Your job contains 1 sequence.
>psy14456
MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWG
GATVLSGSHDRTVRFWDLRTRGCTNVLTPITVP
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14456
(93 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0034931 - symbol:CG2812 species:7227 "Drosophila m... 336 1.8e-30 1
UNIPROTKB|O94967 - symbol:WDR47 "WD repeat-containing pro... 295 6.3e-25 1
MGI|MGI:2139593 - symbol:Wdr47 "WD repeat domain 47" spec... 295 6.3e-25 1
WB|WBGene00019434 - symbol:nmtn-1 species:6239 "Caenorhab... 266 8.3e-22 1
DICTYBASE|DDB_G0290687 - symbol:mhkC "myosin heavy chain ... 142 1.2e-08 1
POMBASE|SPBC713.04c - symbol:SPBC713.04c "U3 snoRNP-assoc... 135 7.3e-08 1
ASPGD|ASPL0000008575 - symbol:AN6217 species:162425 "Emer... 130 1.6e-07 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 125 2.4e-07 1
CGD|CAL0005939 - symbol:TUP1 species:5476 "Candida albica... 125 4.3e-07 1
UNIPROTKB|P0CY34 - symbol:TUP1 "Transcriptional repressor... 125 4.3e-07 1
SGD|S000000668 - symbol:RSA4 "WD-repeat protein involved ... 125 4.3e-07 1
GENEDB_PFALCIPARUM|PFC0100c - symbol:PFC0100c "regulatory... 112 4.4e-07 2
UNIPROTKB|O97334 - symbol:PFC0100c "Regulatory protein, p... 112 4.4e-07 2
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 123 5.1e-07 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 123 5.1e-07 1
ASPGD|ASPL0000055088 - symbol:AN10058 species:162425 "Eme... 124 5.6e-07 1
UNIPROTKB|F1MPQ0 - symbol:THOC6 "Uncharacterized protein"... 121 5.9e-07 1
UNIPROTKB|Q0VCN2 - symbol:MORG1 "Mitogen-activated protei... 120 6.5e-07 1
MGI|MGI:1915086 - symbol:Wdr83 "WD repeat domain containi... 120 6.5e-07 1
RGD|1306947 - symbol:Wdr83 "WD repeat domain 83" species:... 120 6.5e-07 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 122 6.5e-07 1
DICTYBASE|DDB_G0286735 - symbol:DDB_G0286735 "C3HC4-type ... 125 6.6e-07 1
UNIPROTKB|I3L928 - symbol:THOC6 "Uncharacterized protein"... 119 9.7e-07 1
ASPGD|ASPL0000031743 - symbol:AN8505 species:162425 "Emer... 124 1.3e-06 1
UNIPROTKB|F1SEX9 - symbol:WDR83 "Uncharacterized protein"... 117 1.3e-06 1
UNIPROTKB|E1BYR9 - symbol:ATG16L1 "Uncharacterized protei... 121 1.5e-06 1
CGD|CAL0002484 - symbol:CDC4 species:5476 "Candida albica... 122 1.6e-06 1
UNIPROTKB|Q5A9A6 - symbol:CDC4 "Potential ubiquitin ligas... 122 1.6e-06 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 116 1.7e-06 1
DICTYBASE|DDB_G0292834 - symbol:DDB_G0292834 "cyclin-like... 120 1.7e-06 1
UNIPROTKB|G4MWF1 - symbol:MGG_08345 "Uncharacterized prot... 123 1.8e-06 1
UNIPROTKB|E2RRL3 - symbol:WDR83 "Uncharacterized protein"... 116 1.8e-06 1
UNIPROTKB|Q9BRX9 - symbol:WDR83 "WD repeat domain-contain... 116 1.8e-06 1
SGD|S000000680 - symbol:TUP1 "General repressor of transc... 121 1.8e-06 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 116 2.0e-06 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 116 2.0e-06 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 116 2.0e-06 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 116 2.0e-06 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 116 2.0e-06 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 116 2.0e-06 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 116 2.0e-06 1
TAIR|locus:2035449 - symbol:AT1G19750 "AT1G19750" species... 118 2.0e-06 1
TAIR|locus:2029815 - symbol:ATCSA-1 "AT1G27840" species:3... 117 2.6e-06 1
UNIPROTKB|Q86W42 - symbol:THOC6 "THO complex subunit 6 ho... 115 2.7e-06 1
RGD|708553 - symbol:Thoc6 "THO complex 6 homolog (Drosoph... 114 3.4e-06 1
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 114 4.7e-06 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 112 4.9e-06 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 120 5.1e-06 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 112 5.3e-06 1
TAIR|locus:2028481 - symbol:SCD1 "STOMATAL CYTOKINESIS-DE... 119 5.6e-06 1
MGI|MGI:2677480 - symbol:Thoc6 "THO complex 6 homolog (Dr... 112 5.7e-06 1
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 113 6.1e-06 1
UNIPROTKB|G4NDD2 - symbol:MGG_00946 "Poly(A)+ RNA export ... 112 6.2e-06 1
UNIPROTKB|F1SM42 - symbol:ATG16L1 "Uncharacterized protei... 115 6.3e-06 1
UNIPROTKB|E2R5F8 - symbol:ATG16L1 "Uncharacterized protei... 115 6.5e-06 1
UNIPROTKB|Q676U5 - symbol:ATG16L1 "Autophagy-related prot... 115 6.5e-06 1
UNIPROTKB|E1BGS8 - symbol:ATG16L1 "Uncharacterized protei... 115 6.7e-06 1
TAIR|locus:2176085 - symbol:AT5G64730 "AT5G64730" species... 110 7.3e-06 1
TAIR|locus:2050064 - symbol:AT2G21390 species:3702 "Arabi... 118 7.3e-06 1
ZFIN|ZDB-GENE-070112-342 - symbol:gnb5a "guanine nucleoti... 111 7.8e-06 1
ASPGD|ASPL0000042645 - symbol:AN1468 species:162425 "Emer... 113 8.6e-06 1
UNIPROTKB|C9JIS1 - symbol:GNB2 "Guanine nucleotide-bindin... 107 8.7e-06 1
SGD|S000001885 - symbol:CDC4 "F-box protein required for ... 115 9.0e-06 1
UNIPROTKB|B3KPU1 - symbol:GNB2 "Guanine nucleotide-bindin... 107 9.5e-06 1
ASPGD|ASPL0000054968 - symbol:AN1387 species:162425 "Emer... 109 9.8e-06 1
WB|WBGene00007972 - symbol:prp-4 species:6239 "Caenorhabd... 112 1.0e-05 1
UNIPROTKB|C9JXA5 - symbol:GNB2 "Guanine nucleotide-bindin... 107 1.1e-05 1
SGD|S000003648 - symbol:MDV1 "Peripheral protein of cytos... 113 1.3e-05 1
POMBASE|SPCC18.05c - symbol:SPCC18.05c "notchless-like pr... 111 1.3e-05 1
RGD|1310631 - symbol:Atg16l1 "autophagy related 16-like 1... 112 1.4e-05 1
MGI|MGI:1924290 - symbol:Atg16l1 "autophagy related 16-li... 112 1.4e-05 1
UNIPROTKB|H3BPD8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 104 1.4e-05 1
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 104 1.5e-05 1
POMBASE|SPBC1718.01 - symbol:pop1 "cullin 1 adaptor prote... 113 1.5e-05 1
POMBASE|SPCC16A11.02 - symbol:utp13 "U3 snoRNP-associated... 113 1.5e-05 1
UNIPROTKB|E7EP32 - symbol:GNB2 "Guanine nucleotide-bindin... 107 1.5e-05 1
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 110 1.8e-05 1
RGD|1310215 - symbol:Taf5l "TAF5-like RNA polymerase II, ... 100 1.9e-05 1
UNIPROTKB|A4RJV3 - symbol:MDV1 "Mitochondrial division pr... 111 1.9e-05 1
UNIPROTKB|P11017 - symbol:GNB2 "Guanine nucleotide-bindin... 107 2.0e-05 1
UNIPROTKB|E2RD95 - symbol:GNB2 "Uncharacterized protein" ... 107 2.0e-05 1
UNIPROTKB|P62879 - symbol:GNB2 "Guanine nucleotide-bindin... 107 2.0e-05 1
MGI|MGI:95784 - symbol:Gnb2 "guanine nucleotide binding p... 107 2.0e-05 1
RGD|69319 - symbol:Gnb2 "guanine nucleotide binding prote... 107 2.0e-05 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 107 2.0e-05 1
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 108 2.1e-05 1
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 110 2.1e-05 1
RGD|2321145 - symbol:Fbxw7 "F-box and WD repeat domain co... 110 2.1e-05 1
ZFIN|ZDB-GENE-050417-401 - symbol:atg16l1 "ATG16 autophag... 110 2.2e-05 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 107 2.3e-05 1
UNIPROTKB|F1MNN4 - symbol:FBXW7 "Uncharacterized protein"... 110 2.3e-05 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 107 2.3e-05 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 107 2.3e-05 1
MGI|MGI:1354695 - symbol:Fbxw7 "F-box and WD-40 domain pr... 110 2.3e-05 1
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 107 2.7e-05 1
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 107 2.7e-05 1
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 107 2.7e-05 1
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 107 2.7e-05 1
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 107 2.7e-05 1
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 107 2.7e-05 1
WARNING: Descriptions of 237 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0034931 [details] [associations]
symbol:CG2812 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 Gene3D:2.130.10.10 SUPFAM:SSF50978
HSSP:P16649 GeneTree:ENSGT00550000074331 RefSeq:NP_611850.1
UniGene:Dm.11826 ProteinModelPortal:Q9W1G4 SMR:Q9W1G4
MINT:MINT-845989 STRING:Q9W1G4 PRIDE:Q9W1G4
EnsemblMetazoa:FBtr0072140 GeneID:37801 KEGG:dme:Dmel_CG2812
UCSC:CG2812-RA FlyBase:FBgn0034931 InParanoid:Q9W1G4 OMA:HRGSIYC
OrthoDB:EOG4QJQ3T PhylomeDB:Q9W1G4 GenomeRNAi:37801 NextBio:805473
ArrayExpress:Q9W1G4 Bgee:Q9W1G4 Uniprot:Q9W1G4
Length = 348
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 58/87 (66%), Positives = 69/87 (79%)
Query: 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWG 60
MHDGTVRD+CF++D+S KS LL SGGAGDCKIY+TDC TG FQA SGH+GH+LSLY+W
Sbjct: 131 MHDGTVRDMCFLDDSSTKSRLLASGGAGDCKIYITDCGTGTPFQAYSGHTGHILSLYSWN 190
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
A +SGS D+T+RFWDLR N L
Sbjct: 191 NAMFVSGSQDQTIRFWDLRVNVSVNTL 217
>UNIPROTKB|O94967 [details] [associations]
symbol:WDR47 "WD repeat-containing protein 47" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0007275 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CH471122 eggNOG:COG2319
EMBL:AL449266 GO:GO:0005874 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 EMBL:BX679664 EMBL:AB020700 EMBL:AK289789
EMBL:BC034964 EMBL:BC039254 IPI:IPI00217629 IPI:IPI00479795
IPI:IPI00645640 RefSeq:NP_001136023.1 RefSeq:NP_055784.3
UniGene:Hs.570055 ProteinModelPortal:O94967 SMR:O94967
IntAct:O94967 MINT:MINT-1381291 STRING:O94967 PhosphoSite:O94967
PaxDb:O94967 PRIDE:O94967 DNASU:22911 Ensembl:ENST00000357672
Ensembl:ENST00000361054 Ensembl:ENST00000369962
Ensembl:ENST00000369965 GeneID:22911 KEGG:hsa:22911 UCSC:uc001dwi.3
UCSC:uc001dwj.3 UCSC:uc001dwk.2 CTD:22911 GeneCards:GC01M109512
HGNC:HGNC:29141 HPA:HPA027287 HPA:HPA027289 neXtProt:NX_O94967
PharmGKB:PA134937302 HOGENOM:HOG000231412 HOVERGEN:HBG058798
ChiTaRS:WDR47 GenomeRNAi:22911 NextBio:43585 ArrayExpress:O94967
Bgee:O94967 CleanEx:HS_WDR47 Genevestigator:O94967
GermOnline:ENSG00000085433 Uniprot:O94967
Length = 919
Score = 295 (108.9 bits), Expect = 6.3e-25, P = 6.3e-25
Identities = 50/87 (57%), Positives = 62/87 (71%)
Query: 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWG 60
MHDGT+RD+ F+E + ++LIS GAGDC IY TDC GQ ALSGH+GH+L+LY W
Sbjct: 706 MHDGTIRDLAFMEGPESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILALYTWS 765
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
G + SGS D+TVRFWDLR C V+
Sbjct: 766 GWMIASGSQDKTVRFWDLRVPSCVRVV 792
>MGI|MGI:2139593 [details] [associations]
symbol:Wdr47 "WD repeat domain 47" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:2139593 GO:GO:0007275 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0005874 EMBL:AL683823 EMBL:CH466607 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00550000074331
CTD:22911 HOGENOM:HOG000231412 HOVERGEN:HBG058798 EMBL:AK122397
EMBL:BC040337 IPI:IPI00330193 RefSeq:NP_852065.2 UniGene:Mm.285968
ProteinModelPortal:Q8CGF6 SMR:Q8CGF6 DIP:DIP-58945N
PhosphoSite:Q8CGF6 PaxDb:Q8CGF6 PRIDE:Q8CGF6
Ensembl:ENSMUST00000051145 GeneID:99512 KEGG:mmu:99512
InParanoid:A2AGC7 OMA:RVCAYPD OrthoDB:EOG4640B8 NextBio:353995
Bgee:Q8CGF6 CleanEx:MM_WDR47 Genevestigator:Q8CGF6
GermOnline:ENSMUSG00000040389 Uniprot:Q8CGF6
Length = 920
Score = 295 (108.9 bits), Expect = 6.3e-25, P = 6.3e-25
Identities = 50/87 (57%), Positives = 62/87 (71%)
Query: 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWG 60
MHDGT+RD+ F+E + ++LIS GAGDC IY TDC GQ ALSGH+GH+L+LY W
Sbjct: 707 MHDGTIRDLAFMEGPESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILALYTWS 766
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
G + SGS D+TVRFWDLR C V+
Sbjct: 767 GWMIASGSQDKTVRFWDLRVPSCVRVV 793
>WB|WBGene00019434 [details] [associations]
symbol:nmtn-1 species:6239 "Caenorhabditis elegans"
[GO:0040002 "collagen and cuticulin-based cuticle development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0040002 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00550000074331
EMBL:FO080960 OMA:RVCAYPD RefSeq:NP_491864.2
ProteinModelPortal:H2KZG7 SMR:H2KZG7 IntAct:H2KZG7
EnsemblMetazoa:K06A5.8b.1 EnsemblMetazoa:K06A5.8b.2 GeneID:172355
KEGG:cel:CELE_K06A5.8 CTD:172355 WormBase:K06A5.8b Uniprot:H2KZG7
Length = 942
Score = 266 (98.7 bits), Expect = 8.3e-22, P = 8.3e-22
Identities = 47/90 (52%), Positives = 65/90 (72%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWG- 60
HDGTVRD+ FIE + N+S++L+SGGAG+C + VTDC TGQ Q++ GH+ +L LY W
Sbjct: 725 HDGTVRDLIFIESSINRSTILVSGGAGNCHLNVTDCNTGQLIQSMKGHTAPILGLYTWSQ 784
Query: 61 -GATVLSGSHDRTVRFWDLRTRGCTNVLTP 89
G +S S D+T+RFWDLR + NV++P
Sbjct: 785 AGNQFVSCSQDKTIRFWDLRQQTAVNVISP 814
>DICTYBASE|DDB_G0290687 [details] [associations]
symbol:mhkC "myosin heavy chain kinase C"
species:44689 "Dictyostelium discoideum" [GO:0031037 "myosin II
filament disassembly" evidence=IMP] [GO:0005826 "actomyosin
contractile ring" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IMP] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISS] [GO:0005938 "cell cortex" evidence=IEA;IDA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;ISS;IDA] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;IC] [GO:0045159 "myosin II
binding" evidence=ISS] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0032154 "cleavage furrow"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0290687
GO:GO:0005524 GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GenomeReviews:CM000154_GR
GO:GO:0000910 GO:GO:0005826 GO:GO:0018107 GO:GO:0032154 HSSP:P16649
BRENDA:2.7.11.7 EMBL:AAFI02000166 GO:GO:0031037 GO:GO:0045159
GO:GO:0016905 ProtClustDB:CLSZ2846619 EMBL:AB079663 EMBL:AF079447
RefSeq:XP_635600.1 ProteinModelPortal:Q8MY12
EnsemblProtists:DDB0216199 GeneID:8627781 KEGG:ddi:DDB_G0290687
OMA:NTRSSIL Uniprot:Q8MY12
Length = 780
Score = 142 (55.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 33/86 (38%), Positives = 45/86 (52%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGG 61
H ++ VC + +LL SG + D +IYV + ATG GH G V +LY
Sbjct: 632 HTRAIKSVCAM------GNLLFSG-SNDQQIYVWNLATGTILTNFQGHEGWVKTLYAHNN 684
Query: 62 ATVLSGSHDRTVRFWDLRTRGCTNVL 87
+ SGSHD T+R WDL+T C N +
Sbjct: 685 M-LYSGSHDETIRIWDLKTTRCVNTI 709
>POMBASE|SPBC713.04c [details] [associations]
symbol:SPBC713.04c "U3 snoRNP-associated protein Utp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC713.04c GO:GO:0005829
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0005732 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:NP_595343.1
ProteinModelPortal:Q9C1X1 STRING:Q9C1X1 EnsemblFungi:SPBC713.04c.1
GeneID:2541182 KEGG:spo:SPBC713.04c OrthoDB:EOG4350F7
NextBio:20802294 Uniprot:Q9C1X1
Length = 854
Score = 135 (52.6 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 29/85 (34%), Positives = 49/85 (57%)
Query: 10 CFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGS 68
C D S + ++ +G +I++ TGQ + L+GH G V SL +N G+ + SGS
Sbjct: 429 CIAVDPSGE--IVCAGSQDSFEIFMWSVQTGQLLETLAGHEGPVSSLSFNSSGSLLASGS 486
Query: 69 HDRTVRFWDLRTRGCTNVLTPITVP 93
D+TVR WD+ +R + ++ P+ +P
Sbjct: 487 WDKTVRIWDIFSR--SGIVEPLPIP 509
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 130 (50.8 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 20 SLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLR 79
++L+SGG D ++ V + ATG++ L GH+ V L T +SGS D T+R WDLR
Sbjct: 303 NILVSGGC-DREVRVWNMATGESIYLLRGHTSTVRCLKMSDKNTAISGSRDTTLRIWDLR 361
Query: 80 TRGCTNVL 87
T C +VL
Sbjct: 362 TGTCRSVL 369
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 125 (49.1 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVR 74
S+ S LL+SG + D + V + +TG++ + L GHS +V +N ++SGS D +VR
Sbjct: 123 SSDSRLLVSG-SDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 181
Query: 75 FWDLRTRGCTNVL 87
WD+RT C L
Sbjct: 182 IWDVRTGKCLKTL 194
Score = 100 (40.3 bits), Expect = 0.00013, P = 0.00013
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
N S LI G+ D + + D TG+ + L HS V ++ +N G+ ++S S+D R
Sbjct: 165 NPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 224
Query: 76 WDLRTRGCTNVL 87
WD + C L
Sbjct: 225 WDTASGQCLKTL 236
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 125 (49.1 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 32/84 (38%), Positives = 46/84 (54%)
Query: 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATV 64
+R VCF D L++ GA D I + D +T + + L GH + SL + G +
Sbjct: 258 IRSVCFSPDGK-----LLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRL 312
Query: 65 LSGSHDRTVRFWDLRTRGCTNVLT 88
+SGS DR+VR WDLRT C+ L+
Sbjct: 313 VSGSGDRSVRIWDLRTSQCSLTLS 336
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 125 (49.1 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 32/84 (38%), Positives = 46/84 (54%)
Query: 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATV 64
+R VCF D L++ GA D I + D +T + + L GH + SL + G +
Sbjct: 258 IRSVCFSPDGK-----LLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRL 312
Query: 65 LSGSHDRTVRFWDLRTRGCTNVLT 88
+SGS DR+VR WDLRT C+ L+
Sbjct: 313 VSGSGDRSVRIWDLRTSQCSLTLS 336
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 125 (49.1 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 32/73 (43%), Positives = 41/73 (56%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVL-SGSHDRTVRF 75
+K L S G KI+ T Q +SGH+ V S WGG +L SGSHDRTVR
Sbjct: 247 SKPRLASSSKDGTIKIWDTVSRVCQ--YTMSGHTNSV-SCVKWGGQGLLYSGSHDRTVRV 303
Query: 76 WDLRTRG-CTNVL 87
WD+ ++G C N+L
Sbjct: 304 WDINSQGRCINIL 316
Score = 108 (43.1 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 27/84 (32%), Positives = 41/84 (48%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWG- 60
H T+ F TS++ +++G AGD + DC T L GH VL + +W
Sbjct: 142 HGSTILCSAFAPHTSSR---MVTG-AGDNTARIWDCDTQTPMHTLKGHYNWVLCV-SWSP 196
Query: 61 -GATVLSGSHDRTVRFWDLRTRGC 83
G + +GS D T+R WD ++ C
Sbjct: 197 DGEVIATGSMDNTIRLWDPKSGQC 220
>GENEDB_PFALCIPARUM|PFC0100c [details] [associations]
symbol:PFC0100c "regulatory protein, putative"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 112 (44.5 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 28/69 (40%), Positives = 38/69 (55%)
Query: 21 LLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWG-GATVLSGSHDRTVRFWDLR 79
LL+SGG D + V D T + LSGH+G V+S+ + V+SGS D+ +R WDL
Sbjct: 384 LLMSGGR-DAVVRVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLN 442
Query: 80 TRGCTNVLT 88
C LT
Sbjct: 443 NGKCRISLT 451
Score = 36 (17.7 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 6 VRDVCFIEDTSNK 18
++DVC D +NK
Sbjct: 1 MKDVCVTTDLNNK 13
>UNIPROTKB|O97334 [details] [associations]
symbol:PFC0100c "Regulatory protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 112 (44.5 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 28/69 (40%), Positives = 38/69 (55%)
Query: 21 LLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWG-GATVLSGSHDRTVRFWDLR 79
LL+SGG D + V D T + LSGH+G V+S+ + V+SGS D+ +R WDL
Sbjct: 384 LLMSGGR-DAVVRVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLN 442
Query: 80 TRGCTNVLT 88
C LT
Sbjct: 443 NGKCRISLT 451
Score = 36 (17.7 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 6 VRDVCFIEDTSNK 18
++DVC D +NK
Sbjct: 1 MKDVCVTTDLNNK 13
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 123 (48.4 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 30/87 (34%), Positives = 43/87 (49%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
HD + D CF D + K LI+ + D + AT + L GH G + + +N
Sbjct: 302 HDDEILDSCF--DYTGK---LIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQ 356
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
G +L+GS D+T R WD +T C VL
Sbjct: 357 GNRLLTGSSDKTARIWDAQTGQCLQVL 383
Score = 107 (42.7 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H+G + + F + + + L++G + D + D TGQ Q L GH+ + S +N+
Sbjct: 344 HEGEISKISF----NPQGNRLLTGSS-DKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYK 398
Query: 61 GATVLSGSHDRTVRFW 76
G +++GS D T R W
Sbjct: 399 GDIIITGSKDNTCRIW 414
Score = 107 (42.7 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGAT 63
T VC + N S L++ G+ D + D +G+ L+GHS ++SL +N G
Sbjct: 177 TAEIVCL---SFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNR 233
Query: 64 VLSGSHDRTVRFWDLRT 80
+++GS D TV W+ T
Sbjct: 234 IITGSFDHTVTVWEADT 250
Score = 105 (42.0 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 24/73 (32%), Positives = 36/73 (49%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLS-LYNWGGATVLSGSHDRTVRF 75
N S I G+ D + V + TG+ L GH + S ++NW + +L+GS D+T +
Sbjct: 228 NTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKL 287
Query: 76 WDLRTRGCTNVLT 88
WD C LT
Sbjct: 288 WDAVNGKCVATLT 300
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 123 (48.4 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 30/87 (34%), Positives = 44/87 (50%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
HD + D CF D + K LI+ + D V + T + L GH G + + +N
Sbjct: 302 HDDEILDSCF--DYTGK---LIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQ 356
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
G +L+GS D+T R WD++T C VL
Sbjct: 357 GNRLLTGSSDKTARIWDVQTGQCLQVL 383
Score = 108 (43.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 26 GAGDCKIYVTDCATGQAFQALSGHSGHVLS-LYNWGGATVLSGSHDRTVRFWDLRTRGCT 84
G+ D + V D +TG+ L GH + S L++W + +L+GS D+T WD + C
Sbjct: 237 GSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCV 296
Query: 85 NVLT 88
LT
Sbjct: 297 ATLT 300
Score = 103 (41.3 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H+G + + F + + + L++G + D + D TGQ Q L GH+ + S +N+
Sbjct: 344 HEGEISKISF----NPQGNRLLTGSS-DKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYK 398
Query: 61 GATVLSGSHDRTVRFW 76
G V++GS D + R W
Sbjct: 399 GNIVITGSKDNSCRIW 414
Score = 97 (39.2 bits), Expect = 0.00033, P = 0.00033
Identities = 23/77 (29%), Positives = 39/77 (50%)
Query: 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGAT 63
T VC + N S +++ G+ D + D +G+ L+GH ++SL ++ G
Sbjct: 177 TAEIVCL---SFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDR 233
Query: 64 VLSGSHDRTVRFWDLRT 80
+++GS D TV WD T
Sbjct: 234 IITGSFDHTVVVWDAST 250
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 124 (48.7 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWD 77
SS ++SG +GD + DC TG L GH+ VL++ Y+ GA + +GS D TVR WD
Sbjct: 161 SSTMVSG-SGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWD 219
Query: 78 LR 79
+
Sbjct: 220 AK 221
Score = 95 (38.5 bits), Expect = 0.00074, P = 0.00074
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGA-TVLSGSHDRTVRFWDLRT 80
++ + D + + D + +A LSGH G V + WGG + + SHDRT++ W+ +T
Sbjct: 255 LASASKDSTVRIWDVISKRADIVLSGHKGSVTCV-RWGGTGKIYTSSHDRTIKVWNSQT 312
>UNIPROTKB|F1MPQ0 [details] [associations]
symbol:THOC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IEA] [GO:0000445 "THO complex part of
transcription export complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046784 GO:GO:0000445
GeneTree:ENSGT00390000015278 OMA:MVCGGGP EMBL:DAAA02057322
IPI:IPI00716875 UniGene:Bt.59626 ProteinModelPortal:F1MPQ0
Ensembl:ENSBTAT00000001855 Uniprot:F1MPQ0
Length = 341
Score = 121 (47.7 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 30/65 (46%), Positives = 36/65 (55%)
Query: 18 KSSLLISGGAGDCKIYVTDCATGQAFQALSGHSG--HVLSLYNWGGATVLSGSHDRTVRF 75
K +LLI G GDC+++ D TG AL GH+ H L+L VLSG D VR
Sbjct: 137 KENLLILAG-GDCQLHAMDLETGTFMWALRGHTDYIHCLALRE-RSPEVLSGGEDGAVRL 194
Query: 76 WDLRT 80
WDLRT
Sbjct: 195 WDLRT 199
>UNIPROTKB|Q0VCN2 [details] [associations]
symbol:MORG1 "Mitogen-activated protein kinase organizer 1"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016301 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:DAAA02019387 EMBL:DAAA02019388 EMBL:BC120088 IPI:IPI00687810
RefSeq:NP_001073118.1 UniGene:Bt.64656 Ensembl:ENSBTAT00000008196
GeneID:780845 KEGG:bta:780845 InParanoid:Q0VCN2 NextBio:20924512
Uniprot:Q0VCN2
Length = 315
Score = 120 (47.3 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWD 77
+S L SGG GD + + D A+GQ + GH+G V ++ +N +LSGS D T+R WD
Sbjct: 79 NSSLCSGG-GDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSTIRCWD 137
Query: 78 LRTR 81
R+R
Sbjct: 138 CRSR 141
>MGI|MGI:1915086 [details] [associations]
symbol:Wdr83 "WD repeat domain containing 83" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915086 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:AY365434 EMBL:AK005790 EMBL:AK020654 EMBL:BC005587
EMBL:BC019369 EMBL:BC094624 IPI:IPI00118714 IPI:IPI00407931
IPI:IPI00624217 RefSeq:NP_080675.2 UniGene:Mm.334680
ProteinModelPortal:Q9DAJ4 SMR:Q9DAJ4 STRING:Q9DAJ4
PhosphoSite:Q9DAJ4 PRIDE:Q9DAJ4 Ensembl:ENSMUST00000093357
Ensembl:ENSMUST00000149050 GeneID:67836 KEGG:mmu:67836
UCSC:uc009mph.1 InParanoid:Q9DAJ4 NextBio:325661 Bgee:Q9DAJ4
CleanEx:MM_1500041N16RIK Genevestigator:Q9DAJ4
GermOnline:ENSMUSG00000005150 Uniprot:Q9DAJ4
Length = 315
Score = 120 (47.3 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWD 77
+S L SGG GD + + D ATGQ + GH+G V ++ +N +LSGS D +VR WD
Sbjct: 79 NSHLCSGG-GDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWD 137
Query: 78 LRTR 81
R+R
Sbjct: 138 CRSR 141
>RGD|1306947 [details] [associations]
symbol:Wdr83 "WD repeat domain 83" species:10116 "Rattus
norvegicus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306947 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013
GO:GO:0000375 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V EMBL:AY940050 IPI:IPI00209921
RefSeq:NP_001041312.1 UniGene:Rn.3570 ProteinModelPortal:Q5BLX8
PRIDE:Q5BLX8 GeneID:288924 KEGG:rno:288924 InParanoid:Q5BLX8
NextBio:629000 Genevestigator:Q5BLX8 Uniprot:Q5BLX8
Length = 315
Score = 120 (47.3 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWD 77
+S L SGG GD + + D ATGQ + GH+G V ++ +N +LSGS D +VR WD
Sbjct: 79 NSHLCSGG-GDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWD 137
Query: 78 LRTR 81
R+R
Sbjct: 138 CRSR 141
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 122 (48.0 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 30/87 (34%), Positives = 43/87 (49%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
HD + D CF D + K LI+ + D + AT + L GH G + + +N
Sbjct: 302 HDDEILDSCF--DYTGK---LIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQ 356
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
G +L+GS D+T R WD +T C VL
Sbjct: 357 GNHLLTGSSDKTARIWDAQTGQCLQVL 383
Score = 114 (45.2 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 28/84 (33%), Positives = 41/84 (48%)
Query: 5 TVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGAT 63
T VC + N S L++ G+ D + D G+ L GHS ++SL +N G
Sbjct: 177 TAEIVCL---SFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDR 233
Query: 64 VLSGSHDRTVRFWDLRTRGCTNVL 87
+++GS D TV WD T N+L
Sbjct: 234 IITGSFDHTVVVWDADTGRKVNIL 257
Score = 109 (43.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 25/73 (34%), Positives = 35/73 (47%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
N S I G+ D + V D TG+ L GH + S +NW + +L+GS D+T +
Sbjct: 228 NTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKL 287
Query: 76 WDLRTRGCTNVLT 88
WD C LT
Sbjct: 288 WDATNGKCVATLT 300
Score = 107 (42.7 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 24/76 (31%), Positives = 40/76 (52%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H+G + + F + + + L++G + D + D TGQ Q L GH+ + S +N+
Sbjct: 344 HEGEISKISF----NPQGNHLLTGSS-DKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYK 398
Query: 61 GATVLSGSHDRTVRFW 76
G V++GS D T R W
Sbjct: 399 GNIVITGSKDNTCRIW 414
>DICTYBASE|DDB_G0286735 [details] [associations]
symbol:DDB_G0286735 "C3HC4-type zinc
finger-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 dictyBase:DDB_G0286735 Prosite:PS00518
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000089
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10 KO:K10646
RefSeq:XP_637649.1 ProteinModelPortal:Q54LB2
EnsemblProtists:DDB0187121 GeneID:8625789 KEGG:ddi:DDB_G0286735
InParanoid:Q54LB2 OMA:NTNIMIC ProtClustDB:CLSZ2430092
Uniprot:Q54LB2
Length = 694
Score = 125 (49.1 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGHSG--HVLSLYNWGGATVLSGSHDRTVRFW 76
+ +LISG + D K+ + D T + Q LSGH G H L++ G + SGS D+T+R W
Sbjct: 442 NGMLISGSS-DMKVKIWDLVTLKCKQVLSGHEGIVHTLAVI---GNRLFSGSSDQTIRVW 497
Query: 77 DLRTRGCTNVL 87
DL T C +VL
Sbjct: 498 DLETFECLSVL 508
>UNIPROTKB|I3L928 [details] [associations]
symbol:THOC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IEA] [GO:0000445 "THO complex part of
transcription export complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 KO:K13175 GO:GO:0046784
GO:GO:0000445 CTD:79228 GeneTree:ENSGT00390000015278 OMA:MVCGGGP
EMBL:FP312929 RefSeq:NP_001230613.1 UniGene:Ssc.54512
Ensembl:ENSSSCT00000026356 GeneID:100626533 KEGG:ssc:100626533
Uniprot:I3L928
Length = 341
Score = 119 (46.9 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 28/65 (43%), Positives = 39/65 (60%)
Query: 18 KSSLLISGGAGDCKIYVTDCATGQAFQALSGHSG--HVLSLYNWGGATVLSGSHDRTVRF 75
++SL+++GG DC+++ D TG +AL GH+ H L+L VLSG D VR
Sbjct: 138 ENSLILAGG--DCQLHTMDLETGAFTRALRGHTDYIHCLALRE-RSPEVLSGGEDGAVRL 194
Query: 76 WDLRT 80
WDLRT
Sbjct: 195 WDLRT 199
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 124 (48.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 29/70 (41%), Positives = 41/70 (58%)
Query: 12 IEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHD 70
+E SN +++ G+ D + + D ATG Q L GHSG VLS+ ++ G + SGS D
Sbjct: 699 LEGHSNSVWAVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFD 758
Query: 71 RTVRFWDLRT 80
+TVR WD T
Sbjct: 759 KTVRLWDPAT 768
Score = 113 (44.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 31/80 (38%), Positives = 41/80 (51%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H VR V F D L++ G+ D + + D ATG Q L GHS V S+ ++
Sbjct: 778 HSNWVRSVAFSPD-----GRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPD 832
Query: 61 GATVLSGSHDRTVRFWDLRT 80
G + SGS D+TVR WD T
Sbjct: 833 GRLLASGSFDKTVRLWDPAT 852
Score = 113 (44.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 31/80 (38%), Positives = 41/80 (51%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G V V F D L++ G+ D + + D ATG Q L GHS V S+ ++
Sbjct: 736 HSGWVLSVAFSPD-----GRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPD 790
Query: 61 GATVLSGSHDRTVRFWDLRT 80
G + SGS D+TVR WD T
Sbjct: 791 GRLLASGSFDKTVRLWDPAT 810
>UNIPROTKB|F1SEX9 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 KO:K13124 OMA:CKQGAVR
EMBL:CU856041 RefSeq:XP_003123369.1 Ensembl:ENSSSCT00000014996
GeneID:100519823 KEGG:ssc:100519823 Uniprot:F1SEX9
Length = 311
Score = 117 (46.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWD 77
+S L SGG GD + + D A+GQ + GH+G V ++ +N +LSGS D +VR WD
Sbjct: 79 NSSLCSGG-GDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWD 137
Query: 78 LRTR 81
R+R
Sbjct: 138 CRSR 141
>UNIPROTKB|E1BYR9 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:AADN02024429 EMBL:AADN02024430 IPI:IPI00589713
Ensembl:ENSGALT00000002475 Uniprot:E1BYR9
Length = 608
Score = 121 (47.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 32/86 (37%), Positives = 47/86 (54%)
Query: 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGA 62
G+ + IE S S LL + +I+ D + L+GHSG VLS + A
Sbjct: 364 GSNAGITSIEFDSAGSYLLAASNDFASRIWTVD--DNRLRHTLTGHSGKVLSAKFLLDNA 421
Query: 63 TVLSGSHDRTVRFWDLRTRGCTNVLT 88
++SGSHDRT++ WDLR++ C N+ T
Sbjct: 422 RIVSGSHDRTLKLWDLRSKVC-NIKT 446
>CGD|CAL0002484 [details] [associations]
symbol:CDC4 species:5476 "Candida albicans" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IGI] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0043224 "nuclear SCF ubiquitin
ligase complex" evidence=IGI] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IGI] [GO:0000086 "G2/M transition of
mitotic cell cycle" evidence=IGI] [GO:0044182 "filamentous growth
of a population of unicellular organisms" evidence=IMP] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0007126 "meiosis" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0030674 "protein binding, bridging" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0002484
GO:GO:0000086 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000082 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0004842 GO:GO:0042787 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0044182 KO:K03361 GO:GO:0043224
RefSeq:XP_718226.1 RefSeq:XP_718322.1 ProteinModelPortal:Q5A9A6
STRING:Q5A9A6 GeneID:3640007 GeneID:3640125 KEGG:cal:CaO19.10091
KEGG:cal:CaO19.2559 Uniprot:Q5A9A6
Length = 768
Score = 122 (48.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 25/61 (40%), Positives = 37/61 (60%)
Query: 26 GAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRGCTN 85
G D I + TGQ + L GH G V +L + G T+++GS DRTVR W+++T CT+
Sbjct: 425 GVDDKCILIYSTQTGQLMKVLEGHEGGVWAL-KYTGNTLVTGSTDRTVRVWNMKTGQCTH 483
Query: 86 V 86
+
Sbjct: 484 I 484
Score = 99 (39.9 bits), Expect = 0.00045, P = 0.00045
Identities = 22/43 (51%), Positives = 29/43 (67%)
Query: 46 LSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG-CTNVL 87
LSGH+ V S+ +G ++SGS+D TVR WDL G CT+VL
Sbjct: 560 LSGHTQSVRSISGYGNI-IISGSYDSTVRVWDLLDDGHCTHVL 601
>UNIPROTKB|Q5A9A6 [details] [associations]
symbol:CDC4 "Potential ubiquitin ligase F-box subunit"
species:237561 "Candida albicans SC5314" [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IGI] [GO:0000086 "G2/M
transition of mitotic cell cycle" evidence=IGI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IGI] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IGI] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IGI] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0002484
GO:GO:0000086 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000082 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0004842 GO:GO:0042787 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0044182 KO:K03361 GO:GO:0043224
RefSeq:XP_718226.1 RefSeq:XP_718322.1 ProteinModelPortal:Q5A9A6
STRING:Q5A9A6 GeneID:3640007 GeneID:3640125 KEGG:cal:CaO19.10091
KEGG:cal:CaO19.2559 Uniprot:Q5A9A6
Length = 768
Score = 122 (48.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 25/61 (40%), Positives = 37/61 (60%)
Query: 26 GAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRGCTN 85
G D I + TGQ + L GH G V +L + G T+++GS DRTVR W+++T CT+
Sbjct: 425 GVDDKCILIYSTQTGQLMKVLEGHEGGVWAL-KYTGNTLVTGSTDRTVRVWNMKTGQCTH 483
Query: 86 V 86
+
Sbjct: 484 I 484
Score = 99 (39.9 bits), Expect = 0.00045, P = 0.00045
Identities = 22/43 (51%), Positives = 29/43 (67%)
Query: 46 LSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG-CTNVL 87
LSGH+ V S+ +G ++SGS+D TVR WDL G CT+VL
Sbjct: 560 LSGHTQSVRSISGYGNI-IISGSYDSTVRVWDLLDDGHCTHVL 601
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 116 (45.9 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVR 74
S+ S+LL+S + D + + D ++G+ + L GHS +V +N ++SGS D +VR
Sbjct: 70 SSDSNLLVSA-SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 128
Query: 75 FWDLRTRGCTNVL 87
WD++T C L
Sbjct: 129 IWDVKTGKCLKTL 141
Score = 100 (40.3 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
N S LI G+ D + + D TG+ + L HS V ++ +N G+ ++S S+D R
Sbjct: 112 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 171
Query: 76 WDLRTRGCTNVL 87
WD + C L
Sbjct: 172 WDTASGQCLKTL 183
>DICTYBASE|DDB_G0292834 [details] [associations]
symbol:DDB_G0292834 "cyclin-like F-box containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
dictyBase:DDB_G0292834 InterPro:IPR001480 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
EMBL:AAFI02000197 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 PROSITE:PS50927 RefSeq:XP_629376.1
ProteinModelPortal:Q54CP0 STRING:Q54CP0 EnsemblProtists:DDB0237860
GeneID:8628894 KEGG:ddi:DDB_G0292834 OMA:HNEGIRA Uniprot:Q54CP0
Length = 569
Score = 120 (47.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 28/69 (40%), Positives = 44/69 (63%)
Query: 20 SLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLR 79
++L+SGG+ D + V D T Q Q LSGH+ + +L + G +++GS D TVR WDLR
Sbjct: 430 NILMSGGS-DRVVRVWDLNTSQPIQILSGHNEGIRAL-QFNGNVLVTGSDDTTVRVWDLR 487
Query: 80 TRGCTNVLT 88
++ +N+ T
Sbjct: 488 SKN-SNIST 495
Score = 98 (39.6 bits), Expect = 0.00040, P = 0.00040
Identities = 21/60 (35%), Positives = 38/60 (63%)
Query: 20 SLLISGGAGDCKIYVTDCATGQA-FQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDL 78
++L++G + D + V D + + L GH+G V L W G T+++GS+D++VR+W+L
Sbjct: 470 NVLVTG-SDDTTVRVWDLRSKNSNISTLRGHNGSVRCL-QWDGTTLITGSNDQSVRWWNL 527
>UNIPROTKB|G4MWF1 [details] [associations]
symbol:MGG_08345 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 EMBL:CM001232
KO:K03361 RefSeq:XP_003715718.1 EnsemblFungi:MGG_08345T0
GeneID:2678612 KEGG:mgr:MGG_08345 Uniprot:G4MWF1
Length = 1033
Score = 123 (48.4 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 28/61 (45%), Positives = 37/61 (60%)
Query: 26 GAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRGCTN 85
G+ D I+V D TG+ Q L GH G V +L + G T++SGS DR+VR WD+ CT
Sbjct: 670 GSDDQLIHVYDTNTGKLRQKLEGHEGGVWAL-QYEGNTLVSGSTDRSVRVWDIEKGLCTQ 728
Query: 86 V 86
V
Sbjct: 729 V 729
Score = 98 (39.6 bits), Expect = 0.00082, P = 0.00082
Identities = 26/73 (35%), Positives = 35/73 (47%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLY-NWGGATVLSGSHDRTVR 74
S + L+SG DC + V +TG+ L GHS V S+ + +SGS D V+
Sbjct: 817 SAHADTLVSGSY-DCSVRVWRISTGEQLHWLQGHSQKVYSVVLDHKRNRCISGSMDSLVK 875
Query: 75 FWDLRTRGCTNVL 87
WDL T C L
Sbjct: 876 IWDLETGACLYTL 888
>UNIPROTKB|E2RRL3 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 CTD:84292 KO:K13124
OMA:CKQGAVR EMBL:AAEX03012407 RefSeq:XP_542047.1
ProteinModelPortal:E2RRL3 Ensembl:ENSCAFT00000027316 GeneID:484931
KEGG:cfa:484931 NextBio:20858998 Uniprot:E2RRL3
Length = 315
Score = 116 (45.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWD 77
+S L SGG GD + + D A+GQ + GH+G V ++ +N +LSGS D ++R WD
Sbjct: 79 NSSLCSGG-GDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWD 137
Query: 78 LRTR 81
R+R
Sbjct: 138 CRSR 141
>UNIPROTKB|Q9BRX9 [details] [associations]
symbol:WDR83 "WD repeat domain-containing protein 83"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA] [GO:0000375 "RNA
splicing, via transesterification reactions" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471106 GO:GO:0000398 GO:GO:0071013 UniGene:Hs.657204
HOGENOM:HOG000091642 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V OMA:CKQGAVR EMBL:AK223195 EMBL:AK314164
EMBL:BC005870 IPI:IPI00031581 RefSeq:NP_001093207.1
RefSeq:NP_115708.1 ProteinModelPortal:Q9BRX9 SMR:Q9BRX9
STRING:Q9BRX9 PhosphoSite:Q9BRX9 DMDM:74761224 PRIDE:Q9BRX9
DNASU:84292 Ensembl:ENST00000242796 Ensembl:ENST00000418543
GeneID:84292 KEGG:hsa:84292 UCSC:uc002mue.4 GeneCards:GC19P012777
HGNC:HGNC:32672 HPA:HPA042629 HPA:HPA042838 neXtProt:NX_Q9BRX9
PharmGKB:PA165394765 InParanoid:Q9BRX9 PhylomeDB:Q9BRX9
ChiTaRS:WDR83 GenomeRNAi:84292 NextBio:73931 ArrayExpress:Q9BRX9
Bgee:Q9BRX9 Genevestigator:Q9BRX9 GermOnline:ENSG00000123154
Uniprot:Q9BRX9
Length = 315
Score = 116 (45.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWD 77
+S L SGG GD + + D A+GQ + GH+G V ++ +N +LSGS D ++R WD
Sbjct: 79 NSSLCSGG-GDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWD 137
Query: 78 LRTR 81
R+R
Sbjct: 138 CRSR 141
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 121 (47.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 32/84 (38%), Positives = 42/84 (50%)
Query: 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATV 64
+R VCF D ++ GA D I + D + L GH + SL Y G +
Sbjct: 446 IRSVCFSPDGK-----FLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKL 500
Query: 65 LSGSHDRTVRFWDLRTRGCTNVLT 88
+SGS DRTVR WDLRT C+ L+
Sbjct: 501 VSGSGDRTVRIWDLRTGQCSLTLS 524
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 116 (45.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVR 74
S+ S+LL+S + D + + D ++G+ + L GHS +V +N ++SGS D +VR
Sbjct: 96 SSDSNLLVSA-SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154
Query: 75 FWDLRTRGCTNVL 87
WD++T C L
Sbjct: 155 IWDVKTGKCLKTL 167
Score = 100 (40.3 bits), Expect = 0.00011, P = 0.00011
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
N S LI G+ D + + D TG+ + L HS V ++ +N G+ ++S S+D R
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 76 WDLRTRGCTNVL 87
WD + C L
Sbjct: 198 WDTASGQCLKTL 209
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 116 (45.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVR 74
S+ S+LL+S + D + + D ++G+ + L GHS +V +N ++SGS D +VR
Sbjct: 96 SSDSNLLVSA-SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154
Query: 75 FWDLRTRGCTNVL 87
WD++T C L
Sbjct: 155 IWDVKTGKCLKTL 167
Score = 100 (40.3 bits), Expect = 0.00011, P = 0.00011
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
N S LI G+ D + + D TG+ + L HS V ++ +N G+ ++S S+D R
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 76 WDLRTRGCTNVL 87
WD + C L
Sbjct: 198 WDTASGQCLKTL 209
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 116 (45.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVR 74
S+ S+LL+S + D + + D ++G+ + L GHS +V +N ++SGS D +VR
Sbjct: 96 SSDSNLLVSA-SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154
Query: 75 FWDLRTRGCTNVL 87
WD++T C L
Sbjct: 155 IWDVKTGKCLKTL 167
Score = 100 (40.3 bits), Expect = 0.00011, P = 0.00011
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
N S LI G+ D + + D TG+ + L HS V ++ +N G+ ++S S+D R
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 76 WDLRTRGCTNVL 87
WD + C L
Sbjct: 198 WDTASGQCLKTL 209
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 116 (45.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVR 74
S+ S+LL+S + D + + D ++G+ + L GHS +V +N ++SGS D +VR
Sbjct: 96 SSDSNLLVSA-SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154
Query: 75 FWDLRTRGCTNVL 87
WD++T C L
Sbjct: 155 IWDVKTGKCLKTL 167
Score = 100 (40.3 bits), Expect = 0.00011, P = 0.00011
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
N S LI G+ D + + D TG+ + L HS V ++ +N G+ ++S S+D R
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 76 WDLRTRGCTNVL 87
WD + C L
Sbjct: 198 WDTASGQCLKTL 209
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 116 (45.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVR 74
S+ S+LL+S + D + + D ++G+ + L GHS +V +N ++SGS D +VR
Sbjct: 96 SSDSNLLVSA-SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154
Query: 75 FWDLRTRGCTNVL 87
WD++T C L
Sbjct: 155 IWDVKTGKCLKTL 167
Score = 100 (40.3 bits), Expect = 0.00011, P = 0.00011
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
N S LI G+ D + + D TG+ + L HS V ++ +N G+ ++S S+D R
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 76 WDLRTRGCTNVL 87
WD + C L
Sbjct: 198 WDTASGQCLKTL 209
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 116 (45.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVR 74
S+ S+LL+S + D + + D ++G+ + L GHS +V +N ++SGS D +VR
Sbjct: 96 SSDSNLLVSA-SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154
Query: 75 FWDLRTRGCTNVL 87
WD++T C L
Sbjct: 155 IWDVKTGKCLKTL 167
Score = 100 (40.3 bits), Expect = 0.00011, P = 0.00011
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
N S LI G+ D + + D TG+ + L HS V ++ +N G+ ++S S+D R
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 76 WDLRTRGCTNVL 87
WD + C L
Sbjct: 198 WDTASGQCLKTL 209
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 116 (45.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 27/73 (36%), Positives = 39/73 (53%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
N S LI G+ D + + D TG+ + +S HS V + +N G V+SGS+D TVR
Sbjct: 139 NPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRI 198
Query: 76 WDLRTRGCTNVLT 88
WD T N ++
Sbjct: 199 WDTTTGQLLNTIS 211
Score = 113 (44.8 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 27/93 (29%), Positives = 46/93 (49%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H + D+ + +D S LI + D I + D +G+ + L GH +V + +N
Sbjct: 87 HKEGISDIAWSQD-----SKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQ 141
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLTPITVP 93
++SGS D VR WD+ T CT +++ + P
Sbjct: 142 SNLIVSGSFDENVRIWDVNTGECTKMISAHSDP 174
>TAIR|locus:2035449 [details] [associations]
symbol:AT1G19750 "AT1G19750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISS] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 KO:K10570
GO:GO:0080008 IPI:IPI00537626 RefSeq:NP_173405.2 UniGene:At.51683
ProteinModelPortal:F4HQX6 SMR:F4HQX6 EnsemblPlants:AT1G19750.1
GeneID:838564 KEGG:ath:AT1G19750 OMA:NEHALAT ArrayExpress:F4HQX6
Uniprot:F4HQX6
Length = 450
Score = 118 (46.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGAT--VL-SGSHDRTVRF 75
S LI+ G D ++ + D A+G LSGH V+S+ W ++ VL +G D +RF
Sbjct: 159 SHTLIAAGTDDVQVRLCDIASGAFSHTLSGHRDGVMSV-EWSTSSEWVLYTGGCDGAIRF 217
Query: 76 WDLRTRGCTNVL 87
WD+R GC VL
Sbjct: 218 WDIRRAGCFRVL 229
>TAIR|locus:2029815 [details] [associations]
symbol:ATCSA-1 "AT1G27840" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0006281 "DNA repair" evidence=IMP] [GO:0010224
"response to UV-B" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006281 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010224 KO:K10570 GO:GO:0080008 OMA:TMLRGHY UniGene:At.51683
IPI:IPI00657564 RefSeq:NP_001031099.1 UniGene:At.17206
ProteinModelPortal:F4HUT3 SMR:F4HUT3 EnsemblPlants:AT1G27840.3
GeneID:839677 KEGG:ath:AT1G27840 PhylomeDB:F4HUT3 Uniprot:F4HUT3
Length = 451
Score = 117 (46.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGAT--VL-SGSHDRTVRF 75
S LI+ G D ++ + D A+G LSGH V+S+ W ++ VL +G D +RF
Sbjct: 159 SHTLIAAGTEDVQVRLCDIASGAFSHTLSGHRDGVMSV-EWSTSSEWVLYTGGCDGAIRF 217
Query: 76 WDLRTRGCTNVL 87
WD+R GC VL
Sbjct: 218 WDIRRAGCFRVL 229
>UNIPROTKB|Q86W42 [details] [associations]
symbol:THOC6 "THO complex subunit 6 homolog" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IDA] [GO:0000445 "THO complex part of transcription export
complex" evidence=IDA] [GO:0000347 "THO complex" evidence=IDA]
[GO:0046784 "intronless viral mRNA export from host nucleus"
evidence=IDA] [GO:0006406 "mRNA export from nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006397 GO:GO:0003723
KO:K13175 GO:GO:0046784 GO:GO:0000445 CTD:79228
HOGENOM:HOG000008085 HOVERGEN:HBG079643 EMBL:AK075330 EMBL:AK314086
EMBL:BC003118 EMBL:BC050674 IPI:IPI00301252 IPI:IPI00328985
IPI:IPI00641826 RefSeq:NP_001135822.1 RefSeq:NP_077315.2
UniGene:Hs.412304 ProteinModelPortal:Q86W42 SMR:Q86W42
IntAct:Q86W42 STRING:Q86W42 PhosphoSite:Q86W42 DMDM:74759455
PaxDb:Q86W42 PRIDE:Q86W42 DNASU:79228 Ensembl:ENST00000253952
Ensembl:ENST00000326266 Ensembl:ENST00000574549
Ensembl:ENST00000575576 GeneID:79228 KEGG:hsa:79228 UCSC:uc002cta.2
UCSC:uc002ctd.2 GeneCards:GC16P003081 H-InvDB:HIX0012753
HGNC:HGNC:28369 neXtProt:NX_Q86W42 PharmGKB:PA142670592
InParanoid:Q86W42 OMA:MVCGGGP PhylomeDB:Q86W42 GenomeRNAi:79228
NextBio:68204 Bgee:Q86W42 CleanEx:HS_THOC6 Genevestigator:Q86W42
GermOnline:ENSG00000131652 Uniprot:Q86W42
Length = 341
Score = 115 (45.5 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 18 KSSLLISGGAGDCKIYVTDCATGQAFQALSGHSG--HVLSLYNWGGATVLSGSHDRTVRF 75
++SL+++GG DC+++ D TG + L GH+ H L+L VLSG D VR
Sbjct: 138 ENSLILAGG--DCQLHTMDLETGTFTRVLRGHTDYIHCLALRE-RSPEVLSGGEDGAVRL 194
Query: 76 WDLRT 80
WDLRT
Sbjct: 195 WDLRT 199
>RGD|708553 [details] [associations]
symbol:Thoc6 "THO complex 6 homolog (Drosophila)" species:10116
"Rattus norvegicus" [GO:0000346 "transcription export complex"
evidence=ISO] [GO:0000347 "THO complex" evidence=ISO] [GO:0000445
"THO complex part of transcription export complex"
evidence=IEA;ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:708553 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0006397 GO:GO:0003723 KO:K13175 GO:GO:0046784 GO:GO:0000445
CTD:79228 HOGENOM:HOG000008085 HOVERGEN:HBG079643 OrthoDB:EOG42V8GK
GeneTree:ENSGT00390000015278 OMA:MVCGGGP EMBL:BC079149
IPI:IPI00201096 RefSeq:NP_077360.2 UniGene:Rn.42184
ProteinModelPortal:Q6AY87 PRIDE:Q6AY87 Ensembl:ENSRNOT00000004672
GeneID:79227 KEGG:rno:79227 UCSC:RGD:708553 InParanoid:Q6AY87
NextBio:614660 Genevestigator:Q6AY87 GermOnline:ENSRNOG00000003497
Uniprot:Q6AY87
Length = 341
Score = 114 (45.2 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 27/64 (42%), Positives = 38/64 (59%)
Query: 18 KSSLLISGGAGDCKIYVTDCATGQAFQALSGHSG--HVLSLYNWGGATVLSGSHDRTVRF 75
++SL+++GG DC+++ D TG +AL GH+ H L+L VLSG D VR
Sbjct: 138 ENSLILAGG--DCQLHTMDLETGTFTRALRGHTDYIHCLALRE-RSPEVLSGGEDGAVRL 194
Query: 76 WDLR 79
WDLR
Sbjct: 195 WDLR 198
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 114 (45.2 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTR 81
++ G+ D I + D + G LSGH V L ++ GG ++S S D+T+R WDLR +
Sbjct: 312 LASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNK 371
Query: 82 GCTNVL 87
C L
Sbjct: 372 RCMKTL 377
Score = 95 (38.5 bits), Expect = 0.00053, P = 0.00053
Identities = 30/89 (33%), Positives = 43/89 (48%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG-QAFQALSGHSGHVLSL-YNW 59
H +V+DV F D K LL S A D I + D + + + GH +V S+ +
Sbjct: 149 HTDSVQDVAF--DAQGK--LLASCSA-DLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVP 203
Query: 60 GGATVLSGSHDRTVRFWDLRTRGCTNVLT 88
G VLS S DRT++ W++ T C T
Sbjct: 204 AGDYVLSASRDRTIKMWEVATGYCVKTYT 232
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 112 (44.5 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 27/87 (31%), Positives = 43/87 (49%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H+ + DV F D + ++S + D + + D TG + L GH+ + + +N
Sbjct: 70 HENGISDVAFSSD----ARFIVSA-SDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQ 124
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
++SGS D TVR WD+ T C VL
Sbjct: 125 SNMIVSGSFDETVRIWDVTTGKCLKVL 151
Score = 102 (41.0 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
N S +I G+ D + + D TG+ + L HS V ++ +N G+ ++S S+D R
Sbjct: 122 NPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRI 181
Query: 76 WDLRTRGCTNVL 87
WD T C L
Sbjct: 182 WDSGTGHCVKTL 193
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 120 (47.3 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 32/80 (40%), Positives = 41/80 (51%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G V V F D L+SG D + + D ATG+ Q L GHSG V SL ++
Sbjct: 749 HLGPVESVVFSPDGKQ----LVSGSYDDT-VKIWDPATGELLQTLDGHSGTVESLAFSPD 803
Query: 61 GATVLSGSHDRTVRFWDLRT 80
G + SGS+D T+ WD T
Sbjct: 804 GKLLASGSYDNTIDLWDSAT 823
Score = 107 (42.7 bits), Expect = 0.00012, P = 0.00012
Identities = 27/80 (33%), Positives = 39/80 (48%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H GTV + F D L++ G+ D I + D ATG+ Q GH + S+ +
Sbjct: 791 HSGTVESLAFSPDGK-----LLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPD 845
Query: 61 GATVLSGSHDRTVRFWDLRT 80
G + S S D T++ WDL T
Sbjct: 846 GKELASASDDSTIKIWDLAT 865
Score = 104 (41.7 bits), Expect = 0.00026, P = 0.00026
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80
++ G D I + D ATG+ Q L GHS + S+ ++ G + SGS+D+T + WD T
Sbjct: 1143 LASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPAT 1201
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 112 (44.5 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 25/81 (30%), Positives = 43/81 (53%)
Query: 8 DVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLS 66
D F D + S+L++SG D + + + TG+ + LS HS + ++ +N G+ ++S
Sbjct: 124 DFVFCCDFNPPSNLIVSGSF-DESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVS 182
Query: 67 GSHDRTVRFWDLRTRGCTNVL 87
GS+D R WD + C L
Sbjct: 183 GSYDGLCRIWDAASGQCLRTL 203
Score = 104 (41.7 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 28/93 (30%), Positives = 46/93 (49%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H + DV + D SS L+S + D + V D +G+ + L GHS V +N
Sbjct: 80 HSLEISDVAWSSD----SSRLVSA-SDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPP 134
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLTPITVP 93
++SGS D +V+ W+++T C L+ + P
Sbjct: 135 SNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDP 167
>TAIR|locus:2028481 [details] [associations]
symbol:SCD1 "STOMATAL CYTOKINESIS-DEFECTIVE 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA;IMP] [GO:0009825 "multidimensional cell growth"
evidence=IMP] [GO:0010052 "guard cell differentiation"
evidence=IMP] [GO:0010235 "guard mother cell cytokinesis"
evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0009825 HSSP:P16649 GO:GO:0080008 InterPro:IPR005112
InterPro:IPR001194 InterPro:IPR005113 Pfam:PF03455 Pfam:PF02141
Pfam:PF03456 SMART:SM00801 SMART:SM00799 SMART:SM00800
PROSITE:PS50947 PROSITE:PS50211 PROSITE:PS50946 EMBL:AY082605
IPI:IPI00522154 RefSeq:NP_850959.1 UniGene:At.38309
ProteinModelPortal:Q8RXA7 SMR:Q8RXA7 PaxDb:Q8RXA7 PRIDE:Q8RXA7
EnsemblPlants:AT1G49040.1 GeneID:841327 KEGG:ath:AT1G49040
TAIR:At1g49040 HOGENOM:HOG000029412 InParanoid:Q8RXA7 OMA:YRNFIEN
PhylomeDB:Q8RXA7 ProtClustDB:CLSN2680426 Genevestigator:Q8RXA7
GO:GO:0010235 Uniprot:Q8RXA7
Length = 1187
Score = 119 (46.9 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGG 61
H GTVR + +S++ ++ G+ D + V D T Q + L GH V + G
Sbjct: 898 HTGTVRAI-----SSDRGKIV--SGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKMLSG 950
Query: 62 ATVLSGSHDRTVRFWDLRTRGC 83
VL+ +HD TV+ WD+RT C
Sbjct: 951 ERVLTAAHDGTVKMWDVRTDMC 972
Score = 98 (39.6 bits), Expect = 0.00096, P = 0.00096
Identities = 27/82 (32%), Positives = 43/82 (52%)
Query: 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT-GQAFQA-LSGHSGHVLSLYN 58
+H T R+VC + + ISG DC + + D + G +A L GH+G V ++ +
Sbjct: 849 LHSVTRREVCDLVGDREDAGFFISGST-DCLVKIWDPSLRGSELRATLKGHTGTVRAISS 907
Query: 59 WGGATVLSGSHDRTVRFWDLRT 80
G ++SGS D +V WD +T
Sbjct: 908 DRGK-IVSGSDDLSVIVWDKQT 928
>MGI|MGI:2677480 [details] [associations]
symbol:Thoc6 "THO complex 6 homolog (Drosophila)"
species:10090 "Mus musculus" [GO:0000346 "transcription export
complex" evidence=ISO] [GO:0000347 "THO complex" evidence=ISO]
[GO:0000445 "THO complex part of transcription export complex"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006406 "mRNA export from nucleus"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0046784 "intronless viral mRNA
export from host nucleus" evidence=ISO] [GO:0051028 "mRNA
transport" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2677480 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0006397 GO:GO:0003723 KO:K13175 GO:GO:0046784 GO:GO:0000445
CTD:79228 HOGENOM:HOG000008085 HOVERGEN:HBG079643 OrthoDB:EOG42V8GK
GeneTree:ENSGT00390000015278 OMA:MVCGGGP EMBL:BC085131
EMBL:BC089551 IPI:IPI00123949 RefSeq:NP_001008425.1
UniGene:Mm.328831 ProteinModelPortal:Q5U4D9 SMR:Q5U4D9
IntAct:Q5U4D9 PhosphoSite:Q5U4D9 REPRODUCTION-2DPAGE:IPI00123949
PaxDb:Q5U4D9 PRIDE:Q5U4D9 Ensembl:ENSMUST00000047436
Ensembl:ENSMUST00000095579 GeneID:386612 KEGG:mmu:386612
UCSC:uc008ass.1 InParanoid:Q5U4D9 NextBio:405543 Bgee:Q5U4D9
CleanEx:MM_THOC6 Genevestigator:Q5U4D9
GermOnline:ENSMUSG00000041319 Uniprot:Q5U4D9
Length = 341
Score = 112 (44.5 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 27/64 (42%), Positives = 38/64 (59%)
Query: 18 KSSLLISGGAGDCKIYVTDCATGQAFQALSGHSG--HVLSLYNWGGATVLSGSHDRTVRF 75
++SL+++GG DC+++ D TG +AL GH+ H L+L VLSG D VR
Sbjct: 138 ENSLILAGG--DCQLHSMDLETGAFTRALRGHTDYIHCLALRE-RSPEVLSGGEDGAVRL 194
Query: 76 WDLR 79
WDLR
Sbjct: 195 WDLR 198
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 113 (44.8 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGD--CKIYVTDCATGQAFQALSGHSGHVLSL-YN 58
H+ V DVCF N + LI+ + D +++ TD T Q L GH G + + +N
Sbjct: 302 HNDEVLDVCF-----NYTGQLIATASADGTSRVFSTD--TFQCLCQLEGHKGEISKVCFN 354
Query: 59 WGGATVLSGSHDRTVRFWDLRTRGCTNVL 87
G+ VL+ S D+T R W ++T C VL
Sbjct: 355 AQGSRVLTASVDKTSRVWCVKTGACLQVL 383
Score = 103 (41.3 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G + VCF + S +L + +++ TG Q L GHS + S +N+
Sbjct: 344 HKGEISKVCF---NAQGSRVLTASVDKTSRVWCVK--TGACLQVLEGHSDEIFSCAFNYE 398
Query: 61 GATVLSGSHDRTVRFW 76
G T+++GS D T R W
Sbjct: 399 GDTIITGSKDNTCRIW 414
Score = 98 (39.6 bits), Expect = 0.00026, P = 0.00026
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
N S L++ G+ D + D +G+ L+GH ++SL +N G +++GS D T
Sbjct: 186 NPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAIL 245
Query: 76 WDLRTRGCTNVLT 88
WD+ + +VL+
Sbjct: 246 WDVPSGRKVHVLS 258
>UNIPROTKB|G4NDD2 [details] [associations]
symbol:MGG_00946 "Poly(A)+ RNA export protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 EMBL:CM001235 GO:GO:0005643 GO:GO:0016973 KO:K14298
GO:GO:0031081 GO:GO:0000973 GO:GO:2000728 RefSeq:XP_003718005.1
ProteinModelPortal:G4NDD2 EnsemblFungi:MGG_00946T0 GeneID:2674766
KEGG:mgr:MGG_00946 Uniprot:G4NDD2
Length = 358
Score = 112 (44.5 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 32/81 (39%), Positives = 46/81 (56%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLY---N 58
HDG V V + +D + ++SGGA D + V D TGQ Q ++ H V S+ N
Sbjct: 78 HDGPVFSVDYYKDGTK----IVSGGA-DKQAKVCDMNTGQTAQ-VAQHEKPVRSVRWFDN 131
Query: 59 WGGATVLSGSHDRTVRFWDLR 79
G V++GS D+TV++WDLR
Sbjct: 132 NGSPMVITGSWDKTVKYWDLR 152
>UNIPROTKB|F1SM42 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:FP102656 Ensembl:ENSSSCT00000017750 Uniprot:F1SM42
Length = 596
Score = 115 (45.5 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGA 62
G+ + IE S S LL + +I+ D + L+GHSG VLS + A
Sbjct: 364 GSNAGITSIEFDSAGSYLLAASNDFASRIWTVD--DYRLRHTLTGHSGKVLSAKFLLDNA 421
Query: 63 TVLSGSHDRTVRFWDLRTRGC 83
++SGSHDRT++ WDLR++ C
Sbjct: 422 RIVSGSHDRTLKLWDLRSKVC 442
>UNIPROTKB|E2R5F8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 CTD:55054 GO:GO:0000421 InterPro:IPR013923
Pfam:PF08614 OMA:LETECQE EMBL:AAEX03014453 RefSeq:XP_850664.1
ProteinModelPortal:E2R5F8 Ensembl:ENSCAFT00000018720 GeneID:477412
KEGG:cfa:477412 NextBio:20852897 Uniprot:E2R5F8
Length = 607
Score = 115 (45.5 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGA 62
G+ + IE S S LL + +I+ D + L+GHSG VLS + A
Sbjct: 364 GSNAGITSIEFDSAGSYLLAASNDFASRIWTVD--DYRLRHTLTGHSGKVLSAKFLLDNA 421
Query: 63 TVLSGSHDRTVRFWDLRTRGC 83
++SGSHDRT++ WDLR++ C
Sbjct: 422 RIVSGSHDRTLKLWDLRSKVC 442
>UNIPROTKB|Q676U5 [details] [associations]
symbol:ATG16L1 "Autophagy-related protein 16-1"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] [GO:0034045 "pre-autophagosomal structure membrane"
evidence=IEA] [GO:0005776 "autophagic vacuole" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=NAS] [GO:0000045
"autophagic vacuole assembly" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 EMBL:CH471063 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AY398617 EMBL:EF079889
EMBL:EF079890 EMBL:AY358182 EMBL:AK026330 EMBL:AK027854
EMBL:AK123876 EMBL:AC013726 EMBL:BC071846 EMBL:AL834526
IPI:IPI00432751 IPI:IPI00446614 IPI:IPI00470446 IPI:IPI00555905
IPI:IPI00797150 RefSeq:NP_001177195.1 RefSeq:NP_001177196.1
RefSeq:NP_060444.3 RefSeq:NP_110430.5 RefSeq:NP_942593.2
UniGene:Hs.529322 PDB:4GDK PDB:4GDL PDBsum:4GDK PDBsum:4GDL
ProteinModelPortal:Q676U5 SMR:Q676U5 DIP:DIP-27552N IntAct:Q676U5
MINT:MINT-1141152 STRING:Q676U5 PhosphoSite:Q676U5 DMDM:62510482
PaxDb:Q676U5 PRIDE:Q676U5 DNASU:55054 Ensembl:ENST00000347464
Ensembl:ENST00000373525 Ensembl:ENST00000392017
Ensembl:ENST00000392020 GeneID:55054 KEGG:hsa:55054 UCSC:uc002vty.3
UCSC:uc002vtz.3 UCSC:uc002vua.3 CTD:55054 GeneCards:GC02P234118
HGNC:HGNC:21498 HPA:HPA012577 MIM:610767 MIM:611081
neXtProt:NX_Q676U5 Orphanet:206 PharmGKB:PA134902949
HOGENOM:HOG000112569 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8
GenomeRNAi:55054 NextBio:58531 ArrayExpress:Q676U5 Bgee:Q676U5
CleanEx:HS_ATG16L1 Genevestigator:Q676U5 GermOnline:ENSG00000085978
GO:GO:0005776 GO:GO:0000421 GO:GO:0034045 GO:GO:0000045
GO:GO:0051260 InterPro:IPR013923 Pfam:PF08614 Uniprot:Q676U5
Length = 607
Score = 115 (45.5 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGA 62
G+ + IE S S LL + +I+ D + L+GHSG VLS + A
Sbjct: 364 GSNAGITSIEFDSAGSYLLAASNDFASRIWTVD--DYRLRHTLTGHSGKVLSAKFLLDNA 421
Query: 63 TVLSGSHDRTVRFWDLRTRGC 83
++SGSHDRT++ WDLR++ C
Sbjct: 422 RIVSGSHDRTLKLWDLRSKVC 442
>UNIPROTKB|E1BGS8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:DAAA02009276 IPI:IPI00699437
ProteinModelPortal:E1BGS8 Ensembl:ENSBTAT00000005131 Uniprot:E1BGS8
Length = 623
Score = 115 (45.5 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGA 62
G+ + IE S S LL + +I+ D + L+GHSG VLS + A
Sbjct: 380 GSNAGITSIEFDSAGSYLLAASNDFASRIWTVD--DYRLRHTLTGHSGKVLSAKFLLDNA 437
Query: 63 TVLSGSHDRTVRFWDLRTRGC 83
++SGSHDRT++ WDLR++ C
Sbjct: 438 RIVSGSHDRTLKLWDLRSKVC 458
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 110 (43.8 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 27/80 (33%), Positives = 42/80 (52%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H VRDV TS+ + GG D ++Y D +TG+ + GH G V ++ +N
Sbjct: 59 HGREVRDV---HVTSDNAKFCSCGG--DRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDS 113
Query: 61 GATVLSGSHDRTVRFWDLRT 80
+ V+S DR++R WD R+
Sbjct: 114 SSVVVSAGFDRSLRVWDCRS 133
>TAIR|locus:2050064 [details] [associations]
symbol:AT2G21390 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0006886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC006841 GO:GO:0030126 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 ProtClustDB:CLSN2914500
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AK228692 IPI:IPI00534598
PIR:F84600 RefSeq:NP_179734.1 UniGene:At.28070
ProteinModelPortal:Q9SJT9 SMR:Q9SJT9 STRING:Q9SJT9 PaxDb:Q9SJT9
PRIDE:Q9SJT9 EnsemblPlants:AT2G21390.1 GeneID:816678
KEGG:ath:AT2G21390 GeneFarm:3755 TAIR:At2g21390 InParanoid:Q9SJT9
OMA:GMENTDI PhylomeDB:Q9SJT9 Genevestigator:Q9SJT9 Uniprot:Q9SJT9
Length = 1218
Score = 118 (46.6 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 30/88 (34%), Positives = 48/88 (54%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H+G VR V F N L +SGG D KI V + T + L GH ++ ++ ++
Sbjct: 50 HEGPVRGVHF----HNSQPLFVSGG-DDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHE 104
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLT 88
++S S D+T+R W+ ++R C +VLT
Sbjct: 105 NPWIVSASDDQTIRIWNWQSRTCISVLT 132
>ZFIN|ZDB-GENE-070112-342 [details] [associations]
symbol:gnb5a "guanine nucleotide binding protein (G
protein), beta 5a" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 ZFIN:ZDB-GENE-070112-342 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
OMA:ATDGLHE OrthoDB:EOG4XWFXZ EMBL:AL954697 EMBL:BC129375
IPI:IPI00512905 RefSeq:NP_001073650.1 UniGene:Dr.108630 SMR:A1L271
Ensembl:ENSDART00000027720 GeneID:562813 KEGG:dre:562813 CTD:562813
InParanoid:A1L271 NextBio:20884602 Uniprot:A1L271
Length = 355
Score = 111 (44.1 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 29/86 (33%), Positives = 42/86 (48%)
Query: 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLY--- 57
MH + CF T++ +L S G G C ++ D +GQ Q+ GH+ VL L
Sbjct: 153 MHTNYLSACCF---TNSDMQILTSSGDGTCALW--DVESGQMLQSFHGHAADVLCLDLAP 207
Query: 58 NWGGATVLSGSHDRTVRFWDLRTRGC 83
+ G T +SG D+ WD+RT C
Sbjct: 208 SETGNTFVSGGCDKKACVWDMRTGQC 233
Score = 99 (39.9 bits), Expect = 0.00016, P = 0.00016
Identities = 29/78 (37%), Positives = 35/78 (44%)
Query: 4 GTVRDV-CFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGG 61
G DV C S + +SGG D K V D TGQ Q+ H + S+ Y G
Sbjct: 195 GHAADVLCLDLAPSETGNTFVSGGC-DKKACVWDMRTGQCVQSFESHDSDINSVRYYPSG 253
Query: 62 ATVLSGSHDRTVRFWDLR 79
SGS D T R +DLR
Sbjct: 254 DAFASGSDDATCRLYDLR 271
>ASPGD|ASPL0000042645 [details] [associations]
symbol:AN1468 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR027106 PANTHER:PTHR19846
EMBL:AACD01000022 InterPro:IPR014906 Pfam:PF08799
HOGENOM:HOG000157615 KO:K12662 OMA:CKIWDLR OrthoDB:EOG4V1B90
RefSeq:XP_659072.1 ProteinModelPortal:Q5BDB2 SMR:Q5BDB2
STRING:Q5BDB2 EnsemblFungi:CADANIAT00008085 GeneID:2875152
KEGG:ani:AN1468.2 Uniprot:Q5BDB2
Length = 521
Score = 113 (44.8 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 33/81 (40%), Positives = 42/81 (51%)
Query: 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWG 60
+ +G R+V + +N SLL SGG D V D TG+ L GH + L +WG
Sbjct: 329 LQEGHSREVYTVA-FNNDGSLLASGGL-DSIGRVWDLRTGRTVMILEGHIREIFGL-DWG 385
Query: 61 --GATVLSGSHDRTVRFWDLR 79
G VLSGS D V+ WDLR
Sbjct: 386 VDGYRVLSGSGDGWVKCWDLR 406
>UNIPROTKB|C9JIS1 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 HOGENOM:HOG000176356 HGNC:HGNC:4398
IPI:IPI00790896 ProteinModelPortal:C9JIS1 SMR:C9JIS1 STRING:C9JIS1
PRIDE:C9JIS1 Ensembl:ENST00000431068 ArrayExpress:C9JIS1
Bgee:C9JIS1 Uniprot:C9JIS1
Length = 232
Score = 107 (42.7 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 27/83 (32%), Positives = 43/83 (51%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G + F++D + ++ S G C ++ D TGQ +GHSG V+SL
Sbjct: 142 HTGYLSCCRFLDD----NQIITSSGDTTCALW--DIETGQQTVGFAGHSGDVMSLSLAPD 195
Query: 61 GATVLSGSHDRTVRFWDLRTRGC 83
G T +SG+ D +++ WD+R C
Sbjct: 196 GRTFVSGACDASIKLWDVRDSMC 218
>SGD|S000001885 [details] [associations]
symbol:CDC4 "F-box protein required for G1/S and G2/M
transition" species:4932 "Saccharomyces cerevisiae" [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IGI;IMP]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043224 "nuclear SCF
ubiquitin ligase complex" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA;IPI]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IDA] [GO:0007126 "meiosis" evidence=IMP] [GO:0051301 "cell
division" evidence=IEA] [GO:0030435 "sporulation resulting in
formation of a cellular spore" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 SGD:S000001885 GO:GO:0007126 GO:GO:0000086
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0000082 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:D50617 EMBL:BK006940
SUPFAM:SSF81383 GO:GO:0030435 GO:GO:0016363 GO:GO:0042787
GO:GO:0043130 EMBL:Z46255 GeneTree:ENSGT00550000075528
GO:GO:0031146 EMBL:X05625 PIR:S56245 RefSeq:NP_116585.1 PDB:1NEX
PDB:2P63 PDB:3MKS PDB:3V7D PDBsum:1NEX PDBsum:2P63 PDBsum:3MKS
PDBsum:3V7D ProteinModelPortal:P07834 SMR:P07834 DIP:DIP-1625N
IntAct:P07834 MINT:MINT-389524 STRING:P07834 PaxDb:P07834
PRIDE:P07834 EnsemblFungi:YFL009W GeneID:850539 KEGG:sce:YFL009W
CYGD:YFL009w HOGENOM:HOG000111495 KO:K03361 OMA:VVTCLQH
OrthoDB:EOG4B2X5M EvolutionaryTrace:P07834 NextBio:966298
Genevestigator:P07834 GermOnline:YFL009W GO:GO:0043224
Uniprot:P07834
Length = 779
Score = 115 (45.5 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 30/62 (48%), Positives = 35/62 (56%)
Query: 26 GAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCT 84
GA D I V D + LSGH G V +L Y GG V SGS DRTVR WD++ CT
Sbjct: 398 GADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILV-SGSTDRTVRVWDIKKGCCT 456
Query: 85 NV 86
+V
Sbjct: 457 HV 458
>UNIPROTKB|B3KPU1 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246 EMBL:AC009488
HOGENOM:HOG000176356 HOVERGEN:HBG000188 UniGene:Hs.185172
HGNC:HGNC:4398 EMBL:AK056750 IPI:IPI00924758 SMR:B3KPU1
STRING:B3KPU1 Ensembl:ENST00000419828 Ensembl:ENST00000427895
Uniprot:B3KPU1
Length = 240
Score = 107 (42.7 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 27/83 (32%), Positives = 43/83 (51%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G + F++D + ++ S G C ++ D TGQ +GHSG V+SL
Sbjct: 42 HTGYLSCCRFLDD----NQIITSSGDTTCALW--DIETGQQTVGFAGHSGDVMSLSLAPD 95
Query: 61 GATVLSGSHDRTVRFWDLRTRGC 83
G T +SG+ D +++ WD+R C
Sbjct: 96 GRTFVSGACDASIKLWDVRDSMC 118
>ASPGD|ASPL0000054968 [details] [associations]
symbol:AN1387 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0007131
"reciprocal meiotic recombination" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319
EMBL:AACD01000019 HOGENOM:HOG000208957 KO:K12601 OMA:RNCVATH
OrthoDB:EOG4SJ8PN RefSeq:XP_658991.1 ProteinModelPortal:Q5BDJ3
EnsemblFungi:CADANIAT00001220 GeneID:2877164 KEGG:ani:AN1387.2
Uniprot:Q5BDJ3
Length = 306
Score = 109 (43.4 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 27 AGDCKIYVT-DCATGQAFQALSGHSGHVLSLYNWG--GATVLSGSHDRTVRFWDLRTRGC 83
AGD ++ V D +G+ +L+GH+ +LSL +W G +LSGS D V+ W + TR C
Sbjct: 204 AGDSRVIVLYDTTSGEQVASLTGHAAWILSL-SWSNTGEYLLSGSFDGKVKVWSIDTRNC 262
>WB|WBGene00007972 [details] [associations]
symbol:prp-4 species:6239 "Caenorhabditis elegans"
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:Z80215
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR027106 PANTHER:PTHR19846
GO:GO:0001703 InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR PIR:T19776
RefSeq:NP_492363.1 HSSP:O43172 ProteinModelPortal:Q93339 SMR:Q93339
DIP:DIP-26822N IntAct:Q93339 MINT:MINT-1102466 STRING:Q93339
PaxDb:Q93339 EnsemblMetazoa:C36B1.5.1 EnsemblMetazoa:C36B1.5.2
GeneID:183250 KEGG:cel:CELE_C36B1.5 UCSC:C36B1.5.1 CTD:183250
WormBase:C36B1.5 InParanoid:Q93339 NextBio:920460 Uniprot:Q93339
Length = 496
Score = 112 (44.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 29/82 (35%), Positives = 43/82 (52%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNW-- 59
H +V DV F D S+ ++GG DC V D TG+ L GH+ + S+ W
Sbjct: 337 HSKSVADVAFHPD----GSVALTGGH-DCYGRVWDMRTGRCIMFLDGHTKEIHSV-EWMP 390
Query: 60 GGATVLSGSHDRTVRFWDLRTR 81
G +++GS D +++ WDLR R
Sbjct: 391 NGYEMITGSSDNSMKVWDLRMR 412
>UNIPROTKB|C9JXA5 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 HOGENOM:HOG000176356 HGNC:HGNC:4398
IPI:IPI00790302 ProteinModelPortal:C9JXA5 SMR:C9JXA5 STRING:C9JXA5
PRIDE:C9JXA5 Ensembl:ENST00000451587 ArrayExpress:C9JXA5
Bgee:C9JXA5 Uniprot:C9JXA5
Length = 251
Score = 107 (42.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/83 (32%), Positives = 43/83 (51%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G + F++D + ++ S G C ++ D TGQ +GHSG V+SL
Sbjct: 142 HTGYLSCCRFLDD----NQIITSSGDTTCALW--DIETGQQTVGFAGHSGDVMSLSLAPD 195
Query: 61 GATVLSGSHDRTVRFWDLRTRGC 83
G T +SG+ D +++ WD+R C
Sbjct: 196 GRTFVSGACDASIKLWDVRDSMC 218
>SGD|S000003648 [details] [associations]
symbol:MDV1 "Peripheral protein of cytosolic face of
mitochondrial outer membrane" species:4932 "Saccharomyces
cerevisiae" [GO:0005741 "mitochondrial outer membrane"
evidence=IEA;IDA] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0000002 "mitochondrial genome maintenance" evidence=IGI;IMP]
[GO:0000266 "mitochondrial fission" evidence=IGI;IMP;IPI]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016559 "peroxisome fission"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000003648 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005741 EMBL:BK006943
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000002
GO:GO:0016559 GO:GO:0043130 GeneTree:ENSGT00550000075528
HOGENOM:HOG000048466 OrthoDB:EOG469V30 GO:GO:0000266 PDB:2PQN
PDB:3UUX PDBsum:2PQN PDBsum:3UUX EMBL:Z49387 PIR:S56893
RefSeq:NP_012423.1 PDB:2XU6 PDBsum:2XU6 ProteinModelPortal:P47025
SMR:P47025 DIP:DIP-1907N IntAct:P47025 MINT:MINT-389558
STRING:P47025 PaxDb:P47025 EnsemblFungi:YJL112W GeneID:853332
KEGG:sce:YJL112W CYGD:YJL112w OMA:YSSPYKK EvolutionaryTrace:P47025
NextBio:973700 Genevestigator:P47025 GermOnline:YJL112W
InterPro:IPR021061 Pfam:PF11542 Uniprot:P47025
Length = 714
Score = 113 (44.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 25/71 (35%), Positives = 40/71 (56%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
++ G D + + D +G+ + L GH+ + SL + A +++GS+DRTVR WDLRT G
Sbjct: 579 LATGTKDGVVRLWDLRSGKVIRTLKGHTDAITSL-KFDSACLVTGSYDRTVRIWDLRT-G 636
Query: 83 CTNVLTPITVP 93
N + P
Sbjct: 637 LLNKFHAYSAP 647
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 111 (44.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 27/78 (34%), Positives = 40/78 (51%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWG- 60
HDGT+ F TS++ L++G +GD + DC T + GH+ V S W
Sbjct: 133 HDGTIISAQFSPSTSSR---LVTG-SGDFTARLWDCDTQTPIATMKGHTNWV-SCVAWAP 187
Query: 61 -GATVLSGSHDRTVRFWD 77
+ + +GS D T+RFWD
Sbjct: 188 DASIIATGSMDNTIRFWD 205
Score = 96 (38.9 bits), Expect = 0.00055, P = 0.00055
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGAT-VLSGSHDRTVRFWDLRT 80
L++ G+ D + + + LSGH+ + + WGG + S S+D+T+R WD +
Sbjct: 241 LLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCV-RWGGQNWIYSSSYDKTIRIWDAKD 299
Query: 81 RGCTNVL 87
C ++L
Sbjct: 300 GKCLHIL 306
>RGD|1310631 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0000421 "autophagic vacuole
membrane" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005776 "autophagic vacuole" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310631 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
IPI:IPI00766621 ProteinModelPortal:D3ZLV2
Ensembl:ENSRNOT00000056840 UCSC:RGD:1310631 ArrayExpress:D3ZLV2
Uniprot:D3ZLV2
Length = 605
Score = 112 (44.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 29/81 (35%), Positives = 44/81 (54%)
Query: 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGA 62
G+ + IE S + LL + +I+ D + L+GHSG VLS + A
Sbjct: 345 GSNAGITSIEFDSAGAYLLAASNDFASRIWTVD--DYRLRHTLTGHSGKVLSAKFLLDNA 402
Query: 63 TVLSGSHDRTVRFWDLRTRGC 83
++SGSHDRT++ WDLR++ C
Sbjct: 403 RIVSGSHDRTLKLWDLRSKVC 423
>MGI|MGI:1924290 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0000045 "autophagic vacuole
assembly" evidence=TAS] [GO:0000421 "autophagic vacuole membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005776 "autophagic
vacuole" evidence=IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1924290 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319
GeneTree:ENSGT00700000104505 InterPro:IPR020472 PRINTS:PR00320
CTD:55054 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8 GO:GO:0000421
GO:GO:0034045 GO:GO:0000045 InterPro:IPR013923 Pfam:PF08614
EMBL:AB087879 EMBL:AB087880 EMBL:AB087881 EMBL:AK005181
EMBL:AK030983 EMBL:AK131120 EMBL:BC049122 IPI:IPI00223832
IPI:IPI00403350 IPI:IPI00554838 IPI:IPI00554885 IPI:IPI01027707
RefSeq:NP_001192320.1 RefSeq:NP_084122.2 UniGene:Mm.272972
UniGene:Mm.456099 ProteinModelPortal:Q8C0J2 SMR:Q8C0J2
DIP:DIP-31966N IntAct:Q8C0J2 MINT:MINT-136268 STRING:Q8C0J2
PhosphoSite:Q8C0J2 REPRODUCTION-2DPAGE:Q8C0J2 PaxDb:Q8C0J2
PRIDE:Q8C0J2 Ensembl:ENSMUST00000027512 Ensembl:ENSMUST00000113186
Ensembl:ENSMUST00000113190 GeneID:77040 KEGG:mmu:77040
UCSC:uc007bxl.1 UCSC:uc007bxm.1 OMA:LETECQE NextBio:346354
Bgee:Q8C0J2 CleanEx:MM_ATG16L1 Genevestigator:Q8C0J2
GermOnline:ENSMUSG00000026289 Uniprot:Q8C0J2
Length = 607
Score = 112 (44.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 29/81 (35%), Positives = 44/81 (54%)
Query: 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGA 62
G+ + IE S + LL + +I+ D + L+GHSG VLS + A
Sbjct: 364 GSNAGITSIEFDSAGAYLLAASNDFASRIWTVD--DYRLRHTLTGHSGKVLSAKFLLDNA 421
Query: 63 TVLSGSHDRTVRFWDLRTRGC 83
++SGSHDRT++ WDLR++ C
Sbjct: 422 RIVSGSHDRTLKLWDLRSKVC 442
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 104 (41.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
N LI G+ I V D + + L GH ++ SL ++ G V SGS D ++
Sbjct: 76 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 135
Query: 76 WDLRTRGC 83
WD+R +GC
Sbjct: 136 WDIRRKGC 143
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 104 (41.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
N LI G+ I V D + + L GH ++ SL ++ G V SGS D ++
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 76 WDLRTRGC 83
WD+R +GC
Sbjct: 132 WDIRRKGC 139
>POMBASE|SPBC1718.01 [details] [associations]
symbol:pop1 "cullin 1 adaptor protein Pop1" species:4896
"Schizosaccharomyces pombe" [GO:0000747 "conjugation with cellular
fusion" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IGI] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008054 "cyclin catabolic process"
evidence=IMP] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPBC1718.01 GO:GO:0005634 GO:GO:0007346 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0008054 GO:GO:0006995 GO:GO:0000747 KO:K03361
OrthoDB:EOG4B2X5M EMBL:Y08391 PIR:T45136 PIR:T50329
RefSeq:XP_001713146.1 ProteinModelPortal:P87060 IntAct:P87060
STRING:P87060 EnsemblFungi:SPBC1718.01.1 GeneID:2540511
KEGG:spo:SPBC1718.01 OMA:NRCISAS NextBio:20801638 Uniprot:P87060
Length = 775
Score = 113 (44.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 31 KIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRGCTNV 86
+I + D TG ++L H G V + + + G T+++GS DRTVR WDLRT C V
Sbjct: 427 RINIYDTKTGVLIRSLEEHEGDVWT-FEYVGDTLVTGSTDRTVRVWDLRTGECKQV 481
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 113 (44.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 23/90 (25%), Positives = 49/90 (54%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G + +CF ++++ +++ GA D ++ + D + ++ GHS + L +
Sbjct: 144 HGGVISALCF---GKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPT 200
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLTPI 90
G+ +LSGS D+TV+ W+++ R + P+
Sbjct: 201 GSFLLSGSRDKTVQVWNIKKRSAVRTI-PV 229
Score = 102 (41.0 bits), Expect = 0.00022, P = 0.00022
Identities = 29/87 (33%), Positives = 44/87 (50%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
HD RDV I+ +K +I+ + D I + D +TG+ L GH V + +N
Sbjct: 464 HD---RDVNAIQ--VSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPF 518
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
+ SGS DRT+R W++ T+ C L
Sbjct: 519 SRQLASGSGDRTIRIWNVDTQQCVQTL 545
Score = 101 (40.6 bits), Expect = 0.00028, P = 0.00028
Identities = 25/72 (34%), Positives = 36/72 (50%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
N S ++ G+GD I + + T Q Q L GH+G +L L Y G V+S + D V+
Sbjct: 516 NPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKV 575
Query: 76 WDLRTRGCTNVL 87
W L + C L
Sbjct: 576 WSLSSGECVATL 587
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 107 (42.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 27/83 (32%), Positives = 43/83 (51%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G + F++D + ++ S G C ++ D TGQ +GHSG V+SL
Sbjct: 98 HTGYLSCCRFLDD----NQIITSSGDTTCALW--DIETGQQTVGFAGHSGDVMSLSLAPD 151
Query: 61 GATVLSGSHDRTVRFWDLRTRGC 83
G T +SG+ D +++ WD+R C
Sbjct: 152 GRTFVSGACDASIKLWDVRDSMC 174
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 110 (43.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWG--G 61
G +R V + S +S++ SGGA D + V +TG+ GH + S +W G
Sbjct: 174 GHLRGVSAVR-FSPDASMIASGGA-DGAVKVWAASTGKLIYTFEGHLAGI-STISWSPDG 230
Query: 62 ATVLSGSHDRTVRFWDLRT 80
AT+ SGS D+T+R W++ T
Sbjct: 231 ATIASGSDDKTIRLWNVLT 249
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 27/83 (32%), Positives = 41/83 (49%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G V + F S L S G D ++ + D A+G F+ L GH+ + SL ++
Sbjct: 21 HRGPVLSLSF----SPNGKYLASAGE-DQRLKLWDLASGTLFKELRGHTDSITSLAFSPD 75
Query: 61 GATVLSGSHDRTVRFWDLRTRGC 83
+ S S D +VR WD+R+ C
Sbjct: 76 SGLIASASMDNSVRVWDIRSTCC 98
>UNIPROTKB|A4RJV3 [details] [associations]
symbol:MDV1 "Mitochondrial division protein 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0000002
"mitochondrial genome maintenance" evidence=ISS] [GO:0000266
"mitochondrial fission" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0005741 "mitochondrial outer membrane"
evidence=ISS] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=ISS] [GO:0006354 "DNA-dependent transcription, elongation"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006402 "mRNA catabolic process"
evidence=ISS] [GO:0030014 "CCR4-NOT complex" evidence=ISS]
[GO:0030015 "CCR4-NOT core complex" evidence=ISS] [GO:0051020
"GTPase binding" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005741
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006352
GO:GO:0000002 GO:GO:0006402 EMBL:CM001232 GO:GO:0030015
OrthoDB:EOG469V30 GO:GO:0000266 GO:GO:0006354 GO:GO:0051020
RefSeq:XP_003714706.1 ProteinModelPortal:A4RJV3 STRING:A4RJV3
GeneID:2679351 KEGG:mgr:MGG_01711 Uniprot:A4RJV3
Length = 661
Score = 111 (44.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 26 GAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRT 80
G D + + D +GQ + L GH+G V +L + +++GSHDR++R WDLRT
Sbjct: 522 GTADGMVRLWDLRSGQVHRNLVGHTGPVTAL-QFDNMHLVTGSHDRSIRIWDLRT 575
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 107 (42.7 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 27/83 (32%), Positives = 43/83 (51%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G + F++D + ++ S G C ++ D TGQ +GHSG V+SL
Sbjct: 142 HTGYLSCCRFLDD----NQIITSSGDTTCALW--DIETGQQTVGFAGHSGDVMSLSLAPD 195
Query: 61 GATVLSGSHDRTVRFWDLRTRGC 83
G T +SG+ D +++ WD+R C
Sbjct: 196 GRTFVSGACDASIKLWDVRDSMC 218
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 107 (42.7 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 27/83 (32%), Positives = 43/83 (51%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G + F++D + ++ S G C ++ D TGQ +GHSG V+SL
Sbjct: 142 HTGYLSCCRFLDD----NQIITSSGDTTCALW--DIETGQQTVGFAGHSGDVMSLSLAPD 195
Query: 61 GATVLSGSHDRTVRFWDLRTRGC 83
G T +SG+ D +++ WD+R C
Sbjct: 196 GRTFVSGACDASIKLWDVRDSMC 218
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 107 (42.7 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 27/83 (32%), Positives = 43/83 (51%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G + F++D + ++ S G C ++ D TGQ +GHSG V+SL
Sbjct: 142 HTGYLSCCRFLDD----NQIITSSGDTTCALW--DIETGQQTVGFAGHSGDVMSLSLAPD 195
Query: 61 GATVLSGSHDRTVRFWDLRTRGC 83
G T +SG+ D +++ WD+R C
Sbjct: 196 GRTFVSGACDASIKLWDVRDSMC 218
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 107 (42.7 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 27/83 (32%), Positives = 43/83 (51%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G + F++D + ++ S G C ++ D TGQ +GHSG V+SL
Sbjct: 142 HTGYLSCCRFLDD----NQIITSSGDTTCALW--DIETGQQTVGFAGHSGDVMSLSLAPD 195
Query: 61 GATVLSGSHDRTVRFWDLRTRGC 83
G T +SG+ D +++ WD+R C
Sbjct: 196 GRTFVSGACDASIKLWDVRDSMC 218
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 107 (42.7 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 27/83 (32%), Positives = 43/83 (51%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G + F++D + ++ S G C ++ D TGQ +GHSG V+SL
Sbjct: 142 HTGYLSCCRFLDD----NQIITSSGDTTCALW--DIETGQQTVGFAGHSGDVMSLSLAPD 195
Query: 61 GATVLSGSHDRTVRFWDLRTRGC 83
G T +SG+ D +++ WD+R C
Sbjct: 196 GRTFVSGACDASIKLWDVRDSMC 218
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 107 (42.7 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 24/73 (32%), Positives = 36/73 (49%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLS-LYNWGGATVLSGSHDRTVR 74
S K + G+ D I + D +TG L GH V L++ GG +LS + D+T+R
Sbjct: 239 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR 298
Query: 75 FWDLRTRGCTNVL 87
WD + + C L
Sbjct: 299 VWDYKNKRCMKTL 311
Score = 93 (37.8 bits), Expect = 0.00067, P = 0.00067
Identities = 24/88 (27%), Positives = 44/88 (50%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNW-G 60
H +V+D+ F D S K L++ + D I + D + + + GH +V S+
Sbjct: 84 HTDSVQDISF--DHSGK---LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 138
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLT 88
G ++S S D+T++ W+++T C T
Sbjct: 139 GDHIVSASRDKTIKMWEVQTGYCVKTFT 166
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 108 (43.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 24/73 (32%), Positives = 36/73 (49%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLS-LYNWGGATVLSGSHDRTVR 74
S K + G+ D I + D +TG L GH V L++ GG +LS + D+T+R
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR 363
Query: 75 FWDLRTRGCTNVL 87
WD + + C L
Sbjct: 364 VWDFKNKRCMKTL 376
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 110 (43.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
+ GA D + V D T L GH+ V SL + G V+SGS D ++R WD+ T
Sbjct: 394 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL-QFDGIHVVSGSLDTSIRVWDVETGN 452
Query: 83 CTNVLT 88
C + LT
Sbjct: 453 CIHTLT 458
Score = 103 (41.3 bits), Expect = 0.00012, P = 0.00012
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 18 KSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGH--VLSLYNWGGATVLSGSHDRTVRF 75
K ++L+SG A D + + D TGQ Q L G + H ++ + V++ S D TV+
Sbjct: 470 KDNILVSGNA-DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKL 528
Query: 76 WDLRT 80
WDL+T
Sbjct: 529 WDLKT 533
Score = 103 (41.3 bits), Expect = 0.00012, P = 0.00012
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 18 KSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWD 77
+ +++ISG D + V + TG+ L GH+ V ++ V+SGS D T+R WD
Sbjct: 310 RDNIIISGST-DRTLKVWNAETGECIHTLYGHTSTVRCMH-LHEKRVVSGSRDATLRVWD 367
Query: 78 LRTRGCTNVL 87
+ T C +VL
Sbjct: 368 IETGQCLHVL 377
Score = 99 (39.9 bits), Expect = 0.00032, P = 0.00032
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
+ G+ D + V D TGQ L GH V + + G V+SG++D V+ WD T
Sbjct: 354 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV-QYDGRRVVSGAYDFMVKVWDPETET 412
Query: 83 CTNVL 87
C + L
Sbjct: 413 CLHTL 417
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 110 (43.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
+ GA D + V D T L GH+ V SL + G V+SGS D ++R WD+ T
Sbjct: 436 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL-QFDGIHVVSGSLDTSIRVWDVETGN 494
Query: 83 CTNVLT 88
C + LT
Sbjct: 495 CIHTLT 500
Score = 106 (42.4 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 18 KSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGH--VLSLYNWGGATVLSGSHDRTVRF 75
K ++L+SG A D + + D TGQ Q L G S H ++ + V++ S D TV+
Sbjct: 512 KDNILVSGNA-DSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKL 570
Query: 76 WDLRT 80
WDL+T
Sbjct: 571 WDLKT 575
Score = 103 (41.3 bits), Expect = 0.00012, P = 0.00012
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 18 KSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWD 77
+ +++ISG D + V + TG+ L GH+ V ++ V+SGS D T+R WD
Sbjct: 352 RDNIIISGST-DRTLKVWNAETGECIHTLYGHTSTVRCMH-LHEKRVVSGSRDATLRVWD 409
Query: 78 LRTRGCTNVL 87
+ T C +VL
Sbjct: 410 IETGQCLHVL 419
Score = 99 (39.9 bits), Expect = 0.00032, P = 0.00032
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
+ G+ D + V D TGQ L GH V + + G V+SG++D V+ WD T
Sbjct: 396 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV-QYDGRRVVSGAYDFMVKVWDPETET 454
Query: 83 CTNVL 87
C + L
Sbjct: 455 CLHTL 459
>ZFIN|ZDB-GENE-050417-401 [details] [associations]
symbol:atg16l1 "ATG16 autophagy related 16-like 1
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050417-401 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
EMBL:CABZ01067234 EMBL:CABZ01067235 EMBL:CABZ01067236
EMBL:CABZ01067237 EMBL:CABZ01067238 EMBL:CU672237 IPI:IPI00995960
ProteinModelPortal:F1QGM8 Ensembl:ENSDART00000122085 Bgee:F1QGM8
Uniprot:F1QGM8
Length = 605
Score = 110 (43.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGA 62
G+ + IE S S LL + +I+ D + L+GHSG VLS + A
Sbjct: 359 GSNAGITSIEFDSAGSYLLAASNDFASRIWTVD--DYRLRHTLTGHSGKVLSARFLLDNA 416
Query: 63 TVLSGSHDRTVRFWDLRTRGCT 84
++SGS+DRT++ WDLR++ C+
Sbjct: 417 RIVSGSYDRTLKLWDLRSKVCS 438
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 107 (42.7 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 25/71 (35%), Positives = 37/71 (52%)
Query: 18 KSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFW 76
+SSL++SG D + + D TG + L HS V ++ +N G+ + SGS+D VR W
Sbjct: 174 QSSLVVSGSF-DESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIW 232
Query: 77 DLRTRGCTNVL 87
D C L
Sbjct: 233 DTANGQCVKTL 243
Score = 96 (38.9 bits), Expect = 0.00035, P = 0.00035
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 15 TSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTV 73
+++ S++ + KIY + T + + L GH+ +V +N + V+SGS D +V
Sbjct: 130 SADSKSIVTASDDKTLKIY--EVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESV 187
Query: 74 RFWDLRTRGCTNVL 87
R WD+RT C L
Sbjct: 188 RIWDVRTGMCVKTL 201
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 110 (43.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
+ GA D + V D T L GH+ V SL + G V+SGS D ++R WD+ T
Sbjct: 434 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL-QFDGIHVVSGSLDTSIRVWDVETGN 492
Query: 83 CTNVLT 88
C + LT
Sbjct: 493 CIHTLT 498
Score = 103 (41.3 bits), Expect = 0.00013, P = 0.00013
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 18 KSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGH--VLSLYNWGGATVLSGSHDRTVRF 75
K ++L+SG A D + + D TGQ Q L G + H ++ + V++ S D TV+
Sbjct: 510 KDNILVSGNA-DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKL 568
Query: 76 WDLRT 80
WDL+T
Sbjct: 569 WDLKT 573
Score = 103 (41.3 bits), Expect = 0.00013, P = 0.00013
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 18 KSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWD 77
+ +++ISG D + V + TG+ L GH+ V ++ V+SGS D T+R WD
Sbjct: 350 RDNIIISGST-DRTLKVWNAETGECIHTLYGHTSTVRCMH-LHEKRVVSGSRDATLRVWD 407
Query: 78 LRTRGCTNVL 87
+ T C +VL
Sbjct: 408 IETGQCLHVL 417
Score = 99 (39.9 bits), Expect = 0.00035, P = 0.00035
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
+ G+ D + V D TGQ L GH V + + G V+SG++D V+ WD T
Sbjct: 394 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV-QYDGRRVVSGAYDFMVKVWDPETET 452
Query: 83 CTNVL 87
C + L
Sbjct: 453 CLHTL 457
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 107 (42.7 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 25/71 (35%), Positives = 37/71 (52%)
Query: 18 KSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFW 76
+SSL++SG D + + D TG + L HS V ++ +N G+ + SGS+D VR W
Sbjct: 182 QSSLVVSGSF-DESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIW 240
Query: 77 DLRTRGCTNVL 87
D C L
Sbjct: 241 DTANGQCIKTL 251
Score = 96 (38.9 bits), Expect = 0.00036, P = 0.00036
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVR 74
S+ S ++S + D + + + T + + L GH+ +V +N + V+SGS D +VR
Sbjct: 138 SSDSRCVVSA-SDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVR 196
Query: 75 FWDLRTRGCTNVL 87
WD++T C L
Sbjct: 197 IWDVKTGMCIKTL 209
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 107 (42.7 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 25/71 (35%), Positives = 37/71 (52%)
Query: 18 KSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFW 76
+SSL++SG D + + D TG + L HS V ++ +N G+ + SGS+D VR W
Sbjct: 182 QSSLVVSGSF-DESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIW 240
Query: 77 DLRTRGCTNVL 87
D C L
Sbjct: 241 DTANGQCIKTL 251
Score = 96 (38.9 bits), Expect = 0.00036, P = 0.00036
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVR 74
S+ S ++S + D + + + T + + L GH+ +V +N + V+SGS D +VR
Sbjct: 138 SSDSRCVVSA-SDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVR 196
Query: 75 FWDLRTRGCTNVL 87
WD++T C L
Sbjct: 197 IWDVKTGMCIKTL 209
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 110 (43.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
+ GA D + V D T L GH+ V SL + G V+SGS D ++R WD+ T
Sbjct: 436 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL-QFDGIHVVSGSLDTSIRVWDVETGN 494
Query: 83 CTNVLT 88
C + LT
Sbjct: 495 CIHTLT 500
Score = 106 (42.4 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 18 KSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGH--VLSLYNWGGATVLSGSHDRTVRF 75
K ++L+SG A D + + D TGQ Q L G S H ++ + V++ S D TV+
Sbjct: 512 KDNILVSGNA-DSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKL 570
Query: 76 WDLRT 80
WDL+T
Sbjct: 571 WDLKT 575
Score = 103 (41.3 bits), Expect = 0.00013, P = 0.00013
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 18 KSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWD 77
+ +++ISG D + V + TG+ L GH+ V ++ V+SGS D T+R WD
Sbjct: 352 RDNIIISGST-DRTLKVWNAETGECIHTLYGHTSTVRCMH-LHEKRVVSGSRDATLRVWD 409
Query: 78 LRTRGCTNVL 87
+ T C +VL
Sbjct: 410 IETGQCLHVL 419
Score = 99 (39.9 bits), Expect = 0.00035, P = 0.00035
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
+ G+ D + V D TGQ L GH V + + G V+SG++D V+ WD T
Sbjct: 396 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV-QYDGRRVVSGAYDFMVKVWDPETET 454
Query: 83 CTNVL 87
C + L
Sbjct: 455 CLHTL 459
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 107 (42.7 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 24/73 (32%), Positives = 36/73 (49%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLS-LYNWGGATVLSGSHDRTVR 74
S K + G+ D I + D +TG L GH V L++ GG +LS + D+T+R
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR 363
Query: 75 FWDLRTRGCTNVL 87
WD + + C L
Sbjct: 364 VWDYKNKRCMKTL 376
Score = 93 (37.8 bits), Expect = 0.00087, P = 0.00087
Identities = 24/88 (27%), Positives = 44/88 (50%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNW-G 60
H +V+D+ F D S K L++ + D I + D + + + GH +V S+
Sbjct: 149 HTDSVQDISF--DHSGK---LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLT 88
G ++S S D+T++ W+++T C T
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFT 231
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 107 (42.7 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 24/73 (32%), Positives = 36/73 (49%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLS-LYNWGGATVLSGSHDRTVR 74
S K + G+ D I + D +TG L GH V L++ GG +LS + D+T+R
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR 363
Query: 75 FWDLRTRGCTNVL 87
WD + + C L
Sbjct: 364 VWDYKNKRCMKTL 376
Score = 93 (37.8 bits), Expect = 0.00087, P = 0.00087
Identities = 24/88 (27%), Positives = 44/88 (50%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNW-G 60
H +V+D+ F D S K L++ + D I + D + + + GH +V S+
Sbjct: 149 HTDSVQDISF--DHSGK---LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLT 88
G ++S S D+T++ W+++T C T
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFT 231
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 107 (42.7 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 24/73 (32%), Positives = 36/73 (49%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLS-LYNWGGATVLSGSHDRTVR 74
S K + G+ D I + D +TG L GH V L++ GG +LS + D+T+R
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR 363
Query: 75 FWDLRTRGCTNVL 87
WD + + C L
Sbjct: 364 VWDYKNKRCMKTL 376
Score = 93 (37.8 bits), Expect = 0.00087, P = 0.00087
Identities = 24/88 (27%), Positives = 44/88 (50%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNW-G 60
H +V+D+ F D S K L++ + D I + D + + + GH +V S+
Sbjct: 149 HTDSVQDISF--DHSGK---LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLT 88
G ++S S D+T++ W+++T C T
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFT 231
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 107 (42.7 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 24/73 (32%), Positives = 36/73 (49%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLS-LYNWGGATVLSGSHDRTVR 74
S K + G+ D I + D +TG L GH V L++ GG +LS + D+T+R
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR 363
Query: 75 FWDLRTRGCTNVL 87
WD + + C L
Sbjct: 364 VWDYKNKRCMKTL 376
Score = 93 (37.8 bits), Expect = 0.00087, P = 0.00087
Identities = 24/88 (27%), Positives = 44/88 (50%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNW-G 60
H +V+D+ F D S K L++ + D I + D + + + GH +V S+
Sbjct: 149 HTDSVQDISF--DHSGK---LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLT 88
G ++S S D+T++ W+++T C T
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFT 231
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 107 (42.7 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 24/73 (32%), Positives = 36/73 (49%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLS-LYNWGGATVLSGSHDRTVR 74
S K + G+ D I + D +TG L GH V L++ GG +LS + D+T+R
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR 363
Query: 75 FWDLRTRGCTNVL 87
WD + + C L
Sbjct: 364 VWDYKNKRCMKTL 376
Score = 93 (37.8 bits), Expect = 0.00087, P = 0.00087
Identities = 24/88 (27%), Positives = 44/88 (50%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNW-G 60
H +V+D+ F D S K L++ + D I + D + + + GH +V S+
Sbjct: 149 HTDSVQDISF--DHSGK---LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLT 88
G ++S S D+T++ W+++T C T
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFT 231
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 107 (42.7 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 24/73 (32%), Positives = 36/73 (49%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLS-LYNWGGATVLSGSHDRTVR 74
S K + G+ D I + D +TG L GH V L++ GG +LS + D+T+R
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR 363
Query: 75 FWDLRTRGCTNVL 87
WD + + C L
Sbjct: 364 VWDYKNKRCMKTL 376
Score = 93 (37.8 bits), Expect = 0.00087, P = 0.00087
Identities = 24/88 (27%), Positives = 44/88 (50%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNW-G 60
H +V+D+ F D S K L++ + D I + D + + + GH +V S+
Sbjct: 149 HTDSVQDISF--DHSGK---LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLT 88
G ++S S D+T++ W+++T C T
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFT 231
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 107 (42.7 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 24/73 (32%), Positives = 36/73 (49%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLS-LYNWGGATVLSGSHDRTVR 74
S K + G+ D I + D +TG L GH V L++ GG +LS + D+T+R
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR 363
Query: 75 FWDLRTRGCTNVL 87
WD + + C L
Sbjct: 364 VWDYKNKRCMKTL 376
Score = 93 (37.8 bits), Expect = 0.00087, P = 0.00087
Identities = 24/88 (27%), Positives = 44/88 (50%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNW-G 60
H +V+D+ F D S K L++ + D I + D + + + GH +V S+
Sbjct: 149 HTDSVQDISF--DHSGK---LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLT 88
G ++S S D+T++ W+++T C T
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFT 231
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 107 (42.7 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 24/73 (32%), Positives = 36/73 (49%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLS-LYNWGGATVLSGSHDRTVR 74
S K + G+ D I + D +TG L GH V L++ GG +LS + D+T+R
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR 363
Query: 75 FWDLRTRGCTNVL 87
WD + + C L
Sbjct: 364 VWDYKNKRCMKTL 376
Score = 93 (37.8 bits), Expect = 0.00087, P = 0.00087
Identities = 24/88 (27%), Positives = 44/88 (50%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNW-G 60
H +V+D+ F D S K L++ + D I + D + + + GH +V S+
Sbjct: 149 HTDSVQDISF--DHSGK---LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLT 88
G ++S S D+T++ W+++T C T
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFT 231
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 107 (42.7 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 24/73 (32%), Positives = 36/73 (49%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLS-LYNWGGATVLSGSHDRTVR 74
S K + G+ D I + D +TG L GH V L++ GG +LS + D+T+R
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR 363
Query: 75 FWDLRTRGCTNVL 87
WD + + C L
Sbjct: 364 VWDYKNKRCMKTL 376
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 107 (42.7 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 24/73 (32%), Positives = 36/73 (49%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLS-LYNWGGATVLSGSHDRTVR 74
S K + G+ D I + D +TG L GH V L++ GG +LS + D+T+R
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR 363
Query: 75 FWDLRTRGCTNVL 87
WD + + C L
Sbjct: 364 VWDYKNKRCMKTL 376
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 108 (43.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 21 LLISGGAGD-CKIYVTDCATGQAFQALSGHSGHVLSLYNWG-GATVLSGSHDRTVRFWDL 78
+L++GG C+++ D T ALSGH V S++ V++GSHD T++FWDL
Sbjct: 274 VLLTGGRDSVCRVW--DIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDL 331
Query: 79 RTRGCTNVLT 88
R + LT
Sbjct: 332 RYGKTMSTLT 341
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 110 (43.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
+ GA D + V D T L GH+ V SL + G V+SGS D ++R WD+ T
Sbjct: 514 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL-QFDGIHVVSGSLDTSIRVWDVETGN 572
Query: 83 CTNVLT 88
C + LT
Sbjct: 573 CIHTLT 578
Score = 103 (41.3 bits), Expect = 0.00015, P = 0.00015
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 18 KSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGH--VLSLYNWGGATVLSGSHDRTVRF 75
K ++L+SG A D + + D TGQ Q L G + H ++ + V++ S D TV+
Sbjct: 590 KDNILVSGNA-DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKL 648
Query: 76 WDLRT 80
WDL+T
Sbjct: 649 WDLKT 653
Score = 103 (41.3 bits), Expect = 0.00015, P = 0.00015
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 18 KSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWD 77
+ +++ISG D + V + TG+ L GH+ V ++ V+SGS D T+R WD
Sbjct: 430 RDNIIISGST-DRTLKVWNAETGECIHTLYGHTSTVRCMH-LHEKRVVSGSRDATLRVWD 487
Query: 78 LRTRGCTNVL 87
+ T C +VL
Sbjct: 488 IETGQCLHVL 497
Score = 99 (39.9 bits), Expect = 0.00041, P = 0.00041
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
+ G+ D + V D TGQ L GH V + + G V+SG++D V+ WD T
Sbjct: 474 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV-QYDGRRVVSGAYDFMVKVWDPETET 532
Query: 83 CTNVL 87
C + L
Sbjct: 533 CLHTL 537
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 110 (43.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
+ GA D + V D T L GH+ V SL + G V+SGS D ++R WD+ T
Sbjct: 519 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL-QFDGIHVVSGSLDTSIRVWDVETGN 577
Query: 83 CTNVLT 88
C + LT
Sbjct: 578 CIHTLT 583
Score = 103 (41.3 bits), Expect = 0.00015, P = 0.00015
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 18 KSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGH--VLSLYNWGGATVLSGSHDRTVRF 75
K ++L+SG A D + + D TGQ Q L G + H ++ + V++ S D TV+
Sbjct: 595 KDNILVSGNA-DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKL 653
Query: 76 WDLRT 80
WDL+T
Sbjct: 654 WDLKT 658
Score = 103 (41.3 bits), Expect = 0.00015, P = 0.00015
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 18 KSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWD 77
+ +++ISG D + V + TG+ L GH+ V ++ V+SGS D T+R WD
Sbjct: 435 RDNIIISGST-DRTLKVWNAETGECIHTLYGHTSTVRCMH-LHEKRVVSGSRDATLRVWD 492
Query: 78 LRTRGCTNVL 87
+ T C +VL
Sbjct: 493 IETGQCLHVL 502
Score = 99 (39.9 bits), Expect = 0.00041, P = 0.00041
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
+ G+ D + V D TGQ L GH V + + G V+SG++D V+ WD T
Sbjct: 479 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV-QYDGRRVVSGAYDFMVKVWDPETET 537
Query: 83 CTNVL 87
C + L
Sbjct: 538 CLHTL 542
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 110 (43.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
+ GA D + V D T L GH+ V SL + G V+SGS D ++R WD+ T
Sbjct: 567 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL-QFDGIHVVSGSLDTSIRVWDVETGN 625
Query: 83 CTNVLT 88
C + LT
Sbjct: 626 CIHTLT 631
Score = 104 (41.7 bits), Expect = 0.00013, P = 0.00013
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 18 KSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGH--VLSLYNWGGATVLSGSHDRTVRF 75
K ++L+SG A D + + D TGQ Q L G H ++ + V++ S D TV+
Sbjct: 643 KDNILVSGNA-DSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNFVITSSDDGTVKL 701
Query: 76 WDLRT 80
WDLRT
Sbjct: 702 WDLRT 706
Score = 103 (41.3 bits), Expect = 0.00017, P = 0.00017
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 18 KSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWD 77
+ +++ISG D + V + TG+ L GH+ V ++ V+SGS D T+R WD
Sbjct: 483 RDNIIISGST-DRTLKVWNAETGECIHTLYGHTSTVRCMH-LHEKRVVSGSRDATLRVWD 540
Query: 78 LRTRGCTNVL 87
+ T C +VL
Sbjct: 541 IETGQCLHVL 550
Score = 99 (39.9 bits), Expect = 0.00045, P = 0.00045
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
+ G+ D + V D TGQ L GH V + + G V+SG++D V+ WD T
Sbjct: 527 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV-QYDGRRVVSGAYDFMVKVWDPETET 585
Query: 83 CTNVL 87
C + L
Sbjct: 586 CLHTL 590
>DICTYBASE|DDB_G0287653 [details] [associations]
symbol:thoc6 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0287653 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GenomeReviews:CM000154_GR
EMBL:AAFI02000103 eggNOG:NOG287711 RefSeq:XP_637105.1
ProteinModelPortal:Q54K59 EnsemblProtists:DDB0233739 GeneID:8626200
KEGG:ddi:DDB_G0287653 InParanoid:Q54K59 OMA:SANFGAV Uniprot:Q54K59
Length = 479
Score = 107 (42.7 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 23/89 (25%), Positives = 43/89 (48%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G + + I + ++L +G+ Y D T Q GH+ ++ ++ YN
Sbjct: 199 HGGQLSEKSEINGIDSHGAILYFA-SGNNNAYSYDLTTSQIISCYRGHTDYLHTIKYNSS 257
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLTP 89
+ +++ S D TVR WD ++ C ++L P
Sbjct: 258 FSNIITSSEDSTVRLWDSKSGQCVSILNP 286
>TAIR|locus:2127408 [details] [associations]
symbol:EMB2271 "AT4G21130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0009793 "embryo
development ending in seed dormancy" evidence=NAS] [GO:0006364
"rRNA processing" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006364 GO:GO:0080008 HOGENOM:HOG000188732
KO:K14793 EMBL:AY874865 IPI:IPI00522353 RefSeq:NP_193845.2
UniGene:At.54451 ProteinModelPortal:Q3MKM6 SMR:Q3MKM6 STRING:Q3MKM6
EnsemblPlants:AT4G21130.1 GeneID:827861 KEGG:ath:AT4G21130
TAIR:At4g21130 InParanoid:Q3MKM6 OMA:DIRTREH PhylomeDB:Q3MKM6
ProtClustDB:CLSN2685798 Genevestigator:Q3MKM6 Uniprot:Q3MKM6
Length = 479
Score = 107 (42.7 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVR 74
S+ L +GG DC +++ D T + QA +GH G V SL + G A + SGS+D T+
Sbjct: 215 SSDGRYLATGGV-DCHVHLWDIRTREHVQAFTGHCGIVSSLCFREGTAELFSGSYDGTLS 273
Query: 75 FWDLRTR 81
W+ R
Sbjct: 274 IWNAEHR 280
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 106 (42.4 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 24/74 (32%), Positives = 37/74 (50%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLS-LYNWGGATVLSGSHDRTVR 74
S K + G+ D I + D +TG L GH V L++ GG V+S + D+T+R
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLR 363
Query: 75 FWDLRTRGCTNVLT 88
WD + + C L+
Sbjct: 364 IWDYKNKRCMKTLS 377
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 108 (43.1 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 30/84 (35%), Positives = 39/84 (46%)
Query: 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATV 64
+R VCF D ++ GA D +I V D T +GH + SL + G T+
Sbjct: 349 IRSVCFSPDGK-----YLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTI 403
Query: 65 LSGSHDRTVRFWDLRTRGCTNVLT 88
SGS DRTVR WD+ V T
Sbjct: 404 ASGSGDRTVRLWDIENGTALTVFT 427
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 104 (41.7 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 28/69 (40%), Positives = 39/69 (56%)
Query: 14 DTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRT 72
D S +S L S + D + + D A+GQ + L GH+G V + +N +LSGS D T
Sbjct: 74 DGSYDNSQLCSCSS-DKTVILWDVASGQVTRKLRGHAGKVNCVQFNEEATVMLSGSIDGT 132
Query: 73 VRFWDLRTR 81
VR WD R+R
Sbjct: 133 VRCWDTRSR 141
>ZFIN|ZDB-GENE-041010-198 [details] [associations]
symbol:thoc6 "THO complex 6 homolog (Drosophila)"
species:7955 "Danio rerio" [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041010-198 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0006397 GO:GO:0003723 GO:GO:0051028 KO:K13175 EMBL:BC083222
IPI:IPI00502677 RefSeq:NP_001006095.1 UniGene:Dr.77715
ProteinModelPortal:Q5XJS5 STRING:Q5XJS5 PRIDE:Q5XJS5
GeneID:100004014 KEGG:dre:100004014 CTD:79228 HOGENOM:HOG000008085
HOVERGEN:HBG079643 InParanoid:Q5XJS5 OrthoDB:EOG42V8GK
NextBio:20786086 ArrayExpress:Q5XJS5 Uniprot:Q5XJS5
Length = 323
Score = 104 (41.7 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 28/65 (43%), Positives = 33/65 (50%)
Query: 18 KSSLLISGGAGDCKIYVTDCATGQAFQALSGHSG--HVLSLYNWGGATVLSGSHDRTVRF 75
K + LI GG GD I++ D TG L GH+ H LS G +LSG D VR
Sbjct: 121 KDNNLIVGG-GDNNIHIMDMETGTFKSVLKGHTDYIHCLSFKEREGE-ILSGGEDGAVRI 178
Query: 76 WDLRT 80
WD RT
Sbjct: 179 WDSRT 183
>TAIR|locus:2036823 [details] [associations]
symbol:AT1G62020 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0030244 "cellulose biosynthetic
process" evidence=RCA] [GO:0048193 "Golgi vesicle transport"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 EMBL:AC004392 EMBL:AY050400
EMBL:BT001048 IPI:IPI00528095 PIR:T02146 RefSeq:NP_176393.1
UniGene:At.48329 ProteinModelPortal:Q94A40 SMR:Q94A40 IntAct:Q94A40
STRING:Q94A40 PaxDb:Q94A40 PRIDE:Q94A40 EnsemblPlants:AT1G62020.1
GeneID:842497 KEGG:ath:AT1G62020 GeneFarm:2989 TAIR:At1g62020
HOGENOM:HOG000195913 InParanoid:Q94A40 KO:K05236 OMA:PLAADHI
PhylomeDB:Q94A40 ProtClustDB:CLSN2914500 Genevestigator:Q94A40
InterPro:IPR016391 PIRSF:PIRSF003354 Uniprot:Q94A40
Length = 1216
Score = 111 (44.1 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 29/88 (32%), Positives = 47/88 (53%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H+G VR V F N L +SGG D KI V + + L GH ++ ++ ++
Sbjct: 50 HEGPVRGVHF----HNSQPLFVSGG-DDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHE 104
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLT 88
++S S D+T+R W+ ++R C +VLT
Sbjct: 105 YPWIVSASDDQTIRIWNWQSRTCVSVLT 132
>UNIPROTKB|P74598 [details] [associations]
symbol:sll1491 "Uncharacterized WD repeat-containing
protein sll1491" species:1111708 "Synechocystis sp. PCC 6803
substr. Kazusa" [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0030288 EMBL:BA000022
GenomeReviews:BA000022_GR PIR:S76794 RefSeq:NP_442894.1
RefSeq:YP_005652955.1 ProteinModelPortal:P74598 IntAct:P74598
GeneID:12255406 GeneID:952007 KEGG:syn:sll1491 KEGG:syy:SYNGTS_3002
PATRIC:23843592 OMA:KMPEQTI ProtClustDB:CLSK2301952 Uniprot:P74598
Length = 348
Score = 104 (41.7 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 32 IYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDL 78
I + D A G+ L GH G VLSL ++ G T+ SG+ D+TV+ WDL
Sbjct: 296 IMIFDLANGKQVTTLRGHQGWVLSLAFSPDGNTLYSGAEDKTVKIWDL 343
>FB|FBgn0030011 [details] [associations]
symbol:Gbeta5 "Gbeta5" species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K04539 OMA:ATDGLHE EMBL:BT004841 RefSeq:NP_572452.1
UniGene:Dm.11050 SMR:Q9W3J1 IntAct:Q9W3J1 STRING:Q9W3J1
EnsemblMetazoa:FBtr0071189 GeneID:31744 KEGG:dme:Dmel_CG10763
UCSC:CG10763-RA CTD:31744 FlyBase:FBgn0030011 InParanoid:Q9W3J1
OrthoDB:EOG4TTF0F GenomeRNAi:31744 NextBio:775120 Uniprot:Q9W3J1
Length = 358
Score = 104 (41.7 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 27/74 (36%), Positives = 39/74 (52%)
Query: 10 CFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLY---NWGGATVLS 66
C I S++ L G+GD + D +GQ Q+ GHSG V+++ N G T +S
Sbjct: 163 CCIYPNSDQQILT---GSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVS 219
Query: 67 GSHDRTVRFWDLRT 80
GS DR WD+R+
Sbjct: 220 GSCDRMAFIWDMRS 233
>UNIPROTKB|H0YLU1 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007186
EMBL:AC023906 HGNC:HGNC:4401 ChiTaRS:GNB5 EMBL:AC010674
Ensembl:ENST00000558519 Bgee:H0YLU1 Uniprot:H0YLU1
Length = 103
Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 15 TSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLY---NWGGATVLSGSHDR 71
T++ +L + G G C ++ D +GQ Q+ GH VL L + G T +SG D+
Sbjct: 19 TNSDMQILTASGDGTCALW--DVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDK 76
Query: 72 TVRFWDLRTRGC 83
WD+R+ C
Sbjct: 77 KAMVWDMRSGQC 88
>ZFIN|ZDB-GENE-050522-303 [details] [associations]
symbol:fbxw2 "F-box and WD repeat domain containing
2" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-050522-303 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 CTD:26190 HOVERGEN:HBG051593
KO:K10261 EMBL:BC095232 IPI:IPI00832593 RefSeq:NP_001018175.1
UniGene:Dr.79396 ProteinModelPortal:Q503P7 STRING:Q503P7
GeneID:553942 KEGG:dre:553942 InParanoid:Q503P7 NextBio:20880537
ArrayExpress:Q503P7 Uniprot:Q503P7
Length = 455
Score = 105 (42.0 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 26/64 (40%), Positives = 34/64 (53%)
Query: 26 GAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCT 84
G+ D I + +TG Q GH+G V S+ YN T++SGS D TV+ W L C
Sbjct: 202 GSFDNTIACWEWSTGAKIQQFRGHTGAVFSIDYNDELDTLVSGSADFTVKVWSLSAGTCV 261
Query: 85 NVLT 88
N LT
Sbjct: 262 NTLT 265
>WB|WBGene00022119 [details] [associations]
symbol:Y71F9AL.17 species:6239 "Caenorhabditis elegans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0032940 "secretion by cell"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR011041 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0040010
GO:GO:0006915 GO:GO:0006886 GO:GO:0003824 GO:GO:0002119
GO:GO:0032940 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0000003
GO:GO:0008152 GO:GO:0030126 EMBL:FO081777 HOGENOM:HOG000195913
KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:YDQHNPF SUPFAM:SSF50952
RefSeq:NP_491069.1 ProteinModelPortal:Q9N4H7 SMR:Q9N4H7
DIP:DIP-24621N IntAct:Q9N4H7 MINT:MINT-1075577 STRING:Q9N4H7
PaxDb:Q9N4H7 EnsemblMetazoa:Y71F9AL.17 GeneID:171860
KEGG:cel:CELE_Y71F9AL.17 UCSC:Y71F9AL.17 CTD:171860
WormBase:Y71F9AL.17 InParanoid:Q9N4H7 NextBio:873005 Uniprot:Q9N4H7
Length = 1232
Score = 110 (43.8 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 28/88 (31%), Positives = 45/88 (51%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHV-LSLYNWG 60
HDG VR +CF D + +SGG D KI V + + L GH ++ + ++
Sbjct: 52 HDGPVRGICFHHD----QPIFVSGG-DDYKIKVWNYKQKRCIFTLLGHLDYIRTTFFHHK 106
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLT 88
++S S D+TVR W+ ++R +LT
Sbjct: 107 YPWIISASDDQTVRIWNWQSRNSIAILT 134
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 105 (42.0 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 25/57 (43%), Positives = 31/57 (54%)
Query: 21 LLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGG-ATVLSGSHDRTVRFW 76
LL S G D I++ D G + LSGH+ V L WGG + SGS DRTV+ W
Sbjct: 209 LLASCGK-DGNIFIWDTVQGTVVRCLSGHTASVTCL-RWGGEGLIYSGSQDRTVKMW 263
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 106 (42.4 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 28/74 (37%), Positives = 37/74 (50%)
Query: 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATV 64
+R VCF D ++ GA D +I V D AT SGH + SL + G +
Sbjct: 319 IRSVCFSPDGK-----YLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYI 373
Query: 65 LSGSHDRTVRFWDL 78
SGS D+TVR WD+
Sbjct: 374 ASGSGDKTVRLWDI 387
>TAIR|locus:2040804 [details] [associations]
symbol:WDR55 "AT2G34260" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISS] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0009553 "embryo sac development"
evidence=IMP] [GO:0009793 "embryo development ending in seed
dormancy" evidence=IMP] [GO:0009855 "determination of bilateral
symmetry" evidence=IMP] [GO:0009960 "endosperm development"
evidence=IMP] [GO:0010197 "polar nucleus fusion" evidence=IMP]
[GO:0009220 "pyrimidine ribonucleotide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0009793
GO:GO:0009960 GO:GO:0009855 GO:GO:0010197 EMBL:AC004481
HOGENOM:HOG000242496 InterPro:IPR017422 PIRSF:PIRSF038169
OMA:WDTRQRS EMBL:AY087666 EMBL:BT005438 EMBL:AK117481
IPI:IPI00524969 PIR:T02314 RefSeq:NP_565782.1 UniGene:At.37828
ProteinModelPortal:O80775 SMR:O80775 STRING:O80775 PaxDb:O80775
PRIDE:O80775 EnsemblPlants:AT2G34260.1 GeneID:817987
KEGG:ath:AT2G34260 TAIR:At2g34260 InParanoid:O80775
PhylomeDB:O80775 ProtClustDB:CLSN2917231 ArrayExpress:O80775
Genevestigator:O80775 Uniprot:O80775
Length = 353
Score = 103 (41.3 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 28/85 (32%), Positives = 39/85 (45%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG-QAFQALSGHSGHVLSLYNWG 60
H + R V FI+D +++ A DC I TD TG Q + H V +L N
Sbjct: 50 HKESCRAVRFIDDGQR----IVTASA-DCSILATDVETGAQVAHLENAHEDAVNTLINVT 104
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTN 85
T+ SG V+ WD R R C++
Sbjct: 105 ETTIASGDDKGCVKIWDTRQRSCSH 129
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 106 (42.4 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 23/66 (34%), Positives = 37/66 (56%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTR 81
+++ G+ D I + + AT Q L GHS V L + ++SGS D+T+R W+ RT
Sbjct: 285 ILASGSYDATIRLWNLATFQQVALLEGHSSGVTCL-QFDQCKLISGSMDKTIRIWNYRTS 343
Query: 82 GCTNVL 87
C ++L
Sbjct: 344 ECISIL 349
Score = 102 (41.0 bits), Expect = 0.00016, P = 0.00016
Identities = 30/89 (33%), Positives = 44/89 (49%)
Query: 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNW 59
+H T +C D S+LL+SG A DC + + + G+ L GH+G V S+
Sbjct: 349 LHGHTDSVLCLTFD----STLLVSGSA-DCTVKLWHFSGGKRI-TLRGHTGPVNSVRIIR 402
Query: 60 GGATVLSGSHDRTVRFWDLRTRGCTNVLT 88
VLSGS D T++ W L T C + +
Sbjct: 403 DRGLVLSGSDDSTIKIWSLETNTCLHTFS 431
>DICTYBASE|DDB_G0275323 [details] [associations]
symbol:tipD "autophagy protein 16" species:44689
"Dictyostelium discoideum" [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0031154 "culmination involved in sorocarp
development" evidence=IMP] [GO:0034274 "Atg12-Atg5-Atg16 complex"
evidence=ISS] [GO:0019776 "Atg8 ligase activity" evidence=ISS]
[GO:0016236 "macroautophagy" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275323
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013923 Pfam:PF08614 OMA:LETECQE
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0031154
GO:GO:0016236 GO:GO:0034274 GO:GO:0019776 EMBL:AF019236 PIR:T08602
RefSeq:XP_643673.1 ProteinModelPortal:O15736 STRING:O15736
EnsemblProtists:DDB0215341 GeneID:8619939 KEGG:ddi:DDB_G0275323
ProtClustDB:CLSZ2729185 Uniprot:O15736
Length = 612
Score = 106 (42.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 23/84 (27%), Positives = 43/84 (51%)
Query: 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGAT 63
G + + + + N S+L + +++ T+ G++ L+GH G V +
Sbjct: 364 GASQSIVSVSFSPNDESILGTSNDNSARLWNTEL--GRSRHTLTGHIGKVYTGKFINSNR 421
Query: 64 VLSGSHDRTVRFWDLRTRGCTNVL 87
V++GSHDRT++ WDL+ CT +
Sbjct: 422 VVTGSHDRTIKLWDLQKGYCTRTI 445
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 105 (42.0 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 27/69 (39%), Positives = 35/69 (50%)
Query: 21 LLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGG-ATVLSGSHDRTVRFWDLR 79
+L SGG +C + V D T + GH G +LSL + V+SGS D TV+ WDL
Sbjct: 305 VLFSGGRDNC-VRVWDMRTRANIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLA 363
Query: 80 TRGCTNVLT 88
T LT
Sbjct: 364 TGTSAATLT 372
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 104 (41.7 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 21 LLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVL-SGSHDRTVRFW 76
L + G GDC+I+ D GQ ++GH+ V ++ WGGA ++ + S DRTV+ W
Sbjct: 224 LASASGDGDCRIW--DVKLGQCLMNIAGHTNAVTAV-RWGGAGLIYTSSKDRTVKMW 277
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 105 (42.0 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 29/87 (33%), Positives = 42/87 (48%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGG 61
H TVR C + S+L++G D + V D +G+ L GH V + + G
Sbjct: 337 HTSTVR--CM----AMAGSILVTGSR-DTTLRVWDVESGRHLATLHGHHAAVRCV-QFDG 388
Query: 62 ATVLSGSHDRTVRFWDLRTRGCTNVLT 88
TV+SG +D TV+ W+ T C LT
Sbjct: 389 TTVVSGGYDFTVKIWNAHTGRCIRTLT 415
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 105 (42.0 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 29/87 (33%), Positives = 42/87 (48%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGG 61
H TVR C + S+L++G D + V D +G+ L GH V + + G
Sbjct: 337 HTSTVR--CM----AMAGSILVTGSR-DTTLRVWDVESGRHLATLHGHHAAVRCV-QFDG 388
Query: 62 ATVLSGSHDRTVRFWDLRTRGCTNVLT 88
TV+SG +D TV+ W+ T C LT
Sbjct: 389 TTVVSGGYDFTVKIWNAHTGRCIRTLT 415
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 105 (42.0 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G V + F S L S G D ++ + D A+G F+ L GH+ ++ SL ++
Sbjct: 467 HRGPVLSLAF----SPNGKYLASAGE-DQRLKLWDLASGTLFKELRGHTDNITSLTFSPD 521
Query: 61 GATVLSGSHDRTVRFWDLRTRGCT 84
+ + S S D +VR WD+R C+
Sbjct: 522 SSLIASASMDNSVRVWDIRNTHCS 545
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 102 (41.0 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 28/82 (34%), Positives = 40/82 (48%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLY--NW 59
H G V ++ + D S+L S D + V D TG+ + L GH+ V S Y
Sbjct: 108 HSGAVMELHYNTD----GSMLFSAST-DKTVAVWDSETGERVKRLKGHTSFVNSCYPARR 162
Query: 60 GGATVLSGSHDRTVRFWDLRTR 81
G V +GS D TV+ WD+R +
Sbjct: 163 GPQLVCTGSDDGTVKLWDIRKK 184
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 102 (41.0 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 28/82 (34%), Positives = 40/82 (48%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLY--NW 59
H G V ++ + D S+L S D + V D TG+ + L GH+ V S Y
Sbjct: 109 HSGAVMELHYNTD----GSMLFSAST-DKTVAVWDSETGERVKRLKGHTSFVNSCYPARR 163
Query: 60 GGATVLSGSHDRTVRFWDLRTR 81
G V +GS D TV+ WD+R +
Sbjct: 164 GPQLVCTGSDDGTVKLWDIRKK 185
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 102 (41.0 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 28/82 (34%), Positives = 40/82 (48%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLY--NW 59
H G V ++ + D S+L S D + V D TG+ + L GH+ V S Y
Sbjct: 109 HSGAVMELHYNTD----GSMLFSAST-DKTVAVWDSETGERVKRLKGHTSFVNSCYPARR 163
Query: 60 GGATVLSGSHDRTVRFWDLRTR 81
G V +GS D TV+ WD+R +
Sbjct: 164 GPQLVCTGSDDGTVKLWDIRKK 185
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 102 (41.0 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 28/82 (34%), Positives = 40/82 (48%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLY--NW 59
H G V ++ + D S+L S D + V D TG+ + L GH+ V S Y
Sbjct: 109 HSGAVMELHYNTD----GSMLFSAST-DKTVAVWDSETGERVKRLKGHTSFVNSCYPARR 163
Query: 60 GGATVLSGSHDRTVRFWDLRTR 81
G V +GS D TV+ WD+R +
Sbjct: 164 GPQLVCTGSDDGTVKLWDIRKK 185
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 102 (41.0 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 28/82 (34%), Positives = 40/82 (48%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLY--NW 59
H G V ++ + D S+L S D + V D TG+ + L GH+ V S Y
Sbjct: 109 HSGAVMELHYNTD----GSMLFSAST-DKTVAVWDSETGERVKRLKGHTSFVNSCYPARR 163
Query: 60 GGATVLSGSHDRTVRFWDLRTR 81
G V +GS D TV+ WD+R +
Sbjct: 164 GPQLVCTGSDDGTVKLWDIRKK 185
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 102 (41.0 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 28/82 (34%), Positives = 40/82 (48%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLY--NW 59
H G V ++ + D S+L S D + V D TG+ + L GH+ V S Y
Sbjct: 109 HSGAVMELHYNTD----GSMLFSAST-DKTVAVWDSETGERVKRLKGHTSFVNSCYPARR 163
Query: 60 GGATVLSGSHDRTVRFWDLRTR 81
G V +GS D TV+ WD+R +
Sbjct: 164 GPQLVCTGSDDGTVKLWDIRKK 185
>TAIR|locus:2157762 [details] [associations]
symbol:AT5G50230 "AT5G50230" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:BT011244 EMBL:BT020329 IPI:IPI00518229
RefSeq:NP_199834.2 UniGene:At.29744 ProteinModelPortal:Q6NNP0
SMR:Q6NNP0 PRIDE:Q6NNP0 EnsemblPlants:AT5G50230.1 GeneID:835088
KEGG:ath:AT5G50230 TAIR:At5g50230 InParanoid:Q6NNP0
PhylomeDB:Q6NNP0 ProtClustDB:CLSN2681670 Genevestigator:Q6NNP0
Uniprot:Q6NNP0
Length = 509
Score = 104 (41.7 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 25/86 (29%), Positives = 47/86 (54%)
Query: 4 GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHV--LSLYNWGG 61
G + D+ D NKS +I+ + + ++V D ++G+ L+GH+ V + + +
Sbjct: 268 GNILDMAVTHD--NKS--VIAATSSN-NLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSS 322
Query: 62 ATVLSGSHDRTVRFWDLRTRGCTNVL 87
V+S ++DRT++ WDL CTN +
Sbjct: 323 RHVVSAAYDRTIKLWDLHKGYCTNTV 348
>UNIPROTKB|H9L227 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9031
"Gallus gallus" [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA] [GO:0001833
"inner cell mass cell proliferation" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0008610 "lipid biosynthetic
process" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR000772
PROSITE:PS50231 GeneTree:ENSGT00700000104487 EMBL:AADN02059449
EMBL:AADN02059450 Ensembl:ENSGALT00000035741 Uniprot:H9L227
Length = 219
Score = 98 (39.6 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 23/88 (26%), Positives = 44/88 (50%)
Query: 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNW 59
+H ++ + ++ + ++ +++GGA D + V D ++ Q L GHS V S+ ++
Sbjct: 32 LHSASIPGILALDLCPSDTNKILTGGA-DKNVIVFDKSSEQILATLKGHSKKVTSVVFHP 90
Query: 60 GGATVLSGSHDRTVRFWDLRTRGCTNVL 87
V S S D T+R W + C V+
Sbjct: 91 SQDLVFSASPDATIRIWSVPNASCVQVV 118
>DICTYBASE|DDB_G0276481 [details] [associations]
symbol:ercc8 "DNA excision repair protein 8"
species:44689 "Dictyostelium discoideum" [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=ISS]
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276481 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000015 GO:GO:0006283 KO:K10570
eggNOG:NOG271357 RefSeq:XP_643081.1 ProteinModelPortal:Q551N8
STRING:Q551N8 EnsemblProtists:DDB0232366 GeneID:8620485
KEGG:ddi:DDB_G0276481 InParanoid:Q551N8 OMA:HVYETAT
ProtClustDB:CLSZ2494971 Uniprot:Q551N8
Length = 513
Score = 104 (41.7 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGAT---VLSGSHDRTV 73
N ++LLI+ D K+ + D T + L+GH VLS+ W + + + S D+T+
Sbjct: 170 NCTNLLIAAATTDPKVRLCDMRTNSSVHCLTGHRESVLSI-KWSPFSPNLIATASKDKTI 228
Query: 74 RFWDLRTRGCT 84
R WD+R RG T
Sbjct: 229 RLWDIR-RGDT 238
>CGD|CAL0005566 [details] [associations]
symbol:UTP21 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0032040 "small-subunit
processome" evidence=IDA] [GO:0034388 "Pwp2p-containing subcomplex
of 90S preribosome" evidence=IEA] [GO:0005816 "spindle pole body"
evidence=IEA] [GO:0032153 "cell division site" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0005566
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACQ01000008
EMBL:AACQ01000007 GO:GO:0006364 GO:GO:0032040 KO:K14554
RefSeq:XP_722467.1 RefSeq:XP_722608.1 ProteinModelPortal:Q5ALL2
STRING:Q5ALL2 GeneID:3635757 GeneID:3635913 KEGG:cal:CaO19.1566
KEGG:cal:CaO19.9139 Uniprot:Q5ALL2
Length = 942
Score = 107 (42.7 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
+KSS L++ D I V D T + + L GH+ + + ++ G ++S + D T+R
Sbjct: 567 HKSSDLVACALDDLSIVVIDVTTQKVIRILYGHTNRISGMDFSPDGRWIVSVALDSTLRT 626
Query: 76 WDLRTRGCTN-VLTPI 90
WDL T GC + V+ PI
Sbjct: 627 WDLPTGGCIDGVILPI 642
>UNIPROTKB|Q5ALL2 [details] [associations]
symbol:UTP21 "Putative uncharacterized protein UTP21"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0005566
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACQ01000008
EMBL:AACQ01000007 GO:GO:0006364 GO:GO:0032040 KO:K14554
RefSeq:XP_722467.1 RefSeq:XP_722608.1 ProteinModelPortal:Q5ALL2
STRING:Q5ALL2 GeneID:3635757 GeneID:3635913 KEGG:cal:CaO19.1566
KEGG:cal:CaO19.9139 Uniprot:Q5ALL2
Length = 942
Score = 107 (42.7 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
+KSS L++ D I V D T + + L GH+ + + ++ G ++S + D T+R
Sbjct: 567 HKSSDLVACALDDLSIVVIDVTTQKVIRILYGHTNRISGMDFSPDGRWIVSVALDSTLRT 626
Query: 76 WDLRTRGCTN-VLTPI 90
WDL T GC + V+ PI
Sbjct: 627 WDLPTGGCIDGVILPI 642
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 102 (41.0 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 28/82 (34%), Positives = 40/82 (48%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLY--NW 59
H G V ++ + D S+L S D + V D TG+ + L GH+ V S Y
Sbjct: 135 HSGAVMELHYNTD----GSMLFSAST-DKTVAVWDSETGERVKRLKGHTSFVNSCYPARR 189
Query: 60 GGATVLSGSHDRTVRFWDLRTR 81
G V +GS D TV+ WD+R +
Sbjct: 190 GPQLVCTGSDDGTVKLWDIRKK 211
>POMBASE|SPBPJ4664.04 [details] [associations]
symbol:SPBPJ4664.04 "coatomer alpha subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=ISO] [GO:0030126 "COPI vesicle coat" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBPJ4664.04 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 OMA:PLAADHI InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:NP_595279.1 ProteinModelPortal:Q96WV5
STRING:Q96WV5 EnsemblFungi:SPBPJ4664.04.1 GeneID:2541412
KEGG:spo:SPBPJ4664.04 OrthoDB:EOG40VZXP NextBio:20802518
Uniprot:Q96WV5
Length = 1207
Score = 108 (43.1 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 29/88 (32%), Positives = 47/88 (53%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHV-LSLYNWG 60
HDG VR + F T L +SGG D K+ V + + + +L GH +V + ++
Sbjct: 52 HDGPVRGIAF-HPTQ---PLFVSGG-DDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHE 106
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLT 88
+LS S D+T+R W+ ++R C +LT
Sbjct: 107 YPWILSCSDDQTIRIWNWQSRNCIAILT 134
>ZFIN|ZDB-GENE-020905-2 [details] [associations]
symbol:copa "coatomer protein complex, subunit alpha"
species:7955 "Danio rerio" [GO:0030117 "membrane coat"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030903 "notochord development" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-020905-2 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 GO:GO:0030903 HOGENOM:HOG000195913 InterPro:IPR016391
PIRSF:PIRSF003354 HOVERGEN:HBG005379 EMBL:AY294009 IPI:IPI00509057
UniGene:Dr.2921 ProteinModelPortal:Q6JWU9 STRING:Q6JWU9
InParanoid:Q6JWU9 NextBio:20804725 ArrayExpress:Q6JWU9
Uniprot:Q6JWU9
Length = 1226
Score = 108 (43.1 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 29/88 (32%), Positives = 45/88 (51%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHV-LSLYNWG 60
HDG VR + D + L +SGG D KI V + + L GH ++ + ++
Sbjct: 50 HDGPVRGI----DFHKQQPLFVSGG-DDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHE 104
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLT 88
+LS S D+T+R W+ ++R C VLT
Sbjct: 105 YPWILSASDDQTIRIWNWQSRTCVCVLT 132
>POMBASE|SPAC4D7.03 [details] [associations]
symbol:pop2 "F-box/WD repeat protein Pop2" species:4896
"Schizosaccharomyces pombe" [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=IPI] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC4D7.03 GO:GO:0007346 GO:GO:0005737 GO:GO:0005635
EMBL:CU329670 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0006511
GO:GO:0019005 GO:GO:0032876 KO:K03361 OrthoDB:EOG4B2X5M
EMBL:AF038867 EMBL:AF064515 PIR:T43557 RefSeq:NP_594956.1
ProteinModelPortal:O14170 IntAct:O14170 STRING:O14170
EnsemblFungi:SPAC4D7.03.1 GeneID:2543514 KEGG:spo:SPAC4D7.03
OMA:RIANMEC NextBio:20804524 Uniprot:O14170
Length = 703
Score = 105 (42.0 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 27/77 (35%), Positives = 38/77 (49%)
Query: 12 IEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLS-LYNWGGATVLSGSHD 70
+ S +L+SG D I + +TG+ L GHS + S LY +SGS D
Sbjct: 510 VRTISGYGDILVSGSY-DSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPERNICISGSMD 568
Query: 71 RTVRFWDLRTRGCTNVL 87
+++R WDL T C VL
Sbjct: 569 KSIRVWDLSTGTCKYVL 585
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 102 (41.0 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 28/82 (34%), Positives = 40/82 (48%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLY--NW 59
H G V ++ + D S+L S D + V D TG+ + L GH+ V S Y
Sbjct: 108 HSGAVMELHYNTD----GSMLFSAST-DKTVAVWDSETGERVKRLKGHTSFVNSCYPARR 162
Query: 60 GGATVLSGSHDRTVRFWDLRTR 81
G V +GS D TV+ WD+R +
Sbjct: 163 GPQLVCTGSDDGTVKLWDIRKK 184
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 104 (41.7 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
N LI G+ I V D + + L GH ++ SL ++ G V SGS D ++
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 76 WDLRTRGC 83
WD+R +GC
Sbjct: 132 WDIRRKGC 139
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 104 (41.7 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 27/84 (32%), Positives = 44/84 (52%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G V + F S L S G D ++ + D A+G ++ L GH+ ++ SL ++
Sbjct: 463 HRGPVLSLAF----SPNGKYLASAGE-DQRLKLWDLASGTLYKELRGHTDNITSLTFSPD 517
Query: 61 GATVLSGSHDRTVRFWDLRTRGCT 84
+ V S S D +VR WD+R+ C+
Sbjct: 518 SSLVASASMDNSVRVWDIRSSHCS 541
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 108 (43.1 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 15 TSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVR 74
+S S +I G+ D + V D +G L GH+ V ++ G+ V+SGS D T+R
Sbjct: 1040 SSQMSGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMH-LHGSKVVSGSRDATLR 1098
Query: 75 FWDLRTRGCTNVL 87
WD+ C +VL
Sbjct: 1099 VWDIEQGSCLHVL 1111
Score = 105 (42.0 bits), Expect = 0.00020, P = 0.00020
Identities = 23/65 (35%), Positives = 37/65 (56%)
Query: 18 KSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGH--VLSLYNWGGATVLSGSHDRTVRF 75
+ ++L+SG A D + V D TGQ Q LSG + H ++ + V++ S D TV+
Sbjct: 1204 RQNILVSGNA-DSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSRFVVTSSDDGTVKL 1262
Query: 76 WDLRT 80
WD++T
Sbjct: 1263 WDVKT 1267
Score = 103 (41.3 bits), Expect = 0.00032, P = 0.00032
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
I G+ D + V G+ + L GH+G V S G ++SGS DRT++ WD+ +
Sbjct: 1008 IVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSS-QMSGNIIISGSTDRTLKVWDMDSGA 1066
Query: 83 CTNVL 87
C + L
Sbjct: 1067 CVHTL 1071
Score = 99 (39.9 bits), Expect = 0.00085, P = 0.00085
Identities = 23/66 (34%), Positives = 33/66 (50%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTR 81
LI GA D + + + L GH+ V SL + G V+SGS D ++R WD+ T
Sbjct: 1127 LIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSL-QFDGLHVVSGSLDTSIRVWDVETG 1185
Query: 82 GCTNVL 87
C + L
Sbjct: 1186 NCKHTL 1191
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 104 (41.7 bits), Expect = 0.00010, P = 0.00010
Identities = 27/79 (34%), Positives = 40/79 (50%)
Query: 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATV 64
VR + F D L++G D +I + D +T + SGH + SL ++ G +
Sbjct: 363 VRTIAFSPD----GKYLVTG-TEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFI 417
Query: 65 LSGSHDRTVRFWDLRTRGC 83
+SGS DRT R WD+ T C
Sbjct: 418 VSGSGDRTARLWDVETGQC 436
>UNIPROTKB|H9L3L2 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000040760 Uniprot:H9L3L2
Length = 1134
Score = 107 (42.7 bits), Expect = 0.00010, P = 0.00010
Identities = 29/88 (32%), Positives = 45/88 (51%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHV-LSLYNWG 60
HDG VR + D + L +SGG D KI V + + L GH ++ + ++
Sbjct: 50 HDGPVRGI----DFHKQQPLFVSGG-DDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHE 104
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLT 88
+LS S D+T+R W+ ++R C VLT
Sbjct: 105 YPWILSASDDQTIRVWNWQSRTCVCVLT 132
>MGI|MGI:1341200 [details] [associations]
symbol:Pwp2 "PWP2 periodic tryptophan protein homolog
(yeast)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1341200 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 CTD:5822 HOVERGEN:HBG030681
OrthoDB:EOG4R7V93 EMBL:AK088254 EMBL:AK088983 IPI:IPI00469755
RefSeq:NP_083822.1 RefSeq:XP_003946476.1 UniGene:Mm.103522
ProteinModelPortal:Q8BU03 SMR:Q8BU03 STRING:Q8BU03
PhosphoSite:Q8BU03 PRIDE:Q8BU03 Ensembl:ENSMUST00000042556
GeneID:110816 KEGG:mmu:110816 InParanoid:Q8BU03 ChiTaRS:PWP2
NextBio:364713 Bgee:Q8BU03 CleanEx:MM_PWP2 Genevestigator:Q8BU03
GermOnline:ENSMUSG00000032834 Uniprot:Q8BU03
Length = 919
Score = 106 (42.4 bits), Expect = 0.00010, P = 0.00010
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 10 CFIEDTSNKSSLLISGGAGDC-KIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSG 67
C D+S + ++S GA D +I+V TG+ LSGH G V L +N + + S
Sbjct: 463 CVAVDSSGE---IVSAGAQDSFEIFVWSMQTGRLLDVLSGHEGPVSGLCFNPMKSILASA 519
Query: 68 SHDRTVRFWDL 78
S D+TVR WD+
Sbjct: 520 SWDKTVRLWDM 530
>TAIR|locus:2047635 [details] [associations]
symbol:DWA1 "AT2G19430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009788
"negative regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0016567 "protein ubiquitination" evidence=IMP]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=IMP] [GO:0031047 "gene silencing by RNA" evidence=IMP]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009738 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016567 GO:GO:0009788 EMBL:AC005917 GO:GO:0010267
GO:GO:0080008 EMBL:AC003058 EMBL:AY099718 EMBL:AY128879
IPI:IPI00545735 PIR:T01291 RefSeq:NP_849989.1 UniGene:At.39844
ProteinModelPortal:Q8L4M1 SMR:Q8L4M1 IntAct:Q8L4M1 STRING:Q8L4M1
PRIDE:Q8L4M1 EnsemblPlants:AT2G19430.1 GeneID:816462
KEGG:ath:AT2G19430 GeneFarm:2876 TAIR:At2g19430
HOGENOM:HOG000005932 InParanoid:Q8L4M1 KO:K13175 OMA:AYCWDVE
PhylomeDB:Q8L4M1 ProtClustDB:CLSN2690792 Genevestigator:Q8L4M1
Uniprot:Q8L4M1
Length = 367
Score = 101 (40.6 bits), Expect = 0.00010, P = 0.00010
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 27 AGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGAT-VLSGSHDRTVRFWDLRTRGCTN 85
AGD Y D +G+ GHS ++ ++ + A+ +L+GS D T R WD +T C
Sbjct: 178 AGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVK 237
Query: 86 VL 87
V+
Sbjct: 238 VI 239
>UNIPROTKB|H9KZL3 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030157
"pancreatic juice secretion" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000014909 OMA:ENSVLLC Uniprot:H9KZL3
Length = 1169
Score = 107 (42.7 bits), Expect = 0.00010, P = 0.00010
Identities = 29/88 (32%), Positives = 45/88 (51%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHV-LSLYNWG 60
HDG VR + D + L +SGG D KI V + + L GH ++ + ++
Sbjct: 50 HDGPVRGI----DFHKQQPLFVSGG-DDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHE 104
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLT 88
+LS S D+T+R W+ ++R C VLT
Sbjct: 105 YPWILSASDDQTIRVWNWQSRTCVCVLT 132
>UNIPROTKB|F1PU93 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:AAEX03018465
EMBL:AAEX03018466 Ensembl:ENSCAFT00000019919 Uniprot:F1PU93
Length = 1214
Score = 107 (42.7 bits), Expect = 0.00011, P = 0.00011
Identities = 29/88 (32%), Positives = 45/88 (51%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHV-LSLYNWG 60
HDG VR + D + L +SGG D KI V + + L GH ++ + ++
Sbjct: 40 HDGPVRGI----DFHKQQPLFVSGG-DDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHE 94
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLT 88
+LS S D+T+R W+ ++R C VLT
Sbjct: 95 YPWILSASDDQTIRVWNWQSRTCVCVLT 122
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 104 (41.7 bits), Expect = 0.00011, P = 0.00011
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
N LI G+ I V D + + L GH ++ SL ++ G V SGS D ++
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 76 WDLRTRGC 83
WD+R +GC
Sbjct: 132 WDIRRKGC 139
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 104 (41.7 bits), Expect = 0.00011, P = 0.00011
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
N LI G+ I V D + + L GH ++ SL ++ G V SGS D ++
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 76 WDLRTRGC 83
WD+R +GC
Sbjct: 132 WDIRRKGC 139
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 104 (41.7 bits), Expect = 0.00011, P = 0.00011
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
N LI G+ I V D + + L GH ++ SL ++ G V SGS D ++
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 76 WDLRTRGC 83
WD+R +GC
Sbjct: 132 WDIRRKGC 139
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 104 (41.7 bits), Expect = 0.00011, P = 0.00011
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
N LI G+ I V D + + L GH ++ SL ++ G V SGS D ++
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 76 WDLRTRGC 83
WD+R +GC
Sbjct: 132 WDIRRKGC 139
>UNIPROTKB|Q27954 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
[GO:0030126 "COPI vesicle coat" evidence=IDA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=TAS] [GO:0030157
"pancreatic juice secretion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005179 "hormone activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030157 GO:GO:0006891 GO:GO:0030126
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 EMBL:X96768 EMBL:BC153251 IPI:IPI00904110
RefSeq:NP_001099115.1 UniGene:Bt.76408 PDB:3MKR PDBsum:3MKR
ProteinModelPortal:Q27954 IntAct:Q27954 STRING:Q27954 PRIDE:Q27954
Ensembl:ENSBTAT00000005672 GeneID:100126041 KEGG:bta:100126041
CTD:1314 GeneTree:ENSGT00600000084501 HOVERGEN:HBG005379
EvolutionaryTrace:Q27954 NextBio:20788926 Uniprot:Q27954
Length = 1224
Score = 107 (42.7 bits), Expect = 0.00011, P = 0.00011
Identities = 29/88 (32%), Positives = 45/88 (51%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHV-LSLYNWG 60
HDG VR + D + L +SGG D KI V + + L GH ++ + ++
Sbjct: 50 HDGPVRGI----DFHKQQPLFVSGG-DDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHE 104
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLT 88
+LS S D+T+R W+ ++R C VLT
Sbjct: 105 YPWILSASDDQTIRVWNWQSRTCVCVLT 132
>UNIPROTKB|P53621 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005179 "hormone activity" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=ISS;IDA] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030157
"pancreatic juice secretion" evidence=IDA] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005829
GO:GO:0006886 GO:GO:0005615 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 EMBL:CH471121
Pathway_Interaction_DB:arf_3pathway GO:GO:0030126 GO:GO:0048205
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 HOVERGEN:HBG005379 OMA:FWVLGAH
EMBL:U24105 EMBL:AL513282 EMBL:AL445230 EMBL:BC038447
IPI:IPI00295857 IPI:IPI00646493 PIR:JC4668 RefSeq:NP_001091868.1
RefSeq:NP_004362.2 UniGene:Hs.162121 UniGene:Hs.685025
ProteinModelPortal:P53621 SMR:P53621 IntAct:P53621
MINT:MINT-1144184 STRING:P53621 PhosphoSite:P53621 DMDM:205371746
PaxDb:P53621 PRIDE:P53621 Ensembl:ENST00000241704
Ensembl:ENST00000368069 GeneID:1314 KEGG:hsa:1314 UCSC:uc001fvv.4
UCSC:uc009wti.3 GeneCards:GC01M160258 HGNC:HGNC:2230 HPA:HPA028024
MIM:601924 neXtProt:NX_P53621 PharmGKB:PA26746 PhylomeDB:P53621
ChiTaRS:COPA GenomeRNAi:1314 NextBio:5373 Bgee:P53621
CleanEx:HS_COPA Genevestigator:P53621 GermOnline:ENSG00000122218
Uniprot:P53621
Length = 1224
Score = 107 (42.7 bits), Expect = 0.00011, P = 0.00011
Identities = 29/88 (32%), Positives = 45/88 (51%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHV-LSLYNWG 60
HDG VR + D + L +SGG D KI V + + L GH ++ + ++
Sbjct: 50 HDGPVRGI----DFHKQQPLFVSGG-DDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHE 104
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLT 88
+LS S D+T+R W+ ++R C VLT
Sbjct: 105 YPWILSASDDQTIRVWNWQSRTCVCVLT 132
>UNIPROTKB|F1RJX8 [details] [associations]
symbol:COPA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030157 "pancreatic juice secretion" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030157 GO:GO:0030126 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH
EMBL:CU207285 RefSeq:XP_001928742.1 UniGene:Ssc.96897
Ensembl:ENSSSCT00000006999 GeneID:100157296 KEGG:ssc:100157296
Uniprot:F1RJX8
Length = 1224
Score = 107 (42.7 bits), Expect = 0.00011, P = 0.00011
Identities = 29/88 (32%), Positives = 45/88 (51%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHV-LSLYNWG 60
HDG VR + D + L +SGG D KI V + + L GH ++ + ++
Sbjct: 50 HDGPVRGI----DFHKQQPLFVSGG-DDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHE 104
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLT 88
+LS S D+T+R W+ ++R C VLT
Sbjct: 105 YPWILSASDDQTIRVWNWQSRTCVCVLT 132
>MGI|MGI:1334462 [details] [associations]
symbol:Copa "coatomer protein complex subunit alpha"
species:10090 "Mus musculus" [GO:0005179 "hormone activity"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0030157 "pancreatic juice
secretion" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1334462 GO:GO:0006886
GO:GO:0005615 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 GO:GO:0030126
HSSP:P63005 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501
HOVERGEN:HBG005379 ChiTaRS:COPA EMBL:AC158930 EMBL:BC024070
EMBL:BC047429 IPI:IPI00229834 RefSeq:NP_034068.3 UniGene:Mm.30041
ProteinModelPortal:Q8CIE6 SMR:Q8CIE6 IntAct:Q8CIE6 STRING:Q8CIE6
PhosphoSite:Q8CIE6 PaxDb:Q8CIE6 PRIDE:Q8CIE6
Ensembl:ENSMUST00000135192 GeneID:12847 KEGG:mmu:12847
UCSC:uc007dpn.2 InParanoid:Q8CIE6 NextBio:282392 Bgee:Q8CIE6
Genevestigator:Q8CIE6 Uniprot:Q8CIE6
Length = 1224
Score = 107 (42.7 bits), Expect = 0.00011, P = 0.00011
Identities = 29/88 (32%), Positives = 45/88 (51%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHV-LSLYNWG 60
HDG VR + D + L +SGG D KI V + + L GH ++ + ++
Sbjct: 50 HDGPVRGI----DFHKQQPLFVSGG-DDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHE 104
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLT 88
+LS S D+T+R W+ ++R C VLT
Sbjct: 105 YPWILSASDDQTIRVWNWQSRTCVCVLT 132
>UNIPROTKB|G3V6T1 [details] [associations]
symbol:Copa "Protein Copa" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0030157 "pancreatic juice
secretion" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310525 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:CH473985
RefSeq:NP_001128012.1 UniGene:Rn.203109 ProteinModelPortal:G3V6T1
PRIDE:G3V6T1 Ensembl:ENSRNOT00000008518 GeneID:304978
KEGG:rno:304978 NextBio:653932 Uniprot:G3V6T1
Length = 1224
Score = 107 (42.7 bits), Expect = 0.00011, P = 0.00011
Identities = 29/88 (32%), Positives = 45/88 (51%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHV-LSLYNWG 60
HDG VR + D + L +SGG D KI V + + L GH ++ + ++
Sbjct: 50 HDGPVRGI----DFHKQQPLFVSGG-DDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHE 104
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLT 88
+LS S D+T+R W+ ++R C VLT
Sbjct: 105 YPWILSASDDQTIRVWNWQSRTCVCVLT 132
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 104 (41.7 bits), Expect = 0.00011, P = 0.00011
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
N LI G+ I V D + + L GH ++ SL ++ G V SGS D ++
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 76 WDLRTRGC 83
WD+R +GC
Sbjct: 132 WDIRRKGC 139
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 101 (40.6 bits), Expect = 0.00012, P = 0.00012
Identities = 23/74 (31%), Positives = 36/74 (48%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLS-LYNWGGATVLSGSHDRTVR 74
S K + G+ D I + D + G L GH V L + GG ++S + D+T+R
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLR 363
Query: 75 FWDLRTRGCTNVLT 88
WD + + CT L+
Sbjct: 364 IWDYKNKRCTKTLS 377
>UNIPROTKB|Q15269 [details] [associations]
symbol:PWP2 "Periodic tryptophan protein 2 homolog"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471079 GO:GO:0004871
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AP001753 EMBL:AB001517
HOGENOM:HOG000160363 KO:K14558 OMA:VWQCDTP InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003 EMBL:X95263
EMBL:X96424 EMBL:X96425 EMBL:U53346 EMBL:U56085 EMBL:U56089
EMBL:U56086 EMBL:U56087 EMBL:U56088 EMBL:AK314184 EMBL:BC013309
EMBL:BC014988 EMBL:AB001523 IPI:IPI00300078 RefSeq:NP_005040.2
UniGene:Hs.449076 ProteinModelPortal:Q15269 SMR:Q15269
IntAct:Q15269 MINT:MINT-1411448 STRING:Q15269 PhosphoSite:Q15269
DMDM:116242740 SWISS-2DPAGE:Q15269 PaxDb:Q15269 PeptideAtlas:Q15269
PRIDE:Q15269 DNASU:5822 Ensembl:ENST00000291576 GeneID:5822
KEGG:hsa:5822 UCSC:uc002zeb.3 CTD:5822 GeneCards:GC21P045527
H-InvDB:HIX0213175 HGNC:HGNC:9711 HPA:HPA024573 MIM:601475
neXtProt:NX_Q15269 PharmGKB:PA162400451 HOVERGEN:HBG030681
InParanoid:Q15269 OrthoDB:EOG4R7V93 PhylomeDB:Q15269
GenomeRNAi:5822 NextBio:22681 ArrayExpress:Q15269 Bgee:Q15269
CleanEx:HS_PWP2 Genevestigator:Q15269 GermOnline:ENSG00000160220
Uniprot:Q15269
Length = 919
Score = 105 (42.0 bits), Expect = 0.00013, P = 0.00013
Identities = 26/71 (36%), Positives = 38/71 (53%)
Query: 10 CFIEDTSNKSSLLISGGAGDC-KIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSG 67
C D S + ++S GA D +I+V TG+ LSGH G + L +N + + S
Sbjct: 463 CVAVDASGE---IVSAGAQDSFEIFVWSMQTGRLLDVLSGHEGPISGLCFNPMKSVLASA 519
Query: 68 SHDRTVRFWDL 78
S D+TVR WD+
Sbjct: 520 SWDKTVRLWDM 530
>RGD|1582817 [details] [associations]
symbol:Pwp2 "PWP2 periodic tryptophan protein homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005730 "nucleolus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1582817 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 KO:K14558
InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 CTD:5822 OrthoDB:EOG4R7V93 IPI:IPI00372838
RefSeq:NP_001162124.1 UniGene:Rn.208019 ProteinModelPortal:D3ZV54
PRIDE:D3ZV54 Ensembl:ENSRNOT00000001605 GeneID:690297
KEGG:rno:690297 UCSC:RGD:1582817 NextBio:740604 Uniprot:D3ZV54
Length = 920
Score = 105 (42.0 bits), Expect = 0.00013, P = 0.00013
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 10 CFIEDTSNKSSLLISGGAGDC-KIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSG 67
C D+S + ++S GA D +I+V TG+ LSGH G + L +N + + S
Sbjct: 465 CVAVDSSGE---IVSAGAQDSFEIFVWSMQTGRLLDVLSGHEGPISGLCFNPMKSILASA 521
Query: 68 SHDRTVRFWDL 78
S D+TVR WD+
Sbjct: 522 SWDKTVRLWDM 532
>CGD|CAL0003392 [details] [associations]
symbol:PWP2 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030515 "snoRNA
binding" evidence=IEA] [GO:0034388 "Pwp2p-containing subcomplex of
90S preribosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030010 "establishment of cell polarity" evidence=IEA]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 105 (42.0 bits), Expect = 0.00013, P = 0.00013
Identities = 28/85 (32%), Positives = 45/85 (52%)
Query: 10 CFIEDTSNKSSLLISGGAGDC-KIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSG 67
C D S + +I GG+ D +IYV TGQ +L+GH G + L + + + S
Sbjct: 429 CLAVDPSGE---VIVGGSQDTFEIYVWSVQTGQLLDSLTGHEGPISCLTFGKENSILASA 485
Query: 68 SHDRTVRFWDLRTRGCTNVLTPITV 92
S D+T+R W++ +R T + PI +
Sbjct: 486 SWDKTIRIWNIFSRNQT--VEPIEI 508
>UNIPROTKB|Q5A852 [details] [associations]
symbol:PWP2 "Putative uncharacterized protein PWP2"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 105 (42.0 bits), Expect = 0.00013, P = 0.00013
Identities = 28/85 (32%), Positives = 45/85 (52%)
Query: 10 CFIEDTSNKSSLLISGGAGDC-KIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSG 67
C D S + +I GG+ D +IYV TGQ +L+GH G + L + + + S
Sbjct: 429 CLAVDPSGE---VIVGGSQDTFEIYVWSVQTGQLLDSLTGHEGPISCLTFGKENSILASA 485
Query: 68 SHDRTVRFWDLRTRGCTNVLTPITV 92
S D+T+R W++ +R T + PI +
Sbjct: 486 SWDKTIRIWNIFSRNQT--VEPIEI 508
>UNIPROTKB|G4MXN3 [details] [associations]
symbol:MGG_01259 "Pre-mRNA splicing factor" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 KO:K12662 RefSeq:XP_003714171.1
ProteinModelPortal:G4MXN3 EnsemblFungi:MGG_01259T0 GeneID:2679643
KEGG:mgr:MGG_01259 Uniprot:G4MXN3
Length = 531
Score = 102 (41.0 bits), Expect = 0.00013, P = 0.00013
Identities = 30/84 (35%), Positives = 41/84 (48%)
Query: 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGH-SGHVLSLY-- 57
+ +G R V F + SLL S G D + D TG+ L GH GH+ +Y
Sbjct: 338 LQEGHSRGV-FAVSFNGDGSLLASAGQ-DSIGRIWDLRTGRTIMILDGHMDGHIKPIYAL 395
Query: 58 NWG--GATVLSGSHDRTVRFWDLR 79
+WG G VLS S D ++ WD+R
Sbjct: 396 DWGSDGHRVLSASADGWIKCWDVR 419
Score = 95 (38.5 bits), Expect = 0.00076, P = 0.00076
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 20 SLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFW 76
+ L+S G D K+ + Q+LSGH+G V S+ + G ++SG HDRTV+ W
Sbjct: 467 TFLVSSGF-DHKVNIYSADDWALVQSLSGHTGPVASVDVSRDGRWIVSGGHDRTVKLW 523
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 103 (41.3 bits), Expect = 0.00014, P = 0.00014
Identities = 23/69 (33%), Positives = 37/69 (53%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVR 74
S K L+++G I V D + + L GH ++ SL ++ G+ V SGS D ++
Sbjct: 72 SAKEELIVAGSQSG-SIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIK 130
Query: 75 FWDLRTRGC 83
WD+R +GC
Sbjct: 131 LWDVRRKGC 139
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 103 (41.3 bits), Expect = 0.00014, P = 0.00014
Identities = 23/69 (33%), Positives = 37/69 (53%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVR 74
S K L+++G I V D + + L GH ++ SL ++ G+ V SGS D ++
Sbjct: 71 SAKEELIVAGSQSG-SIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIK 129
Query: 75 FWDLRTRGC 83
WD+R +GC
Sbjct: 130 LWDVRRKGC 138
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 103 (41.3 bits), Expect = 0.00014, P = 0.00014
Identities = 23/69 (33%), Positives = 37/69 (53%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVR 74
S K L+++G I V D + + L GH ++ SL ++ G+ V SGS D ++
Sbjct: 72 SAKEELIVAGSQSG-SIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIK 130
Query: 75 FWDLRTRGC 83
WD+R +GC
Sbjct: 131 LWDVRRKGC 139
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 103 (41.3 bits), Expect = 0.00014, P = 0.00014
Identities = 23/69 (33%), Positives = 37/69 (53%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVR 74
S K L+++G I V D + + L GH ++ SL ++ G+ V SGS D ++
Sbjct: 72 SAKEELIVAGSQSG-SIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIK 130
Query: 75 FWDLRTRGC 83
WD+R +GC
Sbjct: 131 LWDVRRKGC 139
>FB|FBgn0025725 [details] [associations]
symbol:alphaCop "alpha-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=ISS;NAS] [GO:0030126 "COPI vesicle
coat" evidence=ISS;NAS] [GO:0016192 "vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0010883 "regulation of lipid storage" evidence=IDA] [GO:0000902
"cell morphogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0006911 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000902 GO:GO:0030126 GO:GO:0010883
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AJ011114
ProteinModelPortal:O77285 SMR:O77285 STRING:O77285 PaxDb:O77285
PRIDE:O77285 FlyBase:FBgn0025725 InParanoid:O77285
OrthoDB:EOG4CFXQ2 ChiTaRS:alphaCop ArrayExpress:O77285 Bgee:O77285
Uniprot:O77285
Length = 1234
Score = 106 (42.4 bits), Expect = 0.00014, P = 0.00014
Identities = 30/88 (34%), Positives = 46/88 (52%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
HDG VR V F + + L +SGG D KI V + + L H +V ++ ++
Sbjct: 50 HDGPVRGVAFHQ----QMPLFVSGG-DDYKIKVWNYKQRRCIFTLLAHLDYVRTVAFHHE 104
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLT 88
+LS S D+T+R W+ ++R C VLT
Sbjct: 105 YPWILSASDDQTIRIWNWQSRNCICVLT 132
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 103 (41.3 bits), Expect = 0.00014, P = 0.00014
Identities = 25/65 (38%), Positives = 32/65 (49%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
I G D I + D + LSGH+G VL L + ++SGS D TVR WD+ T
Sbjct: 235 IVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCL-QYDNRVIISGSSDATVRVWDVETGE 293
Query: 83 CTNVL 87
C L
Sbjct: 294 CIKTL 298
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 103 (41.3 bits), Expect = 0.00014, P = 0.00014
Identities = 25/65 (38%), Positives = 32/65 (49%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
I G D I + D + LSGH+G VL L + ++SGS D TVR WD+ T
Sbjct: 235 IVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCL-QYDNRVIISGSSDATVRVWDVETGE 293
Query: 83 CTNVL 87
C L
Sbjct: 294 CIKTL 298
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 103 (41.3 bits), Expect = 0.00014, P = 0.00014
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTR 81
+++ G+ D I + D TG+ + L GH + L + ++SGS DRT++ W+ RT
Sbjct: 361 ILATGSYDTTIKIWDTETGEELRTLRGHESGIRCL-QFDDTKLISGSMDRTIKVWNWRTG 419
Query: 82 GCTNVLT 88
C + T
Sbjct: 420 ECISTYT 426
>WB|WBGene00001679 [details] [associations]
symbol:gpb-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0040013 "negative
regulation of locomotion" evidence=IMP] [GO:0046662 "regulation of
oviposition" evidence=IMP] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0009792 GO:GO:0000132
GO:GO:0035046 GO:GO:0018991 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0040013 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0004871
GO:GO:0046662 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 OMA:CMLWDIE
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X17497 EMBL:AF291846
EMBL:Z49127 PIR:S09591 PIR:T20830 RefSeq:NP_001254312.1
UniGene:Cel.6600 ProteinModelPortal:P17343 SMR:P17343 STRING:P17343
PaxDb:P17343 PRIDE:P17343 EnsemblMetazoa:F13D12.7a.1
EnsemblMetazoa:F13D12.7a.2 EnsemblMetazoa:F13D12.7a.3 GeneID:174803
KEGG:cel:CELE_F13D12.7 UCSC:F13D12.7.1 CTD:174803
WormBase:F13D12.7a InParanoid:P17343 KO:K07972 NextBio:885576
ArrayExpress:P17343 Uniprot:P17343
Length = 340
Score = 99 (39.9 bits), Expect = 0.00015, P = 0.00015
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G + F++D + ++ S G C ++ D TGQ A +GH+G V+SL +
Sbjct: 142 HTGYLSCCRFLDD----NQIVTSSGDMTCALW--DIETGQQCTAFTGHTGDVMSLSLSPD 195
Query: 61 GATVLSGSHDRTVRFWDLRTRGC 83
T +SG+ D + + WD+R C
Sbjct: 196 FRTFISGACDASAKLWDIRDGMC 218
>UNIPROTKB|Q70M86 [details] [associations]
symbol:pro11 "Striatin Pro11" species:771870 "Sordaria
macrospora k-hell" [GO:0000909 "sporocarp development involved in
sexual reproduction" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016020 "membrane" evidence=IDA] [GO:0030154 "cell
differentiation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030154 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000909 InterPro:IPR013258
Pfam:PF08232 EMBL:AJ564211 EMBL:CABT02000015 RefSeq:XP_003345440.1
ProteinModelPortal:Q70M86 GeneID:10802793 KEGG:smp:SMAC_08794
Uniprot:Q70M86
Length = 845
Score = 104 (41.7 bits), Expect = 0.00015, P = 0.00015
Identities = 27/74 (36%), Positives = 36/74 (48%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVR 74
S +ISG D I D +GQ + H G V SL + G ++S HD ++R
Sbjct: 737 SGVEGTIISGHE-DRYIRFFDANSGQCTYNMLAHPGSVSSLSLSPDGRELVSAGHDMSLR 795
Query: 75 FWDLRTRGCTNVLT 88
FW L TR CT +T
Sbjct: 796 FWSLETRSCTQEMT 809
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 99 (39.9 bits), Expect = 0.00015, P = 0.00015
Identities = 25/70 (35%), Positives = 38/70 (54%)
Query: 17 NKSSLLISGGAGDCKIYVT----DCATGQAFQALSGHSGHVLSLYNW--GGATVLSGSHD 70
N + LI+ G+ D +I++ DC F L GH +L L+ W G+ ++S S D
Sbjct: 62 NPAGTLIASGSHDREIFLWRVHGDCKN---FMVLKGHKNAILDLH-WTSDGSQIVSASPD 117
Query: 71 RTVRFWDLRT 80
+TVR WD+ T
Sbjct: 118 KTVRAWDVET 127
>UNIPROTKB|Q4R2Z6 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9541
"Macaca fascicularis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764
GO:GO:0016579 InterPro:IPR021772 Pfam:PF11816 HOVERGEN:HBG079413
EMBL:AB179472 ProteinModelPortal:Q4R2Z6 PRIDE:Q4R2Z6 Uniprot:Q4R2Z6
Length = 622
Score = 89 (36.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLY-NWGGATVLSGSHDRTVRF 75
N+ +I G+ + + V D T L GH+ +V +L N G LSGS D T+R
Sbjct: 177 NQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRL 236
Query: 76 WDLRTRGC 83
W L + C
Sbjct: 237 WSLGQQRC 244
Score = 35 (17.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 83 CTNVLTPI-TVP 93
CTN +TP+ T P
Sbjct: 342 CTNPITPLCTQP 353
>POMBASE|SPBC887.04c [details] [associations]
symbol:lub1 "WD repeat protein Lub1" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006281 "DNA repair" evidence=ISS]
[GO:0016574 "histone ubiquitination" evidence=NAS] [GO:0033554
"cellular response to stress" evidence=IMP] [GO:0043130 "ubiquitin
binding" evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0043234 "protein
complex" evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC887.04c GO:GO:0005634 GO:GO:0005737
GO:GO:0043234 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 EMBL:CU329671 GO:GO:0006281 eggNOG:COG2319
GenomeReviews:CU329671_GR GO:GO:0043130 GO:GO:0016574
HOGENOM:HOG000174247 OrthoDB:EOG4MGWGM InterPro:IPR015155
InterPro:IPR013535 Pfam:PF09070 Pfam:PF08324 PROSITE:PS51394
PROSITE:PS51396 PIR:T40729 RefSeq:NP_596478.2 STRING:O94289
GeneID:2541208 NextBio:20802320 Uniprot:O94289
Length = 718
Score = 103 (41.3 bits), Expect = 0.00016, P = 0.00016
Identities = 24/78 (30%), Positives = 35/78 (44%)
Query: 2 HDGTVRDVCFIEDTS-NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWG 60
H+G V VC++ N + SGG C I + + T L GH ++ S
Sbjct: 55 HEGFVNCVCYVPAIDKNSRGYIFSGGQDKCGI-LQEVGTNSPSYYLFGHESNICSASALN 113
Query: 61 GATVLSGSHDRTVRFWDL 78
T+++GS D T R W L
Sbjct: 114 SETIITGSWDSTARVWAL 131
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 101 (40.6 bits), Expect = 0.00016, P = 0.00016
Identities = 25/65 (38%), Positives = 32/65 (49%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
I G D I + D Q + L GH+G VL L + ++SGS D TVR WD+ T
Sbjct: 223 IVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCL-QYDDKVIISGSSDSTVRVWDVNTGE 281
Query: 83 CTNVL 87
N L
Sbjct: 282 MVNTL 286
>MGI|MGI:2158400 [details] [associations]
symbol:Wdr18 "WD repeat domain 18" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2158400 GO:GO:0007275
GO:GO:0005737 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00390000000289
CTD:57418 HOGENOM:HOG000046506 HOVERGEN:HBG059735 OMA:KQCIRTV
OrthoDB:EOG4PZJ6K InterPro:IPR026987 Pfam:PF14077 EMBL:AK133716
EMBL:AK160713 EMBL:AK168691 EMBL:BC095984 IPI:IPI00136252
RefSeq:NP_780659.2 UniGene:Mm.35828 ProteinModelPortal:Q4VBE8
SMR:Q4VBE8 STRING:Q4VBE8 PhosphoSite:Q4VBE8 PaxDb:Q4VBE8
PRIDE:Q4VBE8 Ensembl:ENSMUST00000045247 GeneID:216156
KEGG:mmu:216156 UCSC:uc007gat.1 InParanoid:Q4VBE8 NextBio:375024
Bgee:Q4VBE8 CleanEx:MM_WDR18 Genevestigator:Q4VBE8
GermOnline:ENSMUSG00000035754 Uniprot:Q4VBE8
Length = 431
Score = 100 (40.3 bits), Expect = 0.00017, P = 0.00017
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 39 TGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLT---PIT 91
TG+ F+ GH V L + G+ +LSGSHD +VR WD++++ C +T P+T
Sbjct: 261 TGKVFK---GHRNQVTCLSVSTDGSVLLSGSHDESVRLWDVKSKQCLRTVTLKGPVT 314
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 101 (40.6 bits), Expect = 0.00017, P = 0.00017
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWG--GATVLSGSHDRTV 73
S SS ++ G+GD + D TG L GH+G VL + +W G + + S D+TV
Sbjct: 161 SPASSARLATGSGDNTARIWDAETGTPKHTLKGHAGWVLGV-SWSPDGTRLATCSMDKTV 219
Query: 74 RFWDLRT 80
R WD T
Sbjct: 220 RIWDPET 226
>TAIR|locus:2123929 [details] [associations]
symbol:VIP3 "AT4G29830" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009910 "negative regulation
of flower development" evidence=IGI;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=IPI] [GO:0010452 "histone H3-K36 methylation"
evidence=IMP] [GO:0051568 "histone H3-K4 methylation" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AL050352 EMBL:AL161575
GO:GO:0009910 GO:GO:0051568 HSSP:P16649 GO:GO:0080008 GO:GO:0010452
UniGene:At.23602 UniGene:At.72983 HOGENOM:HOG000036765 KO:K12602
OMA:PPSEVWG EMBL:BT008333 IPI:IPI00518529 PIR:T08544
RefSeq:NP_194712.1 SMR:Q9SZQ5 IntAct:Q9SZQ5 STRING:Q9SZQ5
EnsemblPlants:AT4G29830.1 GeneID:829105 KEGG:ath:AT4G29830
TAIR:At4g29830 InParanoid:Q9SZQ5 ProtClustDB:CLSN2685393
Genevestigator:Q9SZQ5 Uniprot:Q9SZQ5
Length = 321
Score = 98 (39.6 bits), Expect = 0.00017, P = 0.00017
Identities = 26/88 (29%), Positives = 43/88 (48%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H+ VR + F S ++ G+ D + + D ++SGH+ VLS+ +
Sbjct: 199 HNMPVRSLVF----SPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPD 254
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLT 88
G + +GS DRTVR WDL+ R ++
Sbjct: 255 GGAIATGSSDRTVRLWDLKMRAAIQTMS 282
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 107 (42.7 bits), Expect = 0.00018, P = 0.00018
Identities = 27/80 (33%), Positives = 42/80 (52%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H+ V+ V F D S L++ + D + + D ATG + L GH+ V S+ ++
Sbjct: 304 HNEWVKSVVFSHD-----SRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHD 358
Query: 61 GATVLSGSHDRTVRFWDLRT 80
+ SGS+DRTVR W+ T
Sbjct: 359 SRLIASGSNDRTVRIWETTT 378
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 98 (39.6 bits), Expect = 0.00018, P = 0.00018
Identities = 28/91 (30%), Positives = 39/91 (42%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H VR +CF + N LL + G K+Y D LSGH+ VL + ++
Sbjct: 211 HAMPVRSLCF---SPNSQLLLTASDDGHMKLY--DVTHSDVVGTLSGHASWVLCVAFSED 265
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLTPIT 91
G S S D +V+ WD R C + T
Sbjct: 266 GKHFASSSSDNSVKIWDTSERKCLHTFAEHT 296
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 98 (39.6 bits), Expect = 0.00018, P = 0.00018
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
N S LI G+ D I + + TG+ + + HS + S+ +N G+ ++S SHD + +
Sbjct: 137 NPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKI 196
Query: 76 WDLRTRGCTNVL 87
WD + C L
Sbjct: 197 WDAKEGTCLKTL 208
Score = 97 (39.2 bits), Expect = 0.00023, P = 0.00023
Identities = 22/94 (23%), Positives = 45/94 (47%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATG-QAFQALSGHSGHVLSL-YNW 59
H + D+ + D+ S + DC + + D + + + L GH+ V + +N
Sbjct: 84 HSSGISDLAWSSDSHYTCS-----ASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNP 138
Query: 60 GGATVLSGSHDRTVRFWDLRTRGCTNVLTPITVP 93
++SGS D T+R W+++T C ++ ++P
Sbjct: 139 PSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMP 172
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 101 (40.6 bits), Expect = 0.00018, P = 0.00018
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 20 SLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDL 78
S+L++GG D V D TG+ L GH G V + ++ G + +GS D T + WDL
Sbjct: 408 SVLVTGGL-DAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDL 466
Query: 79 RTR 81
R R
Sbjct: 467 RRR 469
>UNIPROTKB|F1MV75 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9913
"Bos taurus" [GO:0016579 "protein deubiquitination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016579 InterPro:IPR021772
Pfam:PF11816 IPI:IPI00697548 UniGene:Bt.64382
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:DAAA02053659
EMBL:DAAA02053660 EMBL:DAAA02053661 Ensembl:ENSBTAT00000004876
Uniprot:F1MV75
Length = 677
Score = 89 (36.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLY-NWGGATVLSGSHDRTVRF 75
N+ +I G+ + + V D T L GH+ +V +L N G LSGS D T+R
Sbjct: 177 NQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRL 236
Query: 76 WDLRTRGC 83
W L + C
Sbjct: 237 WSLGQQRC 244
Score = 35 (17.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 83 CTNVLTPI-TVP 93
CTN +TP+ T P
Sbjct: 342 CTNPITPLCTQP 353
>UNIPROTKB|Q32PG3 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=ISS] [GO:0016579
"protein deubiquitination" evidence=ISS] [GO:0005764 "lysosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 HSSP:P63005 EMBL:BC108126
IPI:IPI00697548 RefSeq:NP_001069992.1 UniGene:Bt.64382
ProteinModelPortal:Q32PG3 STRING:Q32PG3 GeneID:618860
KEGG:bta:618860 CTD:57599 HOGENOM:HOG000007343 InParanoid:Q32PG3
OrthoDB:EOG4HHP1W NextBio:20901375 Uniprot:Q32PG3
Length = 677
Score = 89 (36.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLY-NWGGATVLSGSHDRTVRF 75
N+ +I G+ + + V D T L GH+ +V +L N G LSGS D T+R
Sbjct: 177 NQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRL 236
Query: 76 WDLRTRGC 83
W L + C
Sbjct: 237 WSLGQQRC 244
Score = 35 (17.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 83 CTNVLTPI-TVP 93
CTN +TP+ T P
Sbjct: 342 CTNPITPLCTQP 353
>UNIPROTKB|E2RJ50 [details] [associations]
symbol:WDR48 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016579 "protein deubiquitination"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:AAEX03013494
RefSeq:XP_860103.1 ProteinModelPortal:E2RJ50 SMR:E2RJ50
PRIDE:E2RJ50 Ensembl:ENSCAFT00000008168 GeneID:477027
KEGG:cfa:477027 NextBio:20852578 Uniprot:E2RJ50
Length = 677
Score = 89 (36.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLY-NWGGATVLSGSHDRTVRF 75
N+ +I G+ + + V D T L GH+ +V +L N G LSGS D T+R
Sbjct: 177 NQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRL 236
Query: 76 WDLRTRGC 83
W L + C
Sbjct: 237 WSLGQQRC 244
Score = 35 (17.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 83 CTNVLTPI-TVP 93
CTN +TP+ T P
Sbjct: 342 CTNPITPLCTQP 353
>UNIPROTKB|Q8TAF3 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9606
"Homo sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0019048 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
OrthoDB:EOG4HHP1W HOVERGEN:HBG079413 OMA:NRLYSAG EMBL:AF468833
EMBL:AB040882 EMBL:AK297349 EMBL:AK298810 EMBL:AK302307
EMBL:AL162064 EMBL:AL832926 EMBL:BX649170 EMBL:BC026353
EMBL:BC037168 IPI:IPI00658079 IPI:IPI00658210 IPI:IPI00791758
IPI:IPI00792902 IPI:IPI00937128 PIR:T47168 RefSeq:NP_065890.1
UniGene:Hs.109778 ProteinModelPortal:Q8TAF3 SMR:Q8TAF3
IntAct:Q8TAF3 STRING:Q8TAF3 PhosphoSite:Q8TAF3 DMDM:74760390
PaxDb:Q8TAF3 PeptideAtlas:Q8TAF3 PRIDE:Q8TAF3
Ensembl:ENST00000302313 Ensembl:ENST00000396258
Ensembl:ENST00000544962 GeneID:57599 KEGG:hsa:57599 UCSC:uc003cit.3
UCSC:uc011ayt.1 UCSC:uc011ayu.1 UCSC:uc011ayv.1
GeneCards:GC03P039069 HGNC:HGNC:30914 HPA:HPA038421 MIM:612167
neXtProt:NX_Q8TAF3 PharmGKB:PA134956949 InParanoid:Q8TAF3
ChiTaRS:WDR48 GenomeRNAi:57599 NextBio:64214 ArrayExpress:Q8TAF3
Bgee:Q8TAF3 CleanEx:HS_WDR48 Genevestigator:Q8TAF3
GermOnline:ENSG00000114742 Uniprot:Q8TAF3
Length = 677
Score = 89 (36.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLY-NWGGATVLSGSHDRTVRF 75
N+ +I G+ + + V D T L GH+ +V +L N G LSGS D T+R
Sbjct: 177 NQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRL 236
Query: 76 WDLRTRGC 83
W L + C
Sbjct: 237 WSLGQQRC 244
Score = 35 (17.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 83 CTNVLTPI-TVP 93
CTN +TP+ T P
Sbjct: 342 CTNPITPLCTQP 353
>UNIPROTKB|F2Z5V5 [details] [associations]
symbol:WDR48 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016579 "protein deubiquitination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016579 KO:K15361
InterPro:IPR021772 Pfam:PF11816 CTD:57599
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:CU856480
RefSeq:XP_003132167.1 UniGene:Ssc.3296 ProteinModelPortal:F2Z5V5
SMR:F2Z5V5 PRIDE:F2Z5V5 Ensembl:ENSSSCT00000012329 GeneID:100518629
KEGG:ssc:100518629 Uniprot:F2Z5V5
Length = 677
Score = 89 (36.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLY-NWGGATVLSGSHDRTVRF 75
N+ +I G+ + + V D T L GH+ +V +L N G LSGS D T+R
Sbjct: 177 NQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRL 236
Query: 76 WDLRTRGC 83
W L + C
Sbjct: 237 WSLGQQRC 244
Score = 35 (17.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 83 CTNVLTPI-TVP 93
CTN +TP+ T P
Sbjct: 342 CTNPITPLCTQP 353
>FB|FBgn0036263 [details] [associations]
symbol:thoc6 "thoc6" species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0006406 "mRNA
export from nucleus" evidence=NAS] [GO:0000347 "THO complex"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0008283 GO:GO:0009408 KO:K13175 GO:GO:0000347
CTD:79228 EMBL:AJ620303 EMBL:AY061521 RefSeq:NP_648557.1
UniGene:Dm.2827 ProteinModelPortal:Q9VTV1 SMR:Q9VTV1 PaxDb:Q9VTV1
PRIDE:Q9VTV1 EnsemblMetazoa:FBtr0076019 EnsemblMetazoa:FBtr0333384
GeneID:39394 KEGG:dme:Dmel_CG5632 UCSC:CG5632-RA
FlyBase:FBgn0036263 eggNOG:NOG287711 GeneTree:ENSGT00390000015278
InParanoid:Q9VTV1 OMA:HILKDFR OrthoDB:EOG4V15G9 PhylomeDB:Q9VTV1
GenomeRNAi:39394 NextBio:813424 Bgee:Q9VTV1 Uniprot:Q9VTV1
Length = 350
Score = 98 (39.6 bits), Expect = 0.00020, P = 0.00020
Identities = 23/77 (29%), Positives = 39/77 (50%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFW 76
+++S+L +G GD IY G+ + GH+ +V S+ + SG+ D TVR W
Sbjct: 123 SENSILFAG-CGDGVIYQVSLEDGRIQREYRGHTDYVHSVVGNANGQIFSGAEDGTVRVW 181
Query: 77 DLRTRGCTNVLTPITVP 93
+ + T++L P P
Sbjct: 182 STKQQQHTSMLEPYKNP 198
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 101 (40.6 bits), Expect = 0.00020, P = 0.00020
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 6 VRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATV 64
VR V F D ++ G D +I + D A + ++ L+GH + SL ++ G T+
Sbjct: 349 VRSVAFSPDGK-----YLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTL 403
Query: 65 LSGSHDRTVRFWDL 78
+SGS DRTV WD+
Sbjct: 404 VSGSGDRTVCLWDV 417
>POMBASE|SPBC1198.12 [details] [associations]
symbol:mfr1 "fizzy-related protein Mfr1" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0007138
"meiotic anaphase II" evidence=IMP] [GO:0030437 "ascospore
formation" evidence=IMP] [GO:0043234 "protein complex"
evidence=NAS] [GO:0051487 "activation of anaphase-promoting complex
activity involved in meiotic cell cycle" evidence=IGI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC1198.12 GO:GO:0005634 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 EMBL:CU329671 eggNOG:COG2319
GenomeReviews:CU329671_GR GO:GO:0030437 GO:GO:0007138
HOGENOM:HOG000195514 GO:GO:0051487 OrthoDB:EOG43FM5B OMA:RQINHQN
PIR:T40614 RefSeq:NP_595081.1 ProteinModelPortal:O94423
IntAct:O94423 STRING:O94423 EnsemblFungi:SPBC1198.12.1
GeneID:2540043 KEGG:spo:SPBC1198.12 NextBio:20801180 Uniprot:O94423
Length = 421
Score = 99 (39.9 bits), Expect = 0.00020, P = 0.00020
Identities = 26/84 (30%), Positives = 40/84 (47%)
Query: 1 MHD-GTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNW 59
+HD G V + T + L + +G IY+ D + ++ ++L GHS V +L W
Sbjct: 160 LHDFGATNHVTSVLWTGKGTQLAVGTDSG--VIYIWDIESTKSVRSLKGHSERVAALA-W 216
Query: 60 GGATVLSGSHDRTVRFWDLRTRGC 83
T+ SG D + DLR GC
Sbjct: 217 NDNTLTSGGKDEVILHHDLRAPGC 240
>MGI|MGI:106247 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000245 "spliceosomal complex
assembly" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0000974 "Prp19 complex"
evidence=ISO] [GO:0001833 "inner cell mass cell proliferation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;ISA;IDA] [GO:0005681 "spliceosomal complex"
evidence=ISA;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IDA] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IMP] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
MGI:MGI:106247 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775 GO:GO:0005811
GO:GO:0003677 GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045665 GO:GO:0008610 GO:GO:0005681
InterPro:IPR000772 GO:GO:0045666 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000398 GO:GO:0000151
GO:GO:0048711 GO:GO:0001833 GO:GO:0000974 GO:GO:0048026
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG
EMBL:AF251503 EMBL:AF386760 EMBL:AK047693 EMBL:AK076998
EMBL:AK088769 EMBL:AK164681 EMBL:BC004070 IPI:IPI00222760
IPI:IPI00480440 IPI:IPI00480507 RefSeq:NP_001240772.1
RefSeq:NP_001240773.1 RefSeq:NP_598890.1 UniGene:Mm.225898
ProteinModelPortal:Q99KP6 SMR:Q99KP6 IntAct:Q99KP6 STRING:Q99KP6
PhosphoSite:Q99KP6 REPRODUCTION-2DPAGE:Q99KP6 PaxDb:Q99KP6
PRIDE:Q99KP6 Ensembl:ENSMUST00000025642 Ensembl:ENSMUST00000178868
GeneID:28000 KEGG:mmu:28000 UCSC:uc008grf.1 InParanoid:Q99KP6
NextBio:306504 Bgee:Q99KP6 Genevestigator:Q99KP6
GermOnline:ENSMUSG00000024735 Uniprot:Q99KP6
Length = 504
Score = 100 (40.3 bits), Expect = 0.00021, P = 0.00021
Identities = 23/88 (26%), Positives = 44/88 (50%)
Query: 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNW 59
+H ++ + ++ + ++ +++GGA D + V D +T Q L GH+ V S+ ++
Sbjct: 216 LHSASIPGILALDLCPSDTNKILTGGA-DKNVVVFDKSTEQILATLKGHTKKVTSVVFHP 274
Query: 60 GGATVLSGSHDRTVRFWDLRTRGCTNVL 87
V S S D T+R W + C V+
Sbjct: 275 SQELVFSASPDATIRIWSVPNTSCVQVV 302
>RGD|708496 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19 homolog
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA;ISO] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO;ISS] [GO:0000974 "Prp19 complex"
evidence=IEA;ISO;ISS] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005811 "lipid particle"
evidence=IEA;ISO] [GO:0005819 "spindle" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA;ISO] [GO:0016607 "nuclear speck" evidence=IEA;ISO]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO]
[GO:0042802 "identical protein binding" evidence=IEA;ISO]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA;ISO] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA;ISO] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA;ISO]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 100 (40.3 bits), Expect = 0.00021, P = 0.00021
Identities = 23/88 (26%), Positives = 44/88 (50%)
Query: 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNW 59
+H ++ + ++ + ++ +++GGA D + V D +T Q L GH+ V S+ ++
Sbjct: 216 LHSASIPGILALDLCPSDTNKILTGGA-DKNVVVFDKSTEQILATLKGHTKKVTSVVFHP 274
Query: 60 GGATVLSGSHDRTVRFWDLRTRGCTNVL 87
V S S D T+R W + C V+
Sbjct: 275 SQELVFSASPDATIRIWSVPNTSCVQVV 302
>UNIPROTKB|Q9JMJ4 [details] [associations]
symbol:Prpf19 "Pre-mRNA-processing factor 19" species:10116
"Rattus norvegicus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 100 (40.3 bits), Expect = 0.00021, P = 0.00021
Identities = 23/88 (26%), Positives = 44/88 (50%)
Query: 1 MHDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNW 59
+H ++ + ++ + ++ +++GGA D + V D +T Q L GH+ V S+ ++
Sbjct: 216 LHSASIPGILALDLCPSDTNKILTGGA-DKNVVVFDKSTEQILATLKGHTKKVTSVVFHP 274
Query: 60 GGATVLSGSHDRTVRFWDLRTRGCTNVL 87
V S S D T+R W + C V+
Sbjct: 275 SQELVFSASPDATIRIWSVPNTSCVQVV 302
>DICTYBASE|DDB_G0283635 [details] [associations]
symbol:wdr89 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0283635 EMBL:AAFI02000056 GenomeReviews:CM000153_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 RefSeq:XP_638928.1
ProteinModelPortal:Q54QU5 STRING:Q54QU5 EnsemblProtists:DDB0267166
GeneID:8624167 KEGG:ddi:DDB_G0283635 OMA:INAEDSI Uniprot:Q54QU5
Length = 359
Score = 98 (39.6 bits), Expect = 0.00021, P = 0.00021
Identities = 26/82 (31%), Positives = 40/82 (48%)
Query: 8 DVCFIEDTSNKSSLLISGGAGDC-KIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVL 65
D C++ D S +LL + G+ KIY D + LSGH + + T+L
Sbjct: 26 DTCYVLDLSVTPNLLAAAGSNYLIKIY--DRSNNTILNVLSGHKDAINETKFIENTNTLL 83
Query: 66 SGSHDRTVRFWDLRTRGCTNVL 87
S S D+TV+ WD +T C+ +
Sbjct: 84 SCSSDKTVKIWDTKTGQCSQTI 105
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 101 (40.6 bits), Expect = 0.00021, P = 0.00021
Identities = 26/84 (30%), Positives = 43/84 (51%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G V + F S L S G D ++ + D A+G ++ L GH+ ++ SL ++
Sbjct: 485 HRGPVLSLAF----SPNGKYLASAGE-DQRLKLWDLASGTLYKELRGHTDNITSLTFSPD 539
Query: 61 GATVLSGSHDRTVRFWDLRTRGCT 84
+ + S S D +VR WD+R C+
Sbjct: 540 SSLIASASMDNSVRVWDIRNTYCS 563
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 99 (39.9 bits), Expect = 0.00021, P = 0.00021
Identities = 24/60 (40%), Positives = 33/60 (55%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVL-SGSHDRTVRFWDLRT 80
L++ G+ D I + D ATG L GHS VLS+ + +L SGS D T++ WD T
Sbjct: 253 LLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPAT 312
Score = 97 (39.2 bits), Expect = 0.00035, P = 0.00035
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRFWDLRT 80
L++ G+ D I + D +G L GHS + SL ++ G + SGS D T++ WD T
Sbjct: 211 LLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTAT 270
Score = 96 (38.9 bits), Expect = 0.00045, P = 0.00045
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 15 TSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTV 73
T + L++ G+ D I + D A+G Q L GHS V S+ ++ G + SGS D T+
Sbjct: 48 TFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQLLASGSSDTTI 107
Query: 74 RFWD 77
+ W+
Sbjct: 108 KLWN 111
Score = 93 (37.8 bits), Expect = 0.00095, P = 0.00095
Identities = 29/77 (37%), Positives = 37/77 (48%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H V V F D LL SG A + I + D AT L GHS VL L ++
Sbjct: 154 HSDWVLSVAFSPD----GQLLASGSA-EKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPD 208
Query: 61 GATVLSGSHDRTVRFWD 77
G + SGS+D T++ WD
Sbjct: 209 GRLLASGSNDATIKLWD 225
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 100 (40.3 bits), Expect = 0.00022, P = 0.00022
Identities = 30/83 (36%), Positives = 38/83 (45%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H V D+ F D SL +GG D V D TG+ L GH + L ++
Sbjct: 363 HSKGVYDIAFHTD----GSLAGTGGL-DAFGRVWDLRTGRCIMFLEGHLKEIYGLNFSPN 417
Query: 61 GATVLSGSHDRTVRFWDLRTRGC 83
G V +GS D T + WDLR R C
Sbjct: 418 GYHVATGSGDNTCKVWDLRQRKC 440
>DICTYBASE|DDB_G0284471 [details] [associations]
symbol:kif8 "kinesin-4" species:44689 "Dictyostelium
discoideum" [GO:0007018 "microtubule-based movement" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003777 "microtubule
motor activity" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001752 InterPro:IPR015943
InterPro:IPR019821 Pfam:PF00225 Pfam:PF00400 PRINTS:PR00380
PROSITE:PS00411 PROSITE:PS50067 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00129 SMART:SM00320 dictyBase:DDB_G0284471 GO:GO:0005524
GO:GO:0005737 GO:GO:0005875 GO:GO:0051301 GO:GO:0007067
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 GO:GO:0003777
GO:GO:0007018 Gene3D:3.40.850.10 EMBL:AAFI02000066 HSSP:P33173
EMBL:AY484462 EMBL:U69985 RefSeq:XP_638546.1
ProteinModelPortal:Q6S003 EnsemblProtists:DDB0191403 GeneID:8624639
KEGG:ddi:DDB_G0284471 InParanoid:Q6S003 Uniprot:Q6S003
Length = 1873
Score = 106 (42.4 bits), Expect = 0.00022, P = 0.00022
Identities = 33/86 (38%), Positives = 45/86 (52%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
HDG + + + D N S+L SGG+ D I + D TG LS G V SL N
Sbjct: 1507 HDGGL--LTLVLDEQNPSTLY-SGGS-DKNIKLWDLHTGDNMLDLSS-PGPVRSLCINGS 1561
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNV 86
+ SG +RTV+ WD+R+ G TN+
Sbjct: 1562 SGCMFSGGAERTVKVWDIRSPGNTNL 1587
>UNIPROTKB|Q40687 [details] [associations]
symbol:LOC_Os03g46650 "Guanine nucleotide-binding protein
subunit beta" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEP;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005783 GO:GO:0005886 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0048527 GO:GO:0009817 GO:GO:0009845
GO:GO:0009887 GO:GO:0004871 GO:GO:0010154 GO:GO:0030968
GO:GO:0009867 PRINTS:PR00319 GO:GO:0080008 HOGENOM:HOG000176356
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X89737
EMBL:AC133930 PIR:T03765 ProteinModelPortal:Q40687 IntAct:Q40687
STRING:Q40687 EnsemblPlants:LOC_Os03g46650.1 Gramene:Q40687
Uniprot:Q40687
Length = 380
Score = 98 (39.6 bits), Expect = 0.00023, P = 0.00023
Identities = 30/85 (35%), Positives = 41/85 (48%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQAL-----SGHSGHVLSL 56
H G V ++ D + L+ S G C ++ D TGQ SGH+ VLSL
Sbjct: 156 HKGYVSSCQYVPDQETR--LITSSGDQTCVLW--DVTTGQRISIFGGEFPSGHTADVLSL 211
Query: 57 -YNWGGATV-LSGSHDRTVRFWDLR 79
N + + +SGS D TVR WD+R
Sbjct: 212 SINSSNSNMFVSGSCDATVRLWDIR 236
>CGD|CAL0000650 [details] [associations]
symbol:orf19.2307 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:2000045 "regulation of G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0006379
"mRNA cleavage" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000650 GO:GO:0005634 GO:GO:0007059
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 EMBL:AACQ01000114
EMBL:AACQ01000113 RefSeq:XP_713912.1 RefSeq:XP_713970.1
ProteinModelPortal:Q59WJ4 STRING:Q59WJ4 GeneID:3644356
GeneID:3644415 KEGG:cal:CaO19.2307 KEGG:cal:CaO19.9843 KO:K15542
Uniprot:Q59WJ4
Length = 543
Score = 100 (40.3 bits), Expect = 0.00023, P = 0.00023
Identities = 29/88 (32%), Positives = 41/88 (46%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGG 61
H VRD+ F + N S L G D I + + G+ + LSGH V S +W
Sbjct: 217 HANGVRDIAF---SPNDSKFLTCGD--DSAIKIWNFNNGKEERTLSGHHWEVKSA-DWHP 270
Query: 62 --ATVLSGSHDRTVRFWDLRTRGCTNVL 87
++SGS D V+ WD R+ C + L
Sbjct: 271 NLGLIVSGSKDNLVKLWDPRSANCVSTL 298
>UNIPROTKB|Q59WJ4 [details] [associations]
symbol:PFS2 "Polyadenylation factor subunit 2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000650 GO:GO:0005634
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397
EMBL:AACQ01000114 EMBL:AACQ01000113 RefSeq:XP_713912.1
RefSeq:XP_713970.1 ProteinModelPortal:Q59WJ4 STRING:Q59WJ4
GeneID:3644356 GeneID:3644415 KEGG:cal:CaO19.2307
KEGG:cal:CaO19.9843 KO:K15542 Uniprot:Q59WJ4
Length = 543
Score = 100 (40.3 bits), Expect = 0.00023, P = 0.00023
Identities = 29/88 (32%), Positives = 41/88 (46%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGG 61
H VRD+ F + N S L G D I + + G+ + LSGH V S +W
Sbjct: 217 HANGVRDIAF---SPNDSKFLTCGD--DSAIKIWNFNNGKEERTLSGHHWEVKSA-DWHP 270
Query: 62 --ATVLSGSHDRTVRFWDLRTRGCTNVL 87
++SGS D V+ WD R+ C + L
Sbjct: 271 NLGLIVSGSKDNLVKLWDPRSANCVSTL 298
>FB|FBgn0028496 [details] [associations]
symbol:CG30116 species:7227 "Drosophila melanogaster"
[GO:0016505 "apoptotic protease activator activity" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
UCSC:CG30116-RC FlyBase:FBgn0028496 EMBL:BT015296
ProteinModelPortal:Q6AWF2 PRIDE:Q6AWF2 InParanoid:Q6AWF2
ArrayExpress:Q6AWF2 Bgee:Q6AWF2 Uniprot:Q6AWF2
Length = 1923
Score = 106 (42.4 bits), Expect = 0.00023, P = 0.00023
Identities = 26/85 (30%), Positives = 44/85 (51%)
Query: 10 CFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGS 68
C +NK+ +L G+ D + + D TG+ L+GH G V+ + + G+T +SGS
Sbjct: 1423 CVAVSVTNKTQVL--SGSKDMNLILWDLLTGEEVHTLAGHLGPVIGVKVSADGSTAVSGS 1480
Query: 69 HDRTVRFWDLRTRGCTNVLTPITVP 93
D+T+ W+ + RG + VP
Sbjct: 1481 DDKTLIVWETK-RGLALTSLQMHVP 1504
>SGD|S000002971 [details] [associations]
symbol:CDH1 "Activator of anaphase-promoting
complex/cyclosome (APC/C)" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:2000600 "positive
regulation of cyclin catabolic process" evidence=IDA] [GO:0030332
"cyclin binding" evidence=IDA] [GO:0007092 "activation of mitotic
anaphase-promoting complex activity" evidence=IMP] [GO:0008361
"regulation of cell size" evidence=IMP] [GO:0005680
"anaphase-promoting complex" evidence=IPI] [GO:0045842 "positive
regulation of mitotic metaphase/anaphase transition" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0010697 "negative
regulation of spindle pole body separation" evidence=IGI;IMP]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0010997
"anaphase-promoting complex binding" evidence=IDA] [GO:0097027
"ubiquitin-protein ligase activator activity" evidence=IDA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002971 GO:GO:0005737 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:BK006941
eggNOG:COG2319 GO:GO:0008361 GO:GO:0005680 GO:GO:0007092
GO:GO:2000060 HOGENOM:HOG000195514 GO:GO:0010997 GO:GO:0097027
KO:K03364 EMBL:Z72525 EMBL:AY693078 PIR:S64005 RefSeq:NP_011512.1
ProteinModelPortal:P53197 SMR:P53197 DIP:DIP-5915N IntAct:P53197
MINT:MINT-673168 STRING:P53197 EnsemblFungi:YGL003C GeneID:852881
KEGG:sce:YGL003C CYGD:YGL003c GeneTree:ENSGT00580000081606
OMA:TSHGYSK OrthoDB:EOG43FM5B NextBio:972526 Genevestigator:P53197
GermOnline:YGL003C GO:GO:0030332 GO:GO:0010697 GO:GO:2000600
Uniprot:P53197
Length = 566
Score = 100 (40.3 bits), Expect = 0.00024, P = 0.00024
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 9 VCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSG 67
+C + + N + L+ S G + + DC + L GHS VL L + G TV+SG
Sbjct: 474 ICNMVWSKNTNELVTSHGYSKYNLTLWDCNSMDPIAILKGHSFRVLHLTLSNDGTTVVSG 533
Query: 68 SHDRTVRFWDL 78
+ D T+R+W L
Sbjct: 534 AGDETLRYWKL 544
>MGI|MGI:104581 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta 4" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISA] [GO:0006184 "GTP catabolic process" evidence=ISA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0044297 "cell body" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 MGI:MGI:104581
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 OMA:GACDATS EMBL:S86124 EMBL:M87286 EMBL:M63658
EMBL:AF277893 EMBL:AF501886 EMBL:AK036816 EMBL:AK152227
EMBL:AK167416 EMBL:BC028753 IPI:IPI00310220 PIR:JS0669
RefSeq:NP_038559.2 UniGene:Mm.139192 ProteinModelPortal:P29387
SMR:P29387 DIP:DIP-604N IntAct:P29387 STRING:P29387
PhosphoSite:P29387 REPRODUCTION-2DPAGE:P29387 PaxDb:P29387
PRIDE:P29387 Ensembl:ENSMUST00000108234 Ensembl:ENSMUST00000155737
GeneID:14696 KEGG:mmu:14696 InParanoid:P29387 NextBio:286647
Bgee:P29387 Genevestigator:P29387 GermOnline:ENSMUSG00000027669
Uniprot:P29387
Length = 340
Score = 97 (39.2 bits), Expect = 0.00024, P = 0.00024
Identities = 27/88 (30%), Positives = 42/88 (47%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G + F++D ++ S G C ++ D TGQ +GHSG V+SL +
Sbjct: 142 HTGYLSCCRFLDD----GQIITSSGDTTCALW--DIETGQQTTTFTGHSGDVMSLSLSPD 195
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLT 88
T +SG+ D + + WD+R C T
Sbjct: 196 LKTFVSGACDASSKLWDIRDGMCRQSFT 223
>RGD|1359321 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta polypeptide 4" species:10116 "Rattus norvegicus" [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0044297 "cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 RGD:1359321 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
GO:GO:0044297 PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 EMBL:AY552804 EMBL:BC097370 EMBL:AF022085 IPI:IPI00422067
RefSeq:NP_001013932.1 UniGene:Rn.10844 ProteinModelPortal:O35353
SMR:O35353 IntAct:O35353 STRING:O35353 PhosphoSite:O35353
PRIDE:O35353 GeneID:294962 KEGG:rno:294962 UCSC:RGD:1359321
InParanoid:O35353 NextBio:638784 ArrayExpress:O35353
Genevestigator:O35353 Uniprot:O35353
Length = 340
Score = 97 (39.2 bits), Expect = 0.00024, P = 0.00024
Identities = 27/88 (30%), Positives = 42/88 (47%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G + F++D ++ S G C ++ D TGQ +GHSG V+SL +
Sbjct: 142 HTGYLSCCRFLDD----GQIITSSGDTTCALW--DIETGQQTTTFTGHSGDVMSLSLSPD 195
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLT 88
T +SG+ D + + WD+R C T
Sbjct: 196 LKTFVSGACDASSKLWDIRDGMCRQSFT 223
>POMBASE|SPBC713.05 [details] [associations]
symbol:SPBC713.05 "WD repeat protein, human MAPK
organizer 1 (MORG1) family (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISS]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC713.05 GO:GO:0005829 GO:GO:0005634 GO:GO:0043234
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0071276 GO:GO:0071585
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045292
HOGENOM:HOG000091642 KO:K13124 OMA:CKQGAVR RefSeq:NP_595344.1
ProteinModelPortal:Q9C1X0 EnsemblFungi:SPBC713.05.1 GeneID:2541181
KEGG:spo:SPBC713.05 OrthoDB:EOG4K9FNP NextBio:20802293
Uniprot:Q9C1X0
Length = 297
Score = 96 (38.9 bits), Expect = 0.00025, P = 0.00025
Identities = 29/92 (31%), Positives = 44/92 (47%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H + D+ + D++ +S GD I V D TG+ + L GH + ++ YN
Sbjct: 55 HGHEILDLDLVYDSTKFASC-----GGDKFIQVWDVNTGKVDRRLGGHLAQINTIRYNED 109
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVLTPITV 92
+ + SGS D VR WD R+ N +PI V
Sbjct: 110 SSILASGSFDSKVRLWDCRS----NSFSPIQV 137
>DICTYBASE|DDB_G0282793 [details] [associations]
symbol:wdr61 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AAFI02000047
GenomeReviews:CM000152_GR eggNOG:COG2319 HSSP:P16649
RefSeq:XP_640180.1 ProteinModelPortal:Q54S59
EnsemblProtists:DDB0267163 GeneID:8623719 KEGG:ddi:DDB_G0282793
OMA:CIWDIKT ProtClustDB:CLSZ2430473 Uniprot:Q54S59
Length = 299
Score = 96 (38.9 bits), Expect = 0.00025, P = 0.00025
Identities = 29/83 (34%), Positives = 40/83 (48%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQA-LSGHSGHVLSLYNWG 60
H +R +CF D+ I GA D +I + D + + A L GHS + SL
Sbjct: 181 HGVPIRSLCFSSDSKT-----IFTGAEDSQIRLHDPNSSNPYIASLLGHSSFIFSLVASS 235
Query: 61 GATVL--SGSHDRTVRFWDLRTR 81
+L SGS DR V WD++TR
Sbjct: 236 NGDLLASSGSIDRKVCIWDIKTR 258
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 100 (40.3 bits), Expect = 0.00025, P = 0.00025
Identities = 26/84 (30%), Positives = 42/84 (50%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G V + F S L S G D ++ + D A+G ++ L GH+ ++ SL ++
Sbjct: 467 HRGPVLSLAF----SPNGKYLASAGE-DQRLKLWDLASGTLYKELRGHTDNITSLTFSPD 521
Query: 61 GATVLSGSHDRTVRFWDLRTRGCT 84
+ S S D +VR WD+R C+
Sbjct: 522 SGLIASASMDNSVRVWDIRNTYCS 545
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 100 (40.3 bits), Expect = 0.00025, P = 0.00025
Identities = 27/83 (32%), Positives = 41/83 (49%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G V + F S L S G D ++ + D A+G F+ L GH+ + SL ++
Sbjct: 467 HRGPVLSLSF----SPNGKYLASAGE-DQRLKLWDLASGTLFKELRGHTDSITSLAFSPD 521
Query: 61 GATVLSGSHDRTVRFWDLRTRGC 83
+ S S D +VR WD+R+ C
Sbjct: 522 SGLIASASMDNSVRVWDIRSTCC 544
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 99 (39.9 bits), Expect = 0.00026, P = 0.00026
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
I G D I + D ++ + + L+GH+G VL L + +++GS D TVR WD+ T
Sbjct: 204 IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCL-QYDERVIVTGSSDSTVRVWDVNTGE 262
Query: 83 CTNVL 87
N L
Sbjct: 263 VLNTL 267
Score = 94 (38.1 bits), Expect = 0.00088, P = 0.00088
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
I +GD I V +T + + L+GH + L + V+SGS D T+R WD+
Sbjct: 327 IVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACL-QYRDRLVVSGSSDNTIRLWDIECGA 385
Query: 83 CTNVL 87
C VL
Sbjct: 386 CLRVL 390
>POMBASE|SPBC428.19c [details] [associations]
symbol:utp15 "U3 snoRNP protein Utp15 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0030490 "maturation of SSU-rRNA" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] [GO:0034455 "t-UTP
complex" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 PomBase:SPBC428.19c
GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GenomeReviews:CU329671_GR HSSP:P16649 GO:GO:0032040 GO:GO:0030490
GO:GO:0034455 HOGENOM:HOG000185028 KO:K14549 OMA:QFEGHTK PIR:T40471
RefSeq:NP_595197.1 ProteinModelPortal:O94365 STRING:O94365
EnsemblFungi:SPBC428.19c.1 GeneID:2540858 KEGG:spo:SPBC428.19c
OrthoDB:EOG4TB7KP NextBio:20801974 Uniprot:O94365
Length = 494
Score = 99 (39.9 bits), Expect = 0.00026, P = 0.00026
Identities = 24/76 (31%), Positives = 36/76 (47%)
Query: 7 RDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSG--HVLSLYNWGGATV 64
+D + + LL++G A + + D +T +AL H HV + T
Sbjct: 81 KDTAYSGNIRKDGKLLLAGDATGL-VQIFDLSTRSILRALDAHQFPVHVTQFCPYANTTF 139
Query: 65 LSGSHDRTVRFWDLRT 80
LSGS D+TV+ WDL T
Sbjct: 140 LSGSDDKTVKVWDLST 155
Score = 98 (39.6 bits), Expect = 0.00033, P = 0.00033
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 26 GAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGAT-VLSGSHDRTVRFWDLR 79
G+ D + V D +TG LSGH +V + +W AT ++SG +D T+R WD R
Sbjct: 142 GSDDKTVKVWDLSTGAVQYDLSGHEDYVRTA-SWMSATRLVSGGYDGTIRLWDTR 195
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 101 (40.6 bits), Expect = 0.00026, P = 0.00026
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTR 81
LISGG D I V + TGQ GH V+S+ ++ +++SGS D TVR W + +R
Sbjct: 436 LISGGL-DSTIKVWNYHTGQCIATYRGHEDAVVSV-DFTNKSIVSGSADHTVRVWHVDSR 493
Query: 82 GC 83
C
Sbjct: 494 TC 495
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 99 (39.9 bits), Expect = 0.00027, P = 0.00027
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
I G D I + D +T + + L+GH+G VL L + +++GS D TVR WD+ T
Sbjct: 217 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCL-QYDERVIITGSSDSTVRVWDVNTGE 275
Query: 83 CTNVL 87
N L
Sbjct: 276 MLNTL 280
Score = 95 (38.5 bits), Expect = 0.00071, P = 0.00071
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
I +GD I V + +T + + L+GH + L + V+SGS D T+R WD+
Sbjct: 340 IVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACL-QYRDRLVVSGSSDNTIRLWDIECGA 398
Query: 83 CTNVL 87
C VL
Sbjct: 399 CLRVL 403
>UNIPROTKB|E1BL00 [details] [associations]
symbol:PWP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 KO:K14558 OMA:VWQCDTP
InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 CTD:5822 EMBL:DAAA02003485 IPI:IPI00686265
RefSeq:XP_002685190.1 RefSeq:XP_592170.3 ProteinModelPortal:E1BL00
Ensembl:ENSBTAT00000009343 GeneID:514336 KEGG:bta:514336
NextBio:20871282 Uniprot:E1BL00
Length = 919
Score = 102 (41.0 bits), Expect = 0.00027, P = 0.00027
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 10 CFIEDTSNKSSLLISGGAGDC-KIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSG 67
C D+S + ++S GA D ++++ TG+ LSGH G + L +N + + S
Sbjct: 461 CVAVDSSGE---IVSAGAQDSFEVFIWSMQTGRLLDVLSGHEGPISGLCFNPMKSVLASA 517
Query: 68 SHDRTVRFWDL 78
S DRTV WD+
Sbjct: 518 SWDRTVHLWDM 528
>UNIPROTKB|Q3SZD4 [details] [associations]
symbol:WDR18 "WD repeat-containing protein 18" species:9913
"Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00390000000289 EMBL:BC102946 IPI:IPI00685371
RefSeq:NP_001029760.1 UniGene:Bt.87593 ProteinModelPortal:Q3SZD4
STRING:Q3SZD4 PRIDE:Q3SZD4 Ensembl:ENSBTAT00000003156 GeneID:533356
KEGG:bta:533356 CTD:57418 HOGENOM:HOG000046506 HOVERGEN:HBG059735
InParanoid:Q3SZD4 OMA:KQCIRTV OrthoDB:EOG4PZJ6K NextBio:20876013
InterPro:IPR026987 Pfam:PF14077 Uniprot:Q3SZD4
Length = 432
Score = 98 (39.6 bits), Expect = 0.00027, P = 0.00027
Identities = 32/100 (32%), Positives = 47/100 (47%)
Query: 8 DVCFIEDTSNKSSLLISGGAGDCKIYVTDCAT--GQ---AFQ-------ALSGHSGHVLS 55
DV + T + + + G D I+ D T GQ +FQ GH V
Sbjct: 215 DVGILAVTMDLAEHYMFCGGSDGSIFQVDLCTWPGQREKSFQPEQEHGKVFRGHRNQVTC 274
Query: 56 L-YNWGGATVLSGSHDRTVRFWDLRTRGCTNVLT---PIT 91
L + G+ +LSGSHD TVR WD++++ C +T P+T
Sbjct: 275 LSVSTDGSVLLSGSHDETVRLWDVQSQQCLRTVTLKGPVT 314
>CGD|CAL0005343 [details] [associations]
symbol:DOA1 species:5476 "Candida albicans" [GO:0004620
"phospholipase activity" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:1900429 "negative regulation of filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005343 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004620 GO:GO:0006511
EMBL:AACQ01000001 EMBL:AACQ01000002 GO:GO:0044182 GO:GO:1900429
HOGENOM:HOG000174247 KO:K14018 InterPro:IPR015155
InterPro:IPR013535 Pfam:PF09070 Pfam:PF08324 PROSITE:PS51394
PROSITE:PS51396 RefSeq:XP_723325.1 RefSeq:XP_723515.1
ProteinModelPortal:Q5APD6 STRING:Q5APD6 GeneID:3634871
GeneID:3635107 KEGG:cal:CaO19.12292 KEGG:cal:CaO19.4829
Uniprot:Q5APD6
Length = 761
Score = 101 (40.6 bits), Expect = 0.00027, P = 0.00027
Identities = 31/92 (33%), Positives = 39/92 (42%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGG 61
H +R + +E L G K++ D TG+ Q GH V L
Sbjct: 175 HSDVIRKLLILE---GGEQFLSCSNDGTIKLW--DLQTGKNLQTFYGHESFVYDLALIAN 229
Query: 62 ATVLSGSHDRTVRFWDLRTRGCTNVLTPITVP 93
+S DRTVR WDL T G NVL IT+P
Sbjct: 230 GKFVSTGEDRTVRIWDLAT-G--NVLQVITLP 258
>UNIPROTKB|Q5APD6 [details] [associations]
symbol:DOA1 "Putative uncharacterized protein DOA1"
species:237561 "Candida albicans SC5314" [GO:0004620 "phospholipase
activity" evidence=IMP] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005343 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004620 GO:GO:0006511
EMBL:AACQ01000001 EMBL:AACQ01000002 GO:GO:0044182 GO:GO:1900429
HOGENOM:HOG000174247 KO:K14018 InterPro:IPR015155
InterPro:IPR013535 Pfam:PF09070 Pfam:PF08324 PROSITE:PS51394
PROSITE:PS51396 RefSeq:XP_723325.1 RefSeq:XP_723515.1
ProteinModelPortal:Q5APD6 STRING:Q5APD6 GeneID:3634871
GeneID:3635107 KEGG:cal:CaO19.12292 KEGG:cal:CaO19.4829
Uniprot:Q5APD6
Length = 761
Score = 101 (40.6 bits), Expect = 0.00027, P = 0.00027
Identities = 31/92 (33%), Positives = 39/92 (42%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGG 61
H +R + +E L G K++ D TG+ Q GH V L
Sbjct: 175 HSDVIRKLLILE---GGEQFLSCSNDGTIKLW--DLQTGKNLQTFYGHESFVYDLALIAN 229
Query: 62 ATVLSGSHDRTVRFWDLRTRGCTNVLTPITVP 93
+S DRTVR WDL T G NVL IT+P
Sbjct: 230 GKFVSTGEDRTVRIWDLAT-G--NVLQVITLP 258
>SGD|S000004401 [details] [associations]
symbol:UTP21 "Subunit of U3-containing 90S preribosome and
SSU processome" species:4932 "Saccharomyces cerevisiae" [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA;IGI] [GO:0042274 "ribosomal small subunit biogenesis"
evidence=IC] [GO:0034388 "Pwp2p-containing subcomplex of 90S
preribosome" evidence=IDA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0032040 "small-subunit processome"
evidence=IEA;IDA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SGD:S000004401
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 EMBL:BK006945 InterPro:IPR011047 SUPFAM:SSF50998
EMBL:U19729 GO:GO:0006364 GO:GO:0032040 GO:GO:0042274 GO:GO:0034388
PIR:S55965 RefSeq:NP_013513.3 RefSeq:NP_058174.3
ProteinModelPortal:Q06078 SMR:Q06078 DIP:DIP-6416N IntAct:Q06078
MINT:MINT-561636 STRING:Q06078 PaxDb:Q06078 PeptideAtlas:Q06078
EnsemblFungi:YLR409C GeneID:851125 GeneID:851128 KEGG:sce:YLR409C
KEGG:sce:YLR410W-B CYGD:YLR409c GeneTree:ENSGT00390000004976
HOGENOM:HOG000217777 KO:K14554 OMA:DGIIACH OrthoDB:EOG46T68Q
NextBio:967857 Genevestigator:Q06078 GermOnline:YLR409C
Uniprot:Q06078
Length = 939
Score = 102 (41.0 bits), Expect = 0.00027, P = 0.00027
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 17 NKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVRF 75
++SS L + D I V D T + + L GHS + + ++ G ++S S D T+R
Sbjct: 552 HRSSDLFALALDDLSIVVIDAVTQRVVRQLWGHSNRITAFDFSPEGRWIVSASLDSTIRT 611
Query: 76 WDLRTRGC 83
WDL T GC
Sbjct: 612 WDLPTGGC 619
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 99 (39.9 bits), Expect = 0.00028, P = 0.00028
Identities = 28/83 (33%), Positives = 39/83 (46%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H V D+ F +D SL +GG D V D TG+ L GH + + ++
Sbjct: 363 HSMGVYDIAFHQD----GSLAGTGGL-DAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPN 417
Query: 61 GATVLSGSHDRTVRFWDLRTRGC 83
G + +GS D T + WDLR R C
Sbjct: 418 GYHIATGSGDNTCKVWDLRQRRC 440
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 99 (39.9 bits), Expect = 0.00028, P = 0.00028
Identities = 28/83 (33%), Positives = 39/83 (46%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H V D+ F +D SL +GG D V D TG+ L GH + + ++
Sbjct: 363 HSMGVYDIAFHQD----GSLAGTGGL-DAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPN 417
Query: 61 GATVLSGSHDRTVRFWDLRTRGC 83
G + +GS D T + WDLR R C
Sbjct: 418 GYHIATGSGDNTCKVWDLRQRRC 440
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 99 (39.9 bits), Expect = 0.00028, P = 0.00028
Identities = 28/83 (33%), Positives = 39/83 (46%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H V D+ F +D SL +GG D V D TG+ L GH + + ++
Sbjct: 363 HSMGVYDIAFHQD----GSLAGTGGL-DAFGRVWDLRTGRCIMFLEGHLKEIYGISFSPN 417
Query: 61 GATVLSGSHDRTVRFWDLRTRGC 83
G + +GS D T + WDLR R C
Sbjct: 418 GYHIATGSGDNTCKVWDLRQRRC 440
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 99 (39.9 bits), Expect = 0.00028, P = 0.00028
Identities = 28/83 (33%), Positives = 39/83 (46%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H V D+ F +D SL +GG D V D TG+ L GH + + ++
Sbjct: 364 HSMGVYDIAFHQD----GSLAGTGGL-DAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPN 418
Query: 61 GATVLSGSHDRTVRFWDLRTRGC 83
G + +GS D T + WDLR R C
Sbjct: 419 GYHIATGSGDNTCKVWDLRQRRC 441
>CGD|CAL0000994 [details] [associations]
symbol:orf19.1791 species:5476 "Candida albicans" [GO:0016020
"membrane" evidence=IEA] [GO:0030685 "nucleolar preribosome"
evidence=IEA] [GO:0004860 "protein kinase inhibitor activity"
evidence=IEA] [GO:0070507 "regulation of microtubule cytoskeleton
organization" evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000027 "ribosomal large subunit assembly"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0071775 "regulation of cell cycle cytokinesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000198 EMBL:AACQ01000197 KO:K14830 eggNOG:NOG328772
RefSeq:XP_711439.1 RefSeq:XP_711456.1 ProteinModelPortal:Q59P13
STRING:Q59P13 GeneID:3646935 GeneID:3646959 KEGG:cal:CaO19.1791
KEGG:cal:CaO19.9357 Uniprot:Q59P13
Length = 491
Score = 88 (36.0 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 21/66 (31%), Positives = 33/66 (50%)
Query: 16 SNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSGSHDRTVR 74
S K+ + G+ D KI + + F L GH+G + L + G +S S D+T+R
Sbjct: 155 SQKTGKWLLSGSEDGKIIIWRTKDWETFGILKGHTGKINDLAIHPSGRVAISVSQDQTIR 214
Query: 75 FWDLRT 80
W+L T
Sbjct: 215 LWNLMT 220
Score = 31 (16.0 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 5/18 (27%), Positives = 11/18 (61%)
Query: 2 HDGTVRDVCFIEDTSNKS 19
H+GT+ + F + S ++
Sbjct: 116 HNGTITSLKFSTEVSTEN 133
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 99 (39.9 bits), Expect = 0.00028, P = 0.00028
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
I G D I + D ++ + + L+GH+G VL L + +++GS D TVR WD+ T
Sbjct: 238 IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCL-QYDERVIVTGSSDSTVRVWDVNTGE 296
Query: 83 CTNVL 87
N L
Sbjct: 297 VLNTL 301
Score = 94 (38.1 bits), Expect = 0.00097, P = 0.00097
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
I +GD I V +T + + L+GH + L + V+SGS D T+R WD+
Sbjct: 361 IVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACL-QYRDRLVVSGSSDNTIRLWDIECGA 419
Query: 83 CTNVL 87
C VL
Sbjct: 420 CLRVL 424
>SGD|S000001308 [details] [associations]
symbol:MET30 "F-box protein containing five copies of the
WD40 motif" species:4932 "Saccharomyces cerevisiae" [GO:0008652
"cellular amino acid biosynthetic process" evidence=IEA]
[GO:0019344 "cysteine biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IGI;IPI] [GO:0000209 "protein polyubiquitination"
evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IDA] [GO:0000114 "regulation of transcription involved in
G1 phase of mitotic cell cycle" evidence=IMP] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IMP] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IMP] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 SGD:S000001308 GO:GO:0005737
GO:GO:0046686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046685 GO:GO:0000082 EMBL:BK006942
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
SUPFAM:SSF81383 EMBL:Z46861 GO:GO:0000114 GO:GO:0009086
GO:GO:0000209 GO:GO:0019344 GO:GO:0043130 GO:GO:0031146
GO:GO:0000087 GO:GO:0043224 GO:GO:0030174
GeneTree:ENSGT00690000101849 EMBL:L26505 PIR:S49932
RefSeq:NP_012218.1 ProteinModelPortal:P39014 SMR:P39014
DIP:DIP-1439N IntAct:P39014 MINT:MINT-385167 STRING:P39014
PaxDb:P39014 PeptideAtlas:P39014 EnsemblFungi:YIL046W GeneID:854765
KEGG:sce:YIL046W CYGD:YIL046w HOGENOM:HOG000166480 KO:K10259
OMA:ILCYLDT OrthoDB:EOG496313 NextBio:977517 Genevestigator:P39014
GermOnline:YIL046W Uniprot:P39014
Length = 640
Score = 100 (40.3 bits), Expect = 0.00028, P = 0.00028
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTR 81
L+ G+ D I + D TG+ + LSGHS V +LY + +++GS D+T+R W+ T
Sbjct: 314 LLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLY-FDDRKLITGSLDKTIRVWNYITG 372
Query: 82 GC 83
C
Sbjct: 373 EC 374
Score = 95 (38.5 bits), Expect = 0.00097, P = 0.00097
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 22 LISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTR 81
LI+G D I V + TG+ GHS VLS+ ++ ++SGS D+TV+ W + +R
Sbjct: 355 LITGSL-DKTIRVWNYITGECISTYRGHSDSVLSVDSYQ-KVIVSGSADKTVKVWHVESR 412
Query: 82 GC 83
C
Sbjct: 413 TC 414
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 99 (39.9 bits), Expect = 0.00029, P = 0.00029
Identities = 28/83 (33%), Positives = 39/83 (46%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H V D+ F +D SL +GG D V D TG+ L GH + + ++
Sbjct: 379 HSMGVYDIAFHQD----GSLAGTGGL-DAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPN 433
Query: 61 GATVLSGSHDRTVRFWDLRTRGC 83
G + +GS D T + WDLR R C
Sbjct: 434 GYHIATGSGDNTCKVWDLRQRRC 456
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 99 (39.9 bits), Expect = 0.00029, P = 0.00029
Identities = 28/83 (33%), Positives = 39/83 (46%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H V D+ F +D SL +GG D V D TG+ L GH + + ++
Sbjct: 381 HSMGVYDIAFHQD----GSLAGTGGL-DAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPN 435
Query: 61 GATVLSGSHDRTVRFWDLRTRGC 83
G + +GS D T + WDLR R C
Sbjct: 436 GYHIATGSGDNTCKVWDLRQRRC 458
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 99 (39.9 bits), Expect = 0.00029, P = 0.00029
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
I G D I + D ++ + + L+GH+G VL L + +++GS D TVR WD+ T
Sbjct: 253 IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCL-QYDERVIVTGSSDSTVRVWDVNTGE 311
Query: 83 CTNVL 87
N L
Sbjct: 312 VLNTL 316
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 99 (39.9 bits), Expect = 0.00031, P = 0.00031
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
I G D I + D +T + + L+GH+G VL L + +++GS D TVR WD+ T
Sbjct: 280 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCL-QYDERVIITGSSDSTVRVWDVNTGE 338
Query: 83 CTNVL 87
N L
Sbjct: 339 MLNTL 343
Score = 95 (38.5 bits), Expect = 0.00083, P = 0.00083
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 23 ISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLYNWGGATVLSGSHDRTVRFWDLRTRG 82
I +GD I V + +T + + L+GH + L + V+SGS D T+R WD+
Sbjct: 403 IVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACL-QYRDRLVVSGSSDNTIRLWDIECGA 461
Query: 83 CTNVL 87
C VL
Sbjct: 462 CLRVL 466
>UNIPROTKB|F1RKG5 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 OMA:HHPQVPD EMBL:CU468330
Ensembl:ENSSSCT00000010800 Uniprot:F1RKG5
Length = 404
Score = 97 (39.2 bits), Expect = 0.00032, P = 0.00032
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVL-SGSHDRTVRFW 76
S L+++ G D +I + + TG LSGH V L + G+ +L S S D+T+R W
Sbjct: 122 SCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIW 181
Query: 77 DLRTRG 82
DL G
Sbjct: 182 DLNKHG 187
>MGI|MGI:2144041 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 MGI:MGI:2144041
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 EMBL:CH466529 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:AF033188 EMBL:AF072881 EMBL:AK157999 EMBL:BC055100
IPI:IPI00556687 RefSeq:NP_067514.2 UniGene:Mm.28489
ProteinModelPortal:O54929 SMR:O54929 STRING:O54929
PhosphoSite:O54929 PRIDE:O54929 Ensembl:ENSMUST00000031309
GeneID:59043 KEGG:mmu:59043 NextBio:314658 Bgee:O54929
CleanEx:MM_WSB2 Genevestigator:O54929 GermOnline:ENSMUSG00000029364
Uniprot:O54929
Length = 404
Score = 97 (39.2 bits), Expect = 0.00032, P = 0.00032
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVL-SGSHDRTVRFW 76
S L+++ G D +I + + TG LSGH V L + G+ +L S S D+T+R W
Sbjct: 122 SCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIW 181
Query: 77 DLRTRG 82
DL G
Sbjct: 182 DLNKHG 187
>RGD|1359599 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 RGD:1359599
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:BC081901 IPI:IPI00371120 RefSeq:NP_001007617.1 UniGene:Rn.4063
Ensembl:ENSRNOT00000001499 GeneID:288692 KEGG:rno:288692
UCSC:RGD:1359599 InParanoid:Q66HE3 NextBio:628569
Genevestigator:Q66HE3 Uniprot:Q66HE3
Length = 404
Score = 97 (39.2 bits), Expect = 0.00032, P = 0.00032
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVL-SGSHDRTVRFW 76
S L+++ G D +I + + TG LSGH V L + G+ +L S S D+T+R W
Sbjct: 122 SCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPNGSLILVSASRDKTLRIW 181
Query: 77 DLRTRG 82
DL G
Sbjct: 182 DLNKHG 187
>UNIPROTKB|Q0V8J1 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 EMBL:BT026227 IPI:IPI00708559
RefSeq:NP_001068825.1 UniGene:Bt.109198 ProteinModelPortal:Q0V8J1
Ensembl:ENSBTAT00000009395 GeneID:508388 KEGG:bta:508388 CTD:55884
InParanoid:Q0V8J1 KO:K10342 OMA:HHPQVPD OrthoDB:EOG45DWPC
NextBio:20868498 Uniprot:Q0V8J1
Length = 406
Score = 97 (39.2 bits), Expect = 0.00032, P = 0.00032
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVL-SGSHDRTVRFW 76
S L+++ G D +I + + TG LSGH V L + G+ +L S S D+T+R W
Sbjct: 124 SCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIW 183
Query: 77 DLRTRG 82
DL G
Sbjct: 184 DLNKHG 189
>UNIPROTKB|F1P6A3 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:55884 KO:K10342 OMA:HHPQVPD
EMBL:AAEX03014719 RefSeq:XP_534697.2 ProteinModelPortal:F1P6A3
Ensembl:ENSCAFT00000015752 GeneID:477500 KEGG:cfa:477500
Uniprot:F1P6A3
Length = 406
Score = 97 (39.2 bits), Expect = 0.00032, P = 0.00032
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 19 SSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVL-SGSHDRTVRFW 76
S L+++ G D +I + + TG LSGH V L + G+ +L S S D+T+R W
Sbjct: 124 SCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIW 183
Query: 77 DLRTRG 82
DL G
Sbjct: 184 DLNKHG 189
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 96 (38.9 bits), Expect = 0.00032, P = 0.00032
Identities = 27/82 (32%), Positives = 39/82 (47%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLY--NW 59
H G V ++ + D SLL S D + V D TG+ + L GH+ V S +
Sbjct: 98 HSGAVMELHYNTD----GSLLFSAST-DKTVCVWDSETGERVKRLKGHTSFVNSCFPARR 152
Query: 60 GGATVLSGSHDRTVRFWDLRTR 81
G +GS D TV+ WD+R +
Sbjct: 153 GPQLACTGSDDGTVKLWDIRKK 174
>TAIR|locus:2139335 [details] [associations]
symbol:AT4G03020 "AT4G03020" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GO:GO:0080008 KO:K11801 InterPro:IPR017399 PIRSF:PIRSF038135
OMA:RMLHQRE EMBL:AY099735 EMBL:BT000357 IPI:IPI00532225
RefSeq:NP_001190666.1 RefSeq:NP_192211.2 UniGene:At.34236
ProteinModelPortal:Q8LPI5 SMR:Q8LPI5 IntAct:Q8LPI5 STRING:Q8LPI5
PaxDb:Q8LPI5 PRIDE:Q8LPI5 EnsemblPlants:AT4G03020.1
EnsemblPlants:AT4G03020.2 GeneID:828111 KEGG:ath:AT4G03020
TAIR:At4g03020 InParanoid:Q8LPI5 PhylomeDB:Q8LPI5
ProtClustDB:CLSN2690277 Genevestigator:Q8LPI5 Uniprot:Q8LPI5
Length = 493
Score = 98 (39.6 bits), Expect = 0.00033, P = 0.00033
Identities = 26/82 (31%), Positives = 42/82 (51%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGD-CKIYVTDCATGQAFQA--LSGHSGHVLSLYN 58
H V VCF +++ N L++SG + CK++ C G+ A L GH V + +
Sbjct: 270 HTSDVNTVCFADESGN---LILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDS 326
Query: 59 WG-GATVLSGSHDRTVRFWDLR 79
G G +S D+T++ WD+R
Sbjct: 327 RGDGRYFISNGKDQTIKLWDIR 348
>RGD|620759 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein), beta
5" species:10116 "Rattus norvegicus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IC;ISO;TAS] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0043234 "protein complex" evidence=IDA]
[GO:0044297 "cell body" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:620759
GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0004871 GO:GO:0044297 PRINTS:PR00319 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
CTD:10681 EMBL:AF001953 EMBL:AY552803 EMBL:BC089221 EMBL:AF022086
IPI:IPI00212659 RefSeq:NP_113958.1 UniGene:Rn.23042
ProteinModelPortal:P62882 SMR:P62882 PhosphoSite:P62882
PRIDE:P62882 GeneID:83579 KEGG:rno:83579 UCSC:RGD:620759
NextBio:616103 Genevestigator:P62882 Uniprot:P62882
Length = 353
Score = 96 (38.9 bits), Expect = 0.00033, P = 0.00033
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 15 TSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLY---NWGGATVLSGSHDR 71
T++ +L + G G C ++ D +GQ Q+ GH VL L + G T +SG D+
Sbjct: 162 TNSDMQILTASGDGTCALW--DVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDK 219
Query: 72 TVRFWDLRTRGC 83
WD+R+ C
Sbjct: 220 KAMVWDMRSGQC 231
Score = 95 (38.5 bits), Expect = 0.00042, P = 0.00042
Identities = 27/72 (37%), Positives = 33/72 (45%)
Query: 9 VCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSG 67
+C S + +SGG D K V D +GQ QA H V S+ Y G SG
Sbjct: 199 LCLDLAPSETGNTFVSGGC-DKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASG 257
Query: 68 SHDRTVRFWDLR 79
S D T R +DLR
Sbjct: 258 SDDATCRLYDLR 269
>UNIPROTKB|A5PJS1 [details] [associations]
symbol:GNB5 "GNB5 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ
EMBL:DAAA02028995 EMBL:DAAA02028996 EMBL:BC142218 IPI:IPI00695391
RefSeq:NP_001092540.1 UniGene:Bt.48572 SMR:A5PJS1 MINT:MINT-6824860
STRING:A5PJS1 Ensembl:ENSBTAT00000004896 GeneID:535365
KEGG:bta:535365 InParanoid:A5PJS1 NextBio:20876717 Uniprot:A5PJS1
Length = 353
Score = 96 (38.9 bits), Expect = 0.00033, P = 0.00033
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 15 TSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLY---NWGGATVLSGSHDR 71
T++ +L + G G C ++ D +GQ Q+ GH VL L + G T +SG D+
Sbjct: 162 TNSDMQILTASGDGTCALW--DVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDK 219
Query: 72 TVRFWDLRTRGC 83
WD+R+ C
Sbjct: 220 KAMVWDMRSGQC 231
Score = 94 (38.1 bits), Expect = 0.00054, P = 0.00054
Identities = 26/72 (36%), Positives = 33/72 (45%)
Query: 9 VCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSG 67
+C S + +SGG D K V D +GQ QA H + S+ Y G SG
Sbjct: 199 LCLDLAPSETGNTFVSGGC-DKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASG 257
Query: 68 SHDRTVRFWDLR 79
S D T R +DLR
Sbjct: 258 SDDATCRLYDLR 269
>UNIPROTKB|Q6PNB6 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9986 "Oryctolagus cuniculus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:10681
OrthoDB:EOG4XWFXZ EMBL:AY591252 RefSeq:NP_001075639.1
UniGene:Ocu.3141 ProteinModelPortal:Q6PNB6 SMR:Q6PNB6
GeneID:100008941 Uniprot:Q6PNB6
Length = 353
Score = 96 (38.9 bits), Expect = 0.00033, P = 0.00033
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 15 TSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSLY---NWGGATVLSGSHDR 71
T++ +L + G G C ++ D +GQ Q+ GH VL L + G T +SG D+
Sbjct: 162 TNSDMQILTASGDGTCALW--DVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDK 219
Query: 72 TVRFWDLRTRGC 83
WD+R+ C
Sbjct: 220 KAMVWDMRSGQC 231
Score = 94 (38.1 bits), Expect = 0.00054, P = 0.00054
Identities = 26/72 (36%), Positives = 33/72 (45%)
Query: 9 VCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWGGATVLSG 67
+C S + +SGG D K V D +GQ QA H + S+ Y G SG
Sbjct: 199 LCLDLAPSETGNTFVSGGC-DKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASG 257
Query: 68 SHDRTVRFWDLR 79
S D T R +DLR
Sbjct: 258 SDDATCRLYDLR 269
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 95 (38.5 bits), Expect = 0.00033, P = 0.00033
Identities = 28/87 (32%), Positives = 41/87 (47%)
Query: 2 HDGTVRDVCFIEDTSNKSSLLISGGAGDCKIYVTDCATGQAFQALSGHSGHVLSL-YNWG 60
H G V F D +LL + G C +YV +G+ L+GH G V S ++
Sbjct: 25 HHGEVNCSAFSPDGR---TLLTASDDG-C-VYVWGTKSGRLLWRLAGHRGPVKSCCFSPD 79
Query: 61 GATVLSGSHDRTVRFWDLRTRGCTNVL 87
G + S S D ++R WD+ C +VL
Sbjct: 80 GRLIASSSSDHSIRLWDVARSKCLHVL 106
WARNING: HSPs involving 87 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.437 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 93 93 0.00091 102 3 11 22 0.49 29
29 0.41 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 337
No. of states in DFA: 532 (57 KB)
Total size of DFA: 116 KB (2077 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.44u 0.09s 10.53t Elapsed: 00:00:01
Total cpu time: 10.46u 0.09s 10.55t Elapsed: 00:00:01
Start: Thu Aug 15 11:42:43 2013 End: Thu Aug 15 11:42:44 2013
WARNINGS ISSUED: 2