Query psy14458
Match_columns 125
No_of_seqs 142 out of 1859
Neff 11.5
Searched_HMMs 46136
Date Fri Aug 16 20:21:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14458.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14458hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0263|consensus 100.0 4.2E-27 9.2E-32 156.2 13.1 123 1-123 466-610 (707)
2 KOG0272|consensus 99.9 3.6E-27 7.8E-32 148.0 10.4 123 1-123 234-378 (459)
3 KOG0279|consensus 99.9 2.6E-25 5.7E-30 133.7 13.7 123 1-123 78-225 (315)
4 KOG0271|consensus 99.9 4.1E-25 8.9E-30 137.9 11.8 122 1-122 220-441 (480)
5 KOG0263|consensus 99.9 9.8E-24 2.1E-28 140.4 11.4 121 1-121 508-650 (707)
6 KOG0272|consensus 99.9 3.2E-24 7E-29 134.9 7.8 124 1-124 190-337 (459)
7 KOG0285|consensus 99.9 3E-23 6.5E-28 128.8 12.0 123 1-123 166-310 (460)
8 KOG0266|consensus 99.9 4.7E-23 1E-27 136.1 13.7 103 1-123 218-321 (456)
9 KOG0271|consensus 99.9 7.7E-23 1.7E-27 127.9 13.5 121 1-122 130-278 (480)
10 KOG0295|consensus 99.9 1.2E-22 2.6E-27 126.0 13.6 123 1-123 208-367 (406)
11 KOG0286|consensus 99.9 5.3E-23 1.1E-27 124.7 11.5 103 1-123 159-262 (343)
12 PTZ00421 coronin; Provisional 99.9 4.4E-22 9.6E-27 131.9 14.8 103 1-123 91-201 (493)
13 KOG0315|consensus 99.9 3E-22 6.6E-27 119.3 12.5 78 46-123 213-291 (311)
14 KOG0315|consensus 99.9 4.7E-22 1E-26 118.5 12.0 121 1-122 13-156 (311)
15 KOG0278|consensus 99.9 7.4E-22 1.6E-26 117.9 11.7 122 1-123 158-300 (334)
16 KOG0286|consensus 99.9 1.1E-21 2.4E-26 119.0 12.0 118 1-118 202-343 (343)
17 KOG0284|consensus 99.9 1.7E-22 3.6E-27 127.0 8.7 101 1-121 195-295 (464)
18 KOG0291|consensus 99.9 1.2E-21 2.6E-26 130.9 12.8 122 1-122 365-510 (893)
19 KOG0302|consensus 99.9 7.6E-22 1.6E-26 123.1 10.6 101 1-121 273-379 (440)
20 KOG0281|consensus 99.9 1.9E-22 4E-27 125.3 6.8 121 1-125 250-433 (499)
21 KOG0273|consensus 99.9 6.1E-21 1.3E-25 121.8 13.6 123 1-123 332-485 (524)
22 KOG0266|consensus 99.9 1.1E-20 2.4E-25 124.9 13.4 103 1-123 261-367 (456)
23 KOG0269|consensus 99.9 2.4E-21 5.1E-26 129.5 8.8 102 1-122 149-252 (839)
24 PTZ00420 coronin; Provisional 99.9 5.6E-20 1.2E-24 123.1 14.7 102 1-123 90-200 (568)
25 KOG0284|consensus 99.9 3.3E-21 7.1E-26 121.2 8.3 123 1-123 111-255 (464)
26 KOG0295|consensus 99.9 2.2E-20 4.8E-25 116.1 11.6 100 1-120 307-406 (406)
27 KOG0275|consensus 99.9 1.1E-21 2.3E-26 121.2 5.5 102 1-122 278-380 (508)
28 KOG0316|consensus 99.8 2.3E-20 4.9E-25 110.7 10.4 102 2-123 33-134 (307)
29 KOG0319|consensus 99.8 2E-20 4.4E-25 124.5 11.3 103 1-123 478-580 (775)
30 KOG0279|consensus 99.8 3.8E-20 8.2E-25 111.7 11.0 101 1-123 165-265 (315)
31 KOG0292|consensus 99.8 2.4E-20 5.1E-25 126.8 10.6 122 1-122 24-167 (1202)
32 KOG0276|consensus 99.8 6.6E-20 1.4E-24 120.8 12.2 123 1-123 70-218 (794)
33 KOG0645|consensus 99.8 2.7E-19 5.9E-24 107.7 13.3 120 1-120 30-180 (312)
34 KOG0313|consensus 99.8 3.9E-20 8.4E-25 115.5 9.8 104 1-125 274-381 (423)
35 KOG0305|consensus 99.8 7.1E-20 1.5E-24 119.5 11.4 123 1-123 232-379 (484)
36 KOG0319|consensus 99.8 4.8E-20 1E-24 122.8 10.5 123 1-123 380-538 (775)
37 KOG0273|consensus 99.8 1.5E-19 3.3E-24 115.5 12.0 119 1-120 374-523 (524)
38 KOG0276|consensus 99.8 2.7E-20 5.9E-25 122.6 8.9 102 1-122 156-259 (794)
39 PTZ00421 coronin; Provisional 99.8 3.8E-19 8.3E-24 118.1 14.4 104 1-124 141-249 (493)
40 KOG0277|consensus 99.8 1.5E-19 3.3E-24 108.1 11.1 105 1-125 120-226 (311)
41 KOG0264|consensus 99.8 2E-19 4.4E-24 114.0 11.9 101 1-121 243-348 (422)
42 KOG0289|consensus 99.8 2.4E-19 5.1E-24 113.8 12.0 121 2-122 277-421 (506)
43 KOG0274|consensus 99.8 3.9E-19 8.5E-24 118.7 13.4 119 1-122 264-402 (537)
44 KOG1407|consensus 99.8 4.2E-19 9.1E-24 106.6 11.6 79 46-124 187-265 (313)
45 KOG0318|consensus 99.8 5E-19 1.1E-23 114.6 12.4 102 1-122 163-267 (603)
46 KOG0282|consensus 99.8 8.3E-20 1.8E-24 116.8 7.7 101 1-122 230-332 (503)
47 KOG0316|consensus 99.8 5.8E-19 1.2E-23 104.8 10.6 122 1-122 74-259 (307)
48 KOG0772|consensus 99.8 1.6E-19 3.5E-24 116.7 8.9 110 1-125 284-399 (641)
49 KOG0305|consensus 99.8 1.7E-18 3.6E-23 113.2 13.5 122 1-122 316-463 (484)
50 KOG0264|consensus 99.8 3.4E-19 7.4E-24 113.0 9.6 105 1-125 193-308 (422)
51 KOG0281|consensus 99.8 2.2E-19 4.7E-24 111.8 8.4 118 1-122 210-390 (499)
52 KOG0267|consensus 99.8 6.2E-20 1.3E-24 122.2 6.2 121 1-121 85-227 (825)
53 KOG0643|consensus 99.8 1.9E-18 4.2E-23 104.1 11.7 122 1-123 67-223 (327)
54 PTZ00420 coronin; Provisional 99.8 5E-18 1.1E-22 113.9 14.6 103 1-124 141-252 (568)
55 PLN00181 protein SPA1-RELATED; 99.8 4.6E-18 9.9E-23 119.0 14.8 102 1-123 548-651 (793)
56 KOG0291|consensus 99.8 4.9E-18 1.1E-22 113.9 14.1 122 1-122 280-424 (893)
57 KOG0270|consensus 99.8 5.5E-18 1.2E-22 107.7 13.2 121 1-121 259-405 (463)
58 KOG1446|consensus 99.8 1.2E-17 2.5E-22 102.2 14.0 124 1-124 115-266 (311)
59 KOG0641|consensus 99.8 4.6E-18 9.9E-23 100.9 11.7 110 1-123 197-306 (350)
60 KOG0265|consensus 99.8 2.4E-18 5.1E-23 104.9 10.6 121 1-121 105-247 (338)
61 KOG0283|consensus 99.8 9.4E-19 2E-23 117.6 9.3 83 38-122 359-442 (712)
62 KOG0302|consensus 99.8 4E-18 8.8E-23 106.7 11.1 121 2-122 169-334 (440)
63 KOG0294|consensus 99.8 3.2E-18 6.9E-23 105.0 10.3 103 1-123 56-160 (362)
64 KOG0647|consensus 99.8 3.7E-18 7.9E-23 104.3 10.4 102 1-123 43-148 (347)
65 cd00200 WD40 WD40 domain, foun 99.8 4.8E-17 1E-21 100.2 15.3 122 1-122 66-209 (289)
66 KOG0283|consensus 99.8 4.9E-18 1.1E-22 114.2 10.7 100 1-122 383-483 (712)
67 KOG0296|consensus 99.8 4.6E-17 1E-21 101.5 14.1 123 1-123 79-223 (399)
68 KOG0292|consensus 99.8 1.1E-17 2.3E-22 114.2 11.9 123 1-123 108-283 (1202)
69 KOG0277|consensus 99.8 6.3E-18 1.4E-22 101.3 9.5 104 1-124 76-182 (311)
70 KOG0640|consensus 99.8 2E-17 4.3E-22 101.9 11.5 119 1-119 127-290 (430)
71 KOG0640|consensus 99.8 4.7E-18 1E-22 104.6 8.6 123 1-123 187-338 (430)
72 cd00200 WD40 WD40 domain, foun 99.8 7.9E-17 1.7E-21 99.2 14.1 117 2-118 151-289 (289)
73 KOG0303|consensus 99.8 8.9E-18 1.9E-22 105.8 9.7 102 1-123 97-206 (472)
74 PLN00181 protein SPA1-RELATED; 99.8 1.5E-16 3.3E-21 111.4 16.6 119 1-121 591-739 (793)
75 KOG0265|consensus 99.8 1.8E-17 3.9E-22 101.2 10.2 102 1-122 62-165 (338)
76 KOG0285|consensus 99.8 9.9E-18 2.1E-22 104.6 9.2 101 1-122 250-350 (460)
77 KOG0322|consensus 99.8 1.4E-17 3E-22 100.3 9.5 119 1-119 168-322 (323)
78 KOG0294|consensus 99.8 8.8E-17 1.9E-21 98.8 13.0 121 1-122 100-283 (362)
79 KOG0310|consensus 99.8 1E-17 2.2E-22 107.4 8.9 103 1-123 83-187 (487)
80 KOG0288|consensus 99.8 4.5E-17 9.7E-22 103.0 11.5 116 1-117 315-458 (459)
81 KOG0308|consensus 99.7 1.7E-17 3.8E-22 109.7 9.9 110 1-121 133-244 (735)
82 KOG0282|consensus 99.7 8.4E-18 1.8E-22 107.8 7.9 101 1-122 273-374 (503)
83 KOG0313|consensus 99.7 1.6E-16 3.5E-21 99.6 13.1 121 1-123 118-292 (423)
84 KOG0318|consensus 99.7 1E-16 2.2E-21 104.0 12.5 103 1-123 205-353 (603)
85 KOG1034|consensus 99.7 2.6E-17 5.7E-22 101.6 9.2 101 1-121 108-212 (385)
86 KOG0274|consensus 99.7 5.9E-17 1.3E-21 108.4 10.5 119 2-123 305-444 (537)
87 KOG0275|consensus 99.7 3.8E-18 8.2E-23 105.7 4.3 111 1-123 228-339 (508)
88 KOG1446|consensus 99.7 6.7E-16 1.5E-20 94.7 13.8 120 1-122 29-172 (311)
89 KOG0300|consensus 99.7 5E-17 1.1E-21 100.6 8.9 104 1-125 287-391 (481)
90 KOG1445|consensus 99.7 2.6E-17 5.5E-22 109.4 7.9 105 1-125 643-755 (1012)
91 KOG0310|consensus 99.7 3E-16 6.5E-21 100.8 11.5 101 1-123 126-228 (487)
92 KOG0296|consensus 99.7 2.7E-16 5.8E-21 98.2 10.7 98 1-120 301-398 (399)
93 KOG0645|consensus 99.7 1.6E-15 3.6E-20 91.7 13.5 120 1-120 76-225 (312)
94 KOG1036|consensus 99.7 9.1E-16 2E-20 94.0 12.3 120 1-124 28-167 (323)
95 KOG0293|consensus 99.7 8.2E-17 1.8E-21 102.1 8.1 102 3-122 412-515 (519)
96 KOG0639|consensus 99.7 5.2E-17 1.1E-21 105.4 6.6 105 1-125 480-586 (705)
97 KOG0268|consensus 99.7 1.8E-16 3.9E-21 99.1 8.5 124 1-125 82-264 (433)
98 KOG4283|consensus 99.7 4.4E-16 9.5E-21 95.4 9.6 101 1-122 117-221 (397)
99 KOG0300|consensus 99.7 4E-16 8.8E-21 96.6 9.1 121 2-122 164-346 (481)
100 KOG0289|consensus 99.7 2.9E-15 6.2E-20 95.6 12.4 123 1-123 234-380 (506)
101 KOG0267|consensus 99.7 2.5E-16 5.4E-21 105.4 7.9 122 1-122 43-186 (825)
102 KOG4283|consensus 99.7 6.7E-16 1.4E-20 94.6 9.2 103 1-123 161-279 (397)
103 KOG0268|consensus 99.7 3.4E-16 7.3E-21 97.9 8.0 120 1-121 203-346 (433)
104 KOG1332|consensus 99.7 2.8E-15 6.1E-20 89.7 11.4 122 1-122 26-195 (299)
105 KOG0293|consensus 99.7 7.6E-16 1.7E-20 97.8 9.2 102 1-122 239-344 (519)
106 KOG2110|consensus 99.7 4.8E-15 1E-19 92.8 12.4 96 7-122 152-250 (391)
107 KOG1408|consensus 99.7 1.4E-15 3E-20 102.4 10.5 104 1-121 611-714 (1080)
108 KOG0306|consensus 99.7 8.1E-16 1.7E-20 103.5 9.2 102 1-122 80-181 (888)
109 KOG2111|consensus 99.7 1.6E-14 3.4E-19 89.1 14.1 78 45-122 178-258 (346)
110 KOG0306|consensus 99.7 6.6E-16 1.4E-20 103.9 8.8 101 1-121 565-665 (888)
111 KOG0308|consensus 99.7 1.8E-15 3.8E-20 100.5 10.6 102 1-122 186-287 (735)
112 KOG0269|consensus 99.7 6.4E-16 1.4E-20 104.1 8.4 103 1-123 103-210 (839)
113 KOG0973|consensus 99.7 1.5E-15 3.3E-20 104.9 10.3 117 1-120 84-201 (942)
114 KOG0772|consensus 99.7 1.3E-15 2.8E-20 99.1 9.3 122 1-122 182-349 (641)
115 KOG1407|consensus 99.6 6.7E-15 1.5E-19 88.7 10.2 69 53-121 152-220 (313)
116 KOG0646|consensus 99.6 7.1E-15 1.5E-19 94.2 10.8 102 1-123 191-310 (476)
117 KOG2096|consensus 99.6 4.4E-15 9.6E-20 91.9 9.5 100 1-121 202-309 (420)
118 KOG0646|consensus 99.6 4.4E-15 9.5E-20 95.2 9.6 101 2-122 97-208 (476)
119 KOG1273|consensus 99.6 7.9E-15 1.7E-19 90.6 10.2 99 1-120 38-137 (405)
120 KOG1332|consensus 99.6 2.5E-15 5.4E-20 89.9 7.7 122 1-122 73-243 (299)
121 KOG0301|consensus 99.6 5E-15 1.1E-19 98.8 9.8 116 1-120 115-249 (745)
122 KOG1539|consensus 99.6 4.8E-15 1E-19 100.6 9.6 100 1-121 549-649 (910)
123 KOG0973|consensus 99.6 6.1E-15 1.3E-19 102.0 10.1 113 1-122 28-161 (942)
124 KOG1274|consensus 99.6 3.9E-14 8.4E-19 97.1 13.4 121 1-121 111-263 (933)
125 KOG0649|consensus 99.6 6.5E-14 1.4E-18 84.1 12.8 123 1-123 25-189 (325)
126 KOG1539|consensus 99.6 5.4E-15 1.2E-19 100.4 9.2 122 2-123 464-609 (910)
127 KOG0299|consensus 99.6 1.5E-14 3.2E-19 92.7 10.7 120 1-122 217-358 (479)
128 KOG0288|consensus 99.6 1.7E-14 3.6E-19 91.6 10.6 75 48-122 341-419 (459)
129 KOG2048|consensus 99.6 4.5E-14 9.9E-19 94.0 12.6 103 1-123 83-187 (691)
130 KOG1036|consensus 99.6 2.7E-14 5.9E-19 87.6 10.7 122 1-123 109-265 (323)
131 KOG4378|consensus 99.6 1.2E-14 2.5E-19 94.5 9.6 124 1-125 94-285 (673)
132 KOG0301|consensus 99.6 1.4E-14 3E-19 96.7 10.0 117 1-121 74-209 (745)
133 KOG1274|consensus 99.6 3.6E-14 7.8E-19 97.2 11.9 103 1-123 69-171 (933)
134 KOG2394|consensus 99.6 6.2E-15 1.3E-19 96.3 7.9 80 1-100 305-384 (636)
135 KOG4328|consensus 99.6 5.3E-14 1.2E-18 90.3 11.3 120 1-120 203-399 (498)
136 KOG1273|consensus 99.6 8.9E-15 1.9E-19 90.4 7.4 73 51-123 26-98 (405)
137 PF08662 eIF2A: Eukaryotic tra 99.6 1.2E-13 2.7E-18 82.2 12.0 72 49-122 101-181 (194)
138 KOG0647|consensus 99.6 2.9E-14 6.2E-19 87.5 9.4 122 1-123 130-284 (347)
139 KOG0643|consensus 99.6 9.8E-14 2.1E-18 84.1 11.5 123 1-123 25-180 (327)
140 KOG0299|consensus 99.6 3E-14 6.6E-19 91.3 9.4 118 2-121 158-275 (479)
141 KOG1007|consensus 99.6 2.9E-14 6.4E-19 87.2 8.7 100 3-122 188-291 (370)
142 KOG0278|consensus 99.6 5.3E-15 1.1E-19 88.9 5.4 123 1-123 32-176 (334)
143 KOG0270|consensus 99.6 9.1E-15 2E-19 93.3 6.3 119 1-121 195-318 (463)
144 KOG1009|consensus 99.6 4.3E-14 9.2E-19 89.5 9.1 112 1-123 29-156 (434)
145 KOG0303|consensus 99.6 8.4E-14 1.8E-18 88.2 10.2 104 1-125 147-254 (472)
146 KOG1188|consensus 99.6 6.5E-14 1.4E-18 87.1 9.3 122 1-122 43-198 (376)
147 KOG1445|consensus 99.6 6.5E-14 1.4E-18 93.6 9.8 111 1-125 95-205 (1012)
148 KOG1408|consensus 99.5 3.6E-13 7.9E-18 91.1 13.0 123 1-123 519-674 (1080)
149 KOG0290|consensus 99.5 2.4E-13 5.3E-18 83.3 11.0 104 1-124 166-322 (364)
150 KOG0642|consensus 99.5 7.7E-14 1.7E-18 91.4 9.2 102 1-122 309-428 (577)
151 KOG2394|consensus 99.5 7.3E-14 1.6E-18 91.4 9.1 74 49-122 291-364 (636)
152 KOG2445|consensus 99.5 1.9E-13 4.2E-18 84.2 10.0 118 1-119 129-317 (361)
153 KOG0321|consensus 99.5 6.2E-14 1.3E-18 93.1 8.2 103 1-123 115-251 (720)
154 KOG0641|consensus 99.5 6.2E-13 1.3E-17 79.3 11.4 100 1-120 246-349 (350)
155 KOG0307|consensus 99.5 1E-13 2.2E-18 96.7 9.2 123 1-123 132-287 (1049)
156 TIGR03866 PQQ_ABC_repeats PQQ- 99.5 1.1E-12 2.4E-17 82.2 13.3 100 1-122 4-105 (300)
157 KOG0650|consensus 99.5 2.2E-13 4.8E-18 90.2 10.3 74 51-125 569-642 (733)
158 KOG0639|consensus 99.5 4.2E-14 9.1E-19 92.1 6.6 100 2-122 525-624 (705)
159 KOG1272|consensus 99.5 3.6E-14 7.9E-19 91.3 5.6 104 1-124 224-327 (545)
160 KOG2106|consensus 99.5 2.8E-12 6.1E-17 83.7 12.9 115 1-118 383-519 (626)
161 KOG1524|consensus 99.5 2.6E-13 5.6E-18 89.1 8.1 99 1-101 119-238 (737)
162 KOG0649|consensus 99.5 2.5E-12 5.5E-17 77.4 11.3 100 1-123 129-238 (325)
163 KOG0644|consensus 99.5 2.3E-14 4.9E-19 97.9 2.7 96 1-120 205-300 (1113)
164 KOG3881|consensus 99.5 2.1E-12 4.5E-17 81.7 10.3 102 1-122 219-322 (412)
165 TIGR03866 PQQ_ABC_repeats PQQ- 99.4 1E-11 2.2E-16 77.9 12.6 108 2-123 173-282 (300)
166 KOG1063|consensus 99.4 1.5E-12 3.2E-17 87.4 9.0 95 8-122 552-650 (764)
167 KOG2919|consensus 99.4 5.5E-12 1.2E-16 78.5 10.8 125 1-125 126-286 (406)
168 KOG0307|consensus 99.4 9.1E-13 2E-17 92.1 8.3 123 1-123 177-330 (1049)
169 KOG2110|consensus 99.4 8E-12 1.7E-16 78.7 11.2 76 49-124 130-208 (391)
170 KOG1188|consensus 99.4 6.8E-12 1.5E-16 78.3 10.7 123 1-123 87-245 (376)
171 KOG0321|consensus 99.4 1.1E-12 2.5E-17 87.3 7.4 108 1-122 67-177 (720)
172 KOG0771|consensus 99.4 4.4E-12 9.6E-17 80.7 9.5 72 49-120 282-354 (398)
173 KOG2055|consensus 99.4 1.3E-11 2.8E-16 79.7 10.8 121 1-122 228-376 (514)
174 KOG1007|consensus 99.4 6E-12 1.3E-16 77.3 8.5 104 6-125 142-250 (370)
175 KOG2106|consensus 99.4 4.9E-11 1.1E-15 78.1 12.6 76 46-122 366-479 (626)
176 KOG1034|consensus 99.4 2.1E-12 4.5E-17 80.3 5.9 100 1-119 151-278 (385)
177 KOG2445|consensus 99.4 5.9E-11 1.3E-15 73.5 12.1 101 1-121 28-145 (361)
178 KOG2139|consensus 99.4 4.5E-11 9.8E-16 75.5 11.6 118 1-119 113-267 (445)
179 KOG1009|consensus 99.3 4.8E-12 1E-16 80.4 6.2 113 1-120 80-195 (434)
180 COG2319 FOG: WD40 repeat [Gene 99.3 1.5E-10 3.3E-15 74.6 13.0 98 5-122 131-231 (466)
181 PF00400 WD40: WD domain, G-be 99.3 1.2E-11 2.5E-16 55.0 5.5 38 81-118 2-39 (39)
182 KOG1310|consensus 99.3 1.7E-11 3.7E-16 81.0 7.5 102 1-122 65-180 (758)
183 KOG2055|consensus 99.3 6.3E-11 1.4E-15 76.6 9.7 72 49-121 345-418 (514)
184 KOG0771|consensus 99.3 1.2E-11 2.7E-16 78.7 6.3 70 52-122 148-217 (398)
185 KOG2919|consensus 99.3 6.3E-11 1.4E-15 73.9 9.2 75 47-121 249-328 (406)
186 KOG1963|consensus 99.3 1.9E-10 4.1E-15 79.0 12.1 79 46-124 203-285 (792)
187 KOG4227|consensus 99.3 1.7E-10 3.7E-15 73.9 10.8 104 1-124 71-183 (609)
188 KOG3914|consensus 99.3 5.4E-11 1.2E-15 75.5 8.1 79 45-124 148-227 (390)
189 KOG1524|consensus 99.3 7.5E-11 1.6E-15 77.9 9.0 120 1-122 78-218 (737)
190 COG2319 FOG: WD40 repeat [Gene 99.3 6E-10 1.3E-14 71.8 13.2 101 2-123 171-274 (466)
191 KOG2096|consensus 99.3 6.1E-10 1.3E-14 69.6 12.4 71 48-119 187-257 (420)
192 KOG0280|consensus 99.2 2.6E-10 5.6E-15 70.3 9.8 80 46-125 163-246 (339)
193 KOG1310|consensus 99.2 9.6E-11 2.1E-15 77.6 8.2 78 44-121 46-126 (758)
194 KOG2048|consensus 99.2 8.4E-10 1.8E-14 74.3 12.6 101 1-121 40-141 (691)
195 KOG0642|consensus 99.2 1.4E-10 3E-15 76.6 8.8 74 49-122 490-563 (577)
196 PF08662 eIF2A: Eukaryotic tra 99.2 1.4E-09 3.1E-14 64.9 12.6 71 49-122 60-135 (194)
197 KOG1587|consensus 99.2 1.3E-10 2.8E-15 78.4 8.0 99 2-121 415-517 (555)
198 KOG0290|consensus 99.2 9.7E-10 2.1E-14 67.9 11.0 109 1-110 212-356 (364)
199 KOG4328|consensus 99.2 3.4E-10 7.3E-15 73.2 9.3 106 1-123 338-453 (498)
200 KOG1063|consensus 99.2 1.6E-10 3.4E-15 78.0 8.0 78 45-122 522-604 (764)
201 KOG2321|consensus 99.2 5.8E-10 1.3E-14 74.2 10.1 75 49-123 176-261 (703)
202 KOG1272|consensus 99.2 1.5E-10 3.4E-15 75.1 7.0 94 2-118 267-360 (545)
203 PF02239 Cytochrom_D1: Cytochr 99.1 4E-09 8.7E-14 68.7 12.9 100 2-122 10-110 (369)
204 KOG1523|consensus 99.1 9.2E-10 2E-14 68.6 9.2 122 1-122 70-238 (361)
205 KOG1517|consensus 99.1 1.3E-09 2.8E-14 77.0 10.9 103 1-122 1180-1289(1387)
206 KOG0322|consensus 99.1 8.6E-11 1.9E-15 71.5 4.2 58 1-78 266-323 (323)
207 KOG0650|consensus 99.1 3E-10 6.4E-15 75.8 7.0 97 1-117 622-732 (733)
208 KOG4378|consensus 99.1 2.4E-10 5.1E-15 75.0 6.4 121 4-124 8-155 (673)
209 KOG1538|consensus 99.1 4.3E-10 9.3E-15 76.3 7.5 71 49-120 13-83 (1081)
210 KOG1523|consensus 99.1 1.5E-09 3.2E-14 67.7 9.2 74 48-121 55-131 (361)
211 PF00400 WD40: WD domain, G-be 99.1 4.1E-10 8.9E-15 49.9 5.1 28 49-76 12-39 (39)
212 KOG1240|consensus 99.1 6.8E-09 1.5E-13 74.3 12.9 76 49-124 1196-1277(1431)
213 KOG3881|consensus 99.1 2.2E-09 4.9E-14 68.3 9.3 112 1-123 164-280 (412)
214 KOG1517|consensus 99.1 2.7E-09 5.8E-14 75.5 10.0 103 1-122 1224-1335(1387)
215 KOG1587|consensus 99.1 7.2E-09 1.6E-13 70.2 11.5 77 49-125 243-328 (555)
216 KOG4547|consensus 99.0 2.1E-08 4.6E-13 66.7 12.3 121 1-123 8-175 (541)
217 KOG2315|consensus 99.0 2E-08 4.4E-13 66.6 11.8 112 8-122 251-392 (566)
218 KOG1538|consensus 99.0 1.4E-08 3.1E-13 69.2 11.3 118 1-120 147-293 (1081)
219 PF11768 DUF3312: Protein of u 99.0 5.4E-09 1.2E-13 69.7 9.1 73 46-120 257-329 (545)
220 KOG1963|consensus 99.0 2.1E-08 4.6E-13 69.3 12.0 103 1-120 220-322 (792)
221 KOG4714|consensus 99.0 1.2E-09 2.5E-14 66.6 4.9 73 49-121 180-255 (319)
222 KOG0974|consensus 99.0 1.5E-08 3.3E-13 71.2 10.8 98 2-121 149-247 (967)
223 KOG4547|consensus 99.0 2E-08 4.2E-13 66.8 10.6 99 1-121 117-221 (541)
224 KOG4227|consensus 98.9 2.9E-08 6.3E-13 63.9 10.0 107 1-125 120-230 (609)
225 KOG2139|consensus 98.9 6E-08 1.3E-12 61.8 10.7 86 5-110 215-300 (445)
226 KOG2321|consensus 98.9 2.1E-08 4.6E-13 67.0 8.8 114 1-123 190-305 (703)
227 PRK01742 tolB translocation pr 98.9 7.1E-08 1.5E-12 64.2 10.6 71 49-122 204-282 (429)
228 KOG0644|consensus 98.9 1.5E-09 3.2E-14 75.1 2.5 79 45-123 187-265 (1113)
229 KOG0280|consensus 98.8 1.7E-08 3.6E-13 62.5 6.3 99 1-121 181-285 (339)
230 KOG1064|consensus 98.8 2.4E-08 5.1E-13 74.1 8.0 118 2-122 2224-2368(2439)
231 PRK11028 6-phosphogluconolacto 98.8 5.3E-07 1.2E-11 58.0 12.9 98 2-121 6-111 (330)
232 PRK11028 6-phosphogluconolacto 98.8 5.1E-07 1.1E-11 58.0 12.4 73 49-121 175-259 (330)
233 KOG0974|consensus 98.8 2.2E-07 4.7E-12 65.6 10.8 107 2-124 103-209 (967)
234 KOG2111|consensus 98.8 9E-07 1.9E-11 55.6 12.1 61 1-79 196-257 (346)
235 KOG1240|consensus 98.7 1.2E-07 2.5E-12 68.3 9.0 80 42-121 1042-1129(1431)
236 KOG4640|consensus 98.7 1.8E-07 4E-12 63.2 9.2 74 49-123 21-95 (665)
237 PRK01742 tolB translocation pr 98.7 6.6E-07 1.4E-11 59.6 11.5 68 52-120 251-322 (429)
238 COG4946 Uncharacterized protei 98.7 1.7E-06 3.8E-11 57.2 12.9 100 2-122 375-479 (668)
239 KOG1645|consensus 98.7 1.7E-07 3.8E-12 60.4 7.9 81 43-124 188-270 (463)
240 KOG4190|consensus 98.7 2.4E-07 5.2E-12 62.4 8.7 123 1-123 750-909 (1034)
241 PRK05137 tolB translocation pr 98.7 1.8E-06 3.9E-11 57.7 12.6 74 48-122 201-280 (435)
242 KOG2695|consensus 98.6 2.7E-07 5.9E-12 58.6 7.7 100 2-122 268-378 (425)
243 KOG4497|consensus 98.6 1.2E-06 2.5E-11 55.6 9.9 88 2-110 65-153 (447)
244 KOG1064|consensus 98.6 1.7E-07 3.6E-12 69.9 6.8 109 3-122 2268-2400(2439)
245 PRK05137 tolB translocation pr 98.6 4.6E-06 1E-10 55.7 12.6 73 49-122 246-324 (435)
246 PRK04922 tolB translocation pr 98.6 6.5E-06 1.4E-10 55.0 13.1 73 50-123 293-371 (433)
247 PRK04922 tolB translocation pr 98.6 2.4E-06 5.2E-11 57.1 10.9 74 49-123 204-283 (433)
248 KOG2066|consensus 98.5 1.8E-06 4E-11 60.0 9.9 98 1-123 86-190 (846)
249 PRK02889 tolB translocation pr 98.5 4E-06 8.6E-11 55.9 11.4 71 48-119 195-269 (427)
250 PRK03629 tolB translocation pr 98.5 8.7E-06 1.9E-10 54.4 13.0 73 49-122 287-365 (429)
251 smart00320 WD40 WD40 repeats. 98.5 5.1E-07 1.1E-11 38.6 5.1 38 81-118 3-40 (40)
252 KOG1409|consensus 98.5 3.5E-07 7.5E-12 58.0 5.9 39 83-121 357-395 (404)
253 PRK03629 tolB translocation pr 98.5 7.8E-06 1.7E-10 54.6 12.6 72 50-122 244-321 (429)
254 KOG1334|consensus 98.5 3.3E-07 7.1E-12 60.4 5.5 74 49-122 394-468 (559)
255 PF02239 Cytochrom_D1: Cytochr 98.5 1.3E-05 2.7E-10 52.6 12.8 100 2-122 52-160 (369)
256 KOG1409|consensus 98.5 1.8E-06 3.8E-11 54.9 8.4 96 27-122 173-272 (404)
257 KOG4532|consensus 98.5 1.5E-05 3.3E-10 49.4 11.4 74 50-123 160-236 (344)
258 TIGR02800 propeller_TolB tol-p 98.4 2.4E-05 5.1E-10 51.9 12.1 73 49-122 190-268 (417)
259 PRK00178 tolB translocation pr 98.4 2.8E-05 6.1E-10 51.9 12.5 74 49-123 199-278 (430)
260 TIGR02658 TTQ_MADH_Hv methylam 98.4 4.2E-05 9.1E-10 49.8 12.6 94 8-123 27-139 (352)
261 PRK02889 tolB translocation pr 98.4 2.9E-05 6.3E-10 51.9 12.2 73 49-122 284-362 (427)
262 TIGR02800 propeller_TolB tol-p 98.3 5.3E-05 1.1E-09 50.3 12.9 72 50-122 279-356 (417)
263 PLN02919 haloacid dehalogenase 98.3 4.8E-05 1E-09 56.1 13.6 73 51-123 806-891 (1057)
264 KOG4714|consensus 98.3 7.8E-06 1.7E-10 50.4 7.1 98 1-118 195-316 (319)
265 KOG0309|consensus 98.3 2.1E-06 4.6E-11 59.6 5.2 103 1-123 130-235 (1081)
266 KOG2695|consensus 98.2 2.6E-06 5.6E-11 54.3 4.7 73 49-122 253-331 (425)
267 KOG4497|consensus 98.2 6.4E-06 1.4E-10 52.4 6.3 74 49-122 49-124 (447)
268 KOG1275|consensus 98.2 1.3E-05 2.8E-10 56.9 8.3 69 50-122 179-256 (1118)
269 KOG1912|consensus 98.2 3.4E-05 7.5E-10 54.1 10.0 103 1-123 82-189 (1062)
270 smart00320 WD40 WD40 repeats. 98.2 9E-06 2E-10 34.4 5.0 28 49-76 13-40 (40)
271 KOG1912|consensus 98.2 2.5E-05 5.5E-10 54.8 9.0 112 3-124 30-147 (1062)
272 PRK00178 tolB translocation pr 98.2 0.00014 2.9E-09 48.7 12.3 72 50-122 244-321 (430)
273 PF15492 Nbas_N: Neuroblastoma 98.2 0.00039 8.5E-09 43.5 13.6 76 47-122 146-261 (282)
274 KOG3621|consensus 98.2 1.4E-05 3.1E-10 55.1 7.6 101 1-121 48-155 (726)
275 KOG4640|consensus 98.2 2E-05 4.3E-10 53.8 8.1 52 49-100 62-115 (665)
276 KOG2041|consensus 98.2 1.1E-05 2.5E-10 56.1 7.1 115 1-120 29-145 (1189)
277 KOG4190|consensus 98.2 2E-06 4.2E-11 58.2 3.4 79 40-120 727-812 (1034)
278 PRK01029 tolB translocation pr 98.1 0.00016 3.5E-09 48.5 11.8 73 51-123 283-362 (428)
279 KOG1354|consensus 98.1 2.8E-05 6.1E-10 49.8 7.6 120 1-121 101-245 (433)
280 PRK04792 tolB translocation pr 98.1 0.00012 2.7E-09 49.3 11.1 76 46-122 215-296 (448)
281 KOG4532|consensus 98.1 0.00028 6E-09 44.1 11.4 75 49-123 204-285 (344)
282 PF14783 BBS2_Mid: Ciliary BBS 98.1 0.00026 5.7E-09 38.3 10.9 88 1-115 18-109 (111)
283 PRK01029 tolB translocation pr 98.1 0.00026 5.6E-09 47.5 12.2 73 49-122 327-405 (428)
284 PRK04792 tolB translocation pr 98.1 0.00026 5.6E-09 47.8 12.2 71 51-122 264-340 (448)
285 KOG1354|consensus 98.1 3.8E-05 8.2E-10 49.2 7.5 113 2-123 230-362 (433)
286 KOG1334|consensus 98.1 7.9E-06 1.7E-10 54.2 4.5 76 44-119 138-216 (559)
287 PF11768 DUF3312: Protein of u 98.0 3.3E-05 7.1E-10 52.3 6.9 57 1-79 274-330 (545)
288 TIGR03300 assembly_YfgL outer 98.0 0.00035 7.5E-09 45.9 11.6 98 2-123 69-166 (377)
289 PF12894 Apc4_WD40: Anaphase-p 98.0 3.8E-05 8.1E-10 35.2 5.0 33 49-82 12-44 (47)
290 TIGR03300 assembly_YfgL outer 98.0 0.00018 3.8E-09 47.3 10.1 58 59-117 319-376 (377)
291 TIGR02658 TTQ_MADH_Hv methylam 98.0 0.0012 2.5E-08 43.3 12.9 71 52-123 251-333 (352)
292 KOG4649|consensus 97.9 0.00046 9.9E-09 43.1 9.8 72 49-122 53-125 (354)
293 KOG1275|consensus 97.9 0.00053 1.1E-08 49.2 11.0 118 1-118 190-340 (1118)
294 PLN02919 haloacid dehalogenase 97.9 0.00094 2E-08 49.6 12.7 74 49-122 740-835 (1057)
295 PF13360 PQQ_2: PQQ-like domai 97.9 0.00032 7E-09 42.9 8.9 97 6-123 1-97 (238)
296 KOG3914|consensus 97.8 5.4E-05 1.2E-09 49.0 5.1 40 47-87 193-232 (390)
297 PF13360 PQQ_2: PQQ-like domai 97.8 0.00049 1.1E-08 42.1 8.9 100 2-123 40-143 (238)
298 PF12894 Apc4_WD40: Anaphase-p 97.8 0.00022 4.7E-09 32.7 5.5 30 90-119 11-40 (47)
299 PF08553 VID27: VID27 cytoplas 97.8 0.0018 4E-08 46.4 12.4 69 48-118 577-645 (794)
300 KOG2444|consensus 97.8 0.0002 4.4E-09 43.5 6.7 63 59-121 113-178 (238)
301 PRK04043 tolB translocation pr 97.8 0.0043 9.3E-08 41.7 13.6 74 49-123 233-312 (419)
302 PF14783 BBS2_Mid: Ciliary BBS 97.7 0.0016 3.4E-08 35.4 9.4 67 51-121 2-72 (111)
303 KOG1645|consensus 97.7 0.00028 6E-09 46.2 6.7 59 2-81 210-269 (463)
304 KOG2315|consensus 97.6 0.0028 6E-08 43.2 10.9 72 48-122 270-346 (566)
305 KOG0309|consensus 97.6 0.00037 8E-09 49.1 6.9 80 46-125 112-193 (1081)
306 KOG3617|consensus 97.6 0.00023 4.9E-09 50.9 5.8 72 49-120 60-131 (1416)
307 COG5170 CDC55 Serine/threonine 97.6 0.00049 1.1E-08 43.9 6.5 78 43-121 167-253 (460)
308 PF10282 Lactonase: Lactonase, 97.6 0.0041 8.9E-08 40.6 11.0 73 49-121 37-118 (345)
309 COG5170 CDC55 Serine/threonine 97.6 0.00027 5.8E-09 45.1 5.3 76 49-125 222-314 (460)
310 KOG2066|consensus 97.5 0.0014 3E-08 46.4 8.9 60 57-118 80-144 (846)
311 PF15492 Nbas_N: Neuroblastoma 97.5 0.0021 4.5E-08 40.3 8.8 67 54-121 3-74 (282)
312 PF10168 Nup88: Nuclear pore c 97.5 0.013 2.8E-07 42.1 13.6 78 48-125 84-184 (717)
313 KOG2041|consensus 97.5 0.00066 1.4E-08 47.8 7.2 74 49-122 15-103 (1189)
314 KOG2079|consensus 97.5 0.00062 1.3E-08 49.6 7.2 69 48-118 130-201 (1206)
315 KOG1832|consensus 97.5 0.00025 5.4E-09 51.0 5.1 77 46-122 1099-1177(1516)
316 KOG0882|consensus 97.5 0.0018 3.9E-08 43.2 8.6 76 48-123 144-234 (558)
317 PRK04043 tolB translocation pr 97.5 0.011 2.4E-07 39.8 12.3 72 50-122 189-267 (419)
318 KOG2314|consensus 97.5 0.002 4.3E-08 44.1 8.6 72 49-121 250-335 (698)
319 PRK02888 nitrous-oxide reducta 97.5 0.0049 1.1E-07 43.1 10.5 73 48-121 320-405 (635)
320 KOG4649|consensus 97.4 0.005 1.1E-07 38.6 9.4 34 54-87 99-132 (354)
321 PF04762 IKI3: IKI3 family; I 97.4 0.0024 5.2E-08 46.9 9.1 70 51-122 259-335 (928)
322 PRK02888 nitrous-oxide reducta 97.4 0.0075 1.6E-07 42.3 10.6 61 59-122 287-353 (635)
323 COG2706 3-carboxymuconate cycl 97.3 0.017 3.6E-07 37.5 13.8 95 28-122 63-177 (346)
324 PRK11138 outer membrane biogen 97.3 0.012 2.7E-07 39.1 11.0 58 60-119 335-393 (394)
325 PF10282 Lactonase: Lactonase, 97.3 0.02 4.3E-07 37.5 13.6 76 47-122 85-176 (345)
326 PF07433 DUF1513: Protein of u 97.3 0.0075 1.6E-07 38.7 9.1 56 54-109 56-117 (305)
327 COG5354 Uncharacterized protei 97.3 0.0091 2E-07 40.5 9.7 72 49-122 316-397 (561)
328 PF08450 SGL: SMP-30/Gluconola 97.1 0.025 5.3E-07 35.1 11.1 71 49-121 86-165 (246)
329 COG5354 Uncharacterized protei 97.1 0.0033 7.2E-08 42.5 6.4 72 49-123 33-119 (561)
330 KOG2314|consensus 97.0 0.0079 1.7E-07 41.4 7.7 82 8-107 282-363 (698)
331 COG4946 Uncharacterized protei 97.0 0.055 1.2E-06 36.9 11.9 74 49-123 360-434 (668)
332 PRK11138 outer membrane biogen 97.0 0.03 6.5E-07 37.3 10.4 100 2-123 124-226 (394)
333 PF10313 DUF2415: Uncharacteri 97.0 0.0059 1.3E-07 27.3 4.9 32 91-122 1-35 (43)
334 PF04762 IKI3: IKI3 family; I 97.0 0.08 1.7E-06 39.4 13.0 71 47-118 74-148 (928)
335 KOG2114|consensus 96.9 0.043 9.2E-07 39.8 10.9 76 48-123 125-204 (933)
336 KOG1832|consensus 96.9 0.0011 2.4E-08 47.9 3.2 99 1-123 1116-1217(1516)
337 KOG2395|consensus 96.9 0.026 5.7E-07 38.8 9.3 67 50-118 432-498 (644)
338 KOG2079|consensus 96.9 0.0029 6.2E-08 46.4 5.1 64 59-122 98-162 (1206)
339 PF14655 RAB3GAP2_N: Rab3 GTPa 96.8 0.034 7.5E-07 37.4 9.3 76 49-124 308-402 (415)
340 PF07569 Hira: TUP1-like enhan 96.8 0.032 6.9E-07 34.3 8.6 64 56-120 18-95 (219)
341 PF07433 DUF1513: Protein of u 96.8 0.067 1.5E-06 34.5 10.6 86 5-110 74-182 (305)
342 PF00930 DPPIV_N: Dipeptidyl p 96.7 0.013 2.7E-07 38.5 6.8 62 49-111 43-121 (353)
343 KOG1008|consensus 96.6 0.00081 1.7E-08 46.6 0.9 71 49-121 155-227 (783)
344 cd00216 PQQ_DH Dehydrogenases 96.6 0.057 1.2E-06 37.2 9.6 56 68-123 364-427 (488)
345 COG0823 TolB Periplasmic compo 96.5 0.055 1.2E-06 36.6 8.9 71 51-122 240-316 (425)
346 KOG0882|consensus 96.5 0.097 2.1E-06 35.5 9.6 58 64-121 116-175 (558)
347 KOG3621|consensus 96.5 0.017 3.8E-07 40.6 6.5 77 49-125 34-111 (726)
348 PF04053 Coatomer_WDAD: Coatom 96.4 0.07 1.5E-06 36.4 9.0 55 60-118 117-171 (443)
349 PF10313 DUF2415: Uncharacteri 96.4 0.027 5.9E-07 25.2 4.9 30 50-79 2-34 (43)
350 KOG1920|consensus 96.4 0.062 1.3E-06 40.4 8.9 71 50-121 243-323 (1265)
351 KOG1900|consensus 96.3 0.17 3.7E-06 38.5 10.9 116 5-121 96-273 (1311)
352 KOG2114|consensus 96.2 0.061 1.3E-06 39.0 8.2 67 51-117 68-152 (933)
353 PF03178 CPSF_A: CPSF A subuni 96.2 0.16 3.5E-06 32.9 9.6 69 50-120 131-202 (321)
354 cd00216 PQQ_DH Dehydrogenases 96.1 0.21 4.5E-06 34.5 10.1 63 61-123 111-186 (488)
355 KOG1008|consensus 96.1 0.002 4.3E-08 44.8 0.6 72 49-121 196-276 (783)
356 COG3490 Uncharacterized protei 96.0 0.12 2.6E-06 33.2 8.0 56 55-110 120-181 (366)
357 PF08450 SGL: SMP-30/Gluconola 96.0 0.18 4E-06 31.2 11.7 73 49-121 134-214 (246)
358 TIGR03074 PQQ_membr_DH membran 95.9 0.45 9.8E-06 34.9 12.2 117 2-123 198-347 (764)
359 PF08553 VID27: VID27 cytoplas 95.7 0.037 7.9E-07 40.2 5.5 55 1-77 591-646 (794)
360 KOG1920|consensus 95.7 0.19 4.2E-06 38.0 9.0 69 49-118 69-137 (1265)
361 PF00780 CNH: CNH domain; Int 95.6 0.13 2.8E-06 32.4 7.3 62 58-122 5-66 (275)
362 COG3391 Uncharacterized conser 95.6 0.39 8.5E-06 32.1 12.3 72 50-122 117-192 (381)
363 KOG4499|consensus 95.4 0.35 7.5E-06 30.3 8.9 49 52-100 215-263 (310)
364 PF04053 Coatomer_WDAD: Coatom 95.4 0.19 4.2E-06 34.3 7.7 49 6-77 124-172 (443)
365 COG0823 TolB Periplasmic compo 95.4 0.42 9.1E-06 32.5 9.2 84 39-123 183-273 (425)
366 PF14781 BBS2_N: Ciliary BBSom 95.4 0.24 5.2E-06 28.1 11.0 106 1-121 13-126 (136)
367 PF02897 Peptidase_S9_N: Proly 95.2 0.43 9.3E-06 32.1 8.9 72 50-122 125-212 (414)
368 PF00930 DPPIV_N: Dipeptidyl p 95.2 0.1 2.3E-06 34.3 5.9 64 57-122 1-73 (353)
369 KOG2395|consensus 95.2 0.6 1.3E-05 32.6 9.3 55 64-119 398-458 (644)
370 KOG4460|consensus 95.0 0.78 1.7E-05 32.2 11.6 75 49-123 104-201 (741)
371 PF11715 Nup160: Nucleoporin N 94.8 0.32 6.9E-06 34.0 7.8 66 58-123 156-251 (547)
372 PF03178 CPSF_A: CPSF A subuni 94.8 0.56 1.2E-05 30.4 8.4 93 8-122 2-117 (321)
373 PF06433 Me-amine-dh_H: Methyl 94.8 0.21 4.6E-06 32.8 6.3 40 49-88 289-330 (342)
374 PF04841 Vps16_N: Vps16, N-ter 94.6 0.88 1.9E-05 30.9 9.7 50 71-122 62-111 (410)
375 PF00780 CNH: CNH domain; Int 94.6 0.68 1.5E-05 29.2 10.1 98 1-121 10-123 (275)
376 PF12234 Rav1p_C: RAVE protein 94.5 1.2 2.7E-05 31.9 10.7 67 53-119 34-103 (631)
377 KOG3617|consensus 94.5 0.19 4E-06 37.1 5.9 33 46-78 99-131 (1416)
378 PF04841 Vps16_N: Vps16, N-ter 94.2 1.2 2.5E-05 30.3 10.3 54 49-102 217-271 (410)
379 PF11715 Nup160: Nucleoporin N 94.2 0.26 5.7E-06 34.5 6.2 38 49-86 215-256 (547)
380 TIGR03075 PQQ_enz_alc_DH PQQ-d 94.1 1.4 3E-05 31.0 11.3 64 60-123 120-192 (527)
381 COG2706 3-carboxymuconate cycl 94.1 1.1 2.3E-05 29.6 12.3 73 49-121 40-120 (346)
382 KOG3630|consensus 94.0 0.22 4.7E-06 37.7 5.7 59 49-108 199-261 (1405)
383 TIGR03075 PQQ_enz_alc_DH PQQ-d 94.0 1.5 3.2E-05 30.9 9.5 31 59-89 471-501 (527)
384 PRK13616 lipoprotein LpqB; Pro 93.9 1.5 3.3E-05 31.3 9.4 63 50-116 398-472 (591)
385 PF08596 Lgl_C: Lethal giant l 93.8 1.4 3E-05 29.9 9.3 72 50-122 3-117 (395)
386 COG5167 VID27 Protein involved 93.7 1.4 3.1E-05 30.9 8.6 60 60-120 573-632 (776)
387 KOG2444|consensus 93.6 0.2 4.3E-06 31.0 4.1 59 2-79 118-178 (238)
388 PF08596 Lgl_C: Lethal giant l 93.5 1.6 3.4E-05 29.6 9.0 71 48-119 86-172 (395)
389 PF06433 Me-amine-dh_H: Methyl 93.4 0.53 1.2E-05 31.0 6.1 51 72-123 271-323 (342)
390 PF07569 Hira: TUP1-like enhan 93.2 0.91 2E-05 28.0 6.8 75 2-83 26-100 (219)
391 PF14269 Arylsulfotran_2: Aryl 93.1 1.5 3.4E-05 28.4 8.1 72 49-120 144-220 (299)
392 PF02897 Peptidase_S9_N: Proly 93.0 1.9 4.1E-05 29.1 9.2 70 53-122 174-262 (414)
393 PF05694 SBP56: 56kDa selenium 92.4 2.5 5.5E-05 29.1 9.9 35 91-125 312-347 (461)
394 KOG3630|consensus 92.3 0.32 6.9E-06 36.9 4.3 70 49-119 156-227 (1405)
395 PF14761 HPS3_N: Hermansky-Pud 92.1 1.8 3.9E-05 26.7 7.9 47 61-108 29-77 (215)
396 PF14870 PSII_BNR: Photosynthe 92.1 2.3 4.9E-05 27.8 9.7 69 49-118 145-213 (302)
397 PF14583 Pectate_lyase22: Olig 92.0 1.8 3.8E-05 29.2 7.2 69 55-123 42-113 (386)
398 KOG1916|consensus 92.0 0.19 4.1E-06 37.2 2.9 35 56-90 243-282 (1283)
399 PF01011 PQQ: PQQ enzyme repea 91.9 0.53 1.2E-05 20.2 3.9 26 62-87 2-27 (38)
400 smart00564 PQQ beta-propeller 91.8 0.47 1E-05 19.3 4.0 26 61-86 7-32 (33)
401 PF08728 CRT10: CRT10; InterP 91.6 4.1 9E-05 29.9 10.3 116 1-119 117-245 (717)
402 PF12657 TFIIIC_delta: Transcr 91.6 1.8 3.8E-05 25.6 8.6 30 92-121 87-122 (173)
403 PF06977 SdiA-regulated: SdiA- 91.4 2.4 5.2E-05 26.8 8.9 71 49-120 22-94 (248)
404 COG3386 Gluconolactonase [Carb 91.4 2.8 6E-05 27.4 10.8 72 49-120 163-243 (307)
405 PF15390 DUF4613: Domain of un 91.2 2.7 5.9E-05 30.0 7.6 66 53-119 117-185 (671)
406 PRK10115 protease 2; Provision 91.1 3.1 6.8E-05 30.4 8.2 72 49-122 127-209 (686)
407 PF10168 Nup88: Nuclear pore c 91.0 4.9 0.00011 29.6 10.4 34 46-79 144-180 (717)
408 KOG2377|consensus 90.6 4.4 9.5E-05 28.3 8.2 70 51-121 25-97 (657)
409 COG3204 Uncharacterized protei 90.3 3.6 7.7E-05 26.8 8.4 73 49-121 86-159 (316)
410 PRK13616 lipoprotein LpqB; Pro 90.1 5.5 0.00012 28.6 9.8 69 48-118 447-523 (591)
411 PHA02713 hypothetical protein; 89.9 3.4 7.4E-05 29.3 7.5 63 59-123 463-536 (557)
412 KOG2247|consensus 89.9 0.16 3.4E-06 35.0 1.0 53 54-106 123-175 (615)
413 TIGR02276 beta_rpt_yvtn 40-res 89.7 0.96 2.1E-05 19.4 5.8 31 58-88 1-32 (42)
414 COG5308 NUP170 Nuclear pore co 89.4 7.2 0.00016 29.6 8.7 73 46-120 179-275 (1263)
415 PF05096 Glu_cyclase_2: Glutam 88.8 4.5 9.7E-05 25.9 9.9 93 7-123 109-206 (264)
416 PF05096 Glu_cyclase_2: Glutam 88.8 4.5 9.8E-05 25.9 11.1 53 67-122 107-159 (264)
417 PF12234 Rav1p_C: RAVE protein 88.4 7.8 0.00017 28.2 12.0 92 6-119 49-155 (631)
418 TIGR03118 PEPCTERM_chp_1 conse 88.2 5.6 0.00012 26.2 8.6 71 49-119 23-117 (336)
419 PF07676 PD40: WD40-like Beta 87.9 1.4 2.9E-05 18.8 5.2 29 89-117 7-38 (39)
420 COG4590 ABC-type uncharacteriz 87.8 7.5 0.00016 27.2 8.7 71 51-123 319-389 (733)
421 PF13570 PQQ_3: PQQ-like domai 87.3 1.5 3.3E-05 18.8 4.8 21 101-121 20-40 (40)
422 PF03088 Str_synth: Strictosid 87.2 1.4 3E-05 23.2 3.3 18 49-66 57-74 (89)
423 PHA02713 hypothetical protein; 86.3 10 0.00022 27.1 9.3 51 59-111 351-408 (557)
424 PF12768 Rax2: Cortical protei 85.5 5.9 0.00013 25.6 6.0 54 69-122 15-74 (281)
425 KOG4441|consensus 85.3 7.6 0.00017 27.8 7.0 62 59-121 332-405 (571)
426 COG3490 Uncharacterized protei 85.0 8.6 0.00019 25.2 8.3 63 49-111 162-246 (366)
427 PF03088 Str_synth: Strictosid 84.9 4.1 8.8E-05 21.4 6.8 50 67-117 34-85 (89)
428 COG1520 FOG: WD40-like repeat 84.9 9.3 0.0002 25.5 9.6 31 59-90 111-141 (370)
429 PF11635 Med16: Mediator compl 84.9 4 8.7E-05 30.2 5.7 68 2-73 275-345 (753)
430 PHA03098 kelch-like protein; P 84.7 12 0.00025 26.4 8.8 49 72-122 458-513 (534)
431 PF11635 Med16: Mediator compl 84.4 12 0.00026 27.9 7.8 67 49-115 260-345 (753)
432 COG3391 Uncharacterized conser 84.2 10 0.00023 25.5 12.4 70 52-122 163-241 (381)
433 KOG1916|consensus 84.1 0.53 1.2E-05 35.1 1.1 68 51-119 183-264 (1283)
434 PF01436 NHL: NHL repeat; Int 82.6 2.3 5E-05 16.8 4.1 23 94-116 5-27 (28)
435 COG3386 Gluconolactonase [Carb 82.1 12 0.00026 24.6 7.6 71 49-120 111-193 (307)
436 PF10214 Rrn6: RNA polymerase 82.1 19 0.00041 26.9 9.8 74 49-123 146-235 (765)
437 PF08801 Nucleoporin_N: Nup133 81.5 8.4 0.00018 26.2 5.9 31 49-79 190-220 (422)
438 TIGR03074 PQQ_membr_DH membran 81.2 21 0.00045 26.8 9.0 64 60-123 194-281 (764)
439 PF14655 RAB3GAP2_N: Rab3 GTPa 80.8 9.5 0.00021 26.2 5.8 35 89-123 306-340 (415)
440 PF15390 DUF4613: Domain of un 80.4 20 0.00042 26.1 9.2 40 39-78 146-186 (671)
441 TIGR02171 Fb_sc_TIGR02171 Fibr 79.8 21 0.00045 27.3 7.5 75 31-105 331-413 (912)
442 COG4880 Secreted protein conta 79.6 18 0.00039 25.2 9.2 80 46-125 425-508 (603)
443 PF12341 DUF3639: Protein of u 79.6 3.2 7E-05 16.5 3.6 25 49-75 2-26 (27)
444 KOG4460|consensus 78.8 22 0.00047 25.6 8.2 37 47-83 164-203 (741)
445 PF10647 Gmad1: Lipoprotein Lp 78.7 14 0.0003 23.4 7.9 63 50-112 113-187 (253)
446 PHA03098 kelch-like protein; P 78.7 20 0.00044 25.2 9.4 63 59-122 342-416 (534)
447 PF07995 GSDH: Glucose / Sorbo 78.7 16 0.00035 24.1 6.8 67 49-115 253-330 (331)
448 PF14870 PSII_BNR: Photosynthe 78.0 17 0.00036 23.9 10.7 63 48-111 186-253 (302)
449 KOG3611|consensus 77.8 22 0.00049 26.5 7.2 68 49-116 408-489 (737)
450 PHA02790 Kelch-like protein; P 75.7 25 0.00053 24.7 9.4 64 59-122 318-386 (480)
451 KOG2109|consensus 75.7 6.8 0.00015 28.6 4.1 73 41-113 308-391 (788)
452 COG3204 Uncharacterized protei 75.6 20 0.00044 23.6 8.1 74 48-121 180-264 (316)
453 PHA02790 Kelch-like protein; P 75.6 25 0.00054 24.6 9.3 59 59-122 407-472 (480)
454 COG5167 VID27 Protein involved 75.3 13 0.00029 26.5 5.3 56 1-78 576-632 (776)
455 TIGR02171 Fb_sc_TIGR02171 Fibr 75.0 24 0.00052 27.0 6.7 53 69-122 328-387 (912)
456 smart00036 CNH Domain found in 74.7 21 0.00045 23.3 8.1 58 61-120 14-73 (302)
457 KOG2727|consensus 73.0 2.8 6.2E-05 31.6 1.9 71 52-124 325-410 (1244)
458 PF08728 CRT10: CRT10; InterP 72.9 37 0.0008 25.4 10.9 71 49-120 101-195 (717)
459 PF06977 SdiA-regulated: SdiA- 72.2 22 0.00048 22.6 10.8 73 49-121 65-148 (248)
460 PF01731 Arylesterase: Arylest 70.5 13 0.00029 19.3 6.2 29 93-121 56-85 (86)
461 TIGR02608 delta_60_rpt delta-6 70.5 10 0.00022 18.0 4.2 17 93-109 3-19 (55)
462 KOG2247|consensus 70.4 0.19 4.2E-06 34.6 -3.9 72 49-122 75-149 (615)
463 KOG3616|consensus 70.2 22 0.00047 26.9 5.6 32 49-80 15-46 (1636)
464 PF14779 BBS1: Ciliary BBSome 70.1 26 0.00057 22.5 5.7 28 1-28 198-225 (257)
465 KOG1897|consensus 69.3 52 0.0011 25.6 9.1 52 67-118 845-896 (1096)
466 PRK13684 Ycf48-like protein; P 68.4 32 0.00069 22.8 8.4 64 49-115 173-238 (334)
467 PF14761 HPS3_N: Hermansky-Pud 68.4 26 0.00057 21.8 10.0 42 5-67 35-78 (215)
468 PF08309 LVIVD: LVIVD repeat; 67.3 10 0.00022 16.8 4.8 30 94-125 5-34 (42)
469 TIGR02604 Piru_Ver_Nterm putat 67.1 35 0.00077 22.9 9.6 69 49-119 14-98 (367)
470 KOG2280|consensus 66.8 53 0.0011 24.8 8.3 29 50-79 85-113 (829)
471 PF14779 BBS1: Ciliary BBSome 66.7 31 0.00068 22.2 7.8 68 49-117 177-255 (257)
472 COG3823 Glutamine cyclotransfe 66.3 30 0.00065 21.8 6.5 49 68-119 109-157 (262)
473 PF10647 Gmad1: Lipoprotein Lp 64.9 33 0.00072 21.7 8.5 70 49-118 66-142 (253)
474 PF03022 MRJP: Major royal jel 64.6 36 0.00079 22.1 8.3 60 49-108 186-253 (287)
475 PF12768 Rax2: Cortical protei 64.0 38 0.00082 22.1 10.2 69 49-118 37-121 (281)
476 KOG3522|consensus 63.9 50 0.0011 25.2 6.3 62 49-113 627-691 (925)
477 TIGR03606 non_repeat_PQQ dehyd 63.8 49 0.0011 23.3 7.1 53 49-101 30-89 (454)
478 PF10584 Proteasome_A_N: Prote 63.4 2 4.4E-05 16.4 -0.2 8 97-104 7-14 (23)
479 PF07995 GSDH: Glucose / Sorbo 62.8 42 0.00091 22.2 8.6 58 50-109 3-71 (331)
480 PF06739 SBBP: Beta-propeller 62.6 12 0.00027 16.0 3.4 22 49-70 13-34 (38)
481 KOG1898|consensus 62.0 78 0.0017 25.0 7.2 71 50-120 539-618 (1205)
482 TIGR03118 PEPCTERM_chp_1 conse 61.7 45 0.00098 22.2 8.4 76 6-100 220-307 (336)
483 KOG3616|consensus 61.5 18 0.0004 27.3 4.0 33 91-123 15-47 (1636)
484 COG1520 FOG: WD40-like repeat 61.1 47 0.001 22.2 7.2 62 61-123 69-132 (370)
485 PF05787 DUF839: Bacterial pro 59.9 62 0.0013 23.2 6.7 20 89-108 500-519 (524)
486 PF08801 Nucleoporin_N: Nup133 57.6 21 0.00046 24.4 3.7 31 91-121 190-220 (422)
487 PF14781 BBS2_N: Ciliary BBSom 56.7 36 0.00079 19.6 9.2 66 55-122 5-83 (136)
488 PF07250 Glyoxal_oxid_N: Glyox 55.7 38 0.00083 21.6 4.3 48 73-120 49-99 (243)
489 PF14583 Pectate_lyase22: Olig 54.0 70 0.0015 22.0 8.1 54 53-106 85-140 (386)
490 KOG4441|consensus 53.6 84 0.0018 22.8 6.4 62 60-122 285-359 (571)
491 COG4257 Vgb Streptogramin lyas 53.2 64 0.0014 21.3 7.0 64 47-110 60-123 (353)
492 KOG4499|consensus 52.4 62 0.0013 20.9 8.7 75 49-123 158-244 (310)
493 COG4257 Vgb Streptogramin lyas 52.4 67 0.0014 21.3 6.6 76 47-122 187-264 (353)
494 PF08954 DUF1900: Domain of un 52.3 28 0.0006 20.0 3.1 31 92-122 12-43 (136)
495 KOG2109|consensus 51.9 15 0.00033 26.9 2.3 46 72-117 297-343 (788)
496 KOG3535|consensus 50.5 60 0.0013 22.6 4.7 54 64-123 96-154 (557)
497 KOG2467|consensus 49.9 13 0.00029 25.3 1.7 18 1-18 344-361 (477)
498 COG3211 PhoX Predicted phospha 49.3 94 0.002 22.8 5.6 58 51-108 502-571 (616)
499 PF13418 Kelch_4: Galactose ox 48.9 25 0.00055 15.5 2.5 23 100-122 11-39 (49)
500 TIGR03606 non_repeat_PQQ dehyd 48.8 94 0.002 22.0 7.3 53 60-113 369-428 (454)
No 1
>KOG0263|consensus
Probab=99.95 E-value=4.2e-27 Score=156.18 Aligned_cols=123 Identities=24% Similarity=0.373 Sum_probs=113.4
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccc----------------------cCCCCCeEEEEECC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAG----------------------TRQGSPVSALCVDP 58 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----------------------~~~~~~i~~~~~~~ 58 (125)
|+++++|+++|+|.+.+..++-.+++|..||..++|.+.....+ ..|-.-+.|+.|+|
T Consensus 466 LlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRifaghlsDV~cv~FHP 545 (707)
T KOG0263|consen 466 LLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHP 545 (707)
T ss_pred eeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchhhhcccccccceEEECC
Confidence 68999999999999999999999999999999999987544333 25557899999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+.+++++|+.|.++++||+.++..++.|.+|+++|.+++|+|+|++|++|+.|+.|.+||+.++.
T Consensus 546 Ns~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~ 610 (707)
T KOG0263|consen 546 NSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGS 610 (707)
T ss_pred cccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999998864
No 2
>KOG0272|consensus
Probab=99.95 E-value=3.6e-27 Score=148.02 Aligned_cols=123 Identities=26% Similarity=0.408 Sum_probs=113.4
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccc----------------------cCCCCCeEEEEECC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAG----------------------TRQGSPVSALCVDP 58 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----------------------~~~~~~i~~~~~~~ 58 (125)
|+||+.||++++|++.+..++..+.+|...|..+.|++...... -.|...|.+++|.|
T Consensus 234 lat~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~ 313 (459)
T KOG0272|consen 234 LATASADGTVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQP 313 (459)
T ss_pred eeeeccCCceeeeccCCCcchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecC
Confidence 68999999999999999899999999999999999987543222 27789999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+|.++++|+.|..-+|||++++.++-.+.+|.++|..+.|+|+|.++++|+.|++++|||++...
T Consensus 314 DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~ 378 (459)
T KOG0272|consen 314 DGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRS 378 (459)
T ss_pred CCceeeccCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccc
Confidence 99999999999999999999999999999999999999999999999999999999999998653
No 3
>KOG0279|consensus
Probab=99.94 E-value=2.6e-25 Score=133.69 Aligned_cols=123 Identities=24% Similarity=0.337 Sum_probs=109.7
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccccccc-----------------------CCCCCeEEEEEC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGT-----------------------RQGSPVSALCVD 57 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----------------------~~~~~i~~~~~~ 57 (125)
++++++|+++++||+.+++..+.|.+|...|.++.++........ .+...|+|+.|+
T Consensus 78 alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfs 157 (315)
T KOG0279|consen 78 ALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFS 157 (315)
T ss_pred EEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEc
Confidence 378999999999999999999999999999999999763322221 125789999999
Q ss_pred CC--CCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 58 PS--GRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 58 ~~--~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
|+ ...+++++.|++|++||+++.+....+.+|.+.++.+.++|||..+++|+.||.+.+||++.+.
T Consensus 158 P~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k 225 (315)
T KOG0279|consen 158 PNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGK 225 (315)
T ss_pred CCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCc
Confidence 98 6899999999999999999999999999999999999999999999999999999999998764
No 4
>KOG0271|consensus
Probab=99.93 E-value=4.1e-25 Score=137.92 Aligned_cols=122 Identities=25% Similarity=0.365 Sum_probs=107.6
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcc----------------------------------------
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYT---------------------------------------- 40 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~---------------------------------------- 40 (125)
|++++.||.|+|||+..++++..+.+|+.+|++++|-+..
T Consensus 220 las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTd 299 (480)
T KOG0271|consen 220 LASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEGLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTD 299 (480)
T ss_pred eecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccch
Confidence 5788999999999998888999999999999999984200
Q ss_pred ------------------------------------------------------------cccccCCCCCeEEEEECCCC
Q psy14458 41 ------------------------------------------------------------TEAGTRQGSPVSALCVDPSG 60 (125)
Q Consensus 41 ------------------------------------------------------------~~~~~~~~~~i~~~~~~~~~ 60 (125)
+.....|..-|+.+.|||++
T Consensus 300 y~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~ 379 (480)
T KOG0271|consen 300 YVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDG 379 (480)
T ss_pred hhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCc
Confidence 00112455779999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 61 RLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 61 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
.++++++-|+.|++||.++++.+.+|++|-+.|..++|+.|.+++++|+.|.++++|++++.
T Consensus 380 r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tk 441 (480)
T KOG0271|consen 380 RYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTK 441 (480)
T ss_pred cEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeee
Confidence 99999999999999999999999999999999999999999999999999999999999875
No 5
>KOG0263|consensus
Probab=99.91 E-value=9.8e-24 Score=140.41 Aligned_cols=121 Identities=29% Similarity=0.503 Sum_probs=112.1
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccc----------------------cCCCCCeEEEEECC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAG----------------------TRQGSPVSALCVDP 58 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----------------------~~~~~~i~~~~~~~ 58 (125)
|||++.|++.++|.....+++..+.+|...+.++.|++...... .+|..+|.++++||
T Consensus 508 Fatas~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp 587 (707)
T KOG0263|consen 508 FATASHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSP 587 (707)
T ss_pred EEecCCCceeeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcC
Confidence 68999999999999999999999999999999999987443222 37889999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
.|.+|++|++||.|.+||+.+++.+..+.+|++.|.++.|+.+|.+|++|+.|.+|++||+..
T Consensus 588 ~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~ 650 (707)
T KOG0263|consen 588 CGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTK 650 (707)
T ss_pred CCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchh
Confidence 999999999999999999999999999999999999999999999999999999999999864
No 6
>KOG0272|consensus
Probab=99.91 E-value=3.2e-24 Score=134.90 Aligned_cols=124 Identities=23% Similarity=0.293 Sum_probs=113.0
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcc-c-----------------------ccccCCCCCeEEEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYT-T-----------------------EAGTRQGSPVSALCV 56 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~-----------------------~~~~~~~~~i~~~~~ 56 (125)
|+||+.+|.+++|+..+...++.|.+|...+.++.|++.. - .....|...|..++|
T Consensus 190 laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~Vaf 269 (459)
T KOG0272|consen 190 LATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQDLEGHLARVSRVAF 269 (459)
T ss_pred EEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcchhhhhcchhhheeeee
Confidence 6899999999999999999999999999999999998752 1 111256688999999
Q ss_pred CCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCCC
Q psy14458 57 DPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTMR 124 (125)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~ 124 (125)
+|+|.+|++++-|.+-++||+++++.+...++|...|.+++|+|||.++++|+.|..-+|||+|++..
T Consensus 270 HPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~ 337 (459)
T KOG0272|consen 270 HPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRC 337 (459)
T ss_pred cCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhheeecccCcE
Confidence 99999999999999999999999999998999999999999999999999999999999999999853
No 7
>KOG0285|consensus
Probab=99.91 E-value=3e-23 Score=128.84 Aligned_cols=123 Identities=24% Similarity=0.346 Sum_probs=109.0
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcc----------------------cccccCCCCCeEEEEECC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYT----------------------TEAGTRQGSPVSALCVDP 58 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~----------------------~~~~~~~~~~i~~~~~~~ 58 (125)
|+||+.|++|+|||+.+++...++.+|-..++.+.+...- +...-.|-+.|.|++.+|
T Consensus 166 f~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~YhGHlS~V~~L~lhP 245 (460)
T KOG0285|consen 166 FATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHGHLSGVYCLDLHP 245 (460)
T ss_pred EEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhHHHhccccceeEEEeccc
Confidence 6899999999999999999999999998888888875311 122235668999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.-..+++|+.|..+++||+++...+..+.+|+..|..+.+.|-.-.+++||.|++|++||++.+.
T Consensus 246 Tldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agk 310 (460)
T KOG0285|consen 246 TLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGK 310 (460)
T ss_pred cceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCc
Confidence 99999999999999999999999999999999999999999977789999999999999998763
No 8
>KOG0266|consensus
Probab=99.91 E-value=4.7e-23 Score=136.06 Aligned_cols=103 Identities=28% Similarity=0.596 Sum_probs=97.3
Q ss_pred CeeecCCCeEEEEEC-CCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDI-RGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 79 (125)
+++++.|++|++||+ ..+..+.++.+|. ..+++++|+|.++++++|+.|++|++||+++
T Consensus 218 l~s~s~D~tiriwd~~~~~~~~~~l~gH~--------------------~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~ 277 (456)
T KOG0266|consen 218 LLSGSDDKTLRIWDLKDDGRNLKTLKGHS--------------------TYVTSVAFSPDGNLLVSGSDDGTVRIWDVRT 277 (456)
T ss_pred EEEecCCceEEEeeccCCCeEEEEecCCC--------------------CceEEEEecCCCCEEEEecCCCcEEEEeccC
Confidence 579999999999999 5557889999998 7889999999999999999999999999999
Q ss_pred CceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 80 SRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 80 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+++...+.+|...|++++|++++.++++++.|+.|++||+.++.
T Consensus 278 ~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~ 321 (456)
T KOG0266|consen 278 GECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGS 321 (456)
T ss_pred CeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCc
Confidence 99999999999999999999999999999999999999998875
No 9
>KOG0271|consensus
Probab=99.91 E-value=7.7e-23 Score=127.89 Aligned_cols=121 Identities=22% Similarity=0.305 Sum_probs=106.9
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccccc-----------------------ccCCCCCeEEEEEC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEA-----------------------GTRQGSPVSALCVD 57 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-----------------------~~~~~~~i~~~~~~ 57 (125)
|+||+.|.++++||+.+..+..+.++|..-|.++.|.+..... ..+|...|++++|.
T Consensus 130 l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawe 209 (480)
T KOG0271|consen 130 LVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWE 209 (480)
T ss_pred EEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeec
Confidence 6899999999999999999999999999999999997643322 24788999999998
Q ss_pred C-----CCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 58 P-----SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 58 ~-----~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
| ...++++++.||.++|||+..+.++..+.+|..+|+|++|-.+ .+|++|+.|++|++|+...+
T Consensus 210 p~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~-gliySgS~DrtIkvw~a~dG 278 (480)
T KOG0271|consen 210 PLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGE-GLIYSGSQDRTIKVWRALDG 278 (480)
T ss_pred ccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCC-ceEEecCCCceEEEEEccch
Confidence 7 4578999999999999999999999999999999999999544 48999999999999987553
No 10
>KOG0295|consensus
Probab=99.91 E-value=1.2e-22 Score=126.04 Aligned_cols=123 Identities=24% Similarity=0.364 Sum_probs=108.8
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccccc----------------------ccCCCCCeEEEEECC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEA----------------------GTRQGSPVSALCVDP 58 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----------------------~~~~~~~i~~~~~~~ 58 (125)
+++++.|.+|+.|+..++-++++|.+|..-++.++.+...... ...|..++.|++|-|
T Consensus 208 ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap 287 (406)
T KOG0295|consen 208 ILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAP 287 (406)
T ss_pred eeecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecc
Confidence 5799999999999999999999999999888888876533222 236778899999987
Q ss_pred C----------C-----CEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 59 S----------G-----RLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 59 ~----------~-----~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
. + .++++++.|++|++||+.++.++.++.+|.++|+.++|+|.|++|+++..|+++++||++++.
T Consensus 288 ~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~ 367 (406)
T KOG0295|consen 288 ESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQ 367 (406)
T ss_pred cccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccce
Confidence 3 2 488999999999999999999999999999999999999999999999999999999998864
No 11
>KOG0286|consensus
Probab=99.90 E-value=5.3e-23 Score=124.68 Aligned_cols=103 Identities=37% Similarity=0.609 Sum_probs=98.0
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECC-CCCEEEEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDP-SGRLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~i~~~d~~~ 79 (125)
|+|++.|.+..+||+++++.+..|.+|. .-|.+++++| +++.+++|+-|+..++||++.
T Consensus 159 ilT~SGD~TCalWDie~g~~~~~f~GH~--------------------gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~ 218 (343)
T KOG0286|consen 159 ILTGSGDMTCALWDIETGQQTQVFHGHT--------------------GDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRS 218 (343)
T ss_pred eEecCCCceEEEEEcccceEEEEecCCc--------------------ccEEEEecCCCCCCeEEecccccceeeeeccC
Confidence 5899999999999999999999999999 6678889999 889999999999999999999
Q ss_pred CceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 80 SRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 80 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+.+.+.|.+|...|++++|.|+|.-+++|+.|++.++||+|...
T Consensus 219 ~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~ 262 (343)
T KOG0286|consen 219 GQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQ 262 (343)
T ss_pred cceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCc
Confidence 99999999999999999999999999999999999999999854
No 12
>PTZ00421 coronin; Provisional
Probab=99.90 E-value=4.4e-22 Score=131.92 Aligned_cols=103 Identities=20% Similarity=0.368 Sum_probs=90.6
Q ss_pred CeeecCCCeEEEEECCCCc-------ceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCC-CEEEEEeCCCcE
Q psy14458 1 MVSGHEDSSCVLYDIRGSR-------PLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSG-RLMVSGHEDSSC 72 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i 72 (125)
|++|+.|++|++||+..+. ++..+.+|. ..|.+++|+|++ +++++++.|+.|
T Consensus 91 LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~--------------------~~V~~l~f~P~~~~iLaSgs~DgtV 150 (493)
T PTZ00421 91 LFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHT--------------------KKVGIVSFHPSAMNVLASAGADMVV 150 (493)
T ss_pred EEEEeCCCEEEEEecCCCccccccCcceEEecCCC--------------------CcEEEEEeCcCCCCEEEEEeCCCEE
Confidence 5899999999999997642 234445554 789999999985 799999999999
Q ss_pred EEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 73 VLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 73 ~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
++||+.+++.+..+..|...|.+++|+|++.++++++.|++|++||++++.
T Consensus 151 rIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~ 201 (493)
T PTZ00421 151 NVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGT 201 (493)
T ss_pred EEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCc
Confidence 999999999988899999999999999999999999999999999998753
No 13
>KOG0315|consensus
Probab=99.90 E-value=3e-22 Score=119.29 Aligned_cols=78 Identities=17% Similarity=0.217 Sum_probs=71.2
Q ss_pred CCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC-ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 46 RQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS-RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 46 ~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.|..-+..+.+||+.++|++++.|.+++||+..+. +....+.+|...|....|+.|+++|++++.|...++|+++.+.
T Consensus 213 ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k 291 (311)
T KOG0315|consen 213 AHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGK 291 (311)
T ss_pred cccceEEEEEECCCCcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCc
Confidence 56677889999999999999999999999999887 5566678999999999999999999999999999999998775
No 14
>KOG0315|consensus
Probab=99.89 E-value=4.7e-22 Score=118.48 Aligned_cols=121 Identities=18% Similarity=0.294 Sum_probs=106.2
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcc-----------------------cccccCCCCCeEEEEEC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYT-----------------------TEAGTRQGSPVSALCVD 57 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~-----------------------~~~~~~~~~~i~~~~~~ 57 (125)
|+|++.|.+|++|.+.+|.|..+++.....|+.+...+.. ......+...|+.+.|.
T Consensus 13 LvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~ 92 (311)
T KOG0315|consen 13 LVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGNQHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQ 92 (311)
T ss_pred EEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccCCeeEEEEccCCCCCceeEEeccCCceEEEEEe
Confidence 5899999999999999999999999888899988875422 22223566889999999
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 58 PSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 58 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
.+|+.+++|++||+++|||++...+-+.++ |..+|+++..+|+...|++|..+|.|++||+...
T Consensus 93 ~dgrWMyTgseDgt~kIWdlR~~~~qR~~~-~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~ 156 (311)
T KOG0315|consen 93 CDGRWMYTGSEDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHPNQTELISGDQSGNIRVWDLGEN 156 (311)
T ss_pred ecCeEEEecCCCceEEEEeccCcccchhcc-CCCCcceEEecCCcceEEeecCCCcEEEEEccCC
Confidence 999999999999999999999977666666 8899999999999999999999999999999865
No 15
>KOG0278|consensus
Probab=99.89 E-value=7.4e-22 Score=117.90 Aligned_cols=122 Identities=20% Similarity=0.334 Sum_probs=99.4
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccc--------------------cCCCCCeEEEEECCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAG--------------------TRQGSPVSALCVDPSG 60 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--------------------~~~~~~i~~~~~~~~~ 60 (125)
|+++..|+.||+||.++++.++.+. ...++.++.......... ..-+-.|.+..++|+.
T Consensus 158 iLSSadd~tVRLWD~rTgt~v~sL~-~~s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k 236 (334)
T KOG0278|consen 158 ILSSADDKTVRLWDHRTGTEVQSLE-FNSPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLLKSYKMPCNVESASLHPKK 236 (334)
T ss_pred EEeeccCCceEEEEeccCcEEEEEe-cCCCCcceeeccCCCEEEEecCceeEEeccccccceeeccCccccccccccCCC
Confidence 4677999999999999999888775 344455554433222211 2333568899999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCceeEEe-CCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 61 RLMVSGHEDSSCVLYDIRGSRPLQTF-KPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 61 ~~~~~~~~~~~i~~~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
..++.|++|..++.||..+++.+..+ ++|-++|.|+.|+|+|...++||+||+|++|.+..+.
T Consensus 237 ~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~ 300 (334)
T KOG0278|consen 237 EFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGK 300 (334)
T ss_pred ceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCC
Confidence 99999999999999999999998886 7999999999999999999999999999999876543
No 16
>KOG0286|consensus
Probab=99.88 E-value=1.1e-21 Score=118.97 Aligned_cols=118 Identities=26% Similarity=0.431 Sum_probs=106.8
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccccccc------------------------CCCCCeEEEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGT------------------------RQGSPVSALCV 56 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~------------------------~~~~~i~~~~~ 56 (125)
|++|+-|++.++||++.+.+.+.|.+|...|++++|.+....... ....+|++++|
T Consensus 202 FvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~F 281 (343)
T KOG0286|consen 202 FVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAF 281 (343)
T ss_pred EEecccccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEE
Confidence 589999999999999999999999999999999999764332221 22367999999
Q ss_pred CCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEe
Q psy14458 57 DPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTD 118 (125)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~ 118 (125)
|..|++++.|..|..+.+||...++.+..+.+|++.|+|+..+|||..+++|+=|.++++|.
T Consensus 282 S~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 282 SKSGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred cccccEEEeeecCCceeEeeccccceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 99999999999999999999999999999999999999999999999999999999999994
No 17
>KOG0284|consensus
Probab=99.88 E-value=1.7e-22 Score=126.98 Aligned_cols=101 Identities=25% Similarity=0.440 Sum_probs=96.1
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
|+|++.|++|+|||....+....+.+|. ..+.+++|+|+..++++++.|+.|++||.+++
T Consensus 195 F~t~SdDg~ikiWdf~~~kee~vL~GHg--------------------wdVksvdWHP~kgLiasgskDnlVKlWDprSg 254 (464)
T KOG0284|consen 195 FLTCSDDGTIKIWDFRMPKEERVLRGHG--------------------WDVKSVDWHPTKGLIASGSKDNLVKLWDPRSG 254 (464)
T ss_pred eEEecCCCeEEEEeccCCchhheeccCC--------------------CCcceeccCCccceeEEccCCceeEeecCCCc
Confidence 6899999999999999888888888888 77899999999999999999999999999999
Q ss_pred ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 81 RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
+++.++..|++.|..+.|+|++.+|+++|.|..++++|+++
T Consensus 255 ~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~ 295 (464)
T KOG0284|consen 255 SCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRT 295 (464)
T ss_pred chhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhH
Confidence 99999999999999999999999999999999999999984
No 18
>KOG0291|consensus
Probab=99.88 E-value=1.2e-21 Score=130.86 Aligned_cols=122 Identities=23% Similarity=0.424 Sum_probs=106.9
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccc-----------------------cCCCCCeEEEEEC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAG-----------------------TRQGSPVSALCVD 57 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-----------------------~~~~~~i~~~~~~ 57 (125)
++||+.|++|+|||..++-|..+|..|+..++.+.|........ ....-+..|++..
T Consensus 365 iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD 444 (893)
T KOG0291|consen 365 IATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVD 444 (893)
T ss_pred EEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEc
Confidence 58999999999999999999999999999999999864332222 1233467899999
Q ss_pred CCCCEEEEEeCCCc-EEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 58 PSGRLMVSGHEDSS-CVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 58 ~~~~~~~~~~~~~~-i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
|.|..+..|+.|.. |.+|++.+|+.+-.+.+|+++|.+++|+|++..|+++|-|.+|++||+-..
T Consensus 445 ~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s 510 (893)
T KOG0291|consen 445 PSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSS 510 (893)
T ss_pred CCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeecc
Confidence 99999999998876 999999999999999999999999999999999999999999999997543
No 19
>KOG0302|consensus
Probab=99.88 E-value=7.6e-22 Score=123.11 Aligned_cols=101 Identities=30% Similarity=0.473 Sum_probs=86.9
Q ss_pred CeeecCCCeEEEEECCCCcce--eeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPL--QTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIR 78 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~ 78 (125)
|++|+-|++|+|||++.++.. -..+.|. .-|+.|.|+....+|++|+.||+++|||++
T Consensus 273 faScS~DgsIrIWDiRs~~~~~~~~~kAh~--------------------sDVNVISWnr~~~lLasG~DdGt~~iwDLR 332 (440)
T KOG0302|consen 273 FASCSCDGSIRIWDIRSGPKKAAVSTKAHN--------------------SDVNVISWNRREPLLASGGDDGTLSIWDLR 332 (440)
T ss_pred EEeeecCceEEEEEecCCCccceeEeeccC--------------------CceeeEEccCCcceeeecCCCceEEEEEhh
Confidence 689999999999999987432 2225565 678888898888899999999999999998
Q ss_pred C---CceeEEeCCCCCceeEEEEcc-CCCeEEEeecCCeEEEEeCCC
Q psy14458 79 G---SRPLQTFKPHTADVRSIRFSP-SAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 79 ~---~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~i~~~~~~~ 121 (125)
. ++++..|+.|+.+|+++.|+| +...|++++.|.+|.+||+.-
T Consensus 333 ~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsv 379 (440)
T KOG0302|consen 333 QFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSV 379 (440)
T ss_pred hccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeec
Confidence 7 578899999999999999999 567888899999999999864
No 20
>KOG0281|consensus
Probab=99.88 E-value=1.9e-22 Score=125.29 Aligned_cols=121 Identities=30% Similarity=0.479 Sum_probs=84.0
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccc------------------------------------
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAG------------------------------------ 44 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~------------------------------------ 44 (125)
+++|+.|.+|++||..+++++.++-+|...|..+.|+...+...
T Consensus 250 iisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd 329 (499)
T KOG0281|consen 250 IVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSNGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD 329 (499)
T ss_pred EEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEeCCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc
Confidence 46888888888888888888888777777777776643211111
Q ss_pred ---------------------------cCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEE
Q psy14458 45 ---------------------------TRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIR 97 (125)
Q Consensus 45 ---------------------------~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~ 97 (125)
.+|.-.|.|+.+ .+.++++|+.|.+|++||+..|.++..+++|+.-|.|+.
T Consensus 330 ~kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQY--r~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciR 407 (499)
T KOG0281|consen 330 DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIR 407 (499)
T ss_pred cceEEEecCCceEEEEeccceeeehhhhcccccceehhc--cCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhhee
Confidence 133344444443 456777777777777777777777777777777777777
Q ss_pred EccCCCeEEEeecCCeEEEEeCCCCCCC
Q psy14458 98 FSPSAYYLLTGGYDNKLVLTDLQGTMRP 125 (125)
Q Consensus 98 ~~~~~~~~~~~~~d~~i~~~~~~~~~~~ 125 (125)
| |.+-|++|+.||+|++||++++..|
T Consensus 408 F--d~krIVSGaYDGkikvWdl~aaldp 433 (499)
T KOG0281|consen 408 F--DNKRIVSGAYDGKIKVWDLQAALDP 433 (499)
T ss_pred e--cCceeeeccccceEEEEecccccCC
Confidence 7 6667778888888888887776654
No 21
>KOG0273|consensus
Probab=99.87 E-value=6.1e-21 Score=121.76 Aligned_cols=123 Identities=21% Similarity=0.389 Sum_probs=110.0
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccc----------------------ccccCCCCCeEEEEECC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTT----------------------EAGTRQGSPVSALCVDP 58 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~----------------------~~~~~~~~~i~~~~~~~ 58 (125)
|++++.|+.|+|+-+....+..++.+|.++|.++.|++... ....+|...|..+.|+|
T Consensus 332 F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp 411 (524)
T KOG0273|consen 332 FATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSP 411 (524)
T ss_pred EeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecC
Confidence 57899999999999999999999999999999999985322 12237788999999999
Q ss_pred CCC---------EEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 59 SGR---------LMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 59 ~~~---------~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
++. .+++++.|++|++||+..+.+++.|..|..+|.+++|+|+|+++++|+.||.+.+|+.+++.
T Consensus 412 ~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~ 485 (524)
T KOG0273|consen 412 TGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGK 485 (524)
T ss_pred CCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccchh
Confidence 653 68999999999999999999999999999999999999999999999999999999988763
No 22
>KOG0266|consensus
Probab=99.86 E-value=1.1e-20 Score=124.89 Aligned_cols=103 Identities=30% Similarity=0.535 Sum_probs=94.2
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
+++|+.|++|++||++++++...+.+|. ..|++++|++++.++++++.|+.|++||+.++
T Consensus 261 i~Sgs~D~tvriWd~~~~~~~~~l~~hs--------------------~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~ 320 (456)
T KOG0266|consen 261 LVSGSDDGTVRIWDVRTGECVRKLKGHS--------------------DGISGLAFSPDGNLLVSASYDGTIRVWDLETG 320 (456)
T ss_pred EEEecCCCcEEEEeccCCeEEEeeeccC--------------------CceEEEEECCCCCEEEEcCCCccEEEEECCCC
Confidence 5799999999999999999999999998 78899999999999999999999999999999
Q ss_pred c--eeEEeCCCCCc--eeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 81 R--PLQTFKPHTAD--VRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 81 ~--~~~~~~~~~~~--v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
. +...+..+... ++++.|+|++.++++++.|+.+++||++.+.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~ 367 (456)
T KOG0266|consen 321 SKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGK 367 (456)
T ss_pred ceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCc
Confidence 8 55666666555 8999999999999999999999999998764
No 23
>KOG0269|consensus
Probab=99.86 E-value=2.4e-21 Score=129.52 Aligned_cols=102 Identities=24% Similarity=0.484 Sum_probs=92.0
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCC-CCEEEEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPS-GRLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~i~~~d~~~ 79 (125)
|++|++||.|++||++..+....+.+.. ..|..+.|+|. +..|+++.+.|.+.+||++.
T Consensus 149 liSGSQDg~vK~~DlR~~~S~~t~~~nS--------------------ESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRq 208 (839)
T KOG0269|consen 149 LISGSQDGTVKCWDLRSKKSKSTFRSNS--------------------ESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQ 208 (839)
T ss_pred EEecCCCceEEEEeeecccccccccccc--------------------hhhhceeeccCCCceEEEecCCceEEEeeccC
Confidence 5899999999999999998888888766 78889999995 68899999999999999987
Q ss_pred C-ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 80 S-RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 80 ~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
. ++...+.+|.++|.|+.|+|++.+|++|+.|+.|++||+.+.
T Consensus 209 p~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~ 252 (839)
T KOG0269|consen 209 PDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDS 252 (839)
T ss_pred chhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCC
Confidence 4 567778899999999999999999999999999999999753
No 24
>PTZ00420 coronin; Provisional
Probab=99.86 E-value=5.6e-20 Score=123.14 Aligned_cols=102 Identities=18% Similarity=0.229 Sum_probs=85.3
Q ss_pred CeeecCCCeEEEEECCCCcc--------eeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCE-EEEEeCCCc
Q psy14458 1 MVSGHEDSSCVLYDIRGSRP--------LQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRL-MVSGHEDSS 71 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~--------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~ 71 (125)
|++|+.|++|++||+.++.. +..+.+| ...|.+++|+|++.. +++++.|+.
T Consensus 90 LASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH--------------------~~~V~sVaf~P~g~~iLaSgS~Dgt 149 (568)
T PTZ00420 90 LASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGH--------------------KKKISIIDWNPMNYYIMCSSGFDSF 149 (568)
T ss_pred EEEEeCCCeEEEEECCCCCccccccccceEEeecC--------------------CCcEEEEEECCCCCeEEEEEeCCCe
Confidence 58999999999999976421 1223333 378999999998865 578999999
Q ss_pred EEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 72 CVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 72 i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
|++||+++++....+. |...|.+++|+|+|.++++++.|+.|++||++++.
T Consensus 150 IrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~ 200 (568)
T PTZ00420 150 VNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQE 200 (568)
T ss_pred EEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCc
Confidence 9999999998777776 66789999999999999999999999999998764
No 25
>KOG0284|consensus
Probab=99.86 E-value=3.3e-21 Score=121.23 Aligned_cols=123 Identities=18% Similarity=0.318 Sum_probs=105.6
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccc----------------------cCCCCCeEEEEECC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAG----------------------TRQGSPVSALCVDP 58 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----------------------~~~~~~i~~~~~~~ 58 (125)
|++|+..|...+|+..+-.-...++.|..+|+++.|........ ..+...|++++|+|
T Consensus 111 Lltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnnVk~~~ahh~eaIRdlafSp 190 (464)
T KOG0284|consen 111 LLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNNVKIIQAHHAEAIRDLAFSP 190 (464)
T ss_pred eEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhhhHHhhHhhhhhhheeccCC
Confidence 68999999999999855444445678999999999965332222 14458999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
++..|+++++||+|+|||....+....+.+|.-.|.+++|+|...++++++.|..|++||.+++.
T Consensus 191 nDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~ 255 (464)
T KOG0284|consen 191 NDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGS 255 (464)
T ss_pred CCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcc
Confidence 99999999999999999999888888889999999999999999999999999999999999875
No 26
>KOG0295|consensus
Probab=99.85 E-value=2.2e-20 Score=116.08 Aligned_cols=100 Identities=23% Similarity=0.413 Sum_probs=95.4
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
+.++++|++|++||+.++.++.++.+|. ..|..++|+|.|++++++.+|+++++||++++
T Consensus 307 l~s~SrDktIk~wdv~tg~cL~tL~ghd--------------------nwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~ 366 (406)
T KOG0295|consen 307 LGSGSRDKTIKIWDVSTGMCLFTLVGHD--------------------NWVRGVAFSPGGKYILSCADDKTLRVWDLKNL 366 (406)
T ss_pred EEeecccceEEEEeccCCeEEEEEeccc--------------------ceeeeeEEcCCCeEEEEEecCCcEEEEEeccc
Confidence 4689999999999999999999999998 89999999999999999999999999999999
Q ss_pred ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 81 RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
++...+.+|..-|+++.|+-+..++++|+-|.++++|..+
T Consensus 367 ~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwEcr 406 (406)
T KOG0295|consen 367 QCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 406 (406)
T ss_pred eeeeccCCCcceeEEEecCCCCceEEeccccceeeeeecC
Confidence 9999999999999999999988999999999999999754
No 27
>KOG0275|consensus
Probab=99.85 E-value=1.1e-21 Score=121.24 Aligned_cols=102 Identities=19% Similarity=0.331 Sum_probs=97.0
Q ss_pred CeeecCCCeEEEEECCCCcceeeec-CCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFK-PHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 79 (125)
|++|+.||+|++|-+.+|.|+..|. .|. ..|+|+.|+.++..+.+++.|.++++.-++.
T Consensus 278 lAsGsqDGkIKvWri~tG~ClRrFdrAHt--------------------kGvt~l~FSrD~SqiLS~sfD~tvRiHGlKS 337 (508)
T KOG0275|consen 278 LASGSQDGKIKVWRIETGQCLRRFDRAHT--------------------KGVTCLSFSRDNSQILSASFDQTVRIHGLKS 337 (508)
T ss_pred hhccCcCCcEEEEEEecchHHHHhhhhhc--------------------cCeeEEEEccCcchhhcccccceEEEecccc
Confidence 5899999999999999999999887 566 8999999999999999999999999999999
Q ss_pred CceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 80 SRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 80 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
++++..|++|...|+...|.+||.++++++.||++++|+..+.
T Consensus 338 GK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~Ktt 380 (508)
T KOG0275|consen 338 GKCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHGKTT 380 (508)
T ss_pred chhHHHhcCccccccceEEcCCCCeEEEecCCccEEEecCcch
Confidence 9999999999999999999999999999999999999998765
No 28
>KOG0316|consensus
Probab=99.85 E-value=2.3e-20 Score=110.74 Aligned_cols=102 Identities=18% Similarity=0.317 Sum_probs=96.8
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCc
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSR 81 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 81 (125)
++++.|.+|++||...+.++.++.+|. ..|..++.+.+...+++++.|..+.+||+.+++
T Consensus 33 ltcGsdrtvrLWNp~rg~liktYsghG--------------------~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGk 92 (307)
T KOG0316|consen 33 LTCGSDRTVRLWNPLRGALIKTYSGHG--------------------HEVLDAALSSDNSKFASCGGDKAVQVWDVNTGK 92 (307)
T ss_pred EEcCCCceEEeecccccceeeeecCCC--------------------ceeeeccccccccccccCCCCceEEEEEcccCe
Confidence 689999999999999999999999998 677888999999999999999999999999999
Q ss_pred eeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 82 PLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 82 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
..+.|++|.+.|+.++|+.+...+++|+.|.++++||.++..
T Consensus 93 v~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s 134 (307)
T KOG0316|consen 93 VDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRS 134 (307)
T ss_pred eeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCC
Confidence 999999999999999999999999999999999999998764
No 29
>KOG0319|consensus
Probab=99.85 E-value=2e-20 Score=124.53 Aligned_cols=103 Identities=21% Similarity=0.351 Sum_probs=98.6
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
++|||.|.+.++|++.......++.+|. ..+.|+.|+|....+++++.|++|+||.+.+.
T Consensus 478 iAT~SqDktaKiW~le~~~l~~vLsGH~--------------------RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~f 537 (775)
T KOG0319|consen 478 IATGSQDKTAKIWDLEQLRLLGVLSGHT--------------------RGVWCVSFSKNDQLLATCSGDKTVKIWSISTF 537 (775)
T ss_pred EEecccccceeeecccCceEEEEeeCCc--------------------cceEEEEeccccceeEeccCCceEEEEEeccc
Confidence 5899999999999999888899999999 78899999999999999999999999999999
Q ss_pred ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 81 RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.++.+|.+|...|....|-.+++.+++++.||-+++|++.++.
T Consensus 538 SClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~e 580 (775)
T KOG0319|consen 538 SCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNE 580 (775)
T ss_pred eeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchh
Confidence 9999999999999999999999999999999999999998764
No 30
>KOG0279|consensus
Probab=99.85 E-value=3.8e-20 Score=111.71 Aligned_cols=101 Identities=27% Similarity=0.464 Sum_probs=90.5
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
|+++++|++|++||+++.+....+.+|. ..++.+++||+|.+.++|+.||.+.+||++.+
T Consensus 165 Ivs~s~DktvKvWnl~~~~l~~~~~gh~--------------------~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~ 224 (315)
T KOG0279|consen 165 IVSASWDKTVKVWNLRNCQLRTTFIGHS--------------------GYVNTVTVSPDGSLCASGGKDGEAMLWDLNEG 224 (315)
T ss_pred EEEccCCceEEEEccCCcchhhcccccc--------------------ccEEEEEECCCCCEEecCCCCceEEEEEccCC
Confidence 5789999999999999999988888888 78999999999999999999999999999999
Q ss_pred ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 81 RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+.+..+. |...|++++|+|+.-+|+.+.. ..|++||+.++.
T Consensus 225 k~lysl~-a~~~v~sl~fspnrywL~~at~-~sIkIwdl~~~~ 265 (315)
T KOG0279|consen 225 KNLYSLE-AFDIVNSLCFSPNRYWLCAATA-TSIKIWDLESKA 265 (315)
T ss_pred ceeEecc-CCCeEeeEEecCCceeEeeccC-CceEEEeccchh
Confidence 9998887 8899999999999776666654 449999998753
No 31
>KOG0292|consensus
Probab=99.84 E-value=2.4e-20 Score=126.83 Aligned_cols=122 Identities=14% Similarity=0.247 Sum_probs=110.9
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccc----------------------cCCCCCeEEEEECC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAG----------------------TRQGSPVSALCVDP 58 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----------------------~~~~~~i~~~~~~~ 58 (125)
++++--.|.|.+||.+.+.++..|..|.+||+.+.|++.+.... .+|-+-|..+.|++
T Consensus 24 ILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHh 103 (1202)
T KOG0292|consen 24 ILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHH 103 (1202)
T ss_pred EEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhhccccceeEEeeccC
Confidence 46778889999999999999999999999999999987443222 36678899999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
....++++++|.+|+||+..+++++..+.+|+..|.|.+|+|....++++|.|.+|++||+.+.
T Consensus 104 eyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGL 167 (1202)
T KOG0292|consen 104 EYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGL 167 (1202)
T ss_pred CCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecch
Confidence 9999999999999999999999999999999999999999999999999999999999998653
No 32
>KOG0276|consensus
Probab=99.84 E-value=6.6e-20 Score=120.79 Aligned_cols=123 Identities=19% Similarity=0.319 Sum_probs=110.0
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccc-----------------------cCCCCCeEEEEEC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAG-----------------------TRQGSPVSALCVD 57 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-----------------------~~~~~~i~~~~~~ 57 (125)
+++|+.|..|+||+..++..+..|..|..=|+++..++...... ..|..-|.+++|.
T Consensus 70 iv~GsDD~~IrVfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fn 149 (794)
T KOG0276|consen 70 IVTGSDDMQIRVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFN 149 (794)
T ss_pred EEEecCCceEEEEecccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEec
Confidence 47999999999999999999999999999999999887543332 2677889999999
Q ss_pred CCC-CEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEcc--CCCeEEEeecCCeEEEEeCCCCC
Q psy14458 58 PSG-RLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSP--SAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 58 ~~~-~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
|.+ +.+++++-|++|++|++-...+-+++++|...|+|+.|-+ |..++++|+.|.++++||.++..
T Consensus 150 PkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~ 218 (794)
T KOG0276|consen 150 PKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKS 218 (794)
T ss_pred CCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHH
Confidence 965 8999999999999999999999999999999999999988 45799999999999999998753
No 33
>KOG0645|consensus
Probab=99.84 E-value=2.7e-19 Score=107.71 Aligned_cols=120 Identities=18% Similarity=0.293 Sum_probs=100.4
Q ss_pred CeeecCCCeEEEEECCCC---cceeeec-CCCCCeEEEEecCcccccc------------------------cCCCCCeE
Q psy14458 1 MVSGHEDSSCVLYDIRGS---RPLQTFK-PHTADVRSIHLDHYTTEAG------------------------TRQGSPVS 52 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~---~~~~~~~-~~~~~i~~~~~~~~~~~~~------------------------~~~~~~i~ 52 (125)
|+||+.|+.|++|+...+ .+...+. +|...|+.++|.+...... -.|...|-
T Consensus 30 lAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK 109 (312)
T KOG0645|consen 30 LASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEFECVATLEGHENEVK 109 (312)
T ss_pred EEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceEEEeecCCCceeEEeeeecccccee
Confidence 689999999999998753 3333343 5889999999966433221 26778999
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEEcCCC---ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 53 ALCVDPSGRLMVSGHEDSSCVLYDIRGS---RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~i~~~d~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
|++|+++|++|++++.|+.|-+|..... ++...+..|...|..+.|+|...+|++++.|.+|++|.-.
T Consensus 110 ~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~ 180 (312)
T KOG0645|consen 110 CVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDE 180 (312)
T ss_pred EEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeec
Confidence 9999999999999999999999998754 4677788999999999999999999999999999999754
No 34
>KOG0313|consensus
Probab=99.84 E-value=3.9e-20 Score=115.53 Aligned_cols=104 Identities=26% Similarity=0.431 Sum_probs=91.7
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
++++++|.+|+.||+.++.....+... ..+.|+..+|...++++|+.|..+++||.+++
T Consensus 274 ~yS~SwDHTIk~WDletg~~~~~~~~~---------------------ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~ 332 (423)
T KOG0313|consen 274 IYSVSWDHTIKVWDLETGGLKSTLTTN---------------------KSLNCISYSPLSKLLASGSSDRHIRLWDPRTG 332 (423)
T ss_pred eEeecccceEEEEEeecccceeeeecC---------------------cceeEeecccccceeeecCCCCceeecCCCCC
Confidence 468999999999999999988777644 58899999999999999999999999999986
Q ss_pred c---eeEEeCCCCCceeEEEEcc-CCCeEEEeecCCeEEEEeCCCCCCC
Q psy14458 81 R---PLQTFKPHTADVRSIRFSP-SAYYLLTGGYDNKLVLTDLQGTMRP 125 (125)
Q Consensus 81 ~---~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~~~ 125 (125)
. ..+.+.+|++.|.++.|+| +..+|++++.|+++++||+|+...|
T Consensus 333 ~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~p 381 (423)
T KOG0313|consen 333 DGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAP 381 (423)
T ss_pred CCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCc
Confidence 3 4556779999999999999 5578899999999999999987644
No 35
>KOG0305|consensus
Probab=99.84 E-value=7.1e-20 Score=119.49 Aligned_cols=123 Identities=23% Similarity=0.385 Sum_probs=108.7
Q ss_pred CeeecCCCeEEEEECCCCcceeeecC-CCCCeEEEEecCcccc---------------------cccCCCCCeEEEEECC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKP-HTADVRSIHLDHYTTE---------------------AGTRQGSPVSALCVDP 58 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~---------------------~~~~~~~~i~~~~~~~ 58 (125)
|+.|..+|.|.|||....+.+..+.+ |...|.++.|+..... ....|...|+.+.|++
T Consensus 232 LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~ 311 (484)
T KOG0305|consen 232 LAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWNSSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSP 311 (484)
T ss_pred EEEeecCCeEEEEehhhccccccccCCcCceeEEEeccCceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECC
Confidence 57899999999999999999999888 8999999999752211 2446889999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEcc-CCCeEEEee--cCCeEEEEeCCCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSP-SAYYLLTGG--YDNKLVLTDLQGTM 123 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~--~d~~i~~~~~~~~~ 123 (125)
++.++++|+.|+.+.|||....++...+..|.+.|.+++|+| ...+||+|+ .|++|++||..++.
T Consensus 312 d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~ 379 (484)
T KOG0305|consen 312 DGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGA 379 (484)
T ss_pred CCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCc
Confidence 999999999999999999988888888999999999999999 778888876 59999999998764
No 36
>KOG0319|consensus
Probab=99.84 E-value=4.8e-20 Score=122.79 Aligned_cols=123 Identities=18% Similarity=0.320 Sum_probs=104.1
Q ss_pred CeeecCCCeEEEEECCCCc----ceeeecCCCCCeEEEEecCcc---------------------------c-----ccc
Q psy14458 1 MVSGHEDSSCVLYDIRGSR----PLQTFKPHTADVRSIHLDHYT---------------------------T-----EAG 44 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~----~~~~~~~~~~~i~~~~~~~~~---------------------------~-----~~~ 44 (125)
|+||+.|+++++|-+..+. ++....+|...|.+++..... + ...
T Consensus 380 lat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~ 459 (775)
T KOG0319|consen 380 LATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTE 459 (775)
T ss_pred EEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHH
Confidence 5899999999999774432 345567888888888763210 0 112
Q ss_pred cCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 45 TRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 45 ~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
..|.+.|+|++++|+..++++|+.|.+.++|++........+.+|+..|.++.|+|..+.++++|+|.+|++|.+++..
T Consensus 460 ~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fS 538 (775)
T KOG0319|consen 460 RAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFS 538 (775)
T ss_pred HhhcccccceEecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccce
Confidence 3677899999999999999999999999999999889999999999999999999999999999999999999998753
No 37
>KOG0273|consensus
Probab=99.83 E-value=1.5e-19 Score=115.52 Aligned_cols=119 Identities=15% Similarity=0.343 Sum_probs=106.8
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcc-------------------------------cccccCCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYT-------------------------------TEAGTRQGS 49 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~-------------------------------~~~~~~~~~ 49 (125)
|++++.|+++++|+.....+...++.|..+|+.+.|.+.. +.....|..
T Consensus 374 LaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~ 453 (524)
T KOG0273|consen 374 LASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQE 453 (524)
T ss_pred EEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCC
Confidence 6899999999999998888889999999999999986522 223347889
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 50 PVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 50 ~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
+|.+++|+|+++++++|+.||.|.+|+.++++.+++.. ..+.|..++|+.+|..+..+-.|+.+++.|++
T Consensus 454 pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~-~~~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr 523 (524)
T KOG0273|consen 454 PVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQ-GTGGIFELCWNAAGDKLGACASDGSVCVLDLR 523 (524)
T ss_pred ceEEEEecCCCcEEEecCCCCeeEeccccchheeEeec-CCCeEEEEEEcCCCCEEEEEecCCCceEEEec
Confidence 99999999999999999999999999999999999888 56679999999999999999999999999986
No 38
>KOG0276|consensus
Probab=99.83 E-value=2.7e-20 Score=122.55 Aligned_cols=102 Identities=20% Similarity=0.327 Sum_probs=95.6
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCC--CEEEEEeCCCcEEEEEcC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSG--RLMVSGHEDSSCVLYDIR 78 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~i~~~d~~ 78 (125)
|++++-|++|+||.+.+..+..++.+|. ..|+|+++-+.+ +++++|++|.++++||..
T Consensus 156 FaS~sLDrTVKVWslgs~~~nfTl~gHe--------------------kGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQ 215 (794)
T KOG0276|consen 156 FASASLDRTVKVWSLGSPHPNFTLEGHE--------------------KGVNCVDYYTGGDKPYLISGADDLTIKVWDYQ 215 (794)
T ss_pred eeeeeccccEEEEEcCCCCCceeeeccc--------------------cCcceEEeccCCCcceEEecCCCceEEEeecc
Confidence 6899999999999999999999999998 888999998855 799999999999999999
Q ss_pred CCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 79 GSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 79 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+..++.++++|.+.|+.+.|+|.-.++++|++||++++|+-.+-
T Consensus 216 tk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty 259 (794)
T KOG0276|consen 216 TKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTY 259 (794)
T ss_pred hHHHHHHhhcccccceEEEecCCCcEEEEecCCccEEEecCcce
Confidence 99999999999999999999999999999999999999987653
No 39
>PTZ00421 coronin; Provisional
Probab=99.83 E-value=3.8e-19 Score=118.10 Aligned_cols=104 Identities=15% Similarity=0.286 Sum_probs=89.1
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
|++++.|+.|++||+.+++....+..|. ..|.+++|+|++.++++++.|+.|++||++++
T Consensus 141 LaSgs~DgtVrIWDl~tg~~~~~l~~h~--------------------~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg 200 (493)
T PTZ00421 141 LASAGADMVVNVWDVERGKAVEVIKCHS--------------------DQITSLEWNLDGSLLCTTSKDKKLNIIDPRDG 200 (493)
T ss_pred EEEEeCCCEEEEEECCCCeEEEEEcCCC--------------------CceEEEEEECCCCEEEEecCCCEEEEEECCCC
Confidence 5789999999999999988888887777 78899999999999999999999999999999
Q ss_pred ceeEEeCCCCCc-eeEEEEccCCCeEEEee----cCCeEEEEeCCCCCC
Q psy14458 81 RPLQTFKPHTAD-VRSIRFSPSAYYLLTGG----YDNKLVLTDLQGTMR 124 (125)
Q Consensus 81 ~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~----~d~~i~~~~~~~~~~ 124 (125)
+.+..+..|.+. +..+.|.+++..+++++ .|+.|++||+++...
T Consensus 201 ~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~ 249 (493)
T PTZ00421 201 TIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMAS 249 (493)
T ss_pred cEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCC
Confidence 988888888764 44678888877776654 489999999987543
No 40
>KOG0277|consensus
Probab=99.83 E-value=1.5e-19 Score=108.12 Aligned_cols=105 Identities=24% Similarity=0.377 Sum_probs=92.9
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCC-CCEEEEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPS-GRLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~i~~~d~~~ 79 (125)
++++++|++|++|+...++.+.+|.+|. .-|...+|+|. .+++++++.|+++++||++.
T Consensus 120 ~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~--------------------~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~ 179 (311)
T KOG0277|consen 120 FLTSSWDGTIKLWDPNRPNSVQTFNGHN--------------------SCIYQAAFSPHIPNLFASASGDGTLRLWDVRS 179 (311)
T ss_pred EEeeccCCceEeecCCCCcceEeecCCc--------------------cEEEEEecCCCCCCeEEEccCCceEEEEEecC
Confidence 4688999999999999899999999988 77888899995 68999999999999999987
Q ss_pred CceeEEeCCCCCceeEEEEcc-CCCeEEEeecCCeEEEEeCCCCCCC
Q psy14458 80 SRPLQTFKPHTADVRSIRFSP-SAYYLLTGGYDNKLVLTDLQGTMRP 125 (125)
Q Consensus 80 ~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~~~ 125 (125)
.-....+..|..++.+..|+. +...+++|+.|+.|+.||+++...|
T Consensus 180 ~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~p 226 (311)
T KOG0277|consen 180 PGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTP 226 (311)
T ss_pred CCceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhcccc
Confidence 544444889999999999988 8889999999999999999987654
No 41
>KOG0264|consensus
Probab=99.83 E-value=2e-19 Score=113.96 Aligned_cols=101 Identities=29% Similarity=0.551 Sum_probs=86.5
Q ss_pred CeeecCCCeEEEEECCC--CcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCC-CEEEEEeCCCcEEEEEc
Q psy14458 1 MVSGHEDSSCVLYDIRG--SRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSG-RLMVSGHEDSSCVLYDI 77 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~d~ 77 (125)
|++.+.|+.+.|||+++ .++......|. ..+.|++|+|.+ ..|++|+.|++|.+||+
T Consensus 243 F~sv~dd~~L~iwD~R~~~~~~~~~~~ah~--------------------~~vn~~~fnp~~~~ilAT~S~D~tV~LwDl 302 (422)
T KOG0264|consen 243 FGSVGDDGKLMIWDTRSNTSKPSHSVKAHS--------------------AEVNCVAFNPFNEFILATGSADKTVALWDL 302 (422)
T ss_pred heeecCCCeEEEEEcCCCCCCCcccccccC--------------------CceeEEEeCCCCCceEEeccCCCcEEEeec
Confidence 57899999999999995 44455555666 788899999965 67899999999999999
Q ss_pred CCC-ceeEEeCCCCCceeEEEEccC-CCeEEEeecCCeEEEEeCCC
Q psy14458 78 RGS-RPLQTFKPHTADVRSIRFSPS-AYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 78 ~~~-~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~i~~~~~~~ 121 (125)
|+. +++.++..|+..|.++.|+|+ ...+++++.|+.+.+||+..
T Consensus 303 RnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ 348 (422)
T KOG0264|consen 303 RNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSR 348 (422)
T ss_pred hhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccc
Confidence 984 688899999999999999995 56888899999999999864
No 42
>KOG0289|consensus
Probab=99.83 E-value=2.4e-19 Score=113.81 Aligned_cols=121 Identities=21% Similarity=0.350 Sum_probs=104.2
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccc----------------------cC--CCCCeEEEEEC
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAG----------------------TR--QGSPVSALCVD 57 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----------------------~~--~~~~i~~~~~~ 57 (125)
++++.|..|+||.............|..+|+.+..++...... .. ..-.+++.+|+
T Consensus 277 ~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fH 356 (506)
T KOG0289|consen 277 ITASADEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFH 356 (506)
T ss_pred eecCCcceEEeeccccccCccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEc
Confidence 6789999999999987777777788999999888765322211 11 12348999999
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 58 PSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 58 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
|+|..|++|..|+.+++||+..+..+..|.+|.++|..++|+.+|-++++++.|+.|++||+|..
T Consensus 357 pDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl 421 (506)
T KOG0289|consen 357 PDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKL 421 (506)
T ss_pred CCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhh
Confidence 99999999999999999999999999999999999999999999999999999999999999864
No 43
>KOG0274|consensus
Probab=99.83 E-value=3.9e-19 Score=118.66 Aligned_cols=119 Identities=26% Similarity=0.413 Sum_probs=105.1
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccccc-------------------c-cCCCCCeEEEEECCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEA-------------------G-TRQGSPVSALCVDPSG 60 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-------------------~-~~~~~~i~~~~~~~~~ 60 (125)
|++|+.|.++++||..++.+...+.+|...++++...+..... . .+|..+|.++..+ +
T Consensus 264 lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~ 341 (537)
T KOG0274|consen 264 LVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTIDPFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--E 341 (537)
T ss_pred EEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEccCceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--C
Confidence 5789999999999999999999999999999888865432222 1 2488999999997 8
Q ss_pred CEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 61 RLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 61 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
.++++|+.|++|++||+.+++++.++.+|..+|.++.+.+. ..+++|+.|++|++||+++.
T Consensus 342 ~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~ 402 (537)
T KOG0274|consen 342 PLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTK 402 (537)
T ss_pred CEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCch
Confidence 89999999999999999999999999999999999988554 89999999999999999876
No 44
>KOG1407|consensus
Probab=99.82 E-value=4.2e-19 Score=106.55 Aligned_cols=79 Identities=20% Similarity=0.289 Sum_probs=73.8
Q ss_pred CCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCCC
Q psy14458 46 RQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTMR 124 (125)
Q Consensus 46 ~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~ 124 (125)
+|+....||.|+|+|+++++|+.|..+.+||+...-+++.+..+.-+|+.++|+.||++|+++|+|-.|-|=+++++.+
T Consensus 187 AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~ 265 (313)
T KOG1407|consen 187 AHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDR 265 (313)
T ss_pred cCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeeccCccceEEeEecccCCe
Confidence 6778889999999999999999999999999999889999999999999999999999999999999999988887753
No 45
>KOG0318|consensus
Probab=99.82 E-value=5e-19 Score=114.55 Aligned_cols=102 Identities=17% Similarity=0.354 Sum_probs=91.1
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
++||++|+.|-+|+-...+-...++.|. ..|.|+.++|+|+++++.+.||.+.+||-.++
T Consensus 163 i~T~sdDn~v~ffeGPPFKFk~s~r~Hs--------------------kFV~~VRysPDG~~Fat~gsDgki~iyDGktg 222 (603)
T KOG0318|consen 163 IATGSDDNTVAFFEGPPFKFKSSFREHS--------------------KFVNCVRYSPDGSRFATAGSDGKIYIYDGKTG 222 (603)
T ss_pred EEeccCCCeEEEeeCCCeeeeecccccc--------------------cceeeEEECCCCCeEEEecCCccEEEEcCCCc
Confidence 4788889988888855545555566666 88999999999999999999999999999999
Q ss_pred ceeEEeC---CCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 81 RPLQTFK---PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 81 ~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+.+..+. +|++.|.+++|+||+..+++++.|.++++||+.+.
T Consensus 223 e~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~ 267 (603)
T KOG0318|consen 223 EKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTN 267 (603)
T ss_pred cEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeecc
Confidence 9999998 89999999999999999999999999999999765
No 46
>KOG0282|consensus
Probab=99.81 E-value=8.3e-20 Score=116.81 Aligned_cols=101 Identities=27% Similarity=0.420 Sum_probs=93.0
Q ss_pred CeeecCCCeEEEEECCC-CcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRG-SRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 79 (125)
|++++.|+.|++|++.. ++++.+|.+|. .+|..++|++++..+++++-|+.+++||+.+
T Consensus 230 lLS~gmD~~vklW~vy~~~~~lrtf~gH~--------------------k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtET 289 (503)
T KOG0282|consen 230 LLSGGMDGLVKLWNVYDDRRCLRTFKGHR--------------------KPVRDASFNNCGTSFLSASFDRFLKLWDTET 289 (503)
T ss_pred EEecCCCceEEEEEEecCcceehhhhcch--------------------hhhhhhhccccCCeeeeeecceeeeeecccc
Confidence 58999999999999976 78899999998 7888999999999999999999999999999
Q ss_pred CceeEEeCCCCCceeEEEEccCC-CeEEEeecCCeEEEEeCCCC
Q psy14458 80 SRPLQTFKPHTADVRSIRFSPSA-YYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 80 ~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~ 122 (125)
|+++..|. ....+.|+.|+|++ +.+++|+.|+.|+.||+|++
T Consensus 290 G~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~ 332 (503)
T KOG0282|consen 290 GQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSG 332 (503)
T ss_pred ceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccch
Confidence 99999997 55678899999987 88899999999999999986
No 47
>KOG0316|consensus
Probab=99.81 E-value=5.8e-19 Score=104.85 Aligned_cols=122 Identities=19% Similarity=0.309 Sum_probs=103.1
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccc------------------------------------
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAG------------------------------------ 44 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~------------------------------------ 44 (125)
|++|+.|..+.+||+.+|+....+.+|..+|+.+.|+.......
T Consensus 74 f~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v 153 (307)
T KOG0316|consen 74 FASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDV 153 (307)
T ss_pred cccCCCCceEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEe
Confidence 57899999999999999999999999999999999864111100
Q ss_pred --------------------------cCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCcee--EE
Q psy14458 45 --------------------------TRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVR--SI 96 (125)
Q Consensus 45 --------------------------~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~--~~ 96 (125)
..-+.+|+|++++++++..+.++.++++++.|-.+++.+.++++|++.=. ..
T Consensus 154 ~~heIvaGS~DGtvRtydiR~G~l~sDy~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc 233 (307)
T KOG0316|consen 154 AEHEIVAGSVDGTVRTYDIRKGTLSSDYFGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDC 233 (307)
T ss_pred cccEEEeeccCCcEEEEEeecceeehhhcCCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeee
Confidence 12347999999999999999999999999999999999999999987543 34
Q ss_pred EEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 97 RFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 97 ~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+++....++++|++||.+++||+...
T Consensus 234 ~l~qsdthV~sgSEDG~Vy~wdLvd~ 259 (307)
T KOG0316|consen 234 CLNQSDTHVFSGSEDGKVYFWDLVDE 259 (307)
T ss_pred eecccceeEEeccCCceEEEEEeccc
Confidence 66777789999999999999998654
No 48
>KOG0772|consensus
Probab=99.81 E-value=1.6e-19 Score=116.74 Aligned_cols=110 Identities=26% Similarity=0.461 Sum_probs=87.5
Q ss_pred CeeecCCCeEEEEECCCC-cceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRGS-RPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 79 (125)
|+|+++|+++++||+... +++++|+..... ...-+++.++|+|+++.++.|+.||.|.+|+...
T Consensus 284 FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~---------------g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~ 348 (641)
T KOG0772|consen 284 FLTCSYDGTLRIWDVNNTKSQLQVIKTKPAG---------------GKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGS 348 (641)
T ss_pred eEEecCCCcEEEEecCCchhheeEEeeccCC---------------CcccCceeeecCCCcchhhhcccCCceeeeecCC
Confidence 689999999999999764 345566532210 0114678999999999999999999999999754
Q ss_pred C---ceeEEeCCCCC--ceeEEEEccCCCeEEEeecCCeEEEEeCCCCCCC
Q psy14458 80 S---RPLQTFKPHTA--DVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTMRP 125 (125)
Q Consensus 80 ~---~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~ 125 (125)
. .....-.+|.. .++|+.|++||++|++-+.|+++++||++...+|
T Consensus 349 ~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkp 399 (641)
T KOG0772|consen 349 RTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKP 399 (641)
T ss_pred cccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccc
Confidence 2 23444457877 8999999999999999999999999999987665
No 49
>KOG0305|consensus
Probab=99.81 E-value=1.7e-18 Score=113.17 Aligned_cols=122 Identities=23% Similarity=0.324 Sum_probs=106.6
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccc------------------------cCCCCCeEEEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAG------------------------TRQGSPVSALCV 56 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~------------------------~~~~~~i~~~~~ 56 (125)
||+|++|+.+.|||.....+...+..|...|.++.|.+.....+ ...+..|+.+.|
T Consensus 316 lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgsQVcsL~W 395 (484)
T KOG0305|consen 316 LASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTGSQVCSLIW 395 (484)
T ss_pred eccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccCCceeeEEE
Confidence 68999999999999988888899999999999999987442222 245689999999
Q ss_pred CCCCCEEEE--EeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 57 DPSGRLMVS--GHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 57 ~~~~~~~~~--~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
++..+.+++ |..++.|.||+..+.+.+..+.+|...|.+++++|||..+++|+.|.++++|++-..
T Consensus 396 sk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 396 SKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLFDE 463 (484)
T ss_pred cCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCCEEEEecccCcEEeccccCC
Confidence 999876665 456778999999999999999999999999999999999999999999999998653
No 50
>KOG0264|consensus
Probab=99.81 E-value=3.4e-19 Score=112.96 Aligned_cols=105 Identities=30% Similarity=0.532 Sum_probs=88.0
Q ss_pred CeeecCCCeEEEEECCCCcc-------eeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCC-CCEEEEEeCCCcE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRP-------LQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPS-GRLMVSGHEDSSC 72 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~-------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~i 72 (125)
|++++.|+.|++||+..... ...+.+|. ..|..++|++. ..+|++.+.|+.+
T Consensus 193 Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~--------------------~~VeDV~~h~~h~~lF~sv~dd~~L 252 (422)
T KOG0264|consen 193 LLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHE--------------------DVVEDVAWHPLHEDLFGSVGDDGKL 252 (422)
T ss_pred EeeccCCCcEEEEeccccccCCccccceEEeecCC--------------------cceehhhccccchhhheeecCCCeE
Confidence 58999999999999975432 23345555 78899999995 4788999999999
Q ss_pred EEEEcC--CCceeEEeCCCCCceeEEEEcc-CCCeEEEeecCCeEEEEeCCCCCCC
Q psy14458 73 VLYDIR--GSRPLQTFKPHTADVRSIRFSP-SAYYLLTGGYDNKLVLTDLQGTMRP 125 (125)
Q Consensus 73 ~~~d~~--~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~~~ 125 (125)
.|||+| +.+......+|.++|+|++|+| ++.+||+|+.|+++.+||+|+..+|
T Consensus 253 ~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~ 308 (422)
T KOG0264|consen 253 MIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKP 308 (422)
T ss_pred EEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccC
Confidence 999999 5666777789999999999999 7788899999999999999987653
No 51
>KOG0281|consensus
Probab=99.81 E-value=2.2e-19 Score=111.82 Aligned_cols=118 Identities=19% Similarity=0.356 Sum_probs=96.2
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccccccc--------------------CCC------------
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGT--------------------RQG------------ 48 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--------------------~~~------------ 48 (125)
+++|..|++|+|||..+..+...+.+|++.|.++.++...+.... .|.
T Consensus 210 iVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~ng~ 289 (499)
T KOG0281|consen 210 IVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYDERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSNGY 289 (499)
T ss_pred hhcccccCceEEeccccHHHHHhhhcCCCcEEeeeccceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEeCCE
Confidence 478999999999999999999999999999999998754333322 121
Q ss_pred -------------------------------CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEE
Q psy14458 49 -------------------------------SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIR 97 (125)
Q Consensus 49 -------------------------------~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~ 97 (125)
..|+.+.|+ .+++++++.|.+|++|+..+.+.+..+.+|+..+-|+.
T Consensus 290 mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQ 367 (499)
T KOG0281|consen 290 MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ 367 (499)
T ss_pred EEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceEEEEeccceeeehhhhcccccceehh
Confidence 244555553 45889999999999999999999999999999998888
Q ss_pred EccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 98 FSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 98 ~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+ .++++++|+.|.+|++||...+
T Consensus 368 Y--r~rlvVSGSSDntIRlwdi~~G 390 (499)
T KOG0281|consen 368 Y--RDRLVVSGSSDNTIRLWDIECG 390 (499)
T ss_pred c--cCeEEEecCCCceEEEEecccc
Confidence 8 8889999999999999998765
No 52
>KOG0267|consensus
Probab=99.81 E-value=6.2e-20 Score=122.25 Aligned_cols=121 Identities=23% Similarity=0.454 Sum_probs=109.2
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccc----------------------cCCCCCeEEEEECC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAG----------------------TRQGSPVSALCVDP 58 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----------------------~~~~~~i~~~~~~~ 58 (125)
|++|+.+|+|++||+...+.+.++.+|..++..+.|+++....+ ..|...+.++.|+|
T Consensus 85 laagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP 164 (825)
T KOG0267|consen 85 LAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSP 164 (825)
T ss_pred hcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcceeEEEeecC
Confidence 57899999999999999999999999999999999987554442 13455688999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
+|.+++.|++|..+++||...++....|..|...+..+.|+|..-++++|+.|+++++||+++
T Consensus 165 ~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dlet 227 (825)
T KOG0267|consen 165 DGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLET 227 (825)
T ss_pred CCceeeccCCcceeeeecccccccccccccccccccccccCchhhhhccCCCCceeeeeccce
Confidence 999999999999999999999999999999999999999999999999999999999999984
No 53
>KOG0643|consensus
Probab=99.80 E-value=1.9e-18 Score=104.09 Aligned_cols=122 Identities=23% Similarity=0.450 Sum_probs=101.3
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccc----------------------------------ccccC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTT----------------------------------EAGTR 46 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~----------------------------------~~~~~ 46 (125)
++||+.|.++++||+.+|+++..++ ...+++.+.|+.... ....-
T Consensus 67 liTGSAD~t~kLWDv~tGk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t 145 (327)
T KOG0643|consen 67 LITGSADQTAKLWDVETGKQLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPT 145 (327)
T ss_pred eeeccccceeEEEEcCCCcEEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecC
Confidence 5899999999999999999998877 556777777643111 11112
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCc-eeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 47 QGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSR-PLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 47 ~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+.+.++.+.|.|-++++++|.++|.|..||+++++ .+.+-+.|...|+.++++||..+++++|.|.+-++||+++.+
T Consensus 146 ~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~ 223 (327)
T KOG0643|consen 146 PDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLE 223 (327)
T ss_pred CccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeecccee
Confidence 34789999999999999999999999999999975 455557899999999999999999999999999999998753
No 54
>PTZ00420 coronin; Provisional
Probab=99.80 E-value=5e-18 Score=113.93 Aligned_cols=103 Identities=20% Similarity=0.272 Sum_probs=85.2
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
|++++.|+.|++||+++++....+. +. ..|.+++|+|++.++++++.|+.|++||++++
T Consensus 141 LaSgS~DgtIrIWDl~tg~~~~~i~-~~--------------------~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg 199 (568)
T PTZ00420 141 MCSSGFDSFVNIWDIENEKRAFQIN-MP--------------------KKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQ 199 (568)
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEe-cC--------------------CcEEEEEECCCCCEEEEEecCCEEEEEECCCC
Confidence 3689999999999999887665554 33 57899999999999999999999999999999
Q ss_pred ceeEEeCCCCCceeE-----EEEccCCCeEEEeecCC----eEEEEeCCCCCC
Q psy14458 81 RPLQTFKPHTADVRS-----IRFSPSAYYLLTGGYDN----KLVLTDLQGTMR 124 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~-----~~~~~~~~~~~~~~~d~----~i~~~~~~~~~~ 124 (125)
+.+..+.+|.+.+.. ..|++++.++++++.|+ +|++||+++...
T Consensus 200 ~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~ 252 (568)
T PTZ00420 200 EIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTS 252 (568)
T ss_pred cEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCC
Confidence 999889889875433 23568888999988764 799999996543
No 55
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.80 E-value=4.6e-18 Score=118.97 Aligned_cols=102 Identities=24% Similarity=0.357 Sum_probs=89.9
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECC-CCCEEEEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDP-SGRLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~i~~~d~~~ 79 (125)
|++++.|+.|++||+.+++.+..+.+|. ..|.+++|+| ++.++++|+.|+.|++||+++
T Consensus 548 las~~~Dg~v~lWd~~~~~~~~~~~~H~--------------------~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~ 607 (793)
T PLN00181 548 VASSNFEGVVQVWDVARSQLVTEMKEHE--------------------KRVWSIDYSSADPTLLASGSDDGSVKLWSINQ 607 (793)
T ss_pred EEEEeCCCeEEEEECCCCeEEEEecCCC--------------------CCEEEEEEcCCCCCEEEEEcCCCEEEEEECCC
Confidence 5789999999999999988888888887 7889999997 678999999999999999999
Q ss_pred CceeEEeCCCCCceeEEEEcc-CCCeEEEeecCCeEEEEeCCCCC
Q psy14458 80 SRPLQTFKPHTADVRSIRFSP-SAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 80 ~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+..+..+.. ...+.++.|++ ++.++++|+.|+.|++||+++..
T Consensus 608 ~~~~~~~~~-~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~ 651 (793)
T PLN00181 608 GVSIGTIKT-KANICCVQFPSESGRSLAFGSADHKVYYYDLRNPK 651 (793)
T ss_pred CcEEEEEec-CCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 888887774 46788999954 79999999999999999998653
No 56
>KOG0291|consensus
Probab=99.80 E-value=4.9e-18 Score=113.93 Aligned_cols=122 Identities=18% Similarity=0.357 Sum_probs=107.5
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecC-----------------------cccccccCCCCCeEEEEEC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDH-----------------------YTTEAGTRQGSPVSALCVD 57 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~-----------------------~~~~~~~~~~~~i~~~~~~ 57 (125)
|++|-..|...+|++.....+..+.-...+|..+.|+. ..+-..+.|-..+++++++
T Consensus 280 lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YS 359 (893)
T KOG0291|consen 280 LVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYS 359 (893)
T ss_pred EEEEecCCeeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEEC
Confidence 47888889999999998888888887778888888762 1223335777899999999
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 58 PSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 58 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
|+|.++++|++||.|++||...+-++.+|..|...|+.+.|+.+++.+++.|.||+++.||+...
T Consensus 360 pDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRY 424 (893)
T KOG0291|consen 360 PDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRY 424 (893)
T ss_pred CCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeeccc
Confidence 99999999999999999999999999999999999999999999999999999999999998643
No 57
>KOG0270|consensus
Probab=99.80 E-value=5.5e-18 Score=107.65 Aligned_cols=121 Identities=20% Similarity=0.368 Sum_probs=103.9
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccccccc-----------------------CCCCCeEEEEEC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGT-----------------------RQGSPVSALCVD 57 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----------------------~~~~~i~~~~~~ 57 (125)
|++|+.|.+|++||+.++++...+..|..+|.++.|++....... .-...|..++|.
T Consensus 259 LaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~ 338 (463)
T KOG0270|consen 259 LASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKVAWD 338 (463)
T ss_pred EEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEEEEec
Confidence 689999999999999999999999999999999999875432221 112578899999
Q ss_pred CCC-CEEEEEeCCCcEEEEEcCCC-ceeEEeCCCCCceeEEEEccC-CCeEEEeecCCeEEEEeCCC
Q psy14458 58 PSG-RLMVSGHEDSSCVLYDIRGS-RPLQTFKPHTADVRSIRFSPS-AYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 58 ~~~-~~~~~~~~~~~i~~~d~~~~-~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~i~~~~~~~ 121 (125)
|.. ..++++..||+|+-+|.|.. +++.++++|.++|.++++++. ..++++++.|+.+++|++..
T Consensus 339 ~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~ 405 (463)
T KOG0270|consen 339 PHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDV 405 (463)
T ss_pred CCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecC
Confidence 976 56788889999999999985 899999999999999999984 56888999999999999864
No 58
>KOG1446|consensus
Probab=99.79 E-value=1.2e-17 Score=102.24 Aligned_cols=124 Identities=16% Similarity=0.202 Sum_probs=95.0
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEE---------ecCcc----------------cccccCCCCCeEEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIH---------LDHYT----------------TEAGTRQGSPVSALC 55 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~---------~~~~~----------------~~~~~~~~~~i~~~~ 55 (125)
|++++.|++|++||++..++...+.....+|-+.. ..... +..........+.+.
T Consensus 115 FlS~S~D~tvrLWDlR~~~cqg~l~~~~~pi~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~ 194 (311)
T KOG1446|consen 115 FLSSSLDKTVRLWDLRVKKCQGLLNLSGRPIAAFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLE 194 (311)
T ss_pred EEecccCCeEEeeEecCCCCceEEecCCCcceeECCCCcEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeE
Confidence 58999999999999998877666554444443322 22110 011113346789999
Q ss_pred ECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCce---eEEEEccCCCeEEEeecCCeEEEEeCCCCCC
Q psy14458 56 VDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADV---RSIRFSPSAYYLLTGGYDNKLVLTDLQGTMR 124 (125)
Q Consensus 56 ~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v---~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~ 124 (125)
|+|+|++++.++..+.+++.|.-+|.....+..+.+.- ....|.||++++++|+.||+|.+|+++++.+
T Consensus 195 FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~ 266 (311)
T KOG1446|consen 195 FSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETGKK 266 (311)
T ss_pred EcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCCcE
Confidence 99999999999999999999999999888888665432 4678999999999999999999999988753
No 59
>KOG0641|consensus
Probab=99.79 E-value=4.6e-18 Score=100.88 Aligned_cols=110 Identities=51% Similarity=0.857 Sum_probs=95.8
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
|++|++|.+|++||++-..++.++..... ......+.+..+++.|.|.++++|-.|....+||++.+
T Consensus 197 ~~sgsqdktirfwdlrv~~~v~~l~~~~~-------------~~glessavaav~vdpsgrll~sg~~dssc~lydirg~ 263 (350)
T KOG0641|consen 197 FASGSQDKTIRFWDLRVNSCVNTLDNDFH-------------DGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGG 263 (350)
T ss_pred EEccCCCceEEEEeeeccceeeeccCccc-------------CCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCC
Confidence 57999999999999998888877653210 01112267999999999999999999999999999999
Q ss_pred ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 81 RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+.++.+..|...|+|+.|+|...++++++.|..|++-|++...
T Consensus 264 r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdl 306 (350)
T KOG0641|consen 264 RMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDL 306 (350)
T ss_pred ceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccch
Confidence 9999999999999999999999999999999999999998653
No 60
>KOG0265|consensus
Probab=99.79 E-value=2.4e-18 Score=104.94 Aligned_cols=121 Identities=19% Similarity=0.280 Sum_probs=105.5
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecC----------------------cccccccCCCCCeEEEEECC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDH----------------------YTTEAGTRQGSPVSALCVDP 58 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~----------------------~~~~~~~~~~~~i~~~~~~~ 58 (125)
+++++.|.+++.||+++++++..+++|..-++++.... ....++...+.+++++.|..
T Consensus 105 i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d 184 (338)
T KOG0265|consen 105 ILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKD 184 (338)
T ss_pred EEEecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEecc
Confidence 57899999999999999999999998887777665321 11222334567899999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
++..+.+|.-|+.|++||++.......+++|...|+++..+|+|.++.+-+.|.++++||++-
T Consensus 185 ~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp 247 (338)
T KOG0265|consen 185 TSDQVISGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRP 247 (338)
T ss_pred cccceeeccccCceeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecc
Confidence 999999999999999999999999999999999999999999999999999999999999874
No 61
>KOG0283|consensus
Probab=99.79 E-value=9.4e-19 Score=117.61 Aligned_cols=83 Identities=18% Similarity=0.286 Sum_probs=73.5
Q ss_pred CcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEcc-CCCeEEEeecCCeEEE
Q psy14458 38 HYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSP-SAYYLLTGGYDNKLVL 116 (125)
Q Consensus 38 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~i~~ 116 (125)
...+....+|...|.++.||.+ .+|++++.|.+|++|++...+++..|. |...|+|++|+| |.+++++|+-|+.+++
T Consensus 359 ekP~~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvDDryFiSGSLD~KvRi 436 (712)
T KOG0283|consen 359 EKPFCEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVDDRYFISGSLDGKVRL 436 (712)
T ss_pred ccchhhhhccchhheecccccC-CeeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEecccCCCcEeecccccceEE
Confidence 3444445688899999999975 589999999999999999999999998 999999999999 8899999999999999
Q ss_pred EeCCCC
Q psy14458 117 TDLQGT 122 (125)
Q Consensus 117 ~~~~~~ 122 (125)
|++...
T Consensus 437 WsI~d~ 442 (712)
T KOG0283|consen 437 WSISDK 442 (712)
T ss_pred eecCcC
Confidence 998653
No 62
>KOG0302|consensus
Probab=99.79 E-value=4e-18 Score=106.71 Aligned_cols=121 Identities=26% Similarity=0.344 Sum_probs=98.6
Q ss_pred eeecCCCeEEEEECCCC----------------cceeeecCCCCCeEEEEecCcccc-----------------------
Q psy14458 2 VSGHEDSSCVLYDIRGS----------------RPLQTFKPHTADVRSIHLDHYTTE----------------------- 42 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~----------------~~~~~~~~~~~~i~~~~~~~~~~~----------------------- 42 (125)
++-+..|.|.|||+... +++.++.+|...-+.+.|.+....
T Consensus 169 aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~v 248 (440)
T KOG0302|consen 169 ASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKV 248 (440)
T ss_pred eeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccccccCccccceEeeeeccCceee
Confidence 56788899999998642 457778888889999999762111
Q ss_pred ---cccCCCCCeEEEEECCCC-CEEEEEeCCCcEEEEEcCCCc--eeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEE
Q psy14458 43 ---AGTRQGSPVSALCVDPSG-RLMVSGHEDSSCVLYDIRGSR--PLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVL 116 (125)
Q Consensus 43 ---~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~ 116 (125)
-...|+..|..++|||.. .+|++++-||+|+|||++.++ .....++|...|+-|+|+.+-.+|++|+.||++++
T Consensus 249 d~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~i 328 (440)
T KOG0302|consen 249 DQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSI 328 (440)
T ss_pred cCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCCceEEE
Confidence 112577899999999975 789999999999999999872 33344789999999999998789999999999999
Q ss_pred EeCCCC
Q psy14458 117 TDLQGT 122 (125)
Q Consensus 117 ~~~~~~ 122 (125)
||+|.-
T Consensus 329 wDLR~~ 334 (440)
T KOG0302|consen 329 WDLRQF 334 (440)
T ss_pred EEhhhc
Confidence 999864
No 63
>KOG0294|consensus
Probab=99.78 E-value=3.2e-18 Score=105.04 Aligned_cols=103 Identities=24% Similarity=0.396 Sum_probs=92.7
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCC--EEEEEeCCCcEEEEEcC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGR--LMVSGHEDSSCVLYDIR 78 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~i~~~d~~ 78 (125)
+++|+.|.+|+|||++....+..+..|. ..|+++.|.+... .|++|++||.|.+|+..
T Consensus 56 ~aSGssDetI~IYDm~k~~qlg~ll~Ha--------------------gsitaL~F~~~~S~shLlS~sdDG~i~iw~~~ 115 (362)
T KOG0294|consen 56 VASGSSDETIHIYDMRKRKQLGILLSHA--------------------GSITALKFYPPLSKSHLLSGSDDGHIIIWRVG 115 (362)
T ss_pred EeccCCCCcEEEEeccchhhhcceeccc--------------------cceEEEEecCCcchhheeeecCCCcEEEEEcC
Confidence 5899999999999999998888888887 6677777777653 89999999999999999
Q ss_pred CCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 79 GSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 79 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.-+.+..+++|.+.|+.++.+|.+++-++.+.|+.++.||+-.+.
T Consensus 116 ~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr 160 (362)
T KOG0294|consen 116 SWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGR 160 (362)
T ss_pred CeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCc
Confidence 999999999999999999999999999999999999999986553
No 64
>KOG0647|consensus
Probab=99.78 E-value=3.7e-18 Score=104.26 Aligned_cols=102 Identities=22% Similarity=0.435 Sum_probs=84.6
Q ss_pred CeeecCCCeEEEEECCC-Cccee-eecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcC
Q psy14458 1 MVSGHEDSSCVLYDIRG-SRPLQ-TFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIR 78 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~-~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~ 78 (125)
++.|++|++||+|++.. +.... ....+. .++.+++|+.++..+++|+.|+.+++||+.
T Consensus 43 ~~A~SWD~tVR~wevq~~g~~~~ka~~~~~--------------------~PvL~v~WsddgskVf~g~~Dk~~k~wDL~ 102 (347)
T KOG0647|consen 43 LAAGSWDGTVRIWEVQNSGQLVPKAQQSHD--------------------GPVLDVCWSDDGSKVFSGGCDKQAKLWDLA 102 (347)
T ss_pred EEecccCCceEEEEEecCCcccchhhhccC--------------------CCeEEEEEccCCceEEeeccCCceEEEEcc
Confidence 35899999999999976 33332 223344 788999999999999999999999999999
Q ss_pred CCceeEEeCCCCCceeEEEEccCC--CeEEEeecCCeEEEEeCCCCC
Q psy14458 79 GSRPLQTFKPHTADVRSIRFSPSA--YYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 79 ~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+++.. .+..|.++|.++.|-+.. ..|++||=|++|++||+|...
T Consensus 103 S~Q~~-~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~ 148 (347)
T KOG0647|consen 103 SGQVS-QVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSN 148 (347)
T ss_pred CCCee-eeeecccceeEEEEecCCCcceeEecccccceeecccCCCC
Confidence 99644 466799999999998855 489999999999999998653
No 65
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.78 E-value=4.8e-17 Score=100.21 Aligned_cols=122 Identities=26% Similarity=0.397 Sum_probs=103.3
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccccc----------------------ccCCCCCeEEEEECC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEA----------------------GTRQGSPVSALCVDP 58 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----------------------~~~~~~~i~~~~~~~ 58 (125)
|++++.|+.|++||+..++....+..+...+.++.|.+..... ...+...+.+++++|
T Consensus 66 l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 145 (289)
T cd00200 66 LASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSP 145 (289)
T ss_pred EEEEcCCCeEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcC
Confidence 4788999999999999888888888888889888886531110 113556799999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
++.++++++.++.+++||+++++....+..|...+.++.|+|+++.+++++.|+.+++||++++
T Consensus 146 ~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~ 209 (289)
T cd00200 146 DGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTG 209 (289)
T ss_pred cCCEEEEEcCCCcEEEEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCC
Confidence 9999999988999999999988888888888889999999999999999999999999999754
No 66
>KOG0283|consensus
Probab=99.77 E-value=4.9e-18 Score=114.21 Aligned_cols=100 Identities=19% Similarity=0.333 Sum_probs=89.4
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECC-CCCEEEEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDP-SGRLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~i~~~d~~~ 79 (125)
|++++-|.+|++|++....|+..|. |. ..|+|++|+| +.++|++|+-|+.+++|++..
T Consensus 383 LLSSSMDKTVRLWh~~~~~CL~~F~-Hn--------------------dfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d 441 (712)
T KOG0283|consen 383 LLSSSMDKTVRLWHPGRKECLKVFS-HN--------------------DFVTCVAFNPVDDRYFISGSLDGKVRLWSISD 441 (712)
T ss_pred eEeccccccEEeecCCCcceeeEEe-cC--------------------CeeEEEEecccCCCcEeecccccceEEeecCc
Confidence 6899999999999999999999998 55 7999999999 569999999999999999988
Q ss_pred CceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 80 SRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 80 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
.+.+.-.. -..-|++++|.|||+..+.|+.+|..++|+.+..
T Consensus 442 ~~Vv~W~D-l~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~l 483 (712)
T KOG0283|consen 442 KKVVDWND-LRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGL 483 (712)
T ss_pred CeeEeehh-hhhhheeEEeccCCceEEEEEeccEEEEEEccCC
Confidence 77666554 4478999999999999999999999999987653
No 67
>KOG0296|consensus
Probab=99.77 E-value=4.6e-17 Score=101.51 Aligned_cols=123 Identities=19% Similarity=0.274 Sum_probs=107.6
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccccccc----------------------CCCCCeEEEEECC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGT----------------------RQGSPVSALCVDP 58 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----------------------~~~~~i~~~~~~~ 58 (125)
++||+.|....+|++.++..+..+.+|...|.++.|+......+. .....+.=+.|+|
T Consensus 79 ~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp 158 (399)
T KOG0296|consen 79 VATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHP 158 (399)
T ss_pred EEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEecc
Confidence 479999999999999999999999999999999999753322111 2334566788999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.+..++.|+.||.+..|.+.++.....+.+|..++++-.|.|+|+.++++..|++|++||+.++.
T Consensus 159 ~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~ 223 (399)
T KOG0296|consen 159 RAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQ 223 (399)
T ss_pred cccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCc
Confidence 99999999999999999999888888899999999999999999999999999999999998874
No 68
>KOG0292|consensus
Probab=99.77 E-value=1.1e-17 Score=114.20 Aligned_cols=123 Identities=17% Similarity=0.296 Sum_probs=104.3
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcc--ccc-----------------------------------
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYT--TEA----------------------------------- 43 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~----------------------------------- 43 (125)
++++|.|.+|+|||..+.+++..+.+|..=|++.+|++.. +..
T Consensus 108 IlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~ 187 (1202)
T KOG0292|consen 108 ILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGN 187 (1202)
T ss_pred EEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccc
Confidence 5799999999999999999999999999888888886511 000
Q ss_pred --------------ccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCc--eeEEeCCCCCceeEEEEccCCCeEEE
Q psy14458 44 --------------GTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSR--PLQTFKPHTADVRSIRFSPSAYYLLT 107 (125)
Q Consensus 44 --------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~ 107 (125)
.-+|.-.|+-++|+|.-.++++|++|..|++|.....+ .+-+.++|.+.|.++-|+|...+|++
T Consensus 188 ~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlS 267 (1202)
T KOG0292|consen 188 SDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILS 267 (1202)
T ss_pred hhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEe
Confidence 01455688999999999999999999999999876543 45567799999999999999999999
Q ss_pred eecCCeEEEEeCCCCC
Q psy14458 108 GGYDNKLVLTDLQGTM 123 (125)
Q Consensus 108 ~~~d~~i~~~~~~~~~ 123 (125)
.++|++|++||+..+.
T Consensus 268 nsEDksirVwDm~kRt 283 (1202)
T KOG0292|consen 268 NSEDKSIRVWDMTKRT 283 (1202)
T ss_pred cCCCccEEEEeccccc
Confidence 9999999999998764
No 69
>KOG0277|consensus
Probab=99.77 E-value=6.3e-18 Score=101.30 Aligned_cols=104 Identities=24% Similarity=0.389 Sum_probs=87.7
Q ss_pred CeeecCCCeEEEEECCC-CcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCC-CCEEEEEeCCCcEEEEEcC
Q psy14458 1 MVSGHEDSSCVLYDIRG-SRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPS-GRLMVSGHEDSSCVLYDIR 78 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~i~~~d~~ 78 (125)
+++++.||++++||+.. .+++..++.|.. .|.++.|++. +..+++++-|++|++|+..
T Consensus 76 ~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~--------------------EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~ 135 (311)
T KOG0277|consen 76 VIAASGDGSLRLFDLTMPSKPIHKFKEHKR--------------------EVYSVDWNTVRRRIFLTSSWDGTIKLWDPN 135 (311)
T ss_pred EEEEecCceEEEeccCCCCcchhHHHhhhh--------------------heEEeccccccceeEEeeccCCceEeecCC
Confidence 47899999999999643 357888888884 4555566654 4567788999999999999
Q ss_pred CCceeEEeCCCCCceeEEEEcc-CCCeEEEeecCCeEEEEeCCCCCC
Q psy14458 79 GSRPLQTFKPHTADVRSIRFSP-SAYYLLTGGYDNKLVLTDLQGTMR 124 (125)
Q Consensus 79 ~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~~ 124 (125)
.++.+.+|.+|+.-|....|+| .+..++++|.|+++++||++...+
T Consensus 136 r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk 182 (311)
T KOG0277|consen 136 RPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGK 182 (311)
T ss_pred CCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCc
Confidence 9999999999999999999999 678999999999999999986644
No 70
>KOG0640|consensus
Probab=99.77 E-value=2e-17 Score=101.85 Aligned_cols=119 Identities=21% Similarity=0.375 Sum_probs=99.3
Q ss_pred CeeecCCCeEEEEECCCC------------------cceeeecCCCCCeEEEEecCcccccc------------------
Q psy14458 1 MVSGHEDSSCVLYDIRGS------------------RPLQTFKPHTADVRSIHLDHYTTEAG------------------ 44 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~------------------~~~~~~~~~~~~i~~~~~~~~~~~~~------------------ 44 (125)
++||+.|.+|+|.|+... ..+.++..|..+|+.+.|++......
T Consensus 127 vATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~sa 206 (430)
T KOG0640|consen 127 VATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSA 206 (430)
T ss_pred EEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhheEEeccCCCeEEEEecccHHH
Confidence 489999999999998721 23456667889999999987432221
Q ss_pred ------cCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeC---CCCCceeEEEEccCCCeEEEeecCCeEE
Q psy14458 45 ------TRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFK---PHTADVRSIRFSPSAYYLLTGGYDNKLV 115 (125)
Q Consensus 45 ------~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~d~~i~ 115 (125)
.....++.++.|+|.|.+++.|.+...+++||+.+-++..+-. .|.+.|+++.+++.+++.++++.||.|+
T Consensus 207 KrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~Ik 286 (430)
T KOG0640|consen 207 KRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIK 286 (430)
T ss_pred HHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEE
Confidence 1234789999999999999999999999999999988876654 6889999999999999999999999999
Q ss_pred EEeC
Q psy14458 116 LTDL 119 (125)
Q Consensus 116 ~~~~ 119 (125)
+||=
T Consensus 287 lwDG 290 (430)
T KOG0640|consen 287 LWDG 290 (430)
T ss_pred eecc
Confidence 9984
No 71
>KOG0640|consensus
Probab=99.76 E-value=4.7e-18 Score=104.58 Aligned_cols=123 Identities=23% Similarity=0.358 Sum_probs=99.9
Q ss_pred CeeecCCCeEEEEECCCCcceeee--cCCCCCeEEEEecCcccccc-------------------------cCCCCCeEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTF--KPHTADVRSIHLDHYTTEAG-------------------------TRQGSPVSA 53 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~-------------------------~~~~~~i~~ 53 (125)
|++|++|+.|++||.........+ -....+++++.|++...... ..|...|++
T Consensus 187 LiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~ 266 (430)
T KOG0640|consen 187 LISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQ 266 (430)
T ss_pred EEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccccceeE
Confidence 589999999999998654322222 23566889999876332211 246688999
Q ss_pred EEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeC-CCCC-ceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 54 LCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFK-PHTA-DVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~-~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+.+++.+++.++++.||.|++||--.++++.++. +|.+ .|.+..|..+++++++.+.|..+++|++.++.
T Consensus 267 V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R 338 (430)
T KOG0640|consen 267 VRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGR 338 (430)
T ss_pred EEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCc
Confidence 9999999999999999999999999999998886 5654 68889999999999999999999999998763
No 72
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.76 E-value=7.9e-17 Score=99.24 Aligned_cols=117 Identities=27% Similarity=0.433 Sum_probs=99.2
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcc--cc--------------------cccCCCCCeEEEEECCC
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYT--TE--------------------AGTRQGSPVSALCVDPS 59 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~~--------------------~~~~~~~~i~~~~~~~~ 59 (125)
++++.|+.|++||++.++.+..+..+...+.++.|.+.. .. ....+...+.+++|+|+
T Consensus 151 ~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~ 230 (289)
T cd00200 151 ASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPD 230 (289)
T ss_pred EEEcCCCcEEEEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEcCC
Confidence 455669999999999888888888888888888886542 11 01145568999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEe
Q psy14458 60 GRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTD 118 (125)
Q Consensus 60 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~ 118 (125)
+.++++++.++.+++||..+++....+..|...+.++.|+|++.++++++.|+.+++|+
T Consensus 231 ~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 231 GYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred CcEEEEEcCCCcEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 88889888899999999999888888888999999999999999999999999999996
No 73
>KOG0303|consensus
Probab=99.76 E-value=8.9e-18 Score=105.80 Aligned_cols=102 Identities=22% Similarity=0.362 Sum_probs=89.6
Q ss_pred CeeecCCCeEEEEECCCCc-------ceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCC-CEEEEEeCCCcE
Q psy14458 1 MVSGHEDSSCVLYDIRGSR-------PLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSG-RLMVSGHEDSSC 72 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i 72 (125)
+|+|++|.+|+||++..+. ++..+.+|. ..|-.++|+|.. +.|++++.|+.|
T Consensus 97 IASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~--------------------rrVg~V~wHPtA~NVLlsag~Dn~v 156 (472)
T KOG0303|consen 97 IASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQ--------------------RRVGLVQWHPTAPNVLLSAGSDNTV 156 (472)
T ss_pred eecCCCCceEEEEECCCcccccCcccceEEEeecc--------------------eeEEEEeecccchhhHhhccCCceE
Confidence 6899999999999996543 233444555 788899999986 888999999999
Q ss_pred EEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 73 VLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 73 ~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.+|++.+++.+..+. |...|.+++|+.||..+++.+.|+.|++||.+++.
T Consensus 157 ~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~ 206 (472)
T KOG0303|consen 157 SIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGT 206 (472)
T ss_pred EEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCc
Confidence 999999999998888 99999999999999999999999999999998764
No 74
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.76 E-value=1.5e-16 Score=111.45 Aligned_cols=119 Identities=24% Similarity=0.295 Sum_probs=96.7
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCc------------------------ccccccCCCCCeEEEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHY------------------------TTEAGTRQGSPVSALCV 56 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~------------------------~~~~~~~~~~~i~~~~~ 56 (125)
|++|+.|+.|++||++++..+..+..+ ..+.++.|... .......|...|.++.|
T Consensus 591 L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f 669 (793)
T PLN00181 591 LASGSDDGSVKLWSINQGVSIGTIKTK-ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRF 669 (793)
T ss_pred EEEEcCCCEEEEEECCCCcEEEEEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEE
Confidence 579999999999999988887777643 46666666321 11122457788999999
Q ss_pred CCCCCEEEEEeCCCcEEEEEcCCC------ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 57 DPSGRLMVSGHEDSSCVLYDIRGS------RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~d~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
. ++.++++++.|+.|++||++.. ..+..+.+|...+.++.|+|++.+|++|+.|+.+++|+...
T Consensus 670 ~-~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~ 739 (793)
T PLN00181 670 V-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAF 739 (793)
T ss_pred e-CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCC
Confidence 7 6789999999999999999743 56778889999999999999999999999999999999754
No 75
>KOG0265|consensus
Probab=99.76 E-value=1.8e-17 Score=101.17 Aligned_cols=102 Identities=25% Similarity=0.323 Sum_probs=87.4
Q ss_pred CeeecCCCeEEEEECCC-CcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRG-SRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 79 (125)
|+||+.|..|.+|++.. -+....+++|. ..|..+.|.++++.+++++.|.+++.||..+
T Consensus 62 ~aSgG~Dr~I~LWnv~gdceN~~~lkgHs--------------------gAVM~l~~~~d~s~i~S~gtDk~v~~wD~~t 121 (338)
T KOG0265|consen 62 FASGGSDRAIVLWNVYGDCENFWVLKGHS--------------------GAVMELHGMRDGSHILSCGTDKTVRGWDAET 121 (338)
T ss_pred EeecCCcceEEEEeccccccceeeecccc--------------------ceeEeeeeccCCCEEEEecCCceEEEEeccc
Confidence 68999999999999643 23355667777 7889999999999999999999999999999
Q ss_pred CceeEEeCCCCCceeEEEEccCC-CeEEEeecCCeEEEEeCCCC
Q psy14458 80 SRPLQTFKPHTADVRSIRFSPSA-YYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 80 ~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~ 122 (125)
++..+.++.|.+-|+.+.-+.-| .++.+++.|+++++||+|++
T Consensus 122 G~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k 165 (338)
T KOG0265|consen 122 GKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKK 165 (338)
T ss_pred ceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeeccc
Confidence 99999999999999988744333 57788889999999999954
No 76
>KOG0285|consensus
Probab=99.76 E-value=9.9e-18 Score=104.64 Aligned_cols=101 Identities=26% Similarity=0.496 Sum_probs=91.9
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
|+||+.|..+++||+++...+..+.+|. .+|..+.+.|....+++|+.|++|++||++.+
T Consensus 250 l~t~grDst~RvWDiRtr~~V~~l~GH~--------------------~~V~~V~~~~~dpqvit~S~D~tvrlWDl~ag 309 (460)
T KOG0285|consen 250 LVTGGRDSTIRVWDIRTRASVHVLSGHT--------------------NPVASVMCQPTDPQVITGSHDSTVRLWDLRAG 309 (460)
T ss_pred EEecCCcceEEEeeecccceEEEecCCC--------------------CcceeEEeecCCCceEEecCCceEEEeeeccC
Confidence 5899999999999999999999999999 67788888888889999999999999999999
Q ss_pred ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 81 RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+....+..|+..|++++.+|....+++++.|. |+-|++..+
T Consensus 310 kt~~tlt~hkksvral~lhP~e~~fASas~dn-ik~w~~p~g 350 (460)
T KOG0285|consen 310 KTMITLTHHKKSVRALCLHPKENLFASASPDN-IKQWKLPEG 350 (460)
T ss_pred ceeEeeecccceeeEEecCCchhhhhccCCcc-ceeccCCcc
Confidence 99999999999999999999999999998876 777876543
No 77
>KOG0322|consensus
Probab=99.76 E-value=1.4e-17 Score=100.30 Aligned_cols=119 Identities=23% Similarity=0.374 Sum_probs=97.9
Q ss_pred CeeecCCCeEEEEECCCC----------cceeeecCCCCCeEEEEecCcccccc--------------------------
Q psy14458 1 MVSGHEDSSCVLYDIRGS----------RPLQTFKPHTADVRSIHLDHYTTEAG-------------------------- 44 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~----------~~~~~~~~~~~~i~~~~~~~~~~~~~-------------------------- 44 (125)
|+.|-++|.+.+||+.++ +.......|..++.++.+.......-
T Consensus 168 llaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~ 247 (323)
T KOG0322|consen 168 LLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEI 247 (323)
T ss_pred EEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccceE
Confidence 467889999999999887 33333456888999988753111000
Q ss_pred cCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeC
Q psy14458 45 TRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDL 119 (125)
Q Consensus 45 ~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~ 119 (125)
.-....+..+.+-|+++.+++++-|+.|++|+.++..++..++.|.+.|++++|+|+..++++++.|+.|.+|++
T Consensus 248 ~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 248 TLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred EecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 011246778889999999999999999999999999999999999999999999999999999999999999986
No 78
>KOG0294|consensus
Probab=99.75 E-value=8.8e-17 Score=98.82 Aligned_cols=121 Identities=20% Similarity=0.327 Sum_probs=97.7
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccccccc-----------------------------------
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGT----------------------------------- 45 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----------------------------------- 45 (125)
|++|+.||.|.+|+.....++..+++|...|+.+..++.......
T Consensus 100 LlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~ 179 (362)
T KOG0294|consen 100 LLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNKATLVSWSPQ 179 (362)
T ss_pred eeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCCcceeeEEcCC
Confidence 689999999999999999999999999999999998763222111
Q ss_pred --------------------------CCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEE-
Q psy14458 46 --------------------------RQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRF- 98 (125)
Q Consensus 46 --------------------------~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~- 98 (125)
.....+.|+.|- ++..+++|.+++.|.+||.....+...+.+|.+.|..+.+
T Consensus 180 Gd~F~v~~~~~i~i~q~d~A~v~~~i~~~~r~l~~~~l-~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~ 258 (362)
T KOG0294|consen 180 GDHFVVSGRNKIDIYQLDNASVFREIENPKRILCATFL-DGSELLVGGDNEWISLKDTDSDTPLTEFLAHENRVKDIASY 258 (362)
T ss_pred CCEEEEEeccEEEEEecccHhHhhhhhccccceeeeec-CCceEEEecCCceEEEeccCCCccceeeecchhheeeeEEE
Confidence 111234444443 4567888889999999999888999999999999999873
Q ss_pred -ccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 99 -SPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 99 -~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+|++.+|++++.||.|++||++..
T Consensus 259 ~~~~~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 259 TNPEHEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred ecCCceEEEEeccCceEEEEEcccc
Confidence 668899999999999999998765
No 79
>KOG0310|consensus
Probab=99.75 E-value=1e-17 Score=107.36 Aligned_cols=103 Identities=25% Similarity=0.431 Sum_probs=89.3
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCC-CEEEEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSG-RLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~d~~~ 79 (125)
|+.|...|.|++||..+...+..++.|+ .++..+.|+|++ ..+++|++|+.+++||+.+
T Consensus 83 laaGD~sG~V~vfD~k~r~iLR~~~ah~--------------------apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~ 142 (487)
T KOG0310|consen 83 LAAGDESGHVKVFDMKSRVILRQLYAHQ--------------------APVHVTKFSPQDNTMLVSGSDDKVVKYWDLST 142 (487)
T ss_pred EEccCCcCcEEEeccccHHHHHHHhhcc--------------------CceeEEEecccCCeEEEecCCCceEEEEEcCC
Confidence 4778888999999976655677788888 788899999976 6678899999999999999
Q ss_pred CceeEEeCCCCCceeEEEEcc-CCCeEEEeecCCeEEEEeCCCCC
Q psy14458 80 SRPLQTFKPHTADVRSIRFSP-SAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 80 ~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
......+.+|+..|+|.+++| ++.++++|+.||+|++||.++..
T Consensus 143 a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~ 187 (487)
T KOG0310|consen 143 AYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLT 187 (487)
T ss_pred cEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCC
Confidence 887668889999999999999 56688999999999999998763
No 80
>KOG0288|consensus
Probab=99.75 E-value=4.5e-17 Score=102.97 Aligned_cols=116 Identities=20% Similarity=0.326 Sum_probs=92.2
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccc--------------------------ccccCCCCCeEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTT--------------------------EAGTRQGSPVSAL 54 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~--------------------------~~~~~~~~~i~~~ 54 (125)
+++|+.|++|++||.++..+......+. .|+++....... ..........+.+
T Consensus 315 ~~SgH~DkkvRfwD~Rs~~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrv 393 (459)
T KOG0288|consen 315 VISGHFDKKVRFWDIRSADKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRV 393 (459)
T ss_pred eeecccccceEEEeccCCceeeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeecccccccccccee
Confidence 4689999999999999888777766433 666666432111 1112344568899
Q ss_pred EECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCC-CC-ceeEEEEccCCCeEEEeecCCeEEEE
Q psy14458 55 CVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPH-TA-DVRSIRFSPSAYYLLTGGYDNKLVLT 117 (125)
Q Consensus 55 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~-~v~~~~~~~~~~~~~~~~~d~~i~~~ 117 (125)
.|||++.|+++|+.||.|+||++.++++...+... .. .|+++.|+|.|..+++++.++.+++|
T Consensus 394 vfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 394 VFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLW 458 (459)
T ss_pred EECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEec
Confidence 99999999999999999999999999887777633 33 69999999999999999999999999
No 81
>KOG0308|consensus
Probab=99.75 E-value=1.7e-17 Score=109.72 Aligned_cols=110 Identities=25% Similarity=0.439 Sum_probs=91.0
Q ss_pred CeeecCCCeEEEEECCCCcc--eeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRP--LQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIR 78 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~ 78 (125)
+++|+-|+.|.+||+.++.. +..+.. .++.++ ...+...|.+++..+.+..+++|+.++-+++||.+
T Consensus 133 vaSgGLD~~IflWDin~~~~~l~~s~n~--~t~~sl---------~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDpr 201 (735)
T KOG0308|consen 133 VASGGLDRKIFLWDINTGTATLVASFNN--VTVNSL---------GSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPR 201 (735)
T ss_pred EEecCCCccEEEEEccCcchhhhhhccc--cccccC---------CCCCccceeeeecCCcceEEEecCcccceEEeccc
Confidence 48999999999999998743 222221 001000 01344889999999999999999999999999999
Q ss_pred CCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 79 GSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 79 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
+.+.+-.+++|...|+.+..++||..+++++.||+|++||+..
T Consensus 202 t~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgq 244 (735)
T KOG0308|consen 202 TCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQ 244 (735)
T ss_pred cccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccc
Confidence 9999888999999999999999999999999999999999964
No 82
>KOG0282|consensus
Probab=99.75 E-value=8.4e-18 Score=107.79 Aligned_cols=101 Identities=17% Similarity=0.285 Sum_probs=93.8
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCC-CEEEEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSG-RLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~d~~~ 79 (125)
|++++.|+.+++||+++|+++..|... ..++|+.++|++ +.++.|..|+.|+.||+++
T Consensus 273 fLS~sfD~~lKlwDtETG~~~~~f~~~---------------------~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs 331 (503)
T KOG0282|consen 273 FLSASFDRFLKLWDTETGQVLSRFHLD---------------------KVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRS 331 (503)
T ss_pred eeeeecceeeeeeccccceEEEEEecC---------------------CCceeeecCCCCCcEEEEecCCCcEEEEeccc
Confidence 589999999999999999999988743 578999999998 8899999999999999999
Q ss_pred CceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 80 SRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 80 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
++.+.++..|-+.|..+.|-++++.+++.+.|+.+++|+.+..
T Consensus 332 ~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~ 374 (503)
T KOG0282|consen 332 GKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIP 374 (503)
T ss_pred hHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCC
Confidence 9999999989999999999999999999999999999998754
No 83
>KOG0313|consensus
Probab=99.74 E-value=1.6e-16 Score=99.59 Aligned_cols=121 Identities=22% Similarity=0.370 Sum_probs=101.9
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccc-----------------------------ccccCCCCCe
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTT-----------------------------EAGTRQGSPV 51 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-----------------------------~~~~~~~~~i 51 (125)
++||++||.+++||. .|+....+.+|.++|.++.|..... ....+|...|
T Consensus 118 IltgsYDg~~riWd~-~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V 196 (423)
T KOG0313|consen 118 ILTGSYDGTSRIWDL-KGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKRSV 196 (423)
T ss_pred EEEeecCCeeEEEec-CCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhcccccce
Confidence 589999999999996 5899999999999999888743211 1113788999
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEEcC-------------------------CCceeEEeCCCCCceeEEEEccCCCeEE
Q psy14458 52 SALCVDPSGRLMVSGHEDSSCVLYDIR-------------------------GSRPLQTFKPHTADVRSIRFSPSAYYLL 106 (125)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~i~~~d~~-------------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 106 (125)
.++...+++..+++|+.|..|++|+.. ++.++..+.+|..+|.++.|++ ...+.
T Consensus 197 ~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~y 275 (423)
T KOG0313|consen 197 DSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-ATVIY 275 (423)
T ss_pred eEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC-CCceE
Confidence 999999999999999999999999932 1245677889999999999987 67899
Q ss_pred EeecCCeEEEEeCCCCC
Q psy14458 107 TGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 107 ~~~~d~~i~~~~~~~~~ 123 (125)
+++-|-+|+.||+.++.
T Consensus 276 S~SwDHTIk~WDletg~ 292 (423)
T KOG0313|consen 276 SVSWDHTIKVWDLETGG 292 (423)
T ss_pred eecccceEEEEEeeccc
Confidence 99999999999998764
No 84
>KOG0318|consensus
Probab=99.74 E-value=1e-16 Score=104.02 Aligned_cols=103 Identities=17% Similarity=0.333 Sum_probs=85.4
Q ss_pred CeeecCCCeEEEEECCCCcceeeec---CCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEc
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFK---PHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDI 77 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~ 77 (125)
|+|.+.|++|.+||-.+++.+..+. +|. ..|..++|+|++..+++++.|.++++||+
T Consensus 205 Fat~gsDgki~iyDGktge~vg~l~~~~aHk--------------------GsIfalsWsPDs~~~~T~SaDkt~KIWdV 264 (603)
T KOG0318|consen 205 FATAGSDGKIYIYDGKTGEKVGELEDSDAHK--------------------GSIFALSWSPDSTQFLTVSADKTIKIWDV 264 (603)
T ss_pred EEEecCCccEEEEcCCCccEEEEecCCCCcc--------------------ccEEEEEECCCCceEEEecCCceEEEEEe
Confidence 5899999999999999999988887 455 66777777777777777777777777777
Q ss_pred CC-------------------------------------------CceeEEeCCCCCceeEEEEccCCCeEEEeecCCeE
Q psy14458 78 RG-------------------------------------------SRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKL 114 (125)
Q Consensus 78 ~~-------------------------------------------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i 114 (125)
.+ ...+..+.+|...|+++..+|++++|++|++||.|
T Consensus 265 s~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I 344 (603)
T KOG0318|consen 265 STNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHI 344 (603)
T ss_pred eccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceE
Confidence 53 33445556789999999999999999999999999
Q ss_pred EEEeCCCCC
Q psy14458 115 VLTDLQGTM 123 (125)
Q Consensus 115 ~~~~~~~~~ 123 (125)
.-|+..++.
T Consensus 345 ~~W~~~~g~ 353 (603)
T KOG0318|consen 345 NSWDSGSGT 353 (603)
T ss_pred EEEecCCcc
Confidence 999987764
No 85
>KOG1034|consensus
Probab=99.74 E-value=2.6e-17 Score=101.60 Aligned_cols=101 Identities=21% Similarity=0.321 Sum_probs=89.2
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCC-CEEEEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSG-RLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~d~~~ 79 (125)
++.++.-|.|+|.|+.++++...+.+|. ..|+.+.++|.. +++++++.|..|++|++++
T Consensus 108 la~~G~~GvIrVid~~~~~~~~~~~ghG--------------------~sINeik~~p~~~qlvls~SkD~svRlwnI~~ 167 (385)
T KOG1034|consen 108 LAAGGYLGVIRVIDVVSGQCSKNYRGHG--------------------GSINEIKFHPDRPQLVLSASKDHSVRLWNIQT 167 (385)
T ss_pred EEeecceeEEEEEecchhhhccceeccC--------------------ccchhhhcCCCCCcEEEEecCCceEEEEeccC
Confidence 3567778888888888888888888777 778888889976 7889999999999999999
Q ss_pred CceeEEeC---CCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 80 SRPLQTFK---PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 80 ~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
..++..|- +|...|.++.|+++|..|++++.|-.+.+|++..
T Consensus 168 ~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~ 212 (385)
T KOG1034|consen 168 DVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNV 212 (385)
T ss_pred CeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecCh
Confidence 99888775 7999999999999999999999999999999974
No 86
>KOG0274|consensus
Probab=99.73 E-value=5.9e-17 Score=108.39 Aligned_cols=119 Identities=24% Similarity=0.383 Sum_probs=102.4
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccc--------------------ccccCCCCCeEEEEECCCCC
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTT--------------------EAGTRQGSPVSALCVDPSGR 61 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~--------------------~~~~~~~~~i~~~~~~~~~~ 61 (125)
++|+.|.+|++|++.+++++..+.+|..+|+++..+.... .....|...|.++.+.+. +
T Consensus 305 ~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~ 383 (537)
T KOG0274|consen 305 VSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLDEPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE-N 383 (537)
T ss_pred eeccCCceEEEEeccCcceEEEeccccccEEEEEecCCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCc-c
Confidence 5678999999999999999999999999999998764222 223478899999988766 8
Q ss_pred EEEEEeCCCcEEEEEcCCC-ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 62 LMVSGHEDSSCVLYDIRGS-RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 62 ~~~~~~~~~~i~~~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.+++|+.|++|++||+.+. +++..+..|..-|..+.+ .++++++++.|++|++||..++.
T Consensus 384 ~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~--~~~~Lvs~~aD~~Ik~WD~~~~~ 444 (537)
T KOG0274|consen 384 RLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLL--RDNFLVSSSADGTIKLWDAEEGE 444 (537)
T ss_pred eEEeeeeccceEeecCCchhhhhhhhcCCccccccccc--ccceeEeccccccEEEeecccCc
Confidence 9999999999999999999 999999999998877665 78899999999999999987653
No 87
>KOG0275|consensus
Probab=99.73 E-value=3.8e-18 Score=105.73 Aligned_cols=111 Identities=18% Similarity=0.321 Sum_probs=93.1
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
|++|+-||.|.+||..+|+...-++-... ....-....+.|++|+.+.+++++|+.||.|++|.+.++
T Consensus 228 LvsgSvDGFiEVWny~~GKlrKDLkYQAq------------d~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG 295 (508)
T KOG0275|consen 228 LVSGSVDGFIEVWNYTTGKLRKDLKYQAQ------------DNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETG 295 (508)
T ss_pred Eeeccccceeeeehhccchhhhhhhhhhh------------cceeecccceEEEeecccHHHhhccCcCCcEEEEEEecc
Confidence 58999999999999999876544331100 000012278999999999999999999999999999999
Q ss_pred ceeEEeC-CCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 81 RPLQTFK-PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 81 ~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+++..|. +|...|.|+.|+.|+..+++++.|.++++..+.++.
T Consensus 296 ~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK 339 (508)
T KOG0275|consen 296 QCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGK 339 (508)
T ss_pred hHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccch
Confidence 9999997 899999999999999999999999999999987763
No 88
>KOG1446|consensus
Probab=99.73 E-value=6.7e-16 Score=94.65 Aligned_cols=120 Identities=18% Similarity=0.231 Sum_probs=96.3
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEec------------------------CcccccccCCCCCeEEEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLD------------------------HYTTEAGTRQGSPVSALCV 56 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~------------------------~~~~~~~~~~~~~i~~~~~ 56 (125)
|++++.|-++++||..+++++..+..+...+..++|. ...+....+|...|..+++
T Consensus 29 litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNkylRYF~GH~~~V~sL~~ 108 (311)
T KOG1446|consen 29 LITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKYLRYFPGHKKRVNSLSV 108 (311)
T ss_pred EEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCceEEEcCCCCceEEEEEe
Confidence 4678999999999999998887776554444444432 2334455689999999999
Q ss_pred CCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 57 DPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+|-++.+++++.|++|++||++..++...+.....+ ..+|.|+|-++|.+...+.|++||+|+-
T Consensus 109 sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~p--i~AfDp~GLifA~~~~~~~IkLyD~Rs~ 172 (311)
T KOG1446|consen 109 SPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRP--IAAFDPEGLIFALANGSELIKLYDLRSF 172 (311)
T ss_pred cCCCCeEEecccCCeEEeeEecCCCCceEEecCCCc--ceeECCCCcEEEEecCCCeEEEEEeccc
Confidence 999999999999999999999988777666533333 4789999999999999889999999865
No 89
>KOG0300|consensus
Probab=99.72 E-value=5e-17 Score=100.56 Aligned_cols=104 Identities=25% Similarity=0.451 Sum_probs=93.4
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
++++++|.+..+||++++..++.+.+|. ..++-++-+|.+.++++.+.|.+.++||.+..
T Consensus 287 ~vTaSWDRTAnlwDVEtge~v~~LtGHd--------------------~ELtHcstHptQrLVvTsSrDtTFRLWDFRea 346 (481)
T KOG0300|consen 287 MVTASWDRTANLWDVETGEVVNILTGHD--------------------SELTHCSTHPTQRLVVTSSRDTTFRLWDFREA 346 (481)
T ss_pred eeeeeccccceeeeeccCceeccccCcc--------------------hhccccccCCcceEEEEeccCceeEeccchhh
Confidence 4789999999999999999999999998 77788889999999999999999999999864
Q ss_pred -ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCCCC
Q psy14458 81 -RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTMRP 125 (125)
Q Consensus 81 -~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~ 125 (125)
+.+..|.+|...|+++.|.-+ ..+++|+.|.++++||+++...|
T Consensus 347 I~sV~VFQGHtdtVTS~vF~~d-d~vVSgSDDrTvKvWdLrNMRsp 391 (481)
T KOG0300|consen 347 IQSVAVFQGHTDTVTSVVFNTD-DRVVSGSDDRTVKVWDLRNMRSP 391 (481)
T ss_pred cceeeeecccccceeEEEEecC-CceeecCCCceEEEeeeccccCc
Confidence 567789999999999999865 46899999999999999987654
No 90
>KOG1445|consensus
Probab=99.72 E-value=2.6e-17 Score=109.43 Aligned_cols=105 Identities=17% Similarity=0.287 Sum_probs=91.6
Q ss_pred CeeecCCCeEEEEECCCCcc-------eeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCC-CCEEEEEeCCCcE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRP-------LQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPS-GRLMVSGHEDSSC 72 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~-------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~i 72 (125)
|+.+++|+.|++|.+..+.. ...+..|. ..|+++.|+|= .+.+++++.|-+|
T Consensus 643 LAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~--------------------eKI~slRfHPLAadvLa~asyd~Ti 702 (1012)
T KOG1445|consen 643 LAVATDDGQINLWRLTANGLPENEMTPEKILTIHG--------------------EKITSLRFHPLAADVLAVASYDSTI 702 (1012)
T ss_pred eeecccCceEEEEEeccCCCCcccCCcceeeeccc--------------------ceEEEEEecchhhhHhhhhhcccee
Confidence 67899999999999876532 33344444 88999999995 4789999999999
Q ss_pred EEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCCCC
Q psy14458 73 VLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTMRP 125 (125)
Q Consensus 73 ~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~ 125 (125)
++||+++++....+.+|.+.|..++|+|||+.+++.+.||++++|+.+++..|
T Consensus 703 ~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~p 755 (1012)
T KOG1445|consen 703 ELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQP 755 (1012)
T ss_pred eeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCc
Confidence 99999999998899999999999999999999999999999999999988765
No 91
>KOG0310|consensus
Probab=99.71 E-value=3e-16 Score=100.79 Aligned_cols=101 Identities=24% Similarity=0.336 Sum_probs=87.2
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCC-CCEEEEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPS-GRLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~i~~~d~~~ 79 (125)
|++|+.|+.+++||+.+......+.+|+ +-|.|.+++|. +..+++|+-||.|++||++.
T Consensus 126 l~s~sDd~v~k~~d~s~a~v~~~l~~ht--------------------DYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~ 185 (487)
T KOG0310|consen 126 LVSGSDDKVVKYWDLSTAYVQAELSGHT--------------------DYVRCGDISPANDHIVVTGSYDGKVRLWDTRS 185 (487)
T ss_pred EEecCCCceEEEEEcCCcEEEEEecCCc--------------------ceeEeeccccCCCeEEEecCCCceEEEEEecc
Confidence 5789999999999998877655677888 88899999996 46899999999999999998
Q ss_pred C-ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 80 S-RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 80 ~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
. ..+.++. |..+|-.+.+-|.|..|+++++ ..+++||+-++.
T Consensus 186 ~~~~v~eln-hg~pVe~vl~lpsgs~iasAgG-n~vkVWDl~~G~ 228 (487)
T KOG0310|consen 186 LTSRVVELN-HGCPVESVLALPSGSLIASAGG-NSVKVWDLTTGG 228 (487)
T ss_pred CCceeEEec-CCCceeeEEEcCCCCEEEEcCC-CeEEEEEecCCc
Confidence 7 6777777 9999999999999999998865 569999998553
No 92
>KOG0296|consensus
Probab=99.71 E-value=2.7e-16 Score=98.16 Aligned_cols=98 Identities=17% Similarity=0.257 Sum_probs=88.3
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
+|.|+-||+|.|||+...+....+. |. ..|..+.|-+ -.++++++.+|.|+.||.+++
T Consensus 301 ~A~G~vdG~i~iyD~a~~~~R~~c~-he--------------------~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG 358 (399)
T KOG0296|consen 301 AACGSVDGTIAIYDLAASTLRHICE-HE--------------------DGVTKLKWLN-TDYLLTACANGKVRQWDARTG 358 (399)
T ss_pred hhcccccceEEEEecccchhheecc-CC--------------------CceEEEEEcC-cchheeeccCceEEeeecccc
Confidence 3789999999999998777655554 55 6788889988 788999999999999999999
Q ss_pred ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 81 RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
++...+.+|...|.++.++|+.++++++|.|++.+++++.
T Consensus 359 ~l~~~y~GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 359 QLKFTYTGHQMGILDFALSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred ceEEEEecCchheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence 9999999999999999999999999999999999999875
No 93
>KOG0645|consensus
Probab=99.71 E-value=1.6e-15 Score=91.66 Aligned_cols=120 Identities=18% Similarity=0.223 Sum_probs=103.5
Q ss_pred CeeecCCCeEEEEECCCC--cceeeecCCCCCeEEEEecCccc-------------------------ccccCCCCCeEE
Q psy14458 1 MVSGHEDSSCVLYDIRGS--RPLQTFKPHTADVRSIHLDHYTT-------------------------EAGTRQGSPVSA 53 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~--~~~~~~~~~~~~i~~~~~~~~~~-------------------------~~~~~~~~~i~~ 53 (125)
|++++.|.++.||.-..+ +++..+.+|..+|.++.|+.... ...+.|..-|-.
T Consensus 76 La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~ 155 (312)
T KOG0645|consen 76 LASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKH 155 (312)
T ss_pred EEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccE
Confidence 589999999999986543 67888999999999999975332 222477788999
Q ss_pred EEECCCCCEEEEEeCCCcEEEEEcCC---CceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 54 LCVDPSGRLMVSGHEDSSCVLYDIRG---SRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~i~~~d~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
+.|+|...+|++++.|++|++|.-.. -++...+.+|.+.|.++.|++.|..+++++.|+++++|-+.
T Consensus 156 V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~ 225 (312)
T KOG0645|consen 156 VIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLY 225 (312)
T ss_pred EEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeec
Confidence 99999999999999999999998763 35788899999999999999999999999999999999743
No 94
>KOG1036|consensus
Probab=99.71 E-value=9.1e-16 Score=93.96 Aligned_cols=120 Identities=20% Similarity=0.243 Sum_probs=97.3
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecC--------------------cccccccCCCCCeEEEEECCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDH--------------------YTTEAGTRQGSPVSALCVDPSG 60 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~--------------------~~~~~~~~~~~~i~~~~~~~~~ 60 (125)
|+.+++||++++||+........++ +..|+.+++|.+ ....+...|...+.|+..++..
T Consensus 28 LLvssWDgslrlYdv~~~~l~~~~~-~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~~~~~~igth~~~i~ci~~~~~~ 106 (323)
T KOG1036|consen 28 LLVSSWDGSLRLYDVPANSLKLKFK-HGAPLLDCAFADESTIVTGGLDGQVRRYDLNTGNEDQIGTHDEGIRCIEYSYEV 106 (323)
T ss_pred EEEEeccCcEEEEeccchhhhhhee-cCCceeeeeccCCceEEEeccCceEEEEEecCCcceeeccCCCceEEEEeeccC
Confidence 5778899999999998776555555 777888877754 2233334788999999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCCC
Q psy14458 61 RLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTMR 124 (125)
Q Consensus 61 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~ 124 (125)
..+++|+.|++|++||.+.......+. ..++|.++.. .+..|+.|+.|..+.+||+++...
T Consensus 107 ~~vIsgsWD~~ik~wD~R~~~~~~~~d-~~kkVy~~~v--~g~~LvVg~~~r~v~iyDLRn~~~ 167 (323)
T KOG1036|consen 107 GCVISGSWDKTIKFWDPRNKVVVGTFD-QGKKVYCMDV--SGNRLVVGTSDRKVLIYDLRNLDE 167 (323)
T ss_pred CeEEEcccCccEEEEeccccccccccc-cCceEEEEec--cCCEEEEeecCceEEEEEcccccc
Confidence 999999999999999999866666666 4457888877 677899999999999999997654
No 95
>KOG0293|consensus
Probab=99.70 E-value=8.2e-17 Score=102.10 Aligned_cols=102 Identities=15% Similarity=0.310 Sum_probs=84.0
Q ss_pred eecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECC-CCCEEEEEeCCCcEEEEEcCCCc
Q psy14458 3 SGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDP-SGRLMVSGHEDSSCVLYDIRGSR 81 (125)
Q Consensus 3 t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~i~~~d~~~~~ 81 (125)
+.-.+..+++||+...+.+..+.+|... ..+-.-||-- +..++++|++|+.|+||+..+++
T Consensus 412 vnL~~qei~LWDl~e~~lv~kY~Ghkq~------------------~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgk 473 (519)
T KOG0293|consen 412 VNLQDQEIHLWDLEENKLVRKYFGHKQG------------------HFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGK 473 (519)
T ss_pred EEcccCeeEEeecchhhHHHHhhccccc------------------ceEEEeccCCCCcceEEecCCCceEEEEEccCCc
Confidence 3345778999999988888888887632 2333344543 34789999999999999999999
Q ss_pred eeEEeCCCCCceeEEEEcc-CCCeEEEeecCCeEEEEeCCCC
Q psy14458 82 PLQTFKPHTADVRSIRFSP-SAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 82 ~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
++..+.+|...|+|++|+| +...+|+++.||+|++|.....
T Consensus 474 ll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~~ 515 (519)
T KOG0293|consen 474 LLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSDN 515 (519)
T ss_pred eeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCCcc
Confidence 9999999999999999999 6789999999999999987643
No 96
>KOG0639|consensus
Probab=99.70 E-value=5.2e-17 Score=105.35 Aligned_cols=105 Identities=23% Similarity=0.392 Sum_probs=90.7
Q ss_pred CeeecCCCeEEEEECCCCccee--eecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQ--TFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIR 78 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~ 78 (125)
|++|++-.++.|||+....+.. .+.... .....++.+|+.++.++++.||.|.|||++
T Consensus 480 LivGGeastlsiWDLAapTprikaeltssa--------------------paCyALa~spDakvcFsccsdGnI~vwDLh 539 (705)
T KOG0639|consen 480 LIVGGEASTLSIWDLAAPTPRIKAELTSSA--------------------PACYALAISPDAKVCFSCCSDGNIAVWDLH 539 (705)
T ss_pred EEeccccceeeeeeccCCCcchhhhcCCcc--------------------hhhhhhhcCCccceeeeeccCCcEEEEEcc
Confidence 5789999999999998655422 222111 456788999999999999999999999999
Q ss_pred CCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCCCC
Q psy14458 79 GSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTMRP 125 (125)
Q Consensus 79 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~ 125 (125)
+...+..|.+|...+.||..++||.-|.+|+.|.+++.||++.++++
T Consensus 540 nq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrql 586 (705)
T KOG0639|consen 540 NQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQL 586 (705)
T ss_pred cceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhh
Confidence 99999999999999999999999999999999999999999988753
No 97
>KOG0268|consensus
Probab=99.69 E-value=1.8e-16 Score=99.09 Aligned_cols=124 Identities=25% Similarity=0.414 Sum_probs=99.2
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccccccc-----------------------------------
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGT----------------------------------- 45 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----------------------------------- 45 (125)
+++|+.||.|++||+..-.++..|+.|.+.|+.++++...+....
T Consensus 82 ~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~~~~~tvgdDKtvK~wk~~~~p~~tilg~s~~~gIdh~~~~~~ 161 (433)
T KOG0268|consen 82 VASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQTSFFTVGDDKTVKQWKIDGPPLHTILGKSVYLGIDHHRKNSV 161 (433)
T ss_pred hhccccCceEEEEehhhhhhhheeecccCceeeEEecccceEEecCCcceeeeeccCCcceeeecccccccccccccccc
Confidence 589999999999999999999999999999998886431110000
Q ss_pred -----------------------CCCCCeEEEEECCCC-CEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccC
Q psy14458 46 -----------------------RQGSPVSALCVDPSG-RLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPS 101 (125)
Q Consensus 46 -----------------------~~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~ 101 (125)
--...|.++.|+|.. ..|+++..|+.|.+||.++..++.... ....-+.++|+|+
T Consensus 162 FaTcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi-~~mRTN~IswnPe 240 (433)
T KOG0268|consen 162 FATCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVI-LTMRTNTICWNPE 240 (433)
T ss_pred ccccCceeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceee-eeccccceecCcc
Confidence 001568899999976 566777799999999999998877665 3445568999999
Q ss_pred CCeEEEeecCCeEEEEeCCCCCCC
Q psy14458 102 AYYLLTGGYDNKLVLTDLQGTMRP 125 (125)
Q Consensus 102 ~~~~~~~~~d~~i~~~~~~~~~~~ 125 (125)
+..++++++|..++.+|++....|
T Consensus 241 afnF~~a~ED~nlY~~DmR~l~~p 264 (433)
T KOG0268|consen 241 AFNFVAANEDHNLYTYDMRNLSRP 264 (433)
T ss_pred ccceeeccccccceehhhhhhccc
Confidence 999999999999999999877655
No 98
>KOG4283|consensus
Probab=99.69 E-value=4.4e-16 Score=95.41 Aligned_cols=101 Identities=25% Similarity=0.327 Sum_probs=86.8
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCC---CCEEEEEeCCCcEEEEEc
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPS---GRLMVSGHEDSSCVLYDI 77 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~i~~~d~ 77 (125)
|.+++-|.+++|||..+.+....|+ .+ ..|.+-+|+|- -.++++|..+-.|++.|+
T Consensus 117 FtssSFDhtlKVWDtnTlQ~a~~F~-me--------------------~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi 175 (397)
T KOG4283|consen 117 FTSSSFDHTLKVWDTNTLQEAVDFK-ME--------------------GKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDI 175 (397)
T ss_pred eecccccceEEEeecccceeeEEee-cC--------------------ceeehhhcChhhhcceEEEEecCCCcEEEEec
Confidence 4688999999999999888777766 33 57778888884 357888989999999999
Q ss_pred CCCceeEEeCCCCCceeEEEEccCCC-eEEEeecCCeEEEEeCCCC
Q psy14458 78 RGSRPLQTFKPHTADVRSIRFSPSAY-YLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 78 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~d~~i~~~~~~~~ 122 (125)
..+...+.+.+|.+.|.++.|+|..+ .|++|+.||.+++||++..
T Consensus 176 ~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRra 221 (397)
T KOG4283|consen 176 ASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRA 221 (397)
T ss_pred cCCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecc
Confidence 99999999999999999999999654 5688999999999999864
No 99
>KOG0300|consensus
Probab=99.68 E-value=4e-16 Score=96.59 Aligned_cols=121 Identities=20% Similarity=0.266 Sum_probs=105.3
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccc-------------------------------------
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAG------------------------------------- 44 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~------------------------------------- 44 (125)
.+++.|.+.++|.+++++|+..+.+|.+.|+++.|++......
T Consensus 164 gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~s 243 (481)
T KOG0300|consen 164 GTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHS 243 (481)
T ss_pred eecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcc
Confidence 5789999999999999999999999999999999864211100
Q ss_pred -------------------------cCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEc
Q psy14458 45 -------------------------TRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFS 99 (125)
Q Consensus 45 -------------------------~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~ 99 (125)
..|...+.+..|-..+..+++++-|.+..+||+.+++.+..+.+|....++.+-+
T Consensus 244 De~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstH 323 (481)
T KOG0300|consen 244 DEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTH 323 (481)
T ss_pred cccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccC
Confidence 1334567777888889999999999999999999999999999999999999999
Q ss_pred cCCCeEEEeecCCeEEEEeCCCC
Q psy14458 100 PSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 100 ~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
|..+++++.+.|.+.++||++..
T Consensus 324 ptQrLVvTsSrDtTFRLWDFRea 346 (481)
T KOG0300|consen 324 PTQRLVVTSSRDTTFRLWDFREA 346 (481)
T ss_pred CcceEEEEeccCceeEeccchhh
Confidence 99999999999999999999743
No 100
>KOG0289|consensus
Probab=99.68 E-value=2.9e-15 Score=95.59 Aligned_cols=123 Identities=24% Similarity=0.424 Sum_probs=105.0
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccccc----------------------ccCCCCCeEEEEECC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEA----------------------GTRQGSPVSALCVDP 58 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----------------------~~~~~~~i~~~~~~~ 58 (125)
+++|+.|..+.++|..+++.+..+.+|...|..+.+++..... ...|..+|+.+..+|
T Consensus 234 ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~ 313 (506)
T KOG0289|consen 234 ILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHP 313 (506)
T ss_pred ceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCccccccccccceeeeecc
Confidence 4789999999999999999999999999999999987633211 135678899999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEeCCC--CCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPH--TADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
++.||+++++|++.-+.|.+++..+...... .-.+++..|+|||.++.+|..|+.+++||+.+..
T Consensus 314 tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~ 380 (506)
T KOG0289|consen 314 TGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQT 380 (506)
T ss_pred CCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCcc
Confidence 9999999999999999999999877766532 2347899999999999999999999999997653
No 101
>KOG0267|consensus
Probab=99.68 E-value=2.5e-16 Score=105.44 Aligned_cols=122 Identities=26% Similarity=0.436 Sum_probs=106.8
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccc----------------------cccCCCCCeEEEEECC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTE----------------------AGTRQGSPVSALCVDP 58 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~----------------------~~~~~~~~i~~~~~~~ 58 (125)
+++|++|.++-+|.......+..+.+|..+|.++.++..... .+..|...+..+.|+|
T Consensus 43 ~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P 122 (825)
T KOG0267|consen 43 LVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHP 122 (825)
T ss_pred eccCCCceeeccccccCCchhheeeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeecc
Confidence 468999999999998777777778999999999999753221 1235667899999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
.+.+++.|+.|+-+++||.+..-+.+.+.+|...|..+.|+|+|+++++++.|.++++||+..+
T Consensus 123 ~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~ag 186 (825)
T KOG0267|consen 123 YGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAG 186 (825)
T ss_pred ceEEeccccccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCCcceeeeeccccc
Confidence 9999999999999999999988889999999999999999999999999999999999999654
No 102
>KOG4283|consensus
Probab=99.68 E-value=6.7e-16 Score=94.63 Aligned_cols=103 Identities=25% Similarity=0.391 Sum_probs=88.2
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCE-EEEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRL-MVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~i~~~d~~~ 79 (125)
+|+|..|-+|++.|+.+|.....+.+|. ..|.++.|+|..++ |++|+.||.|++||++.
T Consensus 161 iA~gtr~~~VrLCDi~SGs~sH~LsGHr--------------------~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRr 220 (397)
T KOG4283|consen 161 IAAGTRDVQVRLCDIASGSFSHTLSGHR--------------------DGVLAVEWSPSSEWVLATGSADGAIRLWDIRR 220 (397)
T ss_pred EEEecCCCcEEEEeccCCcceeeecccc--------------------CceEEEEeccCceeEEEecCCCceEEEEEeec
Confidence 4788999999999999999999999999 78888899998765 68999999999999975
Q ss_pred C-ce--------------eEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 80 S-RP--------------LQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 80 ~-~~--------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
- .+ +..-.+|.+.|+.++|..++.++++++.|..+++|++.++.
T Consensus 221 asgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~ 279 (397)
T KOG4283|consen 221 ASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGR 279 (397)
T ss_pred ccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecccCc
Confidence 2 11 11223578899999999999999999999999999998764
No 103
>KOG0268|consensus
Probab=99.68 E-value=3.4e-16 Score=97.89 Aligned_cols=120 Identities=23% Similarity=0.356 Sum_probs=91.7
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccc-----------------------cccCCCCCeEEEEEC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTE-----------------------AGTRQGSPVSALCVD 57 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----------------------~~~~~~~~i~~~~~~ 57 (125)
|++++.|+.|.+||++..+++..+. -...-+.++|++.... ....|.+.+.+++|+
T Consensus 203 Las~~sDrsIvLyD~R~~~Pl~KVi-~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfs 281 (433)
T KOG0268|consen 203 LASCASDRSIVLYDLRQASPLKKVI-LTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFS 281 (433)
T ss_pred eeeeccCCceEEEecccCCccceee-eeccccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccC
Confidence 5788899999999999998876543 2223356677662211 113667899999999
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCceeEEeC-CCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 58 PSGRLMVSGHEDSSCVLYDIRGSRPLQTFK-PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 58 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
|.|..+++|+-|.+|+||..+.+..-..+. ..-+.|.|+.|+.|.+++++||.|+.|++|--..
T Consensus 282 ptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~A 346 (433)
T KOG0268|consen 282 PTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKA 346 (433)
T ss_pred CCcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecch
Confidence 999999999999999999987764332221 1234689999999999999999999999996543
No 104
>KOG1332|consensus
Probab=99.67 E-value=2.8e-15 Score=89.66 Aligned_cols=122 Identities=17% Similarity=0.325 Sum_probs=98.4
Q ss_pred CeeecCCCeEEEEECCCCc---ceeeecCCCCCeEEEEecCccc--------------------------ccccCCCCCe
Q psy14458 1 MVSGHEDSSCVLYDIRGSR---PLQTFKPHTADVRSIHLDHYTT--------------------------EAGTRQGSPV 51 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~---~~~~~~~~~~~i~~~~~~~~~~--------------------------~~~~~~~~~i 51 (125)
|+|++.|++|+||..+.+. ++..+.+|.+|+..+.|..... .....|...+
T Consensus 26 lATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SV 105 (299)
T KOG1332|consen 26 LATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASV 105 (299)
T ss_pred eeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhhhcccc
Confidence 6899999999999998754 5678899999999999864221 1113677899
Q ss_pred EEEEECCC--CCEEEEEeCCCcEEEEEcCCC-c--eeEEeCCCCCceeEEEEccC---C-----------CeEEEeecCC
Q psy14458 52 SALCVDPS--GRLMVSGHEDSSCVLYDIRGS-R--PLQTFKPHTADVRSIRFSPS---A-----------YYLLTGGYDN 112 (125)
Q Consensus 52 ~~~~~~~~--~~~~~~~~~~~~i~~~d~~~~-~--~~~~~~~~~~~v~~~~~~~~---~-----------~~~~~~~~d~ 112 (125)
++++|-|+ +-.|++++.||.|.+.+.+.. . .......|.-.|++++|.|- | +-|++|+.|.
T Consensus 106 NsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn 185 (299)
T KOG1332|consen 106 NSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDN 185 (299)
T ss_pred eeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCcc
Confidence 99999997 478899999999999998764 2 23334579999999999994 4 5699999999
Q ss_pred eEEEEeCCCC
Q psy14458 113 KLVLTDLQGT 122 (125)
Q Consensus 113 ~i~~~~~~~~ 122 (125)
.+++|...++
T Consensus 186 ~VkiW~~~~~ 195 (299)
T KOG1332|consen 186 LVKIWKFDSD 195 (299)
T ss_pred ceeeeecCCc
Confidence 9999998764
No 105
>KOG0293|consensus
Probab=99.67 E-value=7.6e-16 Score=97.80 Aligned_cols=102 Identities=22% Similarity=0.369 Sum_probs=89.0
Q ss_pred CeeecCCCeEEEEECCCCcc---eeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEc
Q psy14458 1 MVSGHEDSSCVLYDIRGSRP---LQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDI 77 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~ 77 (125)
|||++.|.+..+|++..... ..++.+|. .+|.-+.|||+.+++++++.+..+.+||+
T Consensus 239 LAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~--------------------~~V~yi~wSPDdryLlaCg~~e~~~lwDv 298 (519)
T KOG0293|consen 239 LASASKDSTAIIWIVVYDVHFKLKKTLVGHS--------------------QPVSYIMWSPDDRYLLACGFDEVLSLWDV 298 (519)
T ss_pred EeeccCCceEEEEEEecCcceeeeeeeeccc--------------------CceEEEEECCCCCeEEecCchHheeeccC
Confidence 68999999999999866544 45566676 78899999999999999999999999999
Q ss_pred CCCceeEEeC-CCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 78 RGSRPLQTFK-PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 78 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
.++.....+. ++...+.+.+|.|||..+++|+.|+++..||+...
T Consensus 299 ~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn 344 (519)
T KOG0293|consen 299 DTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGN 344 (519)
T ss_pred CcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcc
Confidence 9999888776 34578899999999999999999999999998764
No 106
>KOG2110|consensus
Probab=99.67 E-value=4.8e-15 Score=92.77 Aligned_cols=96 Identities=22% Similarity=0.481 Sum_probs=85.8
Q ss_pred CCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCc-EEEEEcCCCceeEE
Q psy14458 7 DSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSS-CVLYDIRGSRPLQT 85 (125)
Q Consensus 7 d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-i~~~d~~~~~~~~~ 85 (125)
-|.|.+||+.+.++...+..|. ..+.+++|+++|.+++++++.|+ |||+.+.+++.+.+
T Consensus 152 ~GdV~l~d~~nl~~v~~I~aH~--------------------~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~e 211 (391)
T KOG2110|consen 152 SGDVVLFDTINLQPVNTINAHK--------------------GPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYE 211 (391)
T ss_pred CceEEEEEcccceeeeEEEecC--------------------CceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeee
Confidence 5789999999999998888888 78899999999999999999999 79999999999999
Q ss_pred eCCC--CCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 86 FKPH--TADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 86 ~~~~--~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
|+.- ...+.+++|+|++++|++.+..++|+++-+...
T Consensus 212 FRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~ 250 (391)
T KOG2110|consen 212 FRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLEKV 250 (391)
T ss_pred eeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEeccc
Confidence 9833 235678999999999999999999999988654
No 107
>KOG1408|consensus
Probab=99.66 E-value=1.4e-15 Score=102.38 Aligned_cols=104 Identities=17% Similarity=0.305 Sum_probs=94.5
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
++++++|..|+|||+.++++...|++..+ +....-.+.+.|.+.|+++.+.|.++.++|..++
T Consensus 611 v~t~cQDrnirif~i~sgKq~k~FKgs~~-----------------~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sg 673 (1080)
T KOG1408|consen 611 VVTVCQDRNIRIFDIESGKQVKSFKGSRD-----------------HEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSG 673 (1080)
T ss_pred EEEEecccceEEEeccccceeeeeccccc-----------------CCCceEEEEECCCccEEEEeecCCceEEEEeccc
Confidence 47899999999999999999999987542 2255667889999999999999999999999999
Q ss_pred ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 81 RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
+++..+.+|...|+.+.|.+|.++|++.++||.|.+|.+..
T Consensus 674 EcvA~m~GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~lp~ 714 (1080)
T KOG1408|consen 674 ECVAQMTGHSEAVTGVKFLNDCKHLISVSGDGCIFVWKLPL 714 (1080)
T ss_pred hhhhhhcCcchheeeeeecccchhheeecCCceEEEEECch
Confidence 99999999999999999999999999999999999998753
No 108
>KOG0306|consensus
Probab=99.66 E-value=8.1e-16 Score=103.50 Aligned_cols=102 Identities=23% Similarity=0.411 Sum_probs=94.5
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
||.|-.||.|++|++.+......+.+|. ..|+++.|+..|..+++|+.|+.|-+||+-..
T Consensus 80 lAVGYaDGsVqif~~~s~~~~~tfngHK--------------------~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E 139 (888)
T KOG0306|consen 80 LAVGYADGSVQIFSLESEEILITFNGHK--------------------AAVTTLKFDKIGTRLASGSKDTDIIVWDLVGE 139 (888)
T ss_pred EEEEecCceEEeeccCCCceeeeecccc--------------------cceEEEEEcccCceEeecCCCccEEEEEeccc
Confidence 4789999999999999888888899988 78899999999999999999999999999988
Q ss_pred ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 81 RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
.-...+++|+..|+..-|..+.+++++.|.|+.|++||+.+-
T Consensus 140 ~Gl~rL~GHkd~iT~~~F~~~~~~lvS~sKDs~iK~WdL~tq 181 (888)
T KOG0306|consen 140 EGLFRLRGHKDSITQALFLNGDSFLVSVSKDSMIKFWDLETQ 181 (888)
T ss_pred eeeEEeecchHHHhHHhccCCCeEEEEeccCceEEEEecccc
Confidence 888889999999999888887899999999999999999764
No 109
>KOG2111|consensus
Probab=99.66 E-value=1.6e-14 Score=89.10 Aligned_cols=78 Identities=21% Similarity=0.389 Sum_probs=71.0
Q ss_pred cCCCCCeEEEEECCCCCEEEEEeCCCc-EEEEEcCCCceeEEeC--CCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 45 TRQGSPVSALCVDPSGRLMVSGHEDSS-CVLYDIRGSRPLQTFK--PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 45 ~~~~~~i~~~~~~~~~~~~~~~~~~~~-i~~~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
.+|...|.|++++.+|.++++++..|+ |+|||..+++.+.+++ .....+.+++|+|+..+++++|..|+++++.++.
T Consensus 178 ~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 178 NAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred EcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEeec
Confidence 378899999999999999999999999 8999999999999987 3446799999999999999999999999999875
Q ss_pred C
Q psy14458 122 T 122 (125)
Q Consensus 122 ~ 122 (125)
.
T Consensus 258 ~ 258 (346)
T KOG2111|consen 258 T 258 (346)
T ss_pred C
Confidence 3
No 110
>KOG0306|consensus
Probab=99.66 E-value=6.6e-16 Score=103.90 Aligned_cols=101 Identities=17% Similarity=0.300 Sum_probs=95.1
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
++||+.|..|++|-++-|.|...+-+|. +.|.++.|-|...++++++.|+.++-||...-
T Consensus 565 ivTgSADKnVKiWGLdFGDCHKS~fAHd--------------------DSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kF 624 (888)
T KOG0306|consen 565 IVTGSADKNVKIWGLDFGDCHKSFFAHD--------------------DSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKF 624 (888)
T ss_pred EEeccCCCceEEeccccchhhhhhhccc--------------------CceeEEEEcccceeEEEecCcceEEeechhhh
Confidence 5899999999999999999999888888 78899999999999999999999999999999
Q ss_pred ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 81 RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
+.++.+.+|...|+|++..|+|.+++++|+|..|++|....
T Consensus 625 e~iq~L~~H~~ev~cLav~~~G~~vvs~shD~sIRlwE~td 665 (888)
T KOG0306|consen 625 EEIQKLDGHHSEVWCLAVSPNGSFVVSSSHDKSIRLWERTD 665 (888)
T ss_pred hhheeeccchheeeeeEEcCCCCeEEeccCCceeEeeeccC
Confidence 99999999999999999999999999999999999998654
No 111
>KOG0308|consensus
Probab=99.66 E-value=1.8e-15 Score=100.45 Aligned_cols=102 Identities=29% Similarity=0.461 Sum_probs=96.2
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
|++|+..+-+++||.++.+.+..+++|+ ..|.++..+++|..+++++.||+|++||+...
T Consensus 186 ivsGgtek~lr~wDprt~~kimkLrGHT--------------------dNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQ 245 (735)
T KOG0308|consen 186 IVSGGTEKDLRLWDPRTCKKIMKLRGHT--------------------DNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQ 245 (735)
T ss_pred EEecCcccceEEeccccccceeeeeccc--------------------cceEEEEEcCCCCeEeecCCCceEEeeecccc
Confidence 4789999999999999999999999999 78889999999999999999999999999999
Q ss_pred ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 81 RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+++.++..|+..|+++..+|+=.++.+|+.|+.|..=|+++.
T Consensus 246 rCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~ 287 (735)
T KOG0308|consen 246 RCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNP 287 (735)
T ss_pred ceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCc
Confidence 999999999999999999999999999999999999999874
No 112
>KOG0269|consensus
Probab=99.66 E-value=6.4e-16 Score=104.07 Aligned_cols=103 Identities=19% Similarity=0.389 Sum_probs=90.7
Q ss_pred CeeecCCCeEEEEECCC---CcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCC-CEEEEEeCCCcEEEEE
Q psy14458 1 MVSGHEDSSCVLYDIRG---SRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSG-RLMVSGHEDSSCVLYD 76 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~d 76 (125)
|+|++..|.|.+||+.. .+.+..|..|. -.+++++|++.. +++++|++||.|++||
T Consensus 103 IAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~--------------------Rs~~~ldfh~tep~iliSGSQDg~vK~~D 162 (839)
T KOG0269|consen 103 IATCSTNGVISVWDLNKSIRNKLLTVFNEHE--------------------RSANKLDFHSTEPNILISGSQDGTVKCWD 162 (839)
T ss_pred heeecCCCcEEEEecCccccchhhhHhhhhc--------------------cceeeeeeccCCccEEEecCCCceEEEEe
Confidence 68999999999999976 56777888888 677888888864 7899999999999999
Q ss_pred cCCCceeEEeCCCCCceeEEEEcc-CCCeEEEeecCCeEEEEeCCCCC
Q psy14458 77 IRGSRPLQTFKPHTADVRSIRFSP-SAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 77 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
++..+...++......|+.+.|+| .+..++++...|.+.+||+|...
T Consensus 163 lR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~ 210 (839)
T KOG0269|consen 163 LRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPD 210 (839)
T ss_pred eecccccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCch
Confidence 999988888888888899999999 67899999999999999998653
No 113
>KOG0973|consensus
Probab=99.66 E-value=1.5e-15 Score=104.86 Aligned_cols=117 Identities=17% Similarity=0.218 Sum_probs=88.9
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCC-CeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTA-DVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 79 (125)
||+|++|+.|.||..... .....-+.++ ....=.| ........|...|..++|+|++.++++++.|++|.+|+.++
T Consensus 84 lAsGSDD~~v~iW~~~~~-~~~~~fgs~g~~~~vE~w--k~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~t 160 (942)
T KOG0973|consen 84 LASGSDDRLVMIWERAEI-GSGTVFGSTGGAKNVESW--KVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKT 160 (942)
T ss_pred EeeccCcceEEEeeeccc-CCccccccccccccccee--eEEEEEecCCCccceeccCCCccEEEEecccceEEEEcccc
Confidence 689999999999998741 1111000000 0000000 01111223558899999999999999999999999999999
Q ss_pred CceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 80 SRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 80 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
.+.+..+++|...|..+.|.|-|++|++-+.|++|++|+..
T Consensus 161 F~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~ 201 (942)
T KOG0973|consen 161 FELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTS 201 (942)
T ss_pred ceeeeeeecccccccceEECCccCeeeeecCCceEEEEEcc
Confidence 99999999999999999999999999999999999999854
No 114
>KOG0772|consensus
Probab=99.66 E-value=1.3e-15 Score=99.06 Aligned_cols=122 Identities=16% Similarity=0.282 Sum_probs=88.9
Q ss_pred CeeecCCCeEEEEECCCCc----ceeeec-CCCCCeEEEEecCcc----------------------------------c
Q psy14458 1 MVSGHEDSSCVLYDIRGSR----PLQTFK-PHTADVRSIHLDHYT----------------------------------T 41 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~----~~~~~~-~~~~~i~~~~~~~~~----------------------------------~ 41 (125)
|++|+.|-.|++||+.... ....+. ....+|++++|.... .
T Consensus 182 ~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~DRdG~~~~e~~KGDQYI~Dm 261 (641)
T KOG0772|consen 182 FVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLLDRDGFEIVEFSKGDQYIRDM 261 (641)
T ss_pred eeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeEEccCCceeeeeeccchhhhhh
Confidence 6899999999999997542 222222 234567777764311 1
Q ss_pred ccccCCCCCeEEEEECCCC-CEEEEEeCCCcEEEEEcCCCc-eeEEeC-----CCCCceeEEEEccCCCeEEEeecCCeE
Q psy14458 42 EAGTRQGSPVSALCVDPSG-RLMVSGHEDSSCVLYDIRGSR-PLQTFK-----PHTADVRSIRFSPSAYYLLTGGYDNKL 114 (125)
Q Consensus 42 ~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~d~~~~~-~~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~d~~i 114 (125)
..+..|...++|-+|+|.. +.+++++.||++++||+...+ ....++ +-+-.+....|+|++..|++|+.||.|
T Consensus 262 ~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSI 341 (641)
T KOG0772|consen 262 YNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSI 341 (641)
T ss_pred hccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCce
Confidence 2223667889999999975 778999999999999997743 233333 122357789999999999999999999
Q ss_pred EEEeCCCC
Q psy14458 115 VLTDLQGT 122 (125)
Q Consensus 115 ~~~~~~~~ 122 (125)
.+|+.++.
T Consensus 342 Q~W~~~~~ 349 (641)
T KOG0772|consen 342 QIWDKGSR 349 (641)
T ss_pred eeeecCCc
Confidence 99997654
No 115
>KOG1407|consensus
Probab=99.64 E-value=6.7e-15 Score=88.75 Aligned_cols=69 Identities=22% Similarity=0.359 Sum_probs=49.0
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 53 ALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
-++|+-++.+++..+..|.|.|......+++.++++|...+.||.|+|+|+++++|+.|..+.+||++.
T Consensus 152 e~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~E 220 (313)
T KOG1407|consen 152 EISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDE 220 (313)
T ss_pred eeeecCCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhH
Confidence 333443333333333344444444444567777888999999999999999999999999999999863
No 116
>KOG0646|consensus
Probab=99.63 E-value=7.1e-15 Score=94.20 Aligned_cols=102 Identities=21% Similarity=0.316 Sum_probs=87.2
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC-
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRG- 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~- 79 (125)
++|++.|.++++||+..+..+..+.- . ..+.+++++|-+..++.|+.+|.|.+.++..
T Consensus 191 l~TaS~D~t~k~wdlS~g~LLlti~f-p--------------------~si~av~lDpae~~~yiGt~~G~I~~~~~~~~ 249 (476)
T KOG0646|consen 191 LYTASEDRTIKLWDLSLGVLLLTITF-P--------------------SSIKAVALDPAERVVYIGTEEGKIFQNLLFKL 249 (476)
T ss_pred EEEecCCceEEEEEeccceeeEEEec-C--------------------CcceeEEEcccccEEEecCCcceEEeeehhcC
Confidence 57899999999999999988777652 2 5789999999999999999999999887643
Q ss_pred ---------------CceeEEeCCCCC--ceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 80 ---------------SRPLQTFKPHTA--DVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 80 ---------------~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+..+..+.+|.+ .|+|++++-||..|++|+.||++++||+.+.+
T Consensus 250 ~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q 310 (476)
T KOG0646|consen 250 SGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQ 310 (476)
T ss_pred CcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHH
Confidence 124556667887 99999999999999999999999999987653
No 117
>KOG2096|consensus
Probab=99.63 E-value=4.4e-15 Score=91.89 Aligned_cols=100 Identities=21% Similarity=0.272 Sum_probs=86.9
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC-
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRG- 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~- 79 (125)
|++++.|..|.+|+++ |+.++.+.... ..-+..++||+|++++.++-.--|++|.+--
T Consensus 202 imsas~dt~i~lw~lk-Gq~L~~idtnq--------------------~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~ 260 (420)
T KOG2096|consen 202 IMSASLDTKICLWDLK-GQLLQSIDTNQ--------------------SSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFT 260 (420)
T ss_pred EEEecCCCcEEEEecC-Cceeeeecccc--------------------ccccceeeCCCCcEEEEecCCCCceEEEEEec
Confidence 5789999999999998 88888887665 5667789999999999999888999999732
Q ss_pred --C-----ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 80 --S-----RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 80 --~-----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
+ ..+..+++|...|...+|+++...+++.+.||++++||..-
T Consensus 261 kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdV 309 (420)
T KOG2096|consen 261 KDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDV 309 (420)
T ss_pred cCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccc
Confidence 2 34667789999999999999999999999999999999753
No 118
>KOG0646|consensus
Probab=99.63 E-value=4.4e-15 Score=95.16 Aligned_cols=101 Identities=19% Similarity=0.378 Sum_probs=88.8
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC--
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRG-- 79 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~-- 79 (125)
+.|...+.|++|.+.+|..+..+..|- ..|+|+.|+-++.++++|+.||.|.+|++..
T Consensus 97 ~ag~i~g~lYlWelssG~LL~v~~aHY--------------------Q~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv 156 (476)
T KOG0646|consen 97 LAGTISGNLYLWELSSGILLNVLSAHY--------------------QSITCLKFSDDGSHIITGSKDGAVLVWLLTDLV 156 (476)
T ss_pred EeecccCcEEEEEeccccHHHHHHhhc--------------------cceeEEEEeCCCcEEEecCCCccEEEEEEEeec
Confidence 344588999999999999999998888 7889999999999999999999999999853
Q ss_pred -------CceeEEeCCCCCceeEEEEccC--CCeEEEeecCCeEEEEeCCCC
Q psy14458 80 -------SRPLQTFKPHTADVRSIRFSPS--AYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 80 -------~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~d~~i~~~~~~~~ 122 (125)
-+++..|..|.-.|+.+...+. ...++++|.|.++++||+..+
T Consensus 157 ~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g 208 (476)
T KOG0646|consen 157 SADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLG 208 (476)
T ss_pred ccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccc
Confidence 3578888899999999887664 468999999999999999865
No 119
>KOG1273|consensus
Probab=99.63 E-value=7.9e-15 Score=90.63 Aligned_cols=99 Identities=21% Similarity=0.423 Sum_probs=82.3
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
||.|+.||.|.|||+.+......+.+|. .+|++++||++|.+|++++.|..+.+||+..+
T Consensus 38 lAvGc~nG~vvI~D~~T~~iar~lsaH~--------------------~pi~sl~WS~dgr~LltsS~D~si~lwDl~~g 97 (405)
T KOG1273|consen 38 LAVGCANGRVVIYDFDTFRIARMLSAHV--------------------RPITSLCWSRDGRKLLTSSRDWSIKLWDLLKG 97 (405)
T ss_pred eeeeccCCcEEEEEccccchhhhhhccc--------------------cceeEEEecCCCCEeeeecCCceeEEEeccCC
Confidence 5899999999999999988777888887 78899999999999999999999999999999
Q ss_pred ceeEEeCCCCCceeEEEEccCC-CeEEEeecCCeEEEEeCC
Q psy14458 81 RPLQTFKPHTADVRSIRFSPSA-YYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~d~~i~~~~~~ 120 (125)
.+++.++ ...+|....|+|.. +..++.-.+..-.+-++.
T Consensus 98 s~l~rir-f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s 137 (405)
T KOG1273|consen 98 SPLKRIR-FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFS 137 (405)
T ss_pred CceeEEE-ccCccceeeeccccCCeEEEEEecCCcEEEEec
Confidence 9998888 78899999999943 444444444444554444
No 120
>KOG1332|consensus
Probab=99.63 E-value=2.5e-15 Score=89.87 Aligned_cols=122 Identities=17% Similarity=0.247 Sum_probs=96.2
Q ss_pred CeeecCCCeEEEEECCCCc--ceeeecCCCCCeEEEEecCccc---------------------------ccccCCCCCe
Q psy14458 1 MVSGHEDSSCVLYDIRGSR--PLQTFKPHTADVRSIHLDHYTT---------------------------EAGTRQGSPV 51 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~~~~~i 51 (125)
|++++.|++|.||.-.+++ .......|...+++++|.+... .....|...+
T Consensus 73 LAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~Gv 152 (299)
T KOG1332|consen 73 LASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGV 152 (299)
T ss_pred eeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhcccccc
Confidence 6899999999999977663 3445667888888888855321 1223667789
Q ss_pred EEEEECCC---C-----------CEEEEEeCCCcEEEEEcCCCc--eeEEeCCCCCceeEEEEccC----CCeEEEeecC
Q psy14458 52 SALCVDPS---G-----------RLMVSGHEDSSCVLYDIRGSR--PLQTFKPHTADVRSIRFSPS----AYYLLTGGYD 111 (125)
Q Consensus 52 ~~~~~~~~---~-----------~~~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~v~~~~~~~~----~~~~~~~~~d 111 (125)
++++|.|- | ..|++|+.|+.|+||+...++ ....+.+|...|+.++|.|. ...|++++.|
T Consensus 153 nsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqD 232 (299)
T KOG1332|consen 153 NSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQD 232 (299)
T ss_pred ceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCC
Confidence 99999985 3 459999999999999988753 33447899999999999994 3689999999
Q ss_pred CeEEEEeCCCC
Q psy14458 112 NKLVLTDLQGT 122 (125)
Q Consensus 112 ~~i~~~~~~~~ 122 (125)
|++.+|..+..
T Consensus 233 g~viIwt~~~e 243 (299)
T KOG1332|consen 233 GTVIIWTKDEE 243 (299)
T ss_pred CcEEEEEecCc
Confidence 99999987744
No 121
>KOG0301|consensus
Probab=99.63 E-value=5e-15 Score=98.82 Aligned_cols=116 Identities=23% Similarity=0.248 Sum_probs=96.4
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcc-------------------cccccCCCCCeEEEEECCCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYT-------------------TEAGTRQGSPVSALCVDPSGR 61 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~-------------------~~~~~~~~~~i~~~~~~~~~~ 61 (125)
+++|++|.++++|-. +++...+++|+.+|.++..-+.. ......|.+-|..+++-++.
T Consensus 115 ~iSgSWD~TakvW~~--~~l~~~l~gH~asVWAv~~l~e~~~vTgsaDKtIklWk~~~~l~tf~gHtD~VRgL~vl~~~- 191 (745)
T KOG0301|consen 115 LISGSWDSTAKVWRI--GELVYSLQGHTASVWAVASLPENTYVTGSADKTIKLWKGGTLLKTFSGHTDCVRGLAVLDDS- 191 (745)
T ss_pred eEecccccceEEecc--hhhhcccCCcchheeeeeecCCCcEEeccCcceeeeccCCchhhhhccchhheeeeEEecCC-
Confidence 578999999999995 55566688899988887753322 22334788899999998764
Q ss_pred EEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 62 LMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 62 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
.|+++++||.|++|++ +++.+..+.+|.+.|.++...+++..++++++|+++++|+..
T Consensus 192 ~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~ 249 (745)
T KOG0301|consen 192 HFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD 249 (745)
T ss_pred CeEeecCCceEEEEec-cCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC
Confidence 4788889999999998 889999999999999999988888999999999999999864
No 122
>KOG1539|consensus
Probab=99.62 E-value=4.8e-15 Score=100.63 Aligned_cols=100 Identities=21% Similarity=0.327 Sum_probs=89.3
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
++.+..|-.|+++|..+.+....|.+|. ..|++++|||+|+.+++++.|++|++||+.++
T Consensus 549 ~a~~~ddf~I~vvD~~t~kvvR~f~gh~--------------------nritd~~FS~DgrWlisasmD~tIr~wDlpt~ 608 (910)
T KOG1539|consen 549 LAIALDDFSIRVVDVVTRKVVREFWGHG--------------------NRITDMTFSPDGRWLISASMDSTIRTWDLPTG 608 (910)
T ss_pred hhhhcCceeEEEEEchhhhhhHHhhccc--------------------cceeeeEeCCCCcEEEEeecCCcEEEEeccCc
Confidence 4567888999999999988888899888 88999999999999999999999999999999
Q ss_pred ceeEEeCCCCCceeEEEEccCCCeEEEeecC-CeEEEEeCCC
Q psy14458 81 RPLQTFKPHTADVRSIRFSPSAYYLLTGGYD-NKLVLTDLQG 121 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d-~~i~~~~~~~ 121 (125)
.++-.+. -..++..+.|+|+|.++++...| .-|++|.-++
T Consensus 609 ~lID~~~-vd~~~~sls~SPngD~LAT~Hvd~~gIylWsNks 649 (910)
T KOG1539|consen 609 TLIDGLL-VDSPCTSLSFSPNGDFLATVHVDQNGIYLWSNKS 649 (910)
T ss_pred ceeeeEe-cCCcceeeEECCCCCEEEEEEecCceEEEEEchh
Confidence 9988776 56788899999999999999887 6699996543
No 123
>KOG0973|consensus
Probab=99.62 E-value=6.1e-15 Score=101.98 Aligned_cols=113 Identities=15% Similarity=0.274 Sum_probs=85.2
Q ss_pred Ceeec--CCCeEEEEECCCCc-ceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEc
Q psy14458 1 MVSGH--EDSSCVLYDIRGSR-PLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDI 77 (125)
Q Consensus 1 l~t~~--~d~~i~v~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~ 77 (125)
++||+ .|+.+.||+...-- ........ -+........|...++|+.|+|+|.+|++|++|..|.+|..
T Consensus 28 ~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~---------l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~ 98 (942)
T KOG0973|consen 28 FATGGQVLDGGIVIWSQDPVLDEKEEKNEN---------LPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWER 98 (942)
T ss_pred EecCCccccccceeeccccccchhhhhhcc---------cchhheeeccccCceeEEEECCCCCeEeeccCcceEEEeee
Confidence 57888 89999999875421 00000000 01112222334489999999999999999999999999997
Q ss_pred CC-------C-----------ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 78 RG-------S-----------RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 78 ~~-------~-----------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
.. + +....+.+|.+.|..+.|+|++.++++++.|++|.+||.++.
T Consensus 99 ~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF 161 (942)
T KOG0973|consen 99 AEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTF 161 (942)
T ss_pred cccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccc
Confidence 62 1 256677899999999999999999999999999999998875
No 124
>KOG1274|consensus
Probab=99.62 E-value=3.9e-14 Score=97.06 Aligned_cols=121 Identities=15% Similarity=0.286 Sum_probs=101.0
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccccccc------------------------------CCCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGT------------------------------RQGSP 50 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~------------------------------~~~~~ 50 (125)
++.|+.|-.|++-+.........+.+|..+|.++.+++..+..+. .....
T Consensus 111 iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i 190 (933)
T KOG1274|consen 111 IAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRI 190 (933)
T ss_pred EEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCCccccccccce
Confidence 478999999999999999999999999999999998764332221 12356
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeC--CCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 51 VSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFK--PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 51 i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
++.++|+|++..++..+.|+.|++|+....+....++ .+...+..+.|+|+|++|++++.||.|.|||+++
T Consensus 191 ~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t 263 (933)
T KOG1274|consen 191 CTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDT 263 (933)
T ss_pred eeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEeccc
Confidence 7889999998888888899999999988888777776 2344588999999999999999999999999985
No 125
>KOG0649|consensus
Probab=99.61 E-value=6.5e-14 Score=84.07 Aligned_cols=123 Identities=15% Similarity=0.191 Sum_probs=97.0
Q ss_pred CeeecCCCeEEEEECCCC----------cceeeecCCCCCeEEEEecCcccccc--------------------------
Q psy14458 1 MVSGHEDSSCVLYDIRGS----------RPLQTFKPHTADVRSIHLDHYTTEAG-------------------------- 44 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~----------~~~~~~~~~~~~i~~~~~~~~~~~~~-------------------------- 44 (125)
|+.|..+|.|-++.+.+. ..+..++.|.+||+.+.+........
T Consensus 25 l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d~~Lls~gdG~V~gw~W~E~~es~~~K~lwe~~ 104 (325)
T KOG0649|consen 25 LFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHDDFLLSGGDGLVYGWEWNEEEESLATKRLWEVK 104 (325)
T ss_pred EEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeeehhheeeccCceEEEeeehhhhhhccchhhhhhc
Confidence 578899999999988642 22344578999999998753111100
Q ss_pred ------cCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEe
Q psy14458 45 ------TRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTD 118 (125)
Q Consensus 45 ------~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~ 118 (125)
...-..|+.+-+.|..+-++++..|+.++-||+.+++....+++|...|+++.--.....+++|++||++++||
T Consensus 105 ~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd 184 (325)
T KOG0649|consen 105 IPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWD 184 (325)
T ss_pred CccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEe
Confidence 12225689999999887777777999999999999999999999999999998855555789999999999999
Q ss_pred CCCCC
Q psy14458 119 LQGTM 123 (125)
Q Consensus 119 ~~~~~ 123 (125)
.++..
T Consensus 185 ~kt~k 189 (325)
T KOG0649|consen 185 TKTQK 189 (325)
T ss_pred ccccc
Confidence 98864
No 126
>KOG1539|consensus
Probab=99.61 E-value=5.4e-15 Score=100.39 Aligned_cols=122 Identities=17% Similarity=0.296 Sum_probs=103.7
Q ss_pred eeecCCCeEEEEECCCCcceeee---cCCCCCeEEEEecCcccccc---------------------cCCCCCeEEEEEC
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTF---KPHTADVRSIHLDHYTTEAG---------------------TRQGSPVSALCVD 57 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~---------------------~~~~~~i~~~~~~ 57 (125)
+.|...|.|-+||+++|-....| ..|..+|+.+..++.+.... ...+..+.++..+
T Consensus 464 ~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~h 543 (910)
T KOG1539|consen 464 FIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYH 543 (910)
T ss_pred EEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeee
Confidence 45777899999999999887777 46888999998876542222 1344677888888
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 58 PSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 58 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.....++.+.+|-.|.++|..+.+.++.|.+|.+.++.++|+|||+++++++.|++|++||+-++.
T Consensus 544 r~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~ 609 (910)
T KOG1539|consen 544 RVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGT 609 (910)
T ss_pred ehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcc
Confidence 888889999999999999999999999999999999999999999999999999999999998764
No 127
>KOG0299|consensus
Probab=99.61 E-value=1.5e-14 Score=92.67 Aligned_cols=120 Identities=17% Similarity=0.242 Sum_probs=100.2
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCc----------------------ccccccCCCCCeEEEEECC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHY----------------------TTEAGTRQGSPVSALCVDP 58 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~----------------------~~~~~~~~~~~i~~~~~~~ 58 (125)
|++|+.|..|.||+.++.++++.+.+|.+.|.+++|... .+.....|...|..+....
T Consensus 217 latgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL~ 296 (479)
T KOG0299|consen 217 LATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDALS 296 (479)
T ss_pred EEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeechhc
Confidence 589999999999999999999999999999999998531 1233347888999998888
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
.+..+-.|..|.++++|++.. +....+.++.+.+-|++|- +..++++|+.+|.|.+|++...
T Consensus 297 reR~vtVGgrDrT~rlwKi~e-esqlifrg~~~sidcv~~I-n~~HfvsGSdnG~IaLWs~~KK 358 (479)
T KOG0299|consen 297 RERCVTVGGRDRTVRLWKIPE-ESQLIFRGGEGSIDCVAFI-NDEHFVSGSDNGSIALWSLLKK 358 (479)
T ss_pred ccceEEeccccceeEEEeccc-cceeeeeCCCCCeeeEEEe-cccceeeccCCceEEEeeeccc
Confidence 888888888999999999944 3334477888889999886 5579999999999999998654
No 128
>KOG0288|consensus
Probab=99.61 E-value=1.7e-14 Score=91.56 Aligned_cols=75 Identities=24% Similarity=0.365 Sum_probs=65.1
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCC----CceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 48 GSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHT----ADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 48 ~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+..|+++..++++..+.+.+.|.++.+.|+++.+....+.+.. ...+.+.|+|++.++++||.||.+++|++.++
T Consensus 341 gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tg 419 (459)
T KOG0288|consen 341 GGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTG 419 (459)
T ss_pred CcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCc
Confidence 3689999999999999999999999999999988777776422 23678999999999999999999999999876
No 129
>KOG2048|consensus
Probab=99.60 E-value=4.5e-14 Score=94.05 Aligned_cols=103 Identities=13% Similarity=0.257 Sum_probs=90.1
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
|++.+-+|+|.-||+.++++...+.... ..|.+++.+|.+..++.||+||.++.++...+
T Consensus 83 LFS~g~sg~i~EwDl~~lk~~~~~d~~g--------------------g~IWsiai~p~~~~l~IgcddGvl~~~s~~p~ 142 (691)
T KOG2048|consen 83 LFSSGLSGSITEWDLHTLKQKYNIDSNG--------------------GAIWSIAINPENTILAIGCDDGVLYDFSIGPD 142 (691)
T ss_pred EEeecCCceEEEEecccCceeEEecCCC--------------------cceeEEEeCCccceEEeecCCceEEEEecCCc
Confidence 5788999999999999999999888766 78899999999999999999998888888776
Q ss_pred ceeE--EeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 81 RPLQ--TFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 81 ~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+... .+...++.|.++.|+|++..++.|+.||.|++||..++.
T Consensus 143 ~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~ 187 (691)
T KOG2048|consen 143 KITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQ 187 (691)
T ss_pred eEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCCCc
Confidence 6443 344567899999999999999999999999999998764
No 130
>KOG1036|consensus
Probab=99.60 E-value=2.7e-14 Score=87.60 Aligned_cols=122 Identities=21% Similarity=0.259 Sum_probs=90.0
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccc----------------------cCCCCCeEEEEECC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAG----------------------TRQGSPVSALCVDP 58 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----------------------~~~~~~i~~~~~~~ 58 (125)
+++|++|++|++||.+.......+. ....|.++...+..+... ...+-.+.|+++.|
T Consensus 109 vIsgsWD~~ik~wD~R~~~~~~~~d-~~kkVy~~~v~g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~p 187 (323)
T KOG1036|consen 109 VISGSWDKTIKFWDPRNKVVVGTFD-QGKKVYCMDVSGNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVP 187 (323)
T ss_pred EEEcccCccEEEEeccccccccccc-cCceEEEEeccCCEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEEec
Confidence 5799999999999999754444444 333666666544332221 12345789999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCC----ceeEEeCCCCC---------ceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGS----RPLQTFKPHTA---------DVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~----~~~~~~~~~~~---------~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
++.-++.++-||.|.+=.+... +.-..|+.|.. +|++++|+|-...+++|+.||.|.+||+.++.
T Consensus 188 n~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rK 265 (323)
T KOG1036|consen 188 NGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRK 265 (323)
T ss_pred CCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccceEEecCCCceEEEccCcchh
Confidence 9888999999999876544443 44555666642 68999999998999999999999999998764
No 131
>KOG4378|consensus
Probab=99.60 E-value=1.2e-14 Score=94.49 Aligned_cols=124 Identities=23% Similarity=0.415 Sum_probs=87.7
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccc------------------------------------
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAG------------------------------------ 44 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~------------------------------------ 44 (125)
+++|+..+.|+|||++...+...+++|...|+.+.++......+
T Consensus 94 ~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys 173 (673)
T KOG4378|consen 94 EISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYS 173 (673)
T ss_pred eeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEeecc
Confidence 46899999999999997667777888988888887643111110
Q ss_pred -------------------------------cCCCCCeEEEEECCCC-CEEEEEeCCCcEEEEEcCCCceeEEeCCCCCc
Q psy14458 45 -------------------------------TRQGSPVSALCVDPSG-RLMVSGHEDSSCVLYDIRGSRPLQTFKPHTAD 92 (125)
Q Consensus 45 -------------------------------~~~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~ 92 (125)
..|..+...|||+|.. .++++.+.|..|++||.+.......+. ...+
T Consensus 174 ~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~-y~~P 252 (673)
T KOG4378|consen 174 PSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLT-YSHP 252 (673)
T ss_pred cccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccceee-ecCC
Confidence 1344555566666644 344555666666666665444333333 4567
Q ss_pred eeEEEEccCCCeEEEeecCCeEEEEeCCCCCCC
Q psy14458 93 VRSIRFSPSAYYLLTGGYDNKLVLTDLQGTMRP 125 (125)
Q Consensus 93 v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~ 125 (125)
...++|.++|.+|+.|+..|.|..||+|....|
T Consensus 253 lstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~P 285 (673)
T KOG4378|consen 253 LSTVAFSECGTYLCAGNSKGELIAYDMRSTKAP 285 (673)
T ss_pred cceeeecCCceEEEeecCCceEEEEecccCCCC
Confidence 889999999999999999999999999987766
No 132
>KOG0301|consensus
Probab=99.60 E-value=1.4e-14 Score=96.75 Aligned_cols=117 Identities=26% Similarity=0.364 Sum_probs=100.9
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCc-------------------ccccccCCCCCeEEEEECCCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHY-------------------TTEAGTRQGSPVSALCVDPSGR 61 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~-------------------~~~~~~~~~~~i~~~~~~~~~~ 61 (125)
+++|+.|..|.+|.+....++..+++|...|.++..... ......+|+..|..++.-|++
T Consensus 74 l~~g~~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~~iSgSWD~TakvW~~~~l~~~l~gH~asVWAv~~l~e~- 152 (745)
T KOG0301|consen 74 LVVGGMDTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGTLISGSWDSTAKVWRIGELVYSLQGHTASVWAVASLPEN- 152 (745)
T ss_pred eEeecccceEEEEecCCCCchhhhhccccceeeeecCCcCceEecccccceEEecchhhhcccCCcchheeeeeecCCC-
Confidence 468999999999999999999999999999988874322 123346889999999999988
Q ss_pred EEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 62 LMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 62 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
.+++|+.|.+|++|.- ++.+.+|.+|..-|+.+++-|+ ..+++++.||.|+.|++.+
T Consensus 153 ~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~-~~flScsNDg~Ir~w~~~g 209 (745)
T KOG0301|consen 153 TYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDD-SHFLSCSNDGSIRLWDLDG 209 (745)
T ss_pred cEEeccCcceeeeccC--CchhhhhccchhheeeeEEecC-CCeEeecCCceEEEEeccC
Confidence 8999999999999964 8889999999999999999876 4789999999999999944
No 133
>KOG1274|consensus
Probab=99.60 E-value=3.6e-14 Score=97.21 Aligned_cols=103 Identities=22% Similarity=0.449 Sum_probs=91.9
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
|++|+.++.|.+|....+..-..+...+ .++.+++++-+|++++.|+.|-.|++.+..+.
T Consensus 69 f~~~s~~~tv~~y~fps~~~~~iL~Rft--------------------lp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~ 128 (933)
T KOG1274|consen 69 FLTGSEQNTVLRYKFPSGEEDTILARFT--------------------LPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDS 128 (933)
T ss_pred eEEeeccceEEEeeCCCCCccceeeeee--------------------ccceEEEEecCCcEEEeecCceeEEEEecccc
Confidence 5789999999999988776654444444 67889999999999999999999999999999
Q ss_pred ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 81 RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.....+++|+++|.++.|+|+++++++.+.||.+++||++++.
T Consensus 129 s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~ 171 (933)
T KOG1274|consen 129 SQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGI 171 (933)
T ss_pred chheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccch
Confidence 9999999999999999999999999999999999999998763
No 134
>KOG2394|consensus
Probab=99.60 E-value=6.2e-15 Score=96.26 Aligned_cols=80 Identities=20% Similarity=0.377 Sum_probs=73.1
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
||+.++||.++|||..+.+.+..++..- ....|++|||||+++++|++|-.|.||.+..+
T Consensus 305 LA~VSqDGfLRvF~fdt~eLlg~mkSYF--------------------GGLLCvcWSPDGKyIvtGGEDDLVtVwSf~er 364 (636)
T KOG2394|consen 305 LATVSQDGFLRIFDFDTQELLGVMKSYF--------------------GGLLCVCWSPDGKYIVTGGEDDLVTVWSFEER 364 (636)
T ss_pred EEEEecCceEEEeeccHHHHHHHHHhhc--------------------cceEEEEEcCCccEEEecCCcceEEEEEeccc
Confidence 5889999999999999988887777655 67899999999999999999999999999999
Q ss_pred ceeEEeCCCCCceeEEEEcc
Q psy14458 81 RPLQTFKPHTADVRSIRFSP 100 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~ 100 (125)
+.+..-.+|+.+|+.++|.|
T Consensus 365 RVVARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 365 RVVARGQGHKSWVSVVAFDP 384 (636)
T ss_pred eEEEeccccccceeeEeecc
Confidence 99988889999999999983
No 135
>KOG4328|consensus
Probab=99.59 E-value=5.3e-14 Score=90.27 Aligned_cols=120 Identities=22% Similarity=0.371 Sum_probs=91.3
Q ss_pred CeeecCCCeEEEEECCCCc----ceeeecCCCCCeEEEEecCcc------------------------------------
Q psy14458 1 MVSGHEDSSCVLYDIRGSR----PLQTFKPHTADVRSIHLDHYT------------------------------------ 40 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~----~~~~~~~~~~~i~~~~~~~~~------------------------------------ 40 (125)
+++|..-|.|-+||+.+.. .+..+..|..+|..+.|.+..
T Consensus 203 va~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~f 282 (498)
T KOG4328|consen 203 VAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWF 282 (498)
T ss_pred EEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeeeeeecchhhHHHhhcCccceee
Confidence 4788889999999996332 345566788888888774310
Q ss_pred --------------------------------cccccCCCCCeEEEEECCCC-CEEEEEeCCCcEEEEEcCCC--c--ee
Q psy14458 41 --------------------------------TEAGTRQGSPVSALCVDPSG-RLMVSGHEDSSCVLYDIRGS--R--PL 83 (125)
Q Consensus 41 --------------------------------~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~d~~~~--~--~~ 83 (125)
.....-|...|+.++++|.. .++++++.|++++|||++.. + ++
T Consensus 283 s~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~ 362 (498)
T KOG4328|consen 283 SSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPF 362 (498)
T ss_pred eeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcc
Confidence 00011345689999999975 67899999999999999863 2 23
Q ss_pred EEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 84 QTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 84 ~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
...-.|...|++..|+|.+-.+++.+.|..|++||..
T Consensus 363 lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss 399 (498)
T KOG4328|consen 363 LSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSS 399 (498)
T ss_pred eecccccceeeeeEEcCCCCceEeeccCCceEEeecc
Confidence 4444699999999999977679999999999999974
No 136
>KOG1273|consensus
Probab=99.59 E-value=8.9e-15 Score=90.41 Aligned_cols=73 Identities=22% Similarity=0.262 Sum_probs=69.5
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 51 VSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 51 i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
..|+.|++-|.+++.|+.+|.|-+||..+......+.+|..+|.+++|++||+.|+++|.|..+.+||+..+.
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs 98 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGS 98 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCC
Confidence 6899999999999999999999999999988888889999999999999999999999999999999998775
No 137
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.58 E-value=1.2e-13 Score=82.23 Aligned_cols=72 Identities=26% Similarity=0.532 Sum_probs=59.7
Q ss_pred CCeEEEEECCCCCEEEEEeC---CCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeec------CCeEEEEeC
Q psy14458 49 SPVSALCVDPSGRLMVSGHE---DSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGY------DNKLVLTDL 119 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~---~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~------d~~i~~~~~ 119 (125)
..+..+.|+|+|++++.++. .|.+.+||.++.+.+..+. |.. +..++|+|||++++++.. |..+++|+.
T Consensus 101 ~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~-~~~-~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~ 178 (194)
T PF08662_consen 101 QPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE-HSD-ATDVEWSPDGRYLATATTSPRLRVDNGFKIWSF 178 (194)
T ss_pred CCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccc-cCc-EEEEEEcCCCCEEEEEEeccceeccccEEEEEe
Confidence 56788999999999998864 3669999999888887776 433 678999999999998764 788999998
Q ss_pred CCC
Q psy14458 120 QGT 122 (125)
Q Consensus 120 ~~~ 122 (125)
.+.
T Consensus 179 ~G~ 181 (194)
T PF08662_consen 179 QGR 181 (194)
T ss_pred cCe
Confidence 754
No 138
>KOG0647|consensus
Probab=99.58 E-value=2.9e-14 Score=87.51 Aligned_cols=122 Identities=21% Similarity=0.252 Sum_probs=89.4
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEe---------cC-----------ccc--ccccCCCCCeEEEEECC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHL---------DH-----------YTT--EAGTRQGSPVSALCVDP 58 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~---------~~-----------~~~--~~~~~~~~~i~~~~~~~ 58 (125)
|+||++|.+|+.||.+...++..+.- ...+++... .+ ..+ ......+..+.|++..+
T Consensus 130 l~TGSWDKTlKfWD~R~~~pv~t~~L-PeRvYa~Dv~~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~ 208 (347)
T KOG0647|consen 130 LVTGSWDKTLKFWDTRSSNPVATLQL-PERVYAADVLYPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQ 208 (347)
T ss_pred eEecccccceeecccCCCCeeeeeec-cceeeehhccCceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEe
Confidence 58999999999999998877766552 222222221 11 111 11123446789999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCC--ceeEEeCCCCC---------ceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGS--RPLQTFKPHTA---------DVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~--~~~~~~~~~~~---------~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+....+.|+-+|.+-+..+..+ +.-..|+.|+. .|++++|+|....|++.+.||++.+||-+.++
T Consensus 209 d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~ 284 (347)
T KOG0647|consen 209 DKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDART 284 (347)
T ss_pred cCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecchhhh
Confidence 9888899999999999888765 44555665652 47889999998999999999999999987654
No 139
>KOG0643|consensus
Probab=99.58 E-value=9.8e-14 Score=84.11 Aligned_cols=123 Identities=20% Similarity=0.282 Sum_probs=97.9
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccc---------------------ccccCCCCCeEEEEECCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTT---------------------EAGTRQGSPVSALCVDPS 59 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~---------------------~~~~~~~~~i~~~~~~~~ 59 (125)
|++++.|.++.+|-..+|+.+.++.+|++.|.++..+.... ......+.++..+.|++.
T Consensus 25 lFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~ 104 (327)
T KOG0643|consen 25 LFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFG 104 (327)
T ss_pred EEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEeecCCeeEEEeeccC
Confidence 57999999999999989999999999999998887653221 111234467888888888
Q ss_pred CCEEEEEe-----CCCcEEEEEcCC-------CceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 60 GRLMVSGH-----EDSSCVLYDIRG-------SRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 60 ~~~~~~~~-----~~~~i~~~d~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+++++... ..+.|.++|++. .++...+..+...++.+-|.|-+++|++|..||.|..||.+++.
T Consensus 105 gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~ 180 (327)
T KOG0643|consen 105 GNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGK 180 (327)
T ss_pred CcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCc
Confidence 88776654 336688888873 45566677777889999999999999999999999999999864
No 140
>KOG0299|consensus
Probab=99.58 E-value=3e-14 Score=91.30 Aligned_cols=118 Identities=16% Similarity=0.267 Sum_probs=92.5
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCc
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSR 81 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 81 (125)
++++.|++|.-|++.+++...-+-... .|-.....+....- ..|...+.+++.+++++++++|..|..|.||+..+.+
T Consensus 158 fsask~g~i~kw~v~tgk~~~~i~~~~-ev~k~~~~~~k~~r-~~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t~e 235 (479)
T KOG0299|consen 158 FSASKDGTILKWDVLTGKKDRYIIERD-EVLKSHGNPLKESR-KGHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDTLE 235 (479)
T ss_pred eecCCCcceeeeehhcCcccccccccc-hhhhhccCCCCccc-ccccceeEEEEEcCCCcEEEecCCCceEEEecCcccc
Confidence 678999999999999887552221111 11110111111111 2567889999999999999999999999999999999
Q ss_pred eeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 82 PLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 82 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
.+..+..|.+.|.+++|-....-+++++.|+.+++|+++.
T Consensus 236 hv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~ 275 (479)
T KOG0299|consen 236 HVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQ 275 (479)
T ss_pred hhhcccccccceeeeeeecCccceeeeecCCceEEEehhH
Confidence 9999999999999999988888999999999999999864
No 141
>KOG1007|consensus
Probab=99.57 E-value=2.9e-14 Score=87.25 Aligned_cols=100 Identities=24% Similarity=0.431 Sum_probs=83.9
Q ss_pred eecCCCeEEEEECCCCcceeeec-CCCCCeEEEEecCcccccccCCCCCeEEEEECCCC-CEEEEEeCCCcEEEEEcCC-
Q psy14458 3 SGHEDSSCVLYDIRGSRPLQTFK-PHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSG-RLMVSGHEDSSCVLYDIRG- 79 (125)
Q Consensus 3 t~~~d~~i~v~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~d~~~- 79 (125)
....|+++..||+++.++...+. .|. ..+..+.|+|+. .+++++++||.|++||.+.
T Consensus 188 ~tt~d~tl~~~D~RT~~~~~sI~dAHg--------------------q~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~t 247 (370)
T KOG1007|consen 188 ATTSDSTLQFWDLRTMKKNNSIEDAHG--------------------QRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKT 247 (370)
T ss_pred EEeCCCcEEEEEccchhhhcchhhhhc--------------------ceeeeccCCCCceEEEEEcCCCccEEEEeccCC
Confidence 34568889999999888776665 243 788899999975 6789999999999999987
Q ss_pred CceeEEeCCCCCceeEEEEcc-CCCeEEEeecCCeEEEEeCCCC
Q psy14458 80 SRPLQTFKPHTADVRSIRFSP-SAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 80 ~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
..++.++..|..+|.+++|+| ..+++++++.|..+.+|...+-
T Consensus 248 k~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~sv 291 (370)
T KOG1007|consen 248 KFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSV 291 (370)
T ss_pred CccccccCCCceEEEEEEecCccceEEEecCCCceeEEEecccc
Confidence 467888999999999999999 5689999999999999987643
No 142
>KOG0278|consensus
Probab=99.57 E-value=5.3e-15 Score=88.95 Aligned_cols=123 Identities=19% Similarity=0.300 Sum_probs=105.3
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccc---------------------cCCCCCeEEEEECCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAG---------------------TRQGSPVSALCVDPS 59 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---------------------~~~~~~i~~~~~~~~ 59 (125)
|++++.|+.-.+-+-+++.=+.+|.+|.+.|.....+....... ..|...|..++|+.+
T Consensus 32 lisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelhsf~hkhivk~~af~~d 111 (334)
T KOG0278|consen 32 LISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELHSFEHKHIVKAVAFSQD 111 (334)
T ss_pred EEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhhhhhhheeeeEEeccc
Confidence 57889999999888888888999999999998888765332222 367788999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCc-eeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 60 GRLMVSGHEDSSCVLYDIRGSR-PLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 60 ~~~~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.+++++|+.+..+++||+...+ +...+.+|.+.|..+-|....+.|++.+.|++|++||.+++.
T Consensus 112 s~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt 176 (334)
T KOG0278|consen 112 SNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGT 176 (334)
T ss_pred chhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCc
Confidence 9999999999999999997653 566788999999999999888888888999999999999875
No 143
>KOG0270|consensus
Probab=99.56 E-value=9.1e-15 Score=93.29 Aligned_cols=119 Identities=19% Similarity=0.370 Sum_probs=87.9
Q ss_pred CeeecCCCeEEEEECCCCcce---eeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCC-CCEEEEEeCCCcEEEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPL---QTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPS-GRLMVSGHEDSSCVLYD 76 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~---~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~i~~~d 76 (125)
+|.|.-|..|.|||+.-...+ ..+....... ..-.+..-.....|+..+..++|+.. .+.|++|+.|.+|.+||
T Consensus 195 vAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~--~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD 272 (463)
T KOG0270|consen 195 VAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKK--KKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKLWD 272 (463)
T ss_pred EEEeccCceeEEeccccccccccceeechhhhhh--hhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEEEE
Confidence 477889999999999753221 1111000000 00001112223456677888888875 47899999999999999
Q ss_pred cCCCceeEEeCCCCCceeEEEEcc-CCCeEEEeecCCeEEEEeCCC
Q psy14458 77 IRGSRPLQTFKPHTADVRSIRFSP-SAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 77 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~i~~~~~~~ 121 (125)
+.++++..++..|.++|.++.|+| ...++++|+.|+++.+.|+|.
T Consensus 273 ~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~ 318 (463)
T KOG0270|consen 273 VDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRD 318 (463)
T ss_pred cCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccC
Confidence 999999999999999999999999 678999999999999999984
No 144
>KOG1009|consensus
Probab=99.56 E-value=4.3e-14 Score=89.52 Aligned_cols=112 Identities=19% Similarity=0.352 Sum_probs=84.5
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcC--
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIR-- 78 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~-- 78 (125)
|+||+.|..|++|-+..+..-..- ..+. ....+..|...++++.|+|+|+.+++|+++|.+.+|-..
T Consensus 29 laT~G~D~~iriW~v~r~~~~~~~-------~~V~----y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~ 97 (434)
T KOG1009|consen 29 LATAGGDKDIRIWKVNRSEPGGGD-------MKVE----YLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDV 97 (434)
T ss_pred eecccCccceeeeeeeecCCCCCc-------eeEE----EeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCc
Confidence 589999999999988654332100 0000 001122344889999999999999999999999999865
Q ss_pred ------C-----C---ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 79 ------G-----S---RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 79 ------~-----~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+ . .......+|...+..++|+|++.++++++.|..+++||+..++
T Consensus 98 ~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~ 156 (434)
T KOG1009|consen 98 RIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQ 156 (434)
T ss_pred CCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccce
Confidence 2 1 1233455788999999999999999999999999999998875
No 145
>KOG0303|consensus
Probab=99.56 E-value=8.4e-14 Score=88.20 Aligned_cols=104 Identities=18% Similarity=0.269 Sum_probs=88.2
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
|++++.|+.|.+||+.+++.+..+. |. ..|.+++|+.+|.++++.+.|..|+|||.+++
T Consensus 147 Llsag~Dn~v~iWnv~tgeali~l~-hp--------------------d~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~ 205 (472)
T KOG0303|consen 147 LLSAGSDNTVSIWNVGTGEALITLD-HP--------------------DMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRG 205 (472)
T ss_pred HhhccCCceEEEEeccCCceeeecC-CC--------------------CeEEEEEeccCCceeeeecccceeEEEcCCCC
Confidence 5789999999999999999888877 76 78999999999999999999999999999999
Q ss_pred ceeEEeCCCCCc-eeEEEEccCCCeEEEee---cCCeEEEEeCCCCCCC
Q psy14458 81 RPLQTFKPHTAD-VRSIRFSPSAYYLLTGG---YDNKLVLTDLQGTMRP 125 (125)
Q Consensus 81 ~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~---~d~~i~~~~~~~~~~~ 125 (125)
+.+..-.+|.+. -..+-|-.++.++.+|- .++.+-+||..+...|
T Consensus 206 ~~v~e~~~heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~eP 254 (472)
T KOG0303|consen 206 TVVSEGVAHEGAKPARAIFLASGKIFTTGFSRMSERQIALWDPNNLEEP 254 (472)
T ss_pred cEeeecccccCCCcceeEEeccCceeeeccccccccceeccCcccccCc
Confidence 999888878753 34566777888666653 4888999998776654
No 146
>KOG1188|consensus
Probab=99.55 E-value=6.5e-14 Score=87.13 Aligned_cols=122 Identities=25% Similarity=0.434 Sum_probs=86.2
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcc----c-----------------------ccccCCCCCeEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYT----T-----------------------EAGTRQGSPVSA 53 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~----~-----------------------~~~~~~~~~i~~ 53 (125)
++++...|+|++||..+++.+..|+++...+..+.|.... . ......+.+..|
T Consensus 43 vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ 122 (376)
T KOG1188|consen 43 VAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFIC 122 (376)
T ss_pred EEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcceE
Confidence 4678888999999999999999998887666555553210 0 000111234555
Q ss_pred EEECCCCCEEEEEe----CCCcEEEEEcCCCce-eEEe-CCCCCceeEEEEcc-CCCeEEEeecCCeEEEEeCCCC
Q psy14458 54 LCVDPSGRLMVSGH----EDSSCVLYDIRGSRP-LQTF-KPHTADVRSIRFSP-SAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 54 ~~~~~~~~~~~~~~----~~~~i~~~d~~~~~~-~~~~-~~~~~~v~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
++..-....+++|. .+-.|.+||++..+. +..+ ..|...|++++|+| +.+++++||.||-+.++|+...
T Consensus 123 ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d 198 (376)
T KOG1188|consen 123 LDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKD 198 (376)
T ss_pred eeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCC
Confidence 55554556666664 445677888877554 4443 47999999999999 6789999999999999998654
No 147
>KOG1445|consensus
Probab=99.55 E-value=6.5e-14 Score=93.61 Aligned_cols=111 Identities=16% Similarity=0.238 Sum_probs=88.5
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
|+||+.|..|+||-+..+... .+..... ......-.+.++.|+|...-+......|.+++||+.++
T Consensus 95 LAT~S~D~~VKiW~lp~g~~q-~LSape~-------------~~g~~~~~vE~l~fHpTaDgil~s~a~g~v~i~D~stq 160 (1012)
T KOG1445|consen 95 LATCSRDEPVKIWKLPRGHSQ-KLSAPEI-------------DVGGGNVIVECLRFHPTADGILASGAHGSVYITDISTQ 160 (1012)
T ss_pred hhcccCCCeeEEEecCCCccc-ccCCcce-------------eecCCceEEEEeecccCcCceEEeccCceEEEEEcccC
Confidence 689999999999999743221 1111100 00011156889999998766666668999999999999
Q ss_pred ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCCCC
Q psy14458 81 RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTMRP 125 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~ 125 (125)
+.+.++.+|...|.+..|+.||.++++.+.|+.|++||.+..+.|
T Consensus 161 k~~~el~~h~d~vQSa~WseDG~llatscKdkqirifDPRa~~~p 205 (1012)
T KOG1445|consen 161 KTAVELSGHTDKVQSADWSEDGKLLATSCKDKQIRIFDPRASMEP 205 (1012)
T ss_pred ceeecccCCchhhhccccccCCceEeeecCCcceEEeCCccCCCc
Confidence 999999999999999999999999999999999999999988765
No 148
>KOG1408|consensus
Probab=99.55 E-value=3.6e-13 Score=91.09 Aligned_cols=123 Identities=24% Similarity=0.426 Sum_probs=102.0
Q ss_pred CeeecCCCeEEEEECCCC-cceeeecCCCCCeEEEEecCcc--cccc---------------------------cCCCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGS-RPLQTFKPHTADVRSIHLDHYT--TEAG---------------------------TRQGSP 50 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~~--~~~~---------------------------~~~~~~ 50 (125)
|++++.|..|+|||+... .+++++.+|...|+++.|.... ..+. ......
T Consensus 519 LASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktT 598 (1080)
T KOG1408|consen 519 LASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTT 598 (1080)
T ss_pred hhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccce
Confidence 689999999999999654 5678889999999999985311 0000 012256
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCC---CCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 51 VSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKP---HTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 51 i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+..|++.|+.+++++++.|..|+||++..++....|++ |++....+...|.|.++++.+.|+++.++|.-++.
T Consensus 599 lYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgE 674 (1080)
T KOG1408|consen 599 LYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGE 674 (1080)
T ss_pred EEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccch
Confidence 89999999999999999999999999999999999984 55667789999999999999999999999987663
No 149
>KOG0290|consensus
Probab=99.55 E-value=2.4e-13 Score=83.32 Aligned_cols=104 Identities=24% Similarity=0.397 Sum_probs=74.3
Q ss_pred CeeecCCCeEEEEECCCCcc---eeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCC-CEEEEEeCCCcEEEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRP---LQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSG-RLMVSGHEDSSCVLYD 76 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~d 76 (125)
+.+++-|.+..|||+.++.. ...+-.|. +.|..++|...+ ..|++.+.||.+++||
T Consensus 166 igtSSiDTTCTiWdie~~~~~~vkTQLIAHD--------------------KEV~DIaf~~~s~~~FASvgaDGSvRmFD 225 (364)
T KOG0290|consen 166 IGTSSIDTTCTIWDIETGVSGTVKTQLIAHD--------------------KEVYDIAFLKGSRDVFASVGADGSVRMFD 225 (364)
T ss_pred eEeecccCeEEEEEEeeccccceeeEEEecC--------------------cceeEEEeccCccceEEEecCCCcEEEEE
Confidence 35788899999999988733 33344577 455555555533 4555555666666666
Q ss_pred cC-----------------------------------------------C-CceeEEeCCCCCceeEEEEcc-CCCeEEE
Q psy14458 77 IR-----------------------------------------------G-SRPLQTFKPHTADVRSIRFSP-SAYYLLT 107 (125)
Q Consensus 77 ~~-----------------------------------------------~-~~~~~~~~~~~~~v~~~~~~~-~~~~~~~ 107 (125)
++ . ..++..++.|.+.|+.++|.| ...+|++
T Consensus 226 LR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hict 305 (364)
T KOG0290|consen 226 LRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICT 305 (364)
T ss_pred ecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeee
Confidence 54 3 235566778999999999999 5689999
Q ss_pred eecCCeEEEEeCCCCCC
Q psy14458 108 GGYDNKLVLTDLQGTMR 124 (125)
Q Consensus 108 ~~~d~~i~~~~~~~~~~ 124 (125)
++.|....+||++...+
T Consensus 306 aGDD~qaliWDl~q~~~ 322 (364)
T KOG0290|consen 306 AGDDCQALIWDLQQMPR 322 (364)
T ss_pred cCCcceEEEEecccccc
Confidence 99999999999986543
No 150
>KOG0642|consensus
Probab=99.54 E-value=7.7e-14 Score=91.38 Aligned_cols=102 Identities=23% Similarity=0.338 Sum_probs=84.6
Q ss_pred CeeecCCCeEEEEECCC--------CcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcE
Q psy14458 1 MVSGHEDSSCVLYDIRG--------SRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSC 72 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~--------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i 72 (125)
|++++.|+.+++|++.. -+++.+|++|. .+|.|+++.+++..+++|+.||+|
T Consensus 309 lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~--------------------gPVl~v~v~~n~~~~ysgg~Dg~I 368 (577)
T KOG0642|consen 309 LITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHE--------------------GPVLCVVVPSNGEHCYSGGIDGTI 368 (577)
T ss_pred EEEeccccchhhhhhcccCCccccceeeeEEEeccc--------------------CceEEEEecCCceEEEeeccCcee
Confidence 58999999999999932 13456666676 788999999999999999999999
Q ss_pred EEEEcCCC----------ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 73 VLYDIRGS----------RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 73 ~~~d~~~~----------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+.|++... .....+.+|...|+.+.+++....|++++.||++++|+....
T Consensus 369 ~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~ 428 (577)
T KOG0642|consen 369 RCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEE 428 (577)
T ss_pred eeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCc
Confidence 99965421 234456789999999999998889999999999999987644
No 151
>KOG2394|consensus
Probab=99.54 E-value=7.3e-14 Score=91.38 Aligned_cols=74 Identities=18% Similarity=0.398 Sum_probs=69.1
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
..|..++|+|+|.+|++.+.||.++|+|..+.+.+..++..-+...|++|+|||++|++|++|.-+.||.+..+
T Consensus 291 g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~er 364 (636)
T KOG2394|consen 291 GSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEER 364 (636)
T ss_pred ccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccc
Confidence 58999999999999999999999999999999988888888889999999999999999999999999988643
No 152
>KOG2445|consensus
Probab=99.53 E-value=1.9e-13 Score=84.18 Aligned_cols=118 Identities=11% Similarity=0.226 Sum_probs=89.7
Q ss_pred CeeecCCCeEEEEECCCC------cceeeec-------CCCCCeEEEEecCcc---------------------------
Q psy14458 1 MVSGHEDSSCVLYDIRGS------RPLQTFK-------PHTADVRSIHLDHYT--------------------------- 40 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~------~~~~~~~-------~~~~~i~~~~~~~~~--------------------------- 40 (125)
|++++.||.+|||++... +....++ .+..+..++.|++..
T Consensus 129 lA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e 208 (361)
T KOG2445|consen 129 LAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNE 208 (361)
T ss_pred EEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecC
Confidence 588999999999987542 2222232 355677788876311
Q ss_pred -------cccccCCCCCeEEEEECCC----CCEEEEEeCCCcEEEEEcCCC--------------------ceeEEeCCC
Q psy14458 41 -------TEAGTRQGSPVSALCVDPS----GRLMVSGHEDSSCVLYDIRGS--------------------RPLQTFKPH 89 (125)
Q Consensus 41 -------~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~i~~~d~~~~--------------------~~~~~~~~~ 89 (125)
......++.+|+.++|.|+ ..++++++.|| |+||.++.. +.+..+..|
T Consensus 209 ~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H 287 (361)
T KOG2445|consen 209 NGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDH 287 (361)
T ss_pred CcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCC
Confidence 1222367789999999996 36799999999 999998730 245557789
Q ss_pred CCceeEEEEccCCCeEEEeecCCeEEEEeC
Q psy14458 90 TADVRSIRFSPSAYYLLTGGYDNKLVLTDL 119 (125)
Q Consensus 90 ~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~ 119 (125)
+++|..++|+-.|..|.+.+.||.+++|-.
T Consensus 288 ~~~VWrv~wNmtGtiLsStGdDG~VRLWka 317 (361)
T KOG2445|consen 288 NGEVWRVRWNMTGTILSSTGDDGCVRLWKA 317 (361)
T ss_pred CCceEEEEEeeeeeEEeecCCCceeeehhh
Confidence 999999999999999999999999999953
No 153
>KOG0321|consensus
Probab=99.53 E-value=6.2e-14 Score=93.12 Aligned_cols=103 Identities=23% Similarity=0.372 Sum_probs=78.1
Q ss_pred CeeecCCCeEEEEECCCCcceee--ecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCC-CEEEEEeCCCcEEEEEc
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQT--FKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSG-RLMVSGHEDSSCVLYDI 77 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~d~ 77 (125)
|++.+.|.+++.||+...++... +.+|. ..+.++||.|.. ..|++|+.||.+.|||+
T Consensus 115 lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~--------------------~SvkS~cf~~~n~~vF~tGgRDg~illWD~ 174 (720)
T KOG0321|consen 115 LVSASGDSTIRPWDVKTSRLVGGRLNLGHT--------------------GSVKSECFMPTNPAVFCTGGRDGEILLWDC 174 (720)
T ss_pred EEEccCCceeeeeeeccceeecceeecccc--------------------cccchhhhccCCCcceeeccCCCcEEEEEE
Confidence 57889999999999999887665 77888 677888999965 78899999999999999
Q ss_pred CCCc---------------------------eeEEeCCCCCceeE---EEEccCCCeEEEeec-CCeEEEEeCCCCC
Q psy14458 78 RGSR---------------------------PLQTFKPHTADVRS---IRFSPSAYYLLTGGY-DNKLVLTDLQGTM 123 (125)
Q Consensus 78 ~~~~---------------------------~~~~~~~~~~~v~~---~~~~~~~~~~~~~~~-d~~i~~~~~~~~~ 123 (125)
+... ......++.+.+.+ +-+..|..+|+++++ |+.|+|||++...
T Consensus 175 R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~ 251 (720)
T KOG0321|consen 175 RCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNY 251 (720)
T ss_pred eccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccc
Confidence 7311 11112233344444 445567788888887 9999999998754
No 154
>KOG0641|consensus
Probab=99.53 E-value=6.2e-13 Score=79.34 Aligned_cols=100 Identities=30% Similarity=0.602 Sum_probs=88.0
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
|++|..|.+..+||++.++.++.|..|. ..|.|+.|+|...++++++.|..|++-|+...
T Consensus 246 l~sg~~dssc~lydirg~r~iq~f~phs--------------------adir~vrfsp~a~yllt~syd~~ikltdlqgd 305 (350)
T KOG0641|consen 246 LASGHADSSCMLYDIRGGRMIQRFHPHS--------------------ADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGD 305 (350)
T ss_pred eeeccCCCceEEEEeeCCceeeeeCCCc--------------------cceeEEEeCCCceEEEEecccceEEEeecccc
Confidence 5789999999999999999999999888 78889999999999999999999999998642
Q ss_pred ---c-eeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 81 ---R-PLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 81 ---~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
+ ++...-.|+.++..+.|+|+..-+++.+.|++..+|.+.
T Consensus 306 la~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 306 LAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred hhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence 2 233344699999999999999999999999999999764
No 155
>KOG0307|consensus
Probab=99.52 E-value=1e-13 Score=96.71 Aligned_cols=123 Identities=19% Similarity=0.324 Sum_probs=92.0
Q ss_pred CeeecCCCeEEEEECCCCcceeee--cCCCCCeEEEEecCc-----------------------ccccccCCC--CCeEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTF--KPHTADVRSIHLDHY-----------------------TTEAGTRQG--SPVSA 53 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~--~~~~~~i~~~~~~~~-----------------------~~~~~~~~~--~~i~~ 53 (125)
|++|++||.|.|||+...+.-..+ .....+|.++.|+.. .+.....+. ..+..
T Consensus 132 LASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~ 211 (1049)
T KOG0307|consen 132 LASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSV 211 (1049)
T ss_pred eeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceee
Confidence 689999999999999875544443 225678899998631 111122222 24779
Q ss_pred EEECCCC-CEEEEEeCCC---cEEEEEcCC-CceeEEeCCCCCceeEEEEccCC-CeEEEeecCCeEEEEeCCCCC
Q psy14458 54 LCVDPSG-RLMVSGHEDS---SCVLYDIRG-SRPLQTFKPHTADVRSIRFSPSA-YYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 54 ~~~~~~~-~~~~~~~~~~---~i~~~d~~~-~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+.|+|+. ..++++++|. .|.+||+|. ..++..++.|...|.++.|++.+ .++++++.|+.|.+||.+++.
T Consensus 212 l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgE 287 (1049)
T KOG0307|consen 212 LAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGE 287 (1049)
T ss_pred eeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCce
Confidence 9999986 5666666553 389999987 45677788999999999999954 899999999999999998864
No 156
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.52 E-value=1.1e-12 Score=82.25 Aligned_cols=100 Identities=16% Similarity=0.254 Sum_probs=79.4
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEE-EEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLM-VSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~i~~~d~~~ 79 (125)
+++++.|+.|++||+.+++....+..+. .+.+++|+|++..+ +++..++.|++||..+
T Consensus 4 ~~s~~~d~~v~~~d~~t~~~~~~~~~~~---------------------~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~ 62 (300)
T TIGR03866 4 YVSNEKDNTISVIDTATLEVTRTFPVGQ---------------------RPRGITLSKDGKLLYVCASDSDTIQVIDLAT 62 (300)
T ss_pred EEEecCCCEEEEEECCCCceEEEEECCC---------------------CCCceEECCCCCEEEEEECCCCeEEEEECCC
Confidence 4688999999999999888877776443 35678999999876 5677889999999998
Q ss_pred CceeEEeCCCCCceeEEEEccCCCeEEE-eecCCeEEEEeCCCC
Q psy14458 80 SRPLQTFKPHTADVRSIRFSPSAYYLLT-GGYDNKLVLTDLQGT 122 (125)
Q Consensus 80 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~d~~i~~~~~~~~ 122 (125)
++....+..+.. +..+.|+|+++.++. ++.|+.+.+||+++.
T Consensus 63 ~~~~~~~~~~~~-~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~ 105 (300)
T TIGR03866 63 GEVIGTLPSGPD-PELFALHPNGKILYIANEDDNLVTVIDIETR 105 (300)
T ss_pred CcEEEeccCCCC-ccEEEECCCCCEEEEEcCCCCeEEEEECCCC
Confidence 887776664433 567899999987755 456899999999864
No 157
>KOG0650|consensus
Probab=99.52 E-value=2.2e-13 Score=90.20 Aligned_cols=74 Identities=22% Similarity=0.379 Sum_probs=50.6
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCCCC
Q psy14458 51 VSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTMRP 125 (125)
Q Consensus 51 i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~ 125 (125)
+.++.|+|...+++.++ ...|++||+..++.+..+......|..++.+|.|..++.|+.|+.+.++|+.-..+|
T Consensus 569 vq~v~FHPs~p~lfVaT-q~~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskP 642 (733)
T KOG0650|consen 569 VQRVKFHPSKPYLFVAT-QRSVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKP 642 (733)
T ss_pred eeEEEecCCCceEEEEe-ccceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcch
Confidence 34444444444444442 334555555555444445445678999999999999999999999999999877654
No 158
>KOG0639|consensus
Probab=99.52 E-value=4.2e-14 Score=92.14 Aligned_cols=100 Identities=19% Similarity=0.363 Sum_probs=89.3
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCc
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSR 81 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 81 (125)
++++.||.|.|||+.+...+..|++|. +...||.++++|..|-+|+-|++|+.||++++.
T Consensus 525 FsccsdGnI~vwDLhnq~~VrqfqGht--------------------DGascIdis~dGtklWTGGlDntvRcWDlregr 584 (705)
T KOG0639|consen 525 FSCCSDGNIAVWDLHNQTLVRQFQGHT--------------------DGASCIDISKDGTKLWTGGLDNTVRCWDLREGR 584 (705)
T ss_pred eeeccCCcEEEEEcccceeeecccCCC--------------------CCceeEEecCCCceeecCCCccceeehhhhhhh
Confidence 678999999999999999999999999 889999999999999999999999999999988
Q ss_pred eeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 82 PLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 82 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
.+.... ....|.++.++|++.+++.|=+.+.+.+......
T Consensus 585 qlqqhd-F~SQIfSLg~cP~~dWlavGMens~vevlh~skp 624 (705)
T KOG0639|consen 585 QLQQHD-FSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKP 624 (705)
T ss_pred hhhhhh-hhhhheecccCCCccceeeecccCcEEEEecCCc
Confidence 776554 5678999999999999999999888887765543
No 159
>KOG1272|consensus
Probab=99.51 E-value=3.6e-14 Score=91.35 Aligned_cols=104 Identities=19% Similarity=0.324 Sum_probs=91.2
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
|++++..|.++.-|+.+|+.+..+.... ..+..++-+|-...+-+|..+|+|.+|.....
T Consensus 224 L~~~~~~G~L~Y~DVS~GklVa~~~t~~--------------------G~~~vm~qNP~NaVih~GhsnGtVSlWSP~sk 283 (545)
T KOG1272|consen 224 LVAASEAGFLKYQDVSTGKLVASIRTGA--------------------GRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSK 283 (545)
T ss_pred eeecccCCceEEEeechhhhhHHHHccC--------------------CccchhhcCCccceEEEcCCCceEEecCCCCc
Confidence 4677888888888888888887776555 56778888888888999999999999999988
Q ss_pred ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCCC
Q psy14458 81 RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTMR 124 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~ 124 (125)
+++..+-.|.++|+++++.++|.++++.+.|..++|||+++..+
T Consensus 284 ePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~q 327 (545)
T KOG1272|consen 284 EPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQ 327 (545)
T ss_pred chHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccc
Confidence 88888888999999999999999999999999999999997644
No 160
>KOG2106|consensus
Probab=99.48 E-value=2.8e-12 Score=83.67 Aligned_cols=115 Identities=11% Similarity=0.199 Sum_probs=86.8
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccc--------------------cCCCCCeEEEEECCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAG--------------------TRQGSPVSALCVDPSG 60 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--------------------~~~~~~i~~~~~~~~~ 60 (125)
|+|++.|+.+++|+ ..+.+.... -..+..++.|++...... -..+++++++.++|+|
T Consensus 383 ~~T~gqdk~v~lW~--~~k~~wt~~-~~d~~~~~~fhpsg~va~Gt~~G~w~V~d~e~~~lv~~~~d~~~ls~v~ysp~G 459 (626)
T KOG2106|consen 383 LLTCGQDKHVRLWN--DHKLEWTKI-IEDPAECADFHPSGVVAVGTATGRWFVLDTETQDLVTIHTDNEQLSVVRYSPDG 459 (626)
T ss_pred eeeccCcceEEEcc--CCceeEEEE-ecCceeEeeccCcceEEEeeccceEEEEecccceeEEEEecCCceEEEEEcCCC
Confidence 58999999999999 455544433 345556666655331111 1336899999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCc-eeEEeC-CCCCceeEEEEccCCCeEEEeecCCeEEEEe
Q psy14458 61 RLMVSGHEDSSCVLYDIRGSR-PLQTFK-PHTADVRSIRFSPSAYYLLTGGYDNKLVLTD 118 (125)
Q Consensus 61 ~~~~~~~~~~~i~~~d~~~~~-~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~ 118 (125)
.+++.|+.|+.|++|-+.... ...... .+..++.++.|++|++++.+-+.|-.|-.|.
T Consensus 460 ~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~ 519 (626)
T KOG2106|consen 460 AFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGDYEILYWK 519 (626)
T ss_pred CEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEeccCceEEEEEc
Confidence 999999999999999986543 332222 3448899999999999999999999999993
No 161
>KOG1524|consensus
Probab=99.48 E-value=2.6e-13 Score=89.15 Aligned_cols=99 Identities=17% Similarity=0.241 Sum_probs=75.0
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccc---------------------ccccCCCCCeEEEEECCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTT---------------------EAGTRQGSPVSALCVDPS 59 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~---------------------~~~~~~~~~i~~~~~~~~ 59 (125)
|+|.++||.|++|. ++|-...++.....+|++++|.+... ....+|..-|.++.|++.
T Consensus 119 Llt~GEDG~iKiWS-rsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~ 197 (737)
T KOG1524|consen 119 LLTAGEDGVIKIWS-RSGMLRSTVVQNEESIRCARWAPNSNSIVFCQGGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQ 197 (737)
T ss_pred eeeecCCceEEEEe-ccchHHHHHhhcCceeEEEEECCCCCceEEecCCeEEEeecccccceeEEeccCcEEEEeecCcc
Confidence 57999999999999 56766666666788999999976432 222377788999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccC
Q psy14458 60 GRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPS 101 (125)
Q Consensus 60 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~ 101 (125)
.+.+++|++|-..++||.. |..++.-..|+-++++++|+|+
T Consensus 198 s~lI~sgGED~kfKvWD~~-G~~Lf~S~~~ey~ITSva~npd 238 (737)
T KOG1524|consen 198 SNIIASGGEDFRFKIWDAQ-GANLFTSAAEEYAITSVAFNPE 238 (737)
T ss_pred ccceeecCCceeEEeeccc-CcccccCChhccceeeeeeccc
Confidence 9999999999999999975 3334334445555555555555
No 162
>KOG0649|consensus
Probab=99.47 E-value=2.5e-12 Score=77.35 Aligned_cols=100 Identities=19% Similarity=0.326 Sum_probs=79.8
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
++.++.|+.++-||+++|+....+++|+ +-+.++..-.....+++|++||++++||.+++
T Consensus 129 i~~AgGD~~~y~~dlE~G~i~r~~rGHt--------------------DYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~ 188 (325)
T KOG0649|consen 129 ILFAGGDGVIYQVDLEDGRIQREYRGHT--------------------DYVHSVVGRNANGQILSGAEDGTVRVWDTKTQ 188 (325)
T ss_pred EEEecCCeEEEEEEecCCEEEEEEcCCc--------------------ceeeeeeecccCcceeecCCCccEEEEecccc
Confidence 3567799999999999999999999999 78888888666678999999999999999999
Q ss_pred ceeEEeCCCCC----------ceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 81 RPLQTFKPHTA----------DVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 81 ~~~~~~~~~~~----------~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+.+..+...+. ++-+++- +..++++|+ ...+.+|.+++..
T Consensus 189 k~v~~ie~yk~~~~lRp~~g~wigala~--~edWlvCGg-Gp~lslwhLrsse 238 (325)
T KOG0649|consen 189 KHVSMIEPYKNPNLLRPDWGKWIGALAV--NEDWLVCGG-GPKLSLWHLRSSE 238 (325)
T ss_pred ceeEEeccccChhhcCcccCceeEEEec--cCceEEecC-CCceeEEeccCCC
Confidence 88877764322 2444444 555777764 4669999998764
No 163
>KOG0644|consensus
Probab=99.47 E-value=2.3e-14 Score=97.86 Aligned_cols=96 Identities=20% Similarity=0.436 Sum_probs=89.3
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
+++|++|..++||...+..++....+|. ..|+.++.+.+..++++++.|..|++|.+.++
T Consensus 205 Iitgsdd~lvKiwS~et~~~lAs~rGhs--------------------~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~ 264 (1113)
T KOG0644|consen 205 IITGSDDRLVKIWSMETARCLASCRGHS--------------------GDITDLAVSSNNTMIAAASNDKVIRVWRLPDG 264 (1113)
T ss_pred EeecCccceeeeeeccchhhhccCCCCc--------------------cccchhccchhhhhhhhcccCceEEEEecCCC
Confidence 4799999999999999999999999998 67788899988899999999999999999999
Q ss_pred ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 81 RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
.++..+.+|.+.|++++|+|-. +.+.||++++||.+
T Consensus 265 ~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r 300 (1113)
T KOG0644|consen 265 APVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDAR 300 (1113)
T ss_pred chHHHHhccccceeeeccCccc----cCCCCCceEecccc
Confidence 9999999999999999999965 77889999999987
No 164
>KOG3881|consensus
Probab=99.45 E-value=2.1e-12 Score=81.72 Aligned_cols=102 Identities=26% Similarity=0.461 Sum_probs=88.9
Q ss_pred CeeecCCCeEEEEECCCCc-ceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSR-PLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 79 (125)
|+++..-+.+++||.+.++ ++..|.-.+ .+++++...|.++++++|...+.+..+|.+.
T Consensus 219 fat~T~~hqvR~YDt~~qRRPV~~fd~~E--------------------~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~ 278 (412)
T KOG3881|consen 219 FATITRYHQVRLYDTRHQRRPVAQFDFLE--------------------NPISSTGLTPSGNFIYTGNTKGQLAKFDLRG 278 (412)
T ss_pred EEEEecceeEEEecCcccCcceeEecccc--------------------CcceeeeecCCCcEEEEecccchhheecccC
Confidence 5788888999999987653 455555444 6889999999999999999999999999999
Q ss_pred CceeEE-eCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 80 SRPLQT-FKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 80 ~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
++.+.. +.+..+.++++..+|++.++++++-|+.++|+|+++.
T Consensus 279 ~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktr 322 (412)
T KOG3881|consen 279 GKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTR 322 (412)
T ss_pred ceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccc
Confidence 988776 7788899999999999999999999999999999883
No 165
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.43 E-value=1e-11 Score=77.88 Aligned_cols=108 Identities=15% Similarity=0.208 Sum_probs=76.0
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEE-EeCCCcEEEEEcCCC
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVS-GHEDSSCVLYDIRGS 80 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~i~~~d~~~~ 80 (125)
+++..++.|++||+.+++.+..+..+...+. ........++++|++++++. ...++.+.+||..++
T Consensus 173 ~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~-------------~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~ 239 (300)
T TIGR03866 173 VSSEIGGTVSVIDVATRKVIKKITFEIPGVH-------------PEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTY 239 (300)
T ss_pred EEcCCCCEEEEEEcCcceeeeeeeecccccc-------------cccCCccceEECCCCCEEEEEcCCCCeEEEEECCCC
Confidence 3455689999999998876655432210000 00023446889999987544 345678999999888
Q ss_pred ceeEEeCCCCCceeEEEEccCCCeEEEee-cCCeEEEEeCCCCC
Q psy14458 81 RPLQTFKPHTADVRSIRFSPSAYYLLTGG-YDNKLVLTDLQGTM 123 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~d~~i~~~~~~~~~ 123 (125)
+....+. +...+.++.|+|+++++++++ .++.|.+||++++.
T Consensus 240 ~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~ 282 (300)
T TIGR03866 240 EVLDYLL-VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALK 282 (300)
T ss_pred cEEEEEE-eCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCc
Confidence 7765543 445788999999999988864 58999999998764
No 166
>KOG1063|consensus
Probab=99.43 E-value=1.5e-12 Score=87.41 Aligned_cols=95 Identities=22% Similarity=0.368 Sum_probs=81.6
Q ss_pred CeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCc----ee
Q psy14458 8 SSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSR----PL 83 (125)
Q Consensus 8 ~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~----~~ 83 (125)
-.|++|+..+....+.+.+|. -.|+.++|||++++|++.+.|.++.+|...... ..
T Consensus 552 AvI~lw~t~~W~~~~~L~~Hs--------------------LTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~f 611 (764)
T KOG1063|consen 552 AVIRLWNTANWLQVQELEGHS--------------------LTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRF 611 (764)
T ss_pred eEEEEEeccchhhhheecccc--------------------eEEEEEEECCCCcEEEEeecCceEEeeeeecccchhhhh
Confidence 357788888888888888887 899999999999999999999999999985532 23
Q ss_pred EEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 84 QTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 84 ~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
...+.|..-|....|+|++.+++++|.|+++.+|.....
T Consensus 612 a~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~ 650 (764)
T KOG1063|consen 612 ACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDL 650 (764)
T ss_pred ccccccceEEEEcccCcccceeEEecCCceEEEEeccCc
Confidence 336689999999999999999999999999999987654
No 167
>KOG2919|consensus
Probab=99.43 E-value=5.5e-12 Score=78.50 Aligned_cols=125 Identities=18% Similarity=0.336 Sum_probs=95.1
Q ss_pred CeeecCCCeEEEEECCCCcceeeecC--CCCCe---EEEEecCccccc-----------------------------ccC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKP--HTADV---RSIHLDHYTTEA-----------------------------GTR 46 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~--~~~~i---~~~~~~~~~~~~-----------------------------~~~ 46 (125)
+++.+.|.-|++||..+|+....+.. |..++ -+++|++..... -..
T Consensus 126 ~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGykrcirvFdt~RpGr~c~vy~t~~~~k~g 205 (406)
T KOG2919|consen 126 FAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGYKRCIRVFDTSRPGRDCPVYTTVTKGKFG 205 (406)
T ss_pred eeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecccceEEEeeccCCCCCCcchhhhhccccc
Confidence 47889999999999999987665542 22222 244443311100 113
Q ss_pred CCCCeEEEEECCCC-CEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeec-CCeEEEEeCCCCCC
Q psy14458 47 QGSPVSALCVDPSG-RLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGY-DNKLVLTDLQGTMR 124 (125)
Q Consensus 47 ~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-d~~i~~~~~~~~~~ 124 (125)
+...+.|++++|.. ..++.|+-..++-|+....+.++..+-+|.+.|++++|.++|+.+.+|+. |..|..||+|....
T Consensus 206 q~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~ 285 (406)
T KOG2919|consen 206 QKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRD 285 (406)
T ss_pred ccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccc
Confidence 34678999999976 48899998888889988888889888899999999999999999999885 88999999987654
Q ss_pred C
Q psy14458 125 P 125 (125)
Q Consensus 125 ~ 125 (125)
|
T Consensus 286 p 286 (406)
T KOG2919|consen 286 P 286 (406)
T ss_pred h
Confidence 3
No 168
>KOG0307|consensus
Probab=99.43 E-value=9.1e-13 Score=92.09 Aligned_cols=123 Identities=16% Similarity=0.302 Sum_probs=102.8
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCC--CCeEEEEecCccc---------------------------ccccCCCCCe
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHT--ADVRSIHLDHYTT---------------------------EAGTRQGSPV 51 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~--~~i~~~~~~~~~~---------------------------~~~~~~~~~i 51 (125)
|++++.+|++.|||++..+++-.+..+. ..+..+.|++... .....|...|
T Consensus 177 LAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~Gi 256 (1049)
T KOG0307|consen 177 LASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGI 256 (1049)
T ss_pred hhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccce
Confidence 5789999999999999888776665443 3577888876221 1124788899
Q ss_pred EEEEECCCC-CEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEcc-CCCeEEEeecCCeEEEEeCCCCC
Q psy14458 52 SALCVDPSG-RLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSP-SAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 52 ~~~~~~~~~-~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.++.|++.+ .++++++.|+.|.+|+..+++.+..+....+++..+.|+| +...+++++.||.|.|+.+++..
T Consensus 257 lslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 257 LSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred eeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence 999999987 8899999999999999999999999998889999999999 45688889999999999998764
No 169
>KOG2110|consensus
Probab=99.42 E-value=8e-12 Score=78.65 Aligned_cols=76 Identities=17% Similarity=0.299 Sum_probs=63.2
Q ss_pred CCeEEEEECCCCCEEEEE--eCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCe-EEEEeCCCCCC
Q psy14458 49 SPVSALCVDPSGRLMVSG--HEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNK-LVLTDLQGTMR 124 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~--~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~-i~~~~~~~~~~ 124 (125)
..+..+..++.+.+++-- ...|.|.+||..+-+.+..+.+|++.+.+++|+|+|.+|+++|..|+ |+|+.+.++.+
T Consensus 130 ~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~k 208 (391)
T KOG2110|consen 130 KGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQK 208 (391)
T ss_pred cceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccE
Confidence 456666666666677543 25688999999999999999999999999999999999999999888 89998877653
No 170
>KOG1188|consensus
Probab=99.42 E-value=6.8e-12 Score=78.31 Aligned_cols=123 Identities=17% Similarity=0.275 Sum_probs=87.3
Q ss_pred CeeecCCCeEEEEECCCCcceeeec--CCC-CCeEEEEec-----------------------Cccccc-----ccCCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFK--PHT-ADVRSIHLD-----------------------HYTTEA-----GTRQGS 49 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~--~~~-~~i~~~~~~-----------------------~~~~~~-----~~~~~~ 49 (125)
+.+++.||+|++||++.......+. .+. .+..++..+ -....+ ...|..
T Consensus 87 v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~D 166 (376)
T KOG1188|consen 87 VISCSSDGTVRLWDIRSQAESARISWTQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHND 166 (376)
T ss_pred eEEeccCCeEEEEEeecchhhhheeccCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccC
Confidence 4689999999999999865433332 222 233344332 111111 125778
Q ss_pred CeEEEEECCCC-CEEEEEeCCCcEEEEEcCCCc---eeEEeCCCCCceeEEEEccCC-CeEEEeecCCeEEEEeCCCCC
Q psy14458 50 PVSALCVDPSG-RLMVSGHEDSSCVLYDIRGSR---PLQTFKPHTADVRSIRFSPSA-YYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 50 ~i~~~~~~~~~-~~~~~~~~~~~i~~~d~~~~~---~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~~ 123 (125)
-|+++.|+|+. +++++|+.||.+.+||+.... .+...-.|...|.++.|..++ +-|.+-++.++..+|++..+.
T Consensus 167 DVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~ 245 (376)
T KOG1188|consen 167 DVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGS 245 (376)
T ss_pred cceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCC
Confidence 99999999976 899999999999999997642 233333477889999998876 458888999999999997653
No 171
>KOG0321|consensus
Probab=99.41 E-value=1.1e-12 Score=87.31 Aligned_cols=108 Identities=24% Similarity=0.322 Sum_probs=82.8
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
|+.+.+||.|.++|.+...-. +. .........|...|..+.|-|....|++++.|.++++||+.+.
T Consensus 67 LavadE~G~i~l~dt~~~~fr--~e------------e~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s 132 (720)
T KOG0321|consen 67 LAVADEDGGIILFDTKSIVFR--LE------------ERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTS 132 (720)
T ss_pred EEEecCCCceeeecchhhhcc--hh------------hhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccc
Confidence 467788899999987643211 00 0011112234478889999997788999999999999999998
Q ss_pred ceeEE--eCCCCCceeEEEEcc-CCCeEEEeecCCeEEEEeCCCC
Q psy14458 81 RPLQT--FKPHTADVRSIRFSP-SAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 81 ~~~~~--~~~~~~~v~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+.... +.+|...|.+++|.| |...+++|+.||.|.+||++-.
T Consensus 133 ~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n 177 (720)
T KOG0321|consen 133 RLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCN 177 (720)
T ss_pred eeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEecc
Confidence 77665 778999999999999 5678899999999999999743
No 172
>KOG0771|consensus
Probab=99.41 E-value=4.4e-12 Score=80.65 Aligned_cols=72 Identities=32% Similarity=0.517 Sum_probs=64.1
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeC-CCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFK-PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
..|++++++++|++++.|+.+|.|-+++..+.+.++..+ .|...|+.+.|+|+.+.+++.+.|....+.-+.
T Consensus 282 ~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~ 354 (398)
T KOG0771|consen 282 KSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLA 354 (398)
T ss_pred CcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEe
Confidence 478999999999999999999999999999988777664 899999999999999999998888887776553
No 173
>KOG2055|consensus
Probab=99.39 E-value=1.3e-11 Score=79.74 Aligned_cols=121 Identities=12% Similarity=0.208 Sum_probs=97.5
Q ss_pred CeeecCCCeEEEEECCC--CcceeeecCCCCCeEEEEecCccccc--c------------------------cCCCCCeE
Q psy14458 1 MVSGHEDSSCVLYDIRG--SRPLQTFKPHTADVRSIHLDHYTTEA--G------------------------TRQGSPVS 52 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~--~------------------------~~~~~~i~ 52 (125)
|++++.|+.+++|.+.. .+.++.+.-...||.+..|.+..... . ......+.
T Consensus 228 llvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e 307 (514)
T KOG2055|consen 228 LLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEKSME 307 (514)
T ss_pred EEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeeccccccccccCCCCcccchhh
Confidence 57899999999999864 34455555566778777775432200 0 01234678
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 53 ALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
...+++++++++..+..|.|++....+++.+.+++ -.+.|..+.|+.|++.|++++++|.|.+||++..
T Consensus 308 ~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~K-ieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~ 376 (514)
T KOG2055|consen 308 RFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFK-IEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQN 376 (514)
T ss_pred eeEecCCCCeEEEcccCceEEeehhhhhhhhheee-eccEEeeEEEecCCcEEEEEcCCceEEEEecCCc
Confidence 88899999999999999999999999999999888 6788999999999999999999999999999875
No 174
>KOG1007|consensus
Probab=99.38 E-value=6e-12 Score=77.32 Aligned_cols=104 Identities=21% Similarity=0.357 Sum_probs=75.9
Q ss_pred CCCeEEEEECCCCcc-eeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECC--CCCEEEEEeCCCcEEEEEcCCCce
Q psy14458 6 EDSSCVLYDIRGSRP-LQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDP--SGRLMVSGHEDSSCVLYDIRGSRP 82 (125)
Q Consensus 6 ~d~~i~v~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~i~~~d~~~~~~ 82 (125)
.|+.|.+|++..++. ...+..... ..+....++-+|+| +++.+++. .++++..||+++..+
T Consensus 142 ~dn~i~l~~l~ess~~vaev~ss~s---------------~e~~~~ftsg~WspHHdgnqv~tt-~d~tl~~~D~RT~~~ 205 (370)
T KOG1007|consen 142 DDNNIVLWSLDESSKIVAEVLSSES---------------AEMRHSFTSGAWSPHHDGNQVATT-SDSTLQFWDLRTMKK 205 (370)
T ss_pred ccCceEEEEcccCcchheeeccccc---------------ccccceecccccCCCCccceEEEe-CCCcEEEEEccchhh
Confidence 467777888766554 233221110 01125677888999 45666665 689999999999888
Q ss_pred eEEeC-CCCCceeEEEEccCCC-eEEEeecCCeEEEEeCCCCCCC
Q psy14458 83 LQTFK-PHTADVRSIRFSPSAY-YLLTGGYDNKLVLTDLQGTMRP 125 (125)
Q Consensus 83 ~~~~~-~~~~~v~~~~~~~~~~-~~~~~~~d~~i~~~~~~~~~~~ 125 (125)
...++ +|...|+.+.|+|+.+ +|++|+.|+.+++||.|....|
T Consensus 206 ~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~p 250 (370)
T KOG1007|consen 206 NNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFP 250 (370)
T ss_pred hcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCcc
Confidence 77776 7889999999999765 6677889999999999976554
No 175
>KOG2106|consensus
Probab=99.36 E-value=4.9e-11 Score=78.06 Aligned_cols=76 Identities=17% Similarity=0.365 Sum_probs=53.7
Q ss_pred CCCCCeEEEEECCCCCEEEEEeCCCcEEEEEc--------------------------------------CCCceeEEeC
Q psy14458 46 RQGSPVSALCVDPSGRLMVSGHEDSSCVLYDI--------------------------------------RGSRPLQTFK 87 (125)
Q Consensus 46 ~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~--------------------------------------~~~~~~~~~~ 87 (125)
.|+.....++.+|+.+++++++.|+.+++|+- .+...+. +.
T Consensus 366 gh~delwgla~hps~~q~~T~gqdk~v~lW~~~k~~wt~~~~d~~~~~~fhpsg~va~Gt~~G~w~V~d~e~~~lv~-~~ 444 (626)
T KOG2106|consen 366 GHGDELWGLATHPSKNQLLTCGQDKHVRLWNDHKLEWTKIIEDPAECADFHPSGVVAVGTATGRWFVLDTETQDLVT-IH 444 (626)
T ss_pred ecccceeeEEcCCChhheeeccCcceEEEccCCceeEEEEecCceeEeeccCcceEEEeeccceEEEEecccceeEE-EE
Confidence 45556666666666666666666666666662 2322222 22
Q ss_pred CCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 88 PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 88 ~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
..+.++++++|+|+|.+++.|+.|+.|++|.+...
T Consensus 445 ~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~ 479 (626)
T KOG2106|consen 445 TDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSAN 479 (626)
T ss_pred ecCCceEEEEEcCCCCEEEEecCCCeEEEEEECCC
Confidence 23678999999999999999999999999987643
No 176
>KOG1034|consensus
Probab=99.36 E-value=2.1e-12 Score=80.33 Aligned_cols=100 Identities=19% Similarity=0.231 Sum_probs=80.4
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
+++++.|.+|++||++++.++..|.+-.+ |...|.++.|++++.++++++.|.++++|++...
T Consensus 151 vls~SkD~svRlwnI~~~~Cv~VfGG~eg-----------------HrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~ 213 (385)
T KOG1034|consen 151 VLSASKDHSVRLWNIQTDVCVAVFGGVEG-----------------HRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVK 213 (385)
T ss_pred EEEecCCceEEEEeccCCeEEEEeccccc-----------------ccCcEEEEEEcCCCCeeeccCCcceEEEEecChh
Confidence 47999999999999999999998875321 2278899999999999999999999999999731
Q ss_pred c------e-------------------eE---EeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeC
Q psy14458 81 R------P-------------------LQ---TFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDL 119 (125)
Q Consensus 81 ~------~-------------------~~---~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~ 119 (125)
+ + +- +-..|.+.|-|++| =|+++++-+-++.|..|-.
T Consensus 214 ~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw--~gd~ilSkscenaI~~w~p 278 (385)
T KOG1034|consen 214 EFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRW--FGDFILSKSCENAIVCWKP 278 (385)
T ss_pred HHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHH--HhhheeecccCceEEEEec
Confidence 1 0 01 11247788888888 5679999999999999976
No 177
>KOG2445|consensus
Probab=99.36 E-value=5.9e-11 Score=73.49 Aligned_cols=101 Identities=13% Similarity=0.245 Sum_probs=76.0
Q ss_pred CeeecCCCeEEEEECCCCc----ceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECC--CCCEEEEEeCCCcEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSR----PLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDP--SGRLMVSGHEDSSCVL 74 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~i~~ 74 (125)
++||+.|++|+|||.+... +...-+.|. ..|..+.|-+ .|..+++++.|+++.|
T Consensus 28 mAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~--------------------~Si~rV~WAhPEfGqvvA~cS~Drtv~i 87 (361)
T KOG2445|consen 28 MATCSSDQTVKIWDSTSDSGTWSCTSSWRAHD--------------------GSIWRVVWAHPEFGQVVATCSYDRTVSI 87 (361)
T ss_pred eeeccCCCcEEEEeccCCCCceEEeeeEEecC--------------------CcEEEEEecCccccceEEEEecCCceee
Confidence 5899999999999975443 333445566 5566666654 4789999999999999
Q ss_pred EEcCCC---------ceeEEeCCCCCceeEEEEcc--CCCeEEEeecCCeEEEEeCCC
Q psy14458 75 YDIRGS---------RPLQTFKPHTADVRSIRFSP--SAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 75 ~d~~~~---------~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~d~~i~~~~~~~ 121 (125)
|.-... .....+...+..|..+.|.| -|-.+++++.||++++|+.-.
T Consensus 88 WEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~d 145 (361)
T KOG2445|consen 88 WEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPD 145 (361)
T ss_pred eeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCC
Confidence 986221 12334555677899999999 578899999999999998643
No 178
>KOG2139|consensus
Probab=99.35 E-value=4.5e-11 Score=75.47 Aligned_cols=118 Identities=14% Similarity=0.237 Sum_probs=88.6
Q ss_pred CeeecCCCeEEEEECCCCcceeeecC-CCCCeEEEEecCcccc--------------------------ccc--------
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKP-HTADVRSIHLDHYTTE--------------------------AGT-------- 45 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~--------------------------~~~-------- 45 (125)
|+.+.+|-.|++||-.. ++...++. ....|.++.|.+.... ...
T Consensus 113 fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr~gIciW~~s~tln~~r~~~~~s~~~~qvl~ 191 (445)
T KOG2139|consen 113 FAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAGICIWSDSRTLNANRNIRMMSTHHLQVLQ 191 (445)
T ss_pred hhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeecceeEEEEcCcccccccccccccccchhhee
Confidence 57788999999999765 55555543 4668888888642110 000
Q ss_pred -CCCCCeEEEEECCCCCEEEEEe-CCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeC
Q psy14458 46 -RQGSPVSALCVDPSGRLMVSGH-EDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDL 119 (125)
Q Consensus 46 -~~~~~i~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~ 119 (125)
.....|+++.|.+++..+++++ .+..|.+||..++..+-.....-+.++-+.|+||+.++.+++-|+..++|+.
T Consensus 192 ~pgh~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e 267 (445)
T KOG2139|consen 192 DPGHNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQE 267 (445)
T ss_pred CCCCceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehh
Confidence 1125799999999999998887 4566999999998765544445567888999999999999999999999954
No 179
>KOG1009|consensus
Probab=99.33 E-value=4.8e-12 Score=80.42 Aligned_cols=113 Identities=18% Similarity=0.290 Sum_probs=84.5
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecC---cccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEc
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDH---YTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDI 77 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~ 77 (125)
|++|+.++.|.+|-...- .+. .... ....+. ........|.+.+..++|+|++.++++++.|+.+++||+
T Consensus 80 LASg~D~g~v~lWk~~~~-~~~--~~d~----e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv 152 (434)
T KOG1009|consen 80 LASGGDGGEVFLWKQGDV-RIF--DADT----EADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDV 152 (434)
T ss_pred eeecCCCceEEEEEecCc-CCc--cccc----hhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEe
Confidence 589999999999986521 100 0000 000000 000111224488999999999999999999999999999
Q ss_pred CCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 78 RGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 78 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
..++....+..|+..|..++|.|..+++++-+.|+..+.+.+.
T Consensus 153 ~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~ 195 (434)
T KOG1009|consen 153 HAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAK 195 (434)
T ss_pred ccceeEeeccccccccceeecchhhhhhhhhccCcccceeeee
Confidence 9999999999999999999999999999999999877666554
No 180
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.32 E-value=1.5e-10 Score=74.56 Aligned_cols=98 Identities=32% Similarity=0.573 Sum_probs=82.4
Q ss_pred cCCCeEEEEECCC-CcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeC-CCcEEEEEcCCCce
Q psy14458 5 HEDSSCVLYDIRG-SRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHE-DSSCVLYDIRGSRP 82 (125)
Q Consensus 5 ~~d~~i~v~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~i~~~d~~~~~~ 82 (125)
..|+.+.+|+... ......+..|. ..+..++++|++..++.++. ++.+++|+...+..
T Consensus 131 ~~d~~~~~~~~~~~~~~~~~~~~~~--------------------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (466)
T COG2319 131 SLDGTVKLWDLSTPGKLIRTLEGHS--------------------ESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKP 190 (466)
T ss_pred CCCccEEEEEecCCCeEEEEEecCc--------------------ccEEEEEECCCCCEEEecCCCCCceEEEEcCCCce
Confidence 4488899999887 56666666676 77889999999998888885 99999999998888
Q ss_pred eEEeCCCCCceeEEEEccCCC-eEEEeecCCeEEEEeCCCC
Q psy14458 83 LQTFKPHTADVRSIRFSPSAY-YLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 83 ~~~~~~~~~~v~~~~~~~~~~-~~~~~~~d~~i~~~~~~~~ 122 (125)
+..+..|...|.++.|+|++. .+++++.|+.+.+||.+.+
T Consensus 191 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~ 231 (466)
T COG2319 191 LSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTG 231 (466)
T ss_pred EEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCC
Confidence 888888999999999999987 5555589999999987743
No 181
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.31 E-value=1.2e-11 Score=54.98 Aligned_cols=38 Identities=29% Similarity=0.598 Sum_probs=35.9
Q ss_pred ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEe
Q psy14458 81 RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTD 118 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~ 118 (125)
+++..+.+|.+.|.+++|+|++.++++++.|+.|++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 56788999999999999999999999999999999997
No 182
>KOG1310|consensus
Probab=99.29 E-value=1.7e-11 Score=81.04 Aligned_cols=102 Identities=21% Similarity=0.365 Sum_probs=84.9
Q ss_pred CeeecCCCeEEEEECCCCcceeeec-CCCCCeEEEEecCcccccccCCCCCeEEEEECCC--CCEEEEEeCCCcEEEEEc
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFK-PHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPS--GRLMVSGHEDSSCVLYDI 77 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~i~~~d~ 77 (125)
|++|+.|..+.|||....+.+..+. +|. ..|-++.|-|. ...+++|..|..|+++|+
T Consensus 65 L~SGSDD~r~ivWd~~~~KllhsI~TgHt--------------------aNIFsvKFvP~tnnriv~sgAgDk~i~lfdl 124 (758)
T KOG1310|consen 65 LASGSDDTRLIVWDPFEYKLLHSISTGHT--------------------ANIFSVKFVPYTNNRIVLSGAGDKLIKLFDL 124 (758)
T ss_pred EeecCCcceEEeecchhcceeeeeecccc--------------------cceeEEeeeccCCCeEEEeccCcceEEEEec
Confidence 6899999999999998878777664 566 67778888884 578899999999999999
Q ss_pred CC----------CceeEEeCCCCCceeEEEEccCC-CeEEEeecCCeEEEEeCCCC
Q psy14458 78 RG----------SRPLQTFKPHTADVRSIRFSPSA-YYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 78 ~~----------~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~ 122 (125)
.. .+....+..|...|..++-.|++ ..+.++++||+|+-+|++..
T Consensus 125 ~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREp 180 (758)
T KOG1310|consen 125 DSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREP 180 (758)
T ss_pred ccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCC
Confidence 74 23455566788999999999987 78899999999999999863
No 183
>KOG2055|consensus
Probab=99.29 E-value=6.3e-11 Score=76.62 Aligned_cols=72 Identities=18% Similarity=0.278 Sum_probs=63.0
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCcee--EEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVR--SIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~--~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
..+..++|+.+++.++..+.+|.|++||++...+++.+. ..+.|. +++.++++.++++|+..|.+-|||.++
T Consensus 345 G~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~-D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s 418 (514)
T KOG2055|consen 345 GVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFV-DDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNS 418 (514)
T ss_pred cEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEe-ecCccceeeeeecCCCceEEeccCcceEEEeccch
Confidence 678999999999999999999999999999999888887 445554 577778999999999999999999654
No 184
>KOG0771|consensus
Probab=99.28 E-value=1.2e-11 Score=78.67 Aligned_cols=70 Identities=17% Similarity=0.308 Sum_probs=65.5
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 52 SALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
.+++++.++..+++++.||.+|+|++...+.+.....|.+.|.++.|+|||++|++-+.| ..+||+.+++
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g 217 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTG 217 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccC
Confidence 789999999999999999999999988877777777899999999999999999999999 8999999887
No 185
>KOG2919|consensus
Probab=99.28 E-value=6.3e-11 Score=73.92 Aligned_cols=75 Identities=24% Similarity=0.388 Sum_probs=60.0
Q ss_pred CCCCeEEEEECCCCCEEEEEeC-CCcEEEEEcCC-CceeEEeCCCCC-ceeE--EEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 47 QGSPVSALCVDPSGRLMVSGHE-DSSCVLYDIRG-SRPLQTFKPHTA-DVRS--IRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 47 ~~~~i~~~~~~~~~~~~~~~~~-~~~i~~~d~~~-~~~~~~~~~~~~-~v~~--~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
|+..|+-++|.++|+.+++|.. +-.|..||++. ..++..+..|.. .... +...|++++|++|+.||.|++||+++
T Consensus 249 h~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~ 328 (406)
T KOG2919|consen 249 HGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKD 328 (406)
T ss_pred cCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCC
Confidence 3488999999999999998875 45699999987 456666765644 3333 55678999999999999999999987
No 186
>KOG1963|consensus
Probab=99.28 E-value=1.9e-10 Score=78.97 Aligned_cols=79 Identities=25% Similarity=0.454 Sum_probs=67.3
Q ss_pred CCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC----CceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 46 RQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRG----SRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 46 ~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
.|...+++.++||+++++++|..||.|.+|.--. ......+..|-.+|.++.|+++|.++.+|+.++.+.+|.+.+
T Consensus 203 ~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T 282 (792)
T KOG1963|consen 203 HHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLET 282 (792)
T ss_pred hhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecC
Confidence 3446689999999999999999999999997433 123455667889999999999999999999999999999988
Q ss_pred CCC
Q psy14458 122 TMR 124 (125)
Q Consensus 122 ~~~ 124 (125)
+.+
T Consensus 283 ~~k 285 (792)
T KOG1963|consen 283 GKK 285 (792)
T ss_pred CCc
Confidence 754
No 187
>KOG4227|consensus
Probab=99.27 E-value=1.7e-10 Score=73.87 Aligned_cols=104 Identities=16% Similarity=0.263 Sum_probs=87.1
Q ss_pred CeeecCCCeEEEEECCC------CcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEE
Q psy14458 1 MVSGHEDSSCVLYDIRG------SRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVL 74 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~ 74 (125)
|++|+.|..+++|++.. .+++.....+ |.+.|-|++|.....++++|..+++|-.
T Consensus 71 L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~-------------------H~SNIF~L~F~~~N~~~~SG~~~~~VI~ 131 (609)
T KOG4227|consen 71 LASGGDDMHGRVWNVDELMVRKTPKPIGVMEHP-------------------HRSNIFSLEFDLENRFLYSGERWGTVIK 131 (609)
T ss_pred EeecCCcceeeeechHHHHhhcCCCCceeccCc-------------------cccceEEEEEccCCeeEecCCCcceeEe
Confidence 68999999999999853 3455544322 2278899999999999999999999999
Q ss_pred EEcCCCceeEEeCCCC---CceeEEEEccCCCeEEEeecCCeEEEEeCCCCCC
Q psy14458 75 YDIRGSRPLQTFKPHT---ADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTMR 124 (125)
Q Consensus 75 ~d~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~ 124 (125)
.|+.+.+.+..+. |. +.|.++..+|..+.+++.+.++.+.+||.+....
T Consensus 132 HDiEt~qsi~V~~-~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~ 183 (609)
T KOG4227|consen 132 HDIETKQSIYVAN-ENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQN 183 (609)
T ss_pred eecccceeeeeec-ccCcccceeecccCCCCceEEEEecCceEEEEeccCCCC
Confidence 9999999888776 44 4899999999989999999999999999987764
No 188
>KOG3914|consensus
Probab=99.26 E-value=5.4e-11 Score=75.53 Aligned_cols=79 Identities=20% Similarity=0.305 Sum_probs=67.0
Q ss_pred cCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeC-CCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 45 TRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFK-PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 45 ~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
..|-+.++.++++|++.++++++.|+.|++-.....-.+..|. +|+.-|..++.-++ ..|+++++|+++++||+.++.
T Consensus 148 lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~-~~LlS~sGD~tlr~Wd~~sgk 226 (390)
T KOG3914|consen 148 LGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDN-YLLLSGSGDKTLRLWDITSGK 226 (390)
T ss_pred hhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccC-ceeeecCCCCcEEEEecccCC
Confidence 3455899999999999999999999999998776555566665 69999999998765 469999999999999999876
Q ss_pred C
Q psy14458 124 R 124 (125)
Q Consensus 124 ~ 124 (125)
.
T Consensus 227 ~ 227 (390)
T KOG3914|consen 227 L 227 (390)
T ss_pred c
Confidence 4
No 189
>KOG1524|consensus
Probab=99.26 E-value=7.5e-11 Score=77.88 Aligned_cols=120 Identities=15% Similarity=0.233 Sum_probs=87.5
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccc---------------------cCCCCCeEEEEECCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAG---------------------TRQGSPVSALCVDPS 59 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---------------------~~~~~~i~~~~~~~~ 59 (125)
|+.++.||++.+.+ +.++....+..|.+.+.+-+|++...... .....+|.|++|.|+
T Consensus 78 ~~i~s~DGkf~il~-k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGMLRStl~Q~~~~v~c~~W~p~ 156 (737)
T KOG1524|consen 78 LLICSNDGRFVILN-KSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGMLRSTVVQNEESIRCARWAPN 156 (737)
T ss_pred EEEEcCCceEEEec-ccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccchHHHHHhhcCceeEEEEECCC
Confidence 46788899888888 56777777777887777777765332221 123356777777777
Q ss_pred CCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 60 GRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 60 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
.+.++-+ ..+.+.+-.+.....+..+++|.+-|.++.|+|...++++|++|-..++||-.+.
T Consensus 157 S~~vl~c-~g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~ 218 (737)
T KOG1524|consen 157 SNSIVFC-QGGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGA 218 (737)
T ss_pred CCceEEe-cCCeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeecccCc
Confidence 6544443 4555666666656666678899999999999999999999999999999997643
No 190
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.26 E-value=6e-10 Score=71.81 Aligned_cols=101 Identities=36% Similarity=0.609 Sum_probs=82.6
Q ss_pred eeecC-CCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCC-EEEEEeCCCcEEEEEcCC
Q psy14458 2 VSGHE-DSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGR-LMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 2 ~t~~~-d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~i~~~d~~~ 79 (125)
++++. |+.+++|++..++.+..+..|. ..+.+++++|++. .+++++.|+.+++||...
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~ 230 (466)
T COG2319 171 ASGSSLDGTIKLWDLRTGKPLSTLAGHT--------------------DPVSSLAFSPDGGLLIASGSSDGTIRLWDLST 230 (466)
T ss_pred EecCCCCCceEEEEcCCCceEEeeccCC--------------------CceEEEEEcCCcceEEEEecCCCcEEEEECCC
Confidence 34554 9999999998877777777766 7889999999887 555558999999999887
Q ss_pred CceeE-EeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 80 SRPLQ-TFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 80 ~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+.... .+..|...+ -..|+|++..+++++.|+.+++|+++...
T Consensus 231 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 274 (466)
T COG2319 231 GKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSS 274 (466)
T ss_pred CcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCC
Confidence 77777 577787765 44899999888999999999999988654
No 191
>KOG2096|consensus
Probab=99.25 E-value=6.1e-10 Score=69.58 Aligned_cols=71 Identities=13% Similarity=0.308 Sum_probs=59.4
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeC
Q psy14458 48 GSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDL 119 (125)
Q Consensus 48 ~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~ 119 (125)
.-.+-.+-....+.++++++.|..|.+|+++ ++.+.++..........+.+|+|+++++++..--+++|+.
T Consensus 187 ~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~ 257 (420)
T KOG2096|consen 187 QVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEP 257 (420)
T ss_pred ccceEEEeecCCceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEE
Confidence 3445556666678899999999999999998 8888888765556677889999999999999999999985
No 192
>KOG0280|consensus
Probab=99.23 E-value=2.6e-10 Score=70.32 Aligned_cols=80 Identities=28% Similarity=0.318 Sum_probs=64.9
Q ss_pred CCCCCeEEEEECCCC-CEEEEEeCCCcEEEEEcCC-CceeEE-eCCCCCceeEEEEcc-CCCeEEEeecCCeEEEEeCCC
Q psy14458 46 RQGSPVSALCVDPSG-RLMVSGHEDSSCVLYDIRG-SRPLQT-FKPHTADVRSIRFSP-SAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 46 ~~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~d~~~-~~~~~~-~~~~~~~v~~~~~~~-~~~~~~~~~~d~~i~~~~~~~ 121 (125)
.|.......+|+... +.+.+|++|+.+..||++. ++.+.. .+.|...|.+|.-+| .+.+|++|+.|..|++||.|+
T Consensus 163 ~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRn 242 (339)
T KOG0280|consen 163 VHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRN 242 (339)
T ss_pred ccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhc
Confidence 455677777887654 7889999999999999994 444444 446888899998887 678999999999999999998
Q ss_pred CCCC
Q psy14458 122 TMRP 125 (125)
Q Consensus 122 ~~~~ 125 (125)
..+|
T Consensus 243 m~kP 246 (339)
T KOG0280|consen 243 MGKP 246 (339)
T ss_pred ccCc
Confidence 7765
No 193
>KOG1310|consensus
Probab=99.22 E-value=9.6e-11 Score=77.60 Aligned_cols=78 Identities=28% Similarity=0.435 Sum_probs=70.6
Q ss_pred ccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeC-CCCCceeEEEEcc--CCCeEEEeecCCeEEEEeCC
Q psy14458 44 GTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFK-PHTADVRSIRFSP--SAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 44 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~v~~~~~~~--~~~~~~~~~~d~~i~~~~~~ 120 (125)
..+|..-|+|+.|+.+|.+|++|++|-.+.|||.-..++++.+. +|.+.|.++.|-| +.+++++|.+|..|+++|+.
T Consensus 46 L~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~ 125 (758)
T KOG1310|consen 46 LTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLD 125 (758)
T ss_pred hccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEecc
Confidence 34566889999999999999999999999999998888888876 8999999999999 66899999999999999997
Q ss_pred C
Q psy14458 121 G 121 (125)
Q Consensus 121 ~ 121 (125)
.
T Consensus 126 ~ 126 (758)
T KOG1310|consen 126 S 126 (758)
T ss_pred c
Confidence 4
No 194
>KOG2048|consensus
Probab=99.22 E-value=8.4e-10 Score=74.29 Aligned_cols=101 Identities=13% Similarity=0.159 Sum_probs=83.4
Q ss_pred CeeecCCCeEEEEECCCCcc-eeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRP-LQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 79 (125)
||.+-.||.|.+|+++.+-. ...+.++.. ..|.+++|++ +..|++.+.+|.|..||+.+
T Consensus 40 lAvsRt~g~IEiwN~~~~w~~~~vi~g~~d-------------------rsIE~L~W~e-~~RLFS~g~sg~i~EwDl~~ 99 (691)
T KOG2048|consen 40 LAVSRTDGNIEIWNLSNNWFLEPVIHGPED-------------------RSIESLAWAE-GGRLFSSGLSGSITEWDLHT 99 (691)
T ss_pred eeeeccCCcEEEEccCCCceeeEEEecCCC-------------------CceeeEEEcc-CCeEEeecCCceEEEEeccc
Confidence 56788899999999987644 334555442 6799999995 45577777999999999999
Q ss_pred CceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 80 SRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 80 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
.+....+....+.+++++.+|.+..++.||.||.+..++...
T Consensus 100 lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p 141 (691)
T KOG2048|consen 100 LKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGP 141 (691)
T ss_pred CceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCC
Confidence 999999998889999999999999999999999777766544
No 195
>KOG0642|consensus
Probab=99.22 E-value=1.4e-10 Score=76.55 Aligned_cols=74 Identities=23% Similarity=0.450 Sum_probs=69.4
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
..+..+.++|++...+++..+..|+++|..+++.+....+|...|+++++.|+|-+++++++|+.+.+|.+...
T Consensus 490 ~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k 563 (577)
T KOG0642|consen 490 PQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVK 563 (577)
T ss_pred CccceEEecCCCCeeEecccCCceecccccccccchheeeccceecceeecCCCceEEeecCCceeehhhccch
Confidence 56788999999999999999999999999999999999999999999999999999999999999999988543
No 196
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.22 E-value=1.4e-09 Score=64.88 Aligned_cols=71 Identities=23% Similarity=0.525 Sum_probs=57.0
Q ss_pred CCeEEEEECCCCCEEEE--EeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeec---CCeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLMVS--GHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGY---DNKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~--~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---d~~i~~~~~~~~ 122 (125)
.+|.+++|+|+++.++. |..++.+.+||++ .+.+..+. ...++.+.|+|+|++++.++. .|.+.+||+++.
T Consensus 60 ~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~ 135 (194)
T PF08662_consen 60 GPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKK 135 (194)
T ss_pred CceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCC
Confidence 46999999999988654 4466789999996 66666664 456789999999999999874 467999999854
No 197
>KOG1587|consensus
Probab=99.20 E-value=1.3e-10 Score=78.40 Aligned_cols=99 Identities=16% Similarity=0.278 Sum_probs=78.6
Q ss_pred eeecCCCeEEEEECC-CCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCC-CEEEEEeCCCcEEEEEcCC
Q psy14458 2 VSGHEDSSCVLYDIR-GSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSG-RLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~d~~~ 79 (125)
++++ |-.+++|.-. ...++..+..+. ..+++++|||.. ..|+++..+|.+.+||+..
T Consensus 415 ls~g-DW~vriWs~~~~~~Pl~~~~~~~--------------------~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~ 473 (555)
T KOG1587|consen 415 LSVG-DWTVRIWSEDVIASPLLSLDSSP--------------------DYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQ 473 (555)
T ss_pred eeec-cceeEeccccCCCCcchhhhhcc--------------------ceeeeeEEcCcCceEEEEEcCCCceehhhhhc
Confidence 4555 8889999877 455666665555 568999999987 6778889999999999975
Q ss_pred --CceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 80 --SRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 80 --~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
..++.+..........+.|+++|+++++|...|.+.++++..
T Consensus 474 ~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~ 517 (555)
T KOG1587|consen 474 DDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSE 517 (555)
T ss_pred cccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence 345665555556667889999999999999999999999963
No 198
>KOG0290|consensus
Probab=99.19 E-value=9.7e-10 Score=67.87 Aligned_cols=109 Identities=12% Similarity=0.237 Sum_probs=79.0
Q ss_pred CeeecCCCeEEEEECCCCcceeeecC---CCCCeEEEEecC-------------------------cccccccCCCCCeE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKP---HTADVRSIHLDH-------------------------YTTEAGTRQGSPVS 52 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~---~~~~i~~~~~~~-------------------------~~~~~~~~~~~~i~ 52 (125)
|++.+.||++++||++.......+.. ...+..-+.|+. .......+|...|+
T Consensus 212 FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VN 291 (364)
T KOG0290|consen 212 FASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVN 291 (364)
T ss_pred EEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCccccc
Confidence 68999999999999997654333322 134555666643 22334458899999
Q ss_pred EEEECCCC-CEEEEEeCCCcEEEEEcCCCc------eeEEeCCCCCceeEEEEcc-CCCeEEEeec
Q psy14458 53 ALCVDPSG-RLMVSGHEDSSCVLYDIRGSR------PLQTFKPHTADVRSIRFSP-SAYYLLTGGY 110 (125)
Q Consensus 53 ~~~~~~~~-~~~~~~~~~~~i~~~d~~~~~------~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~ 110 (125)
.++|.|.. ..+.++++|..+.+||+.... ++..+. ..++|+.+.|+| .+.+++.+..
T Consensus 292 gIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~-a~~EVNqi~Ws~~~~Dwiai~~~ 356 (364)
T KOG0290|consen 292 GIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYT-AGGEVNQIQWSSSQPDWIAICFG 356 (364)
T ss_pred ceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhh-ccceeeeeeecccCCCEEEEEec
Confidence 99999975 889999999999999997532 233333 567899999998 5677777654
No 199
>KOG4328|consensus
Probab=99.19 E-value=3.4e-10 Score=73.24 Aligned_cols=106 Identities=18% Similarity=0.304 Sum_probs=76.9
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcC--
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIR-- 78 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~-- 78 (125)
|+|++.|++.+|||++....... | +.....|...|.+..|||.+-.+++.+.|..|+|||..
T Consensus 338 laT~s~D~T~kIWD~R~l~~K~s------p----------~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~ 401 (498)
T KOG4328|consen 338 LATASLDQTAKIWDLRQLRGKAS------P----------FLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCI 401 (498)
T ss_pred eeecccCcceeeeehhhhcCCCC------c----------ceecccccceeeeeEEcCCCCceEeeccCCceEEeecccc
Confidence 68999999999999987533221 0 11112233789999999998779999999999999984
Q ss_pred --CCceeEEeCCCCC----ce--eEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 79 --GSRPLQTFKPHTA----DV--RSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 79 --~~~~~~~~~~~~~----~v--~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.-++...+. |.. +. ....|.|+..+|++|..-..|-++|-..+.
T Consensus 402 sa~~~p~~~I~-Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q 453 (498)
T KOG4328|consen 402 SAKDEPLGTIP-HNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQ 453 (498)
T ss_pred cccCCccceee-ccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCE
Confidence 334444443 332 22 245799999999999998889999876553
No 200
>KOG1063|consensus
Probab=99.18 E-value=1.6e-10 Score=77.99 Aligned_cols=78 Identities=27% Similarity=0.435 Sum_probs=69.8
Q ss_pred cCCCCCeEEEEECCCCCEEEEEeCC-----CcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeC
Q psy14458 45 TRQGSPVSALCVDPSGRLMVSGHED-----SSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDL 119 (125)
Q Consensus 45 ~~~~~~i~~~~~~~~~~~~~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~ 119 (125)
..|+..|.+++.+|+++++++++.. ..|++|+..+-.....+..|.-.|+.+.|+||+++|++.|.|+++.+|..
T Consensus 522 YGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~ 601 (764)
T KOG1063|consen 522 YGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEV 601 (764)
T ss_pred ccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCceEEeeee
Confidence 4788999999999999999999843 45899998887777788899999999999999999999999999999987
Q ss_pred CCC
Q psy14458 120 QGT 122 (125)
Q Consensus 120 ~~~ 122 (125)
+..
T Consensus 602 ~~~ 604 (764)
T KOG1063|consen 602 QED 604 (764)
T ss_pred ecc
Confidence 654
No 201
>KOG2321|consensus
Probab=99.17 E-value=5.8e-10 Score=74.18 Aligned_cols=75 Identities=17% Similarity=0.385 Sum_probs=64.2
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeC------CCCC-----ceeEEEEccCCCeEEEeecCCeEEEE
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFK------PHTA-----DVRSIRFSPSAYYLLTGGYDNKLVLT 117 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~------~~~~-----~v~~~~~~~~~~~~~~~~~d~~i~~~ 117 (125)
..++++.+++...++++|+.+|.|..||.++...+..+. .|.+ .|+++.|+-+|-.+++|+.+|.+.+|
T Consensus 176 ~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iy 255 (703)
T KOG2321|consen 176 GELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIY 255 (703)
T ss_pred ccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEE
Confidence 788999999999999999999999999999876555444 2222 49999999999999999999999999
Q ss_pred eCCCCC
Q psy14458 118 DLQGTM 123 (125)
Q Consensus 118 ~~~~~~ 123 (125)
|+++..
T Consensus 256 DLRa~~ 261 (703)
T KOG2321|consen 256 DLRASK 261 (703)
T ss_pred EcccCC
Confidence 999865
No 202
>KOG1272|consensus
Probab=99.17 E-value=1.5e-10 Score=75.06 Aligned_cols=94 Identities=24% Similarity=0.439 Sum_probs=75.5
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCc
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSR 81 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 81 (125)
-+|...|+|.+|......++..+..|. .+|.++++.++|.++++.+.|..++|||++.-.
T Consensus 267 h~GhsnGtVSlWSP~skePLvKiLcH~--------------------g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ 326 (545)
T KOG1272|consen 267 HLGHSNGTVSLWSPNSKEPLVKILCHR--------------------GPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFY 326 (545)
T ss_pred EEcCCCceEEecCCCCcchHHHHHhcC--------------------CCcceEEECCCCcEEeecccccceeEeeecccc
Confidence 368889999999999888888888888 788999999999999999999999999999877
Q ss_pred eeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEe
Q psy14458 82 PLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTD 118 (125)
Q Consensus 82 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~ 118 (125)
.+.+... .-....+++|..| +++.+....+.+|-
T Consensus 327 ql~t~~t-p~~a~~ls~Sqkg--lLA~~~G~~v~iw~ 360 (545)
T KOG1272|consen 327 QLHTYRT-PHPASNLSLSQKG--LLALSYGDHVQIWK 360 (545)
T ss_pred ccceeec-CCCcccccccccc--ceeeecCCeeeeeh
Confidence 6666653 4455677786554 44555556688883
No 203
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.14 E-value=4e-09 Score=68.67 Aligned_cols=100 Identities=18% Similarity=0.293 Sum_probs=76.7
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCc
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSR 81 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 81 (125)
++-..+++|.+.|..+.+.+..+.... ..-..+.++|++++++..+.||.|.++|+.+++
T Consensus 10 V~~~~~~~v~viD~~t~~~~~~i~~~~--------------------~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~ 69 (369)
T PF02239_consen 10 VVERGSGSVAVIDGATNKVVARIPTGG--------------------APHAGLKFSPDGRYLYVANRDGTVSVIDLATGK 69 (369)
T ss_dssp EEEGGGTEEEEEETTT-SEEEEEE-ST--------------------TEEEEEE-TT-SSEEEEEETTSEEEEEETTSSS
T ss_pred EEecCCCEEEEEECCCCeEEEEEcCCC--------------------CceeEEEecCCCCEEEEEcCCCeEEEEECCccc
Confidence 356678999999999998888887443 233457789999999999999999999999999
Q ss_pred eeEEeCCCCCceeEEEEccCCCeEEEee-cCCeEEEEeCCCC
Q psy14458 82 PLQTFKPHTADVRSIRFSPSAYYLLTGG-YDNKLVLTDLQGT 122 (125)
Q Consensus 82 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~d~~i~~~~~~~~ 122 (125)
.+..++. ......+++++||+++++++ .++.+.++|.++.
T Consensus 70 ~v~~i~~-G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tl 110 (369)
T PF02239_consen 70 VVATIKV-GGNPRGIAVSPDGKYVYVANYEPGTVSVIDAETL 110 (369)
T ss_dssp EEEEEE--SSEEEEEEE--TTTEEEEEEEETTEEEEEETTT-
T ss_pred EEEEEec-CCCcceEEEcCCCCEEEEEecCCCceeEeccccc
Confidence 9988874 44467899999999998876 5899999998775
No 204
>KOG1523|consensus
Probab=99.14 E-value=9.2e-10 Score=68.59 Aligned_cols=122 Identities=17% Similarity=0.255 Sum_probs=96.0
Q ss_pred CeeecCCCeEEEEECCCC---cceeeecCCCCCeEEEEecCccccccc--------------------------CCCCCe
Q psy14458 1 MVSGHEDSSCVLYDIRGS---RPLQTFKPHTADVRSIHLDHYTTEAGT--------------------------RQGSPV 51 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~--------------------------~~~~~i 51 (125)
|++++.|..-++|....+ ++.-.+..+.+..+++.|.+....... ...+.|
T Consensus 70 Ivtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv 149 (361)
T KOG1523|consen 70 IVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTV 149 (361)
T ss_pred eeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccce
Confidence 578999999999998433 455566668889999999875443332 223678
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEEcCC------------------CceeEEeCCCCCceeEEEEccCCCeEEEeecCCe
Q psy14458 52 SALCVDPSGRLMVSGHEDSSCVLYDIRG------------------SRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNK 113 (125)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~------------------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~ 113 (125)
++++|+|+.-+++.|+.|+..+++...- ++.+.++....+.|+.+.|+|+|..|+-.++|.+
T Consensus 150 ~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~ 229 (361)
T KOG1523|consen 150 TSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDST 229 (361)
T ss_pred eeeeccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCc
Confidence 9999999999999999999999988631 2344455456788999999999999999999999
Q ss_pred EEEEeCCCC
Q psy14458 114 LVLTDLQGT 122 (125)
Q Consensus 114 i~~~~~~~~ 122 (125)
+.+-|-...
T Consensus 230 v~~~da~~p 238 (361)
T KOG1523|consen 230 VSFVDAAGP 238 (361)
T ss_pred eEEeecCCC
Confidence 999887655
No 205
>KOG1517|consensus
Probab=99.14 E-value=1.3e-09 Score=76.97 Aligned_cols=103 Identities=19% Similarity=0.333 Sum_probs=76.9
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECC-CCCEEEEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDP-SGRLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~i~~~d~~~ 79 (125)
|++++.-..|+|||+...+....+..... .-++++.-+. .++.++.|..||.|++||.+.
T Consensus 1180 Ll~tGd~r~IRIWDa~~E~~~~diP~~s~-------------------t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~ 1240 (1387)
T KOG1517|consen 1180 LLVTGDVRSIRIWDAHKEQVVADIPYGSS-------------------TLVTALSADLVHGNIIAAGFADGSVRVYDRRM 1240 (1387)
T ss_pred EEecCCeeEEEEEecccceeEeecccCCC-------------------ccceeecccccCCceEEEeecCCceEEeeccc
Confidence 34556678899999987666555442211 3345444333 369999999999999999887
Q ss_pred Cc---eeEEeCCCCCc--eeEEEEccCCC-eEEEeecCCeEEEEeCCCC
Q psy14458 80 SR---PLQTFKPHTAD--VRSIRFSPSAY-YLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 80 ~~---~~~~~~~~~~~--v~~~~~~~~~~-~~~~~~~d~~i~~~~~~~~ 122 (125)
.. .+...+.|... |.++.+.++|- .+++|+.||.|++||+|..
T Consensus 1241 a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~ 1289 (1387)
T KOG1517|consen 1241 APPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMS 1289 (1387)
T ss_pred CCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccC
Confidence 43 46667778877 99999998764 5999999999999999974
No 206
>KOG0322|consensus
Probab=99.12 E-value=8.6e-11 Score=71.49 Aligned_cols=58 Identities=24% Similarity=0.410 Sum_probs=54.4
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIR 78 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~ 78 (125)
|||+++|++|+||+-+++.++..++-|. ..+++++|+|+.+.++.++.|++|.+|++.
T Consensus 266 lATAGWD~RiRVyswrtl~pLAVLkyHs--------------------agvn~vAfspd~~lmAaaskD~rISLWkLY 323 (323)
T KOG0322|consen 266 LATAGWDHRIRVYSWRTLNPLAVLKYHS--------------------AGVNAVAFSPDCELMAAASKDARISLWKLY 323 (323)
T ss_pred EeecccCCcEEEEEeccCCchhhhhhhh--------------------cceeEEEeCCCCchhhhccCCceEEeeecC
Confidence 5899999999999999999999999888 789999999999999999999999999863
No 207
>KOG0650|consensus
Probab=99.12 E-value=3e-10 Score=75.82 Aligned_cols=97 Identities=22% Similarity=0.420 Sum_probs=80.1
Q ss_pred CeeecCCCeEEEEECCCC-cceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRGS-RPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 79 (125)
|+.|+.|++++.||+.-. ++.+.+..|. ..++.+++++...++++|+.||++.|+--+-
T Consensus 622 li~gs~d~k~~WfDldlsskPyk~lr~H~--------------------~avr~Va~H~ryPLfas~sdDgtv~Vfhg~V 681 (733)
T KOG0650|consen 622 LILGSYDKKMCWFDLDLSSKPYKTLRLHE--------------------KAVRSVAFHKRYPLFASGSDDGTVIVFHGMV 681 (733)
T ss_pred EEEecCCCeeEEEEcccCcchhHHhhhhh--------------------hhhhhhhhccccceeeeecCCCcEEEEeeee
Confidence 467999999999999754 5666777777 7888999999999999999999999886542
Q ss_pred ------Cc---eeEEeCCCCCc----eeEEEEccCCCeEEEeecCCeEEEE
Q psy14458 80 ------SR---PLQTFKPHTAD----VRSIRFSPSAYYLLTGGYDNKLVLT 117 (125)
Q Consensus 80 ------~~---~~~~~~~~~~~----v~~~~~~~~~~~~~~~~~d~~i~~~ 117 (125)
.. ++..+++|... |....|+|..-+++++++|++|++|
T Consensus 682 Y~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 682 YNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred ehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence 12 35556677655 8888999999999999999999998
No 208
>KOG4378|consensus
Probab=99.12 E-value=2.4e-10 Score=74.97 Aligned_cols=121 Identities=10% Similarity=0.155 Sum_probs=88.3
Q ss_pred ecCCCeEEEEECCCCcceeeecCC--CCCeEEEEecCcccccc-------------------------cCCCCCeEEEEE
Q psy14458 4 GHEDSSCVLYDIRGSRPLQTFKPH--TADVRSIHLDHYTTEAG-------------------------TRQGSPVSALCV 56 (125)
Q Consensus 4 ~~~d~~i~v~d~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~-------------------------~~~~~~i~~~~~ 56 (125)
++....+++||+........+..+ ...+.+++|........ ...+..-.|++.
T Consensus 8 aS~gd~~kl~D~s~~~~~~~~~~~t~~pg~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd~~~Cv~~ 87 (673)
T KOG4378|consen 8 ASTGDKTKLSDFSDLETKSEYVHQTAEPGDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGDNAFCVAC 87 (673)
T ss_pred eccCCceEEeecccccCccccccCCCCCcceeeeccccceEEEeecCCceeEEEecccCCCCccceeeccccchHHHHhh
Confidence 334446999999766544443322 23477777765432111 012234456666
Q ss_pred CCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCCC
Q psy14458 57 DPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTMR 124 (125)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~ 124 (125)
.....++++|+..+.|+|||++.....+.++.|...|+++.|+-...+|++++..|.|.+..+.++.+
T Consensus 88 ~s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~ 155 (673)
T KOG4378|consen 88 ASQSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQK 155 (673)
T ss_pred hhcceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCcc
Confidence 66678999999999999999996667777889999999999999999999999999999999887654
No 209
>KOG1538|consensus
Probab=99.11 E-value=4.3e-10 Score=76.29 Aligned_cols=71 Identities=17% Similarity=0.352 Sum_probs=65.1
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
..|..++|-|+|..++.+ .+..+.+||...|..+.++++|+..|.|++|+.||+.+++|+.|..+.+|+-+
T Consensus 13 hci~d~afkPDGsqL~lA-Ag~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~k 83 (1081)
T KOG1538|consen 13 HCINDIAFKPDGTQLILA-AGSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSK 83 (1081)
T ss_pred cchheeEECCCCceEEEe-cCCEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEeccc
Confidence 368899999999888777 46679999999999999999999999999999999999999999999999754
No 210
>KOG1523|consensus
Probab=99.11 E-value=1.5e-09 Score=67.68 Aligned_cols=74 Identities=11% Similarity=0.189 Sum_probs=63.9
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC-C--ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 48 GSPVSALCVDPSGRLMVSGHEDSSCVLYDIRG-S--RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 48 ~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~-~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
...+++++|+|..+.|++++.|..-++|.... + ++...+..++...+++.|+|..+.|++|+..+.|.+|-++.
T Consensus 55 d~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ 131 (361)
T KOG1523|consen 55 DKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQ 131 (361)
T ss_pred CcceeEEeecCCCCceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEec
Confidence 38899999999999999999999999999843 3 34444556899999999999999999999999999997754
No 211
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.10 E-value=4.1e-10 Score=49.87 Aligned_cols=28 Identities=25% Similarity=0.616 Sum_probs=27.1
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEE
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYD 76 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d 76 (125)
..|.+++|+|++.++++++.|+.|++||
T Consensus 12 ~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 12 SSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp SSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CcEEEEEEecccccceeeCCCCEEEEEC
Confidence 8899999999999999999999999997
No 212
>KOG1240|consensus
Probab=99.09 E-value=6.8e-09 Score=74.29 Aligned_cols=76 Identities=22% Similarity=0.461 Sum_probs=62.4
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeC-CCCCceeEEEEccC---CCeEEEee--cCCeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFK-PHTADVRSIRFSPS---AYYLLTGG--YDNKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~v~~~~~~~~---~~~~~~~~--~d~~i~~~~~~~~ 122 (125)
+.|++++.+|.++.+++|+..|.+-+||++-+.++.++. ++..++.++..+|- ....++++ ..+.+.+|++.++
T Consensus 1196 G~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g 1275 (1431)
T KOG1240|consen 1196 GLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETG 1275 (1431)
T ss_pred cceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccC
Confidence 579999999999999999999999999999998888876 45678888888772 24555544 5788999999887
Q ss_pred CC
Q psy14458 123 MR 124 (125)
Q Consensus 123 ~~ 124 (125)
..
T Consensus 1276 ~~ 1277 (1431)
T KOG1240|consen 1276 LR 1277 (1431)
T ss_pred cc
Confidence 53
No 213
>KOG3881|consensus
Probab=99.08 E-value=2.2e-09 Score=68.32 Aligned_cols=112 Identities=19% Similarity=0.289 Sum_probs=86.9
Q ss_pred CeeecCC--CeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCC--CCEEEEEeCCCcEEEEE
Q psy14458 1 MVSGHED--SSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPS--GRLMVSGHEDSSCVLYD 76 (125)
Q Consensus 1 l~t~~~d--~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~i~~~d 76 (125)
+++|+.. ..+.+||+...+++..-+.-...-..+. -.-+++++.|-+. ...|++++.-+.+++||
T Consensus 164 va~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~Lr-----------VPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YD 232 (412)
T KOG3881|consen 164 VATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLR-----------VPVWITDIRFLEGSPNYKFATITRYHQVRLYD 232 (412)
T ss_pred EecCchhcccceeeeecccceeeeeccCCCCccccce-----------eeeeeccceecCCCCCceEEEEecceeEEEec
Confidence 3678888 8899999988766554432221111111 1135677888877 68899999999999999
Q ss_pred cCCC-ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 77 IRGS-RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 77 ~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.+.+ +++..|.....+++++...|.++++++|..-+.+..+|++++.
T Consensus 233 t~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~k 280 (412)
T KOG3881|consen 233 TRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGK 280 (412)
T ss_pred CcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCce
Confidence 9875 5788888788999999999999999999999999999999875
No 214
>KOG1517|consensus
Probab=99.06 E-value=2.7e-09 Score=75.50 Aligned_cols=103 Identities=24% Similarity=0.411 Sum_probs=78.3
Q ss_pred CeeecCCCeEEEEECCCCcc---eeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCC-CEEEEEeCCCcEEEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRP---LQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSG-RLMVSGHEDSSCVLYD 76 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~d 76 (125)
++.|..||+|++||.+...+ +...+.|... .+|..+.+-++| ..+++|+.+|.|++||
T Consensus 1224 i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~------------------~~Iv~~slq~~G~~elvSgs~~G~I~~~D 1285 (1387)
T KOG1517|consen 1224 IAAGFADGSVRVYDRRMAPPDSLVCVYREHNDV------------------EPIVHLSLQRQGLGELVSGSQDGDIQLLD 1285 (1387)
T ss_pred EEEeecCCceEEeecccCCccccceeecccCCc------------------ccceeEEeecCCCcceeeeccCCeEEEEe
Confidence 57899999999999986543 4555556521 237788888866 4599999999999999
Q ss_pred cCCCc--eeEEeCCCC--C-ceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 77 IRGSR--PLQTFKPHT--A-DVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 77 ~~~~~--~~~~~~~~~--~-~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
++... .......|. + .++++..+++..++++|+. +.|.||++.+.
T Consensus 1286 lR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~ 1335 (1387)
T KOG1517|consen 1286 LRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSGE 1335 (1387)
T ss_pred cccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecChh
Confidence 98742 222233333 3 5899999999999999999 99999998754
No 215
>KOG1587|consensus
Probab=99.06 E-value=7.2e-09 Score=70.17 Aligned_cols=77 Identities=19% Similarity=0.257 Sum_probs=62.0
Q ss_pred CCeEEEEECCCC-CEEEEEeCCCcEEEEEcCCCce--eEEe----CCCCCceeEEEEccCCCe--EEEeecCCeEEEEeC
Q psy14458 49 SPVSALCVDPSG-RLMVSGHEDSSCVLYDIRGSRP--LQTF----KPHTADVRSIRFSPSAYY--LLTGGYDNKLVLTDL 119 (125)
Q Consensus 49 ~~i~~~~~~~~~-~~~~~~~~~~~i~~~d~~~~~~--~~~~----~~~~~~v~~~~~~~~~~~--~~~~~~d~~i~~~~~ 119 (125)
..++|++|+|.. .+++.|+.+|.|-+||++.+.. ...+ ..|..+|..+.|..+..- +++++.||.|..|++
T Consensus 243 s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~ 322 (555)
T KOG1587|consen 243 SEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWDT 322 (555)
T ss_pred CceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeeeec
Confidence 789999999965 7889999999999999987654 2222 258889999999775444 999999999999998
Q ss_pred CCCCCC
Q psy14458 120 QGTMRP 125 (125)
Q Consensus 120 ~~~~~~ 125 (125)
+....|
T Consensus 323 ~~l~~P 328 (555)
T KOG1587|consen 323 DMLSLP 328 (555)
T ss_pred cccccc
Confidence 876554
No 216
>KOG4547|consensus
Probab=99.02 E-value=2.1e-08 Score=66.66 Aligned_cols=121 Identities=15% Similarity=0.138 Sum_probs=95.3
Q ss_pred CeeecCCCeEEEEECCCCcceeeecC---CCCCeEEEEecC---------------------------------------
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKP---HTADVRSIHLDH--------------------------------------- 38 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~---~~~~i~~~~~~~--------------------------------------- 38 (125)
||....||.+++||...++....|.. -.+...+..|.-
T Consensus 8 ~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v~~ys~ 87 (541)
T KOG4547|consen 8 FALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSVLLYSV 87 (541)
T ss_pred EeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccEEEEEe
Confidence 46778899999999998887666653 233444555520
Q ss_pred -----cccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCe
Q psy14458 39 -----YTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNK 113 (125)
Q Consensus 39 -----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~ 113 (125)
........|...+.++.++.+...|.+++.|+.+..|+......+..+...+..+.+++++||+..+++++ ++
T Consensus 88 ~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~as--~~ 165 (541)
T KOG4547|consen 88 AGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLTAS--RQ 165 (541)
T ss_pred cCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEecc--ce
Confidence 00111125668899999999889999999999999999999999999998888999999999999999887 58
Q ss_pred EEEEeCCCCC
Q psy14458 114 LVLTDLQGTM 123 (125)
Q Consensus 114 i~~~~~~~~~ 123 (125)
|.+||+.++.
T Consensus 166 ik~~~~~~ke 175 (541)
T KOG4547|consen 166 IKVLDIETKE 175 (541)
T ss_pred EEEEEccCce
Confidence 9999998764
No 217
>KOG2315|consensus
Probab=99.01 E-value=2e-08 Score=66.60 Aligned_cols=112 Identities=16% Similarity=0.285 Sum_probs=79.6
Q ss_pred CeEEEEECCCCcceeeecCCCCCeEEEEecCccccccc---------------------CCCCCeEEEEECCCCCEEEEE
Q psy14458 8 SSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGT---------------------RQGSPVSALCVDPSGRLMVSG 66 (125)
Q Consensus 8 ~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---------------------~~~~~i~~~~~~~~~~~~~~~ 66 (125)
.++++.++....+.-.+ ...+||.++.|+........ -...+-+++-|+|.|++++.+
T Consensus 251 q~Lyll~t~g~s~~V~L-~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~~v~df~egpRN~~~fnp~g~ii~lA 329 (566)
T KOG2315|consen 251 QTLYLLATQGESVSVPL-LKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGKPVFDFPEGPRNTAFFNPHGNIILLA 329 (566)
T ss_pred ceEEEEEecCceEEEec-CCCCCceEEEECCCCCEEEEEEecccceEEEEcCCCCEeEeCCCCCccceEECCCCCEEEEe
Confidence 35555565522222222 35889999999875533222 123567889999999998776
Q ss_pred e---CCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeec------CCeEEEEeCCCC
Q psy14458 67 H---EDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGY------DNKLVLTDLQGT 122 (125)
Q Consensus 67 ~---~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~------d~~i~~~~~~~~ 122 (125)
+ --|.+.+||+.+.+++..+..... +-..|+|||++|++++. |..++||+..+.
T Consensus 330 GFGNL~G~mEvwDv~n~K~i~~~~a~~t--t~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG~ 392 (566)
T KOG2315|consen 330 GFGNLPGDMEVWDVPNRKLIAKFKAANT--TVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTGS 392 (566)
T ss_pred ecCCCCCceEEEeccchhhccccccCCc--eEEEEcCCCcEEEEEeccccEEecCCeEEEEecCc
Confidence 5 447899999999888888875443 45789999999988764 788999987654
No 218
>KOG1538|consensus
Probab=99.01 E-value=1.4e-08 Score=69.20 Aligned_cols=118 Identities=13% Similarity=0.189 Sum_probs=90.7
Q ss_pred CeeecCCCeEEEEECCCCcceeeec---CCCCCeEEEEecCcc--------------------------cccccCCCCCe
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFK---PHTADVRSIHLDHYT--------------------------TEAGTRQGSPV 51 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~---~~~~~i~~~~~~~~~--------------------------~~~~~~~~~~i 51 (125)
|+-|..||+|.+-+. +++....+. +...+|.+++|++.. +......+...
T Consensus 147 lalG~~nGTIsiRNk-~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG~~Igk~r~L~FdP 225 (1081)
T KOG1538|consen 147 LALGMFNGTISIRNK-NGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSGKQIGKDRALNFDP 225 (1081)
T ss_pred EEEeccCceEEeecC-CCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEecceeecccccCCCCc
Confidence 356777888888874 344433333 467789999886521 11122334566
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 52 SALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
.|+.+.++|+++..|+.|+.+++|. +.|-.+.+.-....+++.+...|+++.++.|+.||+|-.|++-
T Consensus 226 ~CisYf~NGEy~LiGGsdk~L~~fT-R~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~ 293 (1081)
T KOG1538|consen 226 CCISYFTNGEYILLGGSDKQLSLFT-RDGVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQDGTIACYNLI 293 (1081)
T ss_pred hhheeccCCcEEEEccCCCceEEEe-ecCeEEeeccccceeEEEEEEccCCceEEEEEccCeeehhhhH
Confidence 7999999999999999999999994 6777777777678899999999999999999999999998864
No 219
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=99.00 E-value=5.4e-09 Score=69.70 Aligned_cols=73 Identities=25% Similarity=0.276 Sum_probs=61.6
Q ss_pred CCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 46 RQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 46 ~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
..+..+.|++++|+...++.|+.||.|.+||...+..... ...-....++|+|+|.++++|+..|.+.+||+.
T Consensus 257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~--ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~A 329 (545)
T PF11768_consen 257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLA--KAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMA 329 (545)
T ss_pred ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeee--eecccceEEEEcCCCcEEEEEcCCceEEEEEee
Confidence 4457899999999999999999999999999876643322 234456789999999999999999999999985
No 220
>KOG1963|consensus
Probab=99.00 E-value=2.1e-08 Score=69.28 Aligned_cols=103 Identities=18% Similarity=0.292 Sum_probs=82.0
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
+++|.-||+|.+|.-... .......+.+-|+. ..|++++|+++|.++.+|+.++.+-+|...++
T Consensus 220 ~Aa~d~dGrI~vw~d~~~------~~~~~t~t~lHWH~----------~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~ 283 (792)
T KOG1963|consen 220 LAAGDSDGRILVWRDFGS------SDDSETCTLLHWHH----------DEVNSLSFSSDGAYLLSGGREGVLVLWQLETG 283 (792)
T ss_pred EEEeccCCcEEEEecccc------ccccccceEEEecc----------cccceeEEecCCceEeecccceEEEEEeecCC
Confidence 478889999999974321 12233344455543 68999999999999999999999999999988
Q ss_pred ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 81 RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
++.. +..-.+.|.++.++||+.+.+...+|..|.+..+.
T Consensus 284 ~kqf-LPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~ 322 (792)
T KOG1963|consen 284 KKQF-LPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKAS 322 (792)
T ss_pred Cccc-ccccCCeeEEEEEcCCCCeEEEEecCceEEEEecc
Confidence 7433 44467889999999999999999999999988763
No 221
>KOG4714|consensus
Probab=98.98 E-value=1.2e-09 Score=66.58 Aligned_cols=73 Identities=29% Similarity=0.460 Sum_probs=62.8
Q ss_pred CCeEEEEECCCC-CEEEEEeCCCcEEEEEcCCCce-eEEeCCCCCceeEEEEcc-CCCeEEEeecCCeEEEEeCCC
Q psy14458 49 SPVSALCVDPSG-RLMVSGHEDSSCVLYDIRGSRP-LQTFKPHTADVRSIRFSP-SAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 49 ~~i~~~~~~~~~-~~~~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~i~~~~~~~ 121 (125)
..+++++-+|.. +.+++|+.||.+-+||.++... ...++.|+.+++.+.|+| ++.+|+++++||.+.-||-.+
T Consensus 180 ~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 180 DAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred ccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 448999999965 6778899999999999998643 334568999999999999 889999999999999999764
No 222
>KOG0974|consensus
Probab=98.98 E-value=1.5e-08 Score=71.15 Aligned_cols=98 Identities=22% Similarity=0.268 Sum_probs=77.1
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCc
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSR 81 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 81 (125)
++|+--+.|.+|.....+....+.+|. ..|-.+.++.++.++++.++|.++++|++.+.+
T Consensus 149 ~~gsv~~~iivW~~~~dn~p~~l~GHe--------------------G~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~ 208 (967)
T KOG0974|consen 149 ASGSVFGEIIVWKPHEDNKPIRLKGHE--------------------GSIFSIVTSLDGRYIASVSDDRSIRLWPIDSRE 208 (967)
T ss_pred EeccccccEEEEeccccCCcceecccC--------------------CceEEEEEccCCcEEEEEecCcceeeeeccccc
Confidence 455566667777765322222345555 788899999999999999999999999999877
Q ss_pred eeE-EeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 82 PLQ-TFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 82 ~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
... ..-+|...|..++|.|+ .+++++.|-+.++|+...
T Consensus 209 ~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~~ 247 (967)
T KOG0974|consen 209 VLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGVNG 247 (967)
T ss_pred ccCcccccccceeEEEEeccc--eeEEeccceEEEEEeccc
Confidence 655 34469999999999988 899999999999996543
No 223
>KOG4547|consensus
Probab=98.97 E-value=2e-08 Score=66.83 Aligned_cols=99 Identities=20% Similarity=0.369 Sum_probs=81.8
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
|.+++.|.++..|+....+.+...+... ..+.+++.+|++..+++++ +.|++||+.+.
T Consensus 117 iyS~~ad~~v~~~~~~~~~~~~~~~~~~--------------------~~~~sl~is~D~~~l~~as--~~ik~~~~~~k 174 (541)
T KOG4547|consen 117 IYSVGADLKVVYILEKEKVIIRIWKEQK--------------------PLVSSLCISPDGKILLTAS--RQIKVLDIETK 174 (541)
T ss_pred eEecCCceeEEEEecccceeeeeeccCC--------------------CccceEEEcCCCCEEEecc--ceEEEEEccCc
Confidence 4678889999999988877777777655 7888999999999888874 67999999999
Q ss_pred ceeEEeCCCCCceeEEEEccC-----CCeEEEe-ecCCeEEEEeCCC
Q psy14458 81 RPLQTFKPHTADVRSIRFSPS-----AYYLLTG-GYDNKLVLTDLQG 121 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~-----~~~~~~~-~~d~~i~~~~~~~ 121 (125)
+.+..|.+|.++|++++|.-+ |.++.++ ..+.-+.+|-++.
T Consensus 175 evv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~ 221 (541)
T KOG4547|consen 175 EVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEK 221 (541)
T ss_pred eEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEc
Confidence 999999999999999999876 6666654 4577788886654
No 224
>KOG4227|consensus
Probab=98.93 E-value=2.9e-08 Score=63.95 Aligned_cols=107 Identities=14% Similarity=0.206 Sum_probs=84.8
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
+.+|.++++|...|+.+.+.+.++.... ....|..+..+|..+.+++.+.++.|.+||.+..
T Consensus 120 ~~SG~~~~~VI~HDiEt~qsi~V~~~~~------------------~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~ 181 (609)
T KOG4227|consen 120 LYSGERWGTVIKHDIETKQSIYVANENN------------------NRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDR 181 (609)
T ss_pred EecCCCcceeEeeecccceeeeeecccC------------------cccceeecccCCCCceEEEEecCceEEEEeccCC
Confidence 4689999999999999988888876432 1157889999999999999999999999999876
Q ss_pred c-eeEEe--CCCCCceeEEEEcc-CCCeEEEeecCCeEEEEeCCCCCCC
Q psy14458 81 R-PLQTF--KPHTADVRSIRFSP-SAYYLLTGGYDNKLVLTDLQGTMRP 125 (125)
Q Consensus 81 ~-~~~~~--~~~~~~v~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~~~ 125 (125)
+ ....+ -........+.|+| ...+|++.+..+-+-+||.+....|
T Consensus 182 ~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~ 230 (609)
T KOG4227|consen 182 QNPISLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQARP 230 (609)
T ss_pred CCCCceeeecCCCccceeeeecCCCceeEEeccccCCCCceeeccccch
Confidence 5 22222 23445677899999 6688899999999999998865543
No 225
>KOG2139|consensus
Probab=98.90 E-value=6e-08 Score=61.76 Aligned_cols=86 Identities=17% Similarity=0.228 Sum_probs=63.5
Q ss_pred cCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeE
Q psy14458 5 HEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQ 84 (125)
Q Consensus 5 ~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~ 84 (125)
-.|..|+|||..++..+....-.. ..++-+.|||++.+++.+.-|+..++|+.....-..
T Consensus 215 ~gsssi~iWdpdtg~~~pL~~~gl--------------------gg~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~e 274 (445)
T KOG2139|consen 215 FGSSSIMIWDPDTGQKIPLIPKGL--------------------GGFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKE 274 (445)
T ss_pred cCcceEEEEcCCCCCcccccccCC--------------------CceeeEEEcCCCCEEEEecccceeeeehhcccceec
Confidence 346789999999887655442222 567889999999999999999999999655433222
Q ss_pred EeCCCCCceeEEEEccCCCeEEEeec
Q psy14458 85 TFKPHTADVRSIRFSPSAYYLLTGGY 110 (125)
Q Consensus 85 ~~~~~~~~v~~~~~~~~~~~~~~~~~ 110 (125)
......+.|...+|+|+|++|+-.+.
T Consensus 275 rw~lgsgrvqtacWspcGsfLLf~~s 300 (445)
T KOG2139|consen 275 RWILGSGRVQTACWSPCGSFLLFACS 300 (445)
T ss_pred ceeccCCceeeeeecCCCCEEEEEEc
Confidence 33334558999999999987765544
No 226
>KOG2321|consensus
Probab=98.89 E-value=2.1e-08 Score=67.00 Aligned_cols=114 Identities=20% Similarity=0.281 Sum_probs=79.3
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
|+.|+.||.|..||.+....+..+..... |.+. + .......|+++.|+.+|-.++.|+.+|.+.+||++..
T Consensus 190 la~Gt~~g~VEfwDpR~ksrv~~l~~~~~-v~s~---p-----g~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~ 260 (703)
T KOG2321|consen 190 LACGTEDGVVEFWDPRDKSRVGTLDAASS-VNSH---P-----GGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRAS 260 (703)
T ss_pred EEecccCceEEEecchhhhhheeeecccc-cCCC---c-----cccccCcceEEEecCCceeEEeeccCCcEEEEEcccC
Confidence 46788899999999998766555542211 1000 0 0011256999999999999999999999999999999
Q ss_pred ceeEEeC-CCCCceeEEEEccC-CCeEEEeecCCeEEEEeCCCCC
Q psy14458 81 RPLQTFK-PHTADVRSIRFSPS-AYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 81 ~~~~~~~-~~~~~v~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+++..-. ...-++..+.|.+. +.--+.......+++||-.++.
T Consensus 261 ~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~Dk~~~kiWd~~~Gk 305 (703)
T KOG2321|consen 261 KPLLVKDHGYELPIKKLDWQDTDQQNKVVSMDKRILKIWDECTGK 305 (703)
T ss_pred CceeecccCCccceeeecccccCCCceEEecchHHhhhcccccCC
Confidence 8877554 23346788999874 2333333455779999977653
No 227
>PRK01742 tolB translocation protein TolB; Provisional
Probab=98.86 E-value=7.1e-08 Score=64.16 Aligned_cols=71 Identities=21% Similarity=0.286 Sum_probs=50.4
Q ss_pred CCeEEEEECCCCCEEEEEeCC---CcEEEEEcCCCce--eEEeCCCCCceeEEEEccCCCeEEEee-cCCeEEEE--eCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHED---SSCVLYDIRGSRP--LQTFKPHTADVRSIRFSPSAYYLLTGG-YDNKLVLT--DLQ 120 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~---~~i~~~d~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~-~d~~i~~~--~~~ 120 (125)
..+...+|+|+++.++..+.+ ..|++||+.+++. +..+.. .....+|+|||+.|+.++ .++.+.+| |+.
T Consensus 204 ~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g---~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~ 280 (429)
T PRK01742 204 QPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRG---HNGAPAFSPDGSRLAFASSKDGVLNIYVMGAN 280 (429)
T ss_pred CccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCC---ccCceeECCCCCEEEEEEecCCcEEEEEEECC
Confidence 578899999999988877543 4699999988753 333333 334689999999887764 57765554 654
Q ss_pred CC
Q psy14458 121 GT 122 (125)
Q Consensus 121 ~~ 122 (125)
++
T Consensus 281 ~~ 282 (429)
T PRK01742 281 GG 282 (429)
T ss_pred CC
Confidence 43
No 228
>KOG0644|consensus
Probab=98.85 E-value=1.5e-09 Score=75.12 Aligned_cols=79 Identities=16% Similarity=0.321 Sum_probs=73.7
Q ss_pred cCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 45 TRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 45 ~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
..|-..|.|+.|...|.++++|++|..++||...+..++...++|.+.++.++.+.+..++++++.|..|++|-++.+.
T Consensus 187 lgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~ 265 (1113)
T KOG0644|consen 187 LGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGA 265 (1113)
T ss_pred HhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCc
Confidence 3566789999999999999999999999999999999999999999999999999999999999999999999998764
No 229
>KOG0280|consensus
Probab=98.83 E-value=1.7e-08 Score=62.53 Aligned_cols=99 Identities=24% Similarity=0.301 Sum_probs=68.8
Q ss_pred CeeecCCCeEEEEECCCCc-ceee-ecCCCCCeEEEEecCcccccccCCCCCeEEEEECCC-CCEEEEEeCCCcEEEEEc
Q psy14458 1 MVSGHEDSSCVLYDIRGSR-PLQT-FKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPS-GRLMVSGHEDSSCVLYDI 77 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~-~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~i~~~d~ 77 (125)
+.+|+.|+.+..||++..+ .+.. .+.|. ..|.+|.-+|. ..++++|+-|..|++||.
T Consensus 181 vytGgDD~~l~~~D~R~p~~~i~~n~kvH~--------------------~GV~SI~ss~~~~~~I~TGsYDe~i~~~Dt 240 (339)
T KOG0280|consen 181 VYTGGDDGSLSCWDIRIPKTFIWHNSKVHT--------------------SGVVSIYSSPPKPTYIATGSYDECIRVLDT 240 (339)
T ss_pred EEecCCCceEEEEEecCCcceeeecceeee--------------------cceEEEecCCCCCceEEEeccccceeeeeh
Confidence 4789999999999999433 3322 33344 78888888775 578999999999999999
Q ss_pred CC-CceeEEeCCCCCceeEEEEccCC--CeEEEeecCCeEEEEeCCC
Q psy14458 78 RG-SRPLQTFKPHTADVRSIRFSPSA--YYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 78 ~~-~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~d~~i~~~~~~~ 121 (125)
++ ++++..-. -.+.|+.+.++|.- ..++++=+.| .++.+++.
T Consensus 241 Rnm~kPl~~~~-v~GGVWRi~~~p~~~~~lL~~CMh~G-~ki~~~~~ 285 (339)
T KOG0280|consen 241 RNMGKPLFKAK-VGGGVWRIKHHPEIFHRLLAACMHNG-AKILDSSD 285 (339)
T ss_pred hcccCccccCc-cccceEEEEecchhhhHHHHHHHhcC-ceEEEecc
Confidence 96 56665444 45889999999943 3333332333 44555443
No 230
>KOG1064|consensus
Probab=98.83 E-value=2.4e-08 Score=74.14 Aligned_cols=118 Identities=15% Similarity=0.315 Sum_probs=77.3
Q ss_pred eeecCCCeEEEEECCCCcceeeecCC-CCCeEEEEecCc---------------------ccccccCCCCCeEEEEECCC
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPH-TADVRSIHLDHY---------------------TTEAGTRQGSPVSALCVDPS 59 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~-~~~i~~~~~~~~---------------------~~~~~~~~~~~i~~~~~~~~ 59 (125)
+||+.||.|++|.-..++.+..++.- ...++.+.|+.. .....+-|......+.|-.
T Consensus 2224 ltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~pk~~~s~qchnk~~~Df~Fi~- 2302 (2439)
T KOG1064|consen 2224 LTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQASPKPYTSWQCHNKALSDFRFIG- 2302 (2439)
T ss_pred EecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccCCcceeccccCCccccceeeee-
Confidence 79999999999998877776665421 133333333211 1111123344445555443
Q ss_pred CCEEEEE---eCCCcEEEEEcCCC--ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 60 GRLMVSG---HEDSSCVLYDIRGS--RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 60 ~~~~~~~---~~~~~i~~~d~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
..++++ +.++.+.+||.... ..+. ...|.+.++++++.|..+.+++|+.+|.+++||++.+
T Consensus 2303 -s~~~tag~s~d~~n~~lwDtl~~~~~s~v-~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqr 2368 (2439)
T KOG1064|consen 2303 -SLLATAGRSSDNRNVCLWDTLLPPMNSLV-HTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQR 2368 (2439)
T ss_pred -hhhhccccCCCCCcccchhcccCccccee-eeecCCCceEEEEcCcceEEEecCCcCcEEEeehHHH
Confidence 333333 35677888886442 2222 2679999999999999999999999999999999764
No 231
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=98.80 E-value=5.3e-07 Score=57.97 Aligned_cols=98 Identities=14% Similarity=0.246 Sum_probs=67.7
Q ss_pred eeecCCCeEEEEECCCC-c--ceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEe-CCCcEEEEEc
Q psy14458 2 VSGHEDSSCVLYDIRGS-R--PLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGH-EDSSCVLYDI 77 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~-~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~i~~~d~ 77 (125)
++...|+.|++|++.+. + .+..+.. . .....++++|++++++.++ .++.|.+|++
T Consensus 6 ~~~~~~~~I~~~~~~~~g~l~~~~~~~~-~--------------------~~~~~l~~spd~~~lyv~~~~~~~i~~~~~ 64 (330)
T PRK11028 6 IASPESQQIHVWNLNHEGALTLLQVVDV-P--------------------GQVQPMVISPDKRHLYVGVRPEFRVLSYRI 64 (330)
T ss_pred EEcCCCCCEEEEEECCCCceeeeeEEec-C--------------------CCCccEEECCCCCEEEEEECCCCcEEEEEE
Confidence 45577899999999643 2 2333321 1 3456789999999886654 5788999998
Q ss_pred CC-Cce--eEEeCCCCCceeEEEEccCCCeEEEeec-CCeEEEEeCCC
Q psy14458 78 RG-SRP--LQTFKPHTADVRSIRFSPSAYYLLTGGY-DNKLVLTDLQG 121 (125)
Q Consensus 78 ~~-~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~-d~~i~~~~~~~ 121 (125)
.. ++. ..... .......+.++|+++++++++. ++.+.+|++..
T Consensus 65 ~~~g~l~~~~~~~-~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~ 111 (330)
T PRK11028 65 ADDGALTFAAESP-LPGSPTHISTDHQGRFLFSASYNANCVSVSPLDK 111 (330)
T ss_pred CCCCceEEeeeec-CCCCceEEEECCCCCEEEEEEcCCCeEEEEEECC
Confidence 63 332 22222 3334678999999998888774 88999999863
No 232
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=98.79 E-value=5.1e-07 Score=58.05 Aligned_cols=73 Identities=14% Similarity=0.181 Sum_probs=52.9
Q ss_pred CCeEEEEECCCCCEEEEEeC-CCcEEEEEcCC--Cc--eeEEeCCC------CCceeEEEEccCCCeEEEee-cCCeEEE
Q psy14458 49 SPVSALCVDPSGRLMVSGHE-DSSCVLYDIRG--SR--PLQTFKPH------TADVRSIRFSPSAYYLLTGG-YDNKLVL 116 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~-~~~i~~~d~~~--~~--~~~~~~~~------~~~v~~~~~~~~~~~~~~~~-~d~~i~~ 116 (125)
.....++|+|++++++.++. ++.|.+|++.. ++ .+..+... ......+.++|++++++++. .++.|.+
T Consensus 175 ~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v 254 (330)
T PRK11028 175 AGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISV 254 (330)
T ss_pred CCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEE
Confidence 44668899999999988876 89999999973 22 23333211 12334688999999888875 4789999
Q ss_pred EeCCC
Q psy14458 117 TDLQG 121 (125)
Q Consensus 117 ~~~~~ 121 (125)
|++..
T Consensus 255 ~~i~~ 259 (330)
T PRK11028 255 FSVSE 259 (330)
T ss_pred EEEeC
Confidence 99854
No 233
>KOG0974|consensus
Probab=98.77 E-value=2.2e-07 Score=65.58 Aligned_cols=107 Identities=13% Similarity=0.083 Sum_probs=79.0
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCc
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSR 81 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 81 (125)
+.+..++.+.+||...+.....+........ ....-+-.+++.-++++|+.-+.|.+|......
T Consensus 103 ~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l----------------~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn 166 (967)
T KOG0974|consen 103 ALVTSRNSLLIRDSKNSSVLSKIQSDERCTL----------------YSSLIIGDSAEELYIASGSVFGEIIVWKPHEDN 166 (967)
T ss_pred EEEEcCceEEEEecccCceehhcCCCceEEE----------------EeEEEEeccCcEEEEEeccccccEEEEeccccC
Confidence 4566677888888776666555553332111 122233455566788999999999999987433
Q ss_pred eeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCCC
Q psy14458 82 PLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTMR 124 (125)
Q Consensus 82 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~ 124 (125)
....+.+|++.+.++.++-||.++++.|.|+++++|++.+...
T Consensus 167 ~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~ 209 (967)
T KOG0974|consen 167 KPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREV 209 (967)
T ss_pred CcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccc
Confidence 3335778999999999999999999999999999999988754
No 234
>KOG2111|consensus
Probab=98.75 E-value=9e-07 Score=55.55 Aligned_cols=61 Identities=8% Similarity=0.299 Sum_probs=51.3
Q ss_pred CeeecCCCe-EEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSS-CVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~-i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 79 (125)
+||++..|+ |||||..+++.++.++.-.. ...|.||+|||+..+++.+++.|+++++.++.
T Consensus 196 vATaStkGTLIRIFdt~~g~~l~E~RRG~d------------------~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 196 VATASTKGTLIRIFDTEDGTLLQELRRGVD------------------RADIYCIAFSPNSSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred EEEeccCcEEEEEEEcCCCcEeeeeecCCc------------------hheEEEEEeCCCccEEEEEcCCCeEEEEEeec
Confidence 477888776 67999999999998874221 16799999999999999999999999999875
No 235
>KOG1240|consensus
Probab=98.75 E-value=1.2e-07 Score=68.33 Aligned_cols=80 Identities=19% Similarity=0.296 Sum_probs=62.5
Q ss_pred ccccCCCCCeEEEEECCCC-CEEEEEeCCCcEEEEEcCCC-------ceeEEeCCCCCceeEEEEccCCCeEEEeecCCe
Q psy14458 42 EAGTRQGSPVSALCVDPSG-RLMVSGHEDSSCVLYDIRGS-------RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNK 113 (125)
Q Consensus 42 ~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~d~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~ 113 (125)
.....|...+..++.++.. .++++|+.||+|++|+++.- +...++..-...+.++...+.+..++.++.||.
T Consensus 1042 AhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG~ 1121 (1431)
T KOG1240|consen 1042 AHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDGS 1121 (1431)
T ss_pred ehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCCCe
Confidence 3334556777888888765 99999999999999999752 122333334677889999999999999999999
Q ss_pred EEEEeCCC
Q psy14458 114 LVLTDLQG 121 (125)
Q Consensus 114 i~~~~~~~ 121 (125)
|.+.++.-
T Consensus 1122 v~~~~id~ 1129 (1431)
T KOG1240|consen 1122 VRVLRIDH 1129 (1431)
T ss_pred EEEEEccc
Confidence 99998764
No 236
>KOG4640|consensus
Probab=98.73 E-value=1.8e-07 Score=63.18 Aligned_cols=74 Identities=18% Similarity=0.216 Sum_probs=66.6
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCcee-EEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVR-SIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
..+..+.|+|...++|.+..+|.+-+..+. .+.+.++..+...+. +++|.|||++++.|-.||+|++.|..++.
T Consensus 21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~ 95 (665)
T KOG4640|consen 21 INIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGG 95 (665)
T ss_pred cceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCC
Confidence 678899999999999999999999999877 778888886776676 99999999999999999999999998774
No 237
>PRK01742 tolB translocation protein TolB; Provisional
Probab=98.71 E-value=6.6e-07 Score=59.63 Aligned_cols=68 Identities=13% Similarity=0.221 Sum_probs=48.4
Q ss_pred EEEEECCCCCEEEEEe-CCCcEEE--EEcCCCceeEEeCCCCCceeEEEEccCCCeEEEee-cCCeEEEEeCC
Q psy14458 52 SALCVDPSGRLMVSGH-EDSSCVL--YDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGG-YDNKLVLTDLQ 120 (125)
Q Consensus 52 ~~~~~~~~~~~~~~~~-~~~~i~~--~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~d~~i~~~~~~ 120 (125)
...+|+|+++.++.+. .+|...+ ||+.+++. ..+..+...+....|+|||+.|+..+ .++...+|++.
T Consensus 251 ~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~-~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~ 322 (429)
T PRK01742 251 GAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTP-SQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMS 322 (429)
T ss_pred CceeECCCCCEEEEEEecCCcEEEEEEECCCCCe-EeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEE
Confidence 3679999999887754 6776555 46655543 34555666778899999999777655 56778888764
No 238
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.71 E-value=1.7e-06 Score=57.24 Aligned_cols=100 Identities=18% Similarity=0.278 Sum_probs=78.6
Q ss_pred eeecCCC-eEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 2 VSGHEDS-SCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 2 ~t~~~d~-~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
+.|.+|| .+-|||.++++... +...- ..|.++..+|+|++++.+.....+.+.|+.++
T Consensus 375 vigt~dgD~l~iyd~~~~e~kr-~e~~l--------------------g~I~av~vs~dGK~~vvaNdr~el~vididng 433 (668)
T COG4946 375 VIGTNDGDKLGIYDKDGGEVKR-IEKDL--------------------GNIEAVKVSPDGKKVVVANDRFELWVIDIDNG 433 (668)
T ss_pred EEeccCCceEEEEecCCceEEE-eeCCc--------------------cceEEEEEcCCCcEEEEEcCceEEEEEEecCC
Confidence 5677777 78888887665432 23233 67899999999999999999999999999998
Q ss_pred ceeEEeCCCCCceeEEEEccCCCeEEEeecC----CeEEEEeCCCC
Q psy14458 81 RPLQTFKPHTADVRSIRFSPSAYYLLTGGYD----NKLVLTDLQGT 122 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d----~~i~~~~~~~~ 122 (125)
.....=+...+-+..+.|+|++++++-+--+ ..|+++|+.++
T Consensus 434 nv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~ 479 (668)
T COG4946 434 NVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGG 479 (668)
T ss_pred CeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCC
Confidence 7655444556779999999999999987554 45899998774
No 239
>KOG1645|consensus
Probab=98.69 E-value=1.7e-07 Score=60.37 Aligned_cols=81 Identities=12% Similarity=0.154 Sum_probs=68.6
Q ss_pred cccCCCCCeEEEEECCCCC-EEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCC-CeEEEeecCCeEEEEeCC
Q psy14458 43 AGTRQGSPVSALCVDPSGR-LMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSA-YYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 43 ~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~d~~i~~~~~~ 120 (125)
....++..|..++|+|..+ ++..++.++.|++.|+++...+..+..+ +.+++.+|.-|. .+|.+|-..|.|.++|++
T Consensus 188 ~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R 266 (463)
T KOG1645|consen 188 ILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMR 266 (463)
T ss_pred cccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEcc
Confidence 3445668899999999887 7899999999999999999988888877 789999998865 566777789999999999
Q ss_pred CCCC
Q psy14458 121 GTMR 124 (125)
Q Consensus 121 ~~~~ 124 (125)
....
T Consensus 267 ~~~~ 270 (463)
T KOG1645|consen 267 QPEG 270 (463)
T ss_pred CCCc
Confidence 7654
No 240
>KOG4190|consensus
Probab=98.69 E-value=2.4e-07 Score=62.39 Aligned_cols=123 Identities=15% Similarity=0.243 Sum_probs=86.3
Q ss_pred CeeecCCCeEEEEECCCC-------cceeeecCCCCCeEEEEecCcccc-----------------------cccCCCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGS-------RPLQTFKPHTADVRSIHLDHYTTE-----------------------AGTRQGSP 50 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~-----------------------~~~~~~~~ 50 (125)
|++++.|++|++|.++.. .+..+++.|..+|..+.|-..... ....++..
T Consensus 750 FiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~ScD~giHlWDPFigr~Laq~~dapk~~a~ 829 (1034)
T KOG4190|consen 750 FISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASCDGGIHLWDPFIGRLLAQMEDAPKEGAG 829 (1034)
T ss_pred eeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeeccCcceeecccccchhHhhhcCcccCCC
Confidence 578999999999999752 356677889999988876332211 11122222
Q ss_pred eEEEEECC-CCCEEEE-EeCCCcEEEEEcCCCceeEEeC-----CCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 51 VSALCVDP-SGRLMVS-GHEDSSCVLYDIRGSRPLQTFK-----PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 51 i~~~~~~~-~~~~~~~-~~~~~~i~~~d~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
-...++-. +...+.. ++.+.+|+++|.+..+....++ +-+..+++++..|.|+.++.+-..|+|.+.|.++++
T Consensus 830 ~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~ 909 (1034)
T KOG4190|consen 830 GNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGK 909 (1034)
T ss_pred ceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCc
Confidence 22222222 3444444 4788999999999877655554 234568899999999999999999999999999886
No 241
>PRK05137 tolB translocation protein TolB; Provisional
Probab=98.67 E-value=1.8e-06 Score=57.68 Aligned_cols=74 Identities=15% Similarity=0.112 Sum_probs=54.7
Q ss_pred CCCeEEEEECCCCCEEEEEeC---CCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEE-EeecCCe--EEEEeCCC
Q psy14458 48 GSPVSALCVDPSGRLMVSGHE---DSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLL-TGGYDNK--LVLTDLQG 121 (125)
Q Consensus 48 ~~~i~~~~~~~~~~~~~~~~~---~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~d~~--i~~~~~~~ 121 (125)
...+....|+|+++.++..+. +..|++||+.+++... +..+.+.+....|+|||+.++ +.+.++. |+++|+.+
T Consensus 201 ~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~-l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~ 279 (435)
T PRK05137 201 SSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQREL-VGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRS 279 (435)
T ss_pred CCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEE-eecCCCcccCcEECCCCCEEEEEEecCCCceEEEEECCC
Confidence 367889999999998877653 4679999998876533 344556677899999998775 4455554 77778876
Q ss_pred C
Q psy14458 122 T 122 (125)
Q Consensus 122 ~ 122 (125)
+
T Consensus 280 ~ 280 (435)
T PRK05137 280 G 280 (435)
T ss_pred C
Confidence 5
No 242
>KOG2695|consensus
Probab=98.65 E-value=2.7e-07 Score=58.58 Aligned_cols=100 Identities=17% Similarity=0.219 Sum_probs=71.9
Q ss_pred eeecCCCeEEEEECCCC-----cceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECC-CCCEEEEEeCCCcEEEE
Q psy14458 2 VSGHEDSSCVLYDIRGS-----RPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDP-SGRLMVSGHEDSSCVLY 75 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~i~~~ 75 (125)
..|+..|.|...|++.. .+...+. |. +.|+++..-. ++.+++..+.+|.|++|
T Consensus 268 ~~GcRngeI~~iDLR~rnqG~~~~a~rly-h~--------------------Ssvtslq~Lq~s~q~LmaS~M~gkikLy 326 (425)
T KOG2695|consen 268 FNGCRNGEIFVIDLRCRNQGNGWCAQRLY-HD--------------------SSVTSLQILQFSQQKLMASDMTGKIKLY 326 (425)
T ss_pred EecccCCcEEEEEeeecccCCCcceEEEE-cC--------------------cchhhhhhhccccceEeeccCcCceeEe
Confidence 45777888888888754 1222222 23 6778777666 67889999999999999
Q ss_pred EcCCCce---eEEeCCCCCceeE--EEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 76 DIRGSRP---LQTFKPHTADVRS--IRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 76 d~~~~~~---~~~~~~~~~~v~~--~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
|.+--++ +..+++|-+.-.- +..++....+++++.|-..++|.++.+
T Consensus 327 D~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~g 378 (425)
T KOG2695|consen 327 DLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSG 378 (425)
T ss_pred eehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccC
Confidence 9987665 7777777553322 234556678888999999999999865
No 243
>KOG4497|consensus
Probab=98.62 E-value=1.2e-06 Score=55.60 Aligned_cols=88 Identities=10% Similarity=0.223 Sum_probs=66.6
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCC-EEEEEeCCCcEEEEEcCCC
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGR-LMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~i~~~d~~~~ 80 (125)
.....|+.|.+|++....--..++... ..+..++|||+|+ .+.+..-+-.|.+|.+.+.
T Consensus 65 C~~yk~~~vqvwsl~Qpew~ckIdeg~--------------------agls~~~WSPdgrhiL~tseF~lriTVWSL~t~ 124 (447)
T KOG4497|consen 65 CVAYKDPKVQVWSLVQPEWYCKIDEGQ--------------------AGLSSISWSPDGRHILLTSEFDLRITVWSLNTQ 124 (447)
T ss_pred eeeeccceEEEEEeecceeEEEeccCC--------------------CcceeeeECCCcceEeeeecceeEEEEEEeccc
Confidence 345678899999988776666676555 7889999999995 5566667888999999887
Q ss_pred ceeEEeCCCCCceeEEEEccCCCeEEEeec
Q psy14458 81 RPLQTFKPHTADVRSIRFSPSAYYLLTGGY 110 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 110 (125)
+... +..-+..+..++|+|||++.+.++.
T Consensus 125 ~~~~-~~~pK~~~kg~~f~~dg~f~ai~sR 153 (447)
T KOG4497|consen 125 KGYL-LPHPKTNVKGYAFHPDGQFCAILSR 153 (447)
T ss_pred eeEE-ecccccCceeEEECCCCceeeeeec
Confidence 6554 3323444678999999999988765
No 244
>KOG1064|consensus
Probab=98.61 E-value=1.7e-07 Score=69.92 Aligned_cols=109 Identities=18% Similarity=0.337 Sum_probs=81.0
Q ss_pred eecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCc------------------------ccccccCCCCCeEEEEECC
Q psy14458 3 SGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHY------------------------TTEAGTRQGSPVSALCVDP 58 (125)
Q Consensus 3 t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~------------------------~~~~~~~~~~~i~~~~~~~ 58 (125)
.+..||.+.+|.+. .++....+.|........|-+. .......|....+++++-|
T Consensus 2268 i~d~dg~l~l~q~~-pk~~~s~qchnk~~~Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P 2346 (2439)
T KOG1064|consen 2268 IVDGDGDLSLWQAS-PKPYTSWQCHNKALSDFRFIGSLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAP 2346 (2439)
T ss_pred eeccCCceeecccC-CcceeccccCCccccceeeeehhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcC
Confidence 45678889999876 4444444555555555554321 1111146778999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
...++++|+.+|.|++||++..+..+.+.. ++ ...++++|+..|.++||++...
T Consensus 2347 ~~qllisggr~G~v~l~D~rqrql~h~~~~---------~~-~~~~f~~~ss~g~ikIw~~s~~ 2400 (2439)
T KOG1064|consen 2347 KHQLLISGGRKGEVCLFDIRQRQLRHTFQA---------LD-TREYFVTGSSEGNIKIWRLSEF 2400 (2439)
T ss_pred cceEEEecCCcCcEEEeehHHHHHHHHhhh---------hh-hhheeeccCcccceEEEEcccc
Confidence 999999999999999999998887776664 33 5678999999999999998754
No 245
>PRK05137 tolB translocation protein TolB; Provisional
Probab=98.58 E-value=4.6e-06 Score=55.75 Aligned_cols=73 Identities=19% Similarity=0.218 Sum_probs=51.4
Q ss_pred CCeEEEEECCCCCEEE-EEeCCCc--EEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeec-C--CeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLMV-SGHEDSS--CVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGY-D--NKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~-~~~~~~~--i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-d--~~i~~~~~~~~ 122 (125)
..+...+|+|+++.++ +.+.++. |++||+.+++.. .+..+........|+|||+.++..+. + ..|+++|+.++
T Consensus 246 g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~-~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~ 324 (435)
T PRK05137 246 GMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTTT-RLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGS 324 (435)
T ss_pred CcccCcEECCCCCEEEEEEecCCCceEEEEECCCCceE-EccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCC
Confidence 4556789999998764 5555555 777888776543 34445556677899999998877663 3 36888887654
No 246
>PRK04922 tolB translocation protein TolB; Provisional
Probab=98.57 E-value=6.5e-06 Score=55.00 Aligned_cols=73 Identities=10% Similarity=0.040 Sum_probs=49.0
Q ss_pred CeEEEEECCCCCEEEEEeC-CCc--EEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCC---eEEEEeCCCCC
Q psy14458 50 PVSALCVDPSGRLMVSGHE-DSS--CVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDN---KLVLTDLQGTM 123 (125)
Q Consensus 50 ~i~~~~~~~~~~~~~~~~~-~~~--i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~---~i~~~~~~~~~ 123 (125)
.....+|+|+++.++..+. +|. |+++++.+++... +..+........|+|||+.++..+.++ .|.+||+.++.
T Consensus 293 ~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~-lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~ 371 (433)
T PRK04922 293 IDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAER-LTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGS 371 (433)
T ss_pred CccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEE-eecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCC
Confidence 4456799999998876653 444 6777776655322 222333455789999999988765432 59999987653
No 247
>PRK04922 tolB translocation protein TolB; Provisional
Probab=98.56 E-value=2.4e-06 Score=57.07 Aligned_cols=74 Identities=18% Similarity=0.194 Sum_probs=53.1
Q ss_pred CCeEEEEECCCCCEEEEEeCC---CcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEE-EeecCC--eEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHED---SSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLL-TGGYDN--KLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~d~--~i~~~~~~~~ 122 (125)
..+...+|+|+++.++..+.+ ..|++||+.+++... +....+...+..|+|||+.++ +.+.++ .|++||+.++
T Consensus 204 ~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g 282 (433)
T PRK04922 204 EPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-VASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSR 282 (433)
T ss_pred CccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-eccCCCCccCceECCCCCEEEEEEeCCCCceEEEEECCCC
Confidence 567889999999988877633 459999998776533 223344455789999998775 445554 5999998765
Q ss_pred C
Q psy14458 123 M 123 (125)
Q Consensus 123 ~ 123 (125)
.
T Consensus 283 ~ 283 (433)
T PRK04922 283 Q 283 (433)
T ss_pred C
Confidence 3
No 248
>KOG2066|consensus
Probab=98.54 E-value=1.8e-06 Score=59.96 Aligned_cols=98 Identities=14% Similarity=0.238 Sum_probs=68.3
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCC-----CCEEEEEeCCCcEEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPS-----GRLMVSGHEDSSCVLY 75 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~i~~~ 75 (125)
++||+.||+|.|-.+.+.+...++.- . .++.+++++|+ ...+++|+..| +.++
T Consensus 86 ~asCS~DGkv~I~sl~~~~~~~~~df-~--------------------rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~ 143 (846)
T KOG2066|consen 86 VASCSDDGKVVIGSLFTDDEITQYDF-K--------------------RPIKSIALHPDFSRQQSKQFVSGGMAG-LVLS 143 (846)
T ss_pred EEEecCCCcEEEeeccCCccceeEec-C--------------------CcceeEEeccchhhhhhhheeecCcce-EEEe
Confidence 46777777777777666555444331 2 57788888887 36789999888 6666
Q ss_pred EcCC--CceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 76 DIRG--SRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 76 d~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.-+. .+.-......+++|.++.| .|.+|+.++.+| +++||..++.
T Consensus 144 er~wlgnk~~v~l~~~eG~I~~i~W--~g~lIAWand~G-v~vyd~~~~~ 190 (846)
T KOG2066|consen 144 ERNWLGNKDSVVLSEGEGPIHSIKW--RGNLIAWANDDG-VKVYDTPTRQ 190 (846)
T ss_pred hhhhhcCccceeeecCccceEEEEe--cCcEEEEecCCC-cEEEeccccc
Confidence 5332 1222235556789999999 788999998888 8999987654
No 249
>PRK02889 tolB translocation protein TolB; Provisional
Probab=98.54 E-value=4e-06 Score=55.95 Aligned_cols=71 Identities=13% Similarity=0.125 Sum_probs=50.8
Q ss_pred CCCeEEEEECCCCCEEEEEeCC---CcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEE-EeecCCeEEEEeC
Q psy14458 48 GSPVSALCVDPSGRLMVSGHED---SSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLL-TGGYDNKLVLTDL 119 (125)
Q Consensus 48 ~~~i~~~~~~~~~~~~~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~d~~i~~~~~ 119 (125)
...+...+|+|+++.++..+.+ ..|++||+.+++... +....+.+....|+|||+.++ +.+.++...+|.+
T Consensus 195 ~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~ 269 (427)
T PRK02889 195 PEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTV 269 (427)
T ss_pred CCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEEccCCCceEEEE
Confidence 3678889999999988776533 359999998876543 332344566899999998776 4567777555543
No 250
>PRK03629 tolB translocation protein TolB; Provisional
Probab=98.54 E-value=8.7e-06 Score=54.38 Aligned_cols=73 Identities=11% Similarity=0.131 Sum_probs=49.2
Q ss_pred CCeEEEEECCCCCEEEEEeCC-Cc--EEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecC---CeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHED-SS--CVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYD---NKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~-~~--i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d---~~i~~~~~~~~ 122 (125)
..+....|+|+++.++..+.. +. |+++|+.+++.. .+...........|+|||+.++..+.+ ..|.+||+.++
T Consensus 287 ~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~-~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g 365 (429)
T PRK03629 287 SNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQ-RITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATG 365 (429)
T ss_pred CCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeE-EeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCC
Confidence 456788999999988766654 44 555566655432 233233445678999999988776543 35888998765
No 251
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.54 E-value=5.1e-07 Score=38.60 Aligned_cols=38 Identities=39% Similarity=0.556 Sum_probs=32.8
Q ss_pred ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEe
Q psy14458 81 RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTD 118 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~ 118 (125)
+....+..|...|.++.|+|++..+++++.|+.+++|+
T Consensus 3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 34555667888999999999989999999999999996
No 252
>KOG1409|consensus
Probab=98.53 E-value=3.5e-07 Score=58.01 Aligned_cols=39 Identities=15% Similarity=0.247 Sum_probs=30.4
Q ss_pred eEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 83 LQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 83 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
+..+..-...|.++.+..+-..+++++.|+.|++||++.
T Consensus 357 LA~phei~tgItamhlqetlglLvTsG~~Rvi~iwd~~~ 395 (404)
T KOG1409|consen 357 LAIPHEIKTGITAMHLQETLGLLVTSGTDRVIKIWDVRS 395 (404)
T ss_pred cccccccccceeEEEhhhhccceeecCCceEEEEEechh
Confidence 333333334688898888888999999999999999975
No 253
>PRK03629 tolB translocation protein TolB; Provisional
Probab=98.53 E-value=7.8e-06 Score=54.61 Aligned_cols=72 Identities=11% Similarity=0.154 Sum_probs=49.4
Q ss_pred CeEEEEECCCCCEEEEE-eCCC--cEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecC-C--eEEEEeCCCC
Q psy14458 50 PVSALCVDPSGRLMVSG-HEDS--SCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYD-N--KLVLTDLQGT 122 (125)
Q Consensus 50 ~i~~~~~~~~~~~~~~~-~~~~--~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d-~--~i~~~~~~~~ 122 (125)
......|+|+++.++.. +.+| .|++||+.+++... +..+...+....|+|||+.|+..+.+ + .|..+|+.++
T Consensus 244 ~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~-lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g 321 (429)
T PRK03629 244 HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQ-VTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGG 321 (429)
T ss_pred CcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-ccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCC
Confidence 34467999999887754 4444 48899998776544 33344567789999999988777653 3 4555566543
No 254
>KOG1334|consensus
Probab=98.51 E-value=3.3e-07 Score=60.39 Aligned_cols=74 Identities=15% Similarity=0.230 Sum_probs=63.5
Q ss_pred CCeEEEE-ECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 49 SPVSALC-VDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~-~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
..|-++- |-|..+++++|+.-|.|.+|+-.+++.+..+++...-|+|+.-+|---.|++++-|.-|+||...+.
T Consensus 394 ~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP~~~ 468 (559)
T KOG1334|consen 394 RTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIWTPLTA 468 (559)
T ss_pred cccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccceEeccCCCCCCchhhccCCccceeeecCCcc
Confidence 3455554 4477899999999999999999999999888888889999999998899999999999999987543
No 255
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.50 E-value=1.3e-05 Score=52.63 Aligned_cols=100 Identities=16% Similarity=0.275 Sum_probs=69.7
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEe-CCCcEEEEEcCCC
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGH-EDSSCVLYDIRGS 80 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~ 80 (125)
++.+.|+.|.++|+.+++.+..++.. ....+++++++|++++.++ ..+.+.++|..+.
T Consensus 52 yv~~rdg~vsviD~~~~~~v~~i~~G---------------------~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tl 110 (369)
T PF02239_consen 52 YVANRDGTVSVIDLATGKVVATIKVG---------------------GNPRGIAVSPDGKYVYVANYEPGTVSVIDAETL 110 (369)
T ss_dssp EEEETTSEEEEEETTSSSEEEEEE-S---------------------SEEEEEEE--TTTEEEEEEEETTEEEEEETTT-
T ss_pred EEEcCCCeEEEEECCcccEEEEEecC---------------------CCcceEEEcCCCCEEEEEecCCCceeEeccccc
Confidence 45577999999999999988887643 4567899999999988776 6789999999999
Q ss_pred ceeEEeCCC-------CCceeEEEEccCCC-eEEEeecCCeEEEEeCCCC
Q psy14458 81 RPLQTFKPH-------TADVRSIRFSPSAY-YLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 81 ~~~~~~~~~-------~~~v~~~~~~~~~~-~~~~~~~d~~i~~~~~~~~ 122 (125)
+.+..+... ...+..+..+|... ++++.-..+.|.+.|....
T Consensus 111 e~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~ 160 (369)
T PF02239_consen 111 EPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDP 160 (369)
T ss_dssp -EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTS
T ss_pred cceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccc
Confidence 988877632 24567787788766 5555555688888886654
No 256
>KOG1409|consensus
Probab=98.50 E-value=1.8e-06 Score=54.94 Aligned_cols=96 Identities=22% Similarity=0.420 Sum_probs=76.9
Q ss_pred CCCCeEEEEecCc---ccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCc-eeEEeCCCCCceeEEEEccCC
Q psy14458 27 HTADVRSIHLDHY---TTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSR-PLQTFKPHTADVRSIRFSPSA 102 (125)
Q Consensus 27 ~~~~i~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~v~~~~~~~~~ 102 (125)
|.++|..+.+... .+.....+...+.+++|.|....+++|..|..+-+||+-..+ ....+.+|.+.|..+++.+.-
T Consensus 173 ~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t 252 (404)
T KOG1409|consen 173 HSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHT 252 (404)
T ss_pred cccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhh
Confidence 5666666665432 233344667899999999999999999999999999987643 344566799999999998888
Q ss_pred CeEEEeecCCeEEEEeCCCC
Q psy14458 103 YYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 103 ~~~~~~~~d~~i~~~~~~~~ 122 (125)
+.+++++.||.|.+||+...
T Consensus 253 ~~l~S~~edg~i~~w~mn~~ 272 (404)
T KOG1409|consen 253 RQLISCGEDGGIVVWNMNVK 272 (404)
T ss_pred eeeeeccCCCeEEEEeccce
Confidence 89999999999999999754
No 257
>KOG4532|consensus
Probab=98.46 E-value=1.5e-05 Score=49.43 Aligned_cols=74 Identities=12% Similarity=0.097 Sum_probs=57.5
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEEcCCC-ceeEE-eC-CCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 50 PVSALCVDPSGRLMVSGHEDSSCVLYDIRGS-RPLQT-FK-PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 50 ~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~-~~~~~-~~-~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
....++++++++++++.+....|-.|.+... +.+.. .. .....-.+..|+.+...++++..||++.+||+|...
T Consensus 160 ~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~ 236 (344)
T KOG4532|consen 160 TQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMA 236 (344)
T ss_pred ceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccc
Confidence 4789999999999999999999999988653 32222 11 223334578899999999999999999999998654
No 258
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=98.39 E-value=2.4e-05 Score=51.90 Aligned_cols=73 Identities=16% Similarity=0.221 Sum_probs=52.7
Q ss_pred CCeEEEEECCCCCEEEEEeCC---CcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEE-eecCC--eEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHED---SSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLT-GGYDN--KLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~d~--~i~~~~~~~~ 122 (125)
..+...+|+|++++++....+ ..|++||+.+++... +..+...+.+..|+||++.|+. .+.++ .|++||+.++
T Consensus 190 ~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~-~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~ 268 (417)
T TIGR02800 190 EPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREK-VASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGK 268 (417)
T ss_pred CceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEECCCCCccEEEEECCCC
Confidence 567788899999988876643 469999998875443 2234555667899999987654 44443 5888888765
No 259
>PRK00178 tolB translocation protein TolB; Provisional
Probab=98.38 E-value=2.8e-05 Score=51.90 Aligned_cols=74 Identities=15% Similarity=0.157 Sum_probs=52.2
Q ss_pred CCeEEEEECCCCCEEEEEeCC---CcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEE-eecCC--eEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHED---SSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLT-GGYDN--KLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~d~--~i~~~~~~~~ 122 (125)
..+....|+|+++.++..+.+ ..|++||+.+++... +....+.+....|+|||+.++. .+.++ .|+++|+.++
T Consensus 199 ~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~ 277 (430)
T PRK00178 199 EPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASR 277 (430)
T ss_pred CceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCCCEEEEEEccCCCceEEEEECCCC
Confidence 677888999999988765533 358999998876433 3323444557899999987764 44444 5888898765
Q ss_pred C
Q psy14458 123 M 123 (125)
Q Consensus 123 ~ 123 (125)
.
T Consensus 278 ~ 278 (430)
T PRK00178 278 Q 278 (430)
T ss_pred C
Confidence 3
No 260
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.37 E-value=4.2e-05 Score=49.76 Aligned_cols=94 Identities=14% Similarity=0.114 Sum_probs=69.4
Q ss_pred CeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeC----------CCcEEEEEc
Q psy14458 8 SSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHE----------DSSCVLYDI 77 (125)
Q Consensus 8 ~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----------~~~i~~~d~ 77 (125)
++|.+.|..+++.+..+..-. .-..+ ++|+++.++.+.. +..|.+||.
T Consensus 27 ~~v~ViD~~~~~v~g~i~~G~---------------------~P~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~ 84 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMTDGGF---------------------LPNPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDP 84 (352)
T ss_pred ceEEEEECCCCEEEEEEEccC---------------------CCcee-ECCCCCEEEEEeccccccccCCCCCEEEEEEC
Confidence 678888888777776665322 22234 8999988777655 788999999
Q ss_pred CCCceeEEeCCC-------CCceeEEEEccCCCeEEEee-c-CCeEEEEeCCCCC
Q psy14458 78 RGSRPLQTFKPH-------TADVRSIRFSPSAYYLLTGG-Y-DNKLVLTDLQGTM 123 (125)
Q Consensus 78 ~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~~~-~-d~~i~~~~~~~~~ 123 (125)
.+.+.+..+..- ......+.++|||++++... . +..+.+.|+.++.
T Consensus 85 ~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~k 139 (352)
T TIGR02658 85 QTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKA 139 (352)
T ss_pred ccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCc
Confidence 999988877631 11234689999999888766 3 7889999998764
No 261
>PRK02889 tolB translocation protein TolB; Provisional
Probab=98.36 E-value=2.9e-05 Score=51.88 Aligned_cols=73 Identities=19% Similarity=0.180 Sum_probs=47.0
Q ss_pred CCeEEEEECCCCCEEEEEeC-CCcEEEEEc--CCCceeEEeCCCCCceeEEEEccCCCeEEEeecCC---eEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHE-DSSCVLYDI--RGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDN---KLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~-~~~i~~~d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~---~i~~~~~~~~ 122 (125)
.......|+|+++.++..+. ++...+|.. .+++... +...........|+|||++++..+.++ .|.+||+.++
T Consensus 284 ~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~-lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g 362 (427)
T PRK02889 284 GIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQR-VTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATG 362 (427)
T ss_pred CCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEE-EecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCC
Confidence 34566789999988776554 455555554 4443222 221223344678999999998776544 6999998765
No 262
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=98.34 E-value=5.3e-05 Score=50.27 Aligned_cols=72 Identities=14% Similarity=0.168 Sum_probs=51.3
Q ss_pred CeEEEEECCCCCEEEEEeC-CC--cEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCC---eEEEEeCCCC
Q psy14458 50 PVSALCVDPSGRLMVSGHE-DS--SCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDN---KLVLTDLQGT 122 (125)
Q Consensus 50 ~i~~~~~~~~~~~~~~~~~-~~--~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~---~i~~~~~~~~ 122 (125)
......|+|+++.++..+. .+ .|+++|+.+++.. .+..+...+....|+|++++++..+.++ .|.++|+.++
T Consensus 279 ~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~-~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~ 356 (417)
T TIGR02800 279 IDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVR-RLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGG 356 (417)
T ss_pred CCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEE-EeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCC
Confidence 3446689999988776554 33 5788887766533 3333455667889999999998888765 7888888764
No 263
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.34 E-value=4.8e-05 Score=56.07 Aligned_cols=73 Identities=8% Similarity=0.079 Sum_probs=57.6
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeC-------------CCCCceeEEEEccCCCeEEEeecCCeEEEE
Q psy14458 51 VSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFK-------------PHTADVRSIRFSPSAYYLLTGGYDNKLVLT 117 (125)
Q Consensus 51 i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-------------~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~ 117 (125)
...+++++++..+++-..++.|++||..++....... +.-.....++++++|+++++-+.++.|++|
T Consensus 806 P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvi 885 (1057)
T PLN02919 806 PLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYL 885 (1057)
T ss_pred CceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEE
Confidence 4588999999988888899999999988765432221 112346789999999999999999999999
Q ss_pred eCCCCC
Q psy14458 118 DLQGTM 123 (125)
Q Consensus 118 ~~~~~~ 123 (125)
|++++.
T Consensus 886 d~~~~~ 891 (1057)
T PLN02919 886 DLNKGE 891 (1057)
T ss_pred ECCCCc
Confidence 998753
No 264
>KOG4714|consensus
Probab=98.27 E-value=7.8e-06 Score=50.39 Aligned_cols=98 Identities=20% Similarity=0.296 Sum_probs=65.7
Q ss_pred CeeecCCCeEEEEECCCCcc-eeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCC-CCEEEEEeCCCcEEEEEcC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRP-LQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPS-GRLMVSGHEDSSCVLYDIR 78 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~i~~~d~~ 78 (125)
++.|+.||.+.+||.+.... ...++.|. ..+.-+.|+|. +..|+++++||.+..||..
T Consensus 195 v~cgt~dg~~~l~d~rn~~~p~S~l~ahk--------------------~~i~eV~FHpk~p~~Lft~sedGslw~wdas 254 (319)
T KOG4714|consen 195 VCCGTDDGIVGLWDARNVAMPVSLLKAHK--------------------AEIWEVHFHPKNPEHLFTCSEDGSLWHWDAS 254 (319)
T ss_pred EEEecCCCeEEEEEcccccchHHHHHHhh--------------------hhhhheeccCCCchheeEecCCCcEEEEcCC
Confidence 36789999999999988743 33455666 67788888885 5789999999999999987
Q ss_pred CCc-----------------eeEE---eCC-CCCceeEE-EEccCCCeEEEeecCCeEEEEe
Q psy14458 79 GSR-----------------PLQT---FKP-HTADVRSI-RFSPSAYYLLTGGYDNKLVLTD 118 (125)
Q Consensus 79 ~~~-----------------~~~~---~~~-~~~~v~~~-~~~~~~~~~~~~~~d~~i~~~~ 118 (125)
+.- ++.. +.. ....+.++ .|.-.|..+++|+.-+.|++.+
T Consensus 255 ~~~l~i~~~~s~~s~WLsgD~v~s~i~i~~ll~~~~~SinsfDV~g~~lVcgtd~eaIyl~~ 316 (319)
T KOG4714|consen 255 TTFLSISNQASVISSWLSGDPVKSRIEITSLLPSRSLSINSFDVLGPCLVCGTDAEAIYLTR 316 (319)
T ss_pred CceEEecCccccccccccCCcccceEeeeccccccceeeeeeeccCceEEeccccceEEEec
Confidence 311 1111 000 11112222 2333678899999888888874
No 265
>KOG0309|consensus
Probab=98.27 E-value=2.1e-06 Score=59.58 Aligned_cols=103 Identities=17% Similarity=0.298 Sum_probs=77.2
Q ss_pred CeeecCCCeEEEEECCCCc-ceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSR-PLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 79 (125)
+++++-|..+..||+++.. ++..+.... ...+-++|+-....+...+..+.|++||.+.
T Consensus 130 latcsvdt~vh~wd~rSp~~p~ys~~~w~--------------------s~asqVkwnyk~p~vlasshg~~i~vwd~r~ 189 (1081)
T KOG0309|consen 130 LATCSVDTYVHAWDMRSPHRPFYSTSSWR--------------------SAASQVKWNYKDPNVLASSHGNDIFVWDLRK 189 (1081)
T ss_pred eeeccccccceeeeccCCCcceeeeeccc--------------------ccCceeeecccCcchhhhccCCceEEEeccC
Confidence 5788888889999987653 445544444 4556677776655555566777899999987
Q ss_pred C-ceeEEeCCCCCceeEEEEcc-CCCeEEEeecCCeEEEEeCCCCC
Q psy14458 80 S-RPLQTFKPHTADVRSIRFSP-SAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 80 ~-~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+ .++..+++|-..|+.+.|+. ....+.+++.|+++++||.....
T Consensus 190 gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt 235 (1081)
T KOG0309|consen 190 GSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKST 235 (1081)
T ss_pred CCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccc
Confidence 5 57778888888899998876 44577888999999999987543
No 266
>KOG2695|consensus
Probab=98.23 E-value=2.6e-06 Score=54.29 Aligned_cols=73 Identities=27% Similarity=0.323 Sum_probs=59.8
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC-----ceeEEeCCCCCceeEEEEcc-CCCeEEEeecCCeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS-----RPLQTFKPHTADVRSIRFSP-SAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~-----~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+.|-++.|...+++++.|+.+|.|...|++.+ .+...+- |...|+++..-. +++.+.+.+.+|+|++||+|.-
T Consensus 253 sDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rly-h~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~ 331 (425)
T KOG2695|consen 253 SDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLY-HDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRAT 331 (425)
T ss_pred hhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEE-cCcchhhhhhhccccceEeeccCcCceeEeeehhh
Confidence 55667778888999999999999999999874 3444444 888999887655 7889999999999999999743
No 267
>KOG4497|consensus
Probab=98.23 E-value=6.4e-06 Score=52.39 Aligned_cols=74 Identities=12% Similarity=0.189 Sum_probs=59.7
Q ss_pred CCeEEEEECCCCCEEEE-EeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEee-cCCeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLMVS-GHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGG-YDNKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~-~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~d~~i~~~~~~~~ 122 (125)
+.|.-+-|..+..+++. ...++.|.+|++...+-...+.....++.+++|+|||++|...+ .|-.|++|.+.+.
T Consensus 49 dki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~ 124 (447)
T KOG4497|consen 49 DKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQ 124 (447)
T ss_pred HHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccc
Confidence 56667778877766544 56788999999998888888887788899999999997776655 5889999998764
No 268
>KOG1275|consensus
Probab=98.23 E-value=1.3e-05 Score=56.87 Aligned_cols=69 Identities=22% Similarity=0.349 Sum_probs=57.3
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeec---------CCeEEEEeCC
Q psy14458 50 PVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGY---------DNKLVLTDLQ 120 (125)
Q Consensus 50 ~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---------d~~i~~~~~~ 120 (125)
.+.-|. .+++++++|...|.|-+-|.++-+.++++.+|.+.+..+.. +|+.+++++. |..++|||+|
T Consensus 179 ~v~imR--~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLR 254 (1118)
T KOG1275|consen 179 GVTIMR--YNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLR 254 (1118)
T ss_pred ceEEEE--ecCcEEEeecccceEEeecCCcCceeeeeeccccceeeeec--cCCeEEEeecccccccccccchhhhhhhh
Confidence 344444 36789999999999999999999999999999999987665 8888988864 6678999998
Q ss_pred CC
Q psy14458 121 GT 122 (125)
Q Consensus 121 ~~ 122 (125)
..
T Consensus 255 mm 256 (1118)
T KOG1275|consen 255 MM 256 (1118)
T ss_pred hh
Confidence 64
No 269
>KOG1912|consensus
Probab=98.21 E-value=3.4e-05 Score=54.12 Aligned_cols=103 Identities=15% Similarity=0.199 Sum_probs=79.1
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCC----CCEEEEEeCCCcEEEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPS----GRLMVSGHEDSSCVLYD 76 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~i~~~d 76 (125)
|+++.-.|+|-+||......+..+..+..++ -.++|-+. ..+++.-....++.+|+
T Consensus 82 iAsaD~~GrIil~d~~~~s~~~~l~~~~~~~--------------------qdl~W~~~rd~Srd~LlaIh~ss~lvLwn 141 (1062)
T KOG1912|consen 82 IASADISGRIILVDFVLASVINWLSHSNDSV--------------------QDLCWVPARDDSRDVLLAIHGSSTLVLWN 141 (1062)
T ss_pred EEeccccCcEEEEEehhhhhhhhhcCCCcch--------------------hheeeeeccCcchheeEEecCCcEEEEEE
Confidence 4677778999999999888888888777444 45555442 24566666778899999
Q ss_pred cCCCceeEEeCCCCCceeEEEEcc-CCCeEEEeecCCeEEEEeCCCCC
Q psy14458 77 IRGSRPLQTFKPHTADVRSIRFSP-SAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 77 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
..+|+.+...........|+.+.| |.+++..-+..|.+.+.+.-...
T Consensus 142 tdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~s 189 (1062)
T KOG1912|consen 142 TDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLS 189 (1062)
T ss_pred ccCCceeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCC
Confidence 999999988886667778899999 88888888888888777654433
No 270
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.20 E-value=9e-06 Score=34.44 Aligned_cols=28 Identities=29% Similarity=0.703 Sum_probs=25.9
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEE
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYD 76 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d 76 (125)
..+.+++|++.+.++++++.|+.+++|+
T Consensus 13 ~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 13 GPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred CceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 7889999999999999999999999995
No 271
>KOG1912|consensus
Probab=98.19 E-value=2.5e-05 Score=54.76 Aligned_cols=112 Identities=18% Similarity=0.176 Sum_probs=86.0
Q ss_pred eecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCC--CCEEEEEeCCCcEEEEEcCCC
Q psy14458 3 SGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPS--GRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 3 t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~i~~~d~~~~ 80 (125)
.-+....|.+-|..+.+.++.+..|...|+.++|.+..... -.++|. .-.+++++..|.|-+||...+
T Consensus 30 AygshslV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~----------~llS~~~~~lliAsaD~~GrIil~d~~~~ 99 (1062)
T KOG1912|consen 30 AYGSHSLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPR----------DLLSPSSSQLLIASADISGRIILVDFVLA 99 (1062)
T ss_pred EEecCceEEEEehhhhhhhhccccCccceeEEEeccCCCch----------hccCccccceeEEeccccCcEEEEEehhh
Confidence 33445678888988889999998899888888887643222 123322 346788889999999999999
Q ss_pred ceeEEeCCCCCceeEEEEcc---CC-CeEEEeecCCeEEEEeCCCCCC
Q psy14458 81 RPLQTFKPHTADVRSIRFSP---SA-YYLLTGGYDNKLVLTDLQGTMR 124 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~---~~-~~~~~~~~d~~i~~~~~~~~~~ 124 (125)
..+..+..+...+..++|-| +. .++++-..-.++.+||..+|.+
T Consensus 100 s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k 147 (1062)
T KOG1912|consen 100 SVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEK 147 (1062)
T ss_pred hhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCce
Confidence 88888888889999999877 33 5677777788999999888754
No 272
>PRK00178 tolB translocation protein TolB; Provisional
Probab=98.19 E-value=0.00014 Score=48.70 Aligned_cols=72 Identities=13% Similarity=0.089 Sum_probs=49.1
Q ss_pred CeEEEEECCCCCEEE-EEeCCC--cEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeec-C--CeEEEEeCCCC
Q psy14458 50 PVSALCVDPSGRLMV-SGHEDS--SCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGY-D--NKLVLTDLQGT 122 (125)
Q Consensus 50 ~i~~~~~~~~~~~~~-~~~~~~--~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-d--~~i~~~~~~~~ 122 (125)
......|+|+++.++ +.+.++ .|+++|+.+++.. .+..+........|+|||+.++..+. + ..|+++++.++
T Consensus 244 ~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~-~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g 321 (430)
T PRK00178 244 LNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLS-RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGG 321 (430)
T ss_pred CcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence 445689999998776 444454 5888898877643 34445555667889999988776553 3 35777777654
No 273
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.18 E-value=0.00039 Score=43.46 Aligned_cols=76 Identities=18% Similarity=0.336 Sum_probs=51.7
Q ss_pred CCCCeEEEEECCCCCEEEEEe-CCC----------cEEEEEcCCCce--------------------e---EE---e--C
Q psy14458 47 QGSPVSALCVDPSGRLMVSGH-EDS----------SCVLYDIRGSRP--------------------L---QT---F--K 87 (125)
Q Consensus 47 ~~~~i~~~~~~~~~~~~~~~~-~~~----------~i~~~d~~~~~~--------------------~---~~---~--~ 87 (125)
....|+++.++|..++|+.|+ ... -+..|.+-.+.+ + .. + .
T Consensus 146 yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~ 225 (282)
T PF15492_consen 146 YPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQ 225 (282)
T ss_pred CCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeecc
Confidence 356899999999877776654 221 245565532110 0 00 0 0
Q ss_pred -CCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 88 -PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 88 -~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
.....|..|..+|||..+++...+|.|.+|++-+-
T Consensus 226 ~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL 261 (282)
T PF15492_consen 226 GQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSL 261 (282)
T ss_pred ccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcc
Confidence 12456889999999999999999999999998653
No 274
>KOG3621|consensus
Probab=98.18 E-value=1.4e-05 Score=55.06 Aligned_cols=101 Identities=19% Similarity=0.288 Sum_probs=73.8
Q ss_pred CeeecCCCeEEEEECCCCcceee-ecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQT-FKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 79 (125)
++.|+.-|.+++|+...++.... ..+.. ..+..++++++..+++.|+..|.|.++.+..
T Consensus 48 l~~GsS~G~lyl~~R~~~~~~~~~~~~~~--------------------~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~ 107 (726)
T KOG3621|consen 48 LAMGSSAGSVYLYNRHTGEMRKLKNEGAT--------------------GITCVRSVSSVEYLVAAGTASGRVSVFQLNK 107 (726)
T ss_pred EEEecccceEEEEecCchhhhcccccCcc--------------------ceEEEEEecchhHhhhhhcCCceEEeehhhc
Confidence 35677778888888655443221 11111 4567778899999999999999999998876
Q ss_pred Cce---eE--EeC-CCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 80 SRP---LQ--TFK-PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 80 ~~~---~~--~~~-~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
+.+ .. ... .|+..|++++|++++.-+.+|-..|+|..-.+.+
T Consensus 108 ~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 108 ELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred cCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 421 11 121 3678899999999999999999999998887765
No 275
>KOG4640|consensus
Probab=98.18 E-value=2e-05 Score=53.82 Aligned_cols=52 Identities=25% Similarity=0.460 Sum_probs=42.3
Q ss_pred CCeE-EEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeC-CCCCceeEEEEcc
Q psy14458 49 SPVS-ALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFK-PHTADVRSIRFSP 100 (125)
Q Consensus 49 ~~i~-~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~v~~~~~~~ 100 (125)
..++ +++|.|+|+.++.|-.||+|++.|+.++..+..+. .....|.++.|.+
T Consensus 62 ~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 62 ENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVSFLFSVETDISKGIWDR 115 (665)
T ss_pred CccceeeeecCCCCEEEEEecCCeEEEEEccCCCceeccccccccchheeeccc
Confidence 5555 99999999999999999999999999988777632 2455677777753
No 276
>KOG2041|consensus
Probab=98.17 E-value=1.1e-05 Score=56.09 Aligned_cols=115 Identities=6% Similarity=0.059 Sum_probs=81.1
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
++.|+.||.+++.-+.+...-....+ -.....+. ......+|+..|..+.|+.+...+-+.+.+|.|-+|-+.++
T Consensus 29 IAcgG~dGlLKVlKl~t~t~d~~~~g-laa~snLs----mNQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykg 103 (1189)
T KOG2041|consen 29 IACGGADGLLKVLKLGTDTTDLNKSG-LAAASNLS----MNQTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKG 103 (1189)
T ss_pred EEeccccceeEEEEccccCCcccccc-cccccccc----hhhhhccCcceEEEEEeccccccccccCCCceEEEEeeecc
Confidence 47889999999998876543222221 11111111 11223356688999999999999999999999999999988
Q ss_pred ceeEEeCC--CCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 81 RPLQTFKP--HTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 81 ~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
+....+.. .++.|.+++|+.||.-|...-.||.|.+=.+.
T Consensus 104 sW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvd 145 (1189)
T KOG2041|consen 104 SWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVD 145 (1189)
T ss_pred cHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeec
Confidence 76555442 34568899999999999888888887664443
No 277
>KOG4190|consensus
Probab=98.17 E-value=2e-06 Score=58.19 Aligned_cols=79 Identities=18% Similarity=0.185 Sum_probs=62.5
Q ss_pred ccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC-------CceeEEeCCCCCceeEEEEccCCCeEEEeecCC
Q psy14458 40 TTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRG-------SRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDN 112 (125)
Q Consensus 40 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~ 112 (125)
.......|...|..++--.+.+-+++++.|++|++|.++. ..+..++..|+.+|+.+.|-.+-+.++++ |+
T Consensus 727 rL~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~ 804 (1034)
T KOG4190|consen 727 RLCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DG 804 (1034)
T ss_pred eeecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cC
Confidence 3344456667888877777788899999999999999975 23566778999999999998887777654 78
Q ss_pred eEEEEeCC
Q psy14458 113 KLVLTDLQ 120 (125)
Q Consensus 113 ~i~~~~~~ 120 (125)
.|.+||.-
T Consensus 805 giHlWDPF 812 (1034)
T KOG4190|consen 805 GIHLWDPF 812 (1034)
T ss_pred cceeeccc
Confidence 89999963
No 278
>PRK01029 tolB translocation protein TolB; Provisional
Probab=98.13 E-value=0.00016 Score=48.47 Aligned_cols=73 Identities=14% Similarity=0.156 Sum_probs=48.1
Q ss_pred eEEEEECCCCCEEEEEe-CCCcEEEE--EcCC-CceeEEeCCCCCceeEEEEccCCCeEEEeecC---CeEEEEeCCCCC
Q psy14458 51 VSALCVDPSGRLMVSGH-EDSSCVLY--DIRG-SRPLQTFKPHTADVRSIRFSPSAYYLLTGGYD---NKLVLTDLQGTM 123 (125)
Q Consensus 51 i~~~~~~~~~~~~~~~~-~~~~i~~~--d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d---~~i~~~~~~~~~ 123 (125)
....+|+|+|+.++..+ .+|...+| ++.. +.....+..+...+....|+|||+.|+..+.+ ..|.+||+.++.
T Consensus 283 ~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~ 362 (428)
T PRK01029 283 QGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGR 362 (428)
T ss_pred cCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCC
Confidence 45679999998776655 45654444 4432 22233344444566788999999988876543 468999987653
No 279
>KOG1354|consensus
Probab=98.13 E-value=2.8e-05 Score=49.78 Aligned_cols=120 Identities=14% Similarity=0.253 Sum_probs=80.4
Q ss_pred CeeecCCCeEEEEECCCCccee---ee--cCCCCCeEEEEec-----------CcccccccCCCCCeEEEEECCCCCEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQ---TF--KPHTADVRSIHLD-----------HYTTEAGTRQGSPVSALCVDPSGRLMV 64 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~---~~--~~~~~~i~~~~~~-----------~~~~~~~~~~~~~i~~~~~~~~~~~~~ 64 (125)
|+...+|.+|++|-+....... .+ .+....+.+++.. ........+|.-.|+++.++.+++.++
T Consensus 101 FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~l 180 (433)
T KOG1354|consen 101 FLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFL 180 (433)
T ss_pred EEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEe
Confidence 3567899999999886432111 11 1122333333321 122333447778899999999999888
Q ss_pred EEeCCCcEEEEEcCCCc---eeEEeCCCCC-----ceeEEEEcc-CCCeEEEeecCCeEEEEeCCC
Q psy14458 65 SGHEDSSCVLYDIRGSR---PLQTFKPHTA-----DVRSIRFSP-SAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 65 ~~~~~~~i~~~d~~~~~---~~~~~~~~~~-----~v~~~~~~~-~~~~~~~~~~d~~i~~~~~~~ 121 (125)
++ +|=.|.+|++.-.. .+..+++++. -|++..|+| ...+++-.+..|+|++.|||.
T Consensus 181 SA-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~ 245 (433)
T KOG1354|consen 181 SA-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQ 245 (433)
T ss_pred ec-cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechh
Confidence 88 57889999986432 2344455543 477889999 457778888999999999984
No 280
>PRK04792 tolB translocation protein TolB; Provisional
Probab=98.12 E-value=0.00012 Score=49.27 Aligned_cols=76 Identities=18% Similarity=0.201 Sum_probs=51.5
Q ss_pred CCCCCeEEEEECCCCCEEEEEeC-CC--cEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEE-eecCCe--EEEEeC
Q psy14458 46 RQGSPVSALCVDPSGRLMVSGHE-DS--SCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLT-GGYDNK--LVLTDL 119 (125)
Q Consensus 46 ~~~~~i~~~~~~~~~~~~~~~~~-~~--~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~d~~--i~~~~~ 119 (125)
.....+....|+|+++.++..+. ++ .|+++|+.+++... +....+......|+|||+.|+. .+.++. |+++|+
T Consensus 215 ~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl 293 (448)
T PRK04792 215 RSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK-VTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDI 293 (448)
T ss_pred cCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEEC
Confidence 34456778999999988876543 33 58899988776432 2222333457899999997765 455564 778888
Q ss_pred CCC
Q psy14458 120 QGT 122 (125)
Q Consensus 120 ~~~ 122 (125)
.++
T Consensus 294 ~tg 296 (448)
T PRK04792 294 ATK 296 (448)
T ss_pred CCC
Confidence 765
No 281
>KOG4532|consensus
Probab=98.11 E-value=0.00028 Score=44.06 Aligned_cols=75 Identities=19% Similarity=0.256 Sum_probs=56.7
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCc-eeE----EeCCCCCceeEEEEccCC--CeEEEeecCCeEEEEeCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSR-PLQ----TFKPHTADVRSIRFSPSA--YYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~-~~~----~~~~~~~~v~~~~~~~~~--~~~~~~~~d~~i~~~~~~~ 121 (125)
+.--+..|+.....++++..||++.|||++... +.. .-..|++.++.+.|+|-| .+|.-.=+-+.+.+.|+|+
T Consensus 204 D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~ 283 (344)
T KOG4532|consen 204 DHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRN 283 (344)
T ss_pred CCceeeeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEccc
Confidence 444577899999999999999999999998732 222 223588999999999844 3555555677899999987
Q ss_pred CC
Q psy14458 122 TM 123 (125)
Q Consensus 122 ~~ 123 (125)
..
T Consensus 284 ~~ 285 (344)
T KOG4532|consen 284 YV 285 (344)
T ss_pred Cc
Confidence 64
No 282
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=98.10 E-value=0.00026 Score=38.35 Aligned_cols=88 Identities=18% Similarity=0.255 Sum_probs=59.7
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
|+.|++|..|++|+- ...+..+... ..+++++-... ..++-+.++|+|-+|+- .
T Consensus 18 LlvGs~D~~IRvf~~--~e~~~Ei~e~---------------------~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~--~ 71 (111)
T PF14783_consen 18 LLVGSDDFEIRVFKG--DEIVAEITET---------------------DKVTSLCSLGG-GRFAYALANGTVGVYDR--S 71 (111)
T ss_pred EEEecCCcEEEEEeC--CcEEEEEecc---------------------cceEEEEEcCC-CEEEEEecCCEEEEEeC--c
Confidence 578999999999984 3455555533 46677766655 66888999999999974 3
Q ss_pred ceeEEeCCCCCceeEEEEcc-C--C-CeEEEeecCCeEE
Q psy14458 81 RPLQTFKPHTADVRSIRFSP-S--A-YYLLTGGYDNKLV 115 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~-~--~-~~~~~~~~d~~i~ 115 (125)
+.+...+ .+..+.++.+.. + | .-|++|..+|.|-
T Consensus 72 ~RlWRiK-SK~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 72 QRLWRIK-SKNQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred ceeeeec-cCCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 3343344 344466665433 3 3 4788999988874
No 283
>PRK01029 tolB translocation protein TolB; Provisional
Probab=98.09 E-value=0.00026 Score=47.49 Aligned_cols=73 Identities=16% Similarity=0.197 Sum_probs=51.6
Q ss_pred CCeEEEEECCCCCEEEEEeCC---CcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeec---CCeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHED---SSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGY---DNKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---d~~i~~~~~~~~ 122 (125)
..+....|+|+++.++....+ ..|.+||+.+++... +......+....|+|||+.|+..+. +..|.++|+.++
T Consensus 327 ~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~-Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g 405 (428)
T PRK01029 327 RNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQ-LTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLITK 405 (428)
T ss_pred CCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEE-ccCCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence 456678999999988766543 358999998876543 3323345677899999988765432 456888888765
No 284
>PRK04792 tolB translocation protein TolB; Provisional
Probab=98.09 E-value=0.00026 Score=47.76 Aligned_cols=71 Identities=15% Similarity=0.141 Sum_probs=48.1
Q ss_pred eEEEEECCCCCEEEE-EeCCCc--EEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeec-C--CeEEEEeCCCC
Q psy14458 51 VSALCVDPSGRLMVS-GHEDSS--CVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGY-D--NKLVLTDLQGT 122 (125)
Q Consensus 51 i~~~~~~~~~~~~~~-~~~~~~--i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-d--~~i~~~~~~~~ 122 (125)
.....|+|+++.++. .+.++. |+++|+.+++.. .+..+........|+||++.++..+. + ..|+++|+.++
T Consensus 264 ~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~-~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g 340 (448)
T PRK04792 264 NGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKALT-RITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASG 340 (448)
T ss_pred cCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCeE-ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence 346789999987754 556665 788888776543 34444455667899999998876553 3 34666677654
No 285
>KOG1354|consensus
Probab=98.08 E-value=3.8e-05 Score=49.21 Aligned_cols=113 Identities=21% Similarity=0.302 Sum_probs=73.2
Q ss_pred eeecCCCeEEEEECCCCcc----eeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEc
Q psy14458 2 VSGHEDSSCVLYDIRGSRP----LQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDI 77 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~ 77 (125)
+-++..|+|++-|++.... ...+.....+... .....--..|..+.|+.+|+++++-+ --+|++||+
T Consensus 230 ~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~r--------sffseiIsSISDvKFs~sGryilsRD-yltvk~wD~ 300 (433)
T KOG1354|consen 230 VYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSR--------SFFSEIISSISDVKFSHSGRYILSRD-YLTVKLWDL 300 (433)
T ss_pred EEecCCCcEEEeechhhhhhcchhhhhccccCCcch--------hhHHHHhhhhhceEEccCCcEEEEec-cceeEEEec
Confidence 4567778888888874321 1112222211110 00001115788999999999998873 467999999
Q ss_pred -CCCceeEEeCCCC------------Cce---eEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 78 -RGSRPLQTFKPHT------------ADV---RSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 78 -~~~~~~~~~~~~~------------~~v---~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+..+++..+..|. ..| ..++|+.++.++.+|+....++++++..+.
T Consensus 301 nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~~~~gs 362 (433)
T KOG1354|consen 301 NMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFNLARGS 362 (433)
T ss_pred cccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEecccccceEEEecCCCCc
Confidence 5566666665442 122 346888889999999999999999965543
No 286
>KOG1334|consensus
Probab=98.06 E-value=7.9e-06 Score=54.16 Aligned_cols=76 Identities=20% Similarity=0.403 Sum_probs=66.1
Q ss_pred ccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeC-CCCCceeEEEEcc--CCCeEEEeecCCeEEEEeC
Q psy14458 44 GTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFK-PHTADVRSIRFSP--SAYYLLTGGYDNKLVLTDL 119 (125)
Q Consensus 44 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~v~~~~~~~--~~~~~~~~~~d~~i~~~~~ 119 (125)
+..|..-+..+.|...|..+++|+.|..|-+||+..+.....|. +|...|..-.|-| +.+.+++++.||.+++-.+
T Consensus 138 L~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i 216 (559)
T KOG1334|consen 138 LNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEI 216 (559)
T ss_pred ccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeeee
Confidence 34677889999999999999999999999999999988877776 7998888888988 5578999999999988654
No 287
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.02 E-value=3.3e-05 Score=52.27 Aligned_cols=57 Identities=28% Similarity=0.412 Sum_probs=45.7
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 79 (125)
|+.|+.||+|.+||...+..... + .. -..+.++|+|+|..++.|+..|.+.+||...
T Consensus 274 LvlGC~DgSiiLyD~~~~~t~~~-k-a~--------------------~~P~~iaWHp~gai~~V~s~qGelQ~FD~AL 330 (545)
T PF11768_consen 274 LVLGCEDGSIILYDTTRGVTLLA-K-AE--------------------FIPTLIAWHPDGAIFVVGSEQGELQCFDMAL 330 (545)
T ss_pred EEEEecCCeEEEEEcCCCeeeee-e-ec--------------------ccceEEEEcCCCcEEEEEcCCceEEEEEeec
Confidence 57899999999999876543322 1 12 4568899999999999999999999999863
No 288
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.02 E-value=0.00035 Score=45.94 Aligned_cols=98 Identities=16% Similarity=0.180 Sum_probs=61.1
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCc
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSR 81 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 81 (125)
+.++.++.+.-+|..+++.+..+.... ........ ++..++.++.++.++.+|..+++
T Consensus 69 ~v~~~~g~v~a~d~~tG~~~W~~~~~~--------------------~~~~~p~v--~~~~v~v~~~~g~l~ald~~tG~ 126 (377)
T TIGR03300 69 YAADADGTVVALDAETGKRLWRVDLDE--------------------RLSGGVGA--DGGLVFVGTEKGEVIALDAEDGK 126 (377)
T ss_pred EEECCCCeEEEEEccCCcEeeeecCCC--------------------CcccceEE--cCCEEEEEcCCCEEEEEECCCCc
Confidence 445666777777777777665544222 10111122 46677888899999999999998
Q ss_pred eeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 82 PLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 82 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.+...... ..+.+.... .+..++.++.++.++.+|.+++.
T Consensus 127 ~~W~~~~~-~~~~~~p~v-~~~~v~v~~~~g~l~a~d~~tG~ 166 (377)
T TIGR03300 127 ELWRAKLS-SEVLSPPLV-ANGLVVVRTNDGRLTALDAATGE 166 (377)
T ss_pred EeeeeccC-ceeecCCEE-ECCEEEEECCCCeEEEEEcCCCc
Confidence 87766532 222211111 34466777789999999987653
No 289
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=98.01 E-value=3.8e-05 Score=35.21 Aligned_cols=33 Identities=27% Similarity=0.416 Sum_probs=29.3
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCce
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRP 82 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 82 (125)
..|.+++|+|+..+++.++.+|.|.++.+ +++.
T Consensus 12 ~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr 44 (47)
T PF12894_consen 12 SRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR 44 (47)
T ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence 67899999999999999999999999987 4443
No 290
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.01 E-value=0.00018 Score=47.30 Aligned_cols=58 Identities=16% Similarity=0.094 Sum_probs=42.3
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEE
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLT 117 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~ 117 (125)
.+..++.++.+|.++++|..+++.+..++.+...+..--...++ .|+.++.||.|+.+
T Consensus 319 ~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~~~-~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 319 VGGYLVVGDFEGYLHWLSREDGSFVARLKTDGSGIASPPVVVGD-GLLVQTRDGDLYAF 376 (377)
T ss_pred ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCccccCCEEECC-EEEEEeCCceEEEe
Confidence 35688889999999999999999988887555433322112243 57888899998765
No 291
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=97.97 E-value=0.0012 Score=43.26 Aligned_cols=71 Identities=14% Similarity=0.111 Sum_probs=56.7
Q ss_pred EEEEECCCCCEEEEEe----------CCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCC-eEEEee-cCCeEEEEeC
Q psy14458 52 SALCVDPSGRLMVSGH----------EDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAY-YLLTGG-YDNKLVLTDL 119 (125)
Q Consensus 52 ~~~~~~~~~~~~~~~~----------~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~-~d~~i~~~~~ 119 (125)
.-++++|+++.++... ..+.|.++|..+++.+..+. -...+..+.++||++ +++..+ .++.|.+.|.
T Consensus 251 q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~-vG~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~ 329 (352)
T TIGR02658 251 QQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIE-LGHEIDSINVSQDAKPLLYALSTGDKTLYIFDA 329 (352)
T ss_pred eeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEe-CCCceeeEEECCCCCeEEEEeCCCCCcEEEEEC
Confidence 3499999988777632 22579999999999998887 355788999999999 877666 5788999998
Q ss_pred CCCC
Q psy14458 120 QGTM 123 (125)
Q Consensus 120 ~~~~ 123 (125)
.++.
T Consensus 330 ~t~k 333 (352)
T TIGR02658 330 ETGK 333 (352)
T ss_pred cCCe
Confidence 7763
No 292
>KOG4649|consensus
Probab=97.91 E-value=0.00046 Score=43.05 Aligned_cols=72 Identities=11% Similarity=0.135 Sum_probs=54.2
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCcee-EEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVR-SIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
..+.+-+.- -+++++.|+..|.+++.+.++++....+..- +.|. .....+++..|..|++|+..+..|.++.
T Consensus 53 ~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~-~~vk~~a~~d~~~glIycgshd~~~yalD~~~~ 125 (354)
T KOG4649|consen 53 VRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVIL-ETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTY 125 (354)
T ss_pred ceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeeh-hhhccceEEcCCCceEEEecCCCcEEEeccccc
Confidence 444443333 4778999999999999999999888777633 2232 2445679999999999999999998753
No 293
>KOG1275|consensus
Probab=97.89 E-value=0.00053 Score=49.24 Aligned_cols=118 Identities=13% Similarity=0.163 Sum_probs=80.6
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCC----------------------------CCCeE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQ----------------------------GSPVS 52 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------------------------~~~i~ 52 (125)
|.+|...|+|.+-|..+.+.+..+..|.+.|......+......... ...-.
T Consensus 190 lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfDv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~ 269 (1118)
T KOG1275|consen 190 LFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFDVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQ 269 (1118)
T ss_pred EEeecccceEEeecCCcCceeeeeeccccceeeeeccCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCch
Confidence 45788889999999999999999999998888777655332222100 01113
Q ss_pred EEEECCCC-CEEEEEeCCCcEEEEEcCC---C-ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEe
Q psy14458 53 ALCVDPSG-RLMVSGHEDSSCVLYDIRG---S-RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTD 118 (125)
Q Consensus 53 ~~~~~~~~-~~~~~~~~~~~i~~~d~~~---~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~ 118 (125)
-+.|+|.- ..++..+..|...+.|..+ . -...-+..-...+..++++++++.++.|-.+|.|.+|.
T Consensus 270 flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 270 FLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred hhhhcccccceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence 34455654 4566777777777777332 2 11222223345588999999999999999999999996
No 294
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.88 E-value=0.00094 Score=49.60 Aligned_cols=74 Identities=15% Similarity=0.202 Sum_probs=52.9
Q ss_pred CCeEEEEECCCCCE-EEEEeCCCcEEEEEcCCCceeEE-------------eCCC--------CCceeEEEEccCCCeEE
Q psy14458 49 SPVSALCVDPSGRL-MVSGHEDSSCVLYDIRGSRPLQT-------------FKPH--------TADVRSIRFSPSAYYLL 106 (125)
Q Consensus 49 ~~i~~~~~~~~~~~-~~~~~~~~~i~~~d~~~~~~~~~-------------~~~~--------~~~v~~~~~~~~~~~~~ 106 (125)
.....++++|++.. +++-..++.|++||+.++..... +... -.....++++++|.+++
T Consensus 740 ~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYV 819 (1057)
T PLN02919 740 AQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYV 819 (1057)
T ss_pred cCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEE
Confidence 34678999999874 45556678999999876542211 0000 11235789999999999
Q ss_pred EeecCCeEEEEeCCCC
Q psy14458 107 TGGYDNKLVLTDLQGT 122 (125)
Q Consensus 107 ~~~~d~~i~~~~~~~~ 122 (125)
+-+.++.|++||..++
T Consensus 820 ADs~N~rIrviD~~tg 835 (1057)
T PLN02919 820 ADSYNHKIKKLDPATK 835 (1057)
T ss_pred EECCCCEEEEEECCCC
Confidence 9999999999998754
No 295
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=97.87 E-value=0.00032 Score=42.93 Aligned_cols=97 Identities=15% Similarity=0.168 Sum_probs=63.5
Q ss_pred CCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEE
Q psy14458 6 EDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQT 85 (125)
Q Consensus 6 ~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~ 85 (125)
.++.|..||+++++.+....... ++ ....+. ..+.+..++.++.++.++.+|..+++.+..
T Consensus 1 ~~g~l~~~d~~tG~~~W~~~~~~-~~-----------------~~~~~~-~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~ 61 (238)
T PF13360_consen 1 DDGTLSALDPRTGKELWSYDLGP-GI-----------------GGPVAT-AVPDGGRVYVASGDGNLYALDAKTGKVLWR 61 (238)
T ss_dssp -TSEEEEEETTTTEEEEEEECSS-SC-----------------SSEEET-EEEETTEEEEEETTSEEEEEETTTSEEEEE
T ss_pred CCCEEEEEECCCCCEEEEEECCC-CC-----------------CCccce-EEEeCCEEEEEcCCCEEEEEECCCCCEEEE
Confidence 37899999999999888775311 00 111211 122466677778999999999999998887
Q ss_pred eCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 86 FKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 86 ~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+.. ...+.... ..++..++.++.++.+..+|..++.
T Consensus 62 ~~~-~~~~~~~~-~~~~~~v~v~~~~~~l~~~d~~tG~ 97 (238)
T PF13360_consen 62 FDL-PGPISGAP-VVDGGRVYVGTSDGSLYALDAKTGK 97 (238)
T ss_dssp EEC-SSCGGSGE-EEETTEEEEEETTSEEEEEETTTSC
T ss_pred eec-ccccccee-eecccccccccceeeeEecccCCcc
Confidence 774 33322211 2244556666678899999987764
No 296
>KOG3914|consensus
Probab=97.83 E-value=5.4e-05 Score=49.00 Aligned_cols=40 Identities=25% Similarity=0.347 Sum_probs=32.9
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeC
Q psy14458 47 QGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFK 87 (125)
Q Consensus 47 ~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 87 (125)
|...|..+++-++.. |++++.|+++++||+++++.+..+.
T Consensus 193 H~eFVS~isl~~~~~-LlS~sGD~tlr~Wd~~sgk~L~t~d 232 (390)
T KOG3914|consen 193 HKEFVSTISLTDNYL-LLSGSGDKTLRLWDITSGKLLDTCD 232 (390)
T ss_pred cHhheeeeeeccCce-eeecCCCCcEEEEecccCCcccccc
Confidence 338899999887665 8999999999999999988776554
No 297
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=97.79 E-value=0.00049 Score=42.12 Aligned_cols=100 Identities=18% Similarity=0.116 Sum_probs=65.2
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCc
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSR 81 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 81 (125)
++++.++.+..||+.+|+.+..+.... ++ ... . ...+..++.++.++.++.+|..+++
T Consensus 40 ~~~~~~~~l~~~d~~tG~~~W~~~~~~-~~-----------------~~~--~--~~~~~~v~v~~~~~~l~~~d~~tG~ 97 (238)
T PF13360_consen 40 YVASGDGNLYALDAKTGKVLWRFDLPG-PI-----------------SGA--P--VVDGGRVYVGTSDGSLYALDAKTGK 97 (238)
T ss_dssp EEEETTSEEEEEETTTSEEEEEEECSS-CG-----------------GSG--E--EEETTEEEEEETTSEEEEEETTTSC
T ss_pred EEEcCCCEEEEEECCCCCEEEEeeccc-cc-----------------cce--e--eecccccccccceeeeEecccCCcc
Confidence 455688889999998898877766422 11 011 1 1135566777788899999999999
Q ss_pred eeEEe-CCCC---CceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 82 PLQTF-KPHT---ADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 82 ~~~~~-~~~~---~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.+... .... ..........++..++.+..++.+..+|++++.
T Consensus 98 ~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~ 143 (238)
T PF13360_consen 98 VLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGK 143 (238)
T ss_dssp EEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTE
T ss_pred eeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCc
Confidence 88874 3221 111122233357788888889999999988764
No 298
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.79 E-value=0.00022 Score=32.70 Aligned_cols=30 Identities=17% Similarity=0.361 Sum_probs=27.8
Q ss_pred CCceeEEEEccCCCeEEEeecCCeEEEEeC
Q psy14458 90 TADVRSIRFSPSAYYLLTGGYDNKLVLTDL 119 (125)
Q Consensus 90 ~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~ 119 (125)
...|.+++|+|...+++.++.+|.|.++.+
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl 40 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL 40 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC
Confidence 456899999999999999999999999988
No 299
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.79 E-value=0.0018 Score=46.43 Aligned_cols=69 Identities=19% Similarity=0.293 Sum_probs=50.8
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEe
Q psy14458 48 GSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTD 118 (125)
Q Consensus 48 ~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~ 118 (125)
+....|++-..+| +++.|+.+|-||+||-...+.-..+.+...+|.+|..+.||+++++.+..- +.+++
T Consensus 577 ~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~ty-LlLi~ 645 (794)
T PF08553_consen 577 KNNFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATCKTY-LLLID 645 (794)
T ss_pred CCCceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEeecce-EEEEE
Confidence 3456777776655 689999999999999433233334556788999999999999998887654 44444
No 300
>KOG2444|consensus
Probab=97.78 E-value=0.0002 Score=43.46 Aligned_cols=63 Identities=16% Similarity=0.150 Sum_probs=48.3
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEeCCCC-CceeEEEEccCCCeEEEe--ecCCeEEEEeCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHT-ADVRSIRFSPSAYYLLTG--GYDNKLVLTDLQG 121 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~--~~d~~i~~~~~~~ 121 (125)
++.+..+++.+|.|+.|+...++.+.....|. ..+.....+..++++... |.|..++.|++..
T Consensus 113 ~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 113 DSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred ccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence 44578899999999999998888777666676 455555556667777777 8888888888753
No 301
>PRK04043 tolB translocation protein TolB; Provisional
Probab=97.78 E-value=0.0043 Score=41.70 Aligned_cols=74 Identities=9% Similarity=0.008 Sum_probs=46.8
Q ss_pred CCeEEEEECCCCCEEEE-EeCC--CcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeec-CC--eEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLMVS-GHED--SSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGY-DN--KLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~-~~~~--~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-d~--~i~~~~~~~~ 122 (125)
.......|+|++..++. .+.+ ..|+++|+.+++.. .+..+........|+|||+.|+-.+. .+ .|.+.|+.++
T Consensus 233 g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~-~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g 311 (419)
T PRK04043 233 GMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLT-QITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSG 311 (419)
T ss_pred CcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcEE-EcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence 44556789999976654 3333 45888888776533 34333333345689999987766653 23 5777787655
Q ss_pred C
Q psy14458 123 M 123 (125)
Q Consensus 123 ~ 123 (125)
.
T Consensus 312 ~ 312 (419)
T PRK04043 312 S 312 (419)
T ss_pred C
Confidence 3
No 302
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=97.74 E-value=0.0016 Score=35.39 Aligned_cols=67 Identities=18% Similarity=0.218 Sum_probs=46.6
Q ss_pred eEEEEECC---CC-CEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 51 VSALCVDP---SG-RLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 51 i~~~~~~~---~~-~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
|+++++.. ++ +.|+.|++|..|++|+ ..+.+.++. ....|.++.-... ..++-+-.+|+|-+|+...
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~--~~e~~~Ei~-e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~ 72 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFK--GDEIVAEIT-ETDKVTSLCSLGG-GRFAYALANGTVGVYDRSQ 72 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEe--CCcEEEEEe-cccceEEEEEcCC-CEEEEEecCCEEEEEeCcc
Confidence 44555544 33 7899999999999995 456677776 4456777766655 4577777888887776543
No 303
>KOG1645|consensus
Probab=97.69 E-value=0.00028 Score=46.19 Aligned_cols=59 Identities=14% Similarity=0.280 Sum_probs=48.7
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCC-CEEEEEeCCCcEEEEEcCCC
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSG-RLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~d~~~~ 80 (125)
..++.+++|+|.|+++......+..+ ..+++++|..+. +++..|...|.|.+||.+..
T Consensus 210 ~~asl~nkiki~dlet~~~vssy~a~---------------------~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~ 268 (463)
T KOG1645|consen 210 GLASLGNKIKIMDLETSCVVSSYIAY---------------------NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQP 268 (463)
T ss_pred eeeccCceEEEEecccceeeeheecc---------------------CCceeeeeccCCcceeEEeccCceEEEEEccCC
Confidence 46788899999999988887777655 467888888765 78999999999999999874
Q ss_pred c
Q psy14458 81 R 81 (125)
Q Consensus 81 ~ 81 (125)
+
T Consensus 269 ~ 269 (463)
T KOG1645|consen 269 E 269 (463)
T ss_pred C
Confidence 3
No 304
>KOG2315|consensus
Probab=97.64 E-value=0.0028 Score=43.19 Aligned_cols=72 Identities=21% Similarity=0.464 Sum_probs=56.2
Q ss_pred CCCeEEEEECCCCCEEEE--EeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeec---CCeEEEEeCCCC
Q psy14458 48 GSPVSALCVDPSGRLMVS--GHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGY---DNKLVLTDLQGT 122 (125)
Q Consensus 48 ~~~i~~~~~~~~~~~~~~--~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---d~~i~~~~~~~~ 122 (125)
..+|.++.|+|++..++. |-.-..+.++|++ +..+..+. .++-+++.|+|.|++++.++. -|.+-+||+.+.
T Consensus 270 ~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df~--egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~ 346 (566)
T KOG2315|consen 270 EGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDFP--EGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNR 346 (566)
T ss_pred CCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeCC--CCCccceEECCCCCEEEEeecCCCCCceEEEeccch
Confidence 579999999999976644 5566778999875 55565554 456678999999999988775 588999998763
No 305
>KOG0309|consensus
Probab=97.62 E-value=0.00037 Score=49.09 Aligned_cols=80 Identities=14% Similarity=0.309 Sum_probs=62.8
Q ss_pred CCCCCeEEEEECCCC-CEEEEEeCCCcEEEEEcCCC-ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 46 RQGSPVSALCVDPSG-RLMVSGHEDSSCVLYDIRGS-RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 46 ~~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.|+..++.+-|+|+. ..+++++.|..+..||.+.. .++..+..-...-..+.|+...-.+.+.++.+.|.+||++.+.
T Consensus 112 ghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs 191 (1081)
T KOG0309|consen 112 GHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGS 191 (1081)
T ss_pred cCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCceEEEeccCCC
Confidence 355788999999875 67899999999999999874 5666665444455679999866677777888999999999876
Q ss_pred CC
Q psy14458 124 RP 125 (125)
Q Consensus 124 ~~ 125 (125)
.|
T Consensus 192 ~p 193 (1081)
T KOG0309|consen 192 TP 193 (1081)
T ss_pred cc
Confidence 54
No 306
>KOG3617|consensus
Probab=97.60 E-value=0.00023 Score=50.91 Aligned_cols=72 Identities=15% Similarity=0.227 Sum_probs=63.3
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
-.++++||+|..-.++.|=..|.+.+|...+.+.......|..++.-+.|+|+|..+.++-.=|.+.+|...
T Consensus 60 ~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 60 VHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred eehhhhccChHHHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 456789999999889999999999999877766665566899999999999999999999999999999765
No 307
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=97.58 E-value=0.00049 Score=43.93 Aligned_cols=78 Identities=15% Similarity=0.305 Sum_probs=58.6
Q ss_pred cccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCc---eeEEeCCCCC-----ceeEEEEccC-CCeEEEeecCCe
Q psy14458 43 AGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSR---PLQTFKPHTA-----DVRSIRFSPS-AYYLLTGGYDNK 113 (125)
Q Consensus 43 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~---~~~~~~~~~~-----~v~~~~~~~~-~~~~~~~~~d~~ 113 (125)
...+|.-.+.++.+..+...++++ .+-.|.+|++.-.. .+..+++|+. -+++..|+|. ..++.-.+..|.
T Consensus 167 yaNaH~yhiNSiS~NsD~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~ 245 (460)
T COG5170 167 YANAHPYHINSISFNSDKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGE 245 (460)
T ss_pred ccccceeEeeeeeecCchheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCc
Confidence 345677889999999998888877 57789999986532 3444556653 4778899994 466667778899
Q ss_pred EEEEeCCC
Q psy14458 114 LVLTDLQG 121 (125)
Q Consensus 114 i~~~~~~~ 121 (125)
|++.|+|.
T Consensus 246 Ikl~DlRq 253 (460)
T COG5170 246 IKLNDLRQ 253 (460)
T ss_pred EEehhhhh
Confidence 99999984
No 308
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=97.57 E-value=0.0041 Score=40.64 Aligned_cols=73 Identities=21% Similarity=0.296 Sum_probs=53.3
Q ss_pred CCeEEEEECCCCCEEEEEeC----CCcEEEEEcCCC--c--eeEEeCCCCCceeEEEEccCCCeEEEeec-CCeEEEEeC
Q psy14458 49 SPVSALCVDPSGRLMVSGHE----DSSCVLYDIRGS--R--PLQTFKPHTADVRSIRFSPSAYYLLTGGY-DNKLVLTDL 119 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~----~~~i~~~d~~~~--~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-d~~i~~~~~ 119 (125)
....-++++|++++|.+..+ ++.|..|.+... + .+...........+++++|++++++++.. ++.+.++++
T Consensus 37 ~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l 116 (345)
T PF10282_consen 37 ENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPL 116 (345)
T ss_dssp SSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEc
Confidence 45567889999999988876 468988887664 2 23333323344567999999999998874 899999998
Q ss_pred CC
Q psy14458 120 QG 121 (125)
Q Consensus 120 ~~ 121 (125)
..
T Consensus 117 ~~ 118 (345)
T PF10282_consen 117 DD 118 (345)
T ss_dssp CT
T ss_pred cC
Confidence 75
No 309
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=97.56 E-value=0.00027 Score=45.05 Aligned_cols=76 Identities=17% Similarity=0.320 Sum_probs=53.0
Q ss_pred CCeEEEEECCCC-CEEEEEeCCCcEEEEEcCCC------ceeEEeC----------CCCCceeEEEEccCCCeEEEeecC
Q psy14458 49 SPVSALCVDPSG-RLMVSGHEDSSCVLYDIRGS------RPLQTFK----------PHTADVRSIRFSPSAYYLLTGGYD 111 (125)
Q Consensus 49 ~~i~~~~~~~~~-~~~~~~~~~~~i~~~d~~~~------~~~~~~~----------~~~~~v~~~~~~~~~~~~~~~~~d 111 (125)
.-|++..|+|.. +.+.-.+..|.|++-|++.. +.+.... .--..+..+.|+++|++|++-..
T Consensus 222 eVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy- 300 (460)
T COG5170 222 EVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY- 300 (460)
T ss_pred HHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-
Confidence 457788899976 45555678899999999842 1111111 11245677899999999988654
Q ss_pred CeEEEEeCCCCCCC
Q psy14458 112 NKLVLTDLQGTMRP 125 (125)
Q Consensus 112 ~~i~~~~~~~~~~~ 125 (125)
-++++||++....|
T Consensus 301 ltvkiwDvnm~k~p 314 (460)
T COG5170 301 LTVKIWDVNMAKNP 314 (460)
T ss_pred ceEEEEecccccCC
Confidence 57999999876654
No 310
>KOG2066|consensus
Probab=97.54 E-value=0.0014 Score=46.40 Aligned_cols=60 Identities=20% Similarity=0.397 Sum_probs=49.5
Q ss_pred CCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccC-----CCeEEEeecCCeEEEEe
Q psy14458 57 DPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPS-----AYYLLTGGYDNKLVLTD 118 (125)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~~~~~~~d~~i~~~~ 118 (125)
.-+|+++++++.||.|.|-.+-+.+....+. .+.++.+++++|+ .+.+++|+..| +.++.
T Consensus 80 ~~~Gey~asCS~DGkv~I~sl~~~~~~~~~d-f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~e 144 (846)
T KOG2066|consen 80 ILEGEYVASCSDDGKVVIGSLFTDDEITQYD-FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSE 144 (846)
T ss_pred ccCCceEEEecCCCcEEEeeccCCccceeEe-cCCcceeEEeccchhhhhhhheeecCcce-EEEeh
Confidence 4579999999999999999988887777666 5678899999997 57888888887 66654
No 311
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=97.54 E-value=0.0021 Score=40.34 Aligned_cols=67 Identities=16% Similarity=0.280 Sum_probs=48.0
Q ss_pred EEECCCCCEEEEEeCCCcEEEEEcCCC--ceeEEeCC--CC-CceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 54 LCVDPSGRLMVSGHEDSSCVLYDIRGS--RPLQTFKP--HT-ADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~i~~~d~~~~--~~~~~~~~--~~-~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
++.+++|++++.- .|..|.+-..+.. ..+..... .. ..=+.++|+||+.+++.+...|+|+++|+.+
T Consensus 3 ~~~~~~Gk~lAi~-qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g 74 (282)
T PF15492_consen 3 LALSSDGKLLAIL-QDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMG 74 (282)
T ss_pred eeecCCCcEEEEE-eccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEeccc
Confidence 4667788877766 7888888877652 22222221 11 2235799999999999999999999999874
No 312
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=97.53 E-value=0.013 Score=42.05 Aligned_cols=78 Identities=22% Similarity=0.290 Sum_probs=54.4
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC---------Cc---eeEEeC--------CCCCceeEEEEccC---CCe
Q psy14458 48 GSPVSALCVDPSGRLMVSGHEDSSCVLYDIRG---------SR---PLQTFK--------PHTADVRSIRFSPS---AYY 104 (125)
Q Consensus 48 ~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~---------~~---~~~~~~--------~~~~~v~~~~~~~~---~~~ 104 (125)
...|..+.++|+|.+++..+..|..-+.-.+. ++ ...++. .....|..+.|+|. +.+
T Consensus 84 ~f~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~ 163 (717)
T PF10168_consen 84 LFEVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSH 163 (717)
T ss_pred ceeEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCe
Confidence 36789999999999998888766533322221 11 111111 22346889999994 689
Q ss_pred EEEeecCCeEEEEeCCCCCCC
Q psy14458 105 LLTGGYDNKLVLTDLQGTMRP 125 (125)
Q Consensus 105 ~~~~~~d~~i~~~~~~~~~~~ 125 (125)
++.-..|+++++||+.....|
T Consensus 164 l~vLtsdn~lR~y~~~~~~~p 184 (717)
T PF10168_consen 164 LVVLTSDNTLRLYDISDPQHP 184 (717)
T ss_pred EEEEecCCEEEEEecCCCCCC
Confidence 999999999999999866554
No 313
>KOG2041|consensus
Probab=97.53 E-value=0.00066 Score=47.84 Aligned_cols=74 Identities=14% Similarity=0.115 Sum_probs=62.5
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCc---------------eeEEeCCCCCceeEEEEccCCCeEEEeecCCe
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSR---------------PLQTFKPHTADVRSIRFSPSAYYLLTGGYDNK 113 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~---------------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~ 113 (125)
....|+.|+.+..+++.|+.||.+++..+.+.. .-+.+.+|+..|.-+.|+.+.+-+.+.-.+|.
T Consensus 15 vkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~Gl 94 (1189)
T KOG2041|consen 15 VKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSGL 94 (1189)
T ss_pred ceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCce
Confidence 678899999999999999999999999875421 12245689999999999999999999999999
Q ss_pred EEEEeCCCC
Q psy14458 114 LVLTDLQGT 122 (125)
Q Consensus 114 i~~~~~~~~ 122 (125)
|.+|-+-.+
T Consensus 95 IiVWmlykg 103 (1189)
T KOG2041|consen 95 IIVWMLYKG 103 (1189)
T ss_pred EEEEeeecc
Confidence 999987554
No 314
>KOG2079|consensus
Probab=97.52 E-value=0.00062 Score=49.60 Aligned_cols=69 Identities=20% Similarity=0.365 Sum_probs=52.5
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCcee---EEEEccCCCeEEEeecCCeEEEEe
Q psy14458 48 GSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVR---SIRFSPSAYYLLTGGYDNKLVLTD 118 (125)
Q Consensus 48 ~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~---~~~~~~~~~~~~~~~~d~~i~~~~ 118 (125)
..++++++|+.+|..+..|-.+|.|.+||...++.+..+..|..++. .+.+..++..+.++-..|. +|.
T Consensus 130 ~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~ 201 (1206)
T KOG2079|consen 130 QGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWK 201 (1206)
T ss_pred CCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceEEEEEEeCCCcEEEEccCCCc--eEE
Confidence 47899999999999999999999999999999888887776655444 3444445555666655564 454
No 315
>KOG1832|consensus
Probab=97.51 E-value=0.00025 Score=51.00 Aligned_cols=77 Identities=12% Similarity=0.133 Sum_probs=65.3
Q ss_pred CCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCC--eEEEEeCCCC
Q psy14458 46 RQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDN--KLVLTDLQGT 122 (125)
Q Consensus 46 ~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~--~i~~~~~~~~ 122 (125)
.+....+|++|+-..+.++.|+-.|.|+++++.+|....+...|..+|+.+.-+-+|..+++.+.-. -..+|++.+.
T Consensus 1099 d~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~ 1177 (1516)
T KOG1832|consen 1099 DETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASST 1177 (1516)
T ss_pred ccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhccccc
Confidence 3457899999999999999999999999999999999999999999999999888998777655432 4677887654
No 316
>KOG0882|consensus
Probab=97.50 E-value=0.0018 Score=43.23 Aligned_cols=76 Identities=21% Similarity=0.178 Sum_probs=60.9
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC------Cce---------eEEeCCCCCceeEEEEccCCCeEEEeecCC
Q psy14458 48 GSPVSALCVDPSGRLMVSGHEDSSCVLYDIRG------SRP---------LQTFKPHTADVRSIRFSPSAYYLLTGGYDN 112 (125)
Q Consensus 48 ~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~------~~~---------~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~ 112 (125)
..+|.++.+.|.+..+++....|.|..|.... .+. +..+...+....++.|+|++..+..-+.|.
T Consensus 144 ~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~Dr 223 (558)
T KOG0882|consen 144 FSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDR 223 (558)
T ss_pred cCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCccc
Confidence 37899999999999999999999999998762 111 222223455678999999999999999999
Q ss_pred eEEEEeCCCCC
Q psy14458 113 KLVLTDLQGTM 123 (125)
Q Consensus 113 ~i~~~~~~~~~ 123 (125)
.|+++++.++.
T Consensus 224 kVR~F~~KtGk 234 (558)
T KOG0882|consen 224 KVRGFVFKTGK 234 (558)
T ss_pred EEEEEEeccch
Confidence 99999988763
No 317
>PRK04043 tolB translocation protein TolB; Provisional
Probab=97.49 E-value=0.011 Score=39.81 Aligned_cols=72 Identities=8% Similarity=-0.063 Sum_probs=49.0
Q ss_pred CeEEEEECCCCCE-EEEEeC---CCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEe-ec--CCeEEEEeCCCC
Q psy14458 50 PVSALCVDPSGRL-MVSGHE---DSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTG-GY--DNKLVLTDLQGT 122 (125)
Q Consensus 50 ~i~~~~~~~~~~~-~~~~~~---~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~--d~~i~~~~~~~~ 122 (125)
....-.|+|+++. ++..+. +..|+++|+.+++...... ..+.+....|+|||+.++.. +. +..|.++|+.++
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g 267 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTK 267 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCC
Confidence 6678999999974 554333 3459999998876544333 44556678899999766543 33 456888887655
No 318
>KOG2314|consensus
Probab=97.47 E-value=0.002 Score=44.09 Aligned_cols=72 Identities=15% Similarity=0.179 Sum_probs=54.0
Q ss_pred CCeEEEEECCCCCEEEEEe-----------CCCcEEEEEcCCCceeEEeCCCC--Ccee-EEEEccCCCeEEEeecCCeE
Q psy14458 49 SPVSALCVDPSGRLMVSGH-----------EDSSCVLYDIRGSRPLQTFKPHT--ADVR-SIRFSPSAYYLLTGGYDNKL 114 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~-----------~~~~i~~~d~~~~~~~~~~~~~~--~~v~-~~~~~~~~~~~~~~~~d~~i 114 (125)
..+.-+.|||..++|++-+ +...+.|||+++|.....|..-+ ..+. -+.||.|+++++.-.. ..|
T Consensus 250 p~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~si 328 (698)
T KOG2314|consen 250 PGVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSI 328 (698)
T ss_pred CCceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEecc-ceE
Confidence 4577889999999999865 22568999999998888887532 2233 3689999999998877 447
Q ss_pred EEEeCCC
Q psy14458 115 VLTDLQG 121 (125)
Q Consensus 115 ~~~~~~~ 121 (125)
.+++..+
T Consensus 329 sIyEtps 335 (698)
T KOG2314|consen 329 SIYETPS 335 (698)
T ss_pred EEEecCc
Confidence 7776543
No 319
>PRK02888 nitrous-oxide reductase; Validated
Probab=97.45 E-value=0.0049 Score=43.13 Aligned_cols=73 Identities=11% Similarity=0.120 Sum_probs=56.2
Q ss_pred CCCeEEEEECCCCCEEEEEe-CCCcEEEEEcCCCce------------eEEeCCCCCceeEEEEccCCCeEEEeecCCeE
Q psy14458 48 GSPVSALCVDPSGRLMVSGH-EDSSCVLYDIRGSRP------------LQTFKPHTADVRSIRFSPSAYYLLTGGYDNKL 114 (125)
Q Consensus 48 ~~~i~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i 114 (125)
+.....+.++|++++++.++ .+.++.+.|+.+.+. ....+. ...-.+..|.++|..+.+.-.|..+
T Consensus 320 GKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevev-GlGPLHTaFDg~G~aytslf~dsqv 398 (635)
T PRK02888 320 PKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPEL-GLGPLHTAFDGRGNAYTTLFLDSQI 398 (635)
T ss_pred CCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeecc-CCCcceEEECCCCCEEEeEeeccee
Confidence 36778999999999876655 578899999987543 333332 2334578899999999999999999
Q ss_pred EEEeCCC
Q psy14458 115 VLTDLQG 121 (125)
Q Consensus 115 ~~~~~~~ 121 (125)
..||+..
T Consensus 399 ~kwn~~~ 405 (635)
T PRK02888 399 VKWNIEA 405 (635)
T ss_pred EEEehHH
Confidence 9999865
No 320
>KOG4649|consensus
Probab=97.44 E-value=0.005 Score=38.64 Aligned_cols=34 Identities=21% Similarity=0.168 Sum_probs=29.1
Q ss_pred EEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeC
Q psy14458 54 LCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFK 87 (125)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 87 (125)
....+++..+..|+.|+..+..|.++..++...+
T Consensus 99 a~~d~~~glIycgshd~~~yalD~~~~~cVyksk 132 (354)
T KOG4649|consen 99 AQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSK 132 (354)
T ss_pred eEEcCCCceEEEecCCCcEEEecccccceEEecc
Confidence 3456788999999999999999999988887765
No 321
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=97.41 E-value=0.0024 Score=46.91 Aligned_cols=70 Identities=21% Similarity=0.279 Sum_probs=50.8
Q ss_pred eEEEEECCCCCEEEEEeC---CCcEEEEEcCCCceeEEeC----CCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 51 VSALCVDPSGRLMVSGHE---DSSCVLYDIRGSRPLQTFK----PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 51 i~~~~~~~~~~~~~~~~~---~~~i~~~d~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
-.+++|-|.|+++++.-. ...|-+|. ++|.....|. .....|..+.|++|+..|+....|. |.+|-..+.
T Consensus 259 e~~l~WrPsG~lIA~~q~~~~~~~VvFfE-rNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NY 335 (928)
T PF04762_consen 259 EGALSWRPSGNLIASSQRLPDRHDVVFFE-RNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNY 335 (928)
T ss_pred cCCccCCCCCCEEEEEEEcCCCcEEEEEe-cCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCC
Confidence 457899999999988764 34466665 4554443333 3456789999999999999977666 999976553
No 322
>PRK02888 nitrous-oxide reductase; Validated
Probab=97.37 E-value=0.0075 Score=42.26 Aligned_cols=61 Identities=16% Similarity=0.264 Sum_probs=43.9
Q ss_pred CCCEEEEEeCCCcEEEEEcCC-----CceeEEeCCCCCceeEEEEccCCCeEEEee-cCCeEEEEeCCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRG-----SRPLQTFKPHTADVRSIRFSPSAYYLLTGG-YDNKLVLTDLQGT 122 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~d~~i~~~~~~~~ 122 (125)
+|++... .++.|.+.|.++ .+.+..+. -....+.+.++|||+++++++ .+.++.+.|+++.
T Consensus 287 dGK~~~V--~gn~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~ 353 (635)
T PRK02888 287 AGKFKTI--GGSKVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKL 353 (635)
T ss_pred CCCEEEE--CCCEEEEEECCccccCCcceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEEEEChhh
Confidence 4444433 356799999887 34444444 556678899999999887766 5999999999764
No 323
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=97.35 E-value=0.017 Score=37.53 Aligned_cols=95 Identities=24% Similarity=0.381 Sum_probs=61.7
Q ss_pred CCCeEEEEecCc-----ccccccCCCCCeEEEEECCCCCEEEEEeC-CCcEEEEEcCC-Cce--eEEeCCCCCc------
Q psy14458 28 TADVRSIHLDHY-----TTEAGTRQGSPVSALCVDPSGRLMVSGHE-DSSCVLYDIRG-SRP--LQTFKPHTAD------ 92 (125)
Q Consensus 28 ~~~i~~~~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~i~~~d~~~-~~~--~~~~~~~~~~------ 92 (125)
.+.|.+..|++. ........+.+-+-++++++++++++++- .|.|.++-++. +.. ......|.+.
T Consensus 63 ~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ 142 (346)
T COG2706 63 EGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQ 142 (346)
T ss_pred cCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccc
Confidence 345555555542 11122233455589999999999988874 47799998866 321 1112234444
Q ss_pred ----eeEEEEccCCCeEEEee-cCCeEEEEeCCCC
Q psy14458 93 ----VRSIRFSPSAYYLLTGG-YDNKLVLTDLQGT 122 (125)
Q Consensus 93 ----v~~~~~~~~~~~~~~~~-~d~~i~~~~~~~~ 122 (125)
++...+.|+++++++.. ....|.+|++..+
T Consensus 143 ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg 177 (346)
T COG2706 143 ESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDG 177 (346)
T ss_pred cCCccceeeeCCCCCEEEEeecCCceEEEEEcccC
Confidence 88899999999998876 3556889988643
No 324
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=97.31 E-value=0.012 Score=39.08 Aligned_cols=58 Identities=14% Similarity=0.070 Sum_probs=41.8
Q ss_pred CCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeE-EEEccCCCeEEEeecCCeEEEEeC
Q psy14458 60 GRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRS-IRFSPSAYYLLTGGYDNKLVLTDL 119 (125)
Q Consensus 60 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~~d~~i~~~~~ 119 (125)
+..++.++.+|.+++.|..+++.+...+.....+.+ ..+ .+..|+.++.||.++.+++
T Consensus 335 ~g~l~v~~~~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~--~~~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 335 NGYLVVGDSEGYLHWINREDGRFVAQQKVDSSGFLSEPVV--ADDKLLIQARDGTVYAITR 393 (394)
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCcceeCCEE--ECCEEEEEeCCceEEEEeC
Confidence 567888899999999999999988777643333322 111 3447888899999988764
No 325
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=97.30 E-value=0.02 Score=37.50 Aligned_cols=76 Identities=17% Similarity=0.361 Sum_probs=53.1
Q ss_pred CCCCeEEEEECCCCCEEEEEe-CCCcEEEEEcCC-CceeE---EeC----------CCCCceeEEEEccCCCeEEEee-c
Q psy14458 47 QGSPVSALCVDPSGRLMVSGH-EDSSCVLYDIRG-SRPLQ---TFK----------PHTADVRSIRFSPSAYYLLTGG-Y 110 (125)
Q Consensus 47 ~~~~i~~~~~~~~~~~~~~~~-~~~~i~~~d~~~-~~~~~---~~~----------~~~~~v~~~~~~~~~~~~~~~~-~ 110 (125)
.+...+.++++|++.+++.+. .+|.+.++++.. +.... .+. ......+++.++|+++++++.. .
T Consensus 85 ~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG 164 (345)
T PF10282_consen 85 GGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLG 164 (345)
T ss_dssp SSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETT
T ss_pred CCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecC
Confidence 346677899999999998887 588899999976 33222 121 1224567899999999887754 4
Q ss_pred CCeEEEEeCCCC
Q psy14458 111 DNKLVLTDLQGT 122 (125)
Q Consensus 111 d~~i~~~~~~~~ 122 (125)
...|.+|++...
T Consensus 165 ~D~v~~~~~~~~ 176 (345)
T PF10282_consen 165 ADRVYVYDIDDD 176 (345)
T ss_dssp TTEEEEEEE-TT
T ss_pred CCEEEEEEEeCC
Confidence 567999988654
No 326
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=97.27 E-value=0.0075 Score=38.66 Aligned_cols=56 Identities=21% Similarity=0.364 Sum_probs=44.9
Q ss_pred EEECCCCCEEEEEe-----CCCcEEEEEcC-CCceeEEeCCCCCceeEEEEccCCCeEEEee
Q psy14458 54 LCVDPSGRLMVSGH-----EDSSCVLYDIR-GSRPLQTFKPHTADVRSIRFSPSAYYLLTGG 109 (125)
Q Consensus 54 ~~~~~~~~~~~~~~-----~~~~i~~~d~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 109 (125)
-+||++|++|++.- ..|.|-|||.. .-+.+.+|..|.-.-+.+.+.|||+.|+.+.
T Consensus 56 g~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVAN 117 (305)
T PF07433_consen 56 GVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVAN 117 (305)
T ss_pred EEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEc
Confidence 37999999988864 45789999998 5678888887776677899999997777654
No 327
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=97.26 E-value=0.0091 Score=40.53 Aligned_cols=72 Identities=19% Similarity=0.301 Sum_probs=52.1
Q ss_pred CCeEEEEECCCCCEEEEEeCC---CcEEEEEcCCCceeE-EeCCCCCceeEEEEccCCCeEEEee------cCCeEEEEe
Q psy14458 49 SPVSALCVDPSGRLMVSGHED---SSCVLYDIRGSRPLQ-TFKPHTADVRSIRFSPSAYYLLTGG------YDNKLVLTD 118 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~---~~i~~~d~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~------~d~~i~~~~ 118 (125)
..-..+.|+|.+++++.++-+ |.+.+||....-.+. .+.+.+ .+-..|+||++++.+.. .|..+.+||
T Consensus 316 ~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~~n--~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~ 393 (561)
T COG5354 316 QKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNGLN--TSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWD 393 (561)
T ss_pred cccccccccCcccEEEEecCCccccceEEeccCCceEEEEEeecCC--ceEeeccCCceEEEecCCCcccccCcceEEEE
Confidence 455677899999998886544 779999987665444 555433 23467999999987753 377899999
Q ss_pred CCCC
Q psy14458 119 LQGT 122 (125)
Q Consensus 119 ~~~~ 122 (125)
+...
T Consensus 394 v~g~ 397 (561)
T COG5354 394 VYGA 397 (561)
T ss_pred ecCc
Confidence 8654
No 328
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=97.12 E-value=0.025 Score=35.11 Aligned_cols=71 Identities=21% Similarity=0.283 Sum_probs=48.3
Q ss_pred CCeEEEEECCCCCEEEEEeCC--------CcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEE-EeecCCeEEEEeC
Q psy14458 49 SPVSALCVDPSGRLMVSGHED--------SSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLL-TGGYDNKLVLTDL 119 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~--------~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~d~~i~~~~~ 119 (125)
...+.+++.|+|++.++.... |.+..++.. ++...... .-...+.++|+|+++.++ +-+..+.|..+++
T Consensus 86 ~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~-~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~ 163 (246)
T PF08450_consen 86 NRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVAD-GLGFPNGIAFSPDGKTLYVADSFNGRIWRFDL 163 (246)
T ss_dssp EEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEE-EESSEEEEEEETTSSEEEEEETTTTEEEEEEE
T ss_pred CCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEec-CcccccceEECCcchheeecccccceeEEEec
Confidence 567899999999987776544 457777766 44333232 234467899999998665 6677888988887
Q ss_pred CC
Q psy14458 120 QG 121 (125)
Q Consensus 120 ~~ 121 (125)
..
T Consensus 164 ~~ 165 (246)
T PF08450_consen 164 DA 165 (246)
T ss_dssp ET
T ss_pred cc
Confidence 53
No 329
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=97.08 E-value=0.0033 Score=42.49 Aligned_cols=72 Identities=26% Similarity=0.422 Sum_probs=55.6
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCe---------------
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNK--------------- 113 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~--------------- 113 (125)
.++..+++||.|.+++.....+ |.+|.......+..+. | ..|..+.|+|++++|.+=+....
T Consensus 33 ~p~~~~~~SP~G~~l~~~~~~~-V~~~~g~~~~~l~~~~-~-~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~ 109 (561)
T COG5354 33 WPVAYVSESPLGTYLFSEHAAG-VECWGGPSKAKLVRFR-H-PDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNN 109 (561)
T ss_pred cchhheeecCcchheehhhccc-eEEccccchhheeeee-c-CCceecccCcccceeeeeccCCccChhhccCCccccCc
Confidence 6788999999999998886554 7889877666555555 3 45888999999999988655444
Q ss_pred EEEEeCCCCC
Q psy14458 114 LVLTDLQGTM 123 (125)
Q Consensus 114 i~~~~~~~~~ 123 (125)
+.+||..+++
T Consensus 110 ~~vwd~~sg~ 119 (561)
T COG5354 110 VFVWDIASGM 119 (561)
T ss_pred eeEEeccCce
Confidence 8899887764
No 330
>KOG2314|consensus
Probab=97.01 E-value=0.0079 Score=41.37 Aligned_cols=82 Identities=12% Similarity=0.154 Sum_probs=53.8
Q ss_pred CeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeC
Q psy14458 8 SSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFK 87 (125)
Q Consensus 8 ~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 87 (125)
..++|||+++|.....|.....+. ..-.-+.||-++++++.-.. ..|.|++...-.++-.-.
T Consensus 282 ~~l~IWDI~tG~lkrsF~~~~~~~-----------------~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Ks 343 (698)
T KOG2314|consen 282 QQLIIWDIATGLLKRSFPVIKSPY-----------------LKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLLDKKS 343 (698)
T ss_pred ceEEEEEccccchhcceeccCCCc-----------------cccceEEeccCCceeEEecc-ceEEEEecCceeeecccc
Confidence 679999999998877766422111 33456789999999887765 568889876532222111
Q ss_pred CCCCceeEEEEccCCCeEEE
Q psy14458 88 PHTADVRSIRFSPSAYYLLT 107 (125)
Q Consensus 88 ~~~~~v~~~~~~~~~~~~~~ 107 (125)
.--..|....|+|.+.+|+-
T Consensus 344 lki~gIr~FswsP~~~llAY 363 (698)
T KOG2314|consen 344 LKISGIRDFSWSPTSNLLAY 363 (698)
T ss_pred cCCccccCcccCCCcceEEE
Confidence 12345777888888776654
No 331
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=97.00 E-value=0.055 Score=36.92 Aligned_cols=74 Identities=15% Similarity=0.203 Sum_probs=61.0
Q ss_pred CCeEEEEECCCCCEEEEEeCCC-cEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDS-SCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~-~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
..|.-..+..+.+-++.|..|| .+-++|..+++... +...-+.|-++..+|+|+.++.+.....+.+.|+.++.
T Consensus 360 ~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr-~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngn 434 (668)
T COG4946 360 GGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKR-IEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGN 434 (668)
T ss_pred CceEEEEEccCCcceEEeccCCceEEEEecCCceEEE-eeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCC
Confidence 4566666776777889999999 79999988776444 55566779999999999999999999999999998874
No 332
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=97.00 E-value=0.03 Score=37.31 Aligned_cols=100 Identities=11% Similarity=0.064 Sum_probs=59.2
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCc
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSR 81 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 81 (125)
+.++.++.+.-+|..+++.+...+... ++. ..+ .+ .+..++.+..++.++.+|..+++
T Consensus 124 ~v~~~~g~l~ald~~tG~~~W~~~~~~-~~~---------------ssP----~v--~~~~v~v~~~~g~l~ald~~tG~ 181 (394)
T PRK11138 124 YIGSEKGQVYALNAEDGEVAWQTKVAG-EAL---------------SRP----VV--SDGLVLVHTSNGMLQALNESDGA 181 (394)
T ss_pred EEEcCCCEEEEEECCCCCCcccccCCC-cee---------------cCC----EE--ECCEEEEECCCCEEEEEEccCCC
Confidence 345667788888888888776654322 110 011 11 14456677788999999999999
Q ss_pred eeEEeCCCCCcee-EEEEcc--CCCeEEEeecCCeEEEEeCCCCC
Q psy14458 82 PLQTFKPHTADVR-SIRFSP--SAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 82 ~~~~~~~~~~~v~-~~~~~~--~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.+..+........ ...-+| .+..++.++.++.+..+|..++.
T Consensus 182 ~~W~~~~~~~~~~~~~~~sP~v~~~~v~~~~~~g~v~a~d~~~G~ 226 (394)
T PRK11138 182 VKWTVNLDVPSLTLRGESAPATAFGGAIVGGDNGRVSAVLMEQGQ 226 (394)
T ss_pred EeeeecCCCCcccccCCCCCEEECCEEEEEcCCCEEEEEEccCCh
Confidence 8877763211100 000122 22346667778888888877653
No 333
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=96.99 E-value=0.0059 Score=27.30 Aligned_cols=32 Identities=22% Similarity=0.352 Sum_probs=26.2
Q ss_pred CceeEEEEccCC---CeEEEeecCCeEEEEeCCCC
Q psy14458 91 ADVRSIRFSPSA---YYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 91 ~~v~~~~~~~~~---~~~~~~~~d~~i~~~~~~~~ 122 (125)
+.|+++.|+|+. .+|+..=..+.+.++|+++.
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~ 35 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN 35 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence 468899999843 58888888899999999953
No 334
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=96.97 E-value=0.08 Score=39.38 Aligned_cols=71 Identities=10% Similarity=0.124 Sum_probs=55.5
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEE----EcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEe
Q psy14458 47 QGSPVSALCVDPSGRLMVSGHEDSSCVLY----DIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTD 118 (125)
Q Consensus 47 ~~~~i~~~~~~~~~~~~~~~~~~~~i~~~----d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~ 118 (125)
....|.++.+-++...++.+..+|.|-+. +..+.. +.....-...|.+++|+||++.++..+.++++.+.+
T Consensus 74 ~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~-~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt 148 (928)
T PF04762_consen 74 PNDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDE-IEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMT 148 (928)
T ss_pred CCCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCce-eEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEe
Confidence 44789999999999999999999999888 443322 222223457899999999999999999999987764
No 335
>KOG2114|consensus
Probab=96.93 E-value=0.043 Score=39.76 Aligned_cols=76 Identities=16% Similarity=0.195 Sum_probs=54.1
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC----CceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 48 GSPVSALCVDPSGRLMVSGHEDSSCVLYDIRG----SRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 48 ~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+.++++++++.+-..++.|-.+|.|..+.-.- +....-....+.+|+.+.+..++..++-......|.+|.+.+..
T Consensus 125 ~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~ 204 (933)
T KOG2114|consen 125 PSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLSGRT 204 (933)
T ss_pred CCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEEEEecceeEEEEecCCC
Confidence 37889999999999999999999999886421 22222222356789999998888774444444568888877554
No 336
>KOG1832|consensus
Probab=96.89 E-value=0.0011 Score=47.90 Aligned_cols=99 Identities=18% Similarity=0.313 Sum_probs=72.1
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCc--EEEEEcC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSS--CVLYDIR 78 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--i~~~d~~ 78 (125)
|+.|+-.|.|++|++.+|........|. +.++-+--+.+|..+.+.+.-.. .-+|+..
T Consensus 1116 L~vG~~~Geik~~nv~sG~~e~s~ncH~--------------------SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~ 1175 (1516)
T KOG1832|consen 1116 LAVGSHAGEIKIFNVSSGSMEESVNCHQ--------------------SAVTLVEPSVDGSTQLTSSSSSSPLSALWDAS 1175 (1516)
T ss_pred EEeeeccceEEEEEccCccccccccccc--------------------cccccccccCCcceeeeeccccCchHHHhccc
Confidence 4678889999999999999888888888 66777777778877666554433 4578875
Q ss_pred C-CceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 79 G-SRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 79 ~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
. +...++|.. ..++.|+-.-..-+.|+......+||+++..
T Consensus 1176 s~~~~~Hsf~e----d~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~ 1217 (1516)
T KOG1832|consen 1176 STGGPRHSFDE----DKAVKFSNSLQFRALGTEADDALLYDVQTCS 1217 (1516)
T ss_pred cccCccccccc----cceeehhhhHHHHHhcccccceEEEecccCc
Confidence 4 445555542 3567887665666777777789999998864
No 337
>KOG2395|consensus
Probab=96.89 E-value=0.026 Score=38.82 Aligned_cols=67 Identities=19% Similarity=0.289 Sum_probs=48.2
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEe
Q psy14458 50 PVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTD 118 (125)
Q Consensus 50 ~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~ 118 (125)
...|.+--.+ -+++.|+.+|-|++||--....-..+.+...+|.++..+.+|++|++.+..- +.+-+
T Consensus 432 nFsc~aTT~s-G~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~ty-LlLi~ 498 (644)
T KOG2395|consen 432 NFSCFATTES-GYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATCKTY-LLLID 498 (644)
T ss_pred ccceeeecCC-ceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEecccE-EEEEE
Confidence 3445554433 4789999999999999633333445677888999999999999998877644 33433
No 338
>KOG2079|consensus
Probab=96.87 E-value=0.0029 Score=46.41 Aligned_cols=64 Identities=23% Similarity=0.332 Sum_probs=50.3
Q ss_pred CCCEEEEEeCCCcEEEEEcCCC-ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGS-RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
.+..++.|+..|.+-..|.+.. .++..-..-..+|.+++|+.+|..++.|-.+|.|.+||++.+
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~ 162 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRA 162 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCC
Confidence 4556888999999998887663 222222234578999999999999999999999999999874
No 339
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=96.78 E-value=0.034 Score=37.40 Aligned_cols=76 Identities=18% Similarity=0.260 Sum_probs=53.4
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCc-eeEEEEc-cC----------------CCeE-EEee
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTAD-VRSIRFS-PS----------------AYYL-LTGG 109 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-v~~~~~~-~~----------------~~~~-~~~~ 109 (125)
-.+.+++.+|.+.+.+..+.-|.|.++|+.++..++-+++..+. +.=+... +. ..+| +-+.
T Consensus 308 R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIyap 387 (415)
T PF14655_consen 308 REGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIYAP 387 (415)
T ss_pred ceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEEEec
Confidence 45789999999999999988899999999988777777754432 1101100 00 1223 3356
Q ss_pred cCCeEEEEeCCCCCC
Q psy14458 110 YDNKLVLTDLQGTMR 124 (125)
Q Consensus 110 ~d~~i~~~~~~~~~~ 124 (125)
..|.|.+|.++.+.+
T Consensus 388 rRg~lEvW~~~~g~R 402 (415)
T PF14655_consen 388 RRGILEVWSMRQGPR 402 (415)
T ss_pred cCCeEEEEecCCCCE
Confidence 789999999998764
No 340
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=96.78 E-value=0.032 Score=34.29 Aligned_cols=64 Identities=5% Similarity=0.124 Sum_probs=46.5
Q ss_pred ECCCCCEEEEEeCCCcEEEEEcCCCceeEEe------C--------CCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 56 VDPSGRLMVSGHEDSSCVLYDIRGSRPLQTF------K--------PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 56 ~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~------~--------~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
+...+++++.-+.+|.+++||+.+++.+..- - .....|..+.++.+|.-+++-+ +|..+.|+..
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~ 95 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPD 95 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEeccc
Confidence 4457888999999999999999987644322 1 1345678888888888777654 4667888754
No 341
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=96.77 E-value=0.067 Score=34.49 Aligned_cols=86 Identities=21% Similarity=0.298 Sum_probs=57.1
Q ss_pred cCCCeEEEEECC-CCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEe----------------
Q psy14458 5 HEDSSCVLYDIR-GSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGH---------------- 67 (125)
Q Consensus 5 ~~d~~i~v~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---------------- 67 (125)
...|.|-|||.. +.+.+..+..+. -.-..+.+.|+++.|+.+.
T Consensus 74 ~g~G~IgVyd~~~~~~ri~E~~s~G--------------------IGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl 133 (305)
T PF07433_consen 74 TGRGVIGVYDAARGYRRIGEFPSHG--------------------IGPHELLLMPDGETLVVANGGIETHPDSGRAKLNL 133 (305)
T ss_pred CCcEEEEEEECcCCcEEEeEecCCC--------------------cChhhEEEcCCCCEEEEEcCCCccCcccCceecCh
Confidence 345778888887 445566665444 3445566778886666654
Q ss_pred --CCCcEEEEEcCCCceeEEeC----CCCCceeEEEEccCCCeEEEeec
Q psy14458 68 --EDSSCVLYDIRGSRPLQTFK----PHTADVRSIRFSPSAYYLLTGGY 110 (125)
Q Consensus 68 --~~~~i~~~d~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~ 110 (125)
.+..+-..|..+++.+.... .|+..++++++.++|..++..-.
T Consensus 134 ~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~ 182 (305)
T PF07433_consen 134 DTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQY 182 (305)
T ss_pred hhcCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEec
Confidence 34455566677777666533 36778999999999877766543
No 342
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=96.70 E-value=0.013 Score=38.54 Aligned_cols=62 Identities=19% Similarity=0.257 Sum_probs=41.4
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeE-EeCCC----------------CCceeEEEEccCCCeEEEeecC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQ-TFKPH----------------TADVRSIRFSPSAYYLLTGGYD 111 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~-~~~~~----------------~~~v~~~~~~~~~~~~~~~~~d 111 (125)
..+....|+|+++.++... ++.|++.+..+++... +..+. -+.-..+.|+||+++|+....|
T Consensus 43 ~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d 121 (353)
T PF00930_consen 43 PKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFD 121 (353)
T ss_dssp TTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE
T ss_pred cccccceeecCCCeeEEEe-cCceEEEECCCCCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEEC
Confidence 5778899999999988885 6789999877664332 11110 1123568899999999887654
No 343
>KOG1008|consensus
Probab=96.61 E-value=0.00081 Score=46.64 Aligned_cols=71 Identities=21% Similarity=0.357 Sum_probs=49.9
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEcc-CCCeEEEeecCCeEEEEe-CCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSP-SAYYLLTGGYDNKLVLTD-LQG 121 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~i~~~~-~~~ 121 (125)
....++||-.+.+++.+|.....+.++|++...... ..-..+.|..+...| .+.++++-. |+.|.+|| .++
T Consensus 155 ~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~-~svnTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~rn 227 (783)
T KOG1008|consen 155 DGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSV-SSVNTKYVQGITVDPFSPNYFCSNS-DGDIAIWDTYRN 227 (783)
T ss_pred cCccccccccCcchhhcccccchhhhhhhhhhhhhh-hhhhhhhcccceecCCCCCceeccc-cCceeeccchhh
Confidence 445588888888888888888899999987432111 111234566677788 777777765 99999999 443
No 344
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=96.59 E-value=0.057 Score=37.18 Aligned_cols=56 Identities=9% Similarity=0.022 Sum_probs=37.1
Q ss_pred CCCcEEEEEcCCCceeEEeCCCC--------CceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 68 EDSSCVLYDIRGSRPLQTFKPHT--------ADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 68 ~~~~i~~~d~~~~~~~~~~~~~~--------~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.+|.+...|..+++.+....... .....-...-.+..++.++.|+.++.+|..++.
T Consensus 364 ~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~ald~~tG~ 427 (488)
T cd00216 364 GKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFRAFDATTGK 427 (488)
T ss_pred CceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEecCCeEEEECCCCeEEEEECCCCc
Confidence 46778888888888777665321 111111111255788888899999999998875
No 345
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=96.51 E-value=0.055 Score=36.64 Aligned_cols=71 Identities=23% Similarity=0.300 Sum_probs=43.6
Q ss_pred eEEEEECCCCCEEE-EEeCCCc--EEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeec-CCe--EEEEeCCCC
Q psy14458 51 VSALCVDPSGRLMV-SGHEDSS--CVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGY-DNK--LVLTDLQGT 122 (125)
Q Consensus 51 i~~~~~~~~~~~~~-~~~~~~~--i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-d~~--i~~~~~~~~ 122 (125)
-..-.|+|+++.++ +...+|. |++.|+..++... +....+.-..=.|+|||+.++-.+. .|. |.+.++.+.
T Consensus 240 ~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~-Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~ 316 (425)
T COG0823 240 NGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPR-LTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGS 316 (425)
T ss_pred cCCccCCCCCCEEEEEECCCCCccEEEEcCCCCccee-cccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCC
Confidence 34557999997664 4556665 6777777666333 4323333335679999998877664 444 555555544
No 346
>KOG0882|consensus
Probab=96.47 E-value=0.097 Score=35.47 Aligned_cols=58 Identities=17% Similarity=0.114 Sum_probs=45.9
Q ss_pred EEEeCCCcEEEEEcCCC--ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 64 VSGHEDSSCVLYDIRGS--RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 64 ~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
++.-.++.+.++|-... +....-..|..+|.++.++|-+..+++.-..|.|.-|....
T Consensus 116 Vs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~ 175 (558)
T KOG0882|consen 116 VSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEG 175 (558)
T ss_pred eecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCC
Confidence 34456788999997653 33444457999999999999999999999999999998763
No 347
>KOG3621|consensus
Probab=96.47 E-value=0.017 Score=40.64 Aligned_cols=77 Identities=17% Similarity=0.225 Sum_probs=57.3
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEE-eCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQT-FKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTMRP 125 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~ 125 (125)
..+.--+++..+++++.|+.-|.+++|+-..++.... ..+..+.......+++..+++.|+..|.|.++.++.+..|
T Consensus 34 ~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~ 111 (726)
T KOG3621|consen 34 ARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPR 111 (726)
T ss_pred ceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCC
Confidence 3445556677899999999999999999776654332 2223344455678888889999999999999998876543
No 348
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=96.42 E-value=0.07 Score=36.35 Aligned_cols=55 Identities=15% Similarity=0.218 Sum_probs=37.0
Q ss_pred CCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEe
Q psy14458 60 GRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTD 118 (125)
Q Consensus 60 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~ 118 (125)
|.+|+..+.+ .|.+||+.+++.+..+... +|..+.|++++++++..+.+. +.+++
T Consensus 117 G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~~-i~il~ 171 (443)
T PF04053_consen 117 GNLLGVKSSD-FICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTKDS-IYILK 171 (443)
T ss_dssp SSSEEEEETT-EEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S-S-EEEEE
T ss_pred CcEEEEECCC-CEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeCCe-EEEEE
Confidence 7766666544 8999999999999988733 388999999999999987664 55554
No 349
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=96.37 E-value=0.027 Score=25.18 Aligned_cols=30 Identities=17% Similarity=0.236 Sum_probs=24.9
Q ss_pred CeEEEEECCCC---CEEEEEeCCCcEEEEEcCC
Q psy14458 50 PVSALCVDPSG---RLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 50 ~i~~~~~~~~~---~~~~~~~~~~~i~~~d~~~ 79 (125)
.+.++.|+|.. .+|+.+-..+.+.++|+++
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 57889999754 5888888889999999985
No 350
>KOG1920|consensus
Probab=96.36 E-value=0.062 Score=40.35 Aligned_cols=71 Identities=17% Similarity=0.224 Sum_probs=49.1
Q ss_pred CeEEEEECCCCCEEEEEe---CCCcEEEEEcCCCce----eEEeCCCCCceeEEEEccCCCeEEE---eecCCeEEEEeC
Q psy14458 50 PVSALCVDPSGRLMVSGH---EDSSCVLYDIRGSRP----LQTFKPHTADVRSIRFSPSAYYLLT---GGYDNKLVLTDL 119 (125)
Q Consensus 50 ~i~~~~~~~~~~~~~~~~---~~~~i~~~d~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~---~~~d~~i~~~~~ 119 (125)
.-.+++|-|.|..+++-- .++.|.++.- +|.. ...+.....+|..++|+.++.+++. ......|.+|-.
T Consensus 243 l~~~LsWkPsgs~iA~iq~~~sd~~IvffEr-NGL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~ 321 (1265)
T KOG1920|consen 243 LQHSLSWKPSGSLIAAIQCKTSDSDIVFFER-NGLRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTT 321 (1265)
T ss_pred cccceeecCCCCeEeeeeecCCCCcEEEEec-CCccccccccCCcccccchheeeecCCCCceeeeecccccceEEEEEe
Confidence 446889999998887743 4556888873 3322 2223334445899999999999988 445555999977
Q ss_pred CC
Q psy14458 120 QG 121 (125)
Q Consensus 120 ~~ 121 (125)
.+
T Consensus 322 ~N 323 (1265)
T KOG1920|consen 322 GN 323 (1265)
T ss_pred cC
Confidence 65
No 351
>KOG1900|consensus
Probab=96.30 E-value=0.17 Score=38.54 Aligned_cols=116 Identities=15% Similarity=0.241 Sum_probs=73.3
Q ss_pred cCCCeEEEEECCCCcceeeecCCCCCeEEEEecC-------------------------------c----cc----cccc
Q psy14458 5 HEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDH-------------------------------Y----TT----EAGT 45 (125)
Q Consensus 5 ~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~-------------------------------~----~~----~~~~ 45 (125)
.-|+.+.+|+..++.....+.+-...|..+..-. . .. ....
T Consensus 96 TiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~i~ 175 (1311)
T KOG1900|consen 96 TIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFKIS 175 (1311)
T ss_pred EeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcccccccceeee
Confidence 4588999999998766666655444444443210 0 00 0011
Q ss_pred CCCCCeEEEEECCCCCEEEEEeCCCcEEEE--EcCCC---c-----------------eeEEeC-CCCCceeEEEEccCC
Q psy14458 46 RQGSPVSALCVDPSGRLMVSGHEDSSCVLY--DIRGS---R-----------------PLQTFK-PHTADVRSIRFSPSA 102 (125)
Q Consensus 46 ~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~--d~~~~---~-----------------~~~~~~-~~~~~v~~~~~~~~~ 102 (125)
..+..+.|+....+|+.+++| .||.|+-. ....+ + .+..+. .+..+|..+...-..
T Consensus 176 ~dg~~V~~I~~t~nGRIF~~G-~dg~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~SR 254 (1311)
T KOG1900|consen 176 VDGVSVNCITYTENGRIFFAG-RDGNLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDNSR 254 (1311)
T ss_pred cCCceEEEEEeccCCcEEEee-cCCCEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEecccc
Confidence 345678888877777766666 56654422 21111 0 122222 456789999998888
Q ss_pred CeEEEeecCCeEEEEeCCC
Q psy14458 103 YYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 103 ~~~~~~~~d~~i~~~~~~~ 121 (125)
.++.+-+..+++.+||+..
T Consensus 255 ~IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 255 NILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred ceeeeeccCceEEEEEccC
Confidence 8999999999999999976
No 352
>KOG2114|consensus
Probab=96.24 E-value=0.061 Score=39.02 Aligned_cols=67 Identities=15% Similarity=0.123 Sum_probs=42.9
Q ss_pred eEEEEECCCCCEEEEEeCCC-----cEEEEEcCCC------ceeE--EeCCC-----CCceeEEEEccCCCeEEEeecCC
Q psy14458 51 VSALCVDPSGRLMVSGHEDS-----SCVLYDIRGS------RPLQ--TFKPH-----TADVRSIRFSPSAYYLLTGGYDN 112 (125)
Q Consensus 51 i~~~~~~~~~~~~~~~~~~~-----~i~~~d~~~~------~~~~--~~~~~-----~~~v~~~~~~~~~~~~~~~~~d~ 112 (125)
+..+......+++++-.+|+ .+++|++..- +++. .+..+ ..++.+++.+.+-+.+++|-.+|
T Consensus 68 v~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG 147 (933)
T KOG2114|consen 68 VQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNG 147 (933)
T ss_pred hhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCc
Confidence 33333333446777766554 4899998642 2231 11122 34577888988989999999999
Q ss_pred eEEEE
Q psy14458 113 KLVLT 117 (125)
Q Consensus 113 ~i~~~ 117 (125)
.|..+
T Consensus 148 ~V~~~ 152 (933)
T KOG2114|consen 148 LVICY 152 (933)
T ss_pred EEEEE
Confidence 98877
No 353
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=96.19 E-value=0.16 Score=32.92 Aligned_cols=69 Identities=16% Similarity=0.168 Sum_probs=46.1
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEEcCC-CceeEEeC--CCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 50 PVSALCVDPSGRLMVSGHEDSSCVLYDIRG-SRPLQTFK--PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 50 ~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~-~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
.+.++.. .+++++.|+....+.++.... ...+..+. .....+.++.+-++++.++.+..+|.+.++...
T Consensus 131 ~i~sl~~--~~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~ 202 (321)
T PF03178_consen 131 YITSLSV--FKNYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN 202 (321)
T ss_dssp SEEEEEE--ETTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred EEEEEec--cccEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence 3444444 467999999999988875543 22232222 345568888888766789999999999998765
No 354
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=96.09 E-value=0.21 Score=34.53 Aligned_cols=63 Identities=16% Similarity=0.159 Sum_probs=39.7
Q ss_pred CEEEEEeCCCcEEEEEcCCCceeEEeCCCCCc--eeEEEEcc--CCCeEEEee---------cCCeEEEEeCCCCC
Q psy14458 61 RLMVSGHEDSSCVLYDIRGSRPLQTFKPHTAD--VRSIRFSP--SAYYLLTGG---------YDNKLVLTDLQGTM 123 (125)
Q Consensus 61 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--v~~~~~~~--~~~~~~~~~---------~d~~i~~~~~~~~~ 123 (125)
..++.++.++.|+.+|..+++.+..+...... -..+.-+| .+..++.++ .++.+..+|..++.
T Consensus 111 ~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~ 186 (488)
T cd00216 111 RKVFFGTFDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGK 186 (488)
T ss_pred CeEEEecCCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCc
Confidence 67778889999999999999988877643221 00111122 223444443 35778888887664
No 355
>KOG1008|consensus
Probab=96.09 E-value=0.002 Score=44.82 Aligned_cols=72 Identities=22% Similarity=0.310 Sum_probs=45.8
Q ss_pred CCeEEEEECC-CCCEEEEEeCCCcEEEEE-cCCCc-eeEEeCCCCC----ceeEEEEccCC-CeEEEee-cCCeEEEEeC
Q psy14458 49 SPVSALCVDP-SGRLMVSGHEDSSCVLYD-IRGSR-PLQTFKPHTA----DVRSIRFSPSA-YYLLTGG-YDNKLVLTDL 119 (125)
Q Consensus 49 ~~i~~~~~~~-~~~~~~~~~~~~~i~~~d-~~~~~-~~~~~~~~~~----~v~~~~~~~~~-~~~~~~~-~d~~i~~~~~ 119 (125)
+.+..+.++| ..+++++-. ||.|-+|| .++-+ ++..+...++ .+..++|.|.. ..+++.. ..++|+.+++
T Consensus 196 k~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi 274 (783)
T KOG1008|consen 196 KYVQGITVDPFSPNYFCSNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDI 274 (783)
T ss_pred hhcccceecCCCCCceeccc-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEecc
Confidence 4566777888 556666654 99999999 44432 2322222222 48899999943 2444444 5678999987
Q ss_pred CC
Q psy14458 120 QG 121 (125)
Q Consensus 120 ~~ 121 (125)
+.
T Consensus 275 ~~ 276 (783)
T KOG1008|consen 275 CV 276 (783)
T ss_pred cc
Confidence 63
No 356
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.03 E-value=0.12 Score=33.16 Aligned_cols=56 Identities=18% Similarity=0.329 Sum_probs=44.3
Q ss_pred EECCCCCEEEEEeC-----CCcEEEEEcCCC-ceeEEeCCCCCceeEEEEccCCCeEEEeec
Q psy14458 55 CVDPSGRLMVSGHE-----DSSCVLYDIRGS-RPLQTFKPHTADVRSIRFSPSAYYLLTGGY 110 (125)
Q Consensus 55 ~~~~~~~~~~~~~~-----~~~i~~~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 110 (125)
.|||+|.+|...-+ -|.|-+||.+.+ +.+.++..|.-.-+.+.+.+||+.++.+..
T Consensus 120 vfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanG 181 (366)
T COG3490 120 VFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVANG 181 (366)
T ss_pred ccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeCC
Confidence 58999998876543 377999999864 567778888777788999999999987654
No 357
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=96.00 E-value=0.18 Score=31.24 Aligned_cols=73 Identities=10% Similarity=0.171 Sum_probs=52.2
Q ss_pred CCeEEEEECCCCCEEE-EEeCCCcEEEEEcCCCc-------eeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 49 SPVSALCVDPSGRLMV-SGHEDSSCVLYDIRGSR-------PLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~-~~~~~~~i~~~d~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
...+.++|+|+++.++ +-+..+.|..+++.... .+..+....+..-.+++.++|++.++....+.|.+++.+
T Consensus 134 ~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~ 213 (246)
T PF08450_consen 134 GFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD 213 (246)
T ss_dssp SSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT
T ss_pred ccccceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC
Confidence 4568999999998665 56677889999986321 122233222346679999999999988889999999887
Q ss_pred C
Q psy14458 121 G 121 (125)
Q Consensus 121 ~ 121 (125)
.
T Consensus 214 G 214 (246)
T PF08450_consen 214 G 214 (246)
T ss_dssp S
T ss_pred c
Confidence 4
No 358
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=95.89 E-value=0.45 Score=34.87 Aligned_cols=117 Identities=13% Similarity=0.154 Sum_probs=64.7
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCC--------eEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEE
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTAD--------VRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCV 73 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~--------i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~ 73 (125)
..++.++.|.-.|..+++.+..+...... .+.+.+........ ....... -...+..++.++.|+.+.
T Consensus 198 Yv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~--~~~~~~~--p~~~~~rV~~~T~Dg~Li 273 (764)
T TIGR03074 198 YLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAA--GPAAPAA--PADCARRIILPTSDARLI 273 (764)
T ss_pred EEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccc--ccccccc--ccccCCEEEEecCCCeEE
Confidence 45677888999999999988887643211 01111100000000 0000000 001345788888999999
Q ss_pred EEEcCCCceeEEeCCCCCcee-------------EEEEcc--CCCeEEEeec----------CCeEEEEeCCCCC
Q psy14458 74 LYDIRGSRPLQTFKPHTADVR-------------SIRFSP--SAYYLLTGGY----------DNKLVLTDLQGTM 123 (125)
Q Consensus 74 ~~d~~~~~~~~~~~~~~~~v~-------------~~~~~~--~~~~~~~~~~----------d~~i~~~~~~~~~ 123 (125)
-.|..+++.+..|.. ++.|. .+.-.| -+..++.|+. +|.|+-+|.+++.
T Consensus 274 ALDA~TGk~~W~fg~-~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGk 347 (764)
T TIGR03074 274 ALDADTGKLCEDFGN-NGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGA 347 (764)
T ss_pred EEECCCCCEEEEecC-CCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCc
Confidence 999999998877642 22110 112223 2334444532 5889999998875
No 359
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=95.73 E-value=0.037 Score=40.17 Aligned_cols=55 Identities=18% Similarity=0.320 Sum_probs=38.6
Q ss_pred CeeecCCCeEEEEECCCCcceee-ecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEc
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQT-FKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDI 77 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~ 77 (125)
||.|+.+|.||+||- .++...+ +.+-. .+|..|+.+.+|++++..+. ..|-+++.
T Consensus 591 iavgs~~G~IRLyd~-~g~~AKT~lp~lG--------------------~pI~~iDvt~DGkwilaTc~-tyLlLi~t 646 (794)
T PF08553_consen 591 IAVGSNKGDIRLYDR-LGKRAKTALPGLG--------------------DPIIGIDVTADGKWILATCK-TYLLLIDT 646 (794)
T ss_pred EEEEeCCCcEEeecc-cchhhhhcCCCCC--------------------CCeeEEEecCCCcEEEEeec-ceEEEEEE
Confidence 588999999999994 4433222 33333 78899999999998877764 44555554
No 360
>KOG1920|consensus
Probab=95.71 E-value=0.19 Score=37.97 Aligned_cols=69 Identities=9% Similarity=-0.010 Sum_probs=55.9
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEe
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTD 118 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~ 118 (125)
..|.++.|..+.+.++.+...|.|.+.|..+..... ...-.+.|.+++|+||++.++..+.++++.+-.
T Consensus 69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~ei-vg~vd~GI~aaswS~Dee~l~liT~~~tll~mT 137 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICVITALGDIILVDPETLELEI-VGNVDNGISAASWSPDEELLALITGRQTLLFMT 137 (1265)
T ss_pred cceEEEEEecccceEEEEecCCcEEEEcccccceee-eeeccCceEEEeecCCCcEEEEEeCCcEEEEEe
Confidence 478899999999999999999999999877654322 223457899999999999999999988887653
No 361
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=95.63 E-value=0.13 Score=32.38 Aligned_cols=62 Identities=21% Similarity=0.335 Sum_probs=42.6
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 58 PSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 58 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
..++.++.|+++| +++++........... +...|..+...|+-+.++.-+ |+.++++++...
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~-~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l 66 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRIL-KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSL 66 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCccceeEe-ecceEEEEEEecccCEEEEEc-CCccEEEEchhh
Confidence 4578899998888 8999983322222222 233388999988776666664 499999998654
No 362
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=95.62 E-value=0.39 Score=32.12 Aligned_cols=72 Identities=17% Similarity=0.291 Sum_probs=54.3
Q ss_pred CeEEEEECCCCCEEEEEeC---CCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEe-ecCCeEEEEeCCCC
Q psy14458 50 PVSALCVDPSGRLMVSGHE---DSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTG-GYDNKLVLTDLQGT 122 (125)
Q Consensus 50 ~i~~~~~~~~~~~~~~~~~---~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~d~~i~~~~~~~~ 122 (125)
....++++++++.+..+.. ++.+.+.|..+.+.......-..+ ..+.++|+|..+... ..++.+.+.|.++.
T Consensus 117 ~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~ 192 (381)
T COG3391 117 GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGN 192 (381)
T ss_pred CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCc
Confidence 4567899999977766655 688999999888887775433334 789999999855554 47899999987653
No 363
>KOG4499|consensus
Probab=95.44 E-value=0.35 Score=30.34 Aligned_cols=49 Identities=20% Similarity=0.269 Sum_probs=42.0
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEcc
Q psy14458 52 SALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSP 100 (125)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~ 100 (125)
-.++..-+|++.++.-+.++|.-.|..+++.+.+++.-...+++.+|--
T Consensus 215 DGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qitsccFgG 263 (310)
T KOG4499|consen 215 DGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITSCCFGG 263 (310)
T ss_pred CcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEEEEecC
Confidence 3556677889999999999999999999999999987788899999954
No 364
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=95.40 E-value=0.19 Score=34.31 Aligned_cols=49 Identities=16% Similarity=0.217 Sum_probs=30.3
Q ss_pred CCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEc
Q psy14458 6 EDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDI 77 (125)
Q Consensus 6 ~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~ 77 (125)
.++.|.+||..+++.+..+.. ..|..+.|++++++++..+.+ .+.+++.
T Consensus 124 ~~~~i~~yDw~~~~~i~~i~v----------------------~~vk~V~Ws~~g~~val~t~~-~i~il~~ 172 (443)
T PF04053_consen 124 SSDFICFYDWETGKLIRRIDV----------------------SAVKYVIWSDDGELVALVTKD-SIYILKY 172 (443)
T ss_dssp ETTEEEEE-TTT--EEEEESS-----------------------E-EEEEE-TTSSEEEEE-S--SEEEEEE
T ss_pred CCCCEEEEEhhHcceeeEEec----------------------CCCcEEEEECCCCEEEEEeCC-eEEEEEe
Confidence 344688888888777777662 247889999999999888755 5666664
No 365
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=95.38 E-value=0.42 Score=32.55 Aligned_cols=84 Identities=19% Similarity=0.252 Sum_probs=51.6
Q ss_pred cccccccCCCCCeEEEEECCCCCEEEEE---eCC-CcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEee-cCCe
Q psy14458 39 YTTEAGTRQGSPVSALCVDPSGRLMVSG---HED-SSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGG-YDNK 113 (125)
Q Consensus 39 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~-~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~d~~ 113 (125)
............+..-+|+|++..++-. ... ..+.++++.+++...... ..+.-..-+|+|||+.++-.. .|+.
T Consensus 183 ~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~-~~g~~~~P~fspDG~~l~f~~~rdg~ 261 (425)
T COG0823 183 YNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN-FNGNNGAPAFSPDGSKLAFSSSRDGS 261 (425)
T ss_pred cceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec-cCCccCCccCCCCCCEEEEEECCCCC
Confidence 3333444445667777888887654332 222 458999998876544443 223334578999998776544 5655
Q ss_pred --EEEEeCCCCC
Q psy14458 114 --LVLTDLQGTM 123 (125)
Q Consensus 114 --i~~~~~~~~~ 123 (125)
|++.|+.++.
T Consensus 262 ~~iy~~dl~~~~ 273 (425)
T COG0823 262 PDIYLMDLDGKN 273 (425)
T ss_pred ccEEEEcCCCCc
Confidence 6666776654
No 366
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=95.36 E-value=0.24 Score=28.05 Aligned_cols=106 Identities=13% Similarity=0.186 Sum_probs=61.9
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECC-----CCCEEEEEeCCCcEEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDP-----SGRLMVSGHEDSSCVLY 75 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~~~~i~~~ 75 (125)
|+.+..-++|.|++.........- ...+++.+.++ ..|++++--+ +...|+.|+ ...+..|
T Consensus 13 L~~aT~~gKV~IH~ph~~~~~~~~--~~~~i~~LNin-----------~~italaaG~l~~~~~~D~LliGt-~t~llaY 78 (136)
T PF14781_consen 13 LACATTGGKVFIHNPHERGQRTGR--QDSDISFLNIN-----------QEITALAAGRLKPDDGRDCLLIGT-QTSLLAY 78 (136)
T ss_pred EEEEecCCEEEEECCCcccccccc--ccCceeEEECC-----------CceEEEEEEecCCCCCcCEEEEec-cceEEEE
Confidence 345666788888887543322111 45566666666 6777776544 346677775 5678899
Q ss_pred EcCCCceeEEeCCCCCceeEEEEcc---CCCeEEEeecCCeEEEEeCCC
Q psy14458 76 DIRGSRPLQTFKPHTADVRSIRFSP---SAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 76 d~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~~~~~d~~i~~~~~~~ 121 (125)
|+.....++..+ -...|+++.+-. ...-++..+.+-.|.-+|.+.
T Consensus 79 DV~~N~d~Fyke-~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G 126 (136)
T PF14781_consen 79 DVENNSDLFYKE-VPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEG 126 (136)
T ss_pred EcccCchhhhhh-CccceeEEEEEecCCCCCcEEEECceEEEEEeCCCC
Confidence 998877666444 345677765522 223344444445555555443
No 367
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=95.20 E-value=0.43 Score=32.07 Aligned_cols=72 Identities=13% Similarity=0.260 Sum_probs=45.5
Q ss_pred CeEEEEECCCCCEEEEE-eCCC----cEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCC-----------e
Q psy14458 50 PVSALCVDPSGRLMVSG-HEDS----SCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDN-----------K 113 (125)
Q Consensus 50 ~i~~~~~~~~~~~~~~~-~~~~----~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~-----------~ 113 (125)
.+....++|++++++.+ +..| .++++|+.+++.+...- ....-..+.|.++++.++-...+. .
T Consensus 125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i-~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~ 203 (414)
T PF02897_consen 125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGI-ENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQ 203 (414)
T ss_dssp EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEE-EEEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEE
T ss_pred EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcc-cccccceEEEeCCCCEEEEEEeCcccccccCCCCcE
Confidence 44578899999987654 3333 49999999997654321 111122399999987765554322 3
Q ss_pred EEEEeCCCC
Q psy14458 114 LVLTDLQGT 122 (125)
Q Consensus 114 i~~~~~~~~ 122 (125)
++.|.+.+.
T Consensus 204 v~~~~~gt~ 212 (414)
T PF02897_consen 204 VYRHKLGTP 212 (414)
T ss_dssp EEEEETTS-
T ss_pred EEEEECCCC
Confidence 677776654
No 368
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=95.19 E-value=0.1 Score=34.31 Aligned_cols=64 Identities=23% Similarity=0.442 Sum_probs=42.9
Q ss_pred CCCCCEEEEEe---------CCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 57 DPSGRLMVSGH---------EDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 57 ~~~~~~~~~~~---------~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
||++++++... ..+.+.++|+.+++... +......+....|+|+|+.++-.. ++.|.+.++.++
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~-l~~~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~ 73 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITP-LTPPPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATG 73 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEE-SS-EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTS
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEE-CcCCccccccceeecCCCeeEEEe-cCceEEEECCCC
Confidence 46666665532 34668899998865443 322256788899999999988875 567888887554
No 369
>KOG2395|consensus
Probab=95.19 E-value=0.6 Score=32.63 Aligned_cols=55 Identities=20% Similarity=0.300 Sum_probs=35.6
Q ss_pred EEEeCCCcEEEEEcCCCce--eEEeCCC----CCceeEEEEccCCCeEEEeecCCeEEEEeC
Q psy14458 64 VSGHEDSSCVLYDIRGSRP--LQTFKPH----TADVRSIRFSPSAYYLLTGGYDNKLVLTDL 119 (125)
Q Consensus 64 ~~~~~~~~i~~~d~~~~~~--~~~~~~~----~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~ 119 (125)
+.|-.++.|.-||.+-... +..-..| +....|++-..+| +|+.||.+|.|++||.
T Consensus 398 lvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdr 458 (644)
T KOG2395|consen 398 LVGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFSCFATTESG-YIVVGSLKGDIRLYDR 458 (644)
T ss_pred EEeecCCceEEecccccCcceeeeeeccccccccccceeeecCCc-eEEEeecCCcEEeehh
Confidence 4455677888899875322 2211212 2334566655555 8999999999999986
No 370
>KOG4460|consensus
Probab=95.04 E-value=0.78 Score=32.18 Aligned_cols=75 Identities=13% Similarity=0.119 Sum_probs=50.5
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcC---------CCceeEEeC----------C-CCCceeEEEEccC---CCeE
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIR---------GSRPLQTFK----------P-HTADVRSIRFSPS---AYYL 105 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~---------~~~~~~~~~----------~-~~~~v~~~~~~~~---~~~~ 105 (125)
..|..+..++.|..++..+.+|.+-.+-.+ .++.....+ . ..=.+...+|+|+ ..++
T Consensus 104 feV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL 183 (741)
T KOG4460|consen 104 FEVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHL 183 (741)
T ss_pred EEEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceE
Confidence 467888999999998888888875443311 232211111 0 1113567899996 4789
Q ss_pred EEeecCCeEEEEeCCCCC
Q psy14458 106 LTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 106 ~~~~~d~~i~~~~~~~~~ 123 (125)
..-+.|.+|++||+....
T Consensus 184 ~iL~sdnviRiy~lS~~t 201 (741)
T KOG4460|consen 184 VLLTSDNVIRIYSLSEPT 201 (741)
T ss_pred EEEecCcEEEEEecCCcc
Confidence 999999999999987653
No 371
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=94.82 E-value=0.32 Score=34.04 Aligned_cols=66 Identities=17% Similarity=0.163 Sum_probs=38.5
Q ss_pred CCCCEEEEEeCCCcEEEEEcCC----CceeEE--eCC--------------------CCCceeEEEEcc----CCCeEEE
Q psy14458 58 PSGRLMVSGHEDSSCVLYDIRG----SRPLQT--FKP--------------------HTADVRSIRFSP----SAYYLLT 107 (125)
Q Consensus 58 ~~~~~~~~~~~~~~i~~~d~~~----~~~~~~--~~~--------------------~~~~v~~~~~~~----~~~~~~~ 107 (125)
++...++.+..||.+....... +..... +.. ....+..+..++ +..++++
T Consensus 156 ~~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t 235 (547)
T PF11715_consen 156 DSEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFT 235 (547)
T ss_dssp -SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEE
T ss_pred cCCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEE
Confidence 3556677777888877766553 111111 110 112344556665 6789999
Q ss_pred eecCCeEEEEeCCCCC
Q psy14458 108 GGYDNKLVLTDLQGTM 123 (125)
Q Consensus 108 ~~~d~~i~~~~~~~~~ 123 (125)
.+.|+++++||+.++.
T Consensus 236 l~~D~~LRiW~l~t~~ 251 (547)
T PF11715_consen 236 LSRDHTLRIWSLETGQ 251 (547)
T ss_dssp EETTSEEEEEETTTTC
T ss_pred EeCCCeEEEEECCCCe
Confidence 9999999999998874
No 372
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=94.79 E-value=0.56 Score=30.45 Aligned_cols=93 Identities=23% Similarity=0.264 Sum_probs=52.8
Q ss_pred CeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEE---EECCC----CCEEEEEeC---------C-C
Q psy14458 8 SSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSAL---CVDPS----GRLMVSGHE---------D-S 70 (125)
Q Consensus 8 ~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~---~~~~~----~~~~~~~~~---------~-~ 70 (125)
..|++.|..+.+.+..+.-... ..+.++ .+..+ .++++.|+. . |
T Consensus 2 s~i~l~d~~~~~~~~~~~l~~~-------------------E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~G 62 (321)
T PF03178_consen 2 SSIRLVDPTTFEVLDSFELEPN-------------------EHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSG 62 (321)
T ss_dssp -EEEEEETTTSSEEEEEEEETT-------------------EEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-E
T ss_pred cEEEEEeCCCCeEEEEEECCCC-------------------ceEEEEEEEEEcCccccccCEEEEEecccccccccccCc
Confidence 3588888887776655442221 223333 33322 456666652 2 8
Q ss_pred cEEEEEcCCC----ceeEEe--CCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 71 SCVLYDIRGS----RPLQTF--KPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 71 ~i~~~d~~~~----~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
.|.++++... ..+..+ ...+++|.+++-- ++. ++.+ .++.+.+|++...
T Consensus 63 ri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~-~~~-lv~~-~g~~l~v~~l~~~ 117 (321)
T PF03178_consen 63 RILVFEISESPENNFKLKLIHSTEVKGPVTAICSF-NGR-LVVA-VGNKLYVYDLDNS 117 (321)
T ss_dssp EEEEEEECSS-----EEEEEEEEEESS-EEEEEEE-TTE-EEEE-ETTEEEEEEEETT
T ss_pred EEEEEEEEcccccceEEEEEEEEeecCcceEhhhh-CCE-EEEe-ecCEEEEEEccCc
Confidence 8999999883 122211 2357889888755 554 3333 3478999988654
No 373
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=94.77 E-value=0.21 Score=32.79 Aligned_cols=40 Identities=15% Similarity=0.350 Sum_probs=27.7
Q ss_pred CCeEEEEECCCC-CEEEEEe-CCCcEEEEEcCCCceeEEeCC
Q psy14458 49 SPVSALCVDPSG-RLMVSGH-EDSSCVLYDIRGSRPLQTFKP 88 (125)
Q Consensus 49 ~~i~~~~~~~~~-~~~~~~~-~~~~i~~~d~~~~~~~~~~~~ 88 (125)
.++.+|.++.+. .+|+..+ .++.+.+||..+++.+..+..
T Consensus 289 ~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~ 330 (342)
T PF06433_consen 289 HPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQ 330 (342)
T ss_dssp EEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE--
T ss_pred CccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhc
Confidence 356788888876 4665554 578999999999999888873
No 374
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=94.64 E-value=0.88 Score=30.86 Aligned_cols=50 Identities=16% Similarity=0.217 Sum_probs=37.3
Q ss_pred cEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 71 SCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 71 ~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
.|++|+.. |+.+..+....+.+.++.|+.+ ..|+....||.++++|+.+.
T Consensus 62 ~I~iys~s-G~ll~~i~w~~~~iv~~~wt~~-e~LvvV~~dG~v~vy~~~G~ 111 (410)
T PF04841_consen 62 SIQIYSSS-GKLLSSIPWDSGRIVGMGWTDD-EELVVVQSDGTVRVYDLFGE 111 (410)
T ss_pred EEEEECCC-CCEeEEEEECCCCEEEEEECCC-CeEEEEEcCCEEEEEeCCCc
Confidence 48888754 6666666544478999999875 56667779999999998643
No 375
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=94.55 E-value=0.68 Score=29.18 Aligned_cols=98 Identities=20% Similarity=0.283 Sum_probs=56.2
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
|+.|.++| +.++++........+. +. ..|..+...|+.+.++.-+ |+.++++++..-
T Consensus 10 L~vGt~~G-l~~~~~~~~~~~~~i~-~~--------------------~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l 66 (275)
T PF00780_consen 10 LLVGTEDG-LYVYDLSDPSKPTRIL-KL--------------------SSITQLSVLPELNLLLVLS-DGQLYVYDLDSL 66 (275)
T ss_pred EEEEECCC-EEEEEecCCccceeEe-ec--------------------ceEEEEEEecccCEEEEEc-CCccEEEEchhh
Confidence 46677888 8888872222222221 11 3478888888877776664 499999998763
Q ss_pred ceeEE--------------eCCCCCceeEEE--EccCCCeEEEeecCCeEEEEeCCC
Q psy14458 81 RPLQT--------------FKPHTADVRSIR--FSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 81 ~~~~~--------------~~~~~~~v~~~~--~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
..... .......+...+ -.+++...+.....+.|.+|....
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~ 123 (275)
T PF00780_consen 67 EPVSTSAPLAFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWND 123 (275)
T ss_pred ccccccccccccccccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEEC
Confidence 32221 011223454444 122444455555556888887765
No 376
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=94.51 E-value=1.2 Score=31.95 Aligned_cols=67 Identities=12% Similarity=0.214 Sum_probs=45.7
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeC-CCCCceeEEEEcc--CCCeEEEeecCCeEEEEeC
Q psy14458 53 ALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFK-PHTADVRSIRFSP--SAYYLLTGGYDNKLVLTDL 119 (125)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~v~~~~~~~--~~~~~~~~~~d~~i~~~~~ 119 (125)
-+.-+..++..+.-+....+.|||.+.+.....-. ...+.|..+.|.. +++.+++.+....|.++.-
T Consensus 34 li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q 103 (631)
T PF12234_consen 34 LISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQ 103 (631)
T ss_pred eEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEc
Confidence 33334444444444445569999998876443332 3467899998854 8999999999999888853
No 377
>KOG3617|consensus
Probab=94.47 E-value=0.19 Score=37.08 Aligned_cols=33 Identities=15% Similarity=0.281 Sum_probs=30.0
Q ss_pred CCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcC
Q psy14458 46 RQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIR 78 (125)
Q Consensus 46 ~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~ 78 (125)
.|+.+|..+.||++|..++++..-|.+.+|...
T Consensus 99 th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 99 THPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred CCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 456889999999999999999999999999875
No 378
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=94.16 E-value=1.2 Score=30.30 Aligned_cols=54 Identities=13% Similarity=0.266 Sum_probs=40.6
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCC-CCceeEEEEccCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPH-TADVRSIRFSPSA 102 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~v~~~~~~~~~ 102 (125)
.++..|++||++++++.-..+|.+.+.+..-.+....+... ......+.|.-+.
T Consensus 217 ~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~d 271 (410)
T PF04841_consen 217 GPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGND 271 (410)
T ss_pred CCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCC
Confidence 46899999999999999999999999887666666666533 3445567775543
No 379
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=94.16 E-value=0.26 Score=34.46 Aligned_cols=38 Identities=16% Similarity=0.284 Sum_probs=28.6
Q ss_pred CCeEEEEECC----CCCEEEEEeCCCcEEEEEcCCCceeEEe
Q psy14458 49 SPVSALCVDP----SGRLMVSGHEDSSCVLYDIRGSRPLQTF 86 (125)
Q Consensus 49 ~~i~~~~~~~----~~~~~~~~~~~~~i~~~d~~~~~~~~~~ 86 (125)
.....++++. +..++++.+.|+.+|+||+.+++++...
T Consensus 215 ~~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~~ 256 (547)
T PF11715_consen 215 SVAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLATI 256 (547)
T ss_dssp --EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEEE
T ss_pred CccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Confidence 4456666766 6789999999999999999999885554
No 380
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=94.11 E-value=1.4 Score=31.00 Aligned_cols=64 Identities=13% Similarity=0.035 Sum_probs=39.8
Q ss_pred CCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCc-eeEEEEcc---CCCeEEEee-----cCCeEEEEeCCCCC
Q psy14458 60 GRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTAD-VRSIRFSP---SAYYLLTGG-----YDNKLVLTDLQGTM 123 (125)
Q Consensus 60 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-v~~~~~~~---~~~~~~~~~-----~d~~i~~~~~~~~~ 123 (125)
+..++.++.++.+..+|..+++.+......... -..+.-+| ++..++..+ .++.|..+|.+++.
T Consensus 120 ~~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~ 192 (527)
T TIGR03075 120 DGKVFFGTLDARLVALDAKTGKVVWSKKNGDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGK 192 (527)
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeecccccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCc
Confidence 346777888999999999999988776521110 01111222 454444322 26889999988774
No 381
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=94.06 E-value=1.1 Score=29.57 Aligned_cols=73 Identities=15% Similarity=0.204 Sum_probs=51.1
Q ss_pred CCeEEEEECCCCCEEEEEeC---CCcEEEEEcCC--CceeEE--eCCCCCceeEEEEccCCCeEEEeec-CCeEEEEeCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHE---DSSCVLYDIRG--SRPLQT--FKPHTADVRSIRFSPSAYYLLTGGY-DNKLVLTDLQ 120 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~---~~~i~~~d~~~--~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~-d~~i~~~~~~ 120 (125)
...+-++++|+++.|.++.. +|.|-.|.+.. ++.... ......+-..+++++++++++++.. -+.|.++-++
T Consensus 40 ~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~ 119 (346)
T COG2706 40 GNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQ 119 (346)
T ss_pred CCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEEEcc
Confidence 56788999999988877754 46676666653 443221 2222334478999999999999885 6788888776
Q ss_pred C
Q psy14458 121 G 121 (125)
Q Consensus 121 ~ 121 (125)
.
T Consensus 120 ~ 120 (346)
T COG2706 120 A 120 (346)
T ss_pred c
Confidence 4
No 382
>KOG3630|consensus
Probab=94.05 E-value=0.22 Score=37.68 Aligned_cols=59 Identities=15% Similarity=0.220 Sum_probs=42.7
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeC---C-CCCceeEEEEccCCCeEEEe
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFK---P-HTADVRSIRFSPSAYYLLTG 108 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~---~-~~~~v~~~~~~~~~~~~~~~ 108 (125)
...++++|+|.|..++.|...|++.=|..... ....+. . ....|.+++|-....+++.-
T Consensus 199 ~~~Tav~WSprGKQl~iG~nnGt~vQy~P~le-ik~~ip~Pp~~e~yrvl~v~Wl~t~eflvvy 261 (1405)
T KOG3630|consen 199 NSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLE-IKSEIPEPPVEENYRVLSVTWLSTQEFLVVY 261 (1405)
T ss_pred cceeeEEeccccceeeEecCCCeEEEeecccc-eeecccCCCcCCCcceeEEEEecceeEEEEe
Confidence 56899999999999999999999877754332 111121 1 24678999998877777663
No 383
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=94.00 E-value=1.5 Score=30.88 Aligned_cols=31 Identities=23% Similarity=0.360 Sum_probs=26.0
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEeCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPH 89 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 89 (125)
.+.+++.++.+|.++.+|.++++.+..++..
T Consensus 471 ~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~g 501 (527)
T TIGR03075 471 AGDLVFYGTLEGYFKAFDAKTGEELWKFKTG 501 (527)
T ss_pred CCcEEEEECCCCeEEEEECCCCCEeEEEeCC
Confidence 4456777888999999999999999988743
No 384
>PRK13616 lipoprotein LpqB; Provisional
Probab=93.93 E-value=1.5 Score=31.33 Aligned_cols=63 Identities=6% Similarity=-0.049 Sum_probs=39.0
Q ss_pred CeEEEEECCCCCEEEEEeCC------------CcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEE
Q psy14458 50 PVSALCVDPSGRLMVSGHED------------SSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVL 116 (125)
Q Consensus 50 ~i~~~~~~~~~~~~~~~~~~------------~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~ 116 (125)
..+.-.|+|++..+.+.... +.+.+.++..++... ...+.|..+.|+|||..++... ++.+.+
T Consensus 398 ~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~V 472 (591)
T PRK13616 398 SLTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYL 472 (591)
T ss_pred CCCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEE
Confidence 46677899987766665432 223333333332222 2356799999999999887765 456666
No 385
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=93.79 E-value=1.4 Score=29.85 Aligned_cols=72 Identities=22% Similarity=0.369 Sum_probs=45.8
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEEcCCC-------------------------------------------ceeEEe
Q psy14458 50 PVSALCVDPSGRLMVSGHEDSSCVLYDIRGS-------------------------------------------RPLQTF 86 (125)
Q Consensus 50 ~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~-------------------------------------------~~~~~~ 86 (125)
.|+.+.+.++-..++.|...|.|-+|..... .+...+
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 4667777777666777777777766654211 011122
Q ss_pred CCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 87 KPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 87 ~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
....++|++++.+ |=-+++.|..+|.+.+.|+|+.
T Consensus 83 ~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGP 117 (395)
T PF08596_consen 83 DAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGP 117 (395)
T ss_dssp ---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTT
T ss_pred eccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCC
Confidence 2346789999886 6569999999999999999864
No 386
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=93.71 E-value=1.4 Score=30.94 Aligned_cols=60 Identities=18% Similarity=0.276 Sum_probs=44.9
Q ss_pred CCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 60 GRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 60 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
.-+++.++..|-|++||--.-..-..+.+....|..+..+.+|+++++.|.. .+.+-|++
T Consensus 573 sGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~-yllL~d~~ 632 (776)
T COG5167 573 SGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKN-YLLLTDVP 632 (776)
T ss_pred CceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecc-eEEEEecc
Confidence 4589999999999999954333333456677889999999999999887764 45555554
No 387
>KOG2444|consensus
Probab=93.58 E-value=0.2 Score=31.00 Aligned_cols=59 Identities=15% Similarity=0.175 Sum_probs=37.8
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEE--eCCCcEEEEEcCC
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSG--HEDSSCVLYDIRG 79 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~i~~~d~~~ 79 (125)
.+++.|+.|+.|++..++.+.....|.. ........+..+.++.++ +.+..++.|++..
T Consensus 118 c~~~~dg~ir~~n~~p~k~~g~~g~h~~-------------------~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 118 CVGAQDGRIRACNIKPNKVLGYVGQHNF-------------------ESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred EEeccCCceeeeccccCceeeeeccccC-------------------CCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence 4678888888888887777666554541 233344444455666666 6777777777643
No 388
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=93.51 E-value=1.6 Score=29.60 Aligned_cols=71 Identities=27% Similarity=0.346 Sum_probs=49.8
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeC--C------CCCceeEEEEcc-----CC---CeEEEeecC
Q psy14458 48 GSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFK--P------HTADVRSIRFSP-----SA---YYLLTGGYD 111 (125)
Q Consensus 48 ~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~--~------~~~~v~~~~~~~-----~~---~~~~~~~~d 111 (125)
..+|++++.| +=-+++.|.++|.+-|.|+|....++.-. . ....+.++.|.. |+ -.+++|...
T Consensus 86 ~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn~ 164 (395)
T PF08596_consen 86 QGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTNS 164 (395)
T ss_dssp S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEETT
T ss_pred CCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEeCC
Confidence 5889999997 45689999999999999998776555421 1 234577787764 33 467788888
Q ss_pred CeEEEEeC
Q psy14458 112 NKLVLTDL 119 (125)
Q Consensus 112 ~~i~~~~~ 119 (125)
|.+.+|.+
T Consensus 165 G~v~~fkI 172 (395)
T PF08596_consen 165 GNVLTFKI 172 (395)
T ss_dssp SEEEEEEE
T ss_pred CCEEEEEE
Confidence 99988865
No 389
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=93.44 E-value=0.53 Score=31.01 Aligned_cols=51 Identities=18% Similarity=0.180 Sum_probs=38.5
Q ss_pred EEEEEcCCCceeEEeCCCCCceeEEEEccCCC-eEEEe-ecCCeEEEEeCCCCC
Q psy14458 72 CVLYDIRGSRPLQTFKPHTADVRSIRFSPSAY-YLLTG-GYDNKLVLTDLQGTM 123 (125)
Q Consensus 72 i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~-~~d~~i~~~~~~~~~ 123 (125)
|.++|+.+++.+..+. -..++.++..+.+.+ +|+.. ..++.+.++|..++.
T Consensus 271 VWv~D~~t~krv~Ri~-l~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk 323 (342)
T PF06433_consen 271 VWVYDLKTHKRVARIP-LEHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGK 323 (342)
T ss_dssp EEEEETTTTEEEEEEE-EEEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--
T ss_pred EEEEECCCCeEEEEEe-CCCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCc
Confidence 7778888999888887 345678899998665 55554 468999999998874
No 390
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=93.24 E-value=0.91 Score=28.02 Aligned_cols=75 Identities=5% Similarity=0.052 Sum_probs=44.5
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCc
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSR 81 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 81 (125)
+.-..+|.+++||+.+++.+..-. .-.++..... .........|..+.+..+|.-+++-+ +|..+.|+..-+.
T Consensus 26 l~iT~~G~l~vWnl~~~k~~~~~~-Si~pll~~~~-----~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L~~ 98 (219)
T PF07569_consen 26 LAITSSGLLYVWNLKKGKAVLPPV-SIAPLLNSSP-----VSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDLGC 98 (219)
T ss_pred EEEeCCCeEEEEECCCCeeccCCc-cHHHHhcccc-----cccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEeccccce
Confidence 456789999999999876632210 1111111000 00003347788999998887776654 5778999876544
Q ss_pred ee
Q psy14458 82 PL 83 (125)
Q Consensus 82 ~~ 83 (125)
.+
T Consensus 99 W~ 100 (219)
T PF07569_consen 99 WI 100 (219)
T ss_pred eE
Confidence 33
No 391
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=93.13 E-value=1.5 Score=28.42 Aligned_cols=72 Identities=14% Similarity=0.174 Sum_probs=53.1
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCC-----ceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTA-----DVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
.-++++...++|.+|++.-.-..|.+.|.++++.+..+.+..+ .-...++-.+-+++-.+..++.|.++|-.
T Consensus 144 ~HiNsV~~~~~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG~~~~df~~~~~~f~~QHdar~~~~~~~~~~IslFDN~ 220 (299)
T PF14269_consen 144 FHINSVDKDDDGDYLISSRNTSTIYKIDPSTGKIIWRLGGKRNSDFTLPATNFSWQHDARFLNESNDDGTISLFDNA 220 (299)
T ss_pred cEeeeeeecCCccEEEEecccCEEEEEECCCCcEEEEeCCCCCCcccccCCcEeeccCCEEeccCCCCCEEEEEcCC
Confidence 3578889999999999999999999999999988887764411 11124444455666666778889998863
No 392
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=93.02 E-value=1.9 Score=29.07 Aligned_cols=70 Identities=14% Similarity=0.158 Sum_probs=41.1
Q ss_pred EEEECCCCCEEEEEeCC-----------CcEEEEEcCCCce--eEEeCCCCCc--eeEEEEccCCCeEEEeec---C-Ce
Q psy14458 53 ALCVDPSGRLMVSGHED-----------SSCVLYDIRGSRP--LQTFKPHTAD--VRSIRFSPSAYYLLTGGY---D-NK 113 (125)
Q Consensus 53 ~~~~~~~~~~~~~~~~~-----------~~i~~~d~~~~~~--~~~~~~~~~~--v~~~~~~~~~~~~~~~~~---d-~~ 113 (125)
.+.|.+++..++-...+ ..|+.|.+-+... ...+...... ...+..++|+++++..+. + ..
T Consensus 174 ~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~ 253 (414)
T PF02897_consen 174 SVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESE 253 (414)
T ss_dssp EEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEE
T ss_pred eEEEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCe
Confidence 38999997765444322 2377787766532 2445433332 457888999998765432 2 34
Q ss_pred EEEEeCCCC
Q psy14458 114 LVLTDLQGT 122 (125)
Q Consensus 114 i~~~~~~~~ 122 (125)
+.+.++...
T Consensus 254 v~~~d~~~~ 262 (414)
T PF02897_consen 254 VYLLDLDDG 262 (414)
T ss_dssp EEEEECCCT
T ss_pred EEEEecccc
Confidence 777777764
No 393
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=92.42 E-value=2.5 Score=29.06 Aligned_cols=35 Identities=14% Similarity=0.205 Sum_probs=21.7
Q ss_pred CceeEEEEccCCCeEEE-eecCCeEEEEeCCCCCCC
Q psy14458 91 ADVRSIRFSPSAYYLLT-GGYDNKLVLTDLQGTMRP 125 (125)
Q Consensus 91 ~~v~~~~~~~~~~~~~~-~~~d~~i~~~~~~~~~~~ 125 (125)
.-++.|..|.|.++|.. +-.+|.++.||+....+|
T Consensus 312 ~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~P 347 (461)
T PF05694_consen 312 PLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNP 347 (461)
T ss_dssp -----EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-
T ss_pred CceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCC
Confidence 34678899998887754 558999999999887765
No 394
>KOG3630|consensus
Probab=92.27 E-value=0.32 Score=36.90 Aligned_cols=70 Identities=14% Similarity=0.051 Sum_probs=50.0
Q ss_pred CCeEEEEECCCC-CEEEEEeCCCcEEEEEcCCCc-eeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeC
Q psy14458 49 SPVSALCVDPSG-RLMVSGHEDSSCVLYDIRGSR-PLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDL 119 (125)
Q Consensus 49 ~~i~~~~~~~~~-~~~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~ 119 (125)
....++.|.|.- ...+....|+.|++..+.... .+..+. .....++++|+|.|+.++.|-..|++.-|..
T Consensus 156 vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s~p-~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P 227 (1405)
T KOG3630|consen 156 VFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTSFP-VTNSQTAVLWSPRGKQLFIGRNNGTEVQYEP 227 (1405)
T ss_pred cccccccccCCccchhhhhccccchhhhhhhhhhhhhcccC-cccceeeEEeccccceeeEecCCCeEEEeec
Confidence 345677888864 234555678888888765432 233333 5567889999999999999999999887754
No 395
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=92.10 E-value=1.8 Score=26.69 Aligned_cols=47 Identities=21% Similarity=0.307 Sum_probs=35.6
Q ss_pred CEEEEEeCCCcEEEEEcCC--CceeEEeCCCCCceeEEEEccCCCeEEEe
Q psy14458 61 RLMVSGHEDSSCVLYDIRG--SRPLQTFKPHTADVRSIRFSPSAYYLLTG 108 (125)
Q Consensus 61 ~~~~~~~~~~~i~~~d~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 108 (125)
..++.+...+.|.+|++.. .+....|.. -+.|..+.++..|+++++-
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~T-v~~V~~l~y~~~GDYlvTl 77 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFST-VGRVLQLVYSEAGDYLVTL 77 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcc-hhheeEEEeccccceEEEE
Confidence 4444446677799999983 456667764 4789999999999999985
No 396
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=92.09 E-value=2.3 Score=27.78 Aligned_cols=69 Identities=12% Similarity=0.227 Sum_probs=40.0
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEe
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTD 118 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~ 118 (125)
..+..+.-++++.+++.+.......-||.-...-...-+.....+..+.|.|++.+.+.+ ..+.|+.-+
T Consensus 145 gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~ 213 (302)
T PF14870_consen 145 GSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSD 213 (302)
T ss_dssp --EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE
T ss_pred ceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEcc
Confidence 567888888999988888665555667643222222233356789999999998776654 777777765
No 397
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=92.00 E-value=1.8 Score=29.23 Aligned_cols=69 Identities=19% Similarity=0.131 Sum_probs=35.3
Q ss_pred EECCCCCEEEEE-eCCCc--EEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 55 CVDPSGRLMVSG-HEDSS--CVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 55 ~~~~~~~~~~~~-~~~~~--i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+|.++|+.|+.+ ..+|. +++.|+.+++..+.-.+.........++|+.+.++-...+..+.-.|+++..
T Consensus 42 ~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e 113 (386)
T PF14583_consen 42 CFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLE 113 (386)
T ss_dssp -B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--
T ss_pred CcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCc
Confidence 567788655544 44544 7777888777555333211222346677877776655556678888887753
No 398
>KOG1916|consensus
Probab=91.96 E-value=0.19 Score=37.23 Aligned_cols=35 Identities=31% Similarity=0.523 Sum_probs=28.5
Q ss_pred ECCCCCEEEEEeCCCcEEEEEcCC-----CceeEEeCCCC
Q psy14458 56 VDPSGRLMVSGHEDSSCVLYDIRG-----SRPLQTFKPHT 90 (125)
Q Consensus 56 ~~~~~~~~~~~~~~~~i~~~d~~~-----~~~~~~~~~~~ 90 (125)
++|+|..++.++.||.++.|.+.- ..++..++.|.
T Consensus 243 lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~rclhewkphd 282 (1283)
T KOG1916|consen 243 LSPDGTVFAWAISDGSVGFYQIYITGKIVHRCLHEWKPHD 282 (1283)
T ss_pred eCCCCcEEEEeecCCccceeeeeeeccccHhhhhccCCCC
Confidence 899999999999999999998752 35666666666
No 399
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=91.91 E-value=0.53 Score=20.16 Aligned_cols=26 Identities=19% Similarity=0.248 Sum_probs=22.1
Q ss_pred EEEEEeCCCcEEEEEcCCCceeEEeC
Q psy14458 62 LMVSGHEDSSCVLYDIRGSRPLQTFK 87 (125)
Q Consensus 62 ~~~~~~~~~~i~~~d~~~~~~~~~~~ 87 (125)
.++.++.+|.++..|.++++.+..+.
T Consensus 2 ~v~~~~~~g~l~AlD~~TG~~~W~~~ 27 (38)
T PF01011_consen 2 RVYVGTPDGYLYALDAKTGKVLWKFQ 27 (38)
T ss_dssp EEEEETTTSEEEEEETTTTSEEEEEE
T ss_pred EEEEeCCCCEEEEEECCCCCEEEeee
Confidence 35566899999999999999988876
No 400
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=91.78 E-value=0.47 Score=19.29 Aligned_cols=26 Identities=19% Similarity=0.244 Sum_probs=20.5
Q ss_pred CEEEEEeCCCcEEEEEcCCCceeEEe
Q psy14458 61 RLMVSGHEDSSCVLYDIRGSRPLQTF 86 (125)
Q Consensus 61 ~~~~~~~~~~~i~~~d~~~~~~~~~~ 86 (125)
..++.++.++.+..+|..+++....+
T Consensus 7 ~~v~~~~~~g~l~a~d~~~G~~~W~~ 32 (33)
T smart00564 7 GTVYVGSTDGTLYALDAKTGEILWTY 32 (33)
T ss_pred CEEEEEcCCCEEEEEEcccCcEEEEc
Confidence 35777888999999999888876543
No 401
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=91.64 E-value=4.1 Score=29.88 Aligned_cols=116 Identities=9% Similarity=0.210 Sum_probs=67.3
Q ss_pred CeeecCCCeEEEEECCCCc-ceeeecCCCCC-eEEEEecCcccccccCCCCCeEEEEEC--CCCCEEEEEeCCCcEEEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSR-PLQTFKPHTAD-VRSIHLDHYTTEAGTRQGSPVSALCVD--PSGRLMVSGHEDSSCVLYD 76 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~-~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~i~~~d 76 (125)
|+.+..||.|.+|....-- .+......... -......+. .....+...++++++ ...+++|.+++...|.||=
T Consensus 117 Ll~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~---f~~~v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFa 193 (717)
T PF08728_consen 117 LLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPF---FHLRVGASAWGLDIHDYKKSRLIAVSSNSQEVTVFA 193 (717)
T ss_pred EEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCC---eEeecCCceeEEEEEecCcceEEEEecCCceEEEEE
Confidence 5678899999999874321 11111000000 000111111 112233678899998 7788899998888888876
Q ss_pred cCCC-ceeEEe--CCCCCceeEEEEccCC---C---eEEEeecCCeEEEEeC
Q psy14458 77 IRGS-RPLQTF--KPHTADVRSIRFSPSA---Y---YLLTGGYDNKLVLTDL 119 (125)
Q Consensus 77 ~~~~-~~~~~~--~~~~~~v~~~~~~~~~---~---~~~~~~~d~~i~~~~~ 119 (125)
.... +..... ..+..-|-+|+|-++. . .+++++-.|.+.+|++
T Consensus 194 f~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 194 FALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred EeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 5432 111111 1244567889887732 2 6777888999888876
No 402
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=91.64 E-value=1.8 Score=25.62 Aligned_cols=30 Identities=30% Similarity=0.308 Sum_probs=24.5
Q ss_pred ceeEEEEccC------CCeEEEeecCCeEEEEeCCC
Q psy14458 92 DVRSIRFSPS------AYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 92 ~v~~~~~~~~------~~~~~~~~~d~~i~~~~~~~ 121 (125)
.+..++|+|. +.+|++.+.++.+.+|....
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence 6788999993 35788899999999997653
No 403
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=91.45 E-value=2.4 Score=26.80 Aligned_cols=71 Identities=17% Similarity=0.290 Sum_probs=47.5
Q ss_pred CCeEEEEECCCC-CEEEEEeCCCcEEEEEcCCCceeEEeCCC-CCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 49 SPVSALCVDPSG-RLMVSGHEDSSCVLYDIRGSRPLQTFKPH-TADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 49 ~~i~~~~~~~~~-~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
..+..++|+|+. .+++..+..+.|..++. .++.+..+... .+-.-.|.+..++.++++.-.++.+.++++.
T Consensus 22 ~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~ 94 (248)
T PF06977_consen 22 DELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTID 94 (248)
T ss_dssp S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE-
T ss_pred CCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEe
Confidence 458999999975 56677777888888885 57777766532 2345678887777777765558888888873
No 404
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=91.40 E-value=2.8 Score=27.43 Aligned_cols=72 Identities=11% Similarity=0.217 Sum_probs=45.7
Q ss_pred CCeEEEEECCCCCEEEEEeCC-CcEEEEEcCC--C----ce-eEEeCCCCCceeEEEEccCCCeEEEeecC-CeEEEEeC
Q psy14458 49 SPVSALCVDPSGRLMVSGHED-SSCVLYDIRG--S----RP-LQTFKPHTADVRSIRFSPSAYYLLTGGYD-NKLVLTDL 119 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~-~~i~~~d~~~--~----~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~d-~~i~~~~~ 119 (125)
..-+.++|||+++.+..+... +.|+-+++.. + +. ...+....+..=.++...+|.+.+++-.+ +.|..|+.
T Consensus 163 ~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~p 242 (307)
T COG3386 163 TIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNP 242 (307)
T ss_pred EecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECC
Confidence 456799999999877776554 7788887652 1 11 22222334444557777788777544333 37888887
Q ss_pred C
Q psy14458 120 Q 120 (125)
Q Consensus 120 ~ 120 (125)
+
T Consensus 243 d 243 (307)
T COG3386 243 D 243 (307)
T ss_pred C
Confidence 6
No 405
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=91.18 E-value=2.7 Score=30.00 Aligned_cols=66 Identities=11% Similarity=0.064 Sum_probs=39.8
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEEcCCC--ceeEEeCCCCCceeEEEEccCCCeEEEee-cCCeEEEEeC
Q psy14458 53 ALCVDPSGRLMVSGHEDSSCVLYDIRGS--RPLQTFKPHTADVRSIRFSPSAYYLLTGG-YDNKLVLTDL 119 (125)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~d~~i~~~~~ 119 (125)
.+.|+|....++.-.....--+++++.. +....++ ..+.|+|.+|.+||+.++.+- ..=.-++||-
T Consensus 117 GCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~-~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~ 185 (671)
T PF15390_consen 117 GCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIK-TSGLIHCACWTKDGQRLVVAVGSSLHSYIWDS 185 (671)
T ss_pred cccccCCCceEEEEecCceeEeeeeeeCCceEEEecc-CCceEEEEEecCcCCEEEEEeCCeEEEEEecC
Confidence 4568887776655544433334444432 2223343 567899999999997766543 3444678874
No 406
>PRK10115 protease 2; Provisional
Probab=91.07 E-value=3.1 Score=30.37 Aligned_cols=72 Identities=4% Similarity=0.087 Sum_probs=45.5
Q ss_pred CCeEEEEECCCCCEEEEEe-----CCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecC------CeEEEE
Q psy14458 49 SPVSALCVDPSGRLMVSGH-----EDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYD------NKLVLT 117 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~-----~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d------~~i~~~ 117 (125)
-.+..+.++|++++++.+. +...|++.|+.+++.+...-.... ..+.|.+|++.|+-...+ ..++.+
T Consensus 127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h 204 (686)
T PRK10115 127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE--PSFVWANDSWTFYYVRKHPVTLLPYQVWRH 204 (686)
T ss_pred EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc--eEEEEeeCCCEEEEEEecCCCCCCCEEEEE
Confidence 3467788999998876643 334488888887753322211111 458999988766554432 357777
Q ss_pred eCCCC
Q psy14458 118 DLQGT 122 (125)
Q Consensus 118 ~~~~~ 122 (125)
++.++
T Consensus 205 ~lgt~ 209 (686)
T PRK10115 205 TIGTP 209 (686)
T ss_pred ECCCC
Confidence 77765
No 407
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=91.01 E-value=4.9 Score=29.60 Aligned_cols=34 Identities=21% Similarity=0.254 Sum_probs=29.2
Q ss_pred CCCCCeEEEEECCC---CCEEEEEeCCCcEEEEEcCC
Q psy14458 46 RQGSPVSALCVDPS---GRLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 46 ~~~~~i~~~~~~~~---~~~~~~~~~~~~i~~~d~~~ 79 (125)
.....|..+.|+|. +..++.-..|+.+++||+..
T Consensus 144 ~~~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~ 180 (717)
T PF10168_consen 144 NSSLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISD 180 (717)
T ss_pred CCCceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCC
Confidence 44578999999996 58899999999999999975
No 408
>KOG2377|consensus
Probab=90.58 E-value=4.4 Score=28.27 Aligned_cols=70 Identities=11% Similarity=0.161 Sum_probs=45.1
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEcCCC--ceeEEeC-CCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 51 VSALCVDPSGRLMVSGHEDSSCVLYDIRGS--RPLQTFK-PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 51 i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~--~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
.+.+-|+. .+..+.+...|.+.-|-++.. ...-++. ..++++.++.|++|.+.++.-..|.+|.+++...
T Consensus 25 sngvFfDD-aNkqlfavrSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~ 97 (657)
T KOG2377|consen 25 SNGVFFDD-ANKQLFAVRSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIP 97 (657)
T ss_pred ccceeecc-CcceEEEEecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCC
Confidence 34444443 333333344555555554432 2222332 4677999999999999999999999999998743
No 409
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=90.30 E-value=3.6 Score=26.81 Aligned_cols=73 Identities=15% Similarity=0.255 Sum_probs=53.3
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCC-CCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPH-TADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
..+.++.|+|+.+.+++..+....-++-...|+.+..+... -..--.+.|..++++.++-=.++.+.++.+..
T Consensus 86 ~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~ 159 (316)
T COG3204 86 ANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDA 159 (316)
T ss_pred ccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcC
Confidence 45899999999999888888888777777788888877621 11223577777777777766677777776543
No 410
>PRK13616 lipoprotein LpqB; Provisional
Probab=90.08 E-value=5.5 Score=28.64 Aligned_cols=69 Identities=13% Similarity=0.094 Sum_probs=41.4
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEE---EEcCCCc-ee---EEeC-CCCCceeEEEEccCCCeEEEeecCCeEEEEe
Q psy14458 48 GSPVSALCVDPSGRLMVSGHEDSSCVL---YDIRGSR-PL---QTFK-PHTADVRSIRFSPSAYYLLTGGYDNKLVLTD 118 (125)
Q Consensus 48 ~~~i~~~~~~~~~~~~~~~~~~~~i~~---~d~~~~~-~~---~~~~-~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~ 118 (125)
...|..+.|||+|..++... ++.|++ -....++ .+ ..+. .....+..+.|.+++.++ .+..++...+|.
T Consensus 447 ~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~ 523 (591)
T PRK13616 447 PGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVWY 523 (591)
T ss_pred CCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCCccccceEecCCEEE-EEecCCCCceEE
Confidence 45799999999999887765 467776 3333343 11 1122 223335789999998865 444433333443
No 411
>PHA02713 hypothetical protein; Provisional
Probab=89.88 E-value=3.4 Score=29.34 Aligned_cols=63 Identities=8% Similarity=0.058 Sum_probs=37.0
Q ss_pred CCCEEEEEeCC------CcEEEEEcCC-Cce--eEEeCCCCCceeEEEEccCCCeEEEeecCC--eEEEEeCCCCC
Q psy14458 59 SGRLMVSGHED------SSCVLYDIRG-SRP--LQTFKPHTADVRSIRFSPSAYYLLTGGYDN--KLVLTDLQGTM 123 (125)
Q Consensus 59 ~~~~~~~~~~~------~~i~~~d~~~-~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~--~i~~~~~~~~~ 123 (125)
++...+.|+.+ ..+..||..+ .+. +..+.........+.+ ++++.+.|+.++ .+..||..+..
T Consensus 463 ~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~~~~~ 536 (557)
T PHA02713 463 KDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILH--DNTIMMLHCYESYMLQDTFNVYTYE 536 (557)
T ss_pred CCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEE--CCEEEEEeeecceeehhhcCccccc
Confidence 35555555533 2467899887 443 2333322222333333 888999999888 67777776653
No 412
>KOG2247|consensus
Probab=89.86 E-value=0.16 Score=35.02 Aligned_cols=53 Identities=21% Similarity=0.297 Sum_probs=42.3
Q ss_pred EEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEE
Q psy14458 54 LCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLL 106 (125)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 106 (125)
.+|++....++.+...|.+.+++-.+.+.+-..-.|...+.++++.+.+..+.
T Consensus 123 l~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~vil 175 (615)
T KOG2247|consen 123 LAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDYVIL 175 (615)
T ss_pred HhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccceeee
Confidence 67888888899999999999999877666555555888899999988764433
No 413
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=89.73 E-value=0.96 Score=19.40 Aligned_cols=31 Identities=13% Similarity=0.252 Sum_probs=21.8
Q ss_pred CCCCEEEEEe-CCCcEEEEEcCCCceeEEeCC
Q psy14458 58 PSGRLMVSGH-EDSSCVLYDIRGSRPLQTFKP 88 (125)
Q Consensus 58 ~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~ 88 (125)
|+++.++.++ .++.|.++|..+++.+..+..
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v 32 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV 32 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC
Confidence 4566555544 578899999988877776664
No 414
>COG5308 NUP170 Nuclear pore complex subunit [Intracellular trafficking and secretion]
Probab=89.39 E-value=7.2 Score=29.62 Aligned_cols=73 Identities=15% Similarity=0.236 Sum_probs=48.0
Q ss_pred CCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC-----------------Cc-------eeEEeCCCCCceeEEEEccC
Q psy14458 46 RQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRG-----------------SR-------PLQTFKPHTADVRSIRFSPS 101 (125)
Q Consensus 46 ~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~-----------------~~-------~~~~~~~~~~~v~~~~~~~~ 101 (125)
.++..|.|+.-+.+|..+++|-.| +.+|.+.- +. ....+..+...+..++....
T Consensus 179 vqGinV~civs~e~GrIFf~g~~d--~nvyEl~Y~~sd~wfnskcskiclTkS~l~sllPs~~~~~ipgetI~Ql~vDqs 256 (1263)
T COG5308 179 VQGINVRCIVSEEDGRIFFGGEND--PNVYELVYKSSDSWFNSKCSKICLTKSILSSLLPSFFSFGIPGETIKQLAVDQS 256 (1263)
T ss_pred ccCceeEEEEeccCCcEEEecCCC--CCeEEEEEeccchhhhhhhhccCCcHHHHHhhcccccccCCcccchhheeeccc
Confidence 455778899888889988888777 66666531 00 01112234566777777776
Q ss_pred CCeEEEeecCCeEEEEeCC
Q psy14458 102 AYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 102 ~~~~~~~~~d~~i~~~~~~ 120 (125)
...+.+-+....++.+.+.
T Consensus 257 Rg~ly~Lr~kS~Vray~it 275 (1263)
T COG5308 257 RGLLYVLRKKSAVRAYSIT 275 (1263)
T ss_pred ccceeeecccceeeeEeee
Confidence 6777777777778777654
No 415
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=88.83 E-value=4.5 Score=25.90 Aligned_cols=93 Identities=12% Similarity=0.171 Sum_probs=55.6
Q ss_pred CCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEe
Q psy14458 7 DSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTF 86 (125)
Q Consensus 7 d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~ 86 (125)
++...+||..+.+.+..+.-. ..=..++ .++..++..+....++++|..+-+....+
T Consensus 109 ~~~~f~yd~~tl~~~~~~~y~---------------------~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i 165 (264)
T PF05096_consen 109 EGTGFVYDPNTLKKIGTFPYP---------------------GEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTI 165 (264)
T ss_dssp SSEEEEEETTTTEEEEEEE-S---------------------SS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEE
T ss_pred CCeEEEEccccceEEEEEecC---------------------CcceEEE--cCCCEEEEECCccceEEECCcccceEEEE
Confidence 455667777666665555421 1223444 35677888877888999998876655555
Q ss_pred CC--CCC---ceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 87 KP--HTA---DVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 87 ~~--~~~---~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.- ... .++.+.|. +|.+.+..-....|...|..++.
T Consensus 166 ~V~~~g~pv~~LNELE~i-~G~IyANVW~td~I~~Idp~tG~ 206 (264)
T PF05096_consen 166 QVTDNGRPVSNLNELEYI-NGKIYANVWQTDRIVRIDPETGK 206 (264)
T ss_dssp E-EETTEE---EEEEEEE-TTEEEEEETTSSEEEEEETTT-B
T ss_pred EEEECCEECCCcEeEEEE-cCEEEEEeCCCCeEEEEeCCCCe
Confidence 42 222 34556664 78888888888888888877763
No 416
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=88.82 E-value=4.5 Score=25.89 Aligned_cols=53 Identities=13% Similarity=0.187 Sum_probs=36.3
Q ss_pred eCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 67 HEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 67 ~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
=.++...+||..+-+.+..+. ..+.=+.++. |++.++...+...++++|..+.
T Consensus 107 Wk~~~~f~yd~~tl~~~~~~~-y~~EGWGLt~--dg~~Li~SDGS~~L~~~dP~~f 159 (264)
T PF05096_consen 107 WKEGTGFVYDPNTLKKIGTFP-YPGEGWGLTS--DGKRLIMSDGSSRLYFLDPETF 159 (264)
T ss_dssp SSSSEEEEEETTTTEEEEEEE--SSS--EEEE--CSSCEEEE-SSSEEEEE-TTT-
T ss_pred ecCCeEEEEccccceEEEEEe-cCCcceEEEc--CCCEEEEECCccceEEECCccc
Confidence 377889999999888888876 3344455653 7778888777888999997653
No 417
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=88.41 E-value=7.8 Score=28.15 Aligned_cols=92 Identities=17% Similarity=0.265 Sum_probs=51.4
Q ss_pred CCCeEEEEECCCCcceeeec-CCCCCeEEEEecCcccccccCCCCCeEEEEEC--CCCCEEEEEeCCCcEEEEEcC----
Q psy14458 6 EDSSCVLYDIRGSRPLQTFK-PHTADVRSIHLDHYTTEAGTRQGSPVSALCVD--PSGRLMVSGHEDSSCVLYDIR---- 78 (125)
Q Consensus 6 ~d~~i~v~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~i~~~d~~---- 78 (125)
...++.|||.+.+.....-. .... .|.++.|. |++..+++.+-.+.|.++.-.
T Consensus 49 ~~~~LtIWD~~~~~lE~~~~f~~~~--------------------~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy 108 (631)
T PF12234_consen 49 SRSELTIWDTRSGVLEYEESFSEDD--------------------PIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDY 108 (631)
T ss_pred CCCEEEEEEcCCcEEEEeeeecCCC--------------------ceeeceeeecCCCCEEEEEEcCcEEEEEEccchhh
Confidence 34577899987766433211 2343 44555544 355666666666777666431
Q ss_pred -CC----ceeEEe--CCCC-CceeEEEEccCCCeEEEeecCCeEEEEeC
Q psy14458 79 -GS----RPLQTF--KPHT-ADVRSIRFSPSAYYLLTGGYDNKLVLTDL 119 (125)
Q Consensus 79 -~~----~~~~~~--~~~~-~~v~~~~~~~~~~~~~~~~~d~~i~~~~~ 119 (125)
.. ..+..+ ..+. .+|....|.++|.+++.++ ..+.++|-
T Consensus 109 ~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk 155 (631)
T PF12234_consen 109 TNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDK 155 (631)
T ss_pred hcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEECC
Confidence 11 122222 2333 5688899999986665543 45666653
No 418
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=88.16 E-value=5.6 Score=26.18 Aligned_cols=71 Identities=15% Similarity=0.092 Sum_probs=49.8
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcC------CC-ceeEEeCC-----CCCceeEEEEccCCCe------------
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIR------GS-RPLQTFKP-----HTADVRSIRFSPSAYY------------ 104 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~------~~-~~~~~~~~-----~~~~v~~~~~~~~~~~------------ 104 (125)
..-+.|+++|.+.+.++....+...+||.. .. ..+..+.. .....+.+.|+....+
T Consensus 23 ~N~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~ 102 (336)
T TIGR03118 23 RNAWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSR 102 (336)
T ss_pred cccceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCccccee
Confidence 345789999999999999889999999986 12 23333331 1234566666643333
Q ss_pred EEEeecCCeEEEEeC
Q psy14458 105 LLTGGYDNKLVLTDL 119 (125)
Q Consensus 105 ~~~~~~d~~i~~~~~ 119 (125)
++.+++||+|.-|..
T Consensus 103 Fif~tEdGTisaW~p 117 (336)
T TIGR03118 103 FLFVTEDGTLSGWAP 117 (336)
T ss_pred EEEEeCCceEEeecC
Confidence 577889999999985
No 419
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=87.86 E-value=1.4 Score=18.76 Aligned_cols=29 Identities=17% Similarity=0.249 Sum_probs=18.5
Q ss_pred CCCceeEEEEccCCCeEEEeec-C--CeEEEE
Q psy14458 89 HTADVRSIRFSPSAYYLLTGGY-D--NKLVLT 117 (125)
Q Consensus 89 ~~~~v~~~~~~~~~~~~~~~~~-d--~~i~~~ 117 (125)
....-....|+|||+.|+-.+. + |...||
T Consensus 7 ~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 7 SPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred CCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 3445567899999988876654 4 555554
No 420
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=87.77 E-value=7.5 Score=27.22 Aligned_cols=71 Identities=18% Similarity=0.224 Sum_probs=46.7
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 51 VSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 51 i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+..+.-..+.+-+++-+.+|.+.++.....+.+. ++..-.....+.++|++.++++-. .|.++++.++++.
T Consensus 319 ~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL-~~~~~~~~~~~~~Sp~~~~Ll~e~-~gki~~~~l~Nr~ 389 (733)
T COG4590 319 VQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLL-FERAYQAPQLVAMSPNQAYLLSED-QGKIRLAQLENRN 389 (733)
T ss_pred ceeeccccccceEEEEcCCCceeeeecccCccee-hhhhhcCcceeeeCcccchheeec-CCceEEEEecCCC
Confidence 3333333345667777888888888655444443 332334567899999998888764 4668888887654
No 421
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=87.34 E-value=1.5 Score=18.81 Aligned_cols=21 Identities=19% Similarity=0.123 Sum_probs=16.2
Q ss_pred CCCeEEEeecCCeEEEEeCCC
Q psy14458 101 SAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 101 ~~~~~~~~~~d~~i~~~~~~~ 121 (125)
.+..+..++.|+.++.+|.++
T Consensus 20 ~~g~vyv~~~dg~l~ald~~t 40 (40)
T PF13570_consen 20 AGGRVYVGTGDGNLYALDAAT 40 (40)
T ss_dssp CTSEEEEE-TTSEEEEEETT-
T ss_pred ECCEEEEEcCCCEEEEEeCCC
Confidence 556888889999999999764
No 422
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=87.15 E-value=1.4 Score=23.15 Aligned_cols=18 Identities=6% Similarity=0.196 Sum_probs=13.0
Q ss_pred CCeEEEEECCCCCEEEEE
Q psy14458 49 SPVSALCVDPSGRLMVSG 66 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~ 66 (125)
...+.+++++++.+++.+
T Consensus 57 ~fpNGVals~d~~~vlv~ 74 (89)
T PF03088_consen 57 YFPNGVALSPDESFVLVA 74 (89)
T ss_dssp SSEEEEEE-TTSSEEEEE
T ss_pred CccCeEEEcCCCCEEEEE
Confidence 356899999999876655
No 423
>PHA02713 hypothetical protein; Provisional
Probab=86.25 E-value=10 Score=27.11 Aligned_cols=51 Identities=10% Similarity=0.176 Sum_probs=27.3
Q ss_pred CCCEEEEEeCCC-----cEEEEEcCCCceeE--EeCCCCCceeEEEEccCCCeEEEeecC
Q psy14458 59 SGRLMVSGHEDS-----SCVLYDIRGSRPLQ--TFKPHTADVRSIRFSPSAYYLLTGGYD 111 (125)
Q Consensus 59 ~~~~~~~~~~~~-----~i~~~d~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~d 111 (125)
++...+.|+.++ .+..||..+.+... .+.........+.+ ++.+.+.|+.+
T Consensus 351 ~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~~--~g~IYviGG~~ 408 (557)
T PHA02713 351 DDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCVL--DQYIYIIGGRT 408 (557)
T ss_pred CCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEEE--CCEEEEEeCCC
Confidence 456666666543 47889987754322 22211111112222 78888888765
No 424
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=85.51 E-value=5.9 Score=25.63 Aligned_cols=54 Identities=17% Similarity=0.229 Sum_probs=37.9
Q ss_pred CCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEee------cCCeEEEEeCCCC
Q psy14458 69 DSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGG------YDNKLVLTDLQGT 122 (125)
Q Consensus 69 ~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~------~d~~i~~~~~~~~ 122 (125)
...|.+||..+.+....-..-.+.|+.+.|.-+.++++.|. ....+..||+.+.
T Consensus 15 C~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~ 74 (281)
T PF12768_consen 15 CPGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQ 74 (281)
T ss_pred CCEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCC
Confidence 44588999877765554445677899999987777777775 3445777777654
No 425
>KOG4441|consensus
Probab=85.34 E-value=7.6 Score=27.83 Aligned_cols=62 Identities=24% Similarity=0.260 Sum_probs=34.5
Q ss_pred CCCEEEEEeCC------CcEEEEEcCCCceeEEeCCCCCceeEEEEc-cCCCeEEEeecCCe-----EEEEeCCC
Q psy14458 59 SGRLMVSGHED------SSCVLYDIRGSRPLQTFKPHTADVRSIRFS-PSAYYLLTGGYDNK-----LVLTDLQG 121 (125)
Q Consensus 59 ~~~~~~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~d~~-----i~~~~~~~ 121 (125)
++...++|+.+ ..+..||.++.+....-....... ..... -+|.+.+.|+.||. +..||..+
T Consensus 332 ~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~-~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~ 405 (571)
T KOG4441|consen 332 NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRS-DFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVT 405 (571)
T ss_pred CCEEEEEccccCCCcccceEEEecCCCCceeccCCccCccc-cceeEEECCEEEEEeccccccccccEEEecCCC
Confidence 34566777777 457788888766433111111111 11111 18888899988865 55555544
No 426
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=85.02 E-value=8.6 Score=25.22 Aligned_cols=63 Identities=14% Similarity=0.208 Sum_probs=36.9
Q ss_pred CCeEEEEECCCCCEEEEEeC------------------CCcEEEEEcCCCceeEEeC----CCCCceeEEEEccCCCeEE
Q psy14458 49 SPVSALCVDPSGRLMVSGHE------------------DSSCVLYDIRGSRPLQTFK----PHTADVRSIRFSPSAYYLL 106 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~------------------~~~i~~~d~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~ 106 (125)
-.-..+.|.++|+.++.+.. .-++-+.|..+++.+.... .+.-.+++++..+||..++
T Consensus 162 iGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwf 241 (366)
T COG3490 162 IGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWF 241 (366)
T ss_pred cCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEE
Confidence 45567788888888777642 1223333434444333221 2344678888888888777
Q ss_pred EeecC
Q psy14458 107 TGGYD 111 (125)
Q Consensus 107 ~~~~d 111 (125)
.+-..
T Consensus 242 gcQy~ 246 (366)
T COG3490 242 GCQYR 246 (366)
T ss_pred EEEee
Confidence 66543
No 427
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=84.92 E-value=4.1 Score=21.42 Aligned_cols=50 Identities=12% Similarity=0.054 Sum_probs=28.5
Q ss_pred eCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEe-ec-CCeEEEE
Q psy14458 67 HEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTG-GY-DNKLVLT 117 (125)
Q Consensus 67 ~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~-d~~i~~~ 117 (125)
..+|.+..||..+++....+..- ..-+.+++++|+.+++.+ +. -+..+.|
T Consensus 34 ~~~GRll~ydp~t~~~~vl~~~L-~fpNGVals~d~~~vlv~Et~~~Ri~ryw 85 (89)
T PF03088_consen 34 RPTGRLLRYDPSTKETTVLLDGL-YFPNGVALSPDESFVLVAETGRYRILRYW 85 (89)
T ss_dssp ---EEEEEEETTTTEEEEEEEEE-SSEEEEEE-TTSSEEEEEEGGGTEEEEEE
T ss_pred CCCcCEEEEECCCCeEEEehhCC-CccCeEEEcCCCCEEEEEeccCceEEEEE
Confidence 36688888998887754434321 234679999999866553 33 3334444
No 428
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=84.89 E-value=9.3 Score=25.49 Aligned_cols=31 Identities=13% Similarity=0.089 Sum_probs=24.1
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEeCCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHT 90 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 90 (125)
+|+ ++.++.++.++.+|.++++.+..+....
T Consensus 111 ~G~-i~~g~~~g~~y~ld~~~G~~~W~~~~~~ 141 (370)
T COG1520 111 DGK-IYVGSWDGKLYALDASTGTLVWSRNVGG 141 (370)
T ss_pred CCe-EEEecccceEEEEECCCCcEEEEEecCC
Confidence 444 7778888899999998898887776444
No 429
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=84.88 E-value=4 Score=30.19 Aligned_cols=68 Identities=16% Similarity=0.116 Sum_probs=44.5
Q ss_pred eeecCCCeEEEEECCCCcceeee---cCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEE
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTF---KPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCV 73 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~ 73 (125)
+....||+|.++|..+.+.+... ......|.++.-.+...... ..+.-++|||++..++.-..+|.+.
T Consensus 275 ~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~----~~~~~vafSPt~c~~v~~~~~~~~~ 345 (753)
T PF11635_consen 275 AFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCI----QPPLHVAFSPTMCSLVQIDEDGKTK 345 (753)
T ss_pred EEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccC----CCCceEEECcccceEEEEecCCCce
Confidence 45678999999999998776655 11222233332222222111 2566789999999999998888855
No 430
>PHA03098 kelch-like protein; Provisional
Probab=84.70 E-value=12 Score=26.42 Aligned_cols=49 Identities=12% Similarity=0.113 Sum_probs=27.0
Q ss_pred EEEEEcCCCceeEE--eCCCCCceeEEEEccCCCeEEEeecC-----CeEEEEeCCCC
Q psy14458 72 CVLYDIRGSRPLQT--FKPHTADVRSIRFSPSAYYLLTGGYD-----NKLVLTDLQGT 122 (125)
Q Consensus 72 i~~~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~d-----~~i~~~~~~~~ 122 (125)
+.+||..+.+.... +.........+.+ ++++++.|+.+ ..+..+|..+.
T Consensus 458 v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~ 513 (534)
T PHA03098 458 VESYNPVTNKWTELSSLNFPRINASLCIF--NNKIYVVGGDKYEYYINEIEVYDDKTN 513 (534)
T ss_pred EEEecCCCCceeeCCCCCcccccceEEEE--CCEEEEEcCCcCCcccceeEEEeCCCC
Confidence 78888877653321 1111111112222 77777777754 46888887764
No 431
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=84.36 E-value=12 Score=27.87 Aligned_cols=67 Identities=18% Similarity=0.163 Sum_probs=49.9
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEe----CC---------------CCCceeEEEEccCCCeEEEee
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTF----KP---------------HTADVRSIRFSPSAYYLLTGG 109 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~----~~---------------~~~~v~~~~~~~~~~~~~~~~ 109 (125)
..|.+++...-+.+++..-.||+|.++|-.+.+.+... .. .-..+..++|+|++..++.-.
T Consensus 260 ~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~~~ 339 (753)
T PF11635_consen 260 KRVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQID 339 (753)
T ss_pred CeEEEEEecccCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEEECcccceEEEEe
Confidence 67888888888889999999999999998775443333 10 111344688999999999888
Q ss_pred cCCeEE
Q psy14458 110 YDNKLV 115 (125)
Q Consensus 110 ~d~~i~ 115 (125)
.++.+.
T Consensus 340 ~~~~~~ 345 (753)
T PF11635_consen 340 EDGKTK 345 (753)
T ss_pred cCCCce
Confidence 888854
No 432
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=84.17 E-value=10 Score=25.52 Aligned_cols=70 Identities=16% Similarity=0.287 Sum_probs=46.4
Q ss_pred EEEEECCCCCEEEEEe-CCCcEEEEEcCCCceeE-E----eCCCCCceeEEEEccCCCeEEEeec-C--CeEEEEeCCCC
Q psy14458 52 SALCVDPSGRLMVSGH-EDSSCVLYDIRGSRPLQ-T----FKPHTADVRSIRFSPSAYYLLTGGY-D--NKLVLTDLQGT 122 (125)
Q Consensus 52 ~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~-~----~~~~~~~v~~~~~~~~~~~~~~~~~-d--~~i~~~~~~~~ 122 (125)
..++++|+++.+.... .++.|.+.|........ . .. -...-..+.++|++..+..... + +.+...|..++
T Consensus 163 ~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~-~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~ 241 (381)
T COG3391 163 TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVG-VGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATG 241 (381)
T ss_pred ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccc-cCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCc
Confidence 7899999998665554 78889999976654442 1 11 1222346889999986555433 2 57877777654
No 433
>KOG1916|consensus
Probab=84.10 E-value=0.53 Score=35.06 Aligned_cols=68 Identities=15% Similarity=0.187 Sum_probs=42.7
Q ss_pred eEEEEECC---CCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeE-----------EEEccCCCeEEEeecCCeEEE
Q psy14458 51 VSALCVDP---SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRS-----------IRFSPSAYYLLTGGYDNKLVL 116 (125)
Q Consensus 51 i~~~~~~~---~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~-----------~~~~~~~~~~~~~~~d~~i~~ 116 (125)
+.-+.|.| +..++..+..++.+++........ .-++.|..++.. -..+|||..++..+.||.+++
T Consensus 183 ~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f 261 (1283)
T KOG1916|consen 183 PQLVSWCPIAVNKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGF 261 (1283)
T ss_pred cceeeecccccccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccce
Confidence 34444554 345566677778888776654321 112334433222 237899999999999999998
Q ss_pred EeC
Q psy14458 117 TDL 119 (125)
Q Consensus 117 ~~~ 119 (125)
|.+
T Consensus 262 ~Qi 264 (1283)
T KOG1916|consen 262 YQI 264 (1283)
T ss_pred eee
Confidence 865
No 434
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=82.64 E-value=2.3 Score=16.80 Aligned_cols=23 Identities=0% Similarity=0.154 Sum_probs=14.4
Q ss_pred eEEEEccCCCeEEEeecCCeEEE
Q psy14458 94 RSIRFSPSAYYLLTGGYDNKLVL 116 (125)
Q Consensus 94 ~~~~~~~~~~~~~~~~~d~~i~~ 116 (125)
..++.+++|+++++=+....|.+
T Consensus 5 ~gvav~~~g~i~VaD~~n~rV~v 27 (28)
T PF01436_consen 5 HGVAVDSDGNIYVADSGNHRVQV 27 (28)
T ss_dssp EEEEEETTSEEEEEECCCTEEEE
T ss_pred cEEEEeCCCCEEEEECCCCEEEE
Confidence 45666667766666666655554
No 435
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=82.13 E-value=12 Score=24.62 Aligned_cols=71 Identities=20% Similarity=0.216 Sum_probs=44.1
Q ss_pred CCeEEEEECCCCCEEEEEeC-----------CCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEE-eecCCeEEE
Q psy14458 49 SPVSALCVDPSGRLMVSGHE-----------DSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLT-GGYDNKLVL 116 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~-----------~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~d~~i~~ 116 (125)
...+.....|+|.+.++.-. -|.++.+|. .+.....+..+-..-+.++|+||++.+.. =+..+.|.-
T Consensus 111 ~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r 189 (307)
T COG3386 111 NRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHR 189 (307)
T ss_pred CCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEE
Confidence 45667788888877665433 133444443 34444444444444568999999965544 456678888
Q ss_pred EeCC
Q psy14458 117 TDLQ 120 (125)
Q Consensus 117 ~~~~ 120 (125)
+++.
T Consensus 190 ~~~d 193 (307)
T COG3386 190 YDLD 193 (307)
T ss_pred EecC
Confidence 8765
No 436
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=82.12 E-value=19 Score=26.94 Aligned_cols=74 Identities=20% Similarity=0.318 Sum_probs=48.1
Q ss_pred CCeEEEEECCC-CCEEEEEeCCCcEEEEEcCCC----c-eeEEeCCCCCc----------eeEEEEccCCCeEEEeecCC
Q psy14458 49 SPVSALCVDPS-GRLMVSGHEDSSCVLYDIRGS----R-PLQTFKPHTAD----------VRSIRFSPSAYYLLTGGYDN 112 (125)
Q Consensus 49 ~~i~~~~~~~~-~~~~~~~~~~~~i~~~d~~~~----~-~~~~~~~~~~~----------v~~~~~~~~~~~~~~~~~d~ 112 (125)
.+...++|+|. ...||..+..|.-.||++... . .........+. -..+.|.++...++.++. .
T Consensus 146 ~~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r-~ 224 (765)
T PF10214_consen 146 FPHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNR-S 224 (765)
T ss_pred CccceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcC-C
Confidence 56789999995 478999999999999999211 1 11111111111 236778877767766644 4
Q ss_pred eEEEEeCCCCC
Q psy14458 113 KLVLTDLQGTM 123 (125)
Q Consensus 113 ~i~~~~~~~~~ 123 (125)
.+.++|+++..
T Consensus 225 ~l~~~d~~~~~ 235 (765)
T PF10214_consen 225 KLMLIDFESNW 235 (765)
T ss_pred ceEEEECCCCC
Confidence 57888887653
No 437
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=81.50 E-value=8.4 Score=26.25 Aligned_cols=31 Identities=29% Similarity=0.472 Sum_probs=25.6
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 79 (125)
..|..++..+..+.+++...+|.|.+|++..
T Consensus 190 ~~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~ 220 (422)
T PF08801_consen 190 PKIVQVAVDPSRRLLYTLTSDGSIQVWDLGP 220 (422)
T ss_dssp --EEEEEEETTTTEEEEEESSE-EEEEEE-S
T ss_pred hceeeEEecCCcCEEEEEeCCCcEEEEEEeC
Confidence 3499999999999999999999999999975
No 438
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=81.18 E-value=21 Score=26.82 Aligned_cols=64 Identities=14% Similarity=0.214 Sum_probs=44.0
Q ss_pred CCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCc--------eeEEEEc----------------cCCCeEEEeecCCeEE
Q psy14458 60 GRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTAD--------VRSIRFS----------------PSAYYLLTGGYDNKLV 115 (125)
Q Consensus 60 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--------v~~~~~~----------------~~~~~~~~~~~d~~i~ 115 (125)
+..++.++.++.|.-.|..+++.+..+...... ++.+.+- .++..++.++.|+.+.
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li 273 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI 273 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence 556777888999999999999988877632211 1223321 1334777788899888
Q ss_pred EEeCCCCC
Q psy14458 116 LTDLQGTM 123 (125)
Q Consensus 116 ~~~~~~~~ 123 (125)
-.|.+++.
T Consensus 274 ALDA~TGk 281 (764)
T TIGR03074 274 ALDADTGK 281 (764)
T ss_pred EEECCCCC
Confidence 88887764
No 439
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=80.81 E-value=9.5 Score=26.24 Aligned_cols=35 Identities=20% Similarity=0.224 Sum_probs=28.4
Q ss_pred CCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 89 HTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 89 ~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.+..+.++..+|++++.++.-.=|.|.++|+.++.
T Consensus 306 ~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~ 340 (415)
T PF14655_consen 306 SKREGESICLSPSGRLAAVTDSLGRVLLIDVARGI 340 (415)
T ss_pred CCceEEEEEECCCCCEEEEEcCCCcEEEEECCCCh
Confidence 34567889999999888887677889999998763
No 440
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=80.42 E-value=20 Score=26.06 Aligned_cols=40 Identities=13% Similarity=0.238 Sum_probs=27.0
Q ss_pred cccccccCCCCCeEEEEECCCCCEEEEEeCC-CcEEEEEcC
Q psy14458 39 YTTEAGTRQGSPVSALCVDPSGRLMVSGHED-SSCVLYDIR 78 (125)
Q Consensus 39 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~i~~~d~~ 78 (125)
............|.|.||.++|..++.+-.. =.-++||-.
T Consensus 146 srVkaDi~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~ 186 (671)
T PF15390_consen 146 SRVKADIKTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSA 186 (671)
T ss_pred ceEEEeccCCceEEEEEecCcCCEEEEEeCCeEEEEEecCc
Confidence 3333334556789999999999877665433 336788864
No 441
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=79.80 E-value=21 Score=27.28 Aligned_cols=75 Identities=13% Similarity=0.111 Sum_probs=46.0
Q ss_pred eEEEEecCcccccc-cCCCCCeEEEEECCCCCEEEE-EeCCC-----cEEEEEcCCC-ceeEEeCCCCCceeEEEEccCC
Q psy14458 31 VRSIHLDHYTTEAG-TRQGSPVSALCVDPSGRLMVS-GHEDS-----SCVLYDIRGS-RPLQTFKPHTADVRSIRFSPSA 102 (125)
Q Consensus 31 i~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~-~~~~~-----~i~~~d~~~~-~~~~~~~~~~~~v~~~~~~~~~ 102 (125)
+.-+..++...... .....++..-+|||+|+.++- .+-++ .|++.++.+. ..+..+.-....|-.-...++|
T Consensus 331 L~~~D~dG~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl~ve~aaiprwrv~e~g 410 (912)
T TIGR02171 331 LAYIDYTKGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKLPVENAAIPRWRVLENG 410 (912)
T ss_pred EEEEecCCCCceEEEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceEeecccccccceEecCCC
Confidence 33334444444433 455677888899999998876 34333 4889998763 3444455455666666666666
Q ss_pred CeE
Q psy14458 103 YYL 105 (125)
Q Consensus 103 ~~~ 105 (125)
...
T Consensus 411 dt~ 413 (912)
T TIGR02171 411 DTV 413 (912)
T ss_pred CeE
Confidence 544
No 442
>COG4880 Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats [General function prediction only]
Probab=79.63 E-value=18 Score=25.21 Aligned_cols=80 Identities=15% Similarity=0.159 Sum_probs=47.4
Q ss_pred CCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEcc--CCCeEEEeecCCe--EEEEeCCC
Q psy14458 46 RQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSP--SAYYLLTGGYDNK--LVLTDLQG 121 (125)
Q Consensus 46 ~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~d~~--i~~~~~~~ 121 (125)
+.+..|..+.|.-+--++++=-+.-.+.+.|+.+.+....+-..+=+=.+-..+| ++.++-.|..+|. |.++|...
T Consensus 425 ~~gERIYAvRf~gdv~yiVTfrqtDPlfviDlsNPenPkvlGeLKIPGfS~YLHpigen~~lGvG~~~g~vKiSLFdiSd 504 (603)
T COG4880 425 APGERIYAVRFVGDVLYIVTFRQTDPLFVIDLSNPENPKVLGELKIPGFSEYLHPIGENRLLGVGAYQGGVKISLFDISD 504 (603)
T ss_pred CCCceEEEEEEeCceEEEEEEeccCceEEEEcCCCCCCceeEEEecCCchhhccccCCCcEEEeecccCCceEEEEeccC
Confidence 3447788888877767777777777788888877543322211111111223455 5566666776665 66777766
Q ss_pred CCCC
Q psy14458 122 TMRP 125 (125)
Q Consensus 122 ~~~~ 125 (125)
...|
T Consensus 505 l~~P 508 (603)
T COG4880 505 LAAP 508 (603)
T ss_pred CCCc
Confidence 5443
No 443
>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.
Probab=79.63 E-value=3.2 Score=16.54 Aligned_cols=25 Identities=4% Similarity=0.149 Sum_probs=18.8
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEE
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLY 75 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~ 75 (125)
+.|.+++..+ .+++.+...+.+++|
T Consensus 2 E~i~aia~g~--~~vavaTS~~~lRif 26 (27)
T PF12341_consen 2 EEIEAIAAGD--SWVAVATSAGYLRIF 26 (27)
T ss_pred ceEEEEEccC--CEEEEEeCCCeEEec
Confidence 4567777754 578888888899887
No 444
>KOG4460|consensus
Probab=78.75 E-value=22 Score=25.59 Aligned_cols=37 Identities=16% Similarity=0.203 Sum_probs=28.5
Q ss_pred CCCCeEEEEECCCC---CEEEEEeCCCcEEEEEcCCCcee
Q psy14458 47 QGSPVSALCVDPSG---RLMVSGHEDSSCVLYDIRGSRPL 83 (125)
Q Consensus 47 ~~~~i~~~~~~~~~---~~~~~~~~~~~i~~~d~~~~~~~ 83 (125)
..-.+.-.+|+|+. ..++.-+.|+.+++||......+
T Consensus 164 ~~ltl~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~tel 203 (741)
T KOG4460|consen 164 TSLTLKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEPTEL 203 (741)
T ss_pred CceeeeeccccCCccCCceEEEEecCcEEEEEecCCcchh
Confidence 34567788899974 67888889999999998765444
No 445
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=78.69 E-value=14 Score=23.38 Aligned_cols=63 Identities=17% Similarity=0.258 Sum_probs=41.4
Q ss_pred CeEEEEECCCCCEEEEEe---CCCcEEEEEcCC---C------ceeEEeCCCCCceeEEEEccCCCeEEEeecCC
Q psy14458 50 PVSALCVDPSGRLMVSGH---EDSSCVLYDIRG---S------RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDN 112 (125)
Q Consensus 50 ~i~~~~~~~~~~~~~~~~---~~~~i~~~d~~~---~------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~ 112 (125)
.|..+.+||+|..++... .++.|.+=-+.. + ............+..+.|.+++.+++.+...+
T Consensus 113 ~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~~~~~~ 187 (253)
T PF10647_consen 113 RITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVLGRSAG 187 (253)
T ss_pred ceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEEEeCCCC
Confidence 899999999998776654 356677665432 2 11111212345788999999998887766533
No 446
>PHA03098 kelch-like protein; Provisional
Probab=78.69 E-value=20 Score=25.23 Aligned_cols=63 Identities=11% Similarity=0.057 Sum_probs=31.8
Q ss_pred CCCEEEEEeCC-----CcEEEEEcCCCceeEEeC-CCCCceeEEEEccCCCeEEEeecC------CeEEEEeCCCC
Q psy14458 59 SGRLMVSGHED-----SSCVLYDIRGSRPLQTFK-PHTADVRSIRFSPSAYYLLTGGYD------NKLVLTDLQGT 122 (125)
Q Consensus 59 ~~~~~~~~~~~-----~~i~~~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~d------~~i~~~~~~~~ 122 (125)
++..++.|+.+ ..+..||..+.+....-. .+...-.++. .-++++++.|+.+ ..+..||..+.
T Consensus 342 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~~~~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~ 416 (534)
T PHA03098 342 NNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYNPCVV-NVNNLIYVIGGISKNDELLKTVECFSLNTN 416 (534)
T ss_pred CCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCccceEE-EECCEEEEECCcCCCCcccceEEEEeCCCC
Confidence 45566666644 346778877654322111 0111111121 2267777777732 35778887654
No 447
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=78.66 E-value=16 Score=24.11 Aligned_cols=67 Identities=13% Similarity=0.184 Sum_probs=40.0
Q ss_pred CCeEEEEECC-------CCCEEEEEeCCCcEEEEEcCCCceeE---E-eCCCCCceeEEEEccCCCeEEEeecCCeEE
Q psy14458 49 SPVSALCVDP-------SGRLMVSGHEDSSCVLYDIRGSRPLQ---T-FKPHTADVRSIRFSPSAYYLLTGGYDNKLV 115 (125)
Q Consensus 49 ~~i~~~~~~~-------~~~~~~~~~~~~~i~~~d~~~~~~~~---~-~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~ 115 (125)
..+..+.+.+ .+.+++..-..+.|....+.....+. . +......+..+.+.|||.++++-..+|.|+
T Consensus 253 ~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~Lyv~~d~~G~iy 330 (331)
T PF07995_consen 253 SAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGALYVSDDSDGKIY 330 (331)
T ss_dssp --EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSEEEEEE-TTTTEE
T ss_pred cccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCeEEEEECCCCeEe
Confidence 4555666653 23455555556678777776443222 1 223444788999999999999888888764
No 448
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=78.03 E-value=17 Score=23.91 Aligned_cols=63 Identities=13% Similarity=0.257 Sum_probs=35.5
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC-Cce----eEEeCCCCCceeEEEEccCCCeEEEeecC
Q psy14458 48 GSPVSALCVDPSGRLMVSGHEDSSCVLYDIRG-SRP----LQTFKPHTADVRSIRFSPSAYYLLTGGYD 111 (125)
Q Consensus 48 ~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~-~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~d 111 (125)
...|..|.|.|++.+.+.+ ..|.|+.=+... .+. +.......-.+..++|.++++..++|+..
T Consensus 186 ~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G 253 (302)
T PF14870_consen 186 SRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGGSG 253 (302)
T ss_dssp SS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEESSSS-EEEEESTT
T ss_pred cceehhceecCCCCEEEEe-CCcEEEEccCCCCccccccccCCcccCceeeEEEEecCCCCEEEEeCCc
Confidence 3789999999998876655 788888766221 111 11111122237889999887777766543
No 449
>KOG3611|consensus
Probab=77.77 E-value=22 Score=26.53 Aligned_cols=68 Identities=15% Similarity=0.266 Sum_probs=44.7
Q ss_pred CCeEEEEEC----CC--CCEEEEEeCCCcEE-EEEcCCCc-----eeEEeC--CCCCceeEEEEccCCCeEEEeecCCeE
Q psy14458 49 SPVSALCVD----PS--GRLMVSGHEDSSCV-LYDIRGSR-----PLQTFK--PHTADVRSIRFSPSAYYLLTGGYDNKL 114 (125)
Q Consensus 49 ~~i~~~~~~----~~--~~~~~~~~~~~~i~-~~d~~~~~-----~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~d~~i 114 (125)
...+.|+.+ ++ ...++.|+++|+|. +....... .+.++. .+..+|..|.+++....|..|+.++.+
T Consensus 408 ~~~t~I~Vd~~~~~~~~ydVlflGTd~G~vlKvV~~~~~~~~~~~llEElqvf~~~~pI~~m~Ls~~~~~LyVgs~~gV~ 487 (737)
T KOG3611|consen 408 YRLTQIVVDRVAGLDGNYDVLFLGTDAGTVLKVVSPGKESGKSNVLLEELQVFPDAEPIRSMQLSSKRGSLYVGSRSGVV 487 (737)
T ss_pred ceEEEEEEEEecCCCCcEEEEEEecCCCeEEEEEecCCccCccceeEEEEeecCCCCceeEEEecccCCeEEEEccCcEE
Confidence 455555555 33 35678899999864 55444311 233333 245789999999988889999888876
Q ss_pred EE
Q psy14458 115 VL 116 (125)
Q Consensus 115 ~~ 116 (125)
++
T Consensus 488 qv 489 (737)
T KOG3611|consen 488 QV 489 (737)
T ss_pred Ee
Confidence 54
No 450
>PHA02790 Kelch-like protein; Provisional
Probab=75.72 E-value=25 Score=24.65 Aligned_cols=64 Identities=11% Similarity=-0.030 Sum_probs=32.2
Q ss_pred CCCEEEEEeCC--CcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCC---eEEEEeCCCC
Q psy14458 59 SGRLMVSGHED--SSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDN---KLVLTDLQGT 122 (125)
Q Consensus 59 ~~~~~~~~~~~--~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~---~i~~~~~~~~ 122 (125)
++...+.|+.+ ..+..||..+.+....-.............-++++.+.|+.++ .+..||.++.
T Consensus 318 ~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~ 386 (480)
T PHA02790 318 NNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKPRCNPAVASINNVIYVIGGHSETDTTTEYLLPNHD 386 (480)
T ss_pred CCEEEEECCcCCCCceEEEECCCCeEEECCCCCCCCcccEEEEECCEEEEecCcCCCCccEEEEeCCCC
Confidence 45555666643 4578888766543221111111111111222778888877543 3666776543
No 451
>KOG2109|consensus
Probab=75.68 E-value=6.8 Score=28.56 Aligned_cols=73 Identities=26% Similarity=0.338 Sum_probs=45.9
Q ss_pred cccccCCCCCeEEEEECCCCCEEEEEeCCCc-EEEEEcCCCc-----eeEEeCCC----C-CceeEEEEccCCCeEEEee
Q psy14458 41 TEAGTRQGSPVSALCVDPSGRLMVSGHEDSS-CVLYDIRGSR-----PLQTFKPH----T-ADVRSIRFSPSAYYLLTGG 109 (125)
Q Consensus 41 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-i~~~d~~~~~-----~~~~~~~~----~-~~v~~~~~~~~~~~~~~~~ 109 (125)
+.+...|..++..++|.+.+..+++++-.|. |.++.+.... .-.....+ . ..+..++|+....++..++
T Consensus 308 i~QfkAhkspiSaLcfdqsgsllViasi~g~nVnvfRimet~~t~~~~~qs~~~s~ra~t~aviqdicfs~~s~~r~~gs 387 (788)
T KOG2109|consen 308 IRQFKAHKSPISALCFDQSGSLLVIASITGRNVNVFRIMETVCTVNVSDQSLVVSPRANTAAVIQDICFSEVSTIRTAGS 387 (788)
T ss_pred hhheeeecCcccccccccCceEEEEEeeccceeeeEEeccccccccccccccccchhcchHHHHHHHhhhhhcceEeecc
Confidence 3444567799999999999999999887765 5555443211 11111111 1 2344578888888888887
Q ss_pred cCCe
Q psy14458 110 YDNK 113 (125)
Q Consensus 110 ~d~~ 113 (125)
.+|.
T Consensus 388 c~Ge 391 (788)
T KOG2109|consen 388 CEGE 391 (788)
T ss_pred cCCC
Confidence 6654
No 452
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=75.55 E-value=20 Score=23.57 Aligned_cols=74 Identities=18% Similarity=0.295 Sum_probs=49.0
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeC---CC-------CCceeEEEEccCC-CeEEEeecCCeEEE
Q psy14458 48 GSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFK---PH-------TADVRSIRFSPSA-YYLLTGGYDNKLVL 116 (125)
Q Consensus 48 ~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~---~~-------~~~v~~~~~~~~~-~~~~~~~~d~~i~~ 116 (125)
+.....++|+|....+..+-+...+.|+.+.......... .+ -..|+.+.|++.. .+++-+-+++.+..
T Consensus 180 N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~~~~~~~~LLVLS~ESr~l~E 259 (316)
T COG3204 180 NKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLEFNAITNSLLVLSDESRRLLE 259 (316)
T ss_pred CcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeeccccceecCCCCcEEEEecCCceEEE
Confidence 4678899999999999999899999988876433111111 11 1346778898854 44455555666666
Q ss_pred EeCCC
Q psy14458 117 TDLQG 121 (125)
Q Consensus 117 ~~~~~ 121 (125)
.|+..
T Consensus 260 vd~~G 264 (316)
T COG3204 260 VDLSG 264 (316)
T ss_pred EecCC
Confidence 66554
No 453
>PHA02790 Kelch-like protein; Provisional
Probab=75.55 E-value=25 Score=24.63 Aligned_cols=59 Identities=15% Similarity=0.143 Sum_probs=33.0
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeE--EeCCCCCceeEEEEccCCCeEEEeecC-----CeEEEEeCCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGSRPLQ--TFKPHTADVRSIRFSPSAYYLLTGGYD-----NKLVLTDLQGT 122 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~d-----~~i~~~~~~~~ 122 (125)
++...+.| |.+.+||..+.+... .+.........+.+ ++++.+.|+.+ ..+..||..+.
T Consensus 407 ~~~IYv~G---G~~e~ydp~~~~W~~~~~m~~~r~~~~~~v~--~~~IYviGG~~~~~~~~~ve~Yd~~~~ 472 (480)
T PHA02790 407 GRRLFLVG---RNAEFYCESSNTWTLIDDPIYPRDNPELIIV--DNKLLLIGGFYRGSYIDTIEVYNNRTY 472 (480)
T ss_pred CCEEEEEC---CceEEecCCCCcEeEcCCCCCCccccEEEEE--CCEEEEECCcCCCcccceEEEEECCCC
Confidence 44555555 356788887765432 22211122222222 77888888754 45778887765
No 454
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=75.31 E-value=13 Score=26.51 Aligned_cols=56 Identities=13% Similarity=0.245 Sum_probs=36.6
Q ss_pred CeeecCCCeEEEEECCCCccee-eecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQ-TFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIR 78 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~ 78 (125)
++.+++.|-|++||.- +.... .+.+-. ..|-.+....+|..++..| ...+.+-|++
T Consensus 576 Ia~as~kGDirLyDRi-g~rAKtalP~lG--------------------~aIk~idvta~Gk~ilaTC-k~yllL~d~~ 632 (776)
T COG5167 576 IAAASRKGDIRLYDRI-GKRAKTALPGLG--------------------DAIKHIDVTANGKHILATC-KNYLLLTDVP 632 (776)
T ss_pred EEEecCCCceeeehhh-cchhhhcCcccc--------------------cceeeeEeecCCcEEEEee-cceEEEEecc
Confidence 4678888889999843 43332 233333 6777888888888776665 4456666654
No 455
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=74.99 E-value=24 Score=26.98 Aligned_cols=53 Identities=13% Similarity=0.179 Sum_probs=36.3
Q ss_pred CCcEEEEEcCCCceeEE-eCCCCCceeEEEEccCCCeEEE-eecCC-----eEEEEeCCCC
Q psy14458 69 DSSCVLYDIRGSRPLQT-FKPHTADVRSIRFSPSAYYLLT-GGYDN-----KLVLTDLQGT 122 (125)
Q Consensus 69 ~~~i~~~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~-~~~d~-----~i~~~~~~~~ 122 (125)
.+.|.+-|......... ++ +...+.+-.|+|||+.++- .+.++ .|++-|+++.
T Consensus 328 ~~~L~~~D~dG~n~~~ve~~-~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~ 387 (912)
T TIGR02171 328 TGNLAYIDYTKGASRAVEIE-DTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNAS 387 (912)
T ss_pred CCeEEEEecCCCCceEEEec-CCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhcc
Confidence 35777777655443332 44 6778888999999999987 44444 4888888754
No 456
>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2. Unpublished observations.
Probab=74.73 E-value=21 Score=23.32 Aligned_cols=58 Identities=17% Similarity=0.192 Sum_probs=38.2
Q ss_pred CEEEEEeCCCcEEEEEcCCC-ceeEEeCCCCCceeEEEEccCCCeEEEee-cCCeEEEEeCC
Q psy14458 61 RLMVSGHEDSSCVLYDIRGS-RPLQTFKPHTADVRSIRFSPSAYYLLTGG-YDNKLVLTDLQ 120 (125)
Q Consensus 61 ~~~~~~~~~~~i~~~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~d~~i~~~~~~ 120 (125)
.+++.|+++|. ++.+.... .....+ .+...|.++...+.-+.+++-+ ....++.+++.
T Consensus 14 ~~lL~GTe~Gl-y~~~~~~~~~~~~kl-~~~~~v~q~~v~~~~~lLi~Lsgk~~~L~~~~L~ 73 (302)
T smart00036 14 KWLLVGTEEGL-YVLNISDQPGTLEKL-IGRRSVTQIWVLEENNVLLMISGKKPQLYSHPLS 73 (302)
T ss_pred cEEEEEeCCce-EEEEcccCCCCeEEe-cCcCceEEEEEEhhhCEEEEEeCCcceEEEEEHH
Confidence 57899988885 44555432 222222 2567899999988777666654 34559999874
No 457
>KOG2727|consensus
Probab=72.97 E-value=2.8 Score=31.60 Aligned_cols=71 Identities=20% Similarity=0.232 Sum_probs=47.5
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEc----------c--CC--Ce-EEEeecCCeEEE
Q psy14458 52 SALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFS----------P--SA--YY-LLTGGYDNKLVL 116 (125)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~----------~--~~--~~-~~~~~~d~~i~~ 116 (125)
..++.+|++.+.+..+.-|.|-+.|+.....+..+++.+..- +.|- | +. .+ .+-+-..|.+-+
T Consensus 325 e~lslSP~gtlAAVTD~lgRVlLlDta~~ivvr~wKGYRDAs--c~fv~vkek~~~s~~~~sRvAlFLvIyAPRrgiLEV 402 (1244)
T KOG2727|consen 325 EKLSLSPSGTLAAVTDSLGRVLLLDTAALIVVRLWKGYRDAS--CVFVEVKEKKGKSEPVKSRVALFLVIYAPRRGILEV 402 (1244)
T ss_pred ceeeeCCCccEEEEecccCcEEEEehhhhhHHHHhcccccce--eEEEEcccccCCCccCcCceeEEEEEecccccHHHH
Confidence 367889999999999999999999998776666666554421 1121 1 11 12 233556777888
Q ss_pred EeCCCCCC
Q psy14458 117 TDLQGTMR 124 (125)
Q Consensus 117 ~~~~~~~~ 124 (125)
|.++++.+
T Consensus 403 W~~q~gpR 410 (1244)
T KOG2727|consen 403 WQMQTGPR 410 (1244)
T ss_pred HHhccCCe
Confidence 88887753
No 458
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=72.89 E-value=37 Score=25.37 Aligned_cols=71 Identities=7% Similarity=0.178 Sum_probs=48.2
Q ss_pred CCeEEEEECC--CCCEEEEEeCCCcEEEEEcCC-------C-------------ceeEEeCCCCCceeEEEEc--cCCCe
Q psy14458 49 SPVSALCVDP--SGRLMVSGHEDSSCVLYDIRG-------S-------------RPLQTFKPHTADVRSIRFS--PSAYY 104 (125)
Q Consensus 49 ~~i~~~~~~~--~~~~~~~~~~~~~i~~~d~~~-------~-------------~~~~~~~~~~~~v~~~~~~--~~~~~ 104 (125)
..|+-|.... ..+.|+.+.+||.|.+|.+.. . ++...+. ....++.++++ ...++
T Consensus 101 HtIN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rl 179 (717)
T PF08728_consen 101 HTINFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRL 179 (717)
T ss_pred ceeeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceE
Confidence 4566665554 346789999999999997632 0 0122222 33467888888 67788
Q ss_pred EEEeecCCeEEEEeCC
Q psy14458 105 LLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 105 ~~~~~~d~~i~~~~~~ 120 (125)
||+++....|.||-..
T Consensus 180 IAVSsNs~~VTVFaf~ 195 (717)
T PF08728_consen 180 IAVSSNSQEVTVFAFA 195 (717)
T ss_pred EEEecCCceEEEEEEe
Confidence 8888888888888653
No 459
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=72.25 E-value=22 Score=22.60 Aligned_cols=73 Identities=14% Similarity=0.256 Sum_probs=43.3
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC------ceeEEeC-----CCCCceeEEEEccCCCeEEEeecCCeEEEE
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS------RPLQTFK-----PHTADVRSIRFSPSAYYLLTGGYDNKLVLT 117 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~------~~~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~ 117 (125)
.-...+++..++.++++--.++.+.++++... .....+. .++..+-.++|+|.++.++.+-+..-..++
T Consensus 65 ~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~ 144 (248)
T PF06977_consen 65 GDYEGITYLGNGRYVLSEERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLY 144 (248)
T ss_dssp SSEEEEEE-STTEEEEEETTTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEE
T ss_pred CCceeEEEECCCEEEEEEcCCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhE
Confidence 45677788777766666656888998888331 1111121 244567889999977767677776666666
Q ss_pred eCCC
Q psy14458 118 DLQG 121 (125)
Q Consensus 118 ~~~~ 121 (125)
.++.
T Consensus 145 ~~~~ 148 (248)
T PF06977_consen 145 EVNG 148 (248)
T ss_dssp EEES
T ss_pred EEcc
Confidence 6543
No 460
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=70.50 E-value=13 Score=19.35 Aligned_cols=29 Identities=17% Similarity=0.298 Sum_probs=22.7
Q ss_pred eeEEEEccCCCeEEEee-cCCeEEEEeCCC
Q psy14458 93 VRSIRFSPSAYYLLTGG-YDNKLVLTDLQG 121 (125)
Q Consensus 93 v~~~~~~~~~~~~~~~~-~d~~i~~~~~~~ 121 (125)
-+.|.++|+++++..++ .++.|+++..+.
T Consensus 56 aNGI~~s~~~k~lyVa~~~~~~I~vy~~~~ 85 (86)
T PF01731_consen 56 ANGIAISPDKKYLYVASSLAHSIHVYKRHK 85 (86)
T ss_pred CceEEEcCCCCEEEEEeccCCeEEEEEecC
Confidence 45789999988776665 578899998764
No 461
>TIGR02608 delta_60_rpt delta-60 repeat domain. This domain occurs in tandem repeats, as many as 13, in proteins from Bdellovibrio bacteriovorus, Azotobacter vinelandii, Geobacter sulfurreducens, Pirellula sp. 1, Myxococcus xanthus, and others, many of which are Deltaproteobacteria. The periodicity of the repeat ranges from about 57 to 61 amino acids, and a core region of about 54 is represented by this model and seed alignment.
Probab=70.48 E-value=10 Score=17.96 Aligned_cols=17 Identities=12% Similarity=0.194 Sum_probs=12.8
Q ss_pred eeEEEEccCCCeEEEee
Q psy14458 93 VRSIRFSPSAYYLLTGG 109 (125)
Q Consensus 93 v~~~~~~~~~~~~~~~~ 109 (125)
+..+...|||++++.|.
T Consensus 3 ~~~~~~q~DGkIlv~G~ 19 (55)
T TIGR02608 3 AYAVAVQSDGKILVAGY 19 (55)
T ss_pred eEEEEECCCCcEEEEEE
Confidence 45677778888888875
No 462
>KOG2247|consensus
Probab=70.40 E-value=0.19 Score=34.62 Aligned_cols=72 Identities=14% Similarity=0.241 Sum_probs=46.0
Q ss_pred CCeEEEEECCCCCEE-EEEeCCCcEEEEEcCCCc--eeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLM-VSGHEDSSCVLYDIRGSR--PLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~-~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
...-.++|+.++..+ +.+-..+.+++||+.+.. .+..-..|... -..|++....++.+...+.+.+++.++.
T Consensus 75 g~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE~gg~~s~s--ll~wsKg~~el~ig~~~gn~viynhgts 149 (615)
T KOG2247|consen 75 GKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLESGGTSSKS--LLAWSKGTPELVIGNNAGNIVIYNHGTS 149 (615)
T ss_pred hhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHhccCcchHH--HHhhccCCccccccccccceEEEeccch
Confidence 345577788777554 556678899999987532 11111112222 2567777777777778888888887654
No 463
>KOG3616|consensus
Probab=70.23 E-value=22 Score=26.93 Aligned_cols=32 Identities=25% Similarity=0.445 Sum_probs=27.4
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
..++++.-+|.+.-++.+..||.|.+|+....
T Consensus 15 e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r 46 (1636)
T KOG3616|consen 15 EFTTAIQSHPGGQSFVLAHQDGSIILFNFIPR 46 (1636)
T ss_pred ceeeeeeecCCCceEEEEecCCcEEEEeeccc
Confidence 46778888899999999999999999987543
No 464
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=70.12 E-value=26 Score=22.50 Aligned_cols=28 Identities=18% Similarity=0.236 Sum_probs=18.9
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHT 28 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~ 28 (125)
|+.|.+++.|.|.|......+..+.-..
T Consensus 198 LViGTE~~~i~iLd~~af~il~~~~lps 225 (257)
T PF14779_consen 198 LVIGTESGEIYILDPQAFTILKQVQLPS 225 (257)
T ss_pred EEEEecCCeEEEECchhheeEEEEecCC
Confidence 4567888888888877665555555443
No 465
>KOG1897|consensus
Probab=69.33 E-value=52 Score=25.64 Aligned_cols=52 Identities=13% Similarity=0.142 Sum_probs=39.4
Q ss_pred eCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEe
Q psy14458 67 HEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTD 118 (125)
Q Consensus 67 ~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~ 118 (125)
+-+..|++|++.+.+.+..-..+...+..+...-.|..++.|-.=+.+.+..
T Consensus 845 ~In~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~ 896 (1096)
T KOG1897|consen 845 GINQSVRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQ 896 (1096)
T ss_pred ecCcEEEEEEccccceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEE
Confidence 3567899999988876666566777888888888888898887666665543
No 466
>PRK13684 Ycf48-like protein; Provisional
Probab=68.38 E-value=32 Score=22.83 Aligned_cols=64 Identities=13% Similarity=0.278 Sum_probs=37.1
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEE-EEcCCCceeEE-eCCCCCceeEEEEccCCCeEEEeecCCeEE
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVL-YDIRGSRPLQT-FKPHTADVRSIRFSPSAYYLLTGGYDNKLV 115 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~-~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~ 115 (125)
..+..+.+.|++.+++.+ ..|.+.. ++ ..++.-.. .......+..+.+.|+++.++.+ ..|.+.
T Consensus 173 g~~~~i~~~~~g~~v~~g-~~G~i~~s~~-~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~ 238 (334)
T PRK13684 173 GVVRNLRRSPDGKYVAVS-SRGNFYSTWE-PGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLA-RGGQIR 238 (334)
T ss_pred ceEEEEEECCCCeEEEEe-CCceEEEEcC-CCCCeEEEeeCCCcccceeeeEcCCCCEEEEe-cCCEEE
Confidence 457888888887766555 4554442 22 11221222 22334567888898988876665 445554
No 467
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=68.36 E-value=26 Score=21.83 Aligned_cols=42 Identities=21% Similarity=0.297 Sum_probs=27.8
Q ss_pred cCCCeEEEEECCCC--cceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEe
Q psy14458 5 HEDSSCVLYDIRGS--RPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGH 67 (125)
Q Consensus 5 ~~d~~i~v~d~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 67 (125)
...++|.+|++... +....|.. - +.+..+..+..|+++++--
T Consensus 35 ~~g~~Vev~~l~~~~~~~~~~F~T-v--------------------~~V~~l~y~~~GDYlvTlE 78 (215)
T PF14761_consen 35 ASGCKVEVYDLEQEECPLLCTFST-V--------------------GRVLQLVYSEAGDYLVTLE 78 (215)
T ss_pred cCCCEEEEEEcccCCCceeEEEcc-h--------------------hheeEEEeccccceEEEEE
Confidence 45567888888732 33444442 1 5777888888888888853
No 468
>PF08309 LVIVD: LVIVD repeat; InterPro: IPR013211 This repeat is found in bacterial and archaeal cell surface proteins, many of which are hypothetical. The secondary structure corresponding to this repeat is predicted to comprise 4 beta-strands, which may associate to form a beta-propeller. The repeat copy number varies from 2-14. This repeat is sometimes found with the PKD domain IPR000601 from INTERPRO.
Probab=67.32 E-value=10 Score=16.77 Aligned_cols=30 Identities=27% Similarity=0.469 Sum_probs=21.4
Q ss_pred eEEEEccCCCeEEEeecCCeEEEEeCCCCCCC
Q psy14458 94 RSIRFSPSAYYLLTGGYDNKLVLTDLQGTMRP 125 (125)
Q Consensus 94 ~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~ 125 (125)
..+.. .|.+...+..++-+.+.|+.+...|
T Consensus 5 ~~v~v--~g~yaYva~~~~Gl~IvDISnPs~P 34 (42)
T PF08309_consen 5 RDVAV--SGNYAYVADGNNGLVIVDISNPSNP 34 (42)
T ss_pred EEEEE--ECCEEEEEeCCCCEEEEECCCCCCC
Confidence 34444 5567777766677999999887766
No 469
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=67.10 E-value=35 Score=22.88 Aligned_cols=69 Identities=17% Similarity=0.228 Sum_probs=39.5
Q ss_pred CCeEEEEECCCCCEEEEEe-----------CCC-cEEEEEcCC--Cc--eeEEeCCCCCceeEEEEccCCCeEEEeecCC
Q psy14458 49 SPVSALCVDPSGRLMVSGH-----------EDS-SCVLYDIRG--SR--PLQTFKPHTADVRSIRFSPSAYYLLTGGYDN 112 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~-----------~~~-~i~~~d~~~--~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~ 112 (125)
.....|+|.++++++++-. ..+ .|.+++-.+ ++ ....+-..-...+.+.+.+++ ++++ ....
T Consensus 14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV~-~~~~ 91 (367)
T TIGR02604 14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYVA-TPPD 91 (367)
T ss_pred CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEEe-CCCe
Confidence 4567889999999877753 223 677776543 22 223333223345778888888 4443 3444
Q ss_pred eEEEEeC
Q psy14458 113 KLVLTDL 119 (125)
Q Consensus 113 ~i~~~~~ 119 (125)
..++.|.
T Consensus 92 i~~~~d~ 98 (367)
T TIGR02604 92 ILFLRDK 98 (367)
T ss_pred EEEEeCC
Confidence 3334344
No 470
>KOG2280|consensus
Probab=66.81 E-value=53 Score=24.76 Aligned_cols=29 Identities=10% Similarity=0.286 Sum_probs=22.1
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEEcCC
Q psy14458 50 PVSALCVDPSGRLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 50 ~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 79 (125)
.+-.+-|+.+.. ++....+|++++|++..
T Consensus 85 ~lI~mgWs~~ee-LI~v~k~g~v~Vy~~~g 113 (829)
T KOG2280|consen 85 ELIGMGWSDDEE-LICVQKDGTVHVYGLLG 113 (829)
T ss_pred CeeeecccCCce-EEEEeccceEEEeecch
Confidence 667888886554 56666999999999753
No 471
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=66.74 E-value=31 Score=22.15 Aligned_cols=68 Identities=15% Similarity=0.210 Sum_probs=41.2
Q ss_pred CCeEEEEECC------CC-CEEEEEeCCCcEEEEEcCCCceeEEeCCCCCce---eEEEEc-cCCCeEEEeecCCeEEEE
Q psy14458 49 SPVSALCVDP------SG-RLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADV---RSIRFS-PSAYYLLTGGYDNKLVLT 117 (125)
Q Consensus 49 ~~i~~~~~~~------~~-~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v---~~~~~~-~~~~~~~~~~~d~~i~~~ 117 (125)
..|+||+--. +. ..++.|.++|.|++.|...-..+..+.--.-++ ..-.|. -| ..|+.++.||.|++.
T Consensus 177 t~ITcm~tikk~~~d~~a~scLViGTE~~~i~iLd~~af~il~~~~lpsvPv~i~~~G~~devd-yRI~Va~Rdg~iy~i 255 (257)
T PF14779_consen 177 TVITCMATIKKSSADEDAVSCLVIGTESGEIYILDPQAFTILKQVQLPSVPVFISVSGQYDEVD-YRIVVACRDGKIYTI 255 (257)
T ss_pred ceeEEeeeecccccCCCCcceEEEEecCCeEEEECchhheeEEEEecCCCceEEEEEeeeeccc-eEEEEEeCCCEEEEE
Confidence 4566665332 12 578999999999999987766555555222222 122342 23 345666788888764
No 472
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=66.29 E-value=30 Score=21.77 Aligned_cols=49 Identities=14% Similarity=0.154 Sum_probs=27.6
Q ss_pred CCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeC
Q psy14458 68 EDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDL 119 (125)
Q Consensus 68 ~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~ 119 (125)
.+|....+|..+-+.+..+. ..+.=+.++. |+..++.+.+..+++.-|.
T Consensus 109 ~egvaf~~d~~t~~~lg~~~-y~GeGWgLt~--d~~~LimsdGsatL~frdP 157 (262)
T COG3823 109 KEGVAFKYDADTLEELGRFS-YEGEGWGLTS--DDKNLIMSDGSATLQFRDP 157 (262)
T ss_pred ccceeEEEChHHhhhhcccc-cCCcceeeec--CCcceEeeCCceEEEecCH
Confidence 56666777777666665555 3333334433 5555666655556655554
No 473
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=64.93 E-value=33 Score=21.74 Aligned_cols=70 Identities=9% Similarity=0.100 Sum_probs=43.8
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEE-cCCCce-eEEeC--CCCCceeEEEEccCCCeEEEee---cCCeEEEEe
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYD-IRGSRP-LQTFK--PHTADVRSIRFSPSAYYLLTGG---YDNKLVLTD 118 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d-~~~~~~-~~~~~--~~~~~v~~~~~~~~~~~~~~~~---~d~~i~~~~ 118 (125)
..+..-.|++++...+....+...+++. ...++. ..... .-...|..+.++|||.-++... .++.+.+--
T Consensus 66 ~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~ 142 (253)
T PF10647_consen 66 GSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAG 142 (253)
T ss_pred CccccccccCCCCEEEEEcCCCceEEEEecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEE
Confidence 4667778889987777776666666663 233321 11122 1222899999999998776655 346666654
No 474
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=64.55 E-value=36 Score=22.10 Aligned_cols=60 Identities=18% Similarity=0.362 Sum_probs=40.2
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC-----ceeEEeCCC-CCceeEEEEcc--CCCeEEEe
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS-----RPLQTFKPH-TADVRSIRFSP--SAYYLLTG 108 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~-----~~~~~~~~~-~~~v~~~~~~~--~~~~~~~~ 108 (125)
.....++++++|.++++--+.+.|..|+..+. ..+...... -..+..+.+.+ +|.+.+..
T Consensus 186 ~~s~g~~~D~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~l~~d~~~l~~pd~~~i~~~~~g~L~v~s 253 (287)
T PF03022_consen 186 SQSDGMAIDPNGNLYFTDVEQNAIGCWDPDGPYTPENFEILAQDPRTLQWPDGLKIDPEGDGYLWVLS 253 (287)
T ss_dssp -SECEEEEETTTEEEEEECCCTEEEEEETTTSB-GCCEEEEEE-CC-GSSEEEEEE-T--TS-EEEEE
T ss_pred CCCceEEECCCCcEEEecCCCCeEEEEeCCCCcCccchheeEEcCceeeccceeeeccccCceEEEEE
Confidence 46678899999999999999999999998762 112212222 34677888888 77666554
No 475
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=64.03 E-value=38 Score=22.09 Aligned_cols=69 Identities=19% Similarity=0.306 Sum_probs=40.0
Q ss_pred CCeEEEEECCCCCEEEEEe------CCCcEEEEEcCCCceeEEeCC-----CCCceeEEEEcc-CC-CeEEEee-cCC--
Q psy14458 49 SPVSALCVDPSGRLMVSGH------EDSSCVLYDIRGSRPLQTFKP-----HTADVRSIRFSP-SA-YYLLTGG-YDN-- 112 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~------~~~~i~~~d~~~~~~~~~~~~-----~~~~v~~~~~~~-~~-~~~~~~~-~d~-- 112 (125)
..|+.+.|..+.++++.|. ....+-.||..+.... .+.. -.++|..+.+.. |+ ++.+.|. .++
T Consensus 37 G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~-~~~~~~s~~ipgpv~a~~~~~~d~~~~~~aG~~~~g~~ 115 (281)
T PF12768_consen 37 GTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWS-SLGGGSSNSIPGPVTALTFISNDGSNFWVAGRSANGST 115 (281)
T ss_pred EEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeee-ecCCcccccCCCcEEEEEeeccCCceEEEeceecCCCc
Confidence 5788888886667777765 3455778887765432 2222 236777777644 33 3444544 233
Q ss_pred eEEEEe
Q psy14458 113 KLVLTD 118 (125)
Q Consensus 113 ~i~~~~ 118 (125)
.+.-||
T Consensus 116 ~l~~~d 121 (281)
T PF12768_consen 116 FLMKYD 121 (281)
T ss_pred eEEEEc
Confidence 355553
No 476
>KOG3522|consensus
Probab=63.93 E-value=50 Score=25.22 Aligned_cols=62 Identities=11% Similarity=0.097 Sum_probs=41.1
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCC---CCCceeEEEEccCCCeEEEeecCCe
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKP---HTADVRSIRFSPSAYYLLTGGYDNK 113 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~d~~ 113 (125)
.++...++.. -++-++.+|.+.++...+......... |-..|+++.+.-++-+++-.++|-.
T Consensus 627 lPvrsla~~e---d~~was~gG~V~vi~~tt~~~~~~leahqee~~~Vthm~~~~~gVwvafasG~~~ 691 (925)
T KOG3522|consen 627 LPVRSLAFQE---DFVWASEGGCVHVIPSTTFIRSWDLEAHQEEAHSVTHMLYLDNGVWVAFASGDEE 691 (925)
T ss_pred ccccchhhhh---ceeeeecCCceEEEechhccccchhHHHHhhcceEEEEEeeCCceEEEEcCCCEE
Confidence 3444444433 356778899999999988655444443 4567889888877766666665543
No 477
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=63.80 E-value=49 Score=23.29 Aligned_cols=53 Identities=13% Similarity=0.174 Sum_probs=36.6
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCc--eeEEeC-----CCCCceeEEEEccC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSR--PLQTFK-----PHTADVRSIRFSPS 101 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~~~~-----~~~~~v~~~~~~~~ 101 (125)
...+.|+|.|++.++++--..|.|++++..++. .+..+. ...+....|+++|+
T Consensus 30 ~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~Pd 89 (454)
T TIGR03606 30 NKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPD 89 (454)
T ss_pred CCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCC
Confidence 456899999999888777557999999765442 222121 12456788999987
No 478
>PF10584 Proteasome_A_N: Proteasome subunit A N-terminal signature; InterPro: IPR000426 The proteasome (or macropain) (3.4.25.1 from EC) [, , , , ] is a eukaryotic and archaeal multicatalytic proteinase complex that seems to be involved in an ATP/ubiquitin-dependent nonlysosomal proteolytic pathway. In eukaryotes the proteasome is composed of about 28 distinct subunits which form a highly ordered ring-shaped structure (20S ring) of about 700 kDa. Most proteasome subunits can be classified, on the basis on sequence similarities into two groups, alpha (A) and beta (B). This family contains the alpha subunit sequences which range from 210 to 290 amino acids. These sequences are classified as non-peptidase homologues in MEROPS peptidase family T1 (clan PB(T)). ; GO: 0004175 endopeptidase activity, 0006511 ubiquitin-dependent protein catabolic process, 0019773 proteasome core complex, alpha-subunit complex; PDB: 3H4P_M 1IRU_O 3UN4_U 1FNT_A 3OEV_G 3OEU_U 3SDK_U 3DY3_G 3MG7_G 3L5Q_C ....
Probab=63.41 E-value=2 Score=16.40 Aligned_cols=8 Identities=38% Similarity=0.658 Sum_probs=5.4
Q ss_pred EEccCCCe
Q psy14458 97 RFSPSAYY 104 (125)
Q Consensus 97 ~~~~~~~~ 104 (125)
.|+|+|++
T Consensus 7 ~FSp~Grl 14 (23)
T PF10584_consen 7 TFSPDGRL 14 (23)
T ss_dssp SBBTTSSB
T ss_pred eECCCCeE
Confidence 36777765
No 479
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=62.78 E-value=42 Score=22.23 Aligned_cols=58 Identities=17% Similarity=0.311 Sum_probs=37.1
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEEcCCCce---eEEeC----CCCCceeEEEEccC----CCeEEEee
Q psy14458 50 PVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRP---LQTFK----PHTADVRSIRFSPS----AYYLLTGG 109 (125)
Q Consensus 50 ~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~---~~~~~----~~~~~v~~~~~~~~----~~~~~~~~ 109 (125)
..+.|+|.|++.++++ ...|.|++++ ..+.. +.... ........++++|+ +.+.+..+
T Consensus 3 ~P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t 71 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYT 71 (331)
T ss_dssp SEEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEE
T ss_pred CceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEE
Confidence 4578999999887765 4699999998 44332 33331 23456788999994 55555544
No 480
>PF06739 SBBP: Beta-propeller repeat; InterPro: IPR010620 This family is related to IPR001680 from INTERPRO and is likely to also form a beta-propeller. SBBP stands for Seven Bladed Beta Propeller.
Probab=62.58 E-value=12 Score=16.00 Aligned_cols=22 Identities=23% Similarity=0.448 Sum_probs=18.5
Q ss_pred CCeEEEEECCCCCEEEEEeCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDS 70 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~ 70 (125)
.....|+++++++..++|..++
T Consensus 13 ~~~~~IavD~~GNiYv~G~T~~ 34 (38)
T PF06739_consen 13 DYGNGIAVDSNGNIYVTGYTNG 34 (38)
T ss_pred eeEEEEEECCCCCEEEEEeecC
Confidence 4578999999999999998765
No 481
>KOG1898|consensus
Probab=61.95 E-value=78 Score=25.03 Aligned_cols=71 Identities=14% Similarity=0.174 Sum_probs=42.2
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEEcC-CCceeEEe--CCCCCceeEEEEccCC------CeEEEeecCCeEEEEeCC
Q psy14458 50 PVSALCVDPSGRLMVSGHEDSSCVLYDIR-GSRPLQTF--KPHTADVRSIRFSPSA------YYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 50 ~i~~~~~~~~~~~~~~~~~~~~i~~~d~~-~~~~~~~~--~~~~~~v~~~~~~~~~------~~~~~~~~d~~i~~~~~~ 120 (125)
.+..+.-.-....++.+-.+|.+..+... ++++..-. ..-...|.|+++.++. ++++.++.|+++++..+.
T Consensus 539 ~~~Iv~~avnr~qiVvalSngelvyfe~d~sgql~E~~er~tl~~~vac~ai~~~~~g~krsrfla~a~~d~~vriisL~ 618 (1205)
T KOG1898|consen 539 RVRIVKCAVNRRQIVVALSNGELVYFEGDVSGQLNEFTERVTLSTDVACLAIGQDPEGEKRSRFLALASVDNMVRIISLD 618 (1205)
T ss_pred ceEEEEEeecceEEEEEccCCeEEEEEeccCccceeeeeeeeeceeehhhccCCCCcchhhcceeeeeccccceeEEEec
Confidence 33333333345556666666665545443 33322211 2234567888887753 689999999999998765
No 482
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=61.66 E-value=45 Score=22.24 Aligned_cols=76 Identities=17% Similarity=0.287 Sum_probs=47.5
Q ss_pred CCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECC------CCCEEEEEeCCCcEEEEEcCC
Q psy14458 6 EDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDP------SGRLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 6 ~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~i~~~d~~~ 79 (125)
.-|.|-+||+. ++.++.+. +.... ..-+.|+..| .+.+|+.---||+|..+|..+
T Consensus 220 G~G~VdvFd~~-G~l~~r~a-s~g~L-----------------NaPWG~a~APa~FG~~sg~lLVGNFGDG~InaFD~~s 280 (336)
T TIGR03118 220 GLGYVNVFTLN-GQLLRRVA-SSGRL-----------------NAPWGLAIAPESFGSLSGALLVGNFGDGTINAYDPQS 280 (336)
T ss_pred CcceEEEEcCC-CcEEEEec-cCCcc-----------------cCCceeeeChhhhCCCCCCeEEeecCCceeEEecCCC
Confidence 34677777754 66666554 22211 3445666655 356677767899999999988
Q ss_pred CceeEEeCCCCC------ceeEEEEcc
Q psy14458 80 SRPLQTFKPHTA------DVRSIRFSP 100 (125)
Q Consensus 80 ~~~~~~~~~~~~------~v~~~~~~~ 100 (125)
++.+-.+....+ ..+.+.|-.
T Consensus 281 G~~~g~L~~~~G~pi~i~GLWgL~fGn 307 (336)
T TIGR03118 281 GAQLGQLLDPDNHPVKVDGLWSLTFGN 307 (336)
T ss_pred CceeeeecCCCCCeEEecCeEEeeeCC
Confidence 887766663322 345666643
No 483
>KOG3616|consensus
Probab=61.51 E-value=18 Score=27.26 Aligned_cols=33 Identities=12% Similarity=0.157 Sum_probs=27.5
Q ss_pred CceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 91 ADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 91 ~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
..+.++.-+|.++-++.+..||.|.+++...+.
T Consensus 15 e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~ 47 (1636)
T KOG3616|consen 15 EFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRR 47 (1636)
T ss_pred ceeeeeeecCCCceEEEEecCCcEEEEeecccc
Confidence 446778888999999999999999999976543
No 484
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=61.10 E-value=47 Score=22.23 Aligned_cols=62 Identities=13% Similarity=0.130 Sum_probs=38.0
Q ss_pred CEEEEEeCCCcEEEEEcCCCceeEEeCCCC--CceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 61 RLMVSGHEDSSCVLYDIRGSRPLQTFKPHT--ADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 61 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
..++.+..+|.+...|..+++.+....... ..+..-....+|+ +..++.++.++.+|.+++.
T Consensus 69 g~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~-i~~g~~~g~~y~ld~~~G~ 132 (370)
T COG1520 69 GTVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGK-IYVGSWDGKLYALDASTGT 132 (370)
T ss_pred CeEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCe-EEEecccceEEEEECCCCc
Confidence 345555788888888888887665433221 2222222222665 7777778888888886553
No 485
>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function.
Probab=59.95 E-value=62 Score=23.24 Aligned_cols=20 Identities=25% Similarity=0.404 Sum_probs=15.5
Q ss_pred CCCceeEEEEccCCCeEEEe
Q psy14458 89 HTADVRSIRFSPSAYYLLTG 108 (125)
Q Consensus 89 ~~~~v~~~~~~~~~~~~~~~ 108 (125)
...++..++|+||++.+...
T Consensus 500 ~gaE~tG~~fspDg~tlFvn 519 (524)
T PF05787_consen 500 NGAEITGPCFSPDGRTLFVN 519 (524)
T ss_pred CCcccccceECCCCCEEEEE
Confidence 45678889999998877653
No 486
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=57.57 E-value=21 Score=24.38 Aligned_cols=31 Identities=23% Similarity=0.245 Sum_probs=24.8
Q ss_pred CceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 91 ADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 91 ~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
..+..+...+..+.+++...++.|.+|++..
T Consensus 190 ~~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~ 220 (422)
T PF08801_consen 190 PKIVQVAVDPSRRLLYTLTSDGSIQVWDLGP 220 (422)
T ss_dssp --EEEEEEETTTTEEEEEESSE-EEEEEE-S
T ss_pred hceeeEEecCCcCEEEEEeCCCcEEEEEEeC
Confidence 3488899988889999999999999999974
No 487
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=56.70 E-value=36 Score=19.56 Aligned_cols=66 Identities=11% Similarity=0.193 Sum_probs=41.2
Q ss_pred EECCCCCEEEEEeCCCcEEEEEcCCCc--------eeEEeCCCCCceeEEE---Ecc--CCCeEEEeecCCeEEEEeCCC
Q psy14458 55 CVDPSGRLMVSGHEDSSCVLYDIRGSR--------PLQTFKPHTADVRSIR---FSP--SAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 55 ~~~~~~~~~~~~~~~~~i~~~d~~~~~--------~~~~~~~~~~~v~~~~---~~~--~~~~~~~~~~d~~i~~~~~~~ 121 (125)
.|......|+.++..|.|.|++..... .+..+. -+..|++++ +.| +...|+.|+. ..+..||+..
T Consensus 5 kfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LN-in~~italaaG~l~~~~~~D~LliGt~-t~llaYDV~~ 82 (136)
T PF14781_consen 5 KFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLN-INQEITALAAGRLKPDDGRDCLLIGTQ-TSLLAYDVEN 82 (136)
T ss_pred EeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEE-CCCceEEEEEEecCCCCCcCEEEEecc-ceEEEEEccc
Confidence 455555678888888999999876432 233333 456677764 443 3456666654 4578888765
Q ss_pred C
Q psy14458 122 T 122 (125)
Q Consensus 122 ~ 122 (125)
.
T Consensus 83 N 83 (136)
T PF14781_consen 83 N 83 (136)
T ss_pred C
Confidence 3
No 488
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=55.71 E-value=38 Score=21.56 Aligned_cols=48 Identities=21% Similarity=0.131 Sum_probs=29.6
Q ss_pred EEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeec-C--CeEEEEeCC
Q psy14458 73 VLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGY-D--NKLVLTDLQ 120 (125)
Q Consensus 73 ~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-d--~~i~~~~~~ 120 (125)
.+||+.+++..---...+-.+..-.+-|||+++.+|+. + ..+++++..
T Consensus 49 ~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~ 99 (243)
T PF07250_consen 49 VEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPC 99 (243)
T ss_pred EEEecCCCcEEeccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecC
Confidence 47888776532211123344555677889999999874 3 447777654
No 489
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=53.95 E-value=70 Score=22.03 Aligned_cols=54 Identities=9% Similarity=-0.015 Sum_probs=29.9
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEc--cCCCeEE
Q psy14458 53 ALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFS--PSAYYLL 106 (125)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~ 106 (125)
...++|+.+.++-......|...|+.+.+....+...+..+-...|. .|+..++
T Consensus 85 g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p~~~~g~gt~v~n~d~t~~~ 140 (386)
T PF14583_consen 85 GGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYEVPDDWKGYGTWVANSDCTKLV 140 (386)
T ss_dssp T-EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE--TTEEEEEEEEE-TTSSEEE
T ss_pred ceEEecCCCeEEEEECCCeEEEEECCcCcEEEEEECCcccccccceeeCCCccEEE
Confidence 45667777776555456678889998877655555455555555554 3454443
No 490
>KOG4441|consensus
Probab=53.63 E-value=84 Score=22.84 Aligned_cols=62 Identities=19% Similarity=0.252 Sum_probs=35.7
Q ss_pred CCEEEEEeCC------CcEEEEEcCCCceeEEeC-CCCCceeEEEEccCCCeEEEeecC------CeEEEEeCCCC
Q psy14458 60 GRLMVSGHED------SSCVLYDIRGSRPLQTFK-PHTADVRSIRFSPSAYYLLTGGYD------NKLVLTDLQGT 122 (125)
Q Consensus 60 ~~~~~~~~~~------~~i~~~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~d------~~i~~~~~~~~ 122 (125)
+..++.|+.+ ..+..+|..+++...... .......+++.. ++.++++|+.| ..+..||.++.
T Consensus 285 ~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~ 359 (571)
T KOG4441|consen 285 GKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTN 359 (571)
T ss_pred CeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEE-CCEEEEEccccCCCcccceEEEecCCCC
Confidence 4556666666 357788888774333222 122222233332 66888999988 34666776654
No 491
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=53.21 E-value=64 Score=21.35 Aligned_cols=64 Identities=14% Similarity=0.066 Sum_probs=47.6
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeec
Q psy14458 47 QGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGY 110 (125)
Q Consensus 47 ~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 110 (125)
.+..-..++-.|+|...+++...+.|--.|.++++....--+....-+.|..-|||...++-+.
T Consensus 60 ~G~ap~dvapapdG~VWft~qg~gaiGhLdP~tGev~~ypLg~Ga~Phgiv~gpdg~~Witd~~ 123 (353)
T COG4257 60 NGSAPFDVAPAPDGAVWFTAQGTGAIGHLDPATGEVETYPLGSGASPHGIVVGPDGSAWITDTG 123 (353)
T ss_pred CCCCccccccCCCCceEEecCccccceecCCCCCceEEEecCCCCCCceEEECCCCCeeEecCc
Confidence 3456678888999999999998999999999998866554445555667778888766555443
No 492
>KOG4499|consensus
Probab=52.39 E-value=62 Score=20.90 Aligned_cols=75 Identities=7% Similarity=0.053 Sum_probs=46.5
Q ss_pred CCeEEEEECCCCCEE-EEEeCCCcEEEEE--cCCC-----ceeEEeCCC---CC-ceeEEEEccCCCeEEEeecCCeEEE
Q psy14458 49 SPVSALCVDPSGRLM-VSGHEDSSCVLYD--IRGS-----RPLQTFKPH---TA-DVRSIRFSPSAYYLLTGGYDNKLVL 116 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~-~~~~~~~~i~~~d--~~~~-----~~~~~~~~~---~~-~v~~~~~~~~~~~~~~~~~d~~i~~ 116 (125)
..-+.++|+.+.+.+ ++-+.+-.|..|| ..++ +.+..++.. .. .--.++..-+|.+.++.-..+++.-
T Consensus 158 ~IsNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~ 237 (310)
T KOG4499|consen 158 GISNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQK 237 (310)
T ss_pred cCCccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEE
Confidence 344678888877554 4555666676777 4443 333333321 11 1123455668888888888999999
Q ss_pred EeCCCCC
Q psy14458 117 TDLQGTM 123 (125)
Q Consensus 117 ~~~~~~~ 123 (125)
.|..++.
T Consensus 238 ~dp~tGK 244 (310)
T KOG4499|consen 238 VDPTTGK 244 (310)
T ss_pred ECCCCCc
Confidence 9988764
No 493
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=52.36 E-value=67 Score=21.28 Aligned_cols=76 Identities=18% Similarity=0.146 Sum_probs=51.9
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCce-eEEe-CCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 47 QGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRP-LQTF-KPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 47 ~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~~~-~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
.+..-..|+..|+|+..++.-.++.|-..|...+.. .... ....+.-+.+.-+|.|...++-...+.+.-+|.+..
T Consensus 187 qG~gpyGi~atpdGsvwyaslagnaiaridp~~~~aev~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~ 264 (353)
T COG4257 187 QGGGPYGICATPDGSVWYASLAGNAIARIDPFAGHAEVVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVT 264 (353)
T ss_pred CCCCCcceEECCCCcEEEEeccccceEEcccccCCcceecCCCcccccccccccCccCcEEEeccCCceeeEeCcccc
Confidence 445677888899998888877777777777766521 1111 122344556767888888888888888888876543
No 494
>PF08954 DUF1900: Domain of unknown function (DUF1900); InterPro: IPR015049 This domain is predominantly found in the structural protein coronin, and is duplicated in some sequences. It has no known function []. ; PDB: 2B4E_A 2AQ5_A.
Probab=52.34 E-value=28 Score=19.96 Aligned_cols=31 Identities=13% Similarity=0.155 Sum_probs=15.5
Q ss_pred ceeEEEEccCCCeEEEee-cCCeEEEEeCCCC
Q psy14458 92 DVRSIRFSPSAYYLLTGG-YDNKLVLTDLQGT 122 (125)
Q Consensus 92 ~v~~~~~~~~~~~~~~~~-~d~~i~~~~~~~~ 122 (125)
.+.---|.+|...+..++ +|+.|+.|++...
T Consensus 12 g~L~P~yD~dt~llyl~gKGD~~ir~yEv~~~ 43 (136)
T PF08954_consen 12 GVLMPFYDEDTNLLYLAGKGDGNIRYYEVSDE 43 (136)
T ss_dssp S-EEEEE-TTT-EEEEEETT-S-EEEEEE-SS
T ss_pred ceeEeeEcCCCCEEEEEeccCcEEEEEEEcCC
Confidence 344455677666555444 6788888887554
No 495
>KOG2109|consensus
Probab=51.95 E-value=15 Score=26.94 Aligned_cols=46 Identities=15% Similarity=0.336 Sum_probs=35.0
Q ss_pred EEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCe-EEEE
Q psy14458 72 CVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNK-LVLT 117 (125)
Q Consensus 72 i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~-i~~~ 117 (125)
+-+-|......+..|++|+.++..++|.+.+..+++++..|. |.++
T Consensus 297 vivkdf~S~a~i~QfkAhkspiSaLcfdqsgsllViasi~g~nVnvf 343 (788)
T KOG2109|consen 297 VIVKDFDSFADIRQFKAHKSPISALCFDQSGSLLVIASITGRNVNVF 343 (788)
T ss_pred EEeecccchhhhhheeeecCcccccccccCceEEEEEeeccceeeeE
Confidence 444555556667778899999999999999999999886543 4444
No 496
>KOG3535|consensus
Probab=50.48 E-value=60 Score=22.65 Aligned_cols=54 Identities=19% Similarity=0.197 Sum_probs=35.8
Q ss_pred EEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEcc----CCC-eEEEeecCCeEEEEeCCCCC
Q psy14458 64 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSP----SAY-YLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 64 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~----~~~-~~~~~~~d~~i~~~~~~~~~ 123 (125)
+.-+-+| |+|+|-+++-.. |..+|+.|.|.. |.+ +=..++..|.-+++-+.++.
T Consensus 96 l~Is~~G-IKI~DEKtGav~-----H~hpV~~ISfIArD~tD~RAFGyVcG~eG~hkF~aIKTaQ 154 (557)
T KOG3535|consen 96 LQISIDG-IKILDEKTGAVL-----HNHPVSRISFIARDSTDARAFGYVCGEEGKHKFYAIKTAQ 154 (557)
T ss_pred EEEeecc-eEEeecccccee-----ccCccceeeeeecccccccceeeeecCCCceeEEEEeccc
Confidence 3333343 789987777654 566677777755 333 34667778999999887764
No 497
>KOG2467|consensus
Probab=49.89 E-value=13 Score=25.29 Aligned_cols=18 Identities=39% Similarity=0.624 Sum_probs=16.0
Q ss_pred CeeecCCCeEEEEECCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGS 18 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~ 18 (125)
|+||+.|+.+.+||++..
T Consensus 344 lvtgGTDnHlvLvDLr~~ 361 (477)
T KOG2467|consen 344 LVTGGTDNHLVLVDLRPK 361 (477)
T ss_pred EecCCccceEEEEecccc
Confidence 589999999999999853
No 498
>COG3211 PhoX Predicted phosphatase [General function prediction only]
Probab=49.32 E-value=94 Score=22.77 Aligned_cols=58 Identities=19% Similarity=0.264 Sum_probs=34.1
Q ss_pred eEEEEECCCCCEEEEEeCCC------cEEEEEc-----CCCceeEEeC-CCCCceeEEEEccCCCeEEEe
Q psy14458 51 VSALCVDPSGRLMVSGHEDS------SCVLYDI-----RGSRPLQTFK-PHTADVRSIRFSPSAYYLLTG 108 (125)
Q Consensus 51 i~~~~~~~~~~~~~~~~~~~------~i~~~d~-----~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~ 108 (125)
.-.++|.|.|.+.+..+..+ ..-+|.+ .+++...-+. ....++...+|+||++.++.+
T Consensus 502 PDnl~fD~~GrLWi~TDg~~s~~~~~~~G~~~m~~~~p~~g~~~rf~t~P~g~E~tG~~FspD~~TlFV~ 571 (616)
T COG3211 502 PDNLAFDPWGRLWIQTDGSGSTLRNRFRGVTQMLTPDPKTGTIKRFLTGPIGCEFTGPCFSPDGKTLFVN 571 (616)
T ss_pred CCceEECCCCCEEEEecCCCCccCcccccccccccCCCccceeeeeccCCCcceeecceeCCCCceEEEE
Confidence 45678888888877654222 1223321 1223222222 355688999999998776654
No 499
>PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B.
Probab=48.90 E-value=25 Score=15.46 Aligned_cols=23 Identities=22% Similarity=0.345 Sum_probs=11.5
Q ss_pred cCCCeEEEeecCC------eEEEEeCCCC
Q psy14458 100 PSAYYLLTGGYDN------KLVLTDLQGT 122 (125)
Q Consensus 100 ~~~~~~~~~~~d~------~i~~~~~~~~ 122 (125)
+++.+++.|+.+. .+.+||+.+.
T Consensus 11 ~~~~i~v~GG~~~~~~~~~d~~~~d~~~~ 39 (49)
T PF13418_consen 11 GDNSIYVFGGRDSSGSPLNDLWIFDIETN 39 (49)
T ss_dssp -TTEEEEE--EEE-TEE---EEEEETTTT
T ss_pred eCCeEEEECCCCCCCcccCCEEEEECCCC
Confidence 4566666666432 3667777654
No 500
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=48.80 E-value=94 Score=21.97 Aligned_cols=53 Identities=11% Similarity=0.167 Sum_probs=34.0
Q ss_pred CCEEEEEeCCCcEEEEEcCCC------ceeEEeCCCCCceeEEEEccCC-CeEEEeecCCe
Q psy14458 60 GRLMVSGHEDSSCVLYDIRGS------RPLQTFKPHTADVRSIRFSPSA-YYLLTGGYDNK 113 (125)
Q Consensus 60 ~~~~~~~~~~~~i~~~d~~~~------~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~d~~ 113 (125)
+++|+.+-..+.|....+... +....+.. .+.++.+...||| .+.+....+|.
T Consensus 369 g~llv~~L~~~~l~r~~l~~~~~~v~~~~~~~~~~-~~RiRdv~~~pDg~~iy~~td~~g~ 428 (454)
T TIGR03606 369 NSLLIPSLKRGVIYRIKLDPDYSTVYGDAVPMFKT-NNRYRDVIASPDGNVLYVATDNFGN 428 (454)
T ss_pred CCEEEEEcCCCeEEEEEecCCcceecceeEEeecC-CCeeEEEEECCCCCEEEEEEcCCCc
Confidence 567777777777877777543 11222333 5789999999997 55555444444
Done!