeEECCC----CCEEEEEC-CCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCC
Confidence 4567899999999 78888776 58999999999998877776888888888 99999988877654
Q ss_pred CcEEEEeCCCCceeeEec
Q psy14456 71 RTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 71 ~~i~~~d~~~~~~~~~~~ 88 (93)
..+.+||+.++. ...+.
T Consensus 452 ~~i~l~d~~~g~-~~~l~ 468 (1045)
T 1k32_A 452 QAIHVYDMEGRK-IFAAT 468 (1045)
T ss_dssp EEEEEEETTTTE-EEECS
T ss_pred CeEEEEECCCCc-EEEee
Confidence 489999998876 44443
No 131
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.03 E-value=9.4e-09 Score=57.99 Aligned_cols=77 Identities=10% Similarity=-0.012 Sum_probs=62.0
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCce
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGC 83 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~ 83 (93)
.+..++|+|+ ++.++++ ++.|.+||+.+++.+..+... ..+..+ |++++..+++++.++.+.+||+.+++.
T Consensus 242 ~~~~~~~s~d----g~~l~~~---~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~ 313 (337)
T 1pby_B 242 FYFSTAVNPA----KTRAFGA---YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEK 313 (337)
T ss_dssp CEEEEEECTT----SSEEEEE---ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCE
T ss_pred ceeeEEECCC----CCEEEEe---CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEECcCCcE
Confidence 4567899998 6776665 689999999998877766533 445678 999999888888899999999999988
Q ss_pred eeEecC
Q psy14456 84 TNVLTP 89 (93)
Q Consensus 84 ~~~~~~ 89 (93)
+..+..
T Consensus 314 ~~~~~~ 319 (337)
T 1pby_B 314 KGQVDL 319 (337)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 877754
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.02 E-value=1.2e-08 Score=60.11 Aligned_cols=77 Identities=16% Similarity=0.078 Sum_probs=58.6
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCC--eEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecC-CC--cEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDC--KIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSH-DR--TVRF 75 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~--~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~-~~--~i~~ 75 (93)
|.+.+.+++|+|+ ++.++.+++.++ .|.+||+.+++. ..+..|...+..+ |+|+++.++.++. ++ .+.+
T Consensus 221 ~~~~~~~~~~spd----g~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~ 295 (415)
T 2hqs_A 221 FPRHNGAPAFSPD----GSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYK 295 (415)
T ss_dssp CSSCEEEEEECTT----SSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred CCCcccCEEEcCC----CCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEE
Confidence 4567899999999 677774443454 499999988775 5566788888899 9999998887664 44 6777
Q ss_pred EeCCCCce
Q psy14456 76 WDLRTRGC 83 (93)
Q Consensus 76 ~d~~~~~~ 83 (93)
||+.++..
T Consensus 296 ~d~~~~~~ 303 (415)
T 2hqs_A 296 VNINGGAP 303 (415)
T ss_dssp EETTSSCC
T ss_pred EECCCCCE
Confidence 89887754
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.00 E-value=1.5e-08 Score=61.65 Aligned_cols=78 Identities=13% Similarity=0.075 Sum_probs=65.2
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeC--CCCceeEEeeccccceEEE-Eec----CCCEEEEec-CCCcEEEEe
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDC--ATGQAFQALSGHSGHVLSL-YNW----GGATVLSGS-HDRTVRFWD 77 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~~~~~~~~~v~~~-~~~----~~~~~~s~~-~~~~i~~~d 77 (93)
+..++|+|+ ++++++++ .++.|.+||+ .+++++..+.. ......+ |+| +++++++++ .++.+.+||
T Consensus 181 ~~~v~~spd----g~~l~v~~-~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D 254 (543)
T 1nir_A 181 VHISRMSAS----GRYLLVIG-RDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMD 254 (543)
T ss_dssp EEEEEECTT----SCEEEEEE-TTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEE
T ss_pred cceEEECCC----CCEEEEEC-CCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEe
Confidence 778899999 78888876 5899999999 78888887764 4456788 999 999998887 589999999
Q ss_pred CCCCceeeEecC
Q psy14456 78 LRTRGCTNVLTP 89 (93)
Q Consensus 78 ~~~~~~~~~~~~ 89 (93)
..++++++.+..
T Consensus 255 ~~t~~~~~~i~~ 266 (543)
T 1nir_A 255 GETLEPKQIVST 266 (543)
T ss_dssp TTTCCEEEEEEC
T ss_pred ccccccceeecc
Confidence 999988877753
No 134
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.98 E-value=1.8e-08 Score=56.99 Aligned_cols=81 Identities=6% Similarity=0.007 Sum_probs=61.7
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCce-eEEeeccccceEEE-EecCCCEEEEecCCC---cEEEEeC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQA-FQALSGHSGHVLSL-YNWGGATVLSGSHDR---TVRFWDL 78 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~---~i~~~d~ 78 (93)
..+ .++|+|+ ++.+++++..++.|.+||..++.. ...+..+.....++ |++++..+++...++ .+.+||+
T Consensus 41 ~~~-~~~~s~d----g~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~ 115 (331)
T 3u4y_A 41 DFV-DTAITSD----CSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSF 115 (331)
T ss_dssp CEE-EEEECSS----SCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEET
T ss_pred Ccc-eEEEcCC----CCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEEC
Confidence 445 8999998 666666654588999999999887 66666565555547 999999888555553 8999999
Q ss_pred CCCceeeEecC
Q psy14456 79 RTRGCTNVLTP 89 (93)
Q Consensus 79 ~~~~~~~~~~~ 89 (93)
.+++.+..+..
T Consensus 116 ~~~~~~~~~~~ 126 (331)
T 3u4y_A 116 LKNKFISTIPI 126 (331)
T ss_dssp TTTEEEEEEEC
T ss_pred CCCCeEEEEEC
Confidence 99887776654
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.98 E-value=6e-09 Score=57.57 Aligned_cols=78 Identities=12% Similarity=0.085 Sum_probs=60.8
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCC-CCceeEEeeccccceEEE-EecCCCEEEEecCC---------
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCA-TGQAFQALSGHSGHVLSL-YNWGGATVLSGSHD--------- 70 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~--------- 70 (93)
|...+.+++|+|+ ++.++.++..++.+.+|+++ .+.....+..+...+..+ |+|++..++.++.+
T Consensus 171 ~~~~~~~~~~s~d----g~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~ 246 (297)
T 2ojh_A 171 GEGRNDGPDYSPD----GRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRD 246 (297)
T ss_dssp SSSCEEEEEECTT----SSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSS
T ss_pred CCCccccceECCC----CCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCccccc
Confidence 4467899999998 67676665458899999876 455566777777788888 99999988877654
Q ss_pred --CcEEEEeCCCCce
Q psy14456 71 --RTVRFWDLRTRGC 83 (93)
Q Consensus 71 --~~i~~~d~~~~~~ 83 (93)
..+.+||+.+++.
T Consensus 247 ~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 247 LDVRVQLMDMDGGNV 261 (297)
T ss_dssp EEEEEEEEETTSCSC
T ss_pred CceEEEEEecCCCCc
Confidence 5699999988765
No 136
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.89 E-value=2e-08 Score=61.11 Aligned_cols=73 Identities=11% Similarity=0.058 Sum_probs=58.5
Q ss_pred EEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeC--CCCceeeEe
Q psy14456 11 FIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDL--RTRGCTNVL 87 (93)
Q Consensus 11 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~--~~~~~~~~~ 87 (93)
++|+ +..+++. ..++.|.+||..+++++..+..... +..+ |+|+++.+++++.|+.|.+||+ .+++++..+
T Consensus 145 ~~p~----~~~~vs~-~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i 218 (543)
T 1nir_A 145 LDLP----NLFSVTL-RDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEI 218 (543)
T ss_dssp CCGG----GEEEEEE-GGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEE
T ss_pred cCCC----CEEEEEE-cCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEE
Confidence 5665 5555554 4699999999999999888873333 6788 9999999999999999999999 788777766
Q ss_pred cC
Q psy14456 88 TP 89 (93)
Q Consensus 88 ~~ 89 (93)
..
T Consensus 219 ~~ 220 (543)
T 1nir_A 219 KI 220 (543)
T ss_dssp EC
T ss_pred ec
Confidence 53
No 137
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.88 E-value=6.1e-08 Score=55.29 Aligned_cols=76 Identities=13% Similarity=0.142 Sum_probs=54.9
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC---ceeEEeeccccceEEE-EecCCCEEEEec-CCCcEEEE--e
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG---QAFQALSGHSGHVLSL-YNWGGATVLSGS-HDRTVRFW--D 77 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~---~~~~~~~~~~~~v~~~-~~~~~~~~~s~~-~~~~i~~~--d 77 (93)
.+..++|+|+ ++.++.++..++.|.+|++... ..+..+..+...+..+ |+|+++.+++++ .++.+.+| |
T Consensus 241 ~~~~i~~spd----G~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 241 GAAAIRLSHD----GHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp EEEEEEECTT----SCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred cceeEEECCC----CCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 4778999999 6766555546899999998732 3444555555567788 999999877666 45899999 5
Q ss_pred CCCCcee
Q psy14456 78 LRTRGCT 84 (93)
Q Consensus 78 ~~~~~~~ 84 (93)
..+++..
T Consensus 317 ~~tg~l~ 323 (347)
T 3hfq_A 317 LTSGKLS 323 (347)
T ss_dssp TTTCCEE
T ss_pred CCCCeEE
Confidence 5566543
No 138
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.88 E-value=4.3e-08 Score=59.59 Aligned_cols=76 Identities=13% Similarity=0.038 Sum_probs=61.0
Q ss_pred eEEEEEecCCCCcceEEEeeeCC----CeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCC--cEEEEeCC
Q psy14456 7 RDVCFIEDTSNKSSLLISGGAGD----CKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDR--TVRFWDLR 79 (93)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~g~~~----~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~--~i~~~d~~ 79 (93)
..++|+|+ ++.++.++. + ..|.+||+.+++.. .+..+...+... |+|+++.+++...++ .|.+||+.
T Consensus 153 ~~~~~spD----G~~la~~~~-~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~ 226 (582)
T 3o4h_A 153 FGFVSDIR----GDLIAGLGF-FGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPR 226 (582)
T ss_dssp CEEEEEEE----TTEEEEEEE-EETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTT
T ss_pred ceEEECCC----CCEEEEEEE-cCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCC
Confidence 57889999 788886653 4 67999999888754 567788888888 999999999877888 89999999
Q ss_pred CCceeeEecC
Q psy14456 80 TRGCTNVLTP 89 (93)
Q Consensus 80 ~~~~~~~~~~ 89 (93)
+++.. .+..
T Consensus 227 ~~~~~-~~~~ 235 (582)
T 3o4h_A 227 DGSVE-DLEL 235 (582)
T ss_dssp TCCEE-ECCC
T ss_pred CCcEE-EccC
Confidence 88766 4443
No 139
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.88 E-value=7.3e-08 Score=54.78 Aligned_cols=79 Identities=13% Similarity=0.115 Sum_probs=63.3
Q ss_pred eeEEEEEecCCCCcceEEEee-eCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCce
Q psy14456 6 VRDVCFIEDTSNKSSLLISGG-AGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGC 83 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g-~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~ 83 (93)
+.++.|+|+ ++.++.++ ..++.|.+||..+++.+..+..+...+..+ |++++..++.++.++.+.+||..+++.
T Consensus 143 ~~~~~~s~d----g~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~ 218 (353)
T 3vgz_A 143 PRELVADDA----TNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKI 218 (353)
T ss_dssp EEEEEEETT----TTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEE
T ss_pred CceEEECCC----CCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeE
Confidence 678999998 56555544 348899999999998888776455556777 999999998888899999999999887
Q ss_pred eeEec
Q psy14456 84 TNVLT 88 (93)
Q Consensus 84 ~~~~~ 88 (93)
...+.
T Consensus 219 ~~~~~ 223 (353)
T 3vgz_A 219 LSRKK 223 (353)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76654
No 140
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.87 E-value=5.6e-08 Score=55.10 Aligned_cols=76 Identities=8% Similarity=-0.008 Sum_probs=59.8
Q ss_pred ceeEEEEEe-cCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCc
Q psy14456 5 TVRDVCFIE-DTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRG 82 (93)
Q Consensus 5 ~v~~~~~~~-~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~ 82 (93)
.+..++|+| + ++.++++ ++.|.+||+.+++.+..+.. ...+..+ |++++..+++++.++.+.+||..+++
T Consensus 256 ~~~~~~~sp~d----g~~l~~~---~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 256 LYFTGLRSPKD----PNQIYGV---LNRLAKYDLKQRKLIKAANL-DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLE 327 (349)
T ss_dssp CEEEEEECSSC----TTEEEEE---ESEEEEEETTTTEEEEEEEC-SSCCCEEEECSSSSCEEEESBSSEEEEEETTTTE
T ss_pred cceeeEecCCC----CCEEEEE---cCeEEEEECccCeEEEEEcC-CCCccceEECCCCCEEEEecCCCeEEEEeccccc
Confidence 466788888 7 6666665 68999999999888776653 2345678 99998877777888999999999988
Q ss_pred eeeEec
Q psy14456 83 CTNVLT 88 (93)
Q Consensus 83 ~~~~~~ 88 (93)
.+..+.
T Consensus 328 ~~~~~~ 333 (349)
T 1jmx_B 328 KVKNIK 333 (349)
T ss_dssp EEEEEE
T ss_pred eeeeee
Confidence 877764
No 141
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.85 E-value=3.1e-08 Score=56.00 Aligned_cols=73 Identities=18% Similarity=0.194 Sum_probs=53.0
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCC--CCce--eEEeeccccceEEE-EecCCCEEEEec-CCCcEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCA--TGQA--FQALSGHSGHVLSL-YNWGGATVLSGS-HDRTVRF 75 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~--~~~~--~~~~~~~~~~v~~~-~~~~~~~~~s~~-~~~~i~~ 75 (93)
|...+.+++|+|+ ++.+++++..++.+.+|+++ ++.. +..+..+. .+..+ |++++..++.++ .++.+.+
T Consensus 36 ~~~~~~~~~~spd----g~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~ 110 (343)
T 1ri6_A 36 VPGQVQPMVVSPD----KRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSV 110 (343)
T ss_dssp CSSCCCCEEECTT----SSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEE
T ss_pred cCCCCceEEECCC----CCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEE
Confidence 3456788999998 67777776434999999987 5543 33444333 66778 999998776554 5889999
Q ss_pred EeCC
Q psy14456 76 WDLR 79 (93)
Q Consensus 76 ~d~~ 79 (93)
||+.
T Consensus 111 ~d~~ 114 (343)
T 1ri6_A 111 TRLE 114 (343)
T ss_dssp EEEE
T ss_pred EECC
Confidence 9994
No 142
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.84 E-value=1.7e-07 Score=53.30 Aligned_cols=80 Identities=9% Similarity=0.151 Sum_probs=60.1
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEE-EEecCCCcEEEEeCCCC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATV-LSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~-~s~~~~~~i~~~d~~~~ 81 (93)
..+..++|+|+ ++.++.++..++.+.+||..+++.+..+..... ..+ |++++..+ ++...++.+.+||..++
T Consensus 231 ~~~~~~~~s~d----g~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~ 304 (353)
T 3vgz_A 231 HFFINISLDTA----RQRAFITDSKAAEVLVVDTRNGNILAKVAAPES--LAVLFNPARNEAYVTHRQAGKVSVIDAKSY 304 (353)
T ss_dssp CCEEEEEEETT----TTEEEEEESSSSEEEEEETTTCCEEEEEECSSC--CCEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred cccceEEECCC----CCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC--ceEEECCCCCEEEEEECCCCeEEEEECCCC
Confidence 34677999998 666666554579999999999988777654332 456 89998855 45557899999999998
Q ss_pred ceeeEecC
Q psy14456 82 GCTNVLTP 89 (93)
Q Consensus 82 ~~~~~~~~ 89 (93)
+.+..+..
T Consensus 305 ~~~~~~~~ 312 (353)
T 3vgz_A 305 KVVKTFDT 312 (353)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEec
Confidence 87766643
No 143
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.84 E-value=3.9e-08 Score=61.04 Aligned_cols=74 Identities=14% Similarity=0.137 Sum_probs=58.6
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCC-----eEEEEeCCCCceeEEeecccc------------------------ce
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDC-----KIYVTDCATGQAFQALSGHSG------------------------HV 53 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~-----~v~~~~~~~~~~~~~~~~~~~------------------------~v 53 (93)
...+..++|+|+ ++.++.++..++ .|.+||+.+++....+..+.. .+
T Consensus 36 ~~~~~~~~~Spd----G~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 111 (741)
T 2ecf_A 36 GPTLMKPKVAPD----GSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGI 111 (741)
T ss_dssp CCCCEEEEECTT----SSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEES
T ss_pred CCCCCCceEecC----CCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCc
Confidence 356899999999 788887763377 899999999887665544332 26
Q ss_pred EEE-EecCCCEEEEecCCCcEEEEeCCCC
Q psy14456 54 LSL-YNWGGATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 54 ~~~-~~~~~~~~~s~~~~~~i~~~d~~~~ 81 (93)
..+ |+|+++.+++++. +.+.+||+.++
T Consensus 112 ~~~~~SpDg~~l~~~~~-~~i~~~d~~~~ 139 (741)
T 2ecf_A 112 VDYQWSPDAQRLLFPLG-GELYLYDLKQE 139 (741)
T ss_dssp CCCEECTTSSEEEEEET-TEEEEEESSSC
T ss_pred ceeEECCCCCEEEEEeC-CcEEEEECCCC
Confidence 777 9999999988775 99999999887
No 144
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.82 E-value=7.6e-08 Score=54.25 Aligned_cols=80 Identities=11% Similarity=0.060 Sum_probs=60.5
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeec-c----ccceEEE-EecCCCEEEEec----------
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSG-H----SGHVLSL-YNWGGATVLSGS---------- 68 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~-~----~~~v~~~-~~~~~~~~~s~~---------- 68 (93)
.+..++|+|+ ++.++.++..++.|.+||+.+++.+..+.. + ...+..+ |++++..++.+.
T Consensus 35 ~~~~~~~s~d----g~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~ 110 (337)
T 1pby_B 35 TPMVPMVAPG----GRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHF 110 (337)
T ss_dssp CCCCEEECTT----SSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCE
T ss_pred CccceEEcCC----CCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccc
Confidence 4778999998 666555554689999999999887766642 2 1245677 999998887775
Q ss_pred --CCCcEEEEeCCCCceeeEec
Q psy14456 69 --HDRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 69 --~~~~i~~~d~~~~~~~~~~~ 88 (93)
.++.+.+||+.+++....+.
T Consensus 111 ~~~~~~i~v~d~~~~~~~~~~~ 132 (337)
T 1pby_B 111 EVQPTRVALYDAETLSRRKAFE 132 (337)
T ss_dssp EECCCEEEEEETTTTEEEEEEE
T ss_pred cccCceEEEEECCCCcEEEEEe
Confidence 57999999999887766654
No 145
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.79 E-value=7.1e-08 Score=53.25 Aligned_cols=75 Identities=9% Similarity=-0.028 Sum_probs=55.1
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC-CceeEEeeccc-cceEEE-EecCCCEEEEec--CCCcEEEE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT-GQAFQALSGHS-GHVLSL-YNWGGATVLSGS--HDRTVRFW 76 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~~~~~~~~-~~v~~~-~~~~~~~~~s~~--~~~~i~~~ 76 (93)
|.+.|.+++|+|+ ++.+++++ ++.|.+||+.+ ++.......+. ..+.++ |+|++..++++. .++...+|
T Consensus 40 ~~~~v~~~~~spd----g~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~ 113 (297)
T 2ojh_A 40 TPELFEAPNWSPD----GKYLLLNS--EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIY 113 (297)
T ss_dssp ESSCCEEEEECTT----SSEEEEEE--TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEE
T ss_pred CCcceEeeEECCC----CCEEEEEc--CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEE
Confidence 4577999999999 67777653 88999999998 77766555553 567778 999999998887 33445555
Q ss_pred --eCCCCc
Q psy14456 77 --DLRTRG 82 (93)
Q Consensus 77 --d~~~~~ 82 (93)
+..++.
T Consensus 114 ~~~~~~~~ 121 (297)
T 2ojh_A 114 LLPSTGGT 121 (297)
T ss_dssp EEETTCCC
T ss_pred EEECCCCc
Confidence 544443
No 146
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.76 E-value=3.3e-07 Score=51.74 Aligned_cols=73 Identities=8% Similarity=0.028 Sum_probs=51.8
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCC--CC--ceeEEeeccccceEEE-EecCCCEEEEec-CCCcEEEE--
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCA--TG--QAFQALSGHSGHVLSL-YNWGGATVLSGS-HDRTVRFW-- 76 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~--~~--~~~~~~~~~~~~v~~~-~~~~~~~~~s~~-~~~~i~~~-- 76 (93)
.+..++|+|+ ++.++.++..++.+.+|++. .+ ..+..+..+.. +..+ |++++..+++++ .++.+.+|
T Consensus 232 ~~~~i~~s~d----g~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~ 306 (343)
T 1ri6_A 232 WAADIHITPD----GRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEI 306 (343)
T ss_dssp CEEEEEECTT----SSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEE
T ss_pred CccceEECCC----CCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEE
Confidence 4557999998 66666555468999999998 33 33444444433 6778 999999777666 68999999
Q ss_pred eCCCCc
Q psy14456 77 DLRTRG 82 (93)
Q Consensus 77 d~~~~~ 82 (93)
|..++.
T Consensus 307 d~~~g~ 312 (343)
T 1ri6_A 307 VGEQGL 312 (343)
T ss_dssp ETTTTE
T ss_pred cCCCce
Confidence 444553
No 147
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.75 E-value=8.4e-08 Score=59.59 Aligned_cols=76 Identities=17% Similarity=0.132 Sum_probs=60.6
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCc--eeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCC
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQ--AFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~--~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~ 81 (93)
.|..++|+|+ ++.++.++ ++.|.+||+.++. ....+..+...+..+ |+|+++.++.++ ++.|.+||+.++
T Consensus 110 ~v~~~~~SpD----g~~l~~~~--~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g 182 (741)
T 2ecf_A 110 GIVDYQWSPD----AQRLLFPL--GGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASG 182 (741)
T ss_dssp ESCCCEECTT----SSEEEEEE--TTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTT
T ss_pred CcceeEECCC----CCEEEEEe--CCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCC
Confidence 4789999999 78777765 4999999998873 344566677788889 999999998876 468999999987
Q ss_pred ceeeEe
Q psy14456 82 GCTNVL 87 (93)
Q Consensus 82 ~~~~~~ 87 (93)
...+..
T Consensus 183 ~~~~~~ 188 (741)
T 2ecf_A 183 RQMQLT 188 (741)
T ss_dssp EEEECC
T ss_pred CEEEec
Confidence 665443
No 148
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.73 E-value=6.4e-07 Score=51.94 Aligned_cols=72 Identities=18% Similarity=0.190 Sum_probs=57.3
Q ss_pred EEEEecCCCCcceEEEeee----------CCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEe
Q psy14456 9 VCFIEDTSNKSSLLISGGA----------GDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 9 ~~~~~~~~~~~~~~~~~g~----------~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d 77 (93)
++|+|+ ++.++.+.. ....|.+||+.+++.+..+..+. ...+ |+|+++.+++++. +.+.+||
T Consensus 259 ~a~~~d----g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D 331 (361)
T 2oiz_A 259 VGLHRA----SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYD 331 (361)
T ss_dssp EEEETT----TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEE
T ss_pred EEEecC----CCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEE
Confidence 577777 455554432 13489999999999999887766 7888 9999998888876 9999999
Q ss_pred CCCC--ceeeEe
Q psy14456 78 LRTR--GCTNVL 87 (93)
Q Consensus 78 ~~~~--~~~~~~ 87 (93)
..++ +.+..+
T Consensus 332 ~~t~~l~~~~~i 343 (361)
T 2oiz_A 332 ISQPEPKLLRTI 343 (361)
T ss_dssp CSSSSCEEEEEE
T ss_pred CCCCcceeeEEe
Confidence 9999 888776
No 149
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.73 E-value=8.9e-08 Score=55.23 Aligned_cols=75 Identities=27% Similarity=0.264 Sum_probs=57.5
Q ss_pred EEEEecCCCCcceEEEeeeCCC--eEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceee
Q psy14456 9 VCFIEDTSNKSSLLISGGAGDC--KIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTN 85 (93)
Q Consensus 9 ~~~~~~~~~~~~~~~~~g~~~~--~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~ 85 (93)
.+|+|+ ++.++.....++ .|.+||+.+++......++...+... |+|++..++....++.+.+||+.+++...
T Consensus 41 ~~~SpD----g~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~ 116 (388)
T 3pe7_A 41 KCFTRD----GSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENV 116 (388)
T ss_dssp CCBCTT----SCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEE
T ss_pred ccCCCC----CCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCccee
Confidence 779999 677776664466 48888988888766555565555455 99999999999888999999999887654
Q ss_pred Ee
Q psy14456 86 VL 87 (93)
Q Consensus 86 ~~ 87 (93)
.+
T Consensus 117 ~~ 118 (388)
T 3pe7_A 117 VY 118 (388)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 150
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.72 E-value=4.3e-07 Score=51.33 Aligned_cols=70 Identities=10% Similarity=-0.053 Sum_probs=51.9
Q ss_pred cceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEe-cCCCcEEEEeCCCCce-eeEecC
Q psy14456 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSG-SHDRTVRFWDLRTRGC-TNVLTP 89 (93)
Q Consensus 19 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~-~~~~~i~~~d~~~~~~-~~~~~~ 89 (93)
...++.++..++.|.+||..+++....+..+.... .+ |++++..++.+ ..++.+.+||..++.. ...+..
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc
Confidence 44544444469999999999998877776555555 88 99999866544 4588999999998876 555543
No 151
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.69 E-value=7.5e-08 Score=54.58 Aligned_cols=74 Identities=12% Similarity=-0.007 Sum_probs=55.7
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccc------cceEEE-EecCCCEEEEecCC-------
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHS------GHVLSL-YNWGGATVLSGSHD------- 70 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~------~~v~~~-~~~~~~~~~s~~~~------- 70 (93)
.+..++|+|+ ++.++.++..++.|.+||+.+++.+..+.... ..+..+ |+|+++.+++++.+
T Consensus 44 ~~~~~~~s~d----g~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~ 119 (349)
T 1jmx_B 44 GPGTAMMAPD----NRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDH 119 (349)
T ss_dssp SSCEEEECTT----SSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSC
T ss_pred CCceeEECCC----CCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccc
Confidence 4678899998 66555555468999999999988776665322 235677 99999988887754
Q ss_pred -----CcEEEEeCCCCc
Q psy14456 71 -----RTVRFWDLRTRG 82 (93)
Q Consensus 71 -----~~i~~~d~~~~~ 82 (93)
+.+.+||+.+++
T Consensus 120 ~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 120 YVVKPPRLEVFSTADGL 136 (349)
T ss_dssp EEECCCEEEEEEGGGGG
T ss_pred cccCCCeEEEEECCCcc
Confidence 899999998754
No 152
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.69 E-value=9.4e-08 Score=59.19 Aligned_cols=79 Identities=13% Similarity=0.087 Sum_probs=57.7
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccce------------------EEE-EecCCCEE
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHV------------------LSL-YNWGGATV 64 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v------------------~~~-~~~~~~~~ 64 (93)
..+..++|+|+ ++.++.+. ++.|.+|++.++........+...+ ..+ |+|+++.+
T Consensus 114 ~~~~~~~~SPd----G~~la~~~--~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~l 187 (723)
T 1xfd_A 114 AKLQYAGWGPK----GQQLIFIF--ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRL 187 (723)
T ss_dssp CCCSBCCBCSS----TTCEEEEE--TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEE
T ss_pred ccccccEECCC----CCEEEEEE--CCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEE
Confidence 34788999999 77777764 5899999999887765554433322 678 99999999
Q ss_pred EEecCCC----------------------------------cEEEEeCCCCceeeEec
Q psy14456 65 LSGSHDR----------------------------------TVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 65 ~s~~~~~----------------------------------~i~~~d~~~~~~~~~~~ 88 (93)
+.++.+. .+.+||+.++.....+.
T Consensus 188 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~ 245 (723)
T 1xfd_A 188 AYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMM 245 (723)
T ss_dssp EEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECC
T ss_pred EEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEee
Confidence 8776432 78999998877544443
No 153
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.63 E-value=4.1e-07 Score=56.35 Aligned_cols=74 Identities=14% Similarity=0.111 Sum_probs=56.5
Q ss_pred eeEEEEEecCCCCcceEEEeee--------------------------------CCCeEEEEeCCCCceeEEee--cccc
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGA--------------------------------GDCKIYVTDCATGQAFQALS--GHSG 51 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~--------------------------------~~~~v~~~~~~~~~~~~~~~--~~~~ 51 (93)
+.++.|+|+ ++.++.+.. .+..|.+||+.++....... .+..
T Consensus 183 ~~~~~~SpD----g~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 258 (706)
T 2z3z_A 183 EKGTFWSPK----GSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEK 258 (706)
T ss_dssp CCSEEECTT----SSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTC
T ss_pred CceEEECCC----CCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCce
Confidence 588999999 777776641 24679999999887654332 4566
Q ss_pred ceEEE-EecCCCEEEEecCCC-----cEEEEeCCCCce
Q psy14456 52 HVLSL-YNWGGATVLSGSHDR-----TVRFWDLRTRGC 83 (93)
Q Consensus 52 ~v~~~-~~~~~~~~~s~~~~~-----~i~~~d~~~~~~ 83 (93)
.+..+ |+|+++.+++++.++ .+.+||..++..
T Consensus 259 ~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~ 296 (706)
T 2z3z_A 259 FLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRF 296 (706)
T ss_dssp EEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCE
T ss_pred eEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCce
Confidence 78888 999999888876665 899999998833
No 154
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.63 E-value=3.7e-08 Score=60.98 Aligned_cols=73 Identities=7% Similarity=0.012 Sum_probs=58.2
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeecccc---ceEEE-EecCCCEEEEecCC---------C
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSG---HVLSL-YNWGGATVLSGSHD---------R 71 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~---~v~~~-~~~~~~~~~s~~~~---------~ 71 (93)
....++|+|+ ++++++ + .++.+++||+.+++....+..+.. .+..+ |+|+++.+++++.+ +
T Consensus 18 ~~~~~~~spd----g~~~~~-~-~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~ 91 (723)
T 1xfd_A 18 HDPEAKWISD----TEFIYR-E-QKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTG 91 (723)
T ss_dssp CCCCCCBSSS----SCBCCC-C-SSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCS
T ss_pred cccccEEcCC----CcEEEE-e-CCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeeccee
Confidence 4677899998 665544 4 599999999999988777766654 37888 99999999888654 6
Q ss_pred cEEEEeCCCCce
Q psy14456 72 TVRFWDLRTRGC 83 (93)
Q Consensus 72 ~i~~~d~~~~~~ 83 (93)
.+.+||+.++..
T Consensus 92 ~i~~~d~~~~~~ 103 (723)
T 1xfd_A 92 YYVLSKIPHGDP 103 (723)
T ss_dssp EEEEEESSSCCC
T ss_pred eEEEEECCCCce
Confidence 788999998865
No 155
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.62 E-value=1.1e-06 Score=50.15 Aligned_cols=76 Identities=12% Similarity=0.052 Sum_probs=53.3
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC-Cc--eeEEeecc---------ccceEEE-EecCCCEEEEecC
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT-GQ--AFQALSGH---------SGHVLSL-YNWGGATVLSGSH 69 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~--~~~~~~~~---------~~~v~~~-~~~~~~~~~s~~~ 69 (93)
...+..++|+|+ ++.+++++..++.+.+|++.. +. .+..+... ...+..+ |+|+++++++...
T Consensus 85 ~~~p~~~a~spd----g~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~ 160 (347)
T 3hfq_A 85 GTPPAYVAVDEA----RQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG 160 (347)
T ss_dssp SCCCSEEEEETT----TTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT
T ss_pred CCCCEEEEECCC----CCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC
Confidence 346778999999 677777664589999999863 22 22333211 1236678 9999996677777
Q ss_pred CCcEEEEeCC-CCc
Q psy14456 70 DRTVRFWDLR-TRG 82 (93)
Q Consensus 70 ~~~i~~~d~~-~~~ 82 (93)
++.+.+|++. ++.
T Consensus 161 ~~~v~~~~~~~~g~ 174 (347)
T 3hfq_A 161 SDKVYVYNVSDAGQ 174 (347)
T ss_dssp TTEEEEEEECTTSC
T ss_pred CCEEEEEEECCCCc
Confidence 8899999998 443
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.61 E-value=1.8e-06 Score=49.56 Aligned_cols=75 Identities=16% Similarity=0.096 Sum_probs=52.9
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCce------e------EE-eeccccceEEE-EecCCCEEEEec-C
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQA------F------QA-LSGHSGHVLSL-YNWGGATVLSGS-H 69 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~------~------~~-~~~~~~~v~~~-~~~~~~~~~s~~-~ 69 (93)
.+.+++|+|+ ++.++.++..++.+.+|+++.... + .. ..........+ |+|+++.++..+ .
T Consensus 156 ~~~~~~~spd----g~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~ 231 (361)
T 3scy_A 156 HLHCVRITPD----GKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI 231 (361)
T ss_dssp CEEEEEECTT----SSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT
T ss_pred cceEEEECCC----CCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC
Confidence 3577999999 676666665689999998775431 1 11 12334456778 999998776655 7
Q ss_pred CCcEEEEeCCCCce
Q psy14456 70 DRTVRFWDLRTRGC 83 (93)
Q Consensus 70 ~~~i~~~d~~~~~~ 83 (93)
++.+.+|++.++..
T Consensus 232 ~~~v~v~~~~~g~~ 245 (361)
T 3scy_A 232 GGTVIAFRYADGML 245 (361)
T ss_dssp TCEEEEEEEETTEE
T ss_pred CCeEEEEEecCCce
Confidence 89999999986643
No 157
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.61 E-value=1.2e-06 Score=50.21 Aligned_cols=76 Identities=13% Similarity=0.104 Sum_probs=53.0
Q ss_pred ceeEEEEEecCCCCcceEEEeeeC-CCeEEEEeCC--CCc--eeEEeeccccceEEE-EecCCCEEEEec-CCCcEEEE-
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAG-DCKIYVTDCA--TGQ--AFQALSGHSGHVLSL-YNWGGATVLSGS-HDRTVRFW- 76 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~-~~~v~~~~~~--~~~--~~~~~~~~~~~v~~~-~~~~~~~~~s~~-~~~~i~~~- 76 (93)
....++|+|+ +++++++... ++.+.+|+++ ++. .+..+.. ...+..+ |+|+++++++++ .++.+.+|
T Consensus 260 ~~~~i~~spd----g~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~ 334 (361)
T 3scy_A 260 GSGDIHLSPD----GKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFE 334 (361)
T ss_dssp CEEEEEECTT----SSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEE
T ss_pred CcccEEECCC----CCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEE
Confidence 3568999999 7777776644 5899999986 344 3334443 4456788 999999887766 67889996
Q ss_pred -eCCCCceee
Q psy14456 77 -DLRTRGCTN 85 (93)
Q Consensus 77 -d~~~~~~~~ 85 (93)
|..+++...
T Consensus 335 ~d~~~g~~~~ 344 (361)
T 3scy_A 335 RDQATGLLTD 344 (361)
T ss_dssp ECTTTCCEEE
T ss_pred EECCCCcEee
Confidence 555665433
No 158
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.61 E-value=1.2e-07 Score=58.67 Aligned_cols=78 Identities=12% Similarity=0.104 Sum_probs=57.6
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC-----CceeEEeeccccc--------------eEEE-EecCCC
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT-----GQAFQALSGHSGH--------------VLSL-YNWGGA 62 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-----~~~~~~~~~~~~~--------------v~~~-~~~~~~ 62 (93)
.+.+..++|+|+ ++.++.+ .++.|.+|++.+ ++.......+... +..+ |+|+++
T Consensus 120 ~~~~~~~~~Spd----G~~la~~--~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~ 193 (706)
T 2z3z_A 120 NEETASLDFSPV----GDRVAYV--RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGS 193 (706)
T ss_dssp TTCCTTCEECTT----SSEEEEE--ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSS
T ss_pred cccccCCcCCCC----CCEEEEE--ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCC
Confidence 456788999999 7777774 389999999988 7665544333332 3677 999999
Q ss_pred EEEEec---------------------------------CCCcEEEEeCCCCceeeE
Q psy14456 63 TVLSGS---------------------------------HDRTVRFWDLRTRGCTNV 86 (93)
Q Consensus 63 ~~~s~~---------------------------------~~~~i~~~d~~~~~~~~~ 86 (93)
.+++++ .+..+.+||+.++.....
T Consensus 194 ~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~ 250 (706)
T 2z3z_A 194 CLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYL 250 (706)
T ss_dssp EEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEEC
T ss_pred EEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEee
Confidence 998876 446799999988765443
No 159
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.60 E-value=8.8e-07 Score=57.34 Aligned_cols=78 Identities=17% Similarity=0.147 Sum_probs=62.5
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEE-EEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCc
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIY-VTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRG 82 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~-~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~ 82 (93)
.+..++|+ + ++.++.++. +..+. +|+...+.... +.++...+..+ |+|++..+++++.++.+.+||+.+++
T Consensus 339 ~~~~~~~s-d----g~~l~~~s~-~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~ 411 (1045)
T 1k32_A 339 RYVRRGGD-T----KVAFIHGTR-EGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK 411 (1045)
T ss_dssp EEEEECSS-S----EEEEEEEET-TEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred eEEeeeEc-C----CCeEEEEEC-CCceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCc
Confidence 67888888 7 677777663 77888 88988776543 44777788889 99999999999999999999999988
Q ss_pred eeeEecC
Q psy14456 83 CTNVLTP 89 (93)
Q Consensus 83 ~~~~~~~ 89 (93)
....+..
T Consensus 412 ~~~~~~~ 418 (1045)
T 1k32_A 412 PTVIERS 418 (1045)
T ss_dssp EEEEEEC
T ss_pred eEEeccC
Confidence 7666533
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.54 E-value=1.6e-07 Score=58.30 Aligned_cols=70 Identities=19% Similarity=0.188 Sum_probs=55.3
Q ss_pred EEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeecccc---ceEEE-EecCCCEEEEecC---------CCcEE
Q psy14456 8 DVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSG---HVLSL-YNWGGATVLSGSH---------DRTVR 74 (93)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~---~v~~~-~~~~~~~~~s~~~---------~~~i~ 74 (93)
.+.|+|+ +. ++.++ .++.|++||+.+++....+..+.. .+..+ |+|+++.++.++. ++.+.
T Consensus 20 ~~~~s~d----g~-~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~ 93 (719)
T 1z68_A 20 FPNWISG----QE-YLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYY 93 (719)
T ss_dssp CCEESSS----SE-EEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred ccEECCC----Ce-EEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEE
Confidence 6789998 65 44444 499999999999987766655543 37788 9999999987765 68999
Q ss_pred EEeCCCCce
Q psy14456 75 FWDLRTRGC 83 (93)
Q Consensus 75 ~~d~~~~~~ 83 (93)
+||+.+++.
T Consensus 94 ~~d~~~g~~ 102 (719)
T 1z68_A 94 IYDLSNGEF 102 (719)
T ss_dssp EEETTTTEE
T ss_pred EEECCCCcc
Confidence 999998876
No 161
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.53 E-value=3.4e-07 Score=55.71 Aligned_cols=75 Identities=11% Similarity=0.024 Sum_probs=57.4
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCC--eEEEEeCCCCceeEEeeccccce--------EEE-EecCCCEEEEecCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDC--KIYVTDCATGQAFQALSGHSGHV--------LSL-YNWGGATVLSGSHD 70 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~--~v~~~~~~~~~~~~~~~~~~~~v--------~~~-~~~~~~~~~s~~~~ 70 (93)
|.+.+..++|+|+ ++.++++. .++ .|.+||++++... .+.++...+ ... |+|++.++++++.+
T Consensus 193 ~~~~~~~~~~SpD----G~~l~~~~-~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~ 266 (582)
T 3o4h_A 193 GEGSFSSASISPG----MKVTAGLE-TAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARRE 266 (582)
T ss_dssp SSCEEEEEEECTT----SCEEEEEE-CSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEET
T ss_pred CCCccccceECCC----CCEEEEcc-CCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcC
Confidence 4567899999999 78888554 588 8999999988776 555554322 233 79999888999999
Q ss_pred CcEEEEeCCCCcee
Q psy14456 71 RTVRFWDLRTRGCT 84 (93)
Q Consensus 71 ~~i~~~d~~~~~~~ 84 (93)
+.+.+|++ ++..
T Consensus 267 g~~~l~~~--g~~~ 278 (582)
T 3o4h_A 267 GRSAVFID--GERV 278 (582)
T ss_dssp TEEEEEET--TEEE
T ss_pred CcEEEEEE--CCee
Confidence 99999998 5443
No 162
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.48 E-value=1.4e-05 Score=44.69 Aligned_cols=76 Identities=9% Similarity=-0.030 Sum_probs=58.0
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCc
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRG 82 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~ 82 (93)
....+++|+|+ ++.++.++..++.|..|+...+ ...+..+...+..+ +++++.++++...++.|.+||..+++
T Consensus 28 ~~~eg~~~d~~----g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 28 TWTEGPVYVPA----RSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGE 101 (296)
T ss_dssp SSEEEEEEEGG----GTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCC
T ss_pred ccccCCeEeCC----CCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCc
Confidence 34678999998 6634444446899999998877 55565566777888 99999988887777899999998776
Q ss_pred eee
Q psy14456 83 CTN 85 (93)
Q Consensus 83 ~~~ 85 (93)
...
T Consensus 102 ~~~ 104 (296)
T 3e5z_A 102 WES 104 (296)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 163
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.42 E-value=5.1e-07 Score=56.09 Aligned_cols=72 Identities=10% Similarity=0.075 Sum_probs=55.0
Q ss_pred eeEEEEEecCCCCcceEEEeee--------CCCeEEEEeCCCCcee--EEeeccccceEEE-EecCCCEEEEecCCCcEE
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGA--------GDCKIYVTDCATGQAF--QALSGHSGHVLSL-YNWGGATVLSGSHDRTVR 74 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~--------~~~~v~~~~~~~~~~~--~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~ 74 (93)
+..++|+|+ ++.++.+.. .++.+.+||+.+++.+ ..+ ...+..+ |+|+++.++.+. ++.|.
T Consensus 62 ~~~~~~SpD----g~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~ 133 (719)
T 1z68_A 62 ASNYGLSPD----RQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIY 133 (719)
T ss_dssp CSEEEECTT----SSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEE
T ss_pred eeeEEECCC----CCeEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEE
Confidence 789999999 777776542 1589999999988762 222 2456677 999999998875 78999
Q ss_pred EEeCCCCceee
Q psy14456 75 FWDLRTRGCTN 85 (93)
Q Consensus 75 ~~d~~~~~~~~ 85 (93)
+||+.++...+
T Consensus 134 ~~~~~~g~~~~ 144 (719)
T 1z68_A 134 LKQRPGDPPFQ 144 (719)
T ss_dssp EESSTTSCCEE
T ss_pred EEeCCCCCcEE
Confidence 99998876544
No 164
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.40 E-value=5.2e-06 Score=51.13 Aligned_cols=77 Identities=12% Similarity=0.090 Sum_probs=53.6
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCC-------CeEEEEeCC-CC---ceeEEeeccccceEEE-EecCCCEEEEecCCC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGD-------CKIYVTDCA-TG---QAFQALSGHSGHVLSL-YNWGGATVLSGSHDR 71 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~-------~~v~~~~~~-~~---~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~ 71 (93)
..+..++|+|+ ++.++.+.... ..|.+|++. ++ .......++...+..+ |+|++++++++..++
T Consensus 188 ~~~~~~~~SpD----G~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~ 263 (662)
T 3azo_A 188 RFVTGPRLSPD----GRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTG 263 (662)
T ss_dssp SEECCCEECTT----SSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTS
T ss_pred CcccCceECCC----CCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCC
Confidence 45777899999 77776555322 479999998 56 3333334456778888 999999878887777
Q ss_pred --cEEEEeCCCCcee
Q psy14456 72 --TVRFWDLRTRGCT 84 (93)
Q Consensus 72 --~i~~~d~~~~~~~ 84 (93)
.+..||..+++..
T Consensus 264 ~~~l~~~~~~~~~~~ 278 (662)
T 3azo_A 264 WWNLHRVDPATGAAT 278 (662)
T ss_dssp SCEEEEECTTTCCEE
T ss_pred CeEEEEEECCCCcee
Confidence 5666676565543
No 165
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.38 E-value=4.7e-06 Score=52.04 Aligned_cols=74 Identities=12% Similarity=0.170 Sum_probs=53.8
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCC----eEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCc------
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDC----KIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRT------ 72 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~----~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~------ 72 (93)
..+..++|+|+ +++++.+.+++| .|++||+.+++.+...... ..+..+ |+|++..++.++.+..
T Consensus 125 ~~~~~~~~SPD----g~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~ 199 (710)
T 2xdw_A 125 VALRGYAFSED----GEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDG 199 (710)
T ss_dssp EEEEEEEECTT----SSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSS
T ss_pred EEEEEEEECCC----CCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccc
Confidence 35788999999 677765554344 8999999998876532222 224567 9999998887776654
Q ss_pred ----------EEEEeCCCCc
Q psy14456 73 ----------VRFWDLRTRG 82 (93)
Q Consensus 73 ----------i~~~d~~~~~ 82 (93)
|.+|++.+++
T Consensus 200 ~~~~~~~~~~v~~~~l~t~~ 219 (710)
T 2xdw_A 200 TETSTNLHQKLYYHVLGTDQ 219 (710)
T ss_dssp SCCCCCCCCEEEEEETTSCG
T ss_pred cccccCCCCEEEEEECCCCc
Confidence 9999998775
No 166
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.36 E-value=3e-05 Score=43.96 Aligned_cols=76 Identities=9% Similarity=0.035 Sum_probs=56.3
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCC----CcEEEEeC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHD----RTVRFWDL 78 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~----~~i~~~d~ 78 (93)
..+.+++|+|+ +.++++.. .++.|.+|+.++++.......+...+..+ +++++.++++...+ +.+.+||.
T Consensus 45 ~~~~~~~~~~~----g~l~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~ 119 (333)
T 2dg1_A 45 LQLEGLNFDRQ----GQLFLLDV-FEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATE 119 (333)
T ss_dssp CCEEEEEECTT----SCEEEEET-TTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECT
T ss_pred ccccCcEECCC----CCEEEEEC-CCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeC
Confidence 44678899887 56555543 58999999998877654443456678889 99999888877665 68999998
Q ss_pred CCCcee
Q psy14456 79 RTRGCT 84 (93)
Q Consensus 79 ~~~~~~ 84 (93)
.++...
T Consensus 120 ~~~~~~ 125 (333)
T 2dg1_A 120 NGDNLQ 125 (333)
T ss_dssp TSCSCE
T ss_pred CCCEEE
Confidence 876544
No 167
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.36 E-value=1.3e-06 Score=50.36 Aligned_cols=79 Identities=20% Similarity=0.212 Sum_probs=54.4
Q ss_pred eeEEEEEecCCCCcceEEEeeeCC--CeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCc
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGD--CKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRG 82 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~--~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~ 82 (93)
+..++|+|+ ++.++.....+ ..+.+|++.+++......+........ |+|+++.++..+.++.+.+||+.+++
T Consensus 38 ~~~~~~Spd----G~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~ 113 (396)
T 3c5m_A 38 FYQKCFTQD----GKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLE 113 (396)
T ss_dssp TTSCCBCTT----SCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred eecCcCCCC----CCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCC
Confidence 667889998 67766654333 468888988776544333332222225 89999999888888899999998877
Q ss_pred eeeEec
Q psy14456 83 CTNVLT 88 (93)
Q Consensus 83 ~~~~~~ 88 (93)
......
T Consensus 114 ~~~~~~ 119 (396)
T 3c5m_A 114 EQVIYT 119 (396)
T ss_dssp EEEEEE
T ss_pred cEEEEe
Confidence 554443
No 168
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.35 E-value=1.1e-06 Score=55.07 Aligned_cols=75 Identities=16% Similarity=0.170 Sum_probs=56.6
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccc-----eEEE-EecCCCEEEEecCC-------
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGH-----VLSL-YNWGGATVLSGSHD------- 70 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~-----v~~~-~~~~~~~~~s~~~~------- 70 (93)
.....+.|+|+ ++++++ + ++.|.+|++.++++...+.+|... ...+ |+|+++.++.++.+
T Consensus 17 ~~~~~~~w~~d----g~~~~~-~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~ 89 (740)
T 4a5s_A 17 LKLYSLRWISD----HEYLYK-Q--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHS 89 (740)
T ss_dssp CCCCCEEECSS----SEEEEE-E--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSC
T ss_pred ccccccEECCC----CcEEEE-c--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEc
Confidence 34668899998 666655 3 899999999999887777766532 2236 89999998887765
Q ss_pred --CcEEEEeCCCCceee
Q psy14456 71 --RTVRFWDLRTRGCTN 85 (93)
Q Consensus 71 --~~i~~~d~~~~~~~~ 85 (93)
+.+.+||+.+++..+
T Consensus 90 ~~~~~~~~d~~~~~~~~ 106 (740)
T 4a5s_A 90 YTASYDIYDLNKRQLIT 106 (740)
T ss_dssp EEEEEEEEETTTTEECC
T ss_pred cceEEEEEECCCCcEEE
Confidence 566799999887543
No 169
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.35 E-value=1.4e-05 Score=46.12 Aligned_cols=72 Identities=10% Similarity=0.093 Sum_probs=52.7
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCC-CCcee--EEee--ccccceEEE-EecCCCEEEEec-CCCcEEEE
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCA-TGQAF--QALS--GHSGHVLSL-YNWGGATVLSGS-HDRTVRFW 76 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~--~~~~--~~~~~v~~~-~~~~~~~~~s~~-~~~~i~~~ 76 (93)
..+.+++|+|+ ++.++++...+..|.+|+++ +++.. ..+. .+...+..+ |+|+++.++.++ .++.+.+|
T Consensus 145 ~~~~~~~~spd----G~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~ 220 (365)
T 1jof_A 145 TGIHGMVFDPT----ETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEY 220 (365)
T ss_dssp CCEEEEEECTT----SSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CcceEEEECCC----CCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEE
Confidence 46889999999 67777665447899999998 66543 2332 234567788 999998887665 57899999
Q ss_pred eCC
Q psy14456 77 DLR 79 (93)
Q Consensus 77 d~~ 79 (93)
++.
T Consensus 221 ~~~ 223 (365)
T 1jof_A 221 VID 223 (365)
T ss_dssp EEC
T ss_pred EEe
Confidence 765
No 170
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.34 E-value=6.8e-06 Score=47.47 Aligned_cols=73 Identities=8% Similarity=0.009 Sum_probs=50.7
Q ss_pred ceeEEE-EEecCCCCcceEEEeeeCCC-----eEEEEeCC-CCceeE---EeeccccceEEE-Eec---CCCEEEEecC-
Q psy14456 5 TVRDVC-FIEDTSNKSSLLISGGAGDC-----KIYVTDCA-TGQAFQ---ALSGHSGHVLSL-YNW---GGATVLSGSH- 69 (93)
Q Consensus 5 ~v~~~~-~~~~~~~~~~~~~~~g~~~~-----~v~~~~~~-~~~~~~---~~~~~~~~v~~~-~~~---~~~~~~s~~~- 69 (93)
.+..++ |+|+ ++.++++...+. .|.+|+++ +++... ....+......+ |+| ++.++++++.
T Consensus 255 ~~~~i~~~spd----G~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~ 330 (365)
T 1jof_A 255 YRADVCALTFS----GKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQ 330 (365)
T ss_dssp EEEEEEEECTT----SSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSS
T ss_pred ccccEEEECCC----CCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcC
Confidence 477899 9999 677666542233 89999986 555433 122333445567 899 7998888875
Q ss_pred CCcEEEEeCCCC
Q psy14456 70 DRTVRFWDLRTR 81 (93)
Q Consensus 70 ~~~i~~~d~~~~ 81 (93)
++.+.+|++...
T Consensus 331 ~~~v~v~~~~~~ 342 (365)
T 1jof_A 331 EGWLEIYRWKDE 342 (365)
T ss_dssp SCEEEEEEEETT
T ss_pred CCeEEEEEEchh
Confidence 589999988765
No 171
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.33 E-value=1.7e-05 Score=45.16 Aligned_cols=76 Identities=17% Similarity=0.132 Sum_probs=51.5
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCC--Ce--EEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecC----------
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGD--CK--IYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSH---------- 69 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~--~~--v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~---------- 69 (93)
.+..+.|+|+ ++.++.....+ +. |.+|++.+++........ . +..+ |+|++..++..+.
T Consensus 60 ~~~~~~~SpD----g~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~ 133 (347)
T 2gop_A 60 NATMPRISPD----GKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIF 133 (347)
T ss_dssp SCEEEEECTT----SSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC------
T ss_pred cCCCeEECCC----CCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEE
Confidence 4667899999 67766655322 33 777788777655443333 3 7788 9999998876652
Q ss_pred -----------------CCcEEEEeCCCCceeeE
Q psy14456 70 -----------------DRTVRFWDLRTRGCTNV 86 (93)
Q Consensus 70 -----------------~~~i~~~d~~~~~~~~~ 86 (93)
...+.+||+.+++.++.
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~ 167 (347)
T 2gop_A 134 EDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEE 167 (347)
T ss_dssp ---CCCC---------CEEEEEEEETTTTEEEEE
T ss_pred EcccceeecCcccccCccceEEEEECCCCeEEee
Confidence 25688899988776333
No 172
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.30 E-value=5e-06 Score=51.22 Aligned_cols=74 Identities=8% Similarity=-0.017 Sum_probs=54.6
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCC----------CeEEEEeCCC------CceeEEee-ccccceEEE-EecCCCE
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGD----------CKIYVTDCAT------GQAFQALS-GHSGHVLSL-YNWGGAT 63 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~----------~~v~~~~~~~------~~~~~~~~-~~~~~v~~~-~~~~~~~ 63 (93)
|...+..++|+|+ ++.++.+.. + ..|.+|++.+ +.. ..+. .+...+..+ |+|+++.
T Consensus 128 ~~~~~~~~~~spD----g~~l~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~ 201 (662)
T 3azo_A 128 GGLRWADPVLLPE----RGEVWCMAE-EFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQ 201 (662)
T ss_dssp TCEEEEEEEEETT----TTEEEEEEE-EECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSE
T ss_pred CCccccCcEECCC----CCEEEEEEe-cccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCE
Confidence 4567889999999 677776653 4 5899999987 544 4444 455666677 9999999
Q ss_pred EEEecCC--------CcEEEEeCC-CC
Q psy14456 64 VLSGSHD--------RTVRFWDLR-TR 81 (93)
Q Consensus 64 ~~s~~~~--------~~i~~~d~~-~~ 81 (93)
++..+.+ ..|.+||+. ++
T Consensus 202 la~~~~~~~~~~~~~~~i~~~d~~~~g 228 (662)
T 3azo_A 202 AVWLAWDHPRMPWEGTELKTARVTEDG 228 (662)
T ss_dssp EEEEEECTTCCTTTCEEEEEEEECTTS
T ss_pred EEEEECCCCCCCCCCcEEEEEEECCCC
Confidence 8866643 479999998 56
No 173
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.26 E-value=1.5e-05 Score=47.00 Aligned_cols=73 Identities=14% Similarity=0.067 Sum_probs=52.1
Q ss_pred CccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC
Q psy14456 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 2 h~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~ 80 (93)
|+.++.++.+.+. + ++++. .||.+.+|++..+.... +...+.++ |+|+| ++.+..|+.+.+|+...
T Consensus 125 ~~~~v~~i~~~~p-----~-~av~~-~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~ 191 (388)
T 1xip_A 125 FEKPVFQLKNVNN-----T-LVILN-SVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRN 191 (388)
T ss_dssp CSSCEEEEEECSS-----E-EEEEE-TTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCEEEEEEET
T ss_pred eecceeeEEecCC-----C-EEEEE-CCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCC
Confidence 3445666665543 2 55554 59999999998777543 34578899 99988 66788899999998877
Q ss_pred Cce--eeEe
Q psy14456 81 RGC--TNVL 87 (93)
Q Consensus 81 ~~~--~~~~ 87 (93)
+.. .+.+
T Consensus 192 ~~~~~k~~I 200 (388)
T 1xip_A 192 GEMEKQFEF 200 (388)
T ss_dssp TEEEEEEEE
T ss_pred cccccccee
Confidence 664 4445
No 174
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.23 E-value=5.8e-06 Score=51.88 Aligned_cols=72 Identities=7% Similarity=-0.056 Sum_probs=55.0
Q ss_pred eEEEEEecCCCCcceEEEeeeCC---------CeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEE
Q psy14456 7 RDVCFIEDTSNKSSLLISGGAGD---------CKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFW 76 (93)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~g~~~---------~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~ 76 (93)
....|+|+ ++.++.+.. + +.+.+||+.+++.. .+..+.+.+... |+|+++.++.+ .++.|.+|
T Consensus 65 ~~~~~Spd----g~~l~~~~~-~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~ 137 (740)
T 4a5s_A 65 NDYSISPD----GQFILLEYN-YVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVK 137 (740)
T ss_dssp CEEEECTT----SSEEEEEEE-EEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEE
T ss_pred cceEECCC----CCEEEEEEC-CeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEE-ECCeEEEE
Confidence 34788999 677766552 3 56779999988754 356667778888 99999998877 47899999
Q ss_pred eCCCCceee
Q psy14456 77 DLRTRGCTN 85 (93)
Q Consensus 77 d~~~~~~~~ 85 (93)
+..++...+
T Consensus 138 ~~~~~~~~~ 146 (740)
T 4a5s_A 138 IEPNLPSYR 146 (740)
T ss_dssp SSTTSCCEE
T ss_pred ECCCCceEE
Confidence 998876543
No 175
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.23 E-value=7e-06 Score=47.63 Aligned_cols=75 Identities=9% Similarity=-0.052 Sum_probs=56.4
Q ss_pred EEEEEecCCCCcceEEEeee---------CCCeEEEEeCCCCceeEEeecc------ccceEEE-EecCCCEEEEecC--
Q psy14456 8 DVCFIEDTSNKSSLLISGGA---------GDCKIYVTDCATGQAFQALSGH------SGHVLSL-YNWGGATVLSGSH-- 69 (93)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~g~---------~~~~v~~~~~~~~~~~~~~~~~------~~~v~~~-~~~~~~~~~s~~~-- 69 (93)
.++|+|+ ++.++++.. .++.|.+||..+.+.+..+... ......+ ++|+++++++++.
T Consensus 54 ~i~~spd----g~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~ 129 (361)
T 2oiz_A 54 HVQVSND----GKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASP 129 (361)
T ss_dssp EEEECTT----SSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESS
T ss_pred ceEECCC----CCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCC
Confidence 7899999 677766541 2577999999988887766422 2234566 8999999887763
Q ss_pred CCcEEEEeCCCCceeeE
Q psy14456 70 DRTVRFWDLRTRGCTNV 86 (93)
Q Consensus 70 ~~~i~~~d~~~~~~~~~ 86 (93)
++.+.+||+.+++.+..
T Consensus 130 ~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 130 ATSIGIVDVAKGDYVED 146 (361)
T ss_dssp SEEEEEEETTTTEEEEE
T ss_pred CCeEEEEECCCCcEEEE
Confidence 68999999999887766
No 176
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.20 E-value=6.1e-05 Score=44.51 Aligned_cols=69 Identities=20% Similarity=0.264 Sum_probs=52.3
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCcee
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCT 84 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~ 84 (93)
|+.++| + +..++.+ .++.|++||+...........+...+..+ +.+. .++.+..|+.+.+||+..+...
T Consensus 90 V~~l~f--d----~~~L~v~--~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~ 159 (388)
T 1xip_A 90 VIFVCF--H----GDQVLVS--TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTK 159 (388)
T ss_dssp EEEEEE--E----TTEEEEE--ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEE
T ss_pred eeEEEE--C----CCEEEEE--cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccc
Confidence 899999 5 5666665 48999999998776555566666777776 5432 3888899999999999876543
No 177
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.18 E-value=9.8e-05 Score=45.55 Aligned_cols=78 Identities=15% Similarity=0.127 Sum_probs=60.1
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCC--CCceeEEeeccccceEEE-Ee----cCCCEEEEec-CCCcEEEE
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCA--TGQAFQALSGHSGHVLSL-YN----WGGATVLSGS-HDRTVRFW 76 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~--~~~~~~~~~~~~~~v~~~-~~----~~~~~~~s~~-~~~~i~~~ 76 (93)
.+..+.|+|+ ++++++++ +++.|.+||+. +++.+..+..... ...+ |+ |++++++.++ .++.+.++
T Consensus 198 ~p~~v~~SpD----Gr~lyv~~-~dg~V~viD~~~~t~~~v~~i~~G~~-P~~ia~s~~~~pDGk~l~v~n~~~~~v~Vi 271 (567)
T 1qks_A 198 AVHISRLSAS----GRYLFVIG-RDGKVNMIDLWMKEPTTVAEIKIGSE-ARSIETSKMEGWEDKYAIAGAYWPPQYVIM 271 (567)
T ss_dssp CEEEEEECTT----SCEEEEEE-TTSEEEEEETTSSSCCEEEEEECCSE-EEEEEECCSTTCTTTEEEEEEEETTEEEEE
T ss_pred CccceEECCC----CCEEEEEc-CCCeEEEEECCCCCCcEeEEEecCCC-CceeEEccccCCCCCEEEEEEccCCeEEEE
Confidence 4568899999 77777766 69999999996 7777777764333 4577 88 6998877665 66999999
Q ss_pred eCCCCceeeEec
Q psy14456 77 DLRTRGCTNVLT 88 (93)
Q Consensus 77 d~~~~~~~~~~~ 88 (93)
|..+.+.++.+.
T Consensus 272 D~~t~~~~~~i~ 283 (567)
T 1qks_A 272 DGETLEPKKIQS 283 (567)
T ss_dssp ETTTCCEEEEEE
T ss_pred ECCCCcEEEEEe
Confidence 999888777664
No 178
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.17 E-value=0.00011 Score=41.90 Aligned_cols=80 Identities=13% Similarity=0.150 Sum_probs=57.5
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeec----------cccceEEE-EecC-CCEEEEecCCCc
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSG----------HSGHVLSL-YNWG-GATVLSGSHDRT 72 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~----------~~~~v~~~-~~~~-~~~~~s~~~~~~ 72 (93)
....++++|+. +..+++.+..++.|.+|+ ..+..+..+.. +-.....+ ++++ +.++++...++.
T Consensus 144 ~P~~ia~~~~~---g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~ 219 (329)
T 3fvz_A 144 QPTDVAVEPST---GAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGR 219 (329)
T ss_dssp SEEEEEECTTT---CCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTE
T ss_pred CCcEEEEeCCC---CeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCE
Confidence 56789999831 566666531489999999 55666655532 22336788 9997 778888888999
Q ss_pred EEEEeCCCCceeeEec
Q psy14456 73 VRFWDLRTRGCTNVLT 88 (93)
Q Consensus 73 i~~~d~~~~~~~~~~~ 88 (93)
|.+||..+++.+..+.
T Consensus 220 I~~~~~~~G~~~~~~~ 235 (329)
T 3fvz_A 220 IQCFKTDTKEFVREIK 235 (329)
T ss_dssp EEEEETTTCCEEEEEC
T ss_pred EEEEECCCCcEEEEEe
Confidence 9999999888777663
No 179
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.16 E-value=6.2e-05 Score=41.84 Aligned_cols=71 Identities=17% Similarity=0.215 Sum_probs=50.9
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCC-eEEEEeCCCCceeEEeeccc--cceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDC-KIYVTDCATGQAFQALSGHS--GHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~-~v~~~~~~~~~~~~~~~~~~--~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
.....++++++ +..+++.. .++ .|.+|+. .+..+..+..+. ..+..+ +.+++.++++ +.++.|.+|++.
T Consensus 207 ~~p~~i~~d~~----G~l~v~~~-~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~ 279 (286)
T 1q7f_A 207 NYPIGVGINSN----GEILIADN-HNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYV 279 (286)
T ss_dssp CSEEEEEECTT----CCEEEEEC-SSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECS
T ss_pred CCCcEEEECCC----CCEEEEeC-CCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcc
Confidence 35678899887 66666654 365 9999995 455565554433 235678 9999987777 568999999986
Q ss_pred CC
Q psy14456 80 TR 81 (93)
Q Consensus 80 ~~ 81 (93)
..
T Consensus 280 ~~ 281 (286)
T 1q7f_A 280 QL 281 (286)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 180
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.14 E-value=0.00012 Score=41.84 Aligned_cols=79 Identities=20% Similarity=0.138 Sum_probs=58.7
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCC------------------------CeEEEEeCCCCceeEEee-ccccceEEE-E
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGD------------------------CKIYVTDCATGQAFQALS-GHSGHVLSL-Y 57 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~------------------------~~v~~~~~~~~~~~~~~~-~~~~~v~~~-~ 57 (93)
+.+.+++++|+ ++.+++.. .+ +.|.+||..+++.+..+. ++-.....+ +
T Consensus 24 ~~v~~va~d~~----G~l~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~ 98 (329)
T 3fvz_A 24 GQVSGVALDSK----NNLVIFHR-GDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSI 98 (329)
T ss_dssp SCEEEEEECTT----CCEEEEEC-TTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEE
T ss_pred CCceEEEECCC----CCEEEEeC-CCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEE
Confidence 56899999998 67666544 34 379999998888776554 344566788 9
Q ss_pred ecCCCEEEEecCCCcEEEEeCCCCc-eeeEe
Q psy14456 58 NWGGATVLSGSHDRTVRFWDLRTRG-CTNVL 87 (93)
Q Consensus 58 ~~~~~~~~s~~~~~~i~~~d~~~~~-~~~~~ 87 (93)
++++.++++...++.|.+||..... .+..+
T Consensus 99 d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~ 129 (329)
T 3fvz_A 99 DTDGNYWVTDVALHQVFKLDPHSKEGPLLIL 129 (329)
T ss_dssp CTTSCEEEEETTTTEEEEECTTCSSCCSEEE
T ss_pred CCCCCEEEEECCCCEEEEEeCCCCeEEEEEe
Confidence 9999988888889999999976442 34444
No 181
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.11 E-value=1.7e-05 Score=49.48 Aligned_cols=74 Identities=12% Similarity=0.086 Sum_probs=52.6
Q ss_pred ccceeEEEEEecCCCCcceEEEe----eeCCCeEEEEeCCCCcee-EE-eeccccceEEE-EecCCCEEEEecCCCc---
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISG----GAGDCKIYVTDCATGQAF-QA-LSGHSGHVLSL-YNWGGATVLSGSHDRT--- 72 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~~~~-~~-~~~~~~~v~~~-~~~~~~~~~s~~~~~~--- 72 (93)
+..+..++|+|+ +++++-+ |+++..|++||+.+++.+ .. +... ....+ |+|+++.++..+.+..
T Consensus 120 ~~~~~~~~~SPD----G~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~--~~~~~~wspDg~~l~~~~~d~~~~~ 193 (695)
T 2bkl_A 120 TVSLGTWAVSWD----GKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGG--KYATPKWTPDSKGFYYEWLPTDPSI 193 (695)
T ss_dssp CEEEEEEEECTT----SSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCC--TTCCCEECTTSSEEEEEECCCCTTS
T ss_pred CEEEEEEEECCC----CCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcc--cccceEEecCCCEEEEEEecCCCCC
Confidence 346889999999 6766633 333468999999998765 21 1111 11456 9999999988877665
Q ss_pred ----------EEEEeCCCCc
Q psy14456 73 ----------VRFWDLRTRG 82 (93)
Q Consensus 73 ----------i~~~d~~~~~ 82 (93)
|.+|++.++.
T Consensus 194 ~~~~~~~~~~v~~~~l~t~~ 213 (695)
T 2bkl_A 194 KVDERPGYTTIRYHTLGTEP 213 (695)
T ss_dssp CGGGGGGGCEEEEEETTSCG
T ss_pred ccccCCCCCEEEEEECCCCc
Confidence 9999998876
No 182
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.06 E-value=0.00026 Score=39.30 Aligned_cols=78 Identities=14% Similarity=0.261 Sum_probs=55.0
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeecc--ccceEEE-EecCCCEEEEecCCC-cEEEEeCC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGH--SGHVLSL-YNWGGATVLSGSHDR-TVRFWDLR 79 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~--~~~v~~~-~~~~~~~~~s~~~~~-~i~~~d~~ 79 (93)
..+..++++++ +..+++.. .++.|.+|+.. +..+..+... ...+..+ +++++.++++...++ .|.+||.
T Consensus 164 ~~p~~i~~~~~----g~l~v~~~-~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~- 236 (286)
T 1q7f_A 164 EFPNGVVVNDK----QEIFISDN-RAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ- 236 (286)
T ss_dssp SSEEEEEECSS----SEEEEEEG-GGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-
T ss_pred CCcEEEEECCC----CCEEEEEC-CCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-
Confidence 35778899887 56655544 58999999974 4555555432 3566788 999999888887775 9999995
Q ss_pred CCceeeEec
Q psy14456 80 TRGCTNVLT 88 (93)
Q Consensus 80 ~~~~~~~~~ 88 (93)
++..+..+.
T Consensus 237 ~g~~~~~~~ 245 (286)
T 1q7f_A 237 DGQLISALE 245 (286)
T ss_dssp TSCEEEEEE
T ss_pred CCCEEEEEc
Confidence 455555543
No 183
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.98 E-value=0.00016 Score=40.59 Aligned_cols=67 Identities=15% Similarity=0.093 Sum_probs=51.4
Q ss_pred cceEEEeeeCCCeEEEEeCCCCceeEEeeccc-cceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEecC
Q psy14456 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGHS-GHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLTP 89 (93)
Q Consensus 19 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~-~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~ 89 (93)
++.+++. +.++.|.+||.++++.+..+..+. ..+..+ +.++++++++ .+..+..||. +++.+..+..
T Consensus 5 ~~~lv~~-~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G~~~W~~~~ 73 (276)
T 3no2_A 5 QHLLVGG-SGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITR-DGRELWNIAA 73 (276)
T ss_dssp CEEEEEC-TTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT-TSCEEEEEEC
T ss_pred CcEEEee-CCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC-CCCEEEEEcC
Confidence 3555554 469999999999999998887655 456777 8999998883 4678999998 7777666653
No 184
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.97 E-value=0.00023 Score=43.96 Aligned_cols=68 Identities=16% Similarity=0.055 Sum_probs=52.3
Q ss_pred ceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC--CCceeeEec
Q psy14456 20 SLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR--TRGCTNVLT 88 (93)
Q Consensus 20 ~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~--~~~~~~~~~ 88 (93)
+.++.+...++.|.++|..+++.+..+.... .+..+ |+++++++++++.++.+.+||+. +++.+..+.
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~-~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~ 237 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIK 237 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEE
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEEEEeCCC-CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEe
Confidence 3444445569999999999999888776332 34577 99999999988899999999996 666665554
No 185
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.95 E-value=0.00037 Score=40.78 Aligned_cols=58 Identities=12% Similarity=0.083 Sum_probs=46.5
Q ss_pred CCeEEEEeCCCCceeEEeeccccceEEE-EecCCC-EEEEec-CCCcEEEEeCCCCceeeEe
Q psy14456 29 DCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGA-TVLSGS-HDRTVRFWDLRTRGCTNVL 87 (93)
Q Consensus 29 ~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~-~~~s~~-~~~~i~~~d~~~~~~~~~~ 87 (93)
.+.|.+.|..+++.+..+.. ......+ |+++++ .++++. .++.+.++|..+++.+..+
T Consensus 297 ~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 297 AKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred CCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 35799999999998887753 2345678 999998 777776 5899999999999888773
No 186
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.91 E-value=0.0006 Score=38.37 Aligned_cols=79 Identities=13% Similarity=0.006 Sum_probs=56.0
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeC--CCCce-----eEEeeccccceEEE-EecCCCEEEEecCCCcEEEEe
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDC--ATGQA-----FQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~~-----~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d 77 (93)
...++|+|+ ++.++.+...++.|..|++ .++.. ...+.........+ +.+++++.++...++.|..||
T Consensus 151 pngi~~spd----g~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d 226 (297)
T 3g4e_A 151 SNGLDWSLD----HKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLD 226 (297)
T ss_dssp EEEEEECTT----SCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEEC
T ss_pred ccceEEcCC----CCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEc
Confidence 467889988 6656555556889999986 44432 12222333456677 889999888887788899999
Q ss_pred CCCCceeeEec
Q psy14456 78 LRTRGCTNVLT 88 (93)
Q Consensus 78 ~~~~~~~~~~~ 88 (93)
..+++.+..+.
T Consensus 227 ~~tG~~~~~i~ 237 (297)
T 3g4e_A 227 PVTGKRLQTVK 237 (297)
T ss_dssp TTTCCEEEEEE
T ss_pred CCCceEEEEEE
Confidence 98888776664
No 187
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.91 E-value=0.00038 Score=40.08 Aligned_cols=76 Identities=14% Similarity=-0.068 Sum_probs=53.2
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE---EecCCCEEEEe---------------
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL---YNWGGATVLSG--------------- 67 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~---~~~~~~~~~s~--------------- 67 (93)
+....|+|+ ++.++.+. .+..+.+||+.+++.......+...+... +++++..++..
T Consensus 83 ~~~~~~spd----g~~l~~~~-~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~ 157 (388)
T 3pe7_A 83 TFGGFLSPD----DDALFYVK-DGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKK 157 (388)
T ss_dssp SSSCEECTT----SSEEEEEE-TTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHH
T ss_pred ccceEEcCC----CCEEEEEe-CCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccch
Confidence 346789999 77777766 48899999999988766555555444333 47788877632
Q ss_pred -------cCCCcEEEEeCCCCceeeE
Q psy14456 68 -------SHDRTVRFWDLRTRGCTNV 86 (93)
Q Consensus 68 -------~~~~~i~~~d~~~~~~~~~ 86 (93)
..+..+.+||+.+++....
T Consensus 158 ~~~~~~~~~~~~l~~~d~~~g~~~~l 183 (388)
T 3pe7_A 158 FHEFYFTKPCCRLMRVDLKTGESTVI 183 (388)
T ss_dssp HHHHGGGCCCEEEEEEETTTCCEEEE
T ss_pred hhhhhccCCcceEEEEECCCCceEEe
Confidence 2446789999998865443
No 188
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.90 E-value=0.00031 Score=41.22 Aligned_cols=78 Identities=10% Similarity=0.058 Sum_probs=56.1
Q ss_pred EEEEecCCCCcceEEEeee---C-----CCeEEEEeCCCCceeEEeeccccceEEE-EecCCC-EEEEec-CCCcEEEEe
Q psy14456 9 VCFIEDTSNKSSLLISGGA---G-----DCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGA-TVLSGS-HDRTVRFWD 77 (93)
Q Consensus 9 ~~~~~~~~~~~~~~~~~g~---~-----~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~-~~~s~~-~~~~i~~~d 77 (93)
+.++|+ ++.++.+.. . +..+.++|..+.+.+..+.... ....+ |++++. ++++.. .++.+.++|
T Consensus 269 v~~s~d----g~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID 343 (368)
T 1mda_H 269 VAKLKN----TDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYD 343 (368)
T ss_dssp EEEETT----TTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred eEEcCC----CCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEE
Confidence 578888 455544321 1 1345599999999888775333 45677 999886 566776 699999999
Q ss_pred CCCCceeeEecCcc
Q psy14456 78 LRTRGCTNVLTPIT 91 (93)
Q Consensus 78 ~~~~~~~~~~~~~~ 91 (93)
..+++.+..+....
T Consensus 344 ~~t~kvv~~I~vg~ 357 (368)
T 1mda_H 344 AASDQDQSSVELDK 357 (368)
T ss_dssp SSSCEEEEECCCCS
T ss_pred CCCCcEEEEEECCC
Confidence 99999988886543
No 189
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.89 E-value=0.00047 Score=38.54 Aligned_cols=76 Identities=16% Similarity=0.127 Sum_probs=52.1
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCC-CCce---eEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCA-TGQA---FQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~---~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
....++|+|+ ++.+ .+...++.|.+|++. .+.. ...+..+...+..+ +++++.++++. ++.|.+||..
T Consensus 173 ~~~gi~~s~d----g~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 173 KPNGLAFLPS----GNLL-VSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD 245 (296)
T ss_dssp SEEEEEECTT----SCEE-EEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT
T ss_pred CCccEEECCC----CCEE-EEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC
Confidence 4578899998 6766 444458899999986 4443 22332233445567 89999877766 7889999986
Q ss_pred CCceeeEec
Q psy14456 80 TRGCTNVLT 88 (93)
Q Consensus 80 ~~~~~~~~~ 88 (93)
++.+..+.
T Consensus 246 -g~~~~~~~ 253 (296)
T 3e5z_A 246 -GDELGRVL 253 (296)
T ss_dssp -SCEEEEEE
T ss_pred -CCEEEEEE
Confidence 65555554
No 190
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.88 E-value=0.00012 Score=43.34 Aligned_cols=77 Identities=16% Similarity=0.063 Sum_probs=56.1
Q ss_pred EEEEEecCCCCcceEEEee---------eCCCeEEEEeCCCCceeEEeeccc-------cceEEE-EecCCCEEEEecC-
Q psy14456 8 DVCFIEDTSNKSSLLISGG---------AGDCKIYVTDCATGQAFQALSGHS-------GHVLSL-YNWGGATVLSGSH- 69 (93)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~g---------~~~~~v~~~~~~~~~~~~~~~~~~-------~~v~~~-~~~~~~~~~s~~~- 69 (93)
.+.++|+ ++.++.+. .+++.|.+||..+.+.+..+.-.. .....+ |+++++.+...+.
T Consensus 82 ~va~spD----G~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~ 157 (386)
T 3sjl_D 82 NPVVADD----GSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS 157 (386)
T ss_dssp EEEECTT----SSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS
T ss_pred cEEECCC----CCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC
Confidence 4889999 56555443 136789999999998887764211 123456 8999998877653
Q ss_pred -CCcEEEEeCCCCceeeEec
Q psy14456 70 -DRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 70 -~~~i~~~d~~~~~~~~~~~ 88 (93)
++.+.++|..+++.+..+.
T Consensus 158 ~~~~VsVID~~t~~vv~tI~ 177 (386)
T 3sjl_D 158 PAPAVGVVDLEGKAFKRMLD 177 (386)
T ss_dssp SSCEEEEEETTTTEEEEEEE
T ss_pred CCCeEEEEECCCCcEEEEEE
Confidence 6899999999998877764
No 191
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.84 E-value=0.00034 Score=39.26 Aligned_cols=67 Identities=10% Similarity=0.102 Sum_probs=53.2
Q ss_pred cceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEec
Q psy14456 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 19 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~ 88 (93)
++.+++.. .++.|..||.+ ++.+..+... ...... ..+++..++++..++.+..+|..+|+.+..+.
T Consensus 136 G~~lv~~~-~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 136 GNYLVPLF-ATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp SCEEEEET-TTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEE
T ss_pred CCEEEEec-CCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEec
Confidence 66777655 59999999988 8888777643 334456 77889999988888899999999998887775
No 192
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.83 E-value=0.0008 Score=37.66 Aligned_cols=73 Identities=18% Similarity=0.199 Sum_probs=53.3
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCC-EEEEecCCCcEEEEeCCCC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGA-TVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~-~~~s~~~~~~i~~~d~~~~ 81 (93)
.....++++++ +..+++.. .++.|..|+.++++.+..+..+...+.++ +++++. ++++...++.+..|++...
T Consensus 226 ~~p~~i~~d~~----G~l~v~~~-~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 226 GGADGMDFDED----NNLLVANW-GSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp CEEEEEEEBTT----CCEEEEEE-TTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CCCCceEECCC----CCEEEEEc-CCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 34567777776 66666654 47899999988777666665555677888 989888 5566667788999998753
No 193
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.81 E-value=8.3e-05 Score=43.33 Aligned_cols=66 Identities=17% Similarity=0.127 Sum_probs=42.4
Q ss_pred cceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEe
Q psy14456 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVL 87 (93)
Q Consensus 19 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~ 87 (93)
+..+++++ .++.+..||..+++.+..+.. +.+.+. +..++..+++++.|+.+..||.++|+.+..+
T Consensus 9 ~~~v~~gs-~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~ 75 (369)
T 2hz6_A 9 ETLLFVST-LDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKL 75 (369)
T ss_dssp TTEEEEEE-TTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEEC
T ss_pred CCEEEEEc-CCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeee
Confidence 45566655 599999999999998877765 444444 5556777788889999999999888765544
No 194
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.78 E-value=0.0012 Score=37.70 Aligned_cols=76 Identities=11% Similarity=0.064 Sum_probs=54.4
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCcee
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCT 84 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~ 84 (93)
...+.+.. +..+++.. .++.|.++|..+++.+..+.. ......+ +++++.++++...++.+.+||..+++..
T Consensus 46 ~~~i~~~~-----~~lyv~~~-~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~ 118 (328)
T 3dsm_A 46 AQSMVIRD-----GIGWIVVN-NSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEIT 118 (328)
T ss_dssp EEEEEEET-----TEEEEEEG-GGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEE
T ss_pred ceEEEEEC-----CEEEEEEc-CCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEE
Confidence 34555532 34445544 589999999999998887753 3455677 8788865555557899999999998877
Q ss_pred eEec
Q psy14456 85 NVLT 88 (93)
Q Consensus 85 ~~~~ 88 (93)
..+.
T Consensus 119 ~~i~ 122 (328)
T 3dsm_A 119 GYIE 122 (328)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
No 195
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.75 E-value=0.00045 Score=43.33 Aligned_cols=70 Identities=13% Similarity=0.117 Sum_probs=48.3
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCe----------------EEEEeCCCCce--eEEee--ccccceEEE-EecCCCEE
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCK----------------IYVTDCATGQA--FQALS--GHSGHVLSL-YNWGGATV 64 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~----------------v~~~~~~~~~~--~~~~~--~~~~~v~~~-~~~~~~~~ 64 (93)
+..++|+|+ ++.++.+.. +.. |.+|++.++.. ...+. .+......+ |++++..+
T Consensus 173 ~~~~~wspD----g~~l~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l 247 (710)
T 2xdw_A 173 FSCMAWTHD----GKGMFYNAY-PQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYV 247 (710)
T ss_dssp SCCEEECTT----SSEEEEEEC-CCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEE
T ss_pred cceEEEEeC----CCEEEEEEE-CCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEE
Confidence 567899999 666666553 443 99999987753 22222 234456677 99999988
Q ss_pred EEecC-----CCcEEEEeCCC
Q psy14456 65 LSGSH-----DRTVRFWDLRT 80 (93)
Q Consensus 65 ~s~~~-----~~~i~~~d~~~ 80 (93)
+..+. +..+.+||+.+
T Consensus 248 ~~~~~~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 248 LLSIREGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp EEEEECSSSSCCEEEEEEGGG
T ss_pred EEEEEccCCCccEEEEEECcc
Confidence 76543 57899999876
No 196
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.74 E-value=0.0013 Score=36.82 Aligned_cols=78 Identities=8% Similarity=0.115 Sum_probs=52.9
Q ss_pred eeEEEEE----ecCCCCcceEEEeeeCCCeEEEEeCC-CCc-----eeEEeeccc-cceEEE-EecCCCEEEEecCCCcE
Q psy14456 6 VRDVCFI----EDTSNKSSLLISGGAGDCKIYVTDCA-TGQ-----AFQALSGHS-GHVLSL-YNWGGATVLSGSHDRTV 73 (93)
Q Consensus 6 v~~~~~~----~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~-----~~~~~~~~~-~~v~~~-~~~~~~~~~s~~~~~~i 73 (93)
...++|+ |+ ++.++.+...++.|.+|+.+ .+. ....+..+. .....+ +++++.++++...++.|
T Consensus 174 ~~~i~~~~~~d~d----g~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i 249 (314)
T 1pjx_A 174 PNGIAVRHMNDGR----PYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHI 249 (314)
T ss_dssp EEEEEEEECTTSC----EEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEE
T ss_pred cceEEEecccCCC----CCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEE
Confidence 4677888 87 55555544457899999876 343 222333333 456678 89999988887778899
Q ss_pred EEEeCCCCceeeEe
Q psy14456 74 RFWDLRTRGCTNVL 87 (93)
Q Consensus 74 ~~~d~~~~~~~~~~ 87 (93)
.+||..+++....+
T Consensus 250 ~~~d~~~g~~~~~~ 263 (314)
T 1pjx_A 250 EVFGPDGGQPKMRI 263 (314)
T ss_dssp EEECTTCBSCSEEE
T ss_pred EEEcCCCCcEeEEE
Confidence 99998866655444
No 197
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.73 E-value=0.00025 Score=44.69 Aligned_cols=72 Identities=15% Similarity=0.095 Sum_probs=49.3
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCC----eEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCC--------
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDC----KIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDR-------- 71 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~----~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~-------- 71 (93)
.+..++|+|+ +++++.+.+++| .|++||+.+++.+.... ....+..+ |+|+ ..++....+.
T Consensus 164 ~~~~~~~SPD----G~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~ 237 (741)
T 1yr2_A 164 ALDAWAASDD----GRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQ 237 (741)
T ss_dssp EEEEEEECTT----SSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEEESCCCEESTT-SEEEEEECCCC-------
T ss_pred EEEeEEECCC----CCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCceeccEEEECC-CEEEEEEecCcccccccc
Confidence 5778999999 677766554334 59999999988754321 11222356 9999 8887666544
Q ss_pred ------cEEEEeCCCCc
Q psy14456 72 ------TVRFWDLRTRG 82 (93)
Q Consensus 72 ------~i~~~d~~~~~ 82 (93)
.|.+|++.++.
T Consensus 238 ~~~~~~~v~~~~lgt~~ 254 (741)
T 1yr2_A 238 ALNYNQTVWLHRLGTPQ 254 (741)
T ss_dssp -CCCCCEEEEEETTSCG
T ss_pred cCCCCCEEEEEECCCCc
Confidence 38889987765
No 198
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.72 E-value=0.0011 Score=38.79 Aligned_cols=74 Identities=9% Similarity=-0.111 Sum_probs=53.5
Q ss_pred EEEEEecCCCCcceEEEeee---------CCCeEEEEeCCCCceeEEeecc-------ccceEEE-EecCCCEEEEecC-
Q psy14456 8 DVCFIEDTSNKSSLLISGGA---------GDCKIYVTDCATGQAFQALSGH-------SGHVLSL-YNWGGATVLSGSH- 69 (93)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~g~---------~~~~v~~~~~~~~~~~~~~~~~-------~~~v~~~-~~~~~~~~~s~~~- 69 (93)
.+.++|+ ++.++.+.. .++.+.++|..+.+.+..+.-- ......+ ++|+++.++.++.
T Consensus 70 ~i~~spD----g~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~ 145 (373)
T 2mad_H 70 NPVAAHS----GSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA 145 (373)
T ss_pred CeEECCC----CCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecC
Confidence 7889999 676666542 3678999999888777655321 1223466 8999998887763
Q ss_pred -CCcEEEEeCCCCceeeE
Q psy14456 70 -DRTVRFWDLRTRGCTNV 86 (93)
Q Consensus 70 -~~~i~~~d~~~~~~~~~ 86 (93)
+..|.++| .+++....
T Consensus 146 ~~~~v~viD-~t~~~~~~ 162 (373)
T 2mad_H 146 AGPAVGLVV-QGGSSDDQ 162 (373)
T ss_pred CCCeEEEEE-CCCCEEeE
Confidence 57899999 98887666
No 199
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.72 E-value=0.00049 Score=37.76 Aligned_cols=75 Identities=4% Similarity=-0.068 Sum_probs=53.4
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCc
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRG 82 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~ 82 (93)
..+..+++.++ +..+++.. .++.|.+|+............+...+..+ +.+++.++++...++.|.++++...+
T Consensus 192 ~~p~~i~~d~~----g~l~v~~~-~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 192 TAPWGIAVDEA----GTVYVTEH-NTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp CSEEEEEECTT----CCEEEEET-TTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred CCceEEEECCC----CCEEEEEC-CCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 34678888887 65555544 48899999987654433222333556788 99999988888899999999987654
Q ss_pred e
Q psy14456 83 C 83 (93)
Q Consensus 83 ~ 83 (93)
.
T Consensus 267 ~ 267 (270)
T 1rwi_B 267 H 267 (270)
T ss_dssp S
T ss_pred c
Confidence 3
No 200
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.72 E-value=0.0013 Score=39.43 Aligned_cols=74 Identities=12% Similarity=0.093 Sum_probs=55.6
Q ss_pred EEEEecCCCCcceEEEee-e--------CCCeEEEEeCCCCceeEEeeccccceEEE-EecCCC-EEEEec-CCCcEEEE
Q psy14456 9 VCFIEDTSNKSSLLISGG-A--------GDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGA-TVLSGS-HDRTVRFW 76 (93)
Q Consensus 9 ~~~~~~~~~~~~~~~~~g-~--------~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~-~~~s~~-~~~~i~~~ 76 (93)
++++|+ ++.++... . .++.|.+.|..+.+.+..+..-. ....+ |+++++ .+++.. .++.+.++
T Consensus 324 va~s~d----g~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-~P~gia~spDg~~~lyv~n~~s~~VsVI 398 (426)
T 3c75_H 324 TAYHRQ----SDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-EIDSINVSQDAEPLLYALSAGTQTLHIY 398 (426)
T ss_dssp EEEEGG----GTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEECCSSSCEEEEEETTTTEEEEE
T ss_pred eEEcCC----CCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-CcCeEEEccCCCEEEEEEcCCCCeEEEE
Confidence 577887 45444432 1 13579999999999988875322 35677 999988 777777 68999999
Q ss_pred eCCCCceeeEe
Q psy14456 77 DLRTRGCTNVL 87 (93)
Q Consensus 77 d~~~~~~~~~~ 87 (93)
|..+++.++.+
T Consensus 399 D~~t~kvv~tI 409 (426)
T 3c75_H 399 DAATGEELRSV 409 (426)
T ss_dssp ETTTCCEEEEE
T ss_pred ECCCCCEEEEe
Confidence 99999998886
No 201
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.71 E-value=0.0003 Score=40.46 Aligned_cols=76 Identities=11% Similarity=0.030 Sum_probs=47.7
Q ss_pred cceeEEEEEe-cCCCCcceEEEeeeC-C----CeEEEEeCCCCceeEEeecc--ccceEEE-EecCCCEEEEecCC----
Q psy14456 4 GTVRDVCFIE-DTSNKSSLLISGGAG-D----CKIYVTDCATGQAFQALSGH--SGHVLSL-YNWGGATVLSGSHD---- 70 (93)
Q Consensus 4 ~~v~~~~~~~-~~~~~~~~~~~~g~~-~----~~v~~~~~~~~~~~~~~~~~--~~~v~~~-~~~~~~~~~s~~~~---- 70 (93)
..+..+.|+| + +..++..... . ..|.+|++..+.... +..+ ...+..+ |+|++..++..+.+
T Consensus 188 ~~~~~~~~sp~d----g~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~ 262 (396)
T 3c5m_A 188 AWLGHPIYRPFD----DSTVGFCHEGPHDLVDARMWLVNEDGSNVRK-IKEHAEGESCTHEFWIPDGSAMAYVSYFKGQT 262 (396)
T ss_dssp SCEEEEEEETTE----EEEEEEEECSCSSSCSCCCEEEETTSCCCEE-SSCCCTTEEEEEEEECTTSSCEEEEEEETTTC
T ss_pred cccccceECCCC----CCEEEEEecCCCCCCCceEEEEECCCCceeE-eeccCCCccccceEECCCCCEEEEEecCCCCc
Confidence 4577889999 6 5555443321 2 468888887655333 3223 2346677 99999876655332
Q ss_pred -CcEEEEeCCCCcee
Q psy14456 71 -RTVRFWDLRTRGCT 84 (93)
Q Consensus 71 -~~i~~~d~~~~~~~ 84 (93)
+.+.+||+.+++..
T Consensus 263 ~~~l~~~d~~~g~~~ 277 (396)
T 3c5m_A 263 DRVIYKANPETLENE 277 (396)
T ss_dssp CEEEEEECTTTCCEE
T ss_pred cceEEEEECCCCCeE
Confidence 34999999887643
No 202
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.62 E-value=0.00052 Score=42.96 Aligned_cols=71 Identities=11% Similarity=0.008 Sum_probs=48.0
Q ss_pred eEEEEEecCCCCcceEEEeeeCCCe-------------EEEEeCCCCc----eeEEeeccccceEEE-EecCCCEEEEec
Q psy14456 7 RDVCFIEDTSNKSSLLISGGAGDCK-------------IYVTDCATGQ----AFQALSGHSGHVLSL-YNWGGATVLSGS 68 (93)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~g~~~~~-------------v~~~~~~~~~----~~~~~~~~~~~v~~~-~~~~~~~~~s~~ 68 (93)
..++|+|+ ++.++.+.. +.. |++|++.++. .+.....+...+..+ |+++++.++..+
T Consensus 171 ~~~~wspD----g~~l~~~~~-d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~ 245 (695)
T 2bkl_A 171 ATPKWTPD----SKGFYYEWL-PTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYI 245 (695)
T ss_dssp CCCEECTT----SSEEEEEEC-CCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEE
T ss_pred cceEEecC----CCEEEEEEe-cCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEE
Confidence 67899999 677766653 444 9999998775 233333444567788 999998887665
Q ss_pred CCC----cEEEEeCCCCc
Q psy14456 69 HDR----TVRFWDLRTRG 82 (93)
Q Consensus 69 ~~~----~i~~~d~~~~~ 82 (93)
.++ .+.+++..++.
T Consensus 246 ~~~~~~~~l~~~~~~~~~ 263 (695)
T 2bkl_A 246 LRGWSENDVYWKRPGEKD 263 (695)
T ss_dssp EETTTEEEEEEECTTCSS
T ss_pred eCCCCceEEEEEcCCCCc
Confidence 444 66666665443
No 203
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.61 E-value=0.00082 Score=42.39 Aligned_cols=60 Identities=18% Similarity=-0.012 Sum_probs=45.9
Q ss_pred CeEEEEeCCCCceeEEeeccccceEEEEecCCCEEEEecCCCcEEEEeCCCCceeeEecC
Q psy14456 30 CKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRGCTNVLTP 89 (93)
Q Consensus 30 ~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~ 89 (93)
+.+..||+.+++.+-....+.......+...+.+++.++.|+.++.||.++|+.+..+..
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~ 514 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPA 514 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred eeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeC
Confidence 779999999999877665433221112455677888899999999999999999887753
No 204
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.54 E-value=0.0011 Score=37.70 Aligned_cols=58 Identities=17% Similarity=0.263 Sum_probs=40.6
Q ss_pred eeEEEEEecCCCCcceEEEeeeC--------------------------CCeEEEEeCCCCceeEEeeccccceEEE-Ee
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAG--------------------------DCKIYVTDCATGQAFQALSGHSGHVLSL-YN 58 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~--------------------------~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~ 58 (93)
+..+.|+|+ ++.++.+... ...|.+|++.+++.+..+.. . .+..+ |+
T Consensus 106 ~~~~~wspd----g~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~s 179 (347)
T 2gop_A 106 IRSLEWNED----SRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWH 179 (347)
T ss_dssp EEEEEECTT----SSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEE
T ss_pred ccceeECCC----CCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCC
Confidence 778999999 6666665422 25688899988876444544 3 66777 99
Q ss_pred cCCCEEEEecCC
Q psy14456 59 WGGATVLSGSHD 70 (93)
Q Consensus 59 ~~~~~~~s~~~~ 70 (93)
|++ .++++..+
T Consensus 180 pdg-~~~~~~~~ 190 (347)
T 2gop_A 180 RDK-IVVNVPHR 190 (347)
T ss_dssp TTE-EEEEEECC
T ss_pred CCe-EEEEEecc
Confidence 999 77766543
No 205
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.54 E-value=0.0021 Score=35.23 Aligned_cols=73 Identities=4% Similarity=0.009 Sum_probs=52.0
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCc
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRG 82 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~ 82 (93)
.+..++++++ +..+++.. .++.|.+|+...................+ +++++.++++...++.+.+||.....
T Consensus 151 ~p~~i~~~~~----g~l~v~~~-~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 151 DPDGVAVDNS----GNVYVTDT-DNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT 224 (270)
T ss_dssp SCCCEEECTT----CCEEEEEG-GGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSC
T ss_pred CceeEEEeCC----CCEEEEEC-CCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCc
Confidence 4567888887 56555544 47899999987665443333333556788 88988888888788899999986543
No 206
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.47 E-value=0.00075 Score=40.42 Aligned_cols=77 Identities=14% Similarity=0.011 Sum_probs=55.5
Q ss_pred EEEEEecCCCCcceEEEeee---------CCCeEEEEeCCCCceeEEeecc-------ccceEEE-EecCCCEEEEecC-
Q psy14456 8 DVCFIEDTSNKSSLLISGGA---------GDCKIYVTDCATGQAFQALSGH-------SGHVLSL-YNWGGATVLSGSH- 69 (93)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~g~---------~~~~v~~~~~~~~~~~~~~~~~-------~~~v~~~-~~~~~~~~~s~~~- 69 (93)
.+.++|+ ++.++.+.. .++.|.++|..+.+.+..+.-- ......+ ++++++.++.+..
T Consensus 122 gia~SpD----gk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~ 197 (426)
T 3c75_H 122 HPVAAED----GSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS 197 (426)
T ss_dssp EEEECTT----SSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS
T ss_pred ceEECCC----CCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC
Confidence 6889998 565555431 3678999999999887766421 1122345 8999998887763
Q ss_pred -CCcEEEEeCCCCceeeEec
Q psy14456 70 -DRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 70 -~~~i~~~d~~~~~~~~~~~ 88 (93)
++.+.+.|..+++.+..+.
T Consensus 198 ~~~~VsVID~~t~kvv~~I~ 217 (426)
T 3c75_H 198 PAPAVGVVDLEGKTFDRMLD 217 (426)
T ss_dssp SSCEEEEEETTTTEEEEEEE
T ss_pred CCCeEEEEECCCCeEEEEEE
Confidence 5789999999988776664
No 207
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.40 E-value=0.0049 Score=34.85 Aligned_cols=75 Identities=11% Similarity=0.101 Sum_probs=49.5
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCC----CeEEEEeCCCCceeEEee--ccccceEEE-EecCCCEEEEecC------
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGD----CKIYVTDCATGQAFQALS--GHSGHVLSL-YNWGGATVLSGSH------ 69 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~----~~v~~~~~~~~~~~~~~~--~~~~~v~~~-~~~~~~~~~s~~~------ 69 (93)
...+.+++++|+ +.++++.. .+ +.|.+|+.+++.....+. .....+..+ +++++.++++...
T Consensus 86 ~~~~~~i~~~~d----g~l~v~~~-~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~ 160 (333)
T 2dg1_A 86 KANPAAIKIHKD----GRLFVCYL-GDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNP 160 (333)
T ss_dssp SSSEEEEEECTT----SCEEEEEC-TTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBC
T ss_pred CCCcceEEECCC----CcEEEEeC-CCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCC
Confidence 356888999988 66666543 34 689999988776543332 234567788 9999988876653
Q ss_pred CCcEEEEeCCCCc
Q psy14456 70 DRTVRFWDLRTRG 82 (93)
Q Consensus 70 ~~~i~~~d~~~~~ 82 (93)
.+.+..+|..+++
T Consensus 161 ~~~l~~~~~~~~~ 173 (333)
T 2dg1_A 161 LGGVYYVSPDFRT 173 (333)
T ss_dssp CEEEEEECTTSCC
T ss_pred CceEEEEeCCCCE
Confidence 2456666665443
No 208
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.37 E-value=0.007 Score=35.93 Aligned_cols=60 Identities=13% Similarity=0.163 Sum_probs=47.0
Q ss_pred CeEEEEeCCCCceeEEeeccccceEEE-EecCCC-EEEE-ecCCCcEEEEeCCCCceeeEecCc
Q psy14456 30 CKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGA-TVLS-GSHDRTVRFWDLRTRGCTNVLTPI 90 (93)
Q Consensus 30 ~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~-~~~s-~~~~~~i~~~d~~~~~~~~~~~~~ 90 (93)
..|.+.|+.+++.+..+.. ...+..+ ++++++ .+++ ...++.+.++|..+++.++.+...
T Consensus 311 ~~V~viD~~t~kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~ 373 (386)
T 3sjl_D 311 RFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL 373 (386)
T ss_dssp EEEEEEETTTCCEEEEEEE-EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC
T ss_pred CEEEEEECCCCeEEEEEEC-CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC
Confidence 5789999999999887753 2355678 999886 5555 456899999999999998888653
No 209
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.31 E-value=0.0025 Score=40.15 Aligned_cols=59 Identities=12% Similarity=0.009 Sum_probs=45.2
Q ss_pred CeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEecC
Q psy14456 30 CKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLTP 89 (93)
Q Consensus 30 ~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~ 89 (93)
+.|..||+.+++.+-.... ....... +...+.+++.++.|+.+.+||.++++.+..+..
T Consensus 457 g~l~A~D~~tG~~~W~~~~-~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~ 516 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEH-VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPT 516 (677)
T ss_dssp EEEEEEETTTTEEEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred cEEEEEeCCCCcEEeecCC-CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeC
Confidence 7899999999988766642 2222333 556677888889999999999999999888753
No 210
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.28 E-value=0.0035 Score=39.42 Aligned_cols=73 Identities=21% Similarity=0.304 Sum_probs=49.0
Q ss_pred ccceeEEEEEecCCCCcceEEEe----eeCCCeEEEEeCCCCceeEE-eeccccceEEE-EecCCCEEEEecCCC-----
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISG----GAGDCKIYVTDCATGQAFQA-LSGHSGHVLSL-YNWGGATVLSGSHDR----- 71 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~~~~~~-~~~~~~~v~~~-~~~~~~~~~s~~~~~----- 71 (93)
...+..++|+|+ +++++-+ |++...|+++|+.+++.+.. +... ....+ |+ +++.++..+.+.
T Consensus 128 ~~~l~~~~~SpD----g~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~--k~~~~~Ws-Dg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 128 TTALDQLSFSRD----GRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDV--KFSGISWL-GNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp CCEEEEEEECTT----SSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEE--ESCCCEEE-TTTEEEEEESSCCC---
T ss_pred cEEEEEEEECCC----CCEEEEEEecCCCceEEEEEEECCCCCCCccccCCc--eeccEEEe-CCCEEEEEEecCccccc
Confidence 346788899999 6766532 33335799999999986543 2111 12345 89 999888776553
Q ss_pred --------cEEEEeCCCCc
Q psy14456 72 --------TVRFWDLRTRG 82 (93)
Q Consensus 72 --------~i~~~d~~~~~ 82 (93)
.|.+|++.+++
T Consensus 201 ~~~~~~~~~v~~~~lgt~~ 219 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQ 219 (693)
T ss_dssp ----CCCCEEEEEETTSCG
T ss_pred ccccCCCcEEEEEECCCCc
Confidence 48889988764
No 211
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.27 E-value=0.0015 Score=40.73 Aligned_cols=70 Identities=16% Similarity=0.075 Sum_probs=51.6
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCc------------eeEEeeccccceEEE-EecCCCEEEEecCCCc
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQ------------AFQALSGHSGHVLSL-YNWGGATVLSGSHDRT 72 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~------------~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~ 72 (93)
..++.++|+ +++++.++..+..+.++|+.+.. .......- .....+ |++++....+.-.|++
T Consensus 279 PhGv~~sPD----Gk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG-~gP~h~aF~~dG~aY~t~~ldsq 353 (595)
T 1fwx_A 279 PHGCNMAPD----KKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG-LGPLHTAFDGRGNAYTSLFLDSQ 353 (595)
T ss_dssp CCCEEECTT----SSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC-SCEEEEEECTTSEEEEEETTTTE
T ss_pred ceEEEEcCC----CCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC-CCcceEEECCCCeEEEEEecCCc
Confidence 456888999 78887777679999999998652 23333322 334566 9999955567779999
Q ss_pred EEEEeCCC
Q psy14456 73 VRFWDLRT 80 (93)
Q Consensus 73 i~~~d~~~ 80 (93)
+.+||+.+
T Consensus 354 V~kwdi~~ 361 (595)
T 1fwx_A 354 VVKWNIED 361 (595)
T ss_dssp EEEEEHHH
T ss_pred EEEEEhhH
Confidence 99999887
No 212
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.26 E-value=0.0079 Score=34.37 Aligned_cols=78 Identities=15% Similarity=0.168 Sum_probs=52.9
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccc-----cceEEE-EecCCCEEEEec-CCCcEEEEe
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHS-----GHVLSL-YNWGGATVLSGS-HDRTVRFWD 77 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~-----~~v~~~-~~~~~~~~~s~~-~~~~i~~~d 77 (93)
....++++++ +..+++.. .++.|.++|..+++....+.... .....+ + .++.++++.. .++.|.++|
T Consensus 85 ~p~~i~~~~~----g~lyv~~~-~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD 158 (328)
T 3dsm_A 85 SPRYIHFLSD----EKAYVTQI-WDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKID 158 (328)
T ss_dssp SEEEEEEEET----TEEEEEEB-SCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEE
T ss_pred CCcEEEEeCC----CeEEEEEC-CCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEE
Confidence 4567888887 65444443 48999999999988776664322 133455 5 3444455543 488999999
Q ss_pred CCCCceeeEec
Q psy14456 78 LRTRGCTNVLT 88 (93)
Q Consensus 78 ~~~~~~~~~~~ 88 (93)
..+++....+.
T Consensus 159 ~~t~~~~~~i~ 169 (328)
T 3dsm_A 159 TETDKVVDELT 169 (328)
T ss_dssp TTTTEEEEEEE
T ss_pred CCCCeEEEEEE
Confidence 99988777664
No 213
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.25 E-value=0.0081 Score=34.29 Aligned_cols=77 Identities=14% Similarity=0.109 Sum_probs=50.2
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCC--CC-ce-----eEEeeccccceEEE-EecCCCEEEEecCCCcEEEE
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCA--TG-QA-----FQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFW 76 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~--~~-~~-----~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~ 76 (93)
...++|+|+ ++.++.+...++.|.+|+.+ ++ .. ...+.........+ +.+++.++++...++.|..|
T Consensus 181 ~~~i~~s~d----g~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~ 256 (326)
T 2ghs_A 181 PNSICFSPD----GTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRY 256 (326)
T ss_dssp EEEEEECTT----SCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEE
T ss_pred cCCeEEcCC----CCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEE
Confidence 457888888 66555555457899999975 55 31 22222223445667 88888888776667889999
Q ss_pred eCCCCceeeEe
Q psy14456 77 DLRTRGCTNVL 87 (93)
Q Consensus 77 d~~~~~~~~~~ 87 (93)
|. +++.+..+
T Consensus 257 d~-~g~~~~~i 266 (326)
T 2ghs_A 257 DT-DGNHIARY 266 (326)
T ss_dssp CT-TCCEEEEE
T ss_pred CC-CCCEEEEE
Confidence 98 45554444
No 214
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.17 E-value=0.01 Score=34.04 Aligned_cols=82 Identities=16% Similarity=0.043 Sum_probs=55.3
Q ss_pred cceeEEEEEecCCCCcceEEEeeeC----CCeEEEEeCCCCceeEEeec------cccceEEE-EecC-CCEEEEec---
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAG----DCKIYVTDCATGQAFQALSG------HSGHVLSL-YNWG-GATVLSGS--- 68 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~----~~~v~~~~~~~~~~~~~~~~------~~~~v~~~-~~~~-~~~~~s~~--- 68 (93)
..+..++++++ +.++++-... +..|.+||+.+++.+..+.- +......+ ++++ +..+++-.
T Consensus 67 ~~p~gv~~d~~----g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~ 142 (343)
T 2qe8_A 67 DTVLGIKSDGN----GIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD 142 (343)
T ss_dssp SCEEEEEECSS----SEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG
T ss_pred eEeeEEEEcCC----CcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC
Confidence 56888999887 5555543111 47899999998886655532 12345677 8875 45556655
Q ss_pred CCCcEEEEeCCCCceeeEecC
Q psy14456 69 HDRTVRFWDLRTRGCTNVLTP 89 (93)
Q Consensus 69 ~~~~i~~~d~~~~~~~~~~~~ 89 (93)
.++.+.+||+.++...+.+..
T Consensus 143 ~~~~i~v~d~~~g~~~r~~~~ 163 (343)
T 2qe8_A 143 DKAALIRVDLQTGLAARVLQG 163 (343)
T ss_dssp GGCEEEEEETTTCCEEEECTT
T ss_pred CCCeEEEEECCCCCEEEEecC
Confidence 678999999998877666543
No 215
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.11 E-value=0.013 Score=34.69 Aligned_cols=72 Identities=11% Similarity=0.081 Sum_probs=49.7
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCC--cEEEEeCCCC
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDR--TVRFWDLRTR 81 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~--~i~~~d~~~~ 81 (93)
....++|+++ ++++++.. .++.|+.||..++............ . + |++++..++.+..++ .+..++...+
T Consensus 132 ~P~~la~d~~----g~lyv~d~-~~~~I~~id~~~g~~~~~~~~~~~~-~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~ 204 (409)
T 3hrp_A 132 YMWGIAAVGN----NTVLAYQR-DDPRVRLISVDDNKVTTVHPGFKGG-K-PAVTKDKQRVYSIGWEGTHTVYVYMKASG 204 (409)
T ss_dssp CEEEEEECST----TEEEEEET-TTTEEEEEETTTTEEEEEEETCCBC-B-CEECTTSSEEEEEBSSTTCEEEEEEGGGT
T ss_pred CceEEEEeCC----CCEEEEec-CCCcEEEEECCCCEEEEeeccCCCC-c-eeEecCCCcEEEEecCCCceEEEEEcCCC
Confidence 4678889887 56555543 5799999999877665444332222 3 6 899988888777655 7888887655
Q ss_pred ce
Q psy14456 82 GC 83 (93)
Q Consensus 82 ~~ 83 (93)
..
T Consensus 205 ~~ 206 (409)
T 3hrp_A 205 WA 206 (409)
T ss_dssp TC
T ss_pred ce
Confidence 44
No 216
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.05 E-value=0.0076 Score=35.47 Aligned_cols=56 Identities=14% Similarity=0.023 Sum_probs=45.6
Q ss_pred eEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEec----------CCCcEEEEeCCCCceeeEec
Q psy14456 31 KIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGS----------HDRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 31 ~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~----------~~~~i~~~d~~~~~~~~~~~ 88 (93)
.+.+.|..+++.+..+..-..+ .+ ++|++..+..+. .++.+.+||..+++....+.
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~ 113 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIE 113 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEE
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEE
Confidence 8889999999999888644445 57 999988777665 36889999999999888874
No 217
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=96.96 E-value=0.016 Score=32.58 Aligned_cols=69 Identities=10% Similarity=-0.024 Sum_probs=49.3
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
......|+|+ ++.++.++..++.+..|+. .+. ...+......+..+ ++++++++++...++.|..|+..
T Consensus 46 ~~egp~~~~~----g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~ 115 (305)
T 3dr2_A 46 WSEGPAWWEA----QRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD 115 (305)
T ss_dssp SEEEEEEEGG----GTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CccCCeEeCC----CCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC
Confidence 3567889998 6655555556899999987 444 33444455667788 99999977766666789999875
No 218
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.88 E-value=0.02 Score=32.18 Aligned_cols=70 Identities=16% Similarity=0.043 Sum_probs=48.9
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCce
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGC 83 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~ 83 (93)
-.+..|+|+ ...++.+...++.|..|+..++... .+. ....+.++ +.+++.++++. +..+.+||..+++.
T Consensus 15 ~Egp~w~~~----~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~ 85 (297)
T 3g4e_A 15 GESPVWEEV----SNSLLFVDIPAKKVCRWDSFTKQVQ-RVT-MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSA 85 (297)
T ss_dssp EEEEEEETT----TTEEEEEETTTTEEEEEETTTCCEE-EEE-CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEE
T ss_pred ccCCeEECC----CCEEEEEECCCCEEEEEECCCCcEE-EEe-CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcE
Confidence 457788886 3444444556899999998877652 232 34567788 99999866654 56889999887654
No 219
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.87 E-value=0.021 Score=32.36 Aligned_cols=75 Identities=9% Similarity=0.049 Sum_probs=50.5
Q ss_pred eEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCC-CEEEEecCCCcEEEEeCCCCcee
Q psy14456 7 RDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGG-ATVLSGSHDRTVRFWDLRTRGCT 84 (93)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~-~~~~s~~~~~~i~~~d~~~~~~~ 84 (93)
..+.|+. +.++.+.| .++.|+++|+++++.+..+. ....... ....+ .+....-.++.+.++|..+.+.+
T Consensus 58 qGL~~~~-----~~Ly~stG-~~g~v~~iD~~Tgkv~~~~l--~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~ 129 (268)
T 3nok_A 58 QGLVFHQ-----GHFFESTG-HQGTLRQLSLESAQPVWMER--LGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRE 129 (268)
T ss_dssp EEEEEET-----TEEEEEET-TTTEEEECCSSCSSCSEEEE--CTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEE
T ss_pred ceEEEEC-----CEEEEEcC-CCCEEEEEECCCCcEEeEEC--CCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEE
Confidence 4566652 56777777 58899999999998877662 2222222 23333 44444446889999999999888
Q ss_pred eEecC
Q psy14456 85 NVLTP 89 (93)
Q Consensus 85 ~~~~~ 89 (93)
..|..
T Consensus 130 ~ti~~ 134 (268)
T 3nok_A 130 RTTRY 134 (268)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 88763
No 220
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.78 E-value=0.044 Score=34.77 Aligned_cols=73 Identities=12% Similarity=0.034 Sum_probs=47.2
Q ss_pred ceeEEEEEecCCCCcceEEEeeeC----CCeEEEEeCCCC--ceeEEeeccccceEEEEecCCCEEEEecC----CCcEE
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAG----DCKIYVTDCATG--QAFQALSGHSGHVLSLYNWGGATVLSGSH----DRTVR 74 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~----~~~v~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~s~~~----~~~i~ 74 (93)
.+..+.|+|+ ++.++....+ ...+.+||+.++ .+...+..+.......+.+++..++..+. +..|.
T Consensus 269 ~~~~~~~SpD----G~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~ 344 (741)
T 1yr2_A 269 RGHGASVSSD----GRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIV 344 (741)
T ss_dssp CEEEEEECTT----SCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEE
T ss_pred EEEEEEECCC----CCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEE
Confidence 4778899999 6766655532 348899998776 31445555554444444577777665543 34599
Q ss_pred EEeCCCC
Q psy14456 75 FWDLRTR 81 (93)
Q Consensus 75 ~~d~~~~ 81 (93)
+||+.++
T Consensus 345 ~~d~~~~ 351 (741)
T 1yr2_A 345 RVDLSGS 351 (741)
T ss_dssp EEECSSS
T ss_pred EEeCCCC
Confidence 9998874
No 221
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.75 E-value=0.023 Score=31.30 Aligned_cols=70 Identities=10% Similarity=0.113 Sum_probs=50.4
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeE-EeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQ-ALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~-~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
..+.++++.++ +..+++.. .++.|..|+.. +.... ........+..+ +.+++.++++...++.+..||..
T Consensus 15 ~~~~~i~~d~~----g~l~v~~~-~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 86 (299)
T 2z2n_A 15 TGPYGITVSDK----GKVWITQH-KANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK 86 (299)
T ss_dssp CCEEEEEECTT----SCEEEEET-TTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCccceEECCC----CCEEEEec-CCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC
Confidence 46788888887 66666654 37899999988 54332 222234567788 88888888887778889999876
No 222
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=96.59 E-value=0.038 Score=31.55 Aligned_cols=71 Identities=13% Similarity=-0.077 Sum_probs=48.4
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCcee
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCT 84 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~ 84 (93)
.....|+|+ +..++.++..++.|..|+.+++... .+. ....+.++ +.+++.++++. +..+.+||..++...
T Consensus 51 ~egp~~~~~----~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~--~~gl~~~d~~~g~~~ 122 (326)
T 2ghs_A 51 GEGPTFDPA----SGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS--DDGLFLRDTATGVLT 122 (326)
T ss_dssp EEEEEEETT----TTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE--TTEEEEEETTTCCEE
T ss_pred CcCCeEeCC----CCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE--CCCEEEEECCCCcEE
Confidence 357788887 3444444546889999998877543 232 24567888 89998877765 334888998877643
No 223
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.58 E-value=0.032 Score=30.73 Aligned_cols=72 Identities=10% Similarity=-0.006 Sum_probs=48.9
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCce-eEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQA-FQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~ 81 (93)
..+..+++.++ +..+++.. .++.|..|+.. +.. ...+......+..+ +.+++.++++...++.+..||. ++
T Consensus 57 ~~~~~i~~~~~----g~l~v~~~-~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g 129 (299)
T 2z2n_A 57 AKVMCLTISSD----GEVWFTEN-AANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DG 129 (299)
T ss_dssp CCEEEEEECTT----SCEEEEET-TTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TC
T ss_pred CceeeEEECCC----CCEEEeCC-CCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CC
Confidence 45777888876 56666644 47889999876 332 12222234466788 8888888888777888999988 44
Q ss_pred c
Q psy14456 82 G 82 (93)
Q Consensus 82 ~ 82 (93)
.
T Consensus 130 ~ 130 (299)
T 2z2n_A 130 K 130 (299)
T ss_dssp C
T ss_pred C
Confidence 3
No 224
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.56 E-value=0.035 Score=34.45 Aligned_cols=60 Identities=15% Similarity=-0.066 Sum_probs=42.8
Q ss_pred CCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEecC
Q psy14456 29 DCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLTP 89 (93)
Q Consensus 29 ~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~ 89 (93)
++.+..+|..+++.+-.+... ..+... +...+..++.++.|+.+..+|.++++.+..+..
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~ 503 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKM 503 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCeEEEEECCCCCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeC
Confidence 578999999999887665422 122222 333456677788999999999999998877753
No 225
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.48 E-value=0.035 Score=35.04 Aligned_cols=60 Identities=8% Similarity=-0.017 Sum_probs=44.3
Q ss_pred CCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEecC
Q psy14456 29 DCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLTP 89 (93)
Q Consensus 29 ~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~ 89 (93)
++.|..||+.+++.+-....... .... +...+.+++.++.|+.+.+||.++++.+..+..
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~~-~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~ 497 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPTH-WNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEA 497 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESSS-CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred cceEEEEeCCCCcEEEEccCCCC-CcCceeEeCCCEEEEECCcccchhhhhhcChhheEecC
Confidence 47899999999988765543222 1212 344677888889999999999999998877743
No 226
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.39 E-value=0.063 Score=31.85 Aligned_cols=70 Identities=10% Similarity=0.076 Sum_probs=48.0
Q ss_pred EEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccc---------------cceEEE-EecCCCEEEEec-CC
Q psy14456 8 DVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHS---------------GHVLSL-YNWGGATVLSGS-HD 70 (93)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~---------------~~v~~~-~~~~~~~~~s~~-~~ 70 (93)
.++|+|++ +.++++ ...++.|..|+.+.. +..+.++. .....+ +++++.++++-. .+
T Consensus 271 ~ia~~p~~---g~lyv~-d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~ 344 (409)
T 3hrp_A 271 YLIYYFVD---SNFYMS-DQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKG 344 (409)
T ss_dssp EEEEETTT---TEEEEE-ETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTT
T ss_pred cEEEeCCC---CEEEEE-eCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCC
Confidence 88999852 444444 445889999987643 22232221 335678 999999888877 88
Q ss_pred CcEEEEeCCCCce
Q psy14456 71 RTVRFWDLRTRGC 83 (93)
Q Consensus 71 ~~i~~~d~~~~~~ 83 (93)
+.|..|++.++..
T Consensus 345 ~~I~~~~~~~G~v 357 (409)
T 3hrp_A 345 YCLRKLDILDGYV 357 (409)
T ss_dssp CEEEEEETTTTEE
T ss_pred CEEEEEECCCCEE
Confidence 9999999777654
No 227
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=96.37 E-value=0.00067 Score=39.55 Aligned_cols=62 Identities=24% Similarity=0.235 Sum_probs=32.1
Q ss_pred eEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEe
Q psy14456 21 LLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVL 87 (93)
Q Consensus 21 ~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~ 87 (93)
.+++++ .++.+..||.++|+.+..+..+. .. +.|++..++.++.++.+..||.++|+.+..+
T Consensus 94 ~v~~g~-~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 94 ILYMGK-KQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNA 156 (369)
T ss_dssp -CCCCE-EEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEE
T ss_pred EEEEEe-CCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeE
Confidence 344444 58999999999998877665432 23 5667778888888999999999998765443
No 228
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.36 E-value=0.053 Score=30.62 Aligned_cols=77 Identities=10% Similarity=0.124 Sum_probs=52.2
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCC--eEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEec-CCCcEEEEeCCCC
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDC--KIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGS-HDRTVRFWDLRTR 81 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~--~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~-~~~~i~~~d~~~~ 81 (93)
...+.|+ + +.++.+.|. ++ .|+.+|+++++.+..+.-.. ..... ..+.+..+.... .++.+.++|..+.
T Consensus 45 tqGL~~~-~----~~LyestG~-~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~ 117 (262)
T 3nol_A 45 TEGFFYR-N----GYFYESTGL-NGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNL 117 (262)
T ss_dssp EEEEEEE-T----TEEEEEEEE-TTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTTC
T ss_pred cceEEEE-C----CEEEEECCC-CCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEEEEEECccC
Confidence 3566776 4 567777774 65 89999999999887775322 22222 333444444443 6789999999999
Q ss_pred ceeeEecC
Q psy14456 82 GCTNVLTP 89 (93)
Q Consensus 82 ~~~~~~~~ 89 (93)
+.+..+..
T Consensus 118 ~~~~ti~~ 125 (262)
T 3nol_A 118 RQVRSFNY 125 (262)
T ss_dssp CEEEEEEC
T ss_pred cEEEEEEC
Confidence 88887753
No 229
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=96.33 E-value=0.079 Score=32.35 Aligned_cols=59 Identities=22% Similarity=0.341 Sum_probs=44.8
Q ss_pred CeEEEEeCCCCceeEEeecccc---ceEEE-EecCCCEEEEec-------------------CCCcEEEEeCCCCceeeE
Q psy14456 30 CKIYVTDCATGQAFQALSGHSG---HVLSL-YNWGGATVLSGS-------------------HDRTVRFWDLRTRGCTNV 86 (93)
Q Consensus 30 ~~v~~~~~~~~~~~~~~~~~~~---~v~~~-~~~~~~~~~s~~-------------------~~~~i~~~d~~~~~~~~~ 86 (93)
+.+.+.|.++.+.+..+..-.. .-+.+ |+|+++.+++.. .+..|.+||+.+++.++.
T Consensus 164 g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~t 243 (462)
T 2ece_A 164 GGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHS 243 (462)
T ss_dssp CEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEE
T ss_pred CeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeE
Confidence 7899999999998888853222 22346 899999888884 368999999998876666
Q ss_pred ec
Q psy14456 87 LT 88 (93)
Q Consensus 87 ~~ 88 (93)
+.
T Consensus 244 I~ 245 (462)
T 2ece_A 244 LT 245 (462)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 230
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=96.32 E-value=0.027 Score=32.32 Aligned_cols=79 Identities=13% Similarity=0.121 Sum_probs=49.0
Q ss_pred ceeEEEEEecCCCCcceEEEee-eCCCeEEEEeCCCCceeEEee-------ccccceEEE-EecCCCEEEEecC-----C
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGG-AGDCKIYVTDCATGQAFQALS-------GHSGHVLSL-YNWGGATVLSGSH-----D 70 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g-~~~~~v~~~~~~~~~~~~~~~-------~~~~~v~~~-~~~~~~~~~s~~~-----~ 70 (93)
....++++|+ ++.+++.. ..++.+++|.+..+.. ..+. .+...+..+ +++++.++++-.. +
T Consensus 18 ~p~~va~~~~----g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~ 92 (343)
T 2qe8_A 18 APGNITLTPD----GRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSV 92 (343)
T ss_dssp CEEEEEECTT----SCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSC
T ss_pred CcceEEECCC----CCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCC
Confidence 5678888887 67777642 1133244554444432 2221 234567888 8988876665433 5
Q ss_pred CcEEEEeCCCCceeeEec
Q psy14456 71 RTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 71 ~~i~~~d~~~~~~~~~~~ 88 (93)
..|.+||+.+++.++.+.
T Consensus 93 ~~i~~~d~~tg~~~~~~~ 110 (343)
T 2qe8_A 93 PKLVAWDTLNNQLSRVIY 110 (343)
T ss_dssp CEEEEEETTTTEEEEEEE
T ss_pred CeEEEEECCCCeEEEEEE
Confidence 789999999888666553
No 231
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.29 E-value=0.048 Score=34.00 Aligned_cols=60 Identities=13% Similarity=0.123 Sum_probs=42.9
Q ss_pred CCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEecC
Q psy14456 29 DCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLTP 89 (93)
Q Consensus 29 ~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~~ 89 (93)
.+.+..||+.+++.+-...... ....- ....+.+++.++.|+.++.+|.++|+.+..+..
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~ 525 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQT 525 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred cceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecC
Confidence 5789999999998775554221 11111 233466777899999999999999998877753
No 232
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.25 E-value=0.062 Score=30.34 Aligned_cols=78 Identities=15% Similarity=0.087 Sum_probs=53.1
Q ss_pred eeEEEEEecCCCCcceEEEeee-CCCeEEEEeCCCCceeEEeecccc-ceEEEEecCC-CEEEEecCCCcEEEEeCCCCc
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGA-GDCKIYVTDCATGQAFQALSGHSG-HVLSLYNWGG-ATVLSGSHDRTVRFWDLRTRG 82 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~-~~~~v~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~-~~~~s~~~~~~i~~~d~~~~~ 82 (93)
...+.|+++ +.+++++|. .++.|.+.|..+++.+..+.-... ....+ ..++ .+.++.-.++.+.++|..+.+
T Consensus 23 ~~Gl~~~~d----g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi-~~~g~~lyv~t~~~~~v~viD~~t~~ 97 (266)
T 2iwa_A 23 TQGLVYAEN----DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGL-TLLNEKLYQVVWLKNIGFIYDRRTLS 97 (266)
T ss_dssp EEEEEECST----TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEE-EEETTEEEEEETTCSEEEEEETTTTE
T ss_pred cccEEEeCC----CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEE-EEeCCEEEEEEecCCEEEEEECCCCc
Confidence 467888886 566666662 268999999999998877642221 11233 3334 444455578899999999988
Q ss_pred eeeEec
Q psy14456 83 CTNVLT 88 (93)
Q Consensus 83 ~~~~~~ 88 (93)
.+..+.
T Consensus 98 v~~~i~ 103 (266)
T 2iwa_A 98 NIKNFT 103 (266)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 888774
No 233
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=96.10 E-value=0.032 Score=34.00 Aligned_cols=69 Identities=12% Similarity=0.132 Sum_probs=48.3
Q ss_pred cceEEEeeeCCCeEEEEeCCCC----ceeEEee------c-cccceEEE-EecCCCEEEEecCC------CcEEEEeCCC
Q psy14456 19 SSLLISGGAGDCKIYVTDCATG----QAFQALS------G-HSGHVLSL-YNWGGATVLSGSHD------RTVRFWDLRT 80 (93)
Q Consensus 19 ~~~~~~~g~~~~~v~~~~~~~~----~~~~~~~------~-~~~~v~~~-~~~~~~~~~s~~~~------~~i~~~d~~~ 80 (93)
+++++..|..+..|.++|+.+. +....+. . -......+ ..|++ .++++..+ +.+.+.|..+
T Consensus 95 r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T 173 (462)
T 2ece_A 95 RRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYS 173 (462)
T ss_dssp SCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTT
T ss_pred CCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCC
Confidence 6777777778999999998755 4445552 0 11133455 67888 66666555 7899999999
Q ss_pred CceeeEec
Q psy14456 81 RGCTNVLT 88 (93)
Q Consensus 81 ~~~~~~~~ 88 (93)
.+.+..+.
T Consensus 174 ~~v~~~~~ 181 (462)
T 2ece_A 174 FEPLGKWE 181 (462)
T ss_dssp CCEEEECC
T ss_pred CeEEEEEc
Confidence 98887775
No 234
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=95.94 E-value=0.093 Score=29.64 Aligned_cols=66 Identities=8% Similarity=0.036 Sum_probs=45.9
Q ss_pred eEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEEEecCCCEEEEecCCCcEEEEeCCCCceeeEec
Q psy14456 21 LLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 21 ~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~ 88 (93)
.+....-+++.+.++|.++.+.+.++..-... .. +.+++..++....+..+.++|..+.+.+..+.
T Consensus 98 ~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG-~g-lt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~ 163 (262)
T 3nol_A 98 KIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEG-WG-LTHNDQYLIMSDGTPVLRFLDPESLTPVRTIT 163 (262)
T ss_dssp EEEEEESSSSEEEEEETTTCCEEEEEECSSCC-CC-EEECSSCEEECCSSSEEEEECTTTCSEEEEEE
T ss_pred EEEEEEeeCCEEEEEECccCcEEEEEECCCCc-eE-EecCCCEEEEECCCCeEEEEcCCCCeEEEEEE
Confidence 33333336999999999999998888642221 12 45566666666667889999999887766654
No 235
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.82 E-value=0.11 Score=29.47 Aligned_cols=66 Identities=5% Similarity=-0.039 Sum_probs=47.5
Q ss_pred ceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEEEecCCCEEEEecCCCcEEEEeCCCCceeeEec
Q psy14456 20 SLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 20 ~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~ 88 (93)
..+.+.. +++.+.++|.++.+.+.++..-... .. +.+++..++....++.+.++|..+.+.+..+.
T Consensus 107 ~Ly~ltw-~~~~v~V~D~~Tl~~~~ti~~~~eG-wG-Lt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~ 172 (268)
T 3nok_A 107 RLYQLTW-TEGLLFTWSGMPPQRERTTRYSGEG-WG-LCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQ 172 (268)
T ss_dssp CEEEEES-SSCEEEEEETTTTEEEEEEECSSCC-CC-EEEETTEEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred EEEEEEc-cCCEEEEEECCcCcEEEEEeCCCce-eE-EecCCCEEEEECCCCEEEEEcCCCCeEEEEEE
Confidence 3444443 6999999999999998888642221 22 45567777766678999999999988777664
No 236
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=95.71 E-value=0.12 Score=29.18 Aligned_cols=68 Identities=12% Similarity=0.066 Sum_probs=48.5
Q ss_pred cceEEEeeeCCCeEEEEeCCCCceeEEeeccc--c---ceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEec
Q psy14456 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGHS--G---HVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 19 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~--~---~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~ 88 (93)
++.++.+. .++.+.+.|..+.+.+..+.-.. . ....+ |. ++.+++..-.+..|.+.|..+++.+..+.
T Consensus 116 g~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~ 189 (266)
T 2iwa_A 116 GKILYGSD-GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWIL 189 (266)
T ss_dssp SSSEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEC-CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEE
Confidence 44455544 47899999999988777665221 1 24556 66 67666666678899999999999877774
No 237
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.67 E-value=0.11 Score=28.55 Aligned_cols=73 Identities=14% Similarity=0.121 Sum_probs=50.4
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeE-EeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQ-ALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~-~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~ 81 (93)
....++.+.++ +...++.. .++.|.+++.. +.... .+......+..+ +.+++.++++...++.+..+|.. +
T Consensus 20 ~~p~~i~~d~~----g~l~v~~~-~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g 92 (300)
T 2qc5_A 20 SGPYGITSSED----GKVWFTQH-KANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-G 92 (300)
T ss_dssp CCEEEEEECTT----SCEEEEET-TTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CCcceeeECCC----CCEEEEcC-CCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-C
Confidence 35677888777 56666554 47899999987 54432 222233567788 88888888877777889999877 4
Q ss_pred ce
Q psy14456 82 GC 83 (93)
Q Consensus 82 ~~ 83 (93)
..
T Consensus 93 ~~ 94 (300)
T 2qc5_A 93 GF 94 (300)
T ss_dssp CE
T ss_pred Ce
Confidence 43
No 238
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.60 E-value=0.12 Score=28.42 Aligned_cols=73 Identities=10% Similarity=-0.000 Sum_probs=49.3
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCcee-EEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAF-QALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~ 81 (93)
..+..+++.++ +..+++.. .++.|..++.. +... .........+..+ +.+++.++++...++.+..+|.. +
T Consensus 62 ~~~~~i~~~~~----g~l~v~~~-~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g 134 (300)
T 2qc5_A 62 AKVMCLIVSSL----GDIWFTEN-GANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-G 134 (300)
T ss_dssp CCEEEEEECTT----SCEEEEET-TTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-S
T ss_pred CcceeEEECCC----CCEEEEec-CCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-C
Confidence 35677777776 56555543 47889999877 5543 2222233566788 88888888887777888889876 4
Q ss_pred ce
Q psy14456 82 GC 83 (93)
Q Consensus 82 ~~ 83 (93)
..
T Consensus 135 ~~ 136 (300)
T 2qc5_A 135 TI 136 (300)
T ss_dssp CE
T ss_pred CE
Confidence 43
No 239
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.42 E-value=0.14 Score=31.24 Aligned_cols=70 Identities=16% Similarity=0.171 Sum_probs=50.3
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCc------------eeEEeec------cccceEEE-EecC---CC
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQ------------AFQALSG------HSGHVLSL-YNWG---GA 62 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~------------~~~~~~~------~~~~v~~~-~~~~---~~ 62 (93)
.+..+..+|+ +.+++..| +..|.+-.+..+. ..+.+.- ...+|..+ |+|- +.
T Consensus 67 ~i~qlvlSps----G~lLAl~g--~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds 140 (452)
T 3pbp_A 67 DTFHVISSTS----GDLLCLFN--DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDS 140 (452)
T ss_dssp TTCEEEECTT----SSEEEEEC--SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGC
T ss_pred ceeEEEECCC----CCEEEEec--CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCC
Confidence 4566788888 78888876 6788888876331 1112221 24568888 9994 56
Q ss_pred EEEEecCCCcEEEEeCCC
Q psy14456 63 TVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 63 ~~~s~~~~~~i~~~d~~~ 80 (93)
.+++-..|+.|++||+..
T Consensus 141 ~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 141 CIVVLKEDDTITMFDILN 158 (452)
T ss_dssp EEEEEETTSCEEEEETTC
T ss_pred eEEEEecCCEEEEEEccc
Confidence 888889999999999986
No 240
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.32 E-value=0.17 Score=28.28 Aligned_cols=66 Identities=14% Similarity=-0.008 Sum_probs=46.2
Q ss_pred eEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEEEecCCCEEEEecCCCcEEEEeCCCCceeeEec
Q psy14456 21 LLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 21 ~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~ 88 (93)
.+....-+++.+.++|.++.+.+.++...... .. +.+++..+.....++.+.++|..+.+.+..+.
T Consensus 76 ~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~G-wg-lt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~ 141 (243)
T 3mbr_X 76 RLIQLTWRNHEGFVYDLATLTPRARFRYPGEG-WA-LTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIK 141 (243)
T ss_dssp EEEEEESSSSEEEEEETTTTEEEEEEECSSCC-CE-EEECSSCEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred EEEEEEeeCCEEEEEECCcCcEEEEEeCCCCc-eE-EeeCCCEEEEECCCCeEEEEeCCCCeEEEEEE
Confidence 33333447999999999999998888643222 23 34556655555668899999999988777664
No 241
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=95.28 E-value=0.3 Score=30.95 Aligned_cols=75 Identities=21% Similarity=0.272 Sum_probs=45.9
Q ss_pred ceeEEEEEecCCCCcceEEEeeeC---CCeEEEEeCCCCc-eeEEeeccccceEEEEecCC-CEEEEecCC---CcEEEE
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAG---DCKIYVTDCATGQ-AFQALSGHSGHVLSLYNWGG-ATVLSGSHD---RTVRFW 76 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~---~~~v~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~-~~~~s~~~~---~~i~~~ 76 (93)
.+..+.|+|+ ++.++.+... ...+.++++.++. ....+..+.......+.+++ .+++....+ ..|..+
T Consensus 235 ~~~~~~~SpD----g~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~ 310 (693)
T 3iuj_A 235 RYVGATVTED----DRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTV 310 (693)
T ss_dssp SEEEEEECTT----SCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEE
T ss_pred EEEEEEEcCC----CCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEE
Confidence 4677889998 5665433321 3588999987763 34555555555444444544 444454443 578889
Q ss_pred eCCCCce
Q psy14456 77 DLRTRGC 83 (93)
Q Consensus 77 d~~~~~~ 83 (93)
|+.++..
T Consensus 311 d~~~~~~ 317 (693)
T 3iuj_A 311 DAANPGP 317 (693)
T ss_dssp ETTSCCG
T ss_pred eCCCCCc
Confidence 9987654
No 242
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=94.84 E-value=0.25 Score=27.72 Aligned_cols=74 Identities=14% Similarity=0.183 Sum_probs=49.7
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEee-ccccceEEE-EecCCCEEEEecCCCcEEEEeCCCC
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALS-GHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~-~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~ 81 (93)
+.+..++|.|+ +..+++....++.|...|.. +..+..+. +-....-.+ +..++.++++.-.++.+.++++...
T Consensus 27 ~~lSGla~~~~----~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~ 101 (255)
T 3qqz_A 27 NNISSLTWSAQ----SNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPN 101 (255)
T ss_dssp SCEEEEEEETT----TTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTT
T ss_pred cCcceeEEeCC----CCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCC
Confidence 45889999988 55566555568899988987 77766653 111334556 6667766666556677888876654
Q ss_pred c
Q psy14456 82 G 82 (93)
Q Consensus 82 ~ 82 (93)
.
T Consensus 102 ~ 102 (255)
T 3qqz_A 102 S 102 (255)
T ss_dssp C
T ss_pred C
Confidence 3
No 243
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=94.58 E-value=0.3 Score=27.44 Aligned_cols=70 Identities=11% Similarity=0.137 Sum_probs=42.4
Q ss_pred eeEEEEEecCCCCcceEEEe---eeC-------------CCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEec
Q psy14456 6 VRDVCFIEDTSNKSSLLISG---GAG-------------DCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGS 68 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~---g~~-------------~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~ 68 (93)
+..+++.|+ +..+++- |.. .+.|..++..+++..... .......+ |++++..+..+.
T Consensus 133 ~~~i~~d~d----G~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~ 206 (305)
T 3dr2_A 133 PNDLIVARD----GAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQ 206 (305)
T ss_dssp CCCEEECTT----SCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEE
T ss_pred CCCEEECCC----CCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEe
Confidence 456778777 5666641 111 245666666556543322 33345677 999998766555
Q ss_pred CC------CcEEEEeCCCC
Q psy14456 69 HD------RTVRFWDLRTR 81 (93)
Q Consensus 69 ~~------~~i~~~d~~~~ 81 (93)
.. +.|..|++..+
T Consensus 207 ~~~~~~~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 207 TPEQGHGSVEITAFAWRDG 225 (305)
T ss_dssp CCC---CCCEEEEEEEETT
T ss_pred cCCcCCCCCEEEEEEecCC
Confidence 44 68899988654
No 244
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=94.45 E-value=0.55 Score=29.95 Aligned_cols=56 Identities=13% Similarity=0.129 Sum_probs=39.1
Q ss_pred eEEEEeCCCCceeEEeec--cc-------cceEEE-EecCCC---EEEEecCCCcEEEEeCCCCceeeE
Q psy14456 31 KIYVTDCATGQAFQALSG--HS-------GHVLSL-YNWGGA---TVLSGSHDRTVRFWDLRTRGCTNV 86 (93)
Q Consensus 31 ~v~~~~~~~~~~~~~~~~--~~-------~~v~~~-~~~~~~---~~~s~~~~~~i~~~d~~~~~~~~~ 86 (93)
.|..+|.++++.+-.++. |. ...... ...++. .++.++.++.+.++|.++|+.+..
T Consensus 276 ~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~ 344 (689)
T 1yiq_A 276 SIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSA 344 (689)
T ss_dssp EEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred eEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecc
Confidence 499999999998776653 21 112222 233554 678889999999999999987643
No 245
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=94.27 E-value=0.2 Score=32.13 Aligned_cols=71 Identities=13% Similarity=0.034 Sum_probs=44.3
Q ss_pred ceeEEEEE-ecCCCCcceEEEeeeCCC----eEEEEeCCCC-ceeE-EeeccccceEEE-EecCCCEEEEecCC-----C
Q psy14456 5 TVRDVCFI-EDTSNKSSLLISGGAGDC----KIYVTDCATG-QAFQ-ALSGHSGHVLSL-YNWGGATVLSGSHD-----R 71 (93)
Q Consensus 5 ~v~~~~~~-~~~~~~~~~~~~~g~~~~----~v~~~~~~~~-~~~~-~~~~~~~~v~~~-~~~~~~~~~s~~~~-----~ 71 (93)
.+....|+ |+ +++++-+.+.+| .|.++|+.++ +.+. .+. .....+ |+++++.++....+ .
T Consensus 175 ~~~~~~~S~PD----G~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~ 247 (751)
T 2xe4_A 175 DVMEVKPAPPE----HDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLREN 247 (751)
T ss_dssp EEEEEEECTTT----TCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEE
T ss_pred EEeeeEecCCC----CCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCC
Confidence 56778999 98 666654433333 4999999988 5321 111 112345 89998877655443 3
Q ss_pred cEEEEeCCCCc
Q psy14456 72 TVRFWDLRTRG 82 (93)
Q Consensus 72 ~i~~~d~~~~~ 82 (93)
.|..+++.+++
T Consensus 248 ~v~~~~lgt~~ 258 (751)
T 2xe4_A 248 KVWRHVMGKLQ 258 (751)
T ss_dssp EEEEEETTSCG
T ss_pred EEEEEECCCCc
Confidence 57777887654
No 246
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=94.26 E-value=0.3 Score=30.76 Aligned_cols=59 Identities=17% Similarity=0.002 Sum_probs=41.7
Q ss_pred CCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEec
Q psy14456 29 DCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 29 ~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~ 88 (93)
.+.+..||+.+++.+-..... .....- ....+.+++.++.|+.++.+|.++|+.+..+.
T Consensus 452 ~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~ 511 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEKMER-FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFK 511 (599)
T ss_dssp CEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cCeEEEEECCCCCEEeEecCC-CCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEee
Confidence 478999999999876555311 111111 23356677778999999999999999887774
No 247
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=93.98 E-value=0.22 Score=33.05 Aligned_cols=37 Identities=19% Similarity=0.311 Sum_probs=30.6
Q ss_pred ceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEec
Q psy14456 52 HVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 52 ~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~ 88 (93)
.+.++ ..++..++++.+.|+.+++|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 45566 66677889999999999999999999887753
No 248
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=93.92 E-value=0.61 Score=28.52 Aligned_cols=35 Identities=17% Similarity=0.266 Sum_probs=26.0
Q ss_pred ccceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC
Q psy14456 3 DGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT 39 (93)
Q Consensus 3 ~~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 39 (93)
..+|..+.|+|-+.++..+++. - .|+.|++||+..
T Consensus 124 ~s~I~qVlWHPl~~~ds~LVVL-t-sD~~Ir~yDl~~ 158 (452)
T 3pbp_A 124 KSSIKKVLFHPKSYRDSCIVVL-K-EDDTITMFDILN 158 (452)
T ss_dssp CCCEEEEEECTTBGGGCEEEEE-E-TTSCEEEEETTC
T ss_pred CCceeEEEeccccCCCCeEEEE-e-cCCEEEEEEccc
Confidence 3679999999986554444444 3 499999999875
No 249
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=93.87 E-value=0.44 Score=26.64 Aligned_cols=78 Identities=13% Similarity=0.045 Sum_probs=51.1
Q ss_pred eeEEEEEecCCCCcceEEEeeeC-CCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEE-EEecCCCcEEEEeCCCCc
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAG-DCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATV-LSGSHDRTVRFWDLRTRG 82 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~-~s~~~~~~i~~~d~~~~~ 82 (93)
.-.+.|++ +.++.+.|.. +..|+.+|+.+++.+....-.... ... ....+..+ ...-.++.+.++|..+.+
T Consensus 23 tqGL~~~~-----~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~-fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~ 96 (243)
T 3mbr_X 23 TEGLFYLR-----GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPY-FGAGIVAWRDRLIQLTWRNHEGFVYDLATLT 96 (243)
T ss_dssp EEEEEEET-----TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTC-CEEEEEEETTEEEEEESSSSEEEEEETTTTE
T ss_pred cccEEEEC-----CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCc-ceeEEEEeCCEEEEEEeeCCEEEEEECCcCc
Confidence 44667764 4667777731 258999999999988776532221 222 23333444 444468899999999998
Q ss_pred eeeEecC
Q psy14456 83 CTNVLTP 89 (93)
Q Consensus 83 ~~~~~~~ 89 (93)
.+..|..
T Consensus 97 ~~~ti~~ 103 (243)
T 3mbr_X 97 PRARFRY 103 (243)
T ss_dssp EEEEEEC
T ss_pred EEEEEeC
Confidence 8888763
No 250
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=93.75 E-value=0.53 Score=27.15 Aligned_cols=66 Identities=6% Similarity=-0.002 Sum_probs=41.7
Q ss_pred eEEEeeeCCCeEEEEeCCCCceeEEeecccc-ceEEEEecCCCEEEEecCCCcEEEEeCCCCceeeEec
Q psy14456 21 LLISGGAGDCKIYVTDCATGQAFQALSGHSG-HVLSLYNWGGATVLSGSHDRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 21 ~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~ 88 (93)
.++.+. .++.+..+|..+++.+........ ....... .+..+..++.++.+.++|.++++.+..+.
T Consensus 279 ~l~~~~-~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~-~~~~l~v~~~~g~l~~~d~~tG~~~~~~~ 345 (376)
T 3q7m_A 279 RIYLVD-QNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL-YNGNLVVGDSEGYLHWINVEDGRFVAQQK 345 (376)
T ss_dssp EEEEEE-TTCCEEEEETTTCCEEEEECTTTTSCCCCCEE-ETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEEc-CCCeEEEEECCCCcEEEeecccCCCcccCCEE-ECCEEEEEeCCCeEEEEECCCCcEEEEEe
Confidence 344443 478888888888877655442111 1111111 24567777888999999999998766554
No 251
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.64 E-value=0.23 Score=31.51 Aligned_cols=70 Identities=11% Similarity=0.081 Sum_probs=48.5
Q ss_pred eEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC------c------e-eEEeeccccceEEEEecCCCEEEEecCCCcE
Q psy14456 7 RDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG------Q------A-FQALSGHSGHVLSLYNWGGATVLSGSHDRTV 73 (93)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~------~------~-~~~~~~~~~~v~~~~~~~~~~~~s~~~~~~i 73 (93)
-.+..+|+ +++++.+|..+.++.+++.+.. + . ......-.++....|.++|....|.-.|+++
T Consensus 326 HGv~vsPD----Gkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqv 401 (638)
T 3sbq_A 326 HGCNTSSD----GKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQV 401 (638)
T ss_dssp CCEEECTT----SCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEE
T ss_pred cceeeCCC----CCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceE
Confidence 35677788 7888888877999999998732 1 1 2222222334333389989767777799999
Q ss_pred EEEeCCC
Q psy14456 74 RFWDLRT 80 (93)
Q Consensus 74 ~~~d~~~ 80 (93)
..|++..
T Consensus 402 vkWni~~ 408 (638)
T 3sbq_A 402 VKWNMEE 408 (638)
T ss_dssp EEEEHHH
T ss_pred EEEeccH
Confidence 9999875
No 252
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=93.58 E-value=0.47 Score=26.05 Aligned_cols=78 Identities=18% Similarity=0.091 Sum_probs=49.1
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCcee
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCT 84 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~ 84 (93)
...++++++ +..++.+....+.|..++.........+.. ......+ .. .+.++++...++.|..+|..+++.+
T Consensus 169 P~gia~d~~----~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 169 PNGLTFDAF----SSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEM 242 (267)
T ss_dssp EEEEEEETT----TTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEE
T ss_pred CcEEEEcCC----CCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCce
Confidence 467788886 445544444578899999875433332222 2223455 44 4455555556789999999988887
Q ss_pred eEecC
Q psy14456 85 NVLTP 89 (93)
Q Consensus 85 ~~~~~ 89 (93)
..+..
T Consensus 243 ~~i~~ 247 (267)
T 1npe_A 243 DTFHP 247 (267)
T ss_dssp EEECC
T ss_pred EEEcc
Confidence 77753
No 253
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=93.05 E-value=0.71 Score=26.61 Aligned_cols=68 Identities=10% Similarity=0.049 Sum_probs=44.0
Q ss_pred ceEEEeeeCCCeEEEEeCCCCceeEEeecc---------ccceEEEEecCCCEEEEecCCCcEEEEeCCCCceeeEec
Q psy14456 20 SLLISGGAGDCKIYVTDCATGQAFQALSGH---------SGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 20 ~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~ 88 (93)
..++... .++.+..+|.++++.+-..... ...+.......+..+..++.++.+..+|..+|+.+..+.
T Consensus 54 ~~v~~~~-~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 54 NVVYAAD-RAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp TEEEEEC-TTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CEEEEEc-CCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 3445544 4889999999999876554431 122222222245566677788999999999988765543
No 254
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=92.90 E-value=0.62 Score=25.55 Aligned_cols=71 Identities=8% Similarity=0.052 Sum_probs=44.8
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCC-CEEEEecCCCcEEEEeCCC
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGG-ATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~-~~~~s~~~~~~i~~~d~~~ 80 (93)
...++|+++ +..++.+...++.|..++.+.................+ +++++ .++++-...+.|.++++..
T Consensus 38 ~~gi~~d~~----~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g 110 (267)
T 1npe_A 38 IIGLAFDCV----DKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG 110 (267)
T ss_dssp EEEEEEETT----TTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEEEEecC----CCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCC
Confidence 457888876 34444444458899999987654433332222455677 88854 4455555677888888764
No 255
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=92.54 E-value=0.54 Score=31.27 Aligned_cols=37 Identities=24% Similarity=0.345 Sum_probs=27.4
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEe
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQAL 46 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~ 46 (93)
.+.++...++ ..++++.+ +|+.+|+|++.+++++...
T Consensus 237 ~~~~~~~~~~----~~~lftl~-~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLST----YNVLVMLS-LDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETT----TTEEEEEE-TTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCC----CcEEEEEE-CCCEEEEEECCCCCeEeee
Confidence 3555666655 56777776 7999999999999876544
No 256
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=92.34 E-value=0.23 Score=33.54 Aligned_cols=32 Identities=19% Similarity=0.250 Sum_probs=27.4
Q ss_pred EecCCCEEEEecCCCcEEEEeCCCCceeeEec
Q psy14456 57 YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 57 ~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~ 88 (93)
...+...+++-+.|+.+++|++.+++++.+..
T Consensus 245 ~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 245 FLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp EETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred ccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 45567888999999999999999999887754
No 257
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=92.10 E-value=1.5 Score=28.00 Aligned_cols=58 Identities=12% Similarity=0.058 Sum_probs=41.4
Q ss_pred eEEEEeCCCCceeEEeec--cc-------cceEEE-EecCC---CEEEEecCCCcEEEEeCCCCceeeEec
Q psy14456 31 KIYVTDCATGQAFQALSG--HS-------GHVLSL-YNWGG---ATVLSGSHDRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 31 ~v~~~~~~~~~~~~~~~~--~~-------~~v~~~-~~~~~---~~~~s~~~~~~i~~~d~~~~~~~~~~~ 88 (93)
.|..+|.++++.+-.++. |. ...... ...++ ..++.++.++.+.++|.++|+.+..+.
T Consensus 284 sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~ 354 (677)
T 1kb0_A 284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKN 354 (677)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEecccc
Confidence 589999999988766542 21 112222 33466 678889999999999999998876654
No 258
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=91.44 E-value=1.3 Score=26.02 Aligned_cols=77 Identities=10% Similarity=0.076 Sum_probs=48.1
Q ss_pred eEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeecc-----cc--ceEEE-E---ecCCCEEEEec-------
Q psy14456 7 RDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGH-----SG--HVLSL-Y---NWGGATVLSGS------- 68 (93)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~-----~~--~v~~~-~---~~~~~~~~s~~------- 68 (93)
.+.+|++. ...+..+....+.|..|+...+......... .. ....+ + .+++.+++...
T Consensus 16 E~~~wd~~----~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 16 EDTIYDRT----RQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp SCEEEETT----TTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred cCccCcCC----CCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 46788775 3455555546999999998765443322221 11 34677 8 57777776533
Q ss_pred ------CCCcEEEEeCC---CCceeeEe
Q psy14456 69 ------HDRTVRFWDLR---TRGCTNVL 87 (93)
Q Consensus 69 ------~~~~i~~~d~~---~~~~~~~~ 87 (93)
.+..+..+|+. +++.+...
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~ 119 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSV 119 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEE
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEe
Confidence 26789999998 66655433
No 259
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=90.73 E-value=2.1 Score=27.23 Aligned_cols=57 Identities=11% Similarity=0.039 Sum_probs=39.8
Q ss_pred eEEEEeCCCCceeEEeec--cc-------cceEEE-EecCCC---EEEEecCCCcEEEEeCCCCceeeEe
Q psy14456 31 KIYVTDCATGQAFQALSG--HS-------GHVLSL-YNWGGA---TVLSGSHDRTVRFWDLRTRGCTNVL 87 (93)
Q Consensus 31 ~v~~~~~~~~~~~~~~~~--~~-------~~v~~~-~~~~~~---~~~s~~~~~~i~~~d~~~~~~~~~~ 87 (93)
.|..+|.++++.+-.++. |. .+.... +..++. .++.++.++.+.++|.++|+.+..+
T Consensus 271 ~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~ 340 (668)
T 1kv9_A 271 SILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAE 340 (668)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred eEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccc
Confidence 489999999998766643 21 222222 333554 5788889999999999999877443
No 260
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=90.41 E-value=1.8 Score=25.93 Aligned_cols=69 Identities=10% Similarity=0.096 Sum_probs=42.4
Q ss_pred eEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEee-ccccceEEE-EecCCC-EEEEecCCCcEEEEeCC
Q psy14456 7 RDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALS-GHSGHVLSL-YNWGGA-TVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~-~~~~~v~~~-~~~~~~-~~~s~~~~~~i~~~d~~ 79 (93)
..++++|+. +..+++- ..++.|..++...+....... +.......+ |++++. ++++-...+.|..++..
T Consensus 229 ~giavdp~~---g~lyv~d-~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 229 NGAETHPIN---GELYFNS-WNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp CCEEECTTT---CCEEEEE-TTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred eEEEEeCCC---CEEEEEE-CCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 456677731 4544443 357888888887665422221 122345678 999998 45555677888887765
No 261
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=90.37 E-value=1.4 Score=24.59 Aligned_cols=55 Identities=9% Similarity=0.023 Sum_probs=34.2
Q ss_pred CCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEe
Q psy14456 28 GDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVL 87 (93)
Q Consensus 28 ~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~ 87 (93)
.++.+..++.. +..+..+......+..+ ...++.+++.. +.+..+| .++.....+
T Consensus 155 ~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~ 210 (330)
T 3hxj_A 155 NDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNF 210 (330)
T ss_dssp TTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEE
T ss_pred CCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEE
Confidence 47888888887 76655554434444455 55666655544 7778888 566554443
No 262
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=90.18 E-value=1.1 Score=29.14 Aligned_cols=35 Identities=9% Similarity=0.170 Sum_probs=27.9
Q ss_pred eEEEEecCCCEEEEecCCCcEEEEeCCCCceeeEec
Q psy14456 53 VLSLYNWGGATVLSGSHDRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 53 v~~~~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~~ 88 (93)
|.++ ..+..++++-+.|+.+++|++++++++....
T Consensus 224 Is~~-~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 224 ISCK-LFHERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEE-EETTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEe-ccCCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 4444 3357799999999999999999999877654
No 263
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=90.06 E-value=0.64 Score=31.48 Aligned_cols=27 Identities=26% Similarity=0.297 Sum_probs=21.2
Q ss_pred cceEEEeeeCCCeEEEEeCCCCceeEEe
Q psy14456 19 SSLLISGGAGDCKIYVTDCATGQAFQAL 46 (93)
Q Consensus 19 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~ 46 (93)
..++++-+ +|+.+++|++.+++++...
T Consensus 249 ~~~lftL~-~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 249 YNVLVMLS-LDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp TTEEEEEB-TTCEEEEEETTTTEEEEEE
T ss_pred ccEEEEEe-CCCEEEEEECCCCCeEEee
Confidence 46677776 7999999999988776543
No 264
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=89.02 E-value=3.2 Score=26.78 Aligned_cols=71 Identities=15% Similarity=0.101 Sum_probs=41.6
Q ss_pred eEEEEEecCCCCcceEEEeeeCC----CeEEEEeCCCCce--eEEee-ccccceEEE-EecCCCEEEEec---CCCcEEE
Q psy14456 7 RDVCFIEDTSNKSSLLISGGAGD----CKIYVTDCATGQA--FQALS-GHSGHVLSL-YNWGGATVLSGS---HDRTVRF 75 (93)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~g~~~----~~v~~~~~~~~~~--~~~~~-~~~~~v~~~-~~~~~~~~~s~~---~~~~i~~ 75 (93)
..+.|+|+ ++.++.+.... ..|..+++.++.. ...+. ........+ |+++++.|+... ....+.+
T Consensus 224 ~~~~WspD----g~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~ 299 (751)
T 2xe4_A 224 GEIVWGPD----HTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHL 299 (751)
T ss_dssp SCCEECSS----TTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEE
T ss_pred eeEEEecC----CCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEE
Confidence 46789998 55555443211 3577777776542 22222 222334566 999998776443 3356777
Q ss_pred EeCCCC
Q psy14456 76 WDLRTR 81 (93)
Q Consensus 76 ~d~~~~ 81 (93)
+|+.++
T Consensus 300 ~d~~~~ 305 (751)
T 2xe4_A 300 LDLRKG 305 (751)
T ss_dssp EESSSC
T ss_pred EECCCC
Confidence 888765
No 265
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=88.18 E-value=1.8 Score=24.22 Aligned_cols=65 Identities=12% Similarity=0.055 Sum_probs=40.2
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCce------eEEee--ccccceEEE-EecCCCEEEEecCCCcEEE
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQA------FQALS--GHSGHVLSL-YNWGGATVLSGSHDRTVRF 75 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~------~~~~~--~~~~~v~~~-~~~~~~~~~s~~~~~~i~~ 75 (93)
.+.+++|+|+ +.+.+. + ++.+.-.+..+... -..+- +-+ ...++ |.+++.+.++ .|+.|.-
T Consensus 42 ~~~~laf~P~----G~LYaV--~-~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr 111 (236)
T 1tl2_A 42 NFKFLFLSPG----GELYGV--L-NDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYK 111 (236)
T ss_dssp TCSEEEECTT----SCEEEE--E-TTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEE
T ss_pred cceeEEECCC----ccEEEE--e-CCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe--CCCEEEE
Confidence 4678999997 665554 3 78777666544211 11110 111 24677 8999988877 5688877
Q ss_pred EeCC
Q psy14456 76 WDLR 79 (93)
Q Consensus 76 ~d~~ 79 (93)
++-.
T Consensus 112 ~~pP 115 (236)
T 1tl2_A 112 ASPP 115 (236)
T ss_dssp ESCC
T ss_pred eCCC
Confidence 7653
No 266
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=87.67 E-value=2.9 Score=24.62 Aligned_cols=77 Identities=8% Similarity=-0.027 Sum_probs=45.2
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCcee
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCT 84 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~ 84 (93)
-..++++|+ +..++.+....+.|..++++.......+.........+ +. .+.++.+-...+.|..++..++...
T Consensus 248 PnGlavd~~----~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~ 322 (386)
T 3v65_B 248 PNGLTIDYA----GRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQ 322 (386)
T ss_dssp EEEEEEEGG----GTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSC
T ss_pred eeeEEEeCC----CCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE-CCEEEEeeCCCCeEEEEECCCCcce
Confidence 467888876 44454445467888888876433322222223344556 53 4455566667778888886666544
Q ss_pred eEe
Q psy14456 85 NVL 87 (93)
Q Consensus 85 ~~~ 87 (93)
..+
T Consensus 323 ~~i 325 (386)
T 3v65_B 323 EII 325 (386)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 267
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=87.14 E-value=2.7 Score=23.65 Aligned_cols=72 Identities=13% Similarity=0.085 Sum_probs=44.2
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCC--CcEEEEeCCCC
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHD--RTVRFWDLRTR 81 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~--~~i~~~d~~~~ 81 (93)
....++|+++ +..+++.. .++.|..++.+.. ....+. -......+ +.++++++++.... ..+..+|..++
T Consensus 33 ~pegia~~~~----g~lyv~d~-~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g 105 (306)
T 2p4o_A 33 FLENLASAPD----GTIFVTNH-EVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDG 105 (306)
T ss_dssp CEEEEEECTT----SCEEEEET-TTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTS
T ss_pred CcceEEECCC----CCEEEEeC-CCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCC
Confidence 3567788876 56555543 5888988887643 222222 23456778 88888876655332 24666776666
Q ss_pred ce
Q psy14456 82 GC 83 (93)
Q Consensus 82 ~~ 83 (93)
..
T Consensus 106 ~~ 107 (306)
T 2p4o_A 106 TV 107 (306)
T ss_dssp CE
T ss_pred eE
Confidence 54
No 268
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=86.23 E-value=4.7 Score=25.53 Aligned_cols=65 Identities=14% Similarity=0.187 Sum_probs=40.7
Q ss_pred cceEEEeeeCCCeEEEEeCCCCceeE--EeeccccceEEE-EecCCCEEEEec-CC-----CcEEEEeCCCCcee
Q psy14456 19 SSLLISGGAGDCKIYVTDCATGQAFQ--ALSGHSGHVLSL-YNWGGATVLSGS-HD-----RTVRFWDLRTRGCT 84 (93)
Q Consensus 19 ~~~~~~~g~~~~~v~~~~~~~~~~~~--~~~~~~~~v~~~-~~~~~~~~~s~~-~~-----~~i~~~d~~~~~~~ 84 (93)
+..++.+|..+..+.+||..+..-.. .+...... ... ..+++..++.|+ .+ ..+.+||..++...
T Consensus 254 g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~-~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~ 327 (656)
T 1k3i_A 254 GQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGY-QSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWT 327 (656)
T ss_dssp SCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSS-CEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEE
T ss_pred CCEEEeCCCCCCceEEecCcCCceeECCCCCccccc-cceEEecCCeEEEEeCcccCCcccccceEeCCCCCcce
Confidence 67777877556789999987664322 12111111 223 455788888877 34 56899999876543
No 269
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=85.94 E-value=4.8 Score=25.45 Aligned_cols=65 Identities=14% Similarity=0.168 Sum_probs=39.4
Q ss_pred cceEEEeeeCC----------CeEEEEeCCCCce--eEEeec-cccceEEE-EecCCCEEEEec-CCCcEEEEeCCCCce
Q psy14456 19 SSLLISGGAGD----------CKIYVTDCATGQA--FQALSG-HSGHVLSL-YNWGGATVLSGS-HDRTVRFWDLRTRGC 83 (93)
Q Consensus 19 ~~~~~~~g~~~----------~~v~~~~~~~~~~--~~~~~~-~~~~v~~~-~~~~~~~~~s~~-~~~~i~~~d~~~~~~ 83 (93)
++.++.+|... ..+.+||..+++. +..+.. +....... +..++.+++.|+ .+..+.+||..+...
T Consensus 198 g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W 277 (656)
T 1k3i_A 198 GRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSW 277 (656)
T ss_dssp TEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEE
T ss_pred CEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCce
Confidence 56666665311 1578899877643 222322 22222234 567888888887 456899999887653
No 270
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=85.71 E-value=4.8 Score=25.20 Aligned_cols=67 Identities=12% Similarity=0.084 Sum_probs=41.0
Q ss_pred eEEEeeeCCCeEEEEeCCCCceeEEeeccc--c--ceEEE-EecCCCEEEEecC-----CCcEEEEeCCCCceeeEec
Q psy14456 21 LLISGGAGDCKIYVTDCATGQAFQALSGHS--G--HVLSL-YNWGGATVLSGSH-----DRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 21 ~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~--~--~v~~~-~~~~~~~~~s~~~-----~~~i~~~d~~~~~~~~~~~ 88 (93)
.++... .++.+..+|..+++.+-...... . .+..- .-.++..++.... ++.+..+|.++|+.+-.+.
T Consensus 117 ~v~v~~-~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 117 QIVKKQ-ANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp EEEEEC-TTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred EEEEEe-CCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 444444 48999999999998876543211 0 12111 1124444433332 7899999999998876664
No 271
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=85.67 E-value=3.1 Score=27.19 Aligned_cols=27 Identities=19% Similarity=0.217 Sum_probs=21.5
Q ss_pred cceEEEeeeCCCeEEEEeCCCCceeEEe
Q psy14456 19 SSLLISGGAGDCKIYVTDCATGQAFQAL 46 (93)
Q Consensus 19 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~ 46 (93)
..++++-+ +|..+|+|++.+++++...
T Consensus 231 ~~fLftL~-~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 231 ERYLIVLT-QNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp TTEEEEEE-TTCEEEEEETTTTEEEEEE
T ss_pred CcEEEEEE-cCCeEEEEEcCCCceEEee
Confidence 45677766 7999999999999876554
No 272
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=85.01 E-value=3.6 Score=23.20 Aligned_cols=75 Identities=16% Similarity=0.003 Sum_probs=42.4
Q ss_pred eEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCc--eeEEeeccccceEEE-EecCCCEEEEecC----------CCcE
Q psy14456 7 RDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQ--AFQALSGHSGHVLSL-YNWGGATVLSGSH----------DRTV 73 (93)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~--~~~~~~~~~~~v~~~-~~~~~~~~~s~~~----------~~~i 73 (93)
..++++|+ ++.++.+....+.|..+++.... ....+....+ ...+ +.+++.++++... .+.+
T Consensus 188 ~gia~~~d----g~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v 262 (322)
T 2fp8_A 188 GGAEVSAD----SSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKG 262 (322)
T ss_dssp CEEEECTT----SSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEE
T ss_pred cceEECCC----CCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEE
Confidence 45677777 55444443347889988876421 1111211122 5567 8888887766543 3557
Q ss_pred EEEeCCCCceeeEe
Q psy14456 74 RFWDLRTRGCTNVL 87 (93)
Q Consensus 74 ~~~d~~~~~~~~~~ 87 (93)
..+|.. ++.+..+
T Consensus 263 ~~~d~~-G~~~~~~ 275 (322)
T 2fp8_A 263 IKFDEF-GNILEVI 275 (322)
T ss_dssp EEECTT-SCEEEEE
T ss_pred EEECCC-CCEEEEE
Confidence 777763 5554444
No 273
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=84.00 E-value=6.5 Score=25.33 Aligned_cols=76 Identities=16% Similarity=-0.005 Sum_probs=42.1
Q ss_pred eEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEee--ccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCce
Q psy14456 7 RDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALS--GHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGC 83 (93)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~--~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~ 83 (93)
..++|+|+ +..|+.+....+.|..++++.......+. ........+ +..+ .++.+-...+.|..++..++..
T Consensus 543 nGlavd~~----~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~ 617 (699)
T 1n7d_A 543 NGITLDLL----SGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSD 617 (699)
T ss_dssp CCEEECTT----TCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEE
T ss_pred cEEEEecc----CCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCc
Confidence 46788876 34444444457888888876433222221 111222333 4333 4455556678888888877766
Q ss_pred eeEe
Q psy14456 84 TNVL 87 (93)
Q Consensus 84 ~~~~ 87 (93)
+..+
T Consensus 618 ~~~i 621 (699)
T 1n7d_A 618 VNLL 621 (699)
T ss_dssp EECC
T ss_pred eEEe
Confidence 5555
No 274
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=82.03 E-value=5.9 Score=23.34 Aligned_cols=73 Identities=11% Similarity=0.059 Sum_probs=41.0
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecC-CCEEEEecCCCcEEEEeCCCC
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG-GATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~-~~~~~s~~~~~~i~~~d~~~~ 81 (93)
....++|.+. ...++-+....+.|..++++.......+.........+ +.+. +.+..+-...+.|.+.++...
T Consensus 117 ~~~gl~~d~~----~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~ 191 (386)
T 3v65_B 117 NAIALDFHHR----RELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA 191 (386)
T ss_dssp CEEEEEEETT----TTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSC
T ss_pred ccEEEEEecC----CCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCC
Confidence 4567888875 34444444457888888877654333222222233455 6764 444455556667777776543
No 275
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=81.49 E-value=5.1 Score=22.30 Aligned_cols=57 Identities=12% Similarity=0.057 Sum_probs=37.0
Q ss_pred CCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCceeeEe
Q psy14456 28 GDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVL 87 (93)
Q Consensus 28 ~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~~~~ 87 (93)
.++.+..+|.. +............+..+ ..+++.+ ..++.++.+..+|.. +.....+
T Consensus 115 ~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l-~vgt~~~~l~~~d~~-g~~~~~~ 172 (330)
T 3hxj_A 115 MDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTI-YVGSNDNYLYAINPD-GTEKWRF 172 (330)
T ss_dssp TTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCE-EEECTTSEEEEECTT-SCEEEEE
T ss_pred cCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEE-EEEcCCCEEEEECCC-CCEeEEE
Confidence 47889999987 76655554444444444 5556664 445667889999988 6654444
No 276
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=80.10 E-value=8.5 Score=23.97 Aligned_cols=68 Identities=10% Similarity=0.128 Sum_probs=39.9
Q ss_pred eEEEEEecCCCCcceEEEeeeCCCeEEEEeCC-------CCce-----------eEEe-e-ccccceEEE-EecCCCE-E
Q psy14456 7 RDVCFIEDTSNKSSLLISGGAGDCKIYVTDCA-------TGQA-----------FQAL-S-GHSGHVLSL-YNWGGAT-V 64 (93)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-------~~~~-----------~~~~-~-~~~~~v~~~-~~~~~~~-~ 64 (93)
..++.+|++ +.++++- ..++.|..+|+. ++.. ...+ . +.......+ |++++.. .
T Consensus 250 ~giavdp~~---g~LYvtd-~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lY 325 (496)
T 3kya_A 250 NGATIHPIN---GELYFNS-YEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAY 325 (496)
T ss_dssp CCEEECTTT---CCEEEEE-TTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEE
T ss_pred eEEEEcCCC---CeEEEEE-CCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEE
Confidence 345566642 3444444 468889999886 4433 1122 1 223344678 9999984 4
Q ss_pred EEecCCCcEEEEeC
Q psy14456 65 LSGSHDRTVRFWDL 78 (93)
Q Consensus 65 ~s~~~~~~i~~~d~ 78 (93)
++=...+.|+.++.
T Consensus 326 vaD~~~h~I~kid~ 339 (496)
T 3kya_A 326 FGVINNHYFMRSDY 339 (496)
T ss_dssp EEETTTTEEEEEEE
T ss_pred EEeCCCCEEEEEec
Confidence 45556778888554
No 277
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=79.42 E-value=7.1 Score=22.65 Aligned_cols=77 Identities=8% Similarity=-0.027 Sum_probs=44.0
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCcee
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCT 84 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~ 84 (93)
-..++++|+ ...++.+....+.|..++++.......+.........+ +. .+.++.+-...+.|...+..++...
T Consensus 205 PnGla~d~~----~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~ 279 (349)
T 3v64_C 205 PNGLTIDYA----GRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQ 279 (349)
T ss_dssp EEEEEEETT----TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSC
T ss_pred cceEEEeCC----CCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCcc
Confidence 467888876 34444444457888888876433222222223344556 53 4455556556777877775555544
Q ss_pred eEe
Q psy14456 85 NVL 87 (93)
Q Consensus 85 ~~~ 87 (93)
..+
T Consensus 280 ~~i 282 (349)
T 3v64_C 280 EII 282 (349)
T ss_dssp EEE
T ss_pred EEe
Confidence 443
No 278
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=79.26 E-value=6.9 Score=22.45 Aligned_cols=77 Identities=9% Similarity=-0.059 Sum_probs=44.3
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCcee
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCT 84 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~ 84 (93)
-..++++++ +..++-+....+.|..++++.........+.......+ +.. +.++.+-...+.|..++..+++..
T Consensus 168 Pnglavd~~----~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~~ 242 (318)
T 3sov_A 168 PNGLTLDYE----EQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGEGL 242 (318)
T ss_dssp EEEEEEETT----TTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSC
T ss_pred ccEEEEecc----CCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCce
Confidence 356788876 34444445467888888876433222222223344555 543 344555556778888888777654
Q ss_pred eEe
Q psy14456 85 NVL 87 (93)
Q Consensus 85 ~~~ 87 (93)
+.+
T Consensus 243 ~~i 245 (318)
T 3sov_A 243 REI 245 (318)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 279
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=78.58 E-value=7.6 Score=22.52 Aligned_cols=73 Identities=11% Similarity=0.067 Sum_probs=42.4
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-Eec-CCCEEEEecCCCcEEEEeCCCC
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d~~~~ 81 (93)
....++|++. ...++-+....+.|..++++.......+.........+ +.+ .+.+..+-...+.|.+.++...
T Consensus 74 ~~~~l~~d~~----~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~ 148 (349)
T 3v64_C 74 NAIALDFHHR----RELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA 148 (349)
T ss_dssp CEEEEEEETT----TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred ceEEEEEecc----ccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCC
Confidence 3567788876 34444444457888888877554333222222333566 776 4445556556678888877643
No 280
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=76.19 E-value=13 Score=23.88 Aligned_cols=70 Identities=9% Similarity=0.001 Sum_probs=46.9
Q ss_pred cceEEEeeeCCCeEEEEeCCCCceeEEeecc-ccceEEE-E-e-cCCCEEEEec------------------CCCcEEEE
Q psy14456 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGH-SGHVLSL-Y-N-WGGATVLSGS------------------HDRTVRFW 76 (93)
Q Consensus 19 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~-~~~v~~~-~-~-~~~~~~~s~~------------------~~~~i~~~ 76 (93)
+++++.....+..|.+.|+++.++...+.-- ......+ + . |++.+++..+ .++.+.+.
T Consensus 101 G~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvI 180 (595)
T 1fwx_A 101 GRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAV 180 (595)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEE
T ss_pred CCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEE
Confidence 5666666656888999999999887744321 1234455 4 4 7777776663 23578899
Q ss_pred eCCCCceeeEec
Q psy14456 77 DLRTRGCTNVLT 88 (93)
Q Consensus 77 d~~~~~~~~~~~ 88 (93)
|..+.+....+.
T Consensus 181 D~~t~~v~~qI~ 192 (595)
T 1fwx_A 181 DADKWEVAWQVL 192 (595)
T ss_dssp ETTTTEEEEEEE
T ss_pred ECCCCeEEEEEE
Confidence 999877665553
No 281
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=75.14 E-value=11 Score=22.69 Aligned_cols=69 Identities=12% Similarity=0.084 Sum_probs=41.2
Q ss_pred eEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEe-e-ccccceEEE-EecCCC-EEEEecCCCcEEEEeCC
Q psy14456 7 RDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQAL-S-GHSGHVLSL-YNWGGA-TVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~-~-~~~~~v~~~-~~~~~~-~~~s~~~~~~i~~~d~~ 79 (93)
..++++|.. +.++++.. .++.|..++..++.....+ . +.......+ +++++. ++++-...+.|..+++.
T Consensus 231 ~giavd~~~---G~lyv~d~-~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 231 KTCAVHPQN---GKIYYTRY-HHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp CCCEECTTT---CCEEECBT-TCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred CEEEEeCCC---CeEEEEEC-CCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 345666631 45554543 4788888888766652222 1 112222357 899888 55555667888887765
No 282
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=75.12 E-value=7.8 Score=24.99 Aligned_cols=73 Identities=15% Similarity=0.006 Sum_probs=36.6
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC----CceeEEeeccccceEEE-Eec-CCCEEEEecCCCcEEEEeC
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT----GQAFQALSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~----~~~~~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d~ 78 (93)
.+..++|.+. ...|+.+....+.|..+++.. ......+.........+ +.+ .+.++++-...+.|.+.++
T Consensus 407 ~p~gla~d~~----~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~ 482 (699)
T 1n7d_A 407 NVVALDTEVA----SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 482 (699)
T ss_dssp TCCCCEEETT----TTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBS
T ss_pred ceEEEccccc----cCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEec
Confidence 3456778775 444554444567888887764 11111111111122334 453 3444444445667777776
Q ss_pred CCC
Q psy14456 79 RTR 81 (93)
Q Consensus 79 ~~~ 81 (93)
...
T Consensus 483 dg~ 485 (699)
T 1n7d_A 483 KGV 485 (699)
T ss_dssp SSC
T ss_pred CCC
Confidence 543
No 283
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=73.38 E-value=12 Score=22.17 Aligned_cols=58 Identities=12% Similarity=0.028 Sum_probs=36.6
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC-Cce--eEEeeccccceEEE-Eec-CCCEEEEec
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT-GQA--FQALSGHSGHVLSL-YNW-GGATVLSGS 68 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~--~~~~~~~~~~v~~~-~~~-~~~~~~s~~ 68 (93)
-+.++|+|+ ++.++.+.+..+.|..|+++. +.. ...+ .-....-.+ ... +|++.+++.
T Consensus 223 pNGia~spD----g~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 223 ANGINISPD----GKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp EEEEEECTT----SSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEE
T ss_pred cCcceECCC----CCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEec
Confidence 467899999 666665555688999998763 322 1223 123344456 787 488877654
No 284
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=70.15 E-value=7.7 Score=20.93 Aligned_cols=33 Identities=9% Similarity=0.119 Sum_probs=22.7
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCc
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQ 41 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 41 (93)
.+..+.|..++ ..-++++++ ++.+.++|.+-|+
T Consensus 120 hllsl~f~~g~---aHaia~S~~-g~~~tlFDPN~GE 152 (188)
T 1ukf_A 120 HLLSLRFANVQ---GHAIACSCE-GSQFKLFDPNLGE 152 (188)
T ss_dssp EEEEEEETTTE---EEEEEEEEE-TTEEEEEETTTEE
T ss_pred eEEEEEecCCC---ceeEEeccC-CCeEEEeCCCCce
Confidence 34556665442 556777664 9999999998764
No 285
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=69.44 E-value=15 Score=21.79 Aligned_cols=75 Identities=15% Similarity=-0.003 Sum_probs=41.1
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC----ceeEEeeccccceEEE-Eec-CCCEEEEecCCCcEEEEe
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG----QAFQALSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~----~~~~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d 77 (93)
..+..++|++. ...++-+....+.|..++++.. .....+.........+ +.+ .+.+..+-...+.|.+.+
T Consensus 112 ~~~~~l~~d~~----~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~ 187 (400)
T 3p5b_L 112 RNVVALDTEVA----SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVAD 187 (400)
T ss_dssp SCEEEEEEETT----TTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEC
T ss_pred CcceEEeeeec----cCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEe
Confidence 35677888876 3444444445778887777642 1222222223344566 776 444555555667788887
Q ss_pred CCCCc
Q psy14456 78 LRTRG 82 (93)
Q Consensus 78 ~~~~~ 82 (93)
+....
T Consensus 188 ~~g~~ 192 (400)
T 3p5b_L 188 TKGVK 192 (400)
T ss_dssp TTTCS
T ss_pred CCCCc
Confidence 76443
No 286
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=69.32 E-value=13 Score=21.09 Aligned_cols=73 Identities=15% Similarity=0.054 Sum_probs=40.3
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCC---CceeEE-eeccccceEEE-Eec-CCCEEEEecCCCcEEEEeC
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT---GQAFQA-LSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~---~~~~~~-~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d~ 78 (93)
....++|++. ...++-+...++.|..++++. +..... +...-.....+ +.+ .+.+..+-...+.|.+.+.
T Consensus 31 ~p~g~~~d~~----~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~ 106 (316)
T 1ijq_A 31 NVVALDTEVA----SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 106 (316)
T ss_dssp SEEEEEEETT----TTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ceEEEEEEeC----CCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeC
Confidence 3567888876 344444444578888888765 122222 22222334566 776 4445555566778888887
Q ss_pred CCC
Q psy14456 79 RTR 81 (93)
Q Consensus 79 ~~~ 81 (93)
...
T Consensus 107 ~g~ 109 (316)
T 1ijq_A 107 KGV 109 (316)
T ss_dssp TSS
T ss_pred CCC
Confidence 643
No 287
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=68.30 E-value=17 Score=21.86 Aligned_cols=59 Identities=10% Similarity=-0.054 Sum_probs=36.6
Q ss_pred ceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 20 SLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 20 ~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
..++... +-|.+.+||++++.++..-.-..+.+..- ......-++....+|.+.--.+.
T Consensus 272 gviyviT-K~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~ 331 (365)
T 2xzh_A 272 DVVFLIT-KYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVE 331 (365)
T ss_dssp TEEEEEE-TTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEEC
T ss_pred CEEEEEe-CCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEEC
Confidence 3444443 68999999999999987665555555433 33334445555566666554444
No 288
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=66.34 E-value=22 Score=22.60 Aligned_cols=58 Identities=17% Similarity=0.118 Sum_probs=40.0
Q ss_pred CeEEEEeCCCCceeEEeec--cc--------cceEEE-Ee-cCC---CEEEEecCCCcEEEEeCCCCceeeEec
Q psy14456 30 CKIYVTDCATGQAFQALSG--HS--------GHVLSL-YN-WGG---ATVLSGSHDRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 30 ~~v~~~~~~~~~~~~~~~~--~~--------~~v~~~-~~-~~~---~~~~s~~~~~~i~~~d~~~~~~~~~~~ 88 (93)
..+..+|.++++.+-.++. |. .++. . .. .++ ..++.++.++.+.++|.++|+.+....
T Consensus 278 ~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 278 MTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp SEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 4788999999988766543 21 1121 2 22 456 456778899999999999998776553
No 289
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=58.23 E-value=32 Score=21.65 Aligned_cols=59 Identities=10% Similarity=-0.054 Sum_probs=37.2
Q ss_pred ceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCC
Q psy14456 20 SLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLR 79 (93)
Q Consensus 20 ~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~ 79 (93)
..++... +-|.+.+||++++.++..-.-..+.+..- ......-++....+|.+.--.+.
T Consensus 271 gviyviT-K~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~ 330 (494)
T 1bpo_A 271 DVVFLIT-KYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVE 330 (494)
T ss_dssp TEEEEEE-TTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEEC
T ss_pred CEEEEEe-cCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEc
Confidence 4444444 68999999999999987665555555433 34444455555666666554443
No 290
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=55.72 E-value=36 Score=21.50 Aligned_cols=59 Identities=14% Similarity=0.045 Sum_probs=40.7
Q ss_pred CeEEEEeCCCCceeEEeec--cc--------cceEEEEe-cCCC---EEEEecCCCcEEEEeCCCCceeeEec
Q psy14456 30 CKIYVTDCATGQAFQALSG--HS--------GHVLSLYN-WGGA---TVLSGSHDRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 30 ~~v~~~~~~~~~~~~~~~~--~~--------~~v~~~~~-~~~~---~~~s~~~~~~i~~~d~~~~~~~~~~~ 88 (93)
+.|..+|.++++.+-.++. |. .++..-.. .++. .++.++.++.+.++|.++|+.+..+.
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 363 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFP 363 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccc
Confidence 5899999999998766542 21 12211022 3563 67788899999999999998776554
No 291
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=50.60 E-value=37 Score=20.14 Aligned_cols=77 Identities=16% Similarity=0.008 Sum_probs=43.7
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeec--cccceEEE-EecCCCEEEEecCCCcEEEEeCCCCc
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSG--HSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRG 82 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~--~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~ 82 (93)
-..++++++ ...++-+......|..++++.......... .-.....+ +. .+.++.+-...+.|..+|..+++
T Consensus 248 P~glavd~~----~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~ 322 (400)
T 3p5b_L 248 PNGITLDLL----SGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGS 322 (400)
T ss_dssp EEEEEEETT----TTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCC
T ss_pred eEEEEEEeC----CCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCC
Confidence 467788876 445554454578888888764433222221 12333455 42 33455565667788888876665
Q ss_pred eeeEe
Q psy14456 83 CTNVL 87 (93)
Q Consensus 83 ~~~~~ 87 (93)
....+
T Consensus 323 ~~~~i 327 (400)
T 3p5b_L 323 DVNLL 327 (400)
T ss_dssp CCEEE
T ss_pred ceEEE
Confidence 44444
No 292
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=49.95 E-value=34 Score=19.43 Aligned_cols=76 Identities=14% Similarity=0.018 Sum_probs=45.1
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEe-ec--cccceEEE-EecCCCEEEEecCCCcEEEEeCCCC
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQAL-SG--HSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~-~~--~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~ 81 (93)
-..++++++ +..++.+....+.|..++.+... ...+ .. .-.....+ +. .+.++.+-...+.|..++..++
T Consensus 166 P~gla~d~~----~~~lY~~D~~~~~I~~~d~dg~~-~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g 239 (316)
T 1ijq_A 166 PNGITLDLL----SGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTG 239 (316)
T ss_dssp EEEEEEETT----TTEEEEEETTTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTC
T ss_pred ceEEEEecc----CCEEEEEECCCCeEEEEecCCCc-eEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCC
Confidence 457788876 44555445457888888886432 2222 11 12334556 54 3555666667788888887766
Q ss_pred ceeeEe
Q psy14456 82 GCTNVL 87 (93)
Q Consensus 82 ~~~~~~ 87 (93)
.....+
T Consensus 240 ~~~~~i 245 (316)
T 1ijq_A 240 SDVNLL 245 (316)
T ss_dssp CCCEEE
T ss_pred cceEEE
Confidence 654444
No 293
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=49.35 E-value=39 Score=20.01 Aligned_cols=69 Identities=9% Similarity=0.067 Sum_probs=43.2
Q ss_pred eeEEEEEecCCCCcceEEEeeeCC-CeEEEEeCCCCceeEEee------ccccceEEE-EecCCCEEEEecCCCcEEEEe
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGD-CKIYVTDCATGQAFQALS------GHSGHVLSL-YNWGGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~-~~v~~~~~~~~~~~~~~~------~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d 77 (93)
...++..++ ++.+++.. .. +.|...+.+.. .+..+. ........| +.|++..|+....++.+..+|
T Consensus 139 ~nDvavD~~----GnaYVt~s-~~~~~I~rV~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD 212 (334)
T 2p9w_A 139 VVQSAQDRD----GNSYVAFA-LGMPAIARVSADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFD 212 (334)
T ss_dssp EEEEEECTT----SCEEEEEE-ESSCEEEEECTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEE
T ss_pred CceeEECCC----CCEEEeCC-CCCCeEEEEeCCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEc
Confidence 567777777 56666544 35 66665554433 222221 111235578 999998887776699999999
Q ss_pred CCC
Q psy14456 78 LRT 80 (93)
Q Consensus 78 ~~~ 80 (93)
+.+
T Consensus 213 ~~~ 215 (334)
T 2p9w_A 213 VSK 215 (334)
T ss_dssp CSS
T ss_pred CCC
Confidence 874
No 294
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=48.91 E-value=50 Score=21.16 Aligned_cols=73 Identities=5% Similarity=-0.079 Sum_probs=41.9
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecC-CCEEEEecCCCcEEEEeCCCC
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG-GATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~-~~~~~s~~~~~~i~~~d~~~~ 81 (93)
....++|++. ...++-+...++.|..++++.......+.........+ +.+. +++..+-...+.|.+.++...
T Consensus 38 ~~~~l~~d~~----~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~ 112 (628)
T 4a0p_A 38 EASALDFDVT----DNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQ 112 (628)
T ss_dssp CEEEEEEETT----TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTST
T ss_pred ceEEEEEECC----CCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCC
Confidence 4567888886 34444444457888888876543322222222334566 6764 444445556677888877543
No 295
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=45.75 E-value=45 Score=19.68 Aligned_cols=65 Identities=9% Similarity=0.112 Sum_probs=39.8
Q ss_pred ceEEEeeeCCCeEEEEeCCCCceeEEeeccc-cceEEEEec----CCCEEEEe-cCCCcEEEEeCCCCceee
Q psy14456 20 SLLISGGAGDCKIYVTDCATGQAFQALSGHS-GHVLSLYNW----GGATVLSG-SHDRTVRFWDLRTRGCTN 85 (93)
Q Consensus 20 ~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~-~~v~~~~~~----~~~~~~s~-~~~~~i~~~d~~~~~~~~ 85 (93)
..++.+. .||.|..+|..+|+.+-.+.... .+....-.+ ++..++.. ..|+.+..++..+|....
T Consensus 11 ~~V~v~t-~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~ 81 (339)
T 2be1_A 11 DILIAAD-VEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKL 81 (339)
T ss_dssp EEEEEEE-TTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEE
T ss_pred CEEEEEe-CCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEe
Confidence 3444544 69999999999999887775431 222221001 12333333 579999999988875443
No 296
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=45.14 E-value=61 Score=21.08 Aligned_cols=74 Identities=14% Similarity=0.086 Sum_probs=43.3
Q ss_pred cceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeec--------cccceEEE-EecCCCEEEEecCCCcEE
Q psy14456 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSG--------HSGHVLSL-YNWGGATVLSGSHDRTVR 74 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~--------~~~~v~~~-~~~~~~~~~s~~~~~~i~ 74 (93)
..|.++...++ +..-+. ..++-+..|+..++....-... ....|.++ ...++..+-.+..++-+.
T Consensus 357 ~~V~~i~~d~~----g~lWiG--t~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~ 430 (795)
T 4a2l_A 357 NVVSCIVEDKD----KNLWIG--TNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLS 430 (795)
T ss_dssp SSEEEEEECTT----SCEEEE--ESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEE
T ss_pred CeeEEEEECCC----CCEEEE--ECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCcee
Confidence 34777766655 444443 2466678888776653322111 13567788 677777333455556688
Q ss_pred EEeCCCCce
Q psy14456 75 FWDLRTRGC 83 (93)
Q Consensus 75 ~~d~~~~~~ 83 (93)
.+|..++..
T Consensus 431 ~~d~~~~~~ 439 (795)
T 4a2l_A 431 ILHRNSGQV 439 (795)
T ss_dssp EEETTTCCE
T ss_pred EEeCCCCcE
Confidence 888876643
No 297
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=44.92 E-value=50 Score=19.95 Aligned_cols=59 Identities=12% Similarity=0.112 Sum_probs=37.9
Q ss_pred CCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC-CceeeEecCc
Q psy14456 29 DCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT-RGCTNVLTPI 90 (93)
Q Consensus 29 ~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~-~~~~~~~~~~ 90 (93)
...+.++++++.+.++.+.= ...+... |- +...++-.. +..+.-|++.. ..+.+.|..|
T Consensus 86 g~~LQiFnletK~klks~~~-~e~VvfWkWi-s~~~L~lVT-~taVyHWs~~~~s~P~kvFdR~ 146 (365)
T 2xzh_A 86 GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWI-SLNTVALVT-DNAVYHWSMEGESQPVKMFDRH 146 (365)
T ss_dssp TTEEEEEETTTTEEEEEEEC-SSCEEEEEEC-SSSEEEEEE-SSEEEEEESSTTCCCEEEEECC
T ss_pred CCeEEEechHHhhhhcceec-CCccEEEEec-CCCeEEEEc-CCcEEEEcccCCCCCceeeecc
Confidence 78899999999988877653 3444443 43 344444332 46788898874 3456666544
No 298
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=44.83 E-value=40 Score=18.90 Aligned_cols=67 Identities=12% Similarity=0.178 Sum_probs=41.9
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEe--e-cc------ccceEEE-EecCCCEEEEecCCCcEE
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQAL--S-GH------SGHVLSL-YNWGGATVLSGSHDRTVR 74 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~--~-~~------~~~v~~~-~~~~~~~~~s~~~~~~i~ 74 (93)
.+..++++|.. +.+++.+. .+..+..+|.+ ++.+..+ . +. ....-.+ |.+++++.++ +....+.
T Consensus 174 d~S~l~~dp~t---g~lliLS~-~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y 247 (255)
T 3qqz_A 174 DVSGAEFNQQK---NTLLVLSH-ESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFY 247 (255)
T ss_dssp CCCEEEEETTT---TEEEEEET-TTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEE
T ss_pred CceeEEEcCCC---CeEEEEEC-CCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEE
Confidence 45788899874 55666665 68899998866 4444333 2 11 1234577 8998886665 4555555
Q ss_pred EEe
Q psy14456 75 FWD 77 (93)
Q Consensus 75 ~~d 77 (93)
.+.
T Consensus 248 ~f~ 250 (255)
T 3qqz_A 248 RFT 250 (255)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 299
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=41.55 E-value=77 Score=21.16 Aligned_cols=73 Identities=15% Similarity=-0.016 Sum_probs=38.1
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCC----ceeEEeeccccceEEE-EecCC-CEEEEecCCCcEEEEeC
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG----QAFQALSGHSGHVLSL-YNWGG-ATVLSGSHDRTVRFWDL 78 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~----~~~~~~~~~~~~v~~~-~~~~~-~~~~s~~~~~~i~~~d~ 78 (93)
.+..++|.+. ...++-+....+.|..++++.. .....+.........+ +.+.+ +++.+-...+.|.+.++
T Consensus 425 ~~~gl~~d~~----~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~l 500 (791)
T 3m0c_C 425 NVVALDTEVA----SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 500 (791)
T ss_dssp SEEEEEEETT----TTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ceEEEeeccc----CCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeC
Confidence 4566777765 3334433334677777776542 1122222222334566 77655 44445556678888887
Q ss_pred CCC
Q psy14456 79 RTR 81 (93)
Q Consensus 79 ~~~ 81 (93)
...
T Consensus 501 dG~ 503 (791)
T 3m0c_C 501 KGV 503 (791)
T ss_dssp TSS
T ss_pred CCC
Confidence 644
No 300
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=39.63 E-value=83 Score=21.00 Aligned_cols=71 Identities=6% Similarity=-0.135 Sum_probs=38.4
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEE-EEecCC-CcEEEEeCCC
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATV-LSGSHD-RTVRFWDLRT 80 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~-~s~~~~-~~i~~~d~~~ 80 (93)
...+++.+. +..|+.+....+.|.+.+++.......+...-.....| +.+....| .+-... ..|...++..
T Consensus 473 P~GLAvD~~----~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG 546 (791)
T 3m0c_C 473 PDGLAVDWI----HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 546 (791)
T ss_dssp CCEEEEETT----TTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred cceeeeeec----CCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCC
Confidence 345666655 33444444457888888876444333333333445677 78754433 343222 5677776653
No 301
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=39.30 E-value=75 Score=20.41 Aligned_cols=76 Identities=7% Similarity=-0.035 Sum_probs=43.7
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCCCcee
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCT 84 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~~~~ 84 (93)
...++++++ +..++-+....+.|...+++.... ..+...-.....+ +.. +.++.+-...+.|...|..++...
T Consensus 168 P~GlalD~~----~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~ 241 (628)
T 4a0p_A 168 ANGLTIDYA----KRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNR 241 (628)
T ss_dssp EEEEEEETT----TTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSC
T ss_pred cceEEEccc----cCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCce
Confidence 456777776 444554444577888888765433 2232223334455 543 445555556788888887776544
Q ss_pred eEe
Q psy14456 85 NVL 87 (93)
Q Consensus 85 ~~~ 87 (93)
..+
T Consensus 242 ~~l 244 (628)
T 4a0p_A 242 TII 244 (628)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 302
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=39.07 E-value=77 Score=20.45 Aligned_cols=56 Identities=18% Similarity=0.240 Sum_probs=33.7
Q ss_pred eEEEEEecCCCCcceEEEeeeC-----------CCeEEEEeCCCCceeEEeecc-ccceEEE-EecCCCEEEE
Q psy14456 7 RDVCFIEDTSNKSSLLISGGAG-----------DCKIYVTDCATGQAFQALSGH-SGHVLSL-YNWGGATVLS 66 (93)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~g~~-----------~~~v~~~~~~~~~~~~~~~~~-~~~v~~~-~~~~~~~~~s 66 (93)
-.|.|+|. +.++++.... +..+.+.+..+++...-+.+. ..+++.+ |+|+++.++.
T Consensus 479 DNL~fd~~----G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfv 547 (592)
T 3zwu_A 479 DGLGFDKA----GRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp EEEEECTT----CCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEE
T ss_pred cceEECCC----CCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEE
Confidence 45677777 5666654321 123455566666665444443 4688888 9998876653
No 303
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=38.72 E-value=64 Score=19.41 Aligned_cols=30 Identities=13% Similarity=0.061 Sum_probs=21.8
Q ss_pred EEE-Eec-CCCEEEEecCCCcEEEEeCCCCce
Q psy14456 54 LSL-YNW-GGATVLSGSHDRTVRFWDLRTRGC 83 (93)
Q Consensus 54 ~~~-~~~-~~~~~~s~~~~~~i~~~d~~~~~~ 83 (93)
..+ +++ ++.++++-..++.|..++...+..
T Consensus 229 ~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~ 260 (430)
T 3tc9_A 229 NGAETHPINGELYFNSWNAGQVFRYDFTTQET 260 (430)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEEETTTTEE
T ss_pred eEEEEeCCCCEEEEEECCCCEEEEEECCCCcE
Confidence 455 788 677777766778888888876543
No 304
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=38.04 E-value=57 Score=18.68 Aligned_cols=71 Identities=14% Similarity=0.168 Sum_probs=40.1
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCcee-EEeeccccceEEE-Eec-CCCEEEEecCCCcEEEEeCCC
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAF-QALSGHSGHVLSL-YNW-GGATVLSGSHDRTVRFWDLRT 80 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~v~~~-~~~-~~~~~~s~~~~~~i~~~d~~~ 80 (93)
...++|.+. ...++-+....+.|..++.+.+... ..+...-.....+ +.+ .+.+..+-...+.|.+++...
T Consensus 37 ~~~ld~d~~----~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG 110 (318)
T 3sov_A 37 AAAVDFVFS----HGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDG 110 (318)
T ss_dssp EEEEEEEGG----GTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred cEEEEEEeC----CCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCC
Confidence 557788876 3444444445788888887655321 1111112233456 676 444555555667888888764
No 305
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=35.89 E-value=83 Score=19.92 Aligned_cols=59 Identities=12% Similarity=0.071 Sum_probs=37.9
Q ss_pred CCeEEEEeCCCCceeEEeeccccceEEE-EecCCCEEEEecCCCcEEEEeCCC-CceeeEecCc
Q psy14456 29 DCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT-RGCTNVLTPI 90 (93)
Q Consensus 29 ~~~v~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~-~~~~~~~~~~ 90 (93)
...+.++++++.+.++.+.=. ..|... |-. .+.++-. .+..+.-|++.. ..+.+.|..|
T Consensus 85 g~~lQiFnle~K~klks~~~~-e~VvfWkWis-~~~l~lV-T~taVyHWsi~~~s~P~kvFdR~ 145 (494)
T 1bpo_A 85 GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWIS-LNTVALV-TDNAVYHWSMEGESQPVKMFDRH 145 (494)
T ss_dssp TTEEEEEETTTTEEEEEEECS-SCCCEEEEEE-TTEEEEE-CSSEEEEEESSSSCCCEEEEECC
T ss_pred CCeEEEEchHHhhhhcceecC-CCceEEEecC-CCeEEEE-cCCeeEEecccCCCCchhheecc
Confidence 789999999998888776533 344444 433 3444433 356888999874 3456666544
No 306
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=35.57 E-value=60 Score=18.20 Aligned_cols=72 Identities=15% Similarity=0.208 Sum_probs=41.4
Q ss_pred ceeEEEEEe-cCCCCcceEEEeeeCCCeEEEEeCCCCceeEEee----c-cccceEEE-Eec-CCCEEEEecC-------
Q psy14456 5 TVRDVCFIE-DTSNKSSLLISGGAGDCKIYVTDCATGQAFQALS----G-HSGHVLSL-YNW-GGATVLSGSH------- 69 (93)
Q Consensus 5 ~v~~~~~~~-~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~----~-~~~~v~~~-~~~-~~~~~~s~~~------- 69 (93)
....+++.+ + +.++++.. ...+..++..++.. ..+. + .......+ +.+ ++.+.++-..
T Consensus 81 ~p~gi~~~~~~----g~l~v~d~--~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~ 153 (322)
T 2fp8_A 81 RTYDISYNLQN----NQLYIVDC--YYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRG 153 (322)
T ss_dssp CEEEEEEETTT----TEEEEEET--TTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTC
T ss_pred CCceEEEcCCC----CcEEEEEC--CCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccc
Confidence 456788886 4 45555432 44477777665432 2221 1 11235677 888 8887776432
Q ss_pred ----------CCcEEEEeCCCCce
Q psy14456 70 ----------DRTVRFWDLRTRGC 83 (93)
Q Consensus 70 ----------~~~i~~~d~~~~~~ 83 (93)
++.+..+|..++..
T Consensus 154 ~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 154 VQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp HHHHHHHTCCCEEEEEEETTTTEE
T ss_pred cceehcccCCCceEEEEeCCCCEE
Confidence 35678888766543
No 307
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=34.43 E-value=91 Score=19.97 Aligned_cols=74 Identities=14% Similarity=0.100 Sum_probs=40.8
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCceeE-EeeccccceEEE-EecC-CCEEEEecCCCcEEEEeCCCC
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQ-ALSGHSGHVLSL-YNWG-GATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~-~~~~~~~~v~~~-~~~~-~~~~~s~~~~~~i~~~d~~~~ 81 (93)
....++|++. ...++-+....+.|..++++...... .+...-.....+ +.+. +.+..+-...+.|.+.++...
T Consensus 41 ~~~~ld~~~~----~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~ 116 (619)
T 3s94_A 41 DAAAVDFVFS----HGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS 116 (619)
T ss_dssp CEEEEEEETT----TTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred ceEEEEEEeC----CCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCC
Confidence 3567788776 34444444456777777766443212 222222345677 8874 445555567788888888654
Q ss_pred c
Q psy14456 82 G 82 (93)
Q Consensus 82 ~ 82 (93)
.
T Consensus 117 ~ 117 (619)
T 3s94_A 117 L 117 (619)
T ss_dssp S
T ss_pred C
Confidence 3
No 308
>2oqj_C Peptide 2G12.1 (ACPPSHVLDMRSGTCLAAEGK); immunoglobulin fold, immune system; 2.80A {Homo sapiens}
Probab=32.86 E-value=21 Score=12.05 Aligned_cols=13 Identities=23% Similarity=0.555 Sum_probs=8.3
Q ss_pred EEEeCCCCceeeE
Q psy14456 74 RFWDLRTRGCTNV 86 (93)
Q Consensus 74 ~~~d~~~~~~~~~ 86 (93)
.+.|.++|.|+..
T Consensus 6 hvldmrsgtclaa 18 (26)
T 2oqj_C 6 HVLDMRSGTCLAA 18 (26)
T ss_pred heeeccCCceEee
Confidence 3567777776543
No 309
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=32.47 E-value=1e+02 Score=20.05 Aligned_cols=71 Identities=14% Similarity=0.104 Sum_probs=42.4
Q ss_pred cceeEEEEEecCCCCcc-eEEEeeeCCCeEEEEeCCCCceeEEee----ccccceEEE-EecCCCEEEEecCCCcEEEEe
Q psy14456 4 GTVRDVCFIEDTSNKSS-LLISGGAGDCKIYVTDCATGQAFQALS----GHSGHVLSL-YNWGGATVLSGSHDRTVRFWD 77 (93)
Q Consensus 4 ~~v~~~~~~~~~~~~~~-~~~~~g~~~~~v~~~~~~~~~~~~~~~----~~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d 77 (93)
..|.++...++ +. +.+. . .++-+..++..+++...-.. .....+.++ ...++.+.+... .-+..||
T Consensus 406 ~~v~~i~~d~~----g~~lWig-t-~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~--~Gl~~~~ 477 (795)
T 4a2l_A 406 NNIKAVYVDEK----KSLVYIG-T-HAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL--SALVRFN 477 (795)
T ss_dssp SCEEEEEEETT----TTEEEEE-E-TTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES--SCEEEEE
T ss_pred ccEEEEEEcCC----CCEEEEE-e-CcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec--CceeEEe
Confidence 45677776655 55 4443 2 35678888887765432211 123567787 677777666443 3477788
Q ss_pred CCCCc
Q psy14456 78 LRTRG 82 (93)
Q Consensus 78 ~~~~~ 82 (93)
..++.
T Consensus 478 ~~~~~ 482 (795)
T 4a2l_A 478 PEQRS 482 (795)
T ss_dssp TTTTE
T ss_pred CCCCe
Confidence 77654
No 310
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=31.65 E-value=79 Score=18.42 Aligned_cols=69 Identities=12% Similarity=0.065 Sum_probs=39.2
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCc-eeEEee---ccccceEEE-EecC----CCEEEEecC---C--
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQ-AFQALS---GHSGHVLSL-YNWG----GATVLSGSH---D-- 70 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~-~~~~~~---~~~~~v~~~-~~~~----~~~~~s~~~---~-- 70 (93)
.-..++|.|+ +.++++. +++.|.+++. .+. .+..+. ........+ ++|+ +.+.++-.. +
T Consensus 30 ~P~~ia~~pd----G~l~V~e--~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~ 102 (354)
T 3a9g_A 30 VPWSIAPLGG----GRYLVTE--RPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGH 102 (354)
T ss_dssp CEEEEEEEET----TEEEEEE--TTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGC
T ss_pred CCeEEEEcCC----CeEEEEe--CCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCC
Confidence 3467899998 6655553 4799998873 443 222211 123456778 8886 444444332 2
Q ss_pred --CcEEEEeCCC
Q psy14456 71 --RTVRFWDLRT 80 (93)
Q Consensus 71 --~~i~~~d~~~ 80 (93)
..|..++...
T Consensus 103 ~~~~v~r~~~~~ 114 (354)
T 3a9g_A 103 IRNRVIRGRLDG 114 (354)
T ss_dssp EEEEEEEEEECS
T ss_pred cceEEEEEEECC
Confidence 4566666554
No 311
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=31.03 E-value=90 Score=18.85 Aligned_cols=60 Identities=8% Similarity=-0.043 Sum_probs=39.5
Q ss_pred CCeEEEEeCCCC--ceeEEeec------cccceEEE-Ee-cC------CCE-EEEecCCCcEEEEeCCCCceeeEec
Q psy14456 29 DCKIYVTDCATG--QAFQALSG------HSGHVLSL-YN-WG------GAT-VLSGSHDRTVRFWDLRTRGCTNVLT 88 (93)
Q Consensus 29 ~~~v~~~~~~~~--~~~~~~~~------~~~~v~~~-~~-~~------~~~-~~s~~~~~~i~~~d~~~~~~~~~~~ 88 (93)
...|-+||+.++ +.++.+.- ..+.+..+ +. .+ ... .++=....-|.++|+.+++..+...
T Consensus 122 ~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~ 198 (381)
T 3q6k_A 122 RPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTH 198 (381)
T ss_dssp CCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred CceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEcc
Confidence 346788999998 87765531 23456677 76 21 222 2333456789999999998887764
No 312
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=28.66 E-value=1.1e+02 Score=19.20 Aligned_cols=59 Identities=14% Similarity=0.131 Sum_probs=34.8
Q ss_pred eeEEEEEe-cCCCCcceEEEeeeCCCeEEEEeCCCCceeEEeecc---ccceEEE-E-------ecCCCEEEEec
Q psy14456 6 VRDVCFIE-DTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGH---SGHVLSL-Y-------NWGGATVLSGS 68 (93)
Q Consensus 6 v~~~~~~~-~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~---~~~v~~~-~-------~~~~~~~~s~~ 68 (93)
...++|+| +. +.++++-. ..+.|++.|+..+......... .+....+ | ++++..++...
T Consensus 141 p~~la~dp~~~---~~Lyv~~~-~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad 211 (496)
T 3kya_A 141 NGRLAFDPLNK---DHLYICYD-GHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAI 211 (496)
T ss_dssp EEEEEEETTEE---EEEEEEEE-TEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEE
T ss_pred CCEEEEccCCC---CEEEEEEC-CCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEe
Confidence 45788887 31 34444433 3567888887776654433221 2346778 8 88888555444
No 313
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=27.69 E-value=85 Score=17.50 Aligned_cols=73 Identities=12% Similarity=0.091 Sum_probs=37.6
Q ss_pred ceeEEEEEecCCCCcceEEEeeeCCC-eEEEEeCCCCceeEEeec-cccceEEE-EecCCCEEEEecCCCcEEEEeCCCC
Q psy14456 5 TVRDVCFIEDTSNKSSLLISGGAGDC-KIYVTDCATGQAFQALSG-HSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTR 81 (93)
Q Consensus 5 ~v~~~~~~~~~~~~~~~~~~~g~~~~-~v~~~~~~~~~~~~~~~~-~~~~v~~~-~~~~~~~~~s~~~~~~i~~~d~~~~ 81 (93)
....+++.++ ++++++....++ .+..++..+++....... .......+ ..+++..+++-..++.+..+|...+
T Consensus 73 ~p~gia~~~d----G~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 73 KVSGLAFTSN----GDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp EEEEEEECTT----SCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred CceeEEEcCC----CcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCC
Confidence 4567778777 565555432122 466666666654322211 11112233 3344444555545778888887653
No 314
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=26.79 E-value=2e+02 Score=21.53 Aligned_cols=32 Identities=13% Similarity=-0.034 Sum_probs=20.6
Q ss_pred eEEEeeeCCCeEEEEeCCCCceeEEeeccccce
Q psy14456 21 LLISGGAGDCKIYVTDCATGQAFQALSGHSGHV 53 (93)
Q Consensus 21 ~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~v 53 (93)
.+.... +-|.+.++|+.++.++..-.-...++
T Consensus 272 ~iy~it-k~G~~~~~d~~t~~~i~~~ris~~~i 303 (1630)
T 1xi4_A 272 VVFLIT-KYGYIHLYDLETGTCIYMNRISGETI 303 (1630)
T ss_pred EEEEEe-cCceEEEEecccchhhhhccccCCce
Confidence 344433 58999999999998765443333333
No 315
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=24.78 E-value=1.1e+02 Score=17.76 Aligned_cols=67 Identities=16% Similarity=0.143 Sum_probs=38.3
Q ss_pred eeEEEEEecCCCCcceEEEeeeCCCeEEEEeCCCCce--eEEee---ccccceEEE-EecC---C-CEEEEecCC-----
Q psy14456 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQA--FQALS---GHSGHVLSL-YNWG---G-ATVLSGSHD----- 70 (93)
Q Consensus 6 v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~--~~~~~---~~~~~v~~~-~~~~---~-~~~~s~~~~----- 70 (93)
-..++|.|+ +..+++. +.+.|.+++ .+.. +..+. ........+ ++++ + .+.++-...
T Consensus 33 P~~ia~~pd----G~l~V~e--~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~ 104 (352)
T 2ism_A 33 PWALAFLPD----GGMLIAE--RPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLR 104 (352)
T ss_dssp EEEEEECTT----SCEEEEE--TTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSE
T ss_pred ceEEEEcCC----CeEEEEe--CCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCc
Confidence 457888888 6655553 478998887 3332 22221 123456778 8887 3 344433322
Q ss_pred CcEEEEeCCC
Q psy14456 71 RTVRFWDLRT 80 (93)
Q Consensus 71 ~~i~~~d~~~ 80 (93)
..|..++...
T Consensus 105 ~~v~r~~~~~ 114 (352)
T 2ism_A 105 NQVVRLRHLG 114 (352)
T ss_dssp EEEEEEEECS
T ss_pred cEEEEEEeCC
Confidence 5666677654
No 316
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=21.55 E-value=1.4e+02 Score=17.91 Aligned_cols=70 Identities=9% Similarity=0.108 Sum_probs=41.5
Q ss_pred ceeEEEE--EecCCCCcc-eEEEeeeCCCeEEEEeCC-------CCceeEEeeccccceEEE-EecCCCEEEEecCCCcE
Q psy14456 5 TVRDVCF--IEDTSNKSS-LLISGGAGDCKIYVTDCA-------TGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTV 73 (93)
Q Consensus 5 ~v~~~~~--~~~~~~~~~-~~~~~g~~~~~v~~~~~~-------~~~~~~~~~~~~~~v~~~-~~~~~~~~~s~~~~~~i 73 (93)
.++.+++ +|.. +. +++..+ +++.+..|++. +.+.+..+.- .+.+-.+ ..+....++.+-.+.-|
T Consensus 129 ~pyGlcly~~~~~---g~~yafV~~-k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~GI 203 (355)
T 3amr_A 129 EVYGFTLYHSQKT---GKYYAMVTG-KEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEAI 203 (355)
T ss_dssp SCCCEEEEECTTT---CCEEEEEEC-SSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTEE
T ss_pred CeeEEEEEecCCC---CcEEEEEEC-CCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEecccceE
Confidence 3455666 4432 33 455555 68999998873 2244555543 2344455 77766777777777666
Q ss_pred EEEeCC
Q psy14456 74 RFWDLR 79 (93)
Q Consensus 74 ~~~d~~ 79 (93)
..++.+
T Consensus 204 w~~da~ 209 (355)
T 3amr_A 204 WKFSAE 209 (355)
T ss_dssp EEEECS
T ss_pred EEEeCC
Confidence 666654
Done!