Query psy14458
Match_columns 125
No_of_seqs 142 out of 1859
Neff 11.5
Searched_HMMs 29240
Date Fri Aug 16 20:21:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14458.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14458hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h5i_A Guanine nucleotide-exch 99.9 2.9E-26 9.9E-31 146.7 16.7 120 2-122 151-344 (365)
2 3ow8_A WD repeat-containing pr 99.9 4.2E-25 1.4E-29 139.2 16.7 120 1-120 179-320 (321)
3 4gqb_B Methylosome protein 50; 99.9 3.7E-25 1.3E-29 140.7 16.5 122 1-122 142-290 (344)
4 2ynn_A Coatomer subunit beta'; 99.9 1.1E-24 3.9E-29 136.1 17.1 123 1-123 28-174 (304)
5 3ow8_A WD repeat-containing pr 99.9 1.3E-24 4.3E-29 137.0 16.1 123 1-123 95-239 (321)
6 1vyh_C Platelet-activating fac 99.9 2.5E-24 8.4E-29 139.5 17.7 122 1-122 123-266 (410)
7 1got_B GT-beta; complex (GTP-b 99.9 2.2E-24 7.6E-29 136.6 16.6 118 1-118 199-340 (340)
8 3frx_A Guanine nucleotide-bind 99.9 8.1E-24 2.8E-28 133.1 17.6 122 1-122 80-228 (319)
9 2pbi_B Guanine nucleotide-bind 99.9 6.9E-24 2.3E-28 135.1 17.1 118 1-118 213-354 (354)
10 4gqb_B Methylosome protein 50; 99.9 3.2E-24 1.1E-28 136.4 15.4 103 1-123 96-203 (344)
11 2ynn_A Coatomer subunit beta'; 99.9 1.5E-23 5E-28 131.1 17.1 123 1-123 112-261 (304)
12 3iz6_a 40S ribosomal protein R 99.9 8.3E-24 2.8E-28 135.8 16.2 124 1-124 221-378 (380)
13 1got_B GT-beta; complex (GTP-b 99.9 7E-24 2.4E-28 134.3 15.4 102 1-122 157-258 (340)
14 1vyh_C Platelet-activating fac 99.9 1.9E-23 6.5E-28 135.3 17.6 123 1-123 207-371 (410)
15 4ery_A WD repeat-containing pr 99.9 3.8E-23 1.3E-27 129.2 18.0 123 1-123 38-182 (312)
16 2xzm_R RACK1; ribosome, transl 99.9 4E-23 1.4E-27 130.9 18.1 121 1-122 91-245 (343)
17 4g56_B MGC81050 protein; prote 99.9 2.9E-23 1E-27 132.4 17.2 122 1-122 154-302 (357)
18 4g56_B MGC81050 protein; prote 99.9 1.6E-23 5.6E-28 133.6 13.9 101 1-122 242-344 (357)
19 2pm7_B Protein transport prote 99.9 1E-22 3.5E-27 126.9 17.2 122 1-122 70-239 (297)
20 2pbi_B Guanine nucleotide-bind 99.9 4.6E-23 1.6E-27 131.4 15.6 102 1-122 169-272 (354)
21 2xzm_R RACK1; ribosome, transl 99.9 2.6E-23 8.8E-28 131.8 14.0 101 1-121 42-149 (343)
22 3dm0_A Maltose-binding peripla 99.9 9.5E-23 3.3E-27 139.2 17.3 123 1-123 445-594 (694)
23 2w18_A PALB2, fancn, partner a 99.9 1.7E-23 5.8E-28 132.1 12.5 120 1-120 196-356 (356)
24 2hes_X YDR267CP; beta-propelle 99.9 1.3E-22 4.3E-27 128.2 16.5 122 1-122 27-185 (330)
25 1erj_A Transcriptional repress 99.9 1.6E-22 5.6E-27 130.3 17.3 122 1-122 138-288 (393)
26 3frx_A Guanine nucleotide-bind 99.9 3.1E-23 1E-27 130.4 13.2 101 1-121 33-138 (319)
27 3iz6_a 40S ribosomal protein R 99.9 1.7E-22 5.8E-27 129.7 16.8 122 1-122 173-330 (380)
28 1nr0_A Actin interacting prote 99.9 1.6E-22 5.4E-27 136.6 17.4 122 1-122 74-222 (611)
29 3fm0_A Protein CIAO1; WDR39,SG 99.9 1.2E-22 4.3E-27 128.9 16.0 120 1-120 76-224 (345)
30 1nr0_A Actin interacting prote 99.9 7.8E-23 2.7E-27 138.1 15.0 102 1-122 163-271 (611)
31 3vu4_A KMHSV2; beta-propeller 99.9 1.5E-22 5.3E-27 129.0 15.3 99 4-122 155-272 (355)
32 3fm0_A Protein CIAO1; WDR39,SG 99.9 2.1E-22 7.2E-27 127.8 15.7 122 1-122 31-182 (345)
33 3f3f_A Nucleoporin SEH1; struc 99.9 2E-22 6.8E-27 126.4 15.0 123 1-123 127-339 (351)
34 3lrv_A PRE-mRNA-splicing facto 99.9 2.2E-22 7.5E-27 127.5 15.0 103 1-123 142-246 (343)
35 4ery_A WD repeat-containing pr 99.9 1.1E-21 3.8E-26 122.6 17.9 122 1-122 80-224 (312)
36 2hes_X YDR267CP; beta-propelle 99.9 3.2E-22 1.1E-26 126.3 15.2 121 1-121 73-230 (330)
37 2ymu_A WD-40 repeat protein; u 99.9 2.9E-22 1E-26 133.7 15.4 116 1-118 441-577 (577)
38 3vl1_A 26S proteasome regulato 99.9 2E-22 6.8E-27 130.0 13.9 102 1-122 112-213 (420)
39 4aow_A Guanine nucleotide-bind 99.9 1.2E-21 4.1E-26 123.1 16.2 123 1-124 188-340 (340)
40 4ggc_A P55CDC, cell division c 99.9 2.2E-21 7.5E-26 120.9 17.0 122 1-122 165-316 (318)
41 2aq5_A Coronin-1A; WD40 repeat 99.9 8.6E-22 2.9E-26 126.9 15.0 102 1-122 97-208 (402)
42 3dwl_C Actin-related protein 2 99.9 4.4E-22 1.5E-26 127.0 12.9 123 1-124 70-239 (377)
43 3k26_A Polycomb protein EED; W 99.9 1.5E-21 5E-26 123.6 15.1 102 1-122 88-193 (366)
44 2pm9_A Protein WEB1, protein t 99.9 4.1E-21 1.4E-25 123.6 16.7 123 1-123 181-339 (416)
45 3bg1_A Protein SEC13 homolog; 99.9 3.9E-22 1.3E-26 125.3 11.6 121 1-121 74-247 (316)
46 4aow_A Guanine nucleotide-bind 99.9 7.4E-21 2.5E-25 119.5 17.5 122 1-122 54-247 (340)
47 1erj_A Transcriptional repress 99.9 2E-21 7E-26 125.1 15.2 122 1-122 222-390 (393)
48 4gga_A P55CDC, cell division c 99.9 2.2E-21 7.4E-26 125.8 15.3 99 3-122 296-396 (420)
49 2pm7_B Protein transport prote 99.9 2.3E-21 7.7E-26 120.8 14.5 102 1-122 24-133 (297)
50 4aez_A CDC20, WD repeat-contai 99.9 7.6E-21 2.6E-25 122.6 16.9 123 1-123 149-295 (401)
51 3bg1_A Protein SEC13 homolog; 99.9 1E-21 3.6E-26 123.3 12.5 102 1-122 28-137 (316)
52 3jrp_A Fusion protein of prote 99.9 6.4E-21 2.2E-25 121.1 16.2 123 1-123 72-242 (379)
53 2ymu_A WD-40 repeat protein; u 99.9 5.5E-21 1.9E-25 127.6 16.6 118 1-120 400-538 (577)
54 3dm0_A Maltose-binding peripla 99.9 1.9E-21 6.4E-26 132.8 14.6 101 1-121 398-503 (694)
55 1sq9_A Antiviral protein SKI8; 99.9 5.9E-21 2E-25 122.3 16.0 122 1-122 200-396 (397)
56 3zwl_B Eukaryotic translation 99.9 6.7E-21 2.3E-25 120.6 16.0 122 1-123 89-251 (369)
57 4gq1_A NUP37; propeller, trans 99.9 2.3E-22 8E-27 129.6 9.4 103 1-123 104-220 (393)
58 3ei3_B DNA damage-binding prot 99.9 6.6E-21 2.2E-25 121.9 15.7 121 1-122 89-237 (383)
59 2j04_B YDR362CP, TAU91; beta p 99.9 1.1E-21 3.8E-26 130.7 12.5 122 1-122 280-429 (524)
60 3dwl_C Actin-related protein 2 99.9 1E-21 3.5E-26 125.3 11.5 120 1-120 26-176 (377)
61 4a11_B DNA excision repair pro 99.9 2.1E-20 7.3E-25 119.7 17.6 123 1-123 159-367 (408)
62 3vl1_A 26S proteasome regulato 99.9 2.5E-20 8.6E-25 120.2 17.7 124 1-124 154-325 (420)
63 4e54_B DNA damage-binding prot 99.9 2.6E-21 8.9E-26 126.0 13.1 122 1-123 135-284 (435)
64 3f3f_A Nucleoporin SEH1; struc 99.9 7.9E-21 2.7E-25 119.1 14.8 103 1-123 26-145 (351)
65 1r5m_A SIR4-interacting protei 99.9 9.5E-21 3.2E-25 121.8 14.2 121 1-121 262-425 (425)
66 3v7d_B Cell division control p 99.9 1.6E-20 5.6E-25 122.7 15.4 102 1-123 135-238 (464)
67 4aez_A CDC20, WD repeat-contai 99.9 1.2E-20 4E-25 121.8 14.1 123 1-123 232-382 (401)
68 2oaj_A Protein SNI1; WD40 repe 99.9 6.3E-21 2.2E-25 133.6 13.8 112 1-122 450-606 (902)
69 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.9E-20 6.6E-25 122.3 15.3 121 2-123 119-273 (450)
70 1gxr_A ESG1, transducin-like e 99.9 8.3E-20 2.9E-24 114.4 17.4 122 1-123 156-298 (337)
71 3sfz_A APAF-1, apoptotic pepti 99.9 3.5E-20 1.2E-24 132.6 17.2 122 1-122 630-775 (1249)
72 3odt_A Protein DOA1; ubiquitin 99.9 1.6E-20 5.3E-25 116.8 13.4 100 1-122 198-297 (313)
73 4e54_B DNA damage-binding prot 99.9 9.4E-21 3.2E-25 123.4 12.8 123 1-123 180-329 (435)
74 1pgu_A Actin interacting prote 99.9 9.7E-21 3.3E-25 126.8 13.3 100 1-121 503-614 (615)
75 2aq5_A Coronin-1A; WD40 repeat 99.9 1.6E-20 5.5E-25 121.0 13.7 104 1-124 147-257 (402)
76 3mmy_A MRNA export factor; mRN 99.9 2.3E-20 7.7E-25 118.1 14.1 102 1-123 57-162 (368)
77 3gre_A Serine/threonine-protei 99.9 4.5E-21 1.5E-25 124.5 11.0 103 1-123 185-294 (437)
78 1k8k_C P40, ARP2/3 complex 41 99.9 7.1E-20 2.4E-24 116.3 16.3 122 1-122 67-234 (372)
79 1sq9_A Antiviral protein SKI8; 99.9 1.7E-20 6E-25 120.1 13.5 121 1-122 141-323 (397)
80 3dw8_B Serine/threonine-protei 99.9 2.7E-20 9.2E-25 120.8 14.5 122 1-123 43-260 (447)
81 3mkq_A Coatomer beta'-subunit; 99.9 3E-20 1E-24 128.1 15.4 123 1-123 28-174 (814)
82 2xyi_A Probable histone-bindin 99.9 5.1E-20 1.8E-24 119.8 15.7 123 1-123 144-311 (430)
83 2j04_B YDR362CP, TAU91; beta p 99.9 1.3E-20 4.4E-25 125.6 12.5 123 1-123 228-388 (524)
84 3ei3_B DNA damage-binding prot 99.9 4E-20 1.4E-24 118.3 14.3 102 1-124 178-285 (383)
85 1gxr_A ESG1, transducin-like e 99.9 9E-20 3.1E-24 114.2 15.5 102 1-122 112-215 (337)
86 3zwl_B Eukaryotic translation 99.9 1.7E-19 5.8E-24 114.1 16.6 122 1-122 190-347 (369)
87 1pgu_A Actin interacting prote 99.8 1E-19 3.4E-24 121.9 16.0 123 1-123 81-240 (615)
88 3v7d_B Cell division control p 99.8 8E-20 2.7E-24 119.4 15.1 101 1-123 283-383 (464)
89 3jrp_A Fusion protein of prote 99.8 3.7E-20 1.3E-24 117.6 13.2 102 1-122 26-135 (379)
90 2oaj_A Protein SNI1; WD40 repe 99.8 7.1E-20 2.4E-24 128.4 15.5 120 1-122 72-243 (902)
91 1k8k_C P40, ARP2/3 complex 41 99.8 1.6E-19 5.4E-24 114.6 15.8 120 1-120 23-172 (372)
92 3jro_A Fusion protein of prote 99.8 7.7E-20 2.6E-24 126.1 15.1 122 1-122 70-239 (753)
93 2xyi_A Probable histone-bindin 99.8 2.1E-19 7.3E-24 116.9 16.1 121 1-121 247-410 (430)
94 3lrv_A PRE-mRNA-splicing facto 99.8 1.5E-19 5.1E-24 114.5 14.9 113 1-124 88-204 (343)
95 3i2n_A WD repeat-containing pr 99.8 6.5E-20 2.2E-24 115.8 12.7 122 1-122 132-292 (357)
96 1r5m_A SIR4-interacting protei 99.8 2.7E-19 9.4E-24 115.0 15.8 121 1-122 220-362 (425)
97 3i2n_A WD repeat-containing pr 99.8 2E-20 7E-25 118.1 10.2 103 1-123 227-355 (357)
98 1p22_A F-BOX/WD-repeat protein 99.8 3.1E-19 1E-23 116.2 15.9 118 1-122 186-326 (435)
99 3k26_A Polycomb protein EED; W 99.8 2E-20 7E-25 118.3 9.8 114 1-121 244-366 (366)
100 1yfq_A Cell cycle arrest prote 99.8 9.2E-20 3.2E-24 114.7 12.5 122 1-123 115-284 (342)
101 1p22_A F-BOX/WD-repeat protein 99.8 7.9E-20 2.7E-24 118.9 12.3 119 1-123 269-416 (435)
102 4gga_A P55CDC, cell division c 99.8 3.6E-19 1.2E-23 115.5 15.1 102 2-123 119-220 (420)
103 2ovr_B FBW7, F-BOX/WD repeat p 99.8 5.7E-19 2E-23 115.1 16.1 117 2-122 173-309 (445)
104 3odt_A Protein DOA1; ubiquitin 99.8 4.2E-19 1.4E-23 110.3 14.7 119 1-123 117-257 (313)
105 4a11_B DNA excision repair pro 99.8 1.7E-18 5.7E-23 110.9 17.1 123 1-123 59-220 (408)
106 2j04_A TAU60, YPL007P, hypothe 99.8 1.7E-19 5.7E-24 120.3 12.7 103 1-123 100-213 (588)
107 3gre_A Serine/threonine-protei 99.8 2E-19 7E-24 116.7 12.9 114 1-122 126-246 (437)
108 2pm9_A Protein WEB1, protein t 99.8 8.2E-19 2.8E-23 112.9 15.5 123 1-123 82-251 (416)
109 2ovr_B FBW7, F-BOX/WD repeat p 99.8 7E-19 2.4E-23 114.7 15.0 118 1-122 132-269 (445)
110 2oit_A Nucleoporin 214KDA; NH2 99.8 3.6E-20 1.2E-24 121.0 8.6 98 3-120 113-222 (434)
111 3jro_A Fusion protein of prote 99.8 3.7E-19 1.2E-23 122.8 13.6 102 1-122 24-133 (753)
112 3dw8_B Serine/threonine-protei 99.8 6E-19 2E-23 114.5 13.8 106 1-121 192-315 (447)
113 2j04_A TAU60, YPL007P, hypothe 99.8 4.2E-19 1.4E-23 118.4 13.2 114 1-122 30-161 (588)
114 3mkq_A Coatomer beta'-subunit; 99.8 1.2E-18 4.2E-23 120.1 15.6 123 1-123 112-261 (814)
115 4gq1_A NUP37; propeller, trans 99.8 2.5E-19 8.6E-24 115.5 11.1 102 1-122 159-287 (393)
116 3mmy_A MRNA export factor; mRN 99.8 1.7E-19 5.7E-24 114.1 9.8 111 1-119 231-344 (368)
117 4ggc_A P55CDC, cell division c 99.8 2.7E-18 9.2E-23 107.0 14.4 102 2-123 39-140 (318)
118 3sfz_A APAF-1, apoptotic pepti 99.8 1.6E-19 5.5E-24 129.2 9.1 122 1-123 1018-1160(1249)
119 3vu4_A KMHSV2; beta-propeller 99.8 9.6E-18 3.3E-22 106.9 15.1 119 2-123 75-229 (355)
120 2vdu_B TRNA (guanine-N(7)-)-me 99.8 1.4E-17 4.8E-22 108.8 14.0 98 1-119 213-337 (450)
121 1yfq_A Cell cycle arrest prote 99.8 4.3E-18 1.5E-22 107.0 10.8 99 1-121 26-131 (342)
122 2w18_A PALB2, fancn, partner a 99.8 9.3E-18 3.2E-22 106.2 11.6 114 9-122 136-270 (356)
123 1l0q_A Surface layer protein; 99.7 2.9E-16 1E-20 100.5 14.2 100 1-122 5-106 (391)
124 3bws_A Protein LP49; two-domai 99.7 2.8E-16 9.6E-21 101.8 11.4 102 1-122 137-244 (433)
125 1l0q_A Surface layer protein; 99.7 3.5E-15 1.2E-19 95.5 15.9 119 2-122 48-190 (391)
126 4h5i_A Guanine nucleotide-exch 99.7 7.3E-16 2.5E-20 98.6 11.4 107 2-121 98-206 (365)
127 3bws_A Protein LP49; two-domai 99.7 4.1E-15 1.4E-19 96.3 13.8 101 1-122 184-293 (433)
128 2oit_A Nucleoporin 214KDA; NH2 99.7 1.8E-15 6.3E-20 98.9 12.1 101 1-122 165-279 (434)
129 1nir_A Nitrite reductase; hemo 99.6 5.7E-14 1.9E-18 94.2 14.3 100 1-122 152-258 (543)
130 2hqs_A Protein TOLB; TOLB, PAL 99.6 8.8E-14 3E-18 90.4 13.5 93 8-122 159-257 (415)
131 2hqs_A Protein TOLB; TOLB, PAL 99.6 4.9E-13 1.7E-17 86.9 15.1 101 1-123 193-302 (415)
132 3u4y_A Uncharacterized protein 99.5 7.8E-13 2.7E-17 82.9 12.8 101 1-122 13-118 (331)
133 1k32_A Tricorn protease; prote 99.5 2E-12 6.8E-17 92.1 13.3 74 49-122 379-462 (1045)
134 2ecf_A Dipeptidyl peptidase IV 99.5 1.2E-12 4.2E-17 89.9 11.6 120 1-122 51-182 (741)
135 3vgz_A Uncharacterized protein 99.5 6.5E-12 2.2E-16 79.2 13.9 110 2-122 105-216 (353)
136 2ojh_A Uncharacterized protein 99.4 3.1E-12 1E-16 78.5 11.7 95 3-119 17-115 (297)
137 1jmx_B Amine dehydrogenase; ox 99.4 3.4E-12 1.2E-16 80.3 12.1 102 1-121 14-134 (349)
138 1pby_B Quinohemoprotein amine 99.4 3.6E-12 1.2E-16 79.7 12.2 103 1-122 4-125 (337)
139 1xfd_A DIP, dipeptidyl aminope 99.4 6E-13 2.1E-17 91.2 9.1 101 4-123 33-145 (723)
140 3vgz_A Uncharacterized protein 99.4 1.4E-11 4.9E-16 77.6 13.3 99 5-123 161-264 (353)
141 1nir_A Nitrite reductase; hemo 99.4 4.8E-12 1.6E-16 84.9 11.4 102 2-123 386-516 (543)
142 1z68_A Fibroblast activation p 99.4 1.2E-12 4E-17 89.9 8.4 102 2-122 30-140 (719)
143 3o4h_A Acylamino-acid-releasin 99.4 2.1E-12 7.3E-17 86.8 9.1 90 8-119 175-274 (582)
144 2ojh_A Uncharacterized protein 99.4 1.5E-11 5.2E-16 75.3 12.1 75 49-123 173-260 (297)
145 1pby_B Quinohemoprotein amine 99.4 3.2E-11 1.1E-15 75.4 12.2 103 2-122 50-164 (337)
146 3o4h_A Acylamino-acid-releasin 99.3 1.1E-11 3.9E-16 83.3 10.2 71 52-123 153-229 (582)
147 1k32_A Tricorn protease; prote 99.3 1.8E-11 6.3E-16 87.3 11.5 99 1-120 393-501 (1045)
148 1ri6_A Putative isomerase YBHE 99.3 3.1E-11 1E-15 75.7 11.1 97 2-120 9-114 (343)
149 3u4y_A Uncharacterized protein 99.3 8.2E-11 2.8E-15 73.7 13.0 98 3-121 57-160 (331)
150 2ecf_A Dipeptidyl peptidase IV 99.3 6.8E-11 2.3E-15 81.3 12.8 84 8-112 129-230 (741)
151 4a5s_A Dipeptidyl peptidase 4 99.3 3.6E-11 1.2E-15 83.1 11.3 99 7-122 35-142 (740)
152 1ri6_A Putative isomerase YBHE 99.3 7.9E-11 2.7E-15 73.8 11.4 98 3-121 101-209 (343)
153 1jmx_B Amine dehydrogenase; ox 99.3 4.5E-10 1.5E-14 70.6 14.8 72 49-123 255-327 (349)
154 1xfd_A DIP, dipeptidyl aminope 99.3 3.3E-11 1.1E-15 82.6 10.0 87 7-112 90-194 (723)
155 2z3z_A Dipeptidyl aminopeptida 99.3 8.8E-11 3E-15 80.5 11.8 73 50-122 182-294 (706)
156 2z3z_A Dipeptidyl aminopeptida 99.2 6.5E-11 2.2E-15 81.1 9.9 82 6-109 99-199 (706)
157 3hfq_A Uncharacterized protein 99.2 1.6E-10 5.3E-15 73.1 10.1 72 49-120 86-170 (347)
158 3scy_A Hypothetical bacterial 99.2 7.2E-10 2.5E-14 70.4 13.1 99 4-120 229-336 (361)
159 3hfq_A Uncharacterized protein 99.2 7.8E-10 2.7E-14 69.8 12.5 72 49-120 240-316 (347)
160 1xip_A Nucleoporin NUP159; bet 99.2 3.1E-10 1.1E-14 73.3 10.5 92 2-122 101-192 (388)
161 3scy_A Hypothetical bacterial 99.2 1.7E-09 6E-14 68.6 13.5 72 49-120 211-290 (361)
162 1z68_A Fibroblast activation p 99.2 1.1E-10 3.7E-15 80.2 8.2 83 7-111 89-189 (719)
163 2oiz_A Aromatic amine dehydrog 99.2 3.4E-10 1.2E-14 72.4 9.5 95 6-122 29-141 (361)
164 3no2_A Uncharacterized protein 99.1 3.2E-09 1.1E-13 65.7 12.6 98 1-120 8-107 (276)
165 1qks_A Cytochrome CD1 nitrite 99.1 5.5E-09 1.9E-13 70.6 14.4 99 2-122 171-276 (567)
166 1jof_A Carboxy-CIS,CIS-muconat 99.1 6.9E-09 2.3E-13 66.2 13.6 99 6-120 117-223 (365)
167 3fvz_A Peptidyl-glycine alpha- 99.1 2.8E-09 9.7E-14 67.2 10.3 103 2-122 212-323 (329)
168 1q7f_A NHL, brain tumor CG1071 99.0 1.8E-08 6.2E-13 62.0 13.5 72 49-122 207-281 (286)
169 3azo_A Aminopeptidase; POP fam 99.0 2.9E-09 9.8E-14 72.6 10.5 74 49-122 188-275 (662)
170 3pe7_A Oligogalacturonate lyas 99.0 7.6E-09 2.6E-13 66.1 10.4 70 54-123 41-113 (388)
171 2bkl_A Prolyl endopeptidase; m 99.0 1E-08 3.5E-13 70.6 11.2 98 3-121 142-261 (695)
172 2dg1_A DRP35, lactonase; beta 99.0 1.9E-08 6.4E-13 63.2 11.2 74 49-122 45-122 (333)
173 1jof_A Carboxy-CIS,CIS-muconat 99.0 3.8E-09 1.3E-13 67.4 8.1 70 51-120 85-175 (365)
174 1xip_A Nucleoporin NUP159; bet 99.0 9.1E-09 3.1E-13 66.6 9.7 81 1-107 139-230 (388)
175 3pe7_A Oligogalacturonate lyas 98.9 2.9E-08 9.9E-13 63.4 11.6 95 9-123 61-179 (388)
176 1q7f_A NHL, brain tumor CG1071 98.9 1.2E-07 4E-12 58.4 13.5 72 49-121 164-238 (286)
177 2xdw_A Prolyl endopeptidase; a 98.9 1.8E-08 6.1E-13 69.5 10.6 92 9-121 152-268 (710)
178 1rwi_B Serine/threonine-protei 98.9 8.5E-08 2.9E-12 58.4 12.0 75 49-123 192-266 (270)
179 2dg1_A DRP35, lactonase; beta 98.9 1.9E-07 6.4E-12 58.6 13.8 73 49-121 87-171 (333)
180 3fvz_A Peptidyl-glycine alpha- 98.9 1.8E-07 6.2E-12 58.9 13.4 73 49-122 143-228 (329)
181 4a5s_A Dipeptidyl peptidase 4 98.9 2.6E-08 8.8E-13 69.0 9.8 82 8-111 92-191 (740)
182 2gop_A Trilobed protease; beta 98.8 6.9E-08 2.4E-12 60.8 9.9 59 50-110 60-123 (347)
183 3azo_A Aminopeptidase; POP fam 98.8 7.9E-08 2.7E-12 65.5 10.8 72 49-121 242-325 (662)
184 3sjl_D Methylamine dehydrogena 98.8 1.3E-07 4.3E-12 61.2 10.2 95 7-123 58-171 (386)
185 2oiz_A Aromatic amine dehydrog 98.8 1.6E-07 5.5E-12 60.1 10.7 73 8-103 286-360 (361)
186 1pjx_A Dfpase, DIISOPROPYLFLUO 98.7 9.6E-07 3.3E-11 54.8 13.1 74 49-122 226-300 (314)
187 3dsm_A Uncharacterized protein 98.7 4.9E-07 1.7E-11 57.0 11.8 95 6-123 150-255 (328)
188 3c5m_A Oligogalacturonate lyas 98.7 2.2E-07 7.5E-12 59.3 10.3 75 48-123 187-275 (396)
189 2mad_H Methylamine dehydrogena 98.7 8.7E-07 3E-11 57.1 12.9 92 9-123 48-158 (373)
190 1rwi_B Serine/threonine-protei 98.7 7.3E-07 2.5E-11 54.2 11.6 74 49-122 150-223 (270)
191 3c5m_A Oligogalacturonate lyas 98.7 1.8E-07 6.2E-12 59.7 8.7 72 51-123 38-113 (396)
192 3c75_H MADH, methylamine dehyd 98.7 3.1E-07 1E-11 60.2 9.5 93 8-122 99-210 (426)
193 3e5z_A Putative gluconolactona 98.7 7.9E-07 2.7E-11 55.0 11.0 72 49-122 28-100 (296)
194 3dsm_A Uncharacterized protein 98.7 1.2E-06 4E-11 55.3 11.9 99 2-122 58-162 (328)
195 3e5z_A Putative gluconolactona 98.6 1.2E-06 4.2E-11 54.1 11.5 84 2-107 44-131 (296)
196 1mda_H Methylamine dehydrogena 98.6 2.3E-07 7.9E-12 59.7 8.1 90 9-120 47-157 (368)
197 2hz6_A Endoplasmic reticulum t 98.6 5.5E-09 1.9E-13 67.1 0.5 101 1-123 12-113 (369)
198 3no2_A Uncharacterized protein 98.6 1.1E-06 3.8E-11 54.3 10.0 71 51-123 127-197 (276)
199 2bkl_A Prolyl endopeptidase; m 98.5 6.9E-07 2.4E-11 61.6 9.4 73 49-123 121-213 (695)
200 2xdw_A Prolyl endopeptidase; a 98.5 4.8E-07 1.6E-11 62.5 8.4 74 49-123 125-219 (710)
201 1yr2_A Prolyl oligopeptidase; 98.5 7.1E-07 2.4E-11 62.0 9.1 70 52-122 212-304 (741)
202 1qks_A Cytochrome CD1 nitrite 98.5 7.7E-06 2.6E-10 55.5 13.8 100 2-122 212-374 (567)
203 2hz6_A Endoplasmic reticulum t 98.5 4.1E-08 1.4E-12 63.0 2.3 97 1-123 95-194 (369)
204 2mad_H Methylamine dehydrogena 98.5 1.8E-05 6.2E-10 51.0 14.1 72 51-123 269-352 (373)
205 1kb0_A Quinohemoprotein alcoho 98.4 6.3E-06 2.2E-10 57.0 11.5 121 2-123 331-509 (677)
206 2z2n_A Virginiamycin B lyase; 98.4 4.1E-05 1.4E-09 46.9 13.9 71 49-119 57-127 (299)
207 2z2n_A Virginiamycin B lyase; 98.4 4.8E-05 1.6E-09 46.6 13.9 70 49-119 99-169 (299)
208 3hrp_A Uncharacterized protein 98.4 2.3E-05 7.7E-10 51.1 12.3 68 54-122 176-250 (409)
209 1yiq_A Quinohemoprotein alcoho 98.3 8.4E-06 2.9E-10 56.5 10.6 54 69-123 454-507 (689)
210 3iuj_A Prolyl endopeptidase; h 98.2 2E-05 6.7E-10 54.6 10.0 70 52-122 178-269 (693)
211 3g4e_A Regucalcin; six bladed 98.2 3.8E-05 1.3E-09 47.7 10.5 61 49-109 199-260 (297)
212 2qc5_A Streptogramin B lactona 98.2 0.00019 6.7E-09 43.9 13.6 71 49-120 62-133 (300)
213 2qc5_A Streptogramin B lactona 98.2 0.00023 7.9E-09 43.6 13.8 71 49-120 104-175 (300)
214 2gop_A Trilobed protease; beta 98.2 4.3E-05 1.5E-09 48.0 10.3 65 49-119 263-329 (347)
215 3nok_A Glutaminyl cyclase; bet 98.1 0.00031 1.1E-08 43.3 12.6 97 2-122 69-165 (268)
216 3hrp_A Uncharacterized protein 98.1 0.0002 6.7E-09 46.7 12.1 73 49-121 219-298 (409)
217 1pjx_A Dfpase, DIISOPROPYLFLUO 98.1 0.00015 5.1E-09 44.9 11.0 74 49-122 172-257 (314)
218 1yr2_A Prolyl oligopeptidase; 98.0 0.00021 7.3E-09 49.7 12.7 72 50-122 269-351 (741)
219 2ghs_A AGR_C_1268P; regucalcin 98.0 0.00032 1.1E-08 44.2 12.4 60 49-109 230-290 (326)
220 3sjl_D Methylamine dehydrogena 98.0 0.00014 4.8E-09 47.2 10.4 99 6-121 107-208 (386)
221 3q7m_A Lipoprotein YFGL, BAMB; 98.0 0.00044 1.5E-08 44.1 12.4 107 2-123 57-164 (376)
222 3g4e_A Regucalcin; six bladed 98.0 0.00042 1.4E-08 43.0 11.7 74 49-122 149-230 (297)
223 2ece_A 462AA long hypothetical 97.9 0.00019 6.6E-09 47.4 10.3 107 2-122 100-238 (462)
224 2iwa_A Glutamine cyclotransfer 97.9 0.00062 2.1E-08 42.0 12.0 94 7-122 43-136 (266)
225 2iwa_A Glutamine cyclotransfer 97.9 0.00018 6.3E-09 44.4 9.6 96 5-123 83-183 (266)
226 2qe8_A Uncharacterized protein 97.9 0.00015 5.2E-09 45.9 9.4 115 6-120 143-277 (343)
227 3dr2_A Exported gluconolactona 97.9 0.0005 1.7E-08 42.8 11.6 58 49-107 86-147 (305)
228 3q7m_A Lipoprotein YFGL, BAMB; 97.9 0.00061 2.1E-08 43.5 12.0 96 2-123 243-339 (376)
229 3nok_A Glutaminyl cyclase; bet 97.9 0.0002 6.7E-09 44.2 9.0 95 5-123 113-212 (268)
230 3nol_A Glutamine cyclotransfer 97.9 0.00016 5.3E-09 44.5 8.5 95 5-123 104-203 (262)
231 3mbr_X Glutamine cyclotransfer 97.8 0.00031 1.1E-08 42.8 9.4 95 5-123 82-181 (243)
232 2qe8_A Uncharacterized protein 97.8 0.002 6.7E-08 40.8 13.7 98 7-118 92-223 (343)
233 3hxj_A Pyrrolo-quinoline quino 97.8 0.00046 1.6E-08 42.9 10.1 65 50-119 178-242 (330)
234 3nol_A Glutamine cyclotransfer 97.8 0.0017 5.8E-08 40.0 12.1 96 3-122 58-156 (262)
235 2ad6_A Methanol dehydrogenase 97.8 0.00027 9.1E-09 48.1 9.4 54 69-123 443-496 (571)
236 3hxj_A Pyrrolo-quinoline quino 97.8 0.00042 1.4E-08 43.1 9.7 64 50-118 138-201 (330)
237 3iuj_A Prolyl endopeptidase; h 97.8 6.5E-05 2.2E-09 52.0 6.3 74 48-123 128-219 (693)
238 3c75_H MADH, methylamine dehyd 97.8 0.00011 3.9E-09 48.2 7.0 69 54-123 324-404 (426)
239 1mda_H Methylamine dehydrogena 97.7 0.00022 7.7E-09 46.0 8.0 69 54-123 269-348 (368)
240 3dr2_A Exported gluconolactona 97.7 0.00066 2.3E-08 42.2 9.8 70 49-120 45-115 (305)
241 1kv9_A Type II quinohemoprotei 97.7 0.00034 1.2E-08 48.4 9.1 54 69-123 437-490 (668)
242 1yiq_A Quinohemoprotein alcoho 97.7 0.00015 5E-09 50.4 7.2 80 7-107 454-534 (689)
243 1flg_A Protein (quinoprotein e 97.7 0.001 3.5E-08 45.4 10.8 54 69-123 465-518 (582)
244 2ece_A 462AA long hypothetical 97.6 0.0019 6.7E-08 42.8 11.1 94 8-118 164-286 (462)
245 2ghs_A AGR_C_1268P; regucalcin 97.6 0.004 1.4E-07 39.1 12.4 72 49-120 179-259 (326)
246 3mbr_X Glutamine cyclotransfer 97.6 0.0034 1.1E-07 38.3 13.4 97 3-122 36-134 (243)
247 1fwx_A Nitrous oxide reductase 97.5 0.001 3.5E-08 45.4 9.3 72 49-121 277-361 (595)
248 1kb0_A Quinohemoprotein alcoho 97.5 0.0011 3.8E-08 46.0 9.5 79 8-107 457-536 (677)
249 2xe4_A Oligopeptidase B; hydro 97.3 0.0022 7.6E-08 45.0 9.3 71 52-122 224-305 (751)
250 1w6s_A Methanol dehydrogenase 97.3 0.0032 1.1E-07 43.2 9.7 55 68-123 451-505 (599)
251 1kv9_A Type II quinohemoprotei 97.1 0.011 3.8E-07 41.0 10.9 117 7-123 177-335 (668)
252 3pbp_A Nucleoporin NUP82; beta 97.0 0.034 1.2E-06 36.8 12.8 71 50-121 67-158 (452)
253 1npe_A Nidogen, entactin; glyc 97.0 0.023 7.9E-07 34.4 14.5 73 49-121 79-155 (267)
254 1w6s_A Methanol dehydrogenase 96.8 0.015 5.3E-07 39.9 9.4 112 3-123 67-193 (599)
255 1k3i_A Galactose oxidase precu 96.8 0.034 1.2E-06 38.5 11.1 72 51-122 245-324 (656)
256 1npe_A Nidogen, entactin; glyc 96.8 0.035 1.2E-06 33.6 14.2 73 49-121 122-198 (267)
257 1flg_A Protein (quinoprotein e 96.7 0.0059 2E-07 41.7 6.6 81 6-107 464-545 (582)
258 1fwx_A Nitrous oxide reductase 96.7 0.044 1.5E-06 37.7 10.5 90 3-112 107-216 (595)
259 2p4o_A Hypothetical protein; p 96.6 0.053 1.8E-06 33.7 11.0 72 49-122 32-105 (306)
260 2ad6_A Methanol dehydrogenase 96.6 0.0097 3.3E-07 40.6 7.1 81 6-107 442-523 (571)
261 2fp8_A Strictosidine synthase; 96.6 0.057 2E-06 33.7 11.3 71 50-121 127-216 (322)
262 2xe4_A Oligopeptidase B; hydro 96.4 0.017 5.8E-07 40.6 7.3 71 50-122 175-257 (751)
263 3tc9_A Hypothetical hydrolase; 96.4 0.076 2.6E-06 34.9 10.0 71 50-120 227-300 (430)
264 2fp8_A Strictosidine synthase; 96.3 0.093 3.2E-06 32.7 10.3 70 50-120 186-268 (322)
265 3pbp_A Nucleoporin NUP82; beta 96.2 0.13 4.6E-06 34.1 10.8 69 48-117 124-208 (452)
266 3tc9_A Hypothetical hydrolase; 96.2 0.14 4.9E-06 33.6 11.3 72 49-122 179-258 (430)
267 3v64_C Agrin; beta propeller, 96.1 0.13 4.4E-06 32.8 13.4 73 49-122 159-235 (349)
268 2p9w_A MAL S 1 allergenic prot 96.0 0.15 5E-06 32.6 12.5 71 50-121 138-215 (334)
269 1n7d_A LDL receptor, low-densi 95.9 0.083 2.8E-06 37.0 8.7 73 49-121 496-571 (699)
270 3v64_C Agrin; beta propeller, 95.9 0.18 6E-06 32.2 14.0 74 49-122 116-192 (349)
271 3v65_B Low-density lipoprotein 95.8 0.2 6.9E-06 32.4 13.5 74 49-122 202-278 (386)
272 3v65_B Low-density lipoprotein 95.7 0.22 7.6E-06 32.2 12.1 94 29-122 96-191 (386)
273 1ijq_A LDL receptor, low-densi 95.6 0.22 7.4E-06 31.2 14.8 73 49-122 120-196 (316)
274 4a2l_A BT_4663, two-component 95.5 0.42 1.4E-05 33.8 13.9 71 49-121 406-480 (795)
275 3p5b_L Low density lipoprotein 95.5 0.29 9.9E-06 31.9 14.4 74 49-122 202-278 (400)
276 3sov_A LRP-6, low-density lipo 95.4 0.27 9.2E-06 31.0 14.1 74 49-122 122-198 (318)
277 3qqz_A Putative uncharacterize 95.3 0.25 8.6E-06 30.3 10.5 72 49-120 70-150 (255)
278 1ijq_A LDL receptor, low-densi 95.1 0.33 1.1E-05 30.4 13.5 74 49-122 30-109 (316)
279 4hw6_A Hypothetical protein, I 95.1 0.42 1.4E-05 31.5 9.8 73 49-122 182-260 (433)
280 1tl2_A L10, protein (tachylect 95.1 0.047 1.6E-06 33.0 4.6 67 49-119 41-114 (236)
281 3m0c_C LDL receptor, low-densi 95.0 0.65 2.2E-05 33.2 14.8 74 49-122 514-590 (791)
282 2be1_A Serine/threonine-protei 95.0 0.042 1.4E-06 35.1 4.5 106 1-123 13-132 (339)
283 1k3i_A Galactose oxidase precu 94.9 0.1 3.5E-06 36.1 6.7 70 53-122 190-275 (656)
284 4hw6_A Hypothetical protein, I 94.8 0.31 1.1E-05 32.1 8.4 71 50-120 229-303 (433)
285 3amr_A 3-phytase; beta-propell 94.7 0.49 1.7E-05 30.5 12.2 73 49-121 180-263 (355)
286 4a2l_A BT_4663, two-component 94.6 0.79 2.7E-05 32.4 13.0 69 49-121 452-526 (795)
287 3qqz_A Putative uncharacterize 94.6 0.43 1.5E-05 29.2 10.3 72 49-121 27-100 (255)
288 4gq2_M Nucleoporin NUP120; bet 94.4 0.61 2.1E-05 34.1 9.7 39 49-87 236-274 (950)
289 3p5b_L Low density lipoprotein 94.4 0.61 2.1E-05 30.3 12.8 93 30-122 93-191 (400)
290 3sre_A PON1, serum paraoxonase 94.4 0.59 2E-05 30.1 8.8 70 49-121 165-252 (355)
291 3v9f_A Two-component system se 93.9 1.2 3.9E-05 31.6 12.7 71 48-121 449-524 (781)
292 3kya_A Putative phosphatase; s 93.8 0.6 2.1E-05 31.6 8.2 69 51-119 249-339 (496)
293 1n7d_A LDL receptor, low-densi 93.7 0.28 9.4E-06 34.5 6.7 72 50-121 454-528 (699)
294 3m0c_C LDL receptor, low-densi 93.7 1.4 4.6E-05 31.7 12.8 74 49-122 471-547 (791)
295 2p9w_A MAL S 1 allergenic prot 92.9 1.1 3.9E-05 28.6 12.7 71 50-120 64-167 (334)
296 3sbq_A Nitrous-oxide reductase 92.5 1.1 3.6E-05 31.2 7.8 72 49-121 323-408 (638)
297 3v9f_A Two-component system se 92.1 2.3 7.8E-05 30.1 13.2 71 49-122 495-569 (781)
298 3amr_A 3-phytase; beta-propell 91.9 1.7 5.8E-05 28.1 11.7 71 49-120 128-209 (355)
299 2vpj_A Kelch-like protein 12; 91.5 1.5 5.1E-05 26.9 10.0 64 59-122 206-279 (301)
300 3kya_A Putative phosphatase; s 91.3 2.4 8.1E-05 28.8 10.7 71 49-120 186-277 (496)
301 2ism_A Putative oxidoreductase 90.4 2.3 7.9E-05 27.1 10.2 69 49-120 31-113 (352)
302 2p4o_A Hypothetical protein; p 90.0 2.2 7.6E-05 26.3 15.9 73 49-121 72-147 (306)
303 4fhn_B Nucleoporin NUP120; pro 90.0 0.5 1.7E-05 35.2 4.7 38 50-87 239-276 (1139)
304 2xzh_A Clathrin heavy chain 1; 89.9 2.8 9.5E-05 27.2 11.1 71 49-119 260-330 (365)
305 2be1_A Serine/threonine-protei 89.8 1.5 5.2E-05 28.1 6.3 62 61-122 11-77 (339)
306 3a9g_A Putative uncharacterize 88.8 3.2 0.00011 26.5 7.9 70 49-120 29-113 (354)
307 4a0p_A LRP6, LRP-6, low-densit 88.8 4.5 0.00016 28.2 13.4 74 49-122 37-112 (628)
308 3zwu_A Alkaline phosphatase PH 88.4 4.6 0.00016 28.1 8.2 59 50-108 477-548 (592)
309 3ii7_A Kelch-like protein 7; p 88.2 3.1 0.00011 25.5 10.2 64 59-122 101-179 (306)
310 3ii7_A Kelch-like protein 7; p 88.1 3.1 0.00011 25.5 10.3 64 59-122 55-128 (306)
311 3f7f_A Nucleoporin NUP120; nuc 88.1 1.7 5.7E-05 30.9 6.0 37 49-87 222-258 (729)
312 4gq2_M Nucleoporin NUP120; bet 87.5 1.1 3.7E-05 32.8 5.0 32 92-123 237-268 (950)
313 2g8s_A Glucose/sorbosone dehyd 87.2 4.2 0.00014 25.9 7.5 59 49-109 18-88 (353)
314 3s94_A LRP-6, low-density lipo 87.1 5.9 0.0002 27.5 13.3 74 49-122 127-203 (619)
315 2xn4_A Kelch-like protein 2; s 86.8 3.8 0.00013 25.1 8.9 62 59-122 155-230 (302)
316 1tl2_A L10, protein (tachylect 86.7 3.7 0.00013 24.9 7.5 60 52-115 91-157 (236)
317 3ei3_A DNA damage-binding prot 86.5 8.8 0.0003 29.0 12.6 69 49-121 514-591 (1158)
318 2xn4_A Kelch-like protein 2; s 86.4 4 0.00014 25.0 10.0 64 59-122 204-277 (302)
319 2xzh_A Clathrin heavy chain 1; 85.8 5.4 0.00019 25.9 13.1 70 52-125 70-139 (365)
320 1cru_A Protein (soluble quinop 85.5 6.2 0.00021 26.3 9.1 61 49-109 27-99 (454)
321 2vpj_A Kelch-like protein 12; 85.5 4.5 0.00015 24.7 10.4 62 59-122 112-185 (301)
322 1bpo_A Protein (clathrin); cla 85.3 6.8 0.00023 26.5 11.8 71 49-119 259-329 (494)
323 3sre_A PON1, serum paraoxonase 84.9 5.9 0.0002 25.6 7.6 59 50-109 222-285 (355)
324 4asc_A Kelch repeat and BTB do 83.6 5.8 0.0002 24.5 9.8 62 59-122 196-278 (315)
325 3f7f_A Nucleoporin NUP120; nuc 83.4 2.6 9E-05 30.0 5.1 30 92-123 223-252 (729)
326 3ei3_A DNA damage-binding prot 83.3 13 0.00044 28.2 11.4 73 48-120 553-635 (1158)
327 4fhn_B Nucleoporin NUP120; pro 83.2 1.2 4.2E-05 33.2 3.7 31 93-123 240-270 (1139)
328 3sov_A LRP-6, low-density lipo 82.4 7 0.00024 24.5 14.0 73 49-122 166-239 (318)
329 4a9v_A PHOX; hydrolase, beta-p 81.9 11 0.00037 26.3 9.0 60 49-108 476-548 (592)
330 2woz_A Kelch repeat and BTB do 81.2 7.5 0.00026 24.0 8.5 62 59-122 158-232 (318)
331 1bpo_A Protein (clathrin); cla 80.3 11 0.00039 25.5 12.4 70 52-125 69-138 (494)
332 4a0p_A LRP6, LRP-6, low-densit 80.0 13 0.00044 26.0 13.9 74 49-122 80-156 (628)
333 1zgk_A Kelch-like ECH-associat 79.6 8.5 0.00029 23.7 9.7 62 59-122 215-288 (308)
334 3sbq_A Nitrous-oxide reductase 78.8 3 0.0001 29.1 4.1 31 91-121 323-354 (638)
335 3das_A Putative oxidoreductase 78.5 11 0.00037 24.3 9.8 72 49-120 32-115 (347)
336 1xi4_A Clathrin heavy chain; a 78.3 16 0.00056 28.8 7.9 70 52-125 69-138 (1630)
337 2xbg_A YCF48-like protein; pho 78.2 10 0.00035 23.8 11.9 68 49-119 250-320 (327)
338 4asc_A Kelch repeat and BTB do 77.3 10 0.00035 23.4 9.4 64 59-122 148-222 (315)
339 3s94_A LRP-6, low-density lipo 73.9 20 0.00068 25.0 14.0 73 49-121 392-467 (619)
340 1zgk_A Kelch-like ECH-associat 72.7 14 0.00047 22.7 9.4 62 59-122 168-241 (308)
341 3a9g_A Putative uncharacterize 72.2 16 0.00056 23.3 9.8 61 49-109 73-153 (354)
342 2ism_A Putative oxidoreductase 70.0 18 0.00063 23.0 12.3 61 49-109 75-153 (352)
343 3al9_A Plexin-A2; beta-propell 69.3 20 0.00068 24.7 6.2 67 50-116 401-476 (539)
344 4gz8_A Semaphorin-3A; multi-do 68.7 29 0.00098 24.7 7.9 67 50-116 413-495 (667)
345 1xi4_A Clathrin heavy chain; a 66.6 37 0.0012 27.0 7.5 66 49-114 259-324 (1630)
346 2uvk_A YJHT; unknown function, 65.3 22 0.00077 22.2 10.1 53 59-111 65-128 (357)
347 1q47_A Semaphorin 3A; beta pro 64.3 31 0.0011 23.5 8.2 67 50-116 405-487 (495)
348 2xbg_A YCF48-like protein; pho 60.7 28 0.00095 21.7 11.1 65 49-117 163-230 (327)
349 3das_A Putative oxidoreductase 59.8 32 0.0011 22.1 6.2 31 91-121 32-62 (347)
350 3ott_A Two-component system se 59.3 44 0.0015 23.6 8.1 69 50-121 192-260 (758)
351 2woz_A Kelch repeat and BTB do 57.2 31 0.0011 21.2 10.9 64 57-122 54-137 (318)
352 3nvq_A Semaphorin-7A; beta-pro 55.1 52 0.0018 23.1 8.1 56 61-116 381-444 (590)
353 2zwa_A Leucine carboxyl methyl 49.2 68 0.0023 22.7 7.5 64 59-122 451-523 (695)
354 3oky_B Putative uncharacterize 47.0 71 0.0024 22.3 7.3 68 50-117 404-496 (565)
355 1olz_A Semaphorin 4D; developm 43.7 86 0.0029 22.3 8.2 67 50-116 398-477 (663)
356 2wg3_C Hedgehog-interacting pr 43.3 73 0.0025 21.4 7.7 61 49-109 14-91 (463)
357 4a9v_A PHOX; hydrolase, beta-p 40.3 95 0.0033 21.9 5.9 19 49-67 531-549 (592)
358 3ol2_B Plexin-B1; beta-propell 39.9 91 0.0031 21.5 7.1 68 49-116 387-461 (528)
359 4gz8_A Semaphorin-3A; multi-do 36.9 1.1E+02 0.0039 21.8 6.5 28 47-74 468-495 (667)
360 3oky_A Plexin-A2; transmembran 34.5 1.3E+02 0.0044 21.6 7.0 66 51-116 401-475 (681)
361 2g8s_A Glucose/sorbosone dehyd 34.2 90 0.0031 19.8 8.3 65 50-114 272-347 (353)
362 3zwu_A Alkaline phosphatase PH 34.1 1.2E+02 0.0042 21.3 5.6 19 48-66 530-548 (592)
363 2zwa_A Leucine carboxyl methyl 33.7 1.3E+02 0.0043 21.4 8.5 70 54-123 495-579 (695)
364 3qhy_B Beta-lactamase inhibito 31.4 92 0.0032 19.1 7.9 10 69-78 80-89 (282)
365 1cru_A Protein (soluble quinop 28.5 1.3E+02 0.0045 20.0 8.0 54 62-115 371-430 (454)
366 1zso_A Hypothetical protein; s 28.4 87 0.003 17.9 4.1 29 93-121 112-140 (164)
367 3mwp_A Nucleoprotein; structur 25.6 17 0.00059 24.5 0.3 18 4-21 163-180 (577)
368 1q47_A Semaphorin 3A; beta pro 24.6 1.7E+02 0.0059 20.0 6.9 27 48-74 461-487 (495)
369 1ukf_A Avirulence protein AVRP 24.5 1.1E+02 0.0038 18.0 3.4 36 49-84 119-155 (188)
No 1
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.95 E-value=2.9e-26 Score=146.68 Aligned_cols=120 Identities=17% Similarity=0.233 Sum_probs=99.9
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccc----------------------------------------
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTT---------------------------------------- 41 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~---------------------------------------- 41 (125)
++++.|++|++||+.+++++..+. +..+|.++.|.+...
T Consensus 151 as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fsp 229 (365)
T 4h5i_A 151 ASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIA 229 (365)
T ss_dssp EESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEE
T ss_pred EECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcC
Confidence 467789999999999988877765 566777777743100
Q ss_pred ---------------------------------ccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEe-C
Q psy14458 42 ---------------------------------EAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTF-K 87 (125)
Q Consensus 42 ---------------------------------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~-~ 87 (125)
.....+...|++++|+|++++|++|+.|+.|++||+.+++++..+ .
T Consensus 230 dg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~ 309 (365)
T 4h5i_A 230 DDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQ 309 (365)
T ss_dssp TTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETT
T ss_pred CCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecC
Confidence 000134567999999999999999999999999999999998875 6
Q ss_pred CCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 88 PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 88 ~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+|...|++++|+||+++|++++.|++|+||++...
T Consensus 310 gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 310 AHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp SSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred cccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 89999999999999999999999999999999654
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.94 E-value=4.2e-25 Score=139.20 Aligned_cols=120 Identities=21% Similarity=0.318 Sum_probs=108.2
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccc----------------------cccCCCCCeEEEEECC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTE----------------------AGTRQGSPVSALCVDP 58 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~----------------------~~~~~~~~i~~~~~~~ 58 (125)
|++|+.|+.|++||+++++.+..+.+|..+|+++.|.+.... ....|...|.+++|+|
T Consensus 179 lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp 258 (321)
T 3ow8_A 179 LASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCP 258 (321)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECT
T ss_pred EEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECC
Confidence 578999999999999999999999999999999999753211 1135677899999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
++.++++++.|+.|++||+.+++++..+..|...|.+++|+|++..|++++.|++|++||+.
T Consensus 259 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 259 DDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred CCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999963
No 3
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.94 E-value=3.7e-25 Score=140.71 Aligned_cols=122 Identities=21% Similarity=0.319 Sum_probs=103.5
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccc---cc----------------------cCCCCCeEEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTE---AG----------------------TRQGSPVSALC 55 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~~----------------------~~~~~~i~~~~ 55 (125)
|++|+.|+.|++||+.+++++..+.+|...|+++.|.+.... .. ..+...+.+++
T Consensus 142 l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 221 (344)
T 4gqb_B 142 AVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLA 221 (344)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeee
Confidence 589999999999999999999999999999999998653211 11 12345688999
Q ss_pred ECCC-CCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCC-CeEEEeecCCeEEEEeCCCC
Q psy14458 56 VDPS-GRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSA-YYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 56 ~~~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~ 122 (125)
|+|+ +.++++|+.|+.|++||+++++++..+..|...|.+++|+|++ ++|++|+.|++|++||++++
T Consensus 222 ~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~ 290 (344)
T 4gqb_B 222 WHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS 290 (344)
T ss_dssp ECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC
T ss_pred ecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC
Confidence 9996 5788999999999999999999999999999999999999987 58999999999999999875
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.94 E-value=1.1e-24 Score=136.12 Aligned_cols=123 Identities=15% Similarity=0.225 Sum_probs=107.0
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcc----------------------cccccCCCCCeEEEEECC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYT----------------------TEAGTRQGSPVSALCVDP 58 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~----------------------~~~~~~~~~~i~~~~~~~ 58 (125)
|++++.|+.|++||+.+++.+..+..+..+|.++.|.+.. ......|...|.+++|+|
T Consensus 28 l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~ 107 (304)
T 2ynn_A 28 VLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHP 107 (304)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECS
T ss_pred EEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcC
Confidence 5899999999999999999999999999999999885422 122236788999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCC-ceeEEeCCCCCceeEEEEcc-CCCeEEEeecCCeEEEEeCCCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGS-RPLQTFKPHTADVRSIRFSP-SAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+++++++|+.|+.|++||++++ .....+.+|...|.+++|+| ++..+++|+.|++|++||+++..
T Consensus 108 ~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~ 174 (304)
T 2ynn_A 108 TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST 174 (304)
T ss_dssp SSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSS
T ss_pred CCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 9999999999999999999887 45567889999999999999 67899999999999999997653
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.93 E-value=1.3e-24 Score=136.99 Aligned_cols=123 Identities=21% Similarity=0.374 Sum_probs=108.3
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccccc----------------------ccCCCCCeEEEEECC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEA----------------------GTRQGSPVSALCVDP 58 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----------------------~~~~~~~i~~~~~~~ 58 (125)
+++++.|+.|++||+.+++.+..+..+...+.++.|.+..... ...+...+.+++|+|
T Consensus 95 l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~sp 174 (321)
T 3ow8_A 95 AASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSP 174 (321)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECT
T ss_pred EEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECC
Confidence 4789999999999999999988888888888888886532211 124556799999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+++++++++.|+.|++||+++++.+..+..|...|.+++|+|++++|++++.|++|++||++++.
T Consensus 175 dg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~ 239 (321)
T 3ow8_A 175 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN 239 (321)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCC
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999998653
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.93 E-value=2.5e-24 Score=139.49 Aligned_cols=122 Identities=23% Similarity=0.327 Sum_probs=110.4
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccc----------------------ccccCCCCCeEEEEECC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTT----------------------EAGTRQGSPVSALCVDP 58 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~----------------------~~~~~~~~~i~~~~~~~ 58 (125)
|++|+.|++|++||+.+++....+.+|...|.++.|.+... .....|...|.+++|+|
T Consensus 123 l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p 202 (410)
T 1vyh_C 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMP 202 (410)
T ss_dssp EEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECS
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeC
Confidence 58999999999999999999999999999999999975321 11235678899999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
++.++++++.|+.|++||+.+++++..+..|...|.++.++|++.++++++.|++|++||++++
T Consensus 203 ~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~ 266 (410)
T 1vyh_C 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 266 (410)
T ss_dssp SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999765
No 7
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.93 E-value=2.2e-24 Score=136.62 Aligned_cols=118 Identities=24% Similarity=0.361 Sum_probs=104.6
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccc---------------------c---CCCCCeEEEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAG---------------------T---RQGSPVSALCV 56 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---------------------~---~~~~~i~~~~~ 56 (125)
|++|+.|+.|++||++++++...+.+|..+|.++.|++...... . .+...+.+++|
T Consensus 199 l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 278 (340)
T 1got_B 199 FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSF 278 (340)
T ss_dssp EEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred EEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEE
Confidence 57899999999999999999999999999999999975321111 0 12246899999
Q ss_pred CCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEe
Q psy14458 57 DPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTD 118 (125)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~ 118 (125)
+|++.++++|+.|+.|++||..+++.+..+.+|...|.+++|+|++.+|++|+.|++|++||
T Consensus 279 s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 279 SKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999997
No 8
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.93 E-value=8.1e-24 Score=133.09 Aligned_cols=122 Identities=20% Similarity=0.315 Sum_probs=107.8
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccc---------------------ccccCCCCCeEEEEECCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTT---------------------EAGTRQGSPVSALCVDPS 59 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~---------------------~~~~~~~~~i~~~~~~~~ 59 (125)
|++|+.|++|++||+.+++.+..+.+|..+|.++.|++... .....|...+.+++++|.
T Consensus 80 l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~ 159 (319)
T 3frx_A 80 ALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPN 159 (319)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC
T ss_pred EEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccC
Confidence 57999999999999999999999999999999999875321 112356778999999985
Q ss_pred C------CEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 60 G------RLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 60 ~------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
. ..+++++.|+.|++||+++.+....+.+|...|.+++|+|++++|++++.|++|++||++++
T Consensus 160 ~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~ 228 (319)
T 3frx_A 160 EKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAK 228 (319)
T ss_dssp ------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTT
T ss_pred CCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 3 48999999999999999999998899999999999999999999999999999999999875
No 9
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.93 E-value=6.9e-24 Score=135.15 Aligned_cols=118 Identities=24% Similarity=0.367 Sum_probs=104.1
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccc----------------------c--CCCCCeEEEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAG----------------------T--RQGSPVSALCV 56 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----------------------~--~~~~~i~~~~~ 56 (125)
|++|+.|+.|++||+++++++..+..|..+|.++.|++...... . .....+.+++|
T Consensus 213 l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 292 (354)
T 2pbi_B 213 FVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDF 292 (354)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEE
Confidence 57899999999999999999999999999999999975321111 0 12246789999
Q ss_pred CCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEe
Q psy14458 57 DPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTD 118 (125)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~ 118 (125)
+|++.++++|+.|+.|++||+.+++.+..+.+|.+.|.+++|+|++++|++|+.|++|++|+
T Consensus 293 s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 293 SLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred eCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999996
No 10
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.93 E-value=3.2e-24 Score=136.43 Aligned_cols=103 Identities=23% Similarity=0.361 Sum_probs=92.6
Q ss_pred CeeecCCCeEEEEECCCCcceeee----cCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTF----KPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYD 76 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d 76 (125)
|++|+.|++|++||+.+++.+..+ .+|. ..|.+++|+|++++|++|+.|+.|++||
T Consensus 96 l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~--------------------~~V~~v~~spdg~~l~sgs~d~~i~iwd 155 (344)
T 4gqb_B 96 ILVASDSGAVELWELDENETLIVSKFCKYEHD--------------------DIVSTVSVLSSGTQAVSGSKDICIKVWD 155 (344)
T ss_dssp EEEEETTSEEEEEEECTTSSCEEEEEEEECCS--------------------SCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEEECCCEEEEEeccCCCceeEeeccccCCC--------------------CCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 578999999999999988765443 2555 7899999999999999999999999999
Q ss_pred cCCCceeEEeCCCCCceeEEEEccCC-CeEEEeecCCeEEEEeCCCCC
Q psy14458 77 IRGSRPLQTFKPHTADVRSIRFSPSA-YYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 77 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+.+++.+..+.+|.+.|.++.|+|++ .++++++.|++|++||++++.
T Consensus 156 ~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~ 203 (344)
T 4gqb_B 156 LAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPK 203 (344)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSS
T ss_pred CCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccc
Confidence 99999999999999999999999987 478999999999999998764
No 11
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.92 E-value=1.5e-23 Score=131.11 Aligned_cols=123 Identities=20% Similarity=0.293 Sum_probs=105.0
Q ss_pred CeeecCCCeEEEEECCCC-cceeeecCCCCCeEEEEecCcc---cccc---------------------cCCCCCeEEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGS-RPLQTFKPHTADVRSIHLDHYT---TEAG---------------------TRQGSPVSALC 55 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~~---~~~~---------------------~~~~~~i~~~~ 55 (125)
|++|+.|++|++||++++ .....+.+|...|.++.|++.. .... ..+...+..++
T Consensus 112 l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~ 191 (304)
T 2ynn_A 112 VLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVD 191 (304)
T ss_dssp EEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEE
T ss_pred EEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEE
Confidence 589999999999999877 4456788899999999997621 1111 13446788899
Q ss_pred ECC--CCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 56 VDP--SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 56 ~~~--~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
++| ++.++++++.|+.|++||+++++++..+.+|...|.++.|+|++.+|++++.|++|++||++++.
T Consensus 192 ~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~ 261 (304)
T 2ynn_A 192 YYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK 261 (304)
T ss_dssp ECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC
T ss_pred EEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 987 66899999999999999999999999999999999999999999999999999999999998753
No 12
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.92 E-value=8.3e-24 Score=135.76 Aligned_cols=124 Identities=24% Similarity=0.446 Sum_probs=104.5
Q ss_pred CeeecCCCeEEEEECC-CCcceeeecCCCCCeEEEEecCccccccc-----------------------------CCCCC
Q psy14458 1 MVSGHEDSSCVLYDIR-GSRPLQTFKPHTADVRSIHLDHYTTEAGT-----------------------------RQGSP 50 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----------------------------~~~~~ 50 (125)
|++|+.|++|++||++ ..+.+..+.+|..+|.++.|.+....... .+...
T Consensus 221 l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~ 300 (380)
T 3iz6_a 221 FISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPI 300 (380)
T ss_dssp EEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCS
T ss_pred EEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCc
Confidence 5799999999999998 45778888999999999999753211110 11124
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEe----CCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCCC
Q psy14458 51 VSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTF----KPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTMR 124 (125)
Q Consensus 51 i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~ 124 (125)
+.+++|+|++.++++|+.||.|++||..+++.+..+ .+|.+.|.+++|+|++.+|++|+.|++|++|++.+..+
T Consensus 301 v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~~ 378 (380)
T 3iz6_a 301 VTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHRK 378 (380)
T ss_dssp CSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSSS
T ss_pred eEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCcc
Confidence 889999999999999999999999999998887776 57999999999999999999999999999999987643
No 13
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.92 E-value=7e-24 Score=134.33 Aligned_cols=102 Identities=36% Similarity=0.564 Sum_probs=96.3
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
+++++.|+.|++||+.+++.+..+.+|. ..|.+++|+|++.++++|+.|+.|++||++++
T Consensus 157 l~s~s~d~~i~~wd~~~~~~~~~~~~h~--------------------~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~ 216 (340)
T 1got_B 157 IVTSSGDTTCALWDIETGQQTTTFTGHT--------------------GDVMSLSLAPDTRLFVSGACDASAKLWDVREG 216 (340)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCS--------------------SCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred EEEEECCCcEEEEECCCCcEEEEEcCCC--------------------CceEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 4789999999999999999988888887 78899999999999999999999999999999
Q ss_pred ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 81 RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+....+..|...|.+++|+|++.++++++.|++|++||++++
T Consensus 217 ~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~ 258 (340)
T 1got_B 217 MCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD 258 (340)
T ss_dssp SEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred eeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCC
Confidence 999999999999999999999999999999999999999865
No 14
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.92 E-value=1.9e-23 Score=135.33 Aligned_cols=123 Identities=21% Similarity=0.334 Sum_probs=108.9
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccc----------------------ccccCCCCCeEEEEECC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTT----------------------EAGTRQGSPVSALCVDP 58 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~----------------------~~~~~~~~~i~~~~~~~ 58 (125)
|++|+.|++|++||++++.++..+.+|...|..+.+++... .....|...+.+++|+|
T Consensus 207 l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~ 286 (410)
T 1vyh_C 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAP 286 (410)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECC
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcC
Confidence 57999999999999999999999999999999998865321 11235677899999999
Q ss_pred C--------------------CCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEe
Q psy14458 59 S--------------------GRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTD 118 (125)
Q Consensus 59 ~--------------------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~ 118 (125)
+ +.++++|+.|+.|++||+++++++..+.+|...|.++.|+|+++++++++.|++|++||
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd 366 (410)
T 1vyh_C 287 ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366 (410)
T ss_dssp SCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEEC
T ss_pred cccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 6 67899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC
Q psy14458 119 LQGTM 123 (125)
Q Consensus 119 ~~~~~ 123 (125)
++++.
T Consensus 367 ~~~~~ 371 (410)
T 1vyh_C 367 YKNKR 371 (410)
T ss_dssp CTTSC
T ss_pred CCCCc
Confidence 97654
No 15
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.92 E-value=3.8e-23 Score=129.24 Aligned_cols=123 Identities=17% Similarity=0.286 Sum_probs=110.1
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccc----------------------ccccCCCCCeEEEEECC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTT----------------------EAGTRQGSPVSALCVDP 58 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~----------------------~~~~~~~~~i~~~~~~~ 58 (125)
|++++.|+.|++|++.+++....+.+|..+|.++.|.+... .....|...+.+++|+|
T Consensus 38 l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~ 117 (312)
T 4ery_A 38 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP 117 (312)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECS
T ss_pred EEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC
Confidence 57999999999999999998889999999999999975321 11125678899999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+++++++++.|+.|++||+++++.+..+..|...|.++.|+|+++++++++.|+.|++||++++.
T Consensus 118 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~ 182 (312)
T 4ery_A 118 QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 182 (312)
T ss_dssp SSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred CCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999998753
No 16
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.92 E-value=4e-23 Score=130.91 Aligned_cols=121 Identities=24% Similarity=0.333 Sum_probs=104.5
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccc------------------------cCCCCCeEEEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAG------------------------TRQGSPVSALCV 56 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~------------------------~~~~~~i~~~~~ 56 (125)
|++|+.|++|++||+++++.+..+.+|..+|.++.|++...... ..+...+.+++|
T Consensus 91 l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~ 170 (343)
T 2xzm_R 91 AISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRY 170 (343)
T ss_dssp EEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEE
T ss_pred EEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeee
Confidence 47999999999999999999999999999999999975321111 146678999999
Q ss_pred CCCC----------CEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 57 DPSG----------RLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 57 ~~~~----------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+|++ .++++++.|+.|++|| ...+....+..|...|.+++|+|++++|++++.|+.|++||+++.
T Consensus 171 ~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~ 245 (343)
T 2xzm_R 171 SPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNL 245 (343)
T ss_dssp CCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCC
T ss_pred ccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 9986 7899999999999999 456667778899999999999999999999999999999999543
No 17
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.92 E-value=2.9e-23 Score=132.42 Aligned_cols=122 Identities=17% Similarity=0.244 Sum_probs=105.6
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccc--c-----------------------cccCCCCCeEEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTT--E-----------------------AGTRQGSPVSALC 55 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~--~-----------------------~~~~~~~~i~~~~ 55 (125)
|++|+.|+.|++||+.+++.+..+.+|...|+++.|.+... . ....+...+.+++
T Consensus 154 l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~ 233 (357)
T 4g56_B 154 AVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVT 233 (357)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchh
Confidence 57999999999999999999999999999999999864221 0 0013445689999
Q ss_pred ECCCC-CEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCC-CeEEEeecCCeEEEEeCCCC
Q psy14458 56 VDPSG-RLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSA-YYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 56 ~~~~~-~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~ 122 (125)
|+|++ .++++|+.|+.|++||+++++.+..+..|...|.+++|+|++ ++|++++.|++|++||++++
T Consensus 234 ~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~ 302 (357)
T 4g56_B 234 WHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS 302 (357)
T ss_dssp ECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC
T ss_pred hhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC
Confidence 99975 788999999999999999999999999999999999999987 68999999999999999875
No 18
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.91 E-value=1.6e-23 Score=133.58 Aligned_cols=101 Identities=22% Similarity=0.323 Sum_probs=90.4
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCC-CEEEEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSG-RLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~d~~~ 79 (125)
|++|+.|+.|++||+++++++..+.++. ..|++++|+|++ .+|++++.|+.|++||+.+
T Consensus 242 la~g~~d~~i~~wd~~~~~~~~~~~~~~--------------------~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~ 301 (357)
T 4g56_B 242 FACGDETGNVSLVNIKNPDSAQTSAVHS--------------------QNITGLAYSYHSSPFLASISEDCTVAVLDADF 301 (357)
T ss_dssp EEEEESSSCEEEEESSCGGGCEEECCCS--------------------SCEEEEEECSSSSCCEEEEETTSCEEEECTTS
T ss_pred EEEeecccceeEEECCCCcEeEEEeccc--------------------eeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC
Confidence 4789999999999999999998888887 788999999987 6799999999999999999
Q ss_pred CceeEEeCCCCCceeEEEEcc-CCCeEEEeecCCeEEEEeCCCC
Q psy14458 80 SRPLQTFKPHTADVRSIRFSP-SAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 80 ~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
++.+..+ +|.+.|++++|+| ++.+|++++.|++|++|++.+.
T Consensus 302 ~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 302 SEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp CEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred CcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 8877655 6999999999999 8999999999999999999754
No 19
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.91 E-value=1e-22 Score=126.93 Aligned_cols=122 Identities=17% Similarity=0.257 Sum_probs=101.4
Q ss_pred CeeecCCCeEEEEECCCCc--ceeeecCCCCCeEEEEecCcc----c----------------------ccccCCCCCeE
Q psy14458 1 MVSGHEDSSCVLYDIRGSR--PLQTFKPHTADVRSIHLDHYT----T----------------------EAGTRQGSPVS 52 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~--~~~~~~~~~~~i~~~~~~~~~----~----------------------~~~~~~~~~i~ 52 (125)
|++|+.|++|++||+.+++ .+..+..|...|.++.|.+.. + .....|...+.
T Consensus 70 l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~ 149 (297)
T 2pm7_B 70 LASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVN 149 (297)
T ss_dssp EEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEE
T ss_pred EEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccc
Confidence 5899999999999998774 556677889999999997531 0 01124567899
Q ss_pred EEEECCC-------------CCEEEEEeCCCcEEEEEcCCCc----eeEEeCCCCCceeEEEEccCC---CeEEEeecCC
Q psy14458 53 ALCVDPS-------------GRLMVSGHEDSSCVLYDIRGSR----PLQTFKPHTADVRSIRFSPSA---YYLLTGGYDN 112 (125)
Q Consensus 53 ~~~~~~~-------------~~~~~~~~~~~~i~~~d~~~~~----~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~d~ 112 (125)
+++|+|+ +.+|++|+.|+.|++||+++++ ....+.+|...|.+++|+|++ .+|++++.|+
T Consensus 150 ~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~ 229 (297)
T 2pm7_B 150 SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDR 229 (297)
T ss_dssp EEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred eEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCC
Confidence 9999997 4689999999999999998765 566788999999999999984 8999999999
Q ss_pred eEEEEeCCCC
Q psy14458 113 KLVLTDLQGT 122 (125)
Q Consensus 113 ~i~~~~~~~~ 122 (125)
+|++||+++.
T Consensus 230 ~v~iWd~~~~ 239 (297)
T 2pm7_B 230 TCIIWTQDNE 239 (297)
T ss_dssp CEEEEEESST
T ss_pred cEEEEEeCCC
Confidence 9999998764
No 20
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.91 E-value=4.6e-23 Score=131.36 Aligned_cols=102 Identities=31% Similarity=0.586 Sum_probs=94.5
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECC--CCCEEEEEeCCCcEEEEEcC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDP--SGRLMVSGHEDSSCVLYDIR 78 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~i~~~d~~ 78 (125)
|++++.|++|++||+.+++.+..+.+|. ..+.+++++| +++++++|+.|+.|++||++
T Consensus 169 l~t~s~D~~v~lwd~~~~~~~~~~~~h~--------------------~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~ 228 (354)
T 2pbi_B 169 ILTASGDGTCALWDVESGQLLQSFHGHG--------------------ADVLCLDLAPSETGNTFVSGGCDKKAMVWDMR 228 (354)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCS--------------------SCEEEEEECCCSSCCEEEEEETTSCEEEEETT
T ss_pred EEEEeCCCcEEEEeCCCCeEEEEEcCCC--------------------CCeEEEEEEeCCCCCEEEEEeCCCeEEEEECC
Confidence 5789999999999999999998888887 6778888887 46899999999999999999
Q ss_pred CCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 79 GSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 79 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+++.+..+..|...|.+++|+|++.++++++.|++|++||+++.
T Consensus 229 ~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~ 272 (354)
T 2pbi_B 229 SGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRAD 272 (354)
T ss_dssp TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred CCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 99999999999999999999999999999999999999999864
No 21
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.91 E-value=2.6e-23 Score=131.80 Aligned_cols=101 Identities=24% Similarity=0.465 Sum_probs=90.4
Q ss_pred CeeecCCCeEEEEECCCCc-------ceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSR-------PLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCV 73 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~ 73 (125)
|++|+.|++|++||+...+ +...+.+|. ..|.+++|+|++.++++++.|+.|+
T Consensus 42 l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~--------------------~~V~~~~~~~~~~~l~s~s~D~~v~ 101 (343)
T 2xzm_R 42 LISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHN--------------------HFVSDLALSQENCFAISSSWDKTLR 101 (343)
T ss_dssp EEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCS--------------------SCEEEEEECSSTTEEEEEETTSEEE
T ss_pred EEEEcCCCEEEEEECCcCCcccccccccchhccCC--------------------CceEEEEECCCCCEEEEEcCCCcEE
Confidence 5899999999999987543 334455555 7899999999999999999999999
Q ss_pred EEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 74 LYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 74 ~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
+||+++++.+..+.+|...|.+++|+|+++++++++.|++|++||+..
T Consensus 102 lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~ 149 (343)
T 2xzm_R 102 LWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG 149 (343)
T ss_dssp EEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS
T ss_pred EEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC
Confidence 999999999999999999999999999999999999999999999863
No 22
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.91 E-value=9.5e-23 Score=139.17 Aligned_cols=123 Identities=24% Similarity=0.330 Sum_probs=108.7
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccccc-------------------------ccCCCCCeEEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEA-------------------------GTRQGSPVSALC 55 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-------------------------~~~~~~~i~~~~ 55 (125)
|++|+.|+.|++||+.+++....+.+|..+|.++.|++..... ...|...|.+++
T Consensus 445 l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~ 524 (694)
T 3dm0_A 445 ALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVR 524 (694)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEE
T ss_pred EEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEE
Confidence 5799999999999999999999999999999999986532110 124667799999
Q ss_pred ECCCC--CEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 56 VDPSG--RLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 56 ~~~~~--~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
|+|++ ..+++++.|+.|++||+++++....+..|...|.+++|+|+++++++++.|++|++||++++.
T Consensus 525 ~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~ 594 (694)
T 3dm0_A 525 FSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK 594 (694)
T ss_dssp ECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTE
T ss_pred EeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc
Confidence 99986 689999999999999999999999999999999999999999999999999999999998753
No 23
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.91 E-value=1.7e-23 Score=132.13 Aligned_cols=120 Identities=10% Similarity=0.134 Sum_probs=85.2
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCC---CeEEEEecCcccccc------------------------cCCCCCeEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTA---DVRSIHLDHYTTEAG------------------------TRQGSPVSA 53 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~---~i~~~~~~~~~~~~~------------------------~~~~~~i~~ 53 (125)
|++|+.|++|++||+.+++++..+.++.. .+.++.|.+...... ...+..+..
T Consensus 196 LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v 275 (356)
T 2w18_A 196 LLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGV 275 (356)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEE
T ss_pred EEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEE
Confidence 47899999999999999999999875432 444444443221110 001111111
Q ss_pred EEEC-CC------------CCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCcee-EEEEccCCCeEEEeecCCeEEEEeC
Q psy14458 54 LCVD-PS------------GRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVR-SIRFSPSAYYLLTGGYDNKLVLTDL 119 (125)
Q Consensus 54 ~~~~-~~------------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~d~~i~~~~~ 119 (125)
+.+. |+ +.++++++.|++|++||+.+++.+..+.+|...+. +++|+|||++|++|+.|++|++||+
T Consensus 276 ~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 276 MLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 1111 32 34689999999999999999999999998887665 5899999999999999999999996
Q ss_pred C
Q psy14458 120 Q 120 (125)
Q Consensus 120 ~ 120 (125)
.
T Consensus 356 ~ 356 (356)
T 2w18_A 356 S 356 (356)
T ss_dssp C
T ss_pred C
Confidence 3
No 24
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.3e-22 Score=128.16 Aligned_cols=122 Identities=16% Similarity=0.283 Sum_probs=97.9
Q ss_pred CeeecCCCeEEEEECCCC--cceeee-cC-CCCCeEEEEecCccc-----------------------------ccccCC
Q psy14458 1 MVSGHEDSSCVLYDIRGS--RPLQTF-KP-HTADVRSIHLDHYTT-----------------------------EAGTRQ 47 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~--~~~~~~-~~-~~~~i~~~~~~~~~~-----------------------------~~~~~~ 47 (125)
|++|+.|++|++||+..+ +....+ .. |..+|+++.|++... .....|
T Consensus 27 las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h 106 (330)
T 2hes_X 27 LATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGH 106 (330)
T ss_dssp EEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC--
T ss_pred EEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCC
Confidence 589999999999999875 344455 34 889999999865221 012356
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC----CceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 48 GSPVSALCVDPSGRLMVSGHEDSSCVLYDIRG----SRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 48 ~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
...|.+++|+|++++|++++.|+.|++||+.. .+.+..+..|...|.+++|+|++.+|++++.|++|++||++++
T Consensus 107 ~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~ 185 (330)
T 2hes_X 107 ENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDD 185 (330)
T ss_dssp --CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETT
T ss_pred CCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 78899999999999999999999999999953 2456778899999999999999999999999999999997643
No 25
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.91 E-value=1.6e-22 Score=130.25 Aligned_cols=122 Identities=20% Similarity=0.335 Sum_probs=103.6
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccc---------------------cCCCCCeEEEEECC-
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAG---------------------TRQGSPVSALCVDP- 58 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---------------------~~~~~~i~~~~~~~- 58 (125)
|++|+.|+.|++||+.+++.+..+.+|..+|.++.|.+...... ..+...+.+++++|
T Consensus 138 l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~ 217 (393)
T 1erj_A 138 LATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPG 217 (393)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECST
T ss_pred EEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECC
Confidence 57899999999999999999999999999999999975321111 13446789999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEe-------CCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGSRPLQTF-------KPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
++.++++++.|+.|++||+++++.+..+ .+|...|.+++|+|+++++++++.|+.|++||+++.
T Consensus 218 ~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~ 288 (393)
T 1erj_A 218 DGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNA 288 (393)
T ss_dssp TCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 8899999999999999999998877666 468899999999999999999999999999999764
No 26
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.91 E-value=3.1e-23 Score=130.45 Aligned_cols=101 Identities=23% Similarity=0.439 Sum_probs=91.3
Q ss_pred CeeecCCCeEEEEECCCC-----cceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGS-----RPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLY 75 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~ 75 (125)
|++|+.|++|++|++... .++..+.+|. ..|.+++|+|++.++++++.|+.|++|
T Consensus 33 l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~--------------------~~v~~~~~s~dg~~l~s~s~D~~v~~w 92 (319)
T 3frx_A 33 LLSASRDKTLISWKLTGDDQKFGVPVRSFKGHS--------------------HIVQDCTLTADGAYALSASWDKTLRLW 92 (319)
T ss_dssp EEEEETTSEEEEEEEEEETTEEEEEEEEEECCS--------------------SCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred EEEecCCccEEEecCCCCCccccccceEEeCCc--------------------ccEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 589999999999998642 2345566666 788999999999999999999999999
Q ss_pred EcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 76 DIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 76 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
|+.+++.+..+.+|...|.+++|+|++.++++++.|++|++||++.
T Consensus 93 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~ 138 (319)
T 3frx_A 93 DVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG 138 (319)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS
T ss_pred ECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 9999999999999999999999999999999999999999999864
No 27
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.91 E-value=1.7e-22 Score=129.70 Aligned_cols=122 Identities=25% Similarity=0.460 Sum_probs=102.3
Q ss_pred CeeecCCCeEEEEECCCCcceeee-----cCCCCCeEEEEecCcc------------------------cccccCCCCCe
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTF-----KPHTADVRSIHLDHYT------------------------TEAGTRQGSPV 51 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~-----~~~~~~i~~~~~~~~~------------------------~~~~~~~~~~i 51 (125)
|++|+.|++|++||+.+++.+..+ .+|...|.++.+++.. ......|...|
T Consensus 173 l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v 252 (380)
T 3iz6_a 173 LITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDI 252 (380)
T ss_dssp EEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCC
T ss_pred EEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCe
Confidence 579999999999999999887766 5688889988875311 11123577889
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCC-------CceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 52 SALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHT-------ADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
.+++|+|++.++++++.|+.|++||+++++.+..+..+. ..|.+++|+|+++++++|+.|+.|++||+.++
T Consensus 253 ~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~ 330 (380)
T 3iz6_a 253 NSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLA 330 (380)
T ss_dssp CEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTC
T ss_pred EEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCC
Confidence 999999999999999999999999999998888776432 24889999999999999999999999998654
No 28
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.91 E-value=1.6e-22 Score=136.58 Aligned_cols=122 Identities=21% Similarity=0.305 Sum_probs=105.5
Q ss_pred CeeecCCCeEEEEECCCCcc--eeeecCCCCCeEEEEecCcccc------------------------cccCCCCCeEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRP--LQTFKPHTADVRSIHLDHYTTE------------------------AGTRQGSPVSAL 54 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~------------------------~~~~~~~~i~~~ 54 (125)
|++|+.|++|++||+.+++. ...+.+|..+|.++.|++.... ....|...|.++
T Consensus 74 lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v 153 (611)
T 1nr0_A 74 CASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSV 153 (611)
T ss_dssp EEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEE
T ss_pred EEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEE
Confidence 58999999999999975543 4567789999999999764321 123577889999
Q ss_pred EECCCCC-EEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 55 CVDPSGR-LMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 55 ~~~~~~~-~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+|+|++. .+++++.|+.|++||..+++....+.+|...|.+++|+|+++++++++.|++|++||++++
T Consensus 154 ~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g 222 (611)
T 1nr0_A 154 DFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDG 222 (611)
T ss_dssp EECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred EECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCC
Confidence 9999986 6999999999999999988888899999999999999999999999999999999998765
No 29
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.91 E-value=1.2e-22 Score=128.87 Aligned_cols=120 Identities=19% Similarity=0.238 Sum_probs=102.6
Q ss_pred CeeecCCCeEEEEECCCCc--ceeeecCCCCCeEEEEecCccc-------------------------ccccCCCCCeEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSR--PLQTFKPHTADVRSIHLDHYTT-------------------------EAGTRQGSPVSA 53 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~-------------------------~~~~~~~~~i~~ 53 (125)
|++|+.|+.|++||+..+. ++..+.+|..+|.++.|.+... .....|...|.+
T Consensus 76 l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~ 155 (345)
T 3fm0_A 76 LASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKH 155 (345)
T ss_dssp EEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEE
T ss_pred EEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEE
Confidence 5899999999999987763 5677889999999999975221 112356778999
Q ss_pred EEECCCCCEEEEEeCCCcEEEEEcCCCc--eeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 54 LCVDPSGRLMVSGHEDSSCVLYDIRGSR--PLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
++|+|++.++++++.|+.|++||..+++ ....+.+|...|.+++|+|++++|++++.|++|++|+..
T Consensus 156 ~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 156 VVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp EEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred EEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccc
Confidence 9999999999999999999999998875 456788999999999999999999999999999999963
No 30
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.90 E-value=7.8e-23 Score=138.07 Aligned_cols=102 Identities=22% Similarity=0.368 Sum_probs=94.6
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
|++|+.|++|++||..+++....+.+|. ..|.+++|+|+++++++++.|+.|++||..++
T Consensus 163 l~s~s~D~~v~lwd~~~~~~~~~l~~H~--------------------~~V~~v~fspdg~~las~s~D~~i~lwd~~~g 222 (611)
T 1nr0_A 163 IISGSDDNTVAIFEGPPFKFKSTFGEHT--------------------KFVHSVRYNPDGSLFASTGGDGTIVLYNGVDG 222 (611)
T ss_dssp EEEEETTSCEEEEETTTBEEEEEECCCS--------------------SCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred EEEEeCCCeEEEEECCCCeEeeeecccc--------------------CceEEEEECCCCCEEEEEECCCcEEEEECCCC
Confidence 5799999999999998888888888887 78899999999999999999999999999999
Q ss_pred ceeEEeC-------CCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 81 RPLQTFK-------PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 81 ~~~~~~~-------~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+....+. +|.+.|.+++|+|++++|++++.|++|++||++++
T Consensus 223 ~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~ 271 (611)
T 1nr0_A 223 TKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATL 271 (611)
T ss_dssp CEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred cEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCC
Confidence 8888774 69999999999999999999999999999999865
No 31
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.90 E-value=1.5e-22 Score=128.97 Aligned_cols=99 Identities=13% Similarity=0.207 Sum_probs=86.3
Q ss_pred ecCCCeEEEEECCCCcc----------------eeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEe
Q psy14458 4 GHEDSSCVLYDIRGSRP----------------LQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGH 67 (125)
Q Consensus 4 ~~~d~~i~v~d~~~~~~----------------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 67 (125)
|+.|+.|++||+.+++. +..+.+|. ..|.+++|+|++.++++++
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~--------------------~~v~~~~~s~~g~~l~s~s 214 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHT--------------------NPIKMVRLNRKSDMVATCS 214 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCS--------------------SCEEEEEECTTSSEEEEEE
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccC--------------------CceEEEEECCCCCEEEEEe
Confidence 68899999999887651 34444444 8899999999999999999
Q ss_pred CCCc-EEEEEcCCCceeEEeC-C-CCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 68 EDSS-CVLYDIRGSRPLQTFK-P-HTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 68 ~~~~-i~~~d~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
.|++ |++||+++++.+..+. + |...|.+++|+|+++++++++.|++|++||++..
T Consensus 215 ~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 215 QDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp TTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred CCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 9998 9999999999999998 5 9999999999999999999999999999999764
No 32
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.90 E-value=2.1e-22 Score=127.83 Aligned_cols=122 Identities=19% Similarity=0.304 Sum_probs=101.9
Q ss_pred CeeecCCCeEEEEECCCCccee---eecCCCCCeEEEEecCccc------------------------ccccCCCCCeEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQ---TFKPHTADVRSIHLDHYTT------------------------EAGTRQGSPVSA 53 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~---~~~~~~~~i~~~~~~~~~~------------------------~~~~~~~~~i~~ 53 (125)
|++|+.|++|++||+..++... ...+|...|+++.|++... .....|...|.+
T Consensus 31 las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~ 110 (345)
T 3fm0_A 31 LASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKS 110 (345)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEE
T ss_pred EEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceE
Confidence 5899999999999998775432 2357899999999975221 112357789999
Q ss_pred EEECCCCCEEEEEeCCCcEEEEEcCCCc---eeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 54 LCVDPSGRLMVSGHEDSSCVLYDIRGSR---PLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
++|+|++++|++++.|+.|++||+.++. .+..+..|...|.+++|+|++.++++++.|++|++||++++
T Consensus 111 v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~ 182 (345)
T 3fm0_A 111 VAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEED 182 (345)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETT
T ss_pred EEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCC
Confidence 9999999999999999999999998753 45667789999999999999999999999999999998654
No 33
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.90 E-value=2e-22 Score=126.35 Aligned_cols=123 Identities=18% Similarity=0.216 Sum_probs=102.1
Q ss_pred CeeecCCCeEEEEECCCCcceeeec-------------CCCCCeEEEEecCcc---------------------------
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFK-------------PHTADVRSIHLDHYT--------------------------- 40 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~-------------~~~~~i~~~~~~~~~--------------------------- 40 (125)
|++++.|+.|++||+++++.+..+. .+...+.++.|.+..
T Consensus 127 l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 206 (351)
T 3f3f_A 127 LACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHV 206 (351)
T ss_dssp EEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEE
T ss_pred EEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceee
Confidence 5789999999999998876544332 466778888886530
Q ss_pred cccccCCCCCeEEEEECCCC----CEEEEEeCCCcEEEEEcCCC------------------------------------
Q psy14458 41 TEAGTRQGSPVSALCVDPSG----RLMVSGHEDSSCVLYDIRGS------------------------------------ 80 (125)
Q Consensus 41 ~~~~~~~~~~i~~~~~~~~~----~~~~~~~~~~~i~~~d~~~~------------------------------------ 80 (125)
......|...|.+++|+|++ .++++++.||.|++||++.+
T Consensus 207 ~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (351)
T 3f3f_A 207 AAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEE 286 (351)
T ss_dssp EEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-----------------------------------
T ss_pred eeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccce
Confidence 22233577899999999998 89999999999999999864
Q ss_pred ----------ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 81 ----------RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 81 ----------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+.+..+..|...|.+++|+|++++|++++.|+.|++|++.++.
T Consensus 287 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 287 KAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp ----CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred eeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCc
Confidence 5667778899999999999999999999999999999998754
No 34
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.90 E-value=2.2e-22 Score=127.48 Aligned_cols=103 Identities=12% Similarity=0.230 Sum_probs=90.3
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
|++++.|+.|++||+++++....+..+. ...+.+++|+|++.++++|+.||.|++||++++
T Consensus 142 l~s~s~dg~i~~wd~~~~~~~~~~~~~~-------------------~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~ 202 (343)
T 3lrv_A 142 FIWADNRGTIGFQSYEDDSQYIVHSAKS-------------------DVEYSSGVLHKDSLLLALYSPDGILDVYNLSSP 202 (343)
T ss_dssp EEEEETTCCEEEEESSSSCEEEEECCCS-------------------SCCCCEEEECTTSCEEEEECTTSCEEEEESSCT
T ss_pred EEEEeCCCcEEEEECCCCcEEEEEecCC-------------------CCceEEEEECCCCCEEEEEcCCCEEEEEECCCC
Confidence 4789999999999999888866554332 157899999999999999999999999999999
Q ss_pred cee-EEeCC-CCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 81 RPL-QTFKP-HTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 81 ~~~-~~~~~-~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+.+ ..+.. |...|.+++|+|++.++++++ |+.|++||+++..
T Consensus 203 ~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 203 DQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDV 246 (343)
T ss_dssp TSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSST
T ss_pred CCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCC
Confidence 877 77887 999999999999999999999 5599999998764
No 35
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.90 E-value=1.1e-21 Score=122.58 Aligned_cols=122 Identities=27% Similarity=0.446 Sum_probs=106.2
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccc----------------------ccccCCCCCeEEEEECC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTT----------------------EAGTRQGSPVSALCVDP 58 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~----------------------~~~~~~~~~i~~~~~~~ 58 (125)
|++++.|+.|++||+.+++.+..+.+|...|.++.|++... .....+...+.+++|+|
T Consensus 80 l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 159 (312)
T 4ery_A 80 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 159 (312)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT
T ss_pred EEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcC
Confidence 57899999999999999999999999999999999875321 11125667899999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEeC-CCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGSRPLQTFK-PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
++.++++++.|+.|++||+++++.+..+. .+...+..++|+|+++++++++.|+.|++||++++
T Consensus 160 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 224 (312)
T 4ery_A 160 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 224 (312)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTT
T ss_pred CCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 99999999999999999999988877764 45678999999999999999999999999999865
No 36
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.90 E-value=3.2e-22 Score=126.31 Aligned_cols=121 Identities=17% Similarity=0.247 Sum_probs=97.7
Q ss_pred CeeecCCCeEEEEECCC-------CcceeeecCCCCCeEEEEecCccc--------------------------ccccCC
Q psy14458 1 MVSGHEDSSCVLYDIRG-------SRPLQTFKPHTADVRSIHLDHYTT--------------------------EAGTRQ 47 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~-------~~~~~~~~~~~~~i~~~~~~~~~~--------------------------~~~~~~ 47 (125)
|++|+.|+.|++||+.. .+.+..+.+|..+|.++.|++... .....|
T Consensus 73 las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h 152 (330)
T 2hes_X 73 LAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEH 152 (330)
T ss_dssp EEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCC
T ss_pred EEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccC
Confidence 57999999999999853 345667888999999999865211 112356
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC--ceeEEeCCCCCceeEEEEccC--CCeEEEeecCCeEEEEeCCC
Q psy14458 48 GSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS--RPLQTFKPHTADVRSIRFSPS--AYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 48 ~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~d~~i~~~~~~~ 121 (125)
...|.+++|+|++.+|++++.|+.|++||..++ +++..+.+|...|.+++|+|+ +..+++++.|++|++||+++
T Consensus 153 ~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 153 SQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEE
T ss_pred CCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecC
Confidence 788999999999999999999999999998876 577888999999999999998 67899999999999999864
No 37
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.90 E-value=2.9e-22 Score=133.70 Aligned_cols=116 Identities=23% Similarity=0.406 Sum_probs=101.8
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccc---------------------ccccCCCCCeEEEEECCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTT---------------------EAGTRQGSPVSALCVDPS 59 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~---------------------~~~~~~~~~i~~~~~~~~ 59 (125)
|++++.|+.|++||+ +++.+..+.+|..+|+++.|.+... .....|...|++++|+|+
T Consensus 441 l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~d 519 (577)
T 2ymu_A 441 IASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPD 519 (577)
T ss_dssp EEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTT
T ss_pred EEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCCCEEEEEEcCC
Confidence 578999999999996 5677788888999999999875321 112357789999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEe
Q psy14458 60 GRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTD 118 (125)
Q Consensus 60 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~ 118 (125)
+++|++++.|+.|++||. +++.+..+.+|...|.+++|+||+++|++++.|++|++||
T Consensus 520 g~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 520 GQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp SSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 999999999999999994 6788888999999999999999999999999999999997
No 38
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.90 E-value=2e-22 Score=130.02 Aligned_cols=102 Identities=18% Similarity=0.246 Sum_probs=95.4
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
|++|+.|+.|++||+.+++....+..|. ..|.+++|+|++.++++++.|+.|++||+.++
T Consensus 112 l~~~~~dg~i~iwd~~~~~~~~~~~~h~--------------------~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~ 171 (420)
T 3vl1_A 112 FILGTTEGDIKVLDSNFNLQREIDQAHV--------------------SEITKLKFFPSGEALISSSQDMQLKIWSVKDG 171 (420)
T ss_dssp EEEEETTSCEEEECTTSCEEEEETTSSS--------------------SCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred EEEEECCCCEEEEeCCCcceeeeccccc--------------------CccEEEEECCCCCEEEEEeCCCeEEEEeCCCC
Confidence 5789999999999999888877777777 78899999999999999999999999999999
Q ss_pred ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 81 RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+.+..+..|...|.+++|+|++.++++++.|+.|++||++++
T Consensus 172 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~ 213 (420)
T 3vl1_A 172 SNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTG 213 (420)
T ss_dssp CCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT
T ss_pred cCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCC
Confidence 999999999999999999999999999999999999999865
No 39
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.89 E-value=1.2e-21 Score=123.11 Aligned_cols=123 Identities=17% Similarity=0.261 Sum_probs=99.7
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccc---------------------cCCCCCeEEEEECCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAG---------------------TRQGSPVSALCVDPS 59 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---------------------~~~~~~i~~~~~~~~ 59 (125)
+++++.|+.|++||+++++.+..+.+|..+|+++.|++...... ......+.+++++|+
T Consensus 188 ~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~ 267 (340)
T 4aow_A 188 IVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPN 267 (340)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSS
T ss_pred EEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCC
Confidence 36899999999999999999999999999999999976432111 134467899999998
Q ss_pred CCEEEEEeCCCcEEEEEcCCCceeEEeC---------CCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCCC
Q psy14458 60 GRLMVSGHEDSSCVLYDIRGSRPLQTFK---------PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTMR 124 (125)
Q Consensus 60 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~ 124 (125)
+.++ +++.|+.|++||++++..+..+. .|...|.+++|+|++++|++|+.|+.|++||+++|.+
T Consensus 268 ~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGtr 340 (340)
T 4aow_A 268 RYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR 340 (340)
T ss_dssp SSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC---
T ss_pred Ccee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcCC
Confidence 7654 55679999999998876655443 5788999999999999999999999999999998864
No 40
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.89 E-value=2.2e-21 Score=120.94 Aligned_cols=122 Identities=21% Similarity=0.300 Sum_probs=99.0
Q ss_pred CeeecCCCeEEEEECCCCcc----eeeecCCCCCeEEEEecCccc------------------------ccccCCCCCeE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRP----LQTFKPHTADVRSIHLDHYTT------------------------EAGTRQGSPVS 52 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~~~~~i~ 52 (125)
|++++.|+.|++||+++++. ......+...|..+.+.+... .....+...+.
T Consensus 165 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~ 244 (318)
T 4ggc_A 165 LASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVC 244 (318)
T ss_dssp EEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEE
T ss_pred EEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeee
Confidence 57899999999999987653 233445677777777654221 11123446788
Q ss_pred EEEECCCCCEEEEEe--CCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 53 ALCVDPSGRLMVSGH--EDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 53 ~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
.++++|.+..+++++ .|+.|++||+.+++++..+.+|.+.|++++|+|++++|++|+.|++|++||+...
T Consensus 245 ~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 245 SILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred eeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 999999998877654 8999999999999999999999999999999999999999999999999999754
No 41
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.89 E-value=8.6e-22 Score=126.92 Aligned_cols=102 Identities=20% Similarity=0.386 Sum_probs=92.5
Q ss_pred CeeecCCCeEEEEECCCC-------cceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCC-CEEEEEeCCCcE
Q psy14458 1 MVSGHEDSSCVLYDIRGS-------RPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSG-RLMVSGHEDSSC 72 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i 72 (125)
|++|+.|+.|++||+.++ +++..+.+|. ..|.+++|+|++ .++++++.|+.|
T Consensus 97 l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~--------------------~~v~~~~~~p~~~~~l~s~~~dg~i 156 (402)
T 2aq5_A 97 IASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHT--------------------KRVGIVAWHPTAQNVLLSAGCDNVI 156 (402)
T ss_dssp EEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCS--------------------SCEEEEEECSSBTTEEEEEETTSCE
T ss_pred EEEEeCCCeEEEEEccCCCCccccCCceEEecCCC--------------------CeEEEEEECcCCCCEEEEEcCCCEE
Confidence 589999999999999887 4455666666 789999999998 799999999999
Q ss_pred EEEEcCCCceeEEe--CCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 73 VLYDIRGSRPLQTF--KPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 73 ~~~d~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
++||+.+++.+..+ ..|...|.+++|+|++.++++++.|+.|++||++++
T Consensus 157 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 208 (402)
T 2aq5_A 157 LVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKG 208 (402)
T ss_dssp EEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTT
T ss_pred EEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCC
Confidence 99999999999888 789999999999999999999999999999999875
No 42
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.89 E-value=4.4e-22 Score=126.97 Aligned_cols=123 Identities=16% Similarity=0.209 Sum_probs=97.2
Q ss_pred CeeecCCCeEEEEECCCCc---ceeeecCCCCCeEEEEecCcc-------------------------cccccC-CCCCe
Q psy14458 1 MVSGHEDSSCVLYDIRGSR---PLQTFKPHTADVRSIHLDHYT-------------------------TEAGTR-QGSPV 51 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~---~~~~~~~~~~~i~~~~~~~~~-------------------------~~~~~~-~~~~i 51 (125)
|++++.|+.|++||+.+++ ....+..|..+|.++.|.+.. ...... |...|
T Consensus 70 l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v 149 (377)
T 3dwl_C 70 IVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTI 149 (377)
T ss_dssp EEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCE
T ss_pred EEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCe
Confidence 5799999999999999876 566777899999999986421 111123 77899
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEEcC------------------CCceeEEeCCCCCceeEEEEccCCCeEEEeecCCe
Q psy14458 52 SALCVDPSGRLMVSGHEDSSCVLYDIR------------------GSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNK 113 (125)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~i~~~d~~------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~ 113 (125)
.+++|+|++.++++++.|+.|++||+. .++.+..+ .|...|.+++|+|+++++++++.|+.
T Consensus 150 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~ 228 (377)
T 3dwl_C 150 LSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSS 228 (377)
T ss_dssp EEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTE
T ss_pred EEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCc
Confidence 999999999999999999999999985 24455556 79999999999999999999999999
Q ss_pred EEEEeCCCCCC
Q psy14458 114 LVLTDLQGTMR 124 (125)
Q Consensus 114 i~~~~~~~~~~ 124 (125)
|++||++++..
T Consensus 229 i~iwd~~~~~~ 239 (377)
T 3dwl_C 229 VTIAYPSAPEQ 239 (377)
T ss_dssp EC-CEECSTTS
T ss_pred EEEEECCCCCC
Confidence 99999987753
No 43
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.89 E-value=1.5e-21 Score=123.57 Aligned_cols=102 Identities=16% Similarity=0.258 Sum_probs=94.7
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECC-CCCEEEEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDP-SGRLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~i~~~d~~~ 79 (125)
|++|+.|+.|++||+.+++.+..+.+|. ..|.+++|+| ++.++++++.||.|++||+++
T Consensus 88 l~~~~~dg~i~v~d~~~~~~~~~~~~~~--------------------~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 88 LAVAGSRGIIRIINPITMQCIKHYVGHG--------------------NAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp EEEEETTCEEEEECTTTCCEEEEEESCC--------------------SCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred EEEecCCCEEEEEEchhceEeeeecCCC--------------------CcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 5789999999999999999888888777 7889999999 889999999999999999999
Q ss_pred CceeEEe---CCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 80 SRPLQTF---KPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 80 ~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
++.+..+ ..|...|.+++|+|++.++++++.|+.|++||++++
T Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 193 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSK 193 (366)
T ss_dssp TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSH
T ss_pred CeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCC
Confidence 9988888 679999999999999999999999999999999864
No 44
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.88 E-value=4.1e-21 Score=123.57 Aligned_cols=123 Identities=14% Similarity=0.244 Sum_probs=106.7
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCC------CCCeEEEEecCccc---------------------------cccc-C
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPH------TADVRSIHLDHYTT---------------------------EAGT-R 46 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~------~~~i~~~~~~~~~~---------------------------~~~~-~ 46 (125)
|++++.|+.|++||+++++.+..+..+ ..+|.++.|++... .... .
T Consensus 181 l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~ 260 (416)
T 2pm9_A 181 FASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQG 260 (416)
T ss_dssp EEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSC
T ss_pred EEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecC
Confidence 578999999999999999888887765 78899998865320 0112 4
Q ss_pred CCCCeEEEEECC-CCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCC-CeEEEeecCCeEEEEeCCCCC
Q psy14458 47 QGSPVSALCVDP-SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSA-YYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 47 ~~~~i~~~~~~~-~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~~ 123 (125)
|...+.+++|+| ++.++++++.|+.|++||+.+++.+..+..|...|.+++|+|++ .++++++.|+.|++||+++..
T Consensus 261 ~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 261 HQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp CSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred ccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 667899999999 89999999999999999999999999999999999999999998 899999999999999998764
No 45
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.88 E-value=3.9e-22 Score=125.29 Aligned_cols=121 Identities=15% Similarity=0.203 Sum_probs=99.9
Q ss_pred CeeecCCCeEEEEECCCCc--ceeeecCCCCCeEEEEecCcc--c-------------------------ccccCCCCCe
Q psy14458 1 MVSGHEDSSCVLYDIRGSR--PLQTFKPHTADVRSIHLDHYT--T-------------------------EAGTRQGSPV 51 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~--~~~~~~~~~~~i~~~~~~~~~--~-------------------------~~~~~~~~~i 51 (125)
|++|+.|++|++||+++++ ....+.+|..+|+++.|++.. . .....|...+
T Consensus 74 l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v 153 (316)
T 3bg1_A 74 LASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGC 153 (316)
T ss_dssp EEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCB
T ss_pred EEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCc
Confidence 5899999999999998764 456677899999999997641 0 1112455678
Q ss_pred EEEEECCC-----------------CCEEEEEeCCCcEEEEEcCCC---ceeEEeCCCCCceeEEEEccCC----CeEEE
Q psy14458 52 SALCVDPS-----------------GRLMVSGHEDSSCVLYDIRGS---RPLQTFKPHTADVRSIRFSPSA----YYLLT 107 (125)
Q Consensus 52 ~~~~~~~~-----------------~~~~~~~~~~~~i~~~d~~~~---~~~~~~~~~~~~v~~~~~~~~~----~~~~~ 107 (125)
.+++|+|+ +.++++|+.|+.|++||+... +....+.+|...|.+++|+|++ .+|++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las 233 (316)
T 3bg1_A 154 NAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIAS 233 (316)
T ss_dssp CCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEE
T ss_pred ceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEE
Confidence 89999997 368999999999999999754 4566778999999999999986 88999
Q ss_pred eecCCeEEEEeCCC
Q psy14458 108 GGYDNKLVLTDLQG 121 (125)
Q Consensus 108 ~~~d~~i~~~~~~~ 121 (125)
++.|++|++|++++
T Consensus 234 ~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 234 CSQDGRVFIWTCDD 247 (316)
T ss_dssp EETTCEEEEEECSS
T ss_pred EcCCCeEEEEEccC
Confidence 99999999999876
No 46
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.88 E-value=7.4e-21 Score=119.51 Aligned_cols=122 Identities=17% Similarity=0.292 Sum_probs=101.7
Q ss_pred CeeecCCCeEEEEECCCCc-----ceeeecCCCCCeEEEEecCcccc---------------------------------
Q psy14458 1 MVSGHEDSSCVLYDIRGSR-----PLQTFKPHTADVRSIHLDHYTTE--------------------------------- 42 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~--------------------------------- 42 (125)
|+||+.|++|++||+...+ +...+.+|..+|.++.|.+....
T Consensus 54 l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~ 133 (340)
T 4aow_A 54 ILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLS 133 (340)
T ss_dssp EEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred EEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeE
Confidence 5799999999999997654 35567889999999988541110
Q ss_pred --------------------------------cccCCCCCeEEEEECCCC--CEEEEEeCCCcEEEEEcCCCceeEEeCC
Q psy14458 43 --------------------------------AGTRQGSPVSALCVDPSG--RLMVSGHEDSSCVLYDIRGSRPLQTFKP 88 (125)
Q Consensus 43 --------------------------------~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~i~~~d~~~~~~~~~~~~ 88 (125)
....+...+.++++++++ .++++++.|+.|++||+++++....+.+
T Consensus 134 ~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~ 213 (340)
T 4aow_A 134 VAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIG 213 (340)
T ss_dssp EEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecC
Confidence 001345678899998864 5788999999999999999999999999
Q ss_pred CCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 89 HTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 89 ~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
|.+.|.+++|+|+++++++++.|+.|++||+++.
T Consensus 214 h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~ 247 (340)
T 4aow_A 214 HTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG 247 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTCEEEEEETTTT
T ss_pred CCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccC
Confidence 9999999999999999999999999999999865
No 47
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.88 E-value=2e-21 Score=125.15 Aligned_cols=122 Identities=16% Similarity=0.232 Sum_probs=104.2
Q ss_pred CeeecCCCeEEEEECCCCcceeee-------cCCCCCeEEEEecCccc--------------------------------
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTF-------KPHTADVRSIHLDHYTT-------------------------------- 41 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~-------~~~~~~i~~~~~~~~~~-------------------------------- 41 (125)
|++|+.|+.|++||+++++.+..+ .+|...|.++.|.+...
T Consensus 222 l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~ 301 (393)
T 1erj_A 222 IAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGT 301 (393)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------C
T ss_pred EEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCc
Confidence 578999999999999988877665 46888999999864211
Q ss_pred --ccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEcc------CCCeEEEeecCCe
Q psy14458 42 --EAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSP------SAYYLLTGGYDNK 113 (125)
Q Consensus 42 --~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~------~~~~~~~~~~d~~ 113 (125)
.....|...|.+++++|++.++++|+.|+.|++||..+++.+..+.+|.+.|.+++|++ ++.++++|+.|++
T Consensus 302 ~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~ 381 (393)
T 1erj_A 302 CEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCK 381 (393)
T ss_dssp EEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSE
T ss_pred ceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCc
Confidence 11124667799999999999999999999999999999999999999999999999886 6889999999999
Q ss_pred EEEEeCCCC
Q psy14458 114 LVLTDLQGT 122 (125)
Q Consensus 114 i~~~~~~~~ 122 (125)
|++|+++..
T Consensus 382 i~iW~~~~~ 390 (393)
T 1erj_A 382 ARIWKYKKI 390 (393)
T ss_dssp EEEEEEEEC
T ss_pred EEECccccc
Confidence 999998654
No 48
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.88 E-value=2.2e-21 Score=125.84 Aligned_cols=99 Identities=21% Similarity=0.318 Sum_probs=89.2
Q ss_pred eecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEe--CCCcEEEEEcCCC
Q psy14458 3 SGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGH--EDSSCVLYDIRGS 80 (125)
Q Consensus 3 t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~ 80 (125)
+|+.|+.|++||+.++++...+..+ ..+.++.|+|++..+++++ .|+.|++||+.++
T Consensus 296 ~gs~D~~I~iwd~~t~~~~~~~~~~---------------------~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~ 354 (420)
T 4gga_A 296 GGTSDRHIRIWNVCSGACLSAVDAH---------------------SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM 354 (420)
T ss_dssp ECTTTCEEEEEETTTTEEEEEEECS---------------------SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC
T ss_pred eecCCCEEEEEeCCccccceeeccc---------------------cceeeeeecCCCCeEEEEEecCCCEEEEEECCCC
Confidence 4678999999999999988887754 4688899999998887765 7899999999999
Q ss_pred ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 81 RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+++..+.+|.+.|.+++|+|+|++|++|+.|++|++||+...
T Consensus 355 ~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 355 AKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCS
T ss_pred cEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 999999999999999999999999999999999999998653
No 49
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.88 E-value=2.3e-21 Score=120.85 Aligned_cols=102 Identities=20% Similarity=0.409 Sum_probs=88.8
Q ss_pred CeeecCCCeEEEEECCCC--cceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCC--CCEEEEEeCCCcEEEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGS--RPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPS--GRLMVSGHEDSSCVLYD 76 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~i~~~d 76 (125)
|++|+.|+.|++||+... +.+..+.+|. ..|.+++|++. +.+|++++.|+.|++||
T Consensus 24 las~s~D~~v~iw~~~~~~~~~~~~l~gH~--------------------~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd 83 (297)
T 2pm7_B 24 MATCSSDKTIKIFEVEGETHKLIDTLTGHE--------------------GPVWRVDWAHPKFGTILASCSYDGKVMIWK 83 (297)
T ss_dssp EEEEETTSCEEEEEBCSSCBCCCEEECCCS--------------------SCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred EEEEeCCCEEEEEecCCCCcEEEEEEcccc--------------------CCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence 589999999999999743 5667788887 77889999763 78999999999999999
Q ss_pred cCCCc--eeEEeCCCCCceeEEEEccC--CCeEEEeecCCeEEEEeCCCC
Q psy14458 77 IRGSR--PLQTFKPHTADVRSIRFSPS--AYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 77 ~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+.+++ .+..+..|...|.+++|+|+ +.++++++.|++|++||+++.
T Consensus 84 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp BSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred cCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 98763 56677889999999999997 889999999999999999765
No 50
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.88 E-value=7.6e-21 Score=122.61 Aligned_cols=123 Identities=24% Similarity=0.345 Sum_probs=106.2
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccc---------------------cccCCCCCeEEEEECCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTE---------------------AGTRQGSPVSALCVDPS 59 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~---------------------~~~~~~~~i~~~~~~~~ 59 (125)
|++|+.|+.|++||+.+++.+..+.+|...|.++.|++.... ....|...|.+++|+|+
T Consensus 149 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 228 (401)
T 4aez_A 149 LSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSD 228 (401)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTT
T ss_pred EEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCC
Confidence 578999999999999999999999999999999998653221 12356789999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCC-CeEEEee--cCCeEEEEeCCCCC
Q psy14458 60 GRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSA-YYLLTGG--YDNKLVLTDLQGTM 123 (125)
Q Consensus 60 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~--~d~~i~~~~~~~~~ 123 (125)
+.++++++.|+.|++||+++++....+..|...|.+++|+|++ .++++++ .|+.|++||++++.
T Consensus 229 ~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~ 295 (401)
T 4aez_A 229 GLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA 295 (401)
T ss_dssp SSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC
T ss_pred CCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC
Confidence 9999999999999999999999999999999999999999976 4555554 69999999998763
No 51
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.88 E-value=1e-21 Score=123.32 Aligned_cols=102 Identities=19% Similarity=0.361 Sum_probs=88.6
Q ss_pred CeeecCCCeEEEEECCCCc--ceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECC--CCCEEEEEeCCCcEEEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSR--PLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDP--SGRLMVSGHEDSSCVLYD 76 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~i~~~d 76 (125)
|++|+.|++|++||+.+++ .+..+.+|. ..|.+++|++ ++++|++++.|+.|++||
T Consensus 28 lasgs~D~~v~lwd~~~~~~~~~~~l~gH~--------------------~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 28 LATCSSDRSVKIFDVRNGGQILIADLRGHE--------------------GPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp EEEEETTTEEEEEEEETTEEEEEEEEECCS--------------------SCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred EEEEeCCCeEEEEEecCCCcEEEEEEcCCC--------------------ccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 5899999999999998764 355677777 7888999976 478999999999999999
Q ss_pred cCCC--ceeEEeCCCCCceeEEEEccC--CCeEEEeecCCeEEEEeCCCC
Q psy14458 77 IRGS--RPLQTFKPHTADVRSIRFSPS--AYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 77 ~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~d~~i~~~~~~~~ 122 (125)
++++ +....+..|...|.+++|+|+ +.++++++.|++|++||+++.
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~ 137 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGE 137 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSS
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCC
Confidence 9886 456677889999999999997 789999999999999998764
No 52
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.88 E-value=6.4e-21 Score=121.09 Aligned_cols=123 Identities=18% Similarity=0.253 Sum_probs=104.4
Q ss_pred CeeecCCCeEEEEECCCCc--ceeeecCCCCCeEEEEecCc--ccc------------------------cccCCCCCeE
Q psy14458 1 MVSGHEDSSCVLYDIRGSR--PLQTFKPHTADVRSIHLDHY--TTE------------------------AGTRQGSPVS 52 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~------------------------~~~~~~~~i~ 52 (125)
|++++.|+.|++||+.+++ .+..+..|..+|.++.|.+. ... ....+...+.
T Consensus 72 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~ 151 (379)
T 3jrp_A 72 LASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVN 151 (379)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEE
T ss_pred EEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceE
Confidence 5799999999999999886 67777889999999999865 211 1124567899
Q ss_pred EEEECC-------------CCCEEEEEeCCCcEEEEEcCCCc----eeEEeCCCCCceeEEEEccC---CCeEEEeecCC
Q psy14458 53 ALCVDP-------------SGRLMVSGHEDSSCVLYDIRGSR----PLQTFKPHTADVRSIRFSPS---AYYLLTGGYDN 112 (125)
Q Consensus 53 ~~~~~~-------------~~~~~~~~~~~~~i~~~d~~~~~----~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~d~ 112 (125)
+++|+| ++.++++++.|+.|++||+++++ ....+..|...|.+++|+|+ +.++++++.|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg 231 (379)
T 3jrp_A 152 SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR 231 (379)
T ss_dssp EEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred EEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCC
Confidence 999999 68999999999999999998754 44567789999999999999 89999999999
Q ss_pred eEEEEeCCCCC
Q psy14458 113 KLVLTDLQGTM 123 (125)
Q Consensus 113 ~i~~~~~~~~~ 123 (125)
.|++||++++.
T Consensus 232 ~i~iwd~~~~~ 242 (379)
T 3jrp_A 232 TCIIWTQDNEQ 242 (379)
T ss_dssp CEEEEEESSTT
T ss_pred EEEEEeCCCCC
Confidence 99999998753
No 53
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.88 E-value=5.5e-21 Score=127.58 Aligned_cols=118 Identities=24% Similarity=0.416 Sum_probs=102.8
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccc---------------------ccccCCCCCeEEEEECCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTT---------------------EAGTRQGSPVSALCVDPS 59 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~---------------------~~~~~~~~~i~~~~~~~~ 59 (125)
|++++.|+.|++||. +++.+..+.+|..+|.++.|.+... .....|...+.+++|+|+
T Consensus 400 l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd 478 (577)
T 2ymu_A 400 IASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPD 478 (577)
T ss_dssp EEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTT
T ss_pred EEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCC
Confidence 578999999999995 5777888888999999999865321 112356788999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 60 GRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 60 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
++++++++.|+.|++|| .+++.+..+.+|...|++++|+|++++|++++.|+.|++||..
T Consensus 479 ~~~las~~~d~~i~iw~-~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 479 GQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp SCEEEEEETTSEEEEEE-TTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT
T ss_pred CCEEEEEeCCCEEEEEc-CCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC
Confidence 99999999999999999 4678888899999999999999999999999999999999964
No 54
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.88 E-value=1.9e-21 Score=132.84 Aligned_cols=101 Identities=24% Similarity=0.383 Sum_probs=90.7
Q ss_pred CeeecCCCeEEEEECCCCc-----ceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSR-----PLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLY 75 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~ 75 (125)
|+||+.|++|++||+.... ....+.+|. ..|.+++|+|+++++++|+.|+.|++|
T Consensus 398 l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~--------------------~~v~~v~~s~~g~~l~sgs~Dg~v~vw 457 (694)
T 3dm0_A 398 IVSASRDKSIILWKLTKDDKAYGVAQRRLTGHS--------------------HFVEDVVLSSDGQFALSGSWDGELRLW 457 (694)
T ss_dssp EEEEETTSEEEEEECCCSTTCSCEEEEEEECCS--------------------SCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred EEEEeCCCcEEEEEccCCCcccccccceecCCC--------------------CcEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 5799999999999997643 234455666 789999999999999999999999999
Q ss_pred EcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 76 DIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 76 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
|+.+++....+..|...|.+++|+|+++++++++.|++|++||+..
T Consensus 458 d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~ 503 (694)
T 3dm0_A 458 DLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLG 503 (694)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTS
T ss_pred ECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCC
Confidence 9999999999999999999999999999999999999999999754
No 55
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.88 E-value=5.9e-21 Score=122.29 Aligned_cols=122 Identities=17% Similarity=0.266 Sum_probs=105.7
Q ss_pred CeeecCCCeEEEEECCCCcceeeecC---C---CCCeEEEEecCccc-------------------------ccccC---
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKP---H---TADVRSIHLDHYTT-------------------------EAGTR--- 46 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~---~---~~~i~~~~~~~~~~-------------------------~~~~~--- 46 (125)
|++++.|+.|++||+++++.+..+.. | ..+|.++.|++... .....
T Consensus 200 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~ 279 (397)
T 1sq9_A 200 IATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTH 279 (397)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--
T ss_pred EEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcc
Confidence 57899999999999999999888888 8 89999999864211 00113
Q ss_pred ----------CCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeC------CC---------------CCceeE
Q psy14458 47 ----------QGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFK------PH---------------TADVRS 95 (125)
Q Consensus 47 ----------~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~------~~---------------~~~v~~ 95 (125)
+...+.+++|+|++.++++++.|+.|++||+.+++.+..+. .| ...|.+
T Consensus 280 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~ 359 (397)
T 1sq9_A 280 SSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFD 359 (397)
T ss_dssp ------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEE
T ss_pred cccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeE
Confidence 77889999999999999999999999999999999999888 77 899999
Q ss_pred EEEccCC----------CeEEEeecCCeEEEEeCCCC
Q psy14458 96 IRFSPSA----------YYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 96 ~~~~~~~----------~~~~~~~~d~~i~~~~~~~~ 122 (125)
++|+|++ +++++++.|+.|++|+++++
T Consensus 360 ~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 360 VKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp EEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred EEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 9999998 79999999999999999875
No 56
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.88 E-value=6.7e-21 Score=120.55 Aligned_cols=122 Identities=20% Similarity=0.369 Sum_probs=104.6
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccccccc-----------------------------------
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGT----------------------------------- 45 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----------------------------------- 45 (125)
|++++.|+.|++||+.+++.+..+. +..++.++.|.+.......
T Consensus 89 l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~ 167 (369)
T 3zwl_B 89 CVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIH 167 (369)
T ss_dssp EEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceee
Confidence 5789999999999999999888887 7788999988753321111
Q ss_pred ---CCCC--CeEEEEECCCCCEEEEEeCCCcEEEEEcCC-CceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeC
Q psy14458 46 ---RQGS--PVSALCVDPSGRLMVSGHEDSSCVLYDIRG-SRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDL 119 (125)
Q Consensus 46 ---~~~~--~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~ 119 (125)
.+.. .+.+++|+|+++++++++.+|.|++||+++ .+.+..+..|...|.+++|+|++.++++++.|+.|++||+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~ 247 (369)
T 3zwl_B 168 KIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDV 247 (369)
T ss_dssp EEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEEC
Confidence 1112 899999999999999999999999999998 7888888899999999999999999999999999999999
Q ss_pred CCCC
Q psy14458 120 QGTM 123 (125)
Q Consensus 120 ~~~~ 123 (125)
+++.
T Consensus 248 ~~~~ 251 (369)
T 3zwl_B 248 STLQ 251 (369)
T ss_dssp TTCC
T ss_pred CCCc
Confidence 8753
No 57
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.88 E-value=2.3e-22 Score=129.62 Aligned_cols=103 Identities=15% Similarity=0.242 Sum_probs=88.3
Q ss_pred CeeecCCCeEEEEECCCCcce-----eeecCCCCCeEEEEecCcccccccCCCCCeEEEEECC--------CCCEEEEEe
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPL-----QTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDP--------SGRLMVSGH 67 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~-----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~--------~~~~~~~~~ 67 (125)
|++++.|++|++||++.+... ..+.+|. ..|.+++|+| ++++|++++
T Consensus 104 las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~--------------------~~v~~v~~~p~~~~~~~~d~~~las~s 163 (393)
T 4gq1_A 104 LACVCQDNTVRLIITKNETIITQHVLGGKSGHH--------------------NFVNDIDIADVYSADNRLAEQVIASVG 163 (393)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECTTTSCS--------------------SCEEEEEEEEEECTTCSEEEEEEEEEE
T ss_pred EEEEeCCCcEEEEECCCCccceeeeecccCCCC--------------------CceEEEEEccccccccCCCCCEEEEEE
Confidence 578999999999999887543 2345666 7778888876 678999999
Q ss_pred CCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCC-CeEEEeecCCeEEEEeCCCCC
Q psy14458 68 EDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSA-YYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 68 ~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.|++|++||++++.++..+..|...|.+++|+|++ .++++++.|++|++||++++.
T Consensus 164 ~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~ 220 (393)
T 4gq1_A 164 DDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNL 220 (393)
T ss_dssp TTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC
T ss_pred CCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCc
Confidence 99999999999888877777799999999999987 589999999999999998764
No 58
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.88 E-value=6.6e-21 Score=121.93 Aligned_cols=121 Identities=16% Similarity=0.238 Sum_probs=102.7
Q ss_pred CeeecCCCeEEEEECCCCcceeeec--CCCCCeEEEEecCc-c--cccc----------------------cCCCCCeEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFK--PHTADVRSIHLDHY-T--TEAG----------------------TRQGSPVSA 53 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~--~~~~~i~~~~~~~~-~--~~~~----------------------~~~~~~i~~ 53 (125)
|++|+.|+.|++||+.+++....+. +|...|.++.|.+. . .... ..+...+.+
T Consensus 89 l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 168 (383)
T 3ei3_B 89 VAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCC 168 (383)
T ss_dssp EEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEE
T ss_pred EEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEE
Confidence 5899999999999999888776665 68999999999762 1 1111 123367999
Q ss_pred EEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCC-eEEEeecCCeEEEEeCCCC
Q psy14458 54 LCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAY-YLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~d~~i~~~~~~~~ 122 (125)
++|+|++.++++++.|+.|++||+ +++.+..+..|...|.+++|+|++. ++++++.|+.|++||+++.
T Consensus 169 ~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 237 (383)
T 3ei3_B 169 VDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNI 237 (383)
T ss_dssp EEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGC
T ss_pred EEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCC
Confidence 999999999999999999999998 5777888889999999999999998 8999999999999999863
No 59
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1.1e-21 Score=130.68 Aligned_cols=122 Identities=15% Similarity=0.177 Sum_probs=101.1
Q ss_pred CeeecCCCeEEEEECCCCc-ceeeecCCCCCeEEE--EecCcc--c-cccc--------------------CCC--CCeE
Q psy14458 1 MVSGHEDSSCVLYDIRGSR-PLQTFKPHTADVRSI--HLDHYT--T-EAGT--------------------RQG--SPVS 52 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~-~~~~~~~~~~~i~~~--~~~~~~--~-~~~~--------------------~~~--~~i~ 52 (125)
|++|+.|++|++||++++. +...+.+|..+|+++ .+.+.. . .... .+. ..+.
T Consensus 280 lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~ 359 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLV 359 (524)
T ss_dssp EEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCC
T ss_pred EEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCccc
Confidence 5899999999999998764 455678899999999 455432 1 1111 121 2478
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 53 ALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+++|+|++..+++++.|+.|++||++++..+..+.+|.+.|.+++|+|++.+|++|+.|++|++||+..+
T Consensus 360 ~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 360 PVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp CEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS
T ss_pred ceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh
Confidence 8999999999999999999999999999888888889999999999999999999999999999997643
No 60
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.88 E-value=1e-21 Score=125.30 Aligned_cols=120 Identities=16% Similarity=0.194 Sum_probs=101.3
Q ss_pred CeeecCCCeEEEEECCCC--cceeeecCCCCCeEEEEecCcc-------------------------cccccCCCCCeEE
Q psy14458 1 MVSGHEDSSCVLYDIRGS--RPLQTFKPHTADVRSIHLDHYT-------------------------TEAGTRQGSPVSA 53 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~--~~~~~~~~~~~~i~~~~~~~~~-------------------------~~~~~~~~~~i~~ 53 (125)
|++|+.|+.|++||+.++ +.+..+.+|..+|.++.|.+.. ......+...+.+
T Consensus 26 l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~ 105 (377)
T 3dwl_C 26 FVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATF 105 (377)
T ss_dssp EECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEE
T ss_pred EEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEE
Confidence 578899999999999988 6778888999999999996521 1122356788999
Q ss_pred EEECCCCCEEEEEeCCCcEEEEEcCCCc---eeEEeCC-CCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 54 LCVDPSGRLMVSGHEDSSCVLYDIRGSR---PLQTFKP-HTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~---~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
++|+|+++++++++.|+.|++||+.+++ ....+.. |...|.+++|+|+++++++++.|+.|++||++
T Consensus 106 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 106 VRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAY 176 (377)
T ss_dssp EECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEEC
T ss_pred EEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEE
Confidence 9999999999999999999999998876 4667776 99999999999999999999999999999985
No 61
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.87 E-value=2.1e-20 Score=119.69 Aligned_cols=123 Identities=15% Similarity=0.206 Sum_probs=103.9
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccc-c--c---------------------------------
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTE-A--G--------------------------------- 44 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~--~--------------------------------- 44 (125)
+++++.|+.|++||+++++.+..+..|..+|.++.|.+.... . .
T Consensus 159 ~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 238 (408)
T 4a11_B 159 VAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVE 238 (408)
T ss_dssp EEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTT
T ss_pred EEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeec
Confidence 478999999999999999999999999999999998764321 0 0
Q ss_pred ---cCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC-----------------------------------------
Q psy14458 45 ---TRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS----------------------------------------- 80 (125)
Q Consensus 45 ---~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~----------------------------------------- 80 (125)
..+...|.+++|+|++.++++++.|+.|++||+.++
T Consensus 239 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 318 (408)
T 4a11_B 239 SANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAV 318 (408)
T ss_dssp TSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEE
T ss_pred cccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEE
Confidence 235678999999999999999999999999998753
Q ss_pred ------ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 81 ------RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 81 ------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+.+..+..|...|.+++|+|++.+|++++.|+.|++||+++..
T Consensus 319 ~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 319 YTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYE 367 (408)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC--
T ss_pred EECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCC
Confidence 3455667799999999999999999999999999999998764
No 62
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.87 E-value=2.5e-20 Score=120.23 Aligned_cols=124 Identities=15% Similarity=0.211 Sum_probs=102.5
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccc-------------------------cCCC-------
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAG-------------------------TRQG------- 48 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-------------------------~~~~------- 48 (125)
|++++.|+.|++||+.+++.+..+.+|..+|.++.|++...... ..+.
T Consensus 154 l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~ 233 (420)
T 3vl1_A 154 LISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIA 233 (420)
T ss_dssp EEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEE
T ss_pred EEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEE
Confidence 57999999999999999999999999999999999965321111 0122
Q ss_pred --------------CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeC-CCCCceeEEEEccCCC-eEEEeecCC
Q psy14458 49 --------------SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFK-PHTADVRSIRFSPSAY-YLLTGGYDN 112 (125)
Q Consensus 49 --------------~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~~~~~~~d~ 112 (125)
..+.+++|+|+++++++++.||.|++||+++++....+. .|...|.+++|+|++. ++++++.|+
T Consensus 234 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg 313 (420)
T 3vl1_A 234 LFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENG 313 (420)
T ss_dssp EEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTS
T ss_pred EecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCC
Confidence 334445568899999999999999999999988777665 5788999999999998 999999999
Q ss_pred eEEEEeCCCCCC
Q psy14458 113 KLVLTDLQGTMR 124 (125)
Q Consensus 113 ~i~~~~~~~~~~ 124 (125)
.|++||++++..
T Consensus 314 ~i~vwd~~~~~~ 325 (420)
T 3vl1_A 314 MLAQWDLRSPEC 325 (420)
T ss_dssp EEEEEETTCTTS
T ss_pred eEEEEEcCCCcC
Confidence 999999988654
No 63
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.87 E-value=2.6e-21 Score=126.02 Aligned_cols=122 Identities=16% Similarity=0.266 Sum_probs=98.3
Q ss_pred CeeecCCCeEEEEECCCCcce--eeecCCCCCeEEEEecCcc---cccc----------------------cCCCCCeEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPL--QTFKPHTADVRSIHLDHYT---TEAG----------------------TRQGSPVSA 53 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~--~~~~~~~~~i~~~~~~~~~---~~~~----------------------~~~~~~i~~ 53 (125)
|++|+.||.|++||+.+++.. ..+.+|..+|+++.|++.. +... ......+.+
T Consensus 135 lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 214 (435)
T 4e54_B 135 VAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCS 214 (435)
T ss_dssp EEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCC
T ss_pred EEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEE
Confidence 579999999999999877543 3456799999999997421 1111 022345788
Q ss_pred EEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCC-eEEEeecCCeEEEEeCCCCC
Q psy14458 54 LCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAY-YLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~d~~i~~~~~~~~~ 123 (125)
++|+|++.++++|+.||.|++||++. +.+..+..|...|.+++|+|++. ++++++.|++|++||+++..
T Consensus 215 ~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~ 284 (435)
T 4e54_B 215 LDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVR 284 (435)
T ss_dssp EEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCC
T ss_pred EEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEeccccc
Confidence 99999999999999999999999864 55667888999999999999875 67889999999999998653
No 64
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.87 E-value=7.9e-21 Score=119.05 Aligned_cols=103 Identities=19% Similarity=0.302 Sum_probs=90.0
Q ss_pred CeeecCCCeEEEEECCCCc----ceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECC--CCCEEEEEeCCCcEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSR----PLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDP--SGRLMVSGHEDSSCVL 74 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~i~~ 74 (125)
|++|+.|+.|++||+.++. ....+.+|. ..|.+++|+| ++.++++++.|+.|++
T Consensus 26 l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~--------------------~~v~~~~~~~~~d~~~l~s~~~dg~v~v 85 (351)
T 3f3f_A 26 VATCSSDQHIKVFKLDKDTSNWELSDSWRAHD--------------------SSIVAIDWASPEYGRIIASASYDKTVKL 85 (351)
T ss_dssp EEEEETTSEEEEEEECSSSCCEEEEEEEECCS--------------------SCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred EEEeeCCCeEEEEECCCCCCcceecceeccCC--------------------CcEEEEEEcCCCCCCEEEEEcCCCeEEE
Confidence 5899999999999998763 444556666 7889999999 5899999999999999
Q ss_pred EEcCCC---------ceeEEeCCCCCceeEEEEccC--CCeEEEeecCCeEEEEeCCCCC
Q psy14458 75 YDIRGS---------RPLQTFKPHTADVRSIRFSPS--AYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 75 ~d~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
||+.++ +.+..+..|...|.+++|+|+ +.++++++.|+.|++||++++.
T Consensus 86 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 86 WEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp EEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred EecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 999876 557778889999999999999 9999999999999999998654
No 65
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.87 E-value=9.5e-21 Score=121.78 Aligned_cols=121 Identities=11% Similarity=0.157 Sum_probs=106.3
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccc---------------------cccCCCCCeEEEEECCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTE---------------------AGTRQGSPVSALCVDPS 59 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~---------------------~~~~~~~~i~~~~~~~~ 59 (125)
|++++.|+.|++||+++++....+..+..+|.++.|.+.... ....+...+.+++|+|+
T Consensus 262 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~ 341 (425)
T 1r5m_A 262 LLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQD 341 (425)
T ss_dssp EEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTT
T ss_pred EEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCC
Confidence 578999999999999999999999889999999998764311 11245678999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCc--------------------eeEEeCCCCC--ceeEEEEccCCCeEEEeecCCeEEEE
Q psy14458 60 GRLMVSGHEDSSCVLYDIRGSR--------------------PLQTFKPHTA--DVRSIRFSPSAYYLLTGGYDNKLVLT 117 (125)
Q Consensus 60 ~~~~~~~~~~~~i~~~d~~~~~--------------------~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~d~~i~~~ 117 (125)
+.++++++.||.|++||+.+++ .+..+..|.. .|.+++|+|++++|++++.|+.|++|
T Consensus 342 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw 421 (425)
T 1r5m_A 342 GQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVV 421 (425)
T ss_dssp SSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEE
T ss_pred CCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEE
Confidence 9999999999999999998877 8888888876 99999999999999999999999999
Q ss_pred eCCC
Q psy14458 118 DLQG 121 (125)
Q Consensus 118 ~~~~ 121 (125)
++++
T Consensus 422 ~~~g 425 (425)
T 1r5m_A 422 AIPG 425 (425)
T ss_dssp ECCC
T ss_pred eecC
Confidence 9864
No 66
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.87 E-value=1.6e-20 Score=122.66 Aligned_cols=102 Identities=26% Similarity=0.413 Sum_probs=94.1
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
|++|+.|+.|++||+.+++.+..+.+|. ..|.+++|+|++ .+++|+.||.|++||+.++
T Consensus 135 l~sgs~dg~i~vwd~~~~~~~~~~~~h~--------------------~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~ 193 (464)
T 3v7d_B 135 VITGADDKMIRVYDSINKKFLLQLSGHD--------------------GGVWALKYAHGG-ILVSGSTDRTVRVWDIKKG 193 (464)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCS--------------------SCEEEEEECSTT-EEEEEETTSCEEEEETTTT
T ss_pred EEEEcCCCcEEEEECCCCcEEEEEeCCC--------------------cCEEEEEEcCCC-EEEEEeCCCCEEEEECCCC
Confidence 5899999999999999999999888888 788899999887 8999999999999999999
Q ss_pred ceeEEeCCCCCceeEEEEc--cCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 81 RPLQTFKPHTADVRSIRFS--PSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+.+..+..|...|.+++|+ +++.++++++.|+.|++||+++..
T Consensus 194 ~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~ 238 (464)
T 3v7d_B 194 CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKES 238 (464)
T ss_dssp EEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCC
T ss_pred cEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCc
Confidence 9999999999999999998 478999999999999999998754
No 67
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.86 E-value=1.2e-20 Score=121.75 Aligned_cols=123 Identities=24% Similarity=0.303 Sum_probs=102.8
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcc--cccc----------------------cCCCCCeEEEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYT--TEAG----------------------TRQGSPVSALCV 56 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~----------------------~~~~~~i~~~~~ 56 (125)
|++|+.|+.|++||+++++....+..|..+|.++.|++.. .... ..+...+.+++|
T Consensus 232 l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~ 311 (401)
T 4aez_A 232 LASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIW 311 (401)
T ss_dssp EEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEE
T ss_pred EEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEE
Confidence 5789999999999999999988888899999999997632 1110 134467999999
Q ss_pred CCCCCEEEE--EeCCCcEEEEEcCCCceeE--EeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 57 DPSGRLMVS--GHEDSSCVLYDIRGSRPLQ--TFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 57 ~~~~~~~~~--~~~~~~i~~~d~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+|++.++++ |+.+|.|++||+.+++... .+..|...|.+++|+|++.++++++.|+.|++|++.++.
T Consensus 312 s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 312 SPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp CSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC--
T ss_pred CCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCc
Confidence 999999998 5589999999999865443 466899999999999999999999999999999998764
No 68
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.86 E-value=6.3e-21 Score=133.64 Aligned_cols=112 Identities=15% Similarity=0.233 Sum_probs=86.9
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
|+||+.|++|++||+.++.... ..+..+... ......|...|.+++|+|++.+|++|+.||+|++||+.++
T Consensus 450 laSgs~DgtVrlWd~~~g~~~~------~~~~~~~l~---~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~ 520 (902)
T 2oaj_A 450 FITGHSNGSVRIYDASHGDIQD------NASFEVNLS---RTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVN 520 (902)
T ss_dssp EEEEETTSEEEEEESSCCTTTT------TBCEEEEHH---HHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEEC
T ss_pred EEEecCCCcEEEEECCCccccC------CceEEeech---hhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCc
Confidence 5899999999999998874210 000000000 0001134478999999999999999999999999999765
Q ss_pred c---------------------------------------------eeEEeCCCCCceeEEEEccCCCeEEEeecCCeEE
Q psy14458 81 R---------------------------------------------PLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLV 115 (125)
Q Consensus 81 ~---------------------------------------------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~ 115 (125)
+ ++..+..|.+.|++++|+||| +|++|+.|++|+
T Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~ 599 (902)
T 2oaj_A 521 QFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLM 599 (902)
T ss_dssp CC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEE
T ss_pred cccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEE
Confidence 2 356778899999999999999 999999999999
Q ss_pred EEeCCCC
Q psy14458 116 LTDLQGT 122 (125)
Q Consensus 116 ~~~~~~~ 122 (125)
+||+++.
T Consensus 600 lwd~~~~ 606 (902)
T 2oaj_A 600 LIDRRGP 606 (902)
T ss_dssp EEETTTT
T ss_pred EEECCCC
Confidence 9998764
No 69
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1.9e-20 Score=122.32 Aligned_cols=121 Identities=17% Similarity=0.192 Sum_probs=103.3
Q ss_pred eeecCCCeEEEEECC--CCcceeeec--CCCCCeEEEEecCccc--------------------------ccccCCCCCe
Q psy14458 2 VSGHEDSSCVLYDIR--GSRPLQTFK--PHTADVRSIHLDHYTT--------------------------EAGTRQGSPV 51 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~--~~~~~~~~~--~~~~~i~~~~~~~~~~--------------------------~~~~~~~~~i 51 (125)
++++.|+.|++||+. +++.+..+. .+...|.++.|.+... .....|...|
T Consensus 119 ~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v 198 (450)
T 2vdu_B 119 ACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSML 198 (450)
T ss_dssp EEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCE
T ss_pred EEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCce
Confidence 789999999999998 788877775 4668889998864211 0223466789
Q ss_pred EEEEECCC---CCEEEEEeCCCcEEEEEcCCCceeEE-eCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 52 SALCVDPS---GRLMVSGHEDSSCVLYDIRGSRPLQT-FKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 52 ~~~~~~~~---~~~~~~~~~~~~i~~~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.+++|+|+ +.++++++.|+.|++||+.+++.+.. +.+|...|.+++|+ ++.++++++.|+.|++||++++.
T Consensus 199 ~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~ 273 (450)
T 2vdu_B 199 TDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGK 273 (450)
T ss_dssp EEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCC
T ss_pred EEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCc
Confidence 99999999 89999999999999999999888877 55899999999999 99999999999999999998764
No 70
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.86 E-value=8.3e-20 Score=114.39 Aligned_cols=122 Identities=19% Similarity=0.251 Sum_probs=105.4
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccc---------------------cCCCCCeEEEEECCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAG---------------------TRQGSPVSALCVDPS 59 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---------------------~~~~~~i~~~~~~~~ 59 (125)
|++++.|+.|++||+++++.+..+..|..++.++.|.+...... ..+...+.+++|+|+
T Consensus 156 l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~ 235 (337)
T 1gxr_A 156 CFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPT 235 (337)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTT
T ss_pred EEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCC
Confidence 47899999999999999999999999999999999975321111 134578999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 60 GRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 60 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+.++++++.++.|++||+.+++.. .+..|...|.++.|+|+++++++++.|+.+++||++++.
T Consensus 236 ~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~ 298 (337)
T 1gxr_A 236 GEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA 298 (337)
T ss_dssp SSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred CCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCe
Confidence 999999999999999999887754 566799999999999999999999999999999998764
No 71
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.86 E-value=3.5e-20 Score=132.61 Aligned_cols=122 Identities=20% Similarity=0.255 Sum_probs=108.7
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccc----------------------ccccCCCCCeEEEEECC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTT----------------------EAGTRQGSPVSALCVDP 58 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~----------------------~~~~~~~~~i~~~~~~~ 58 (125)
|++|+.|+.|++||+.+++.+..+.+|...|.++.|++... .....|...+.+++|+|
T Consensus 630 l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~ 709 (1249)
T 3sfz_A 630 IASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTN 709 (1249)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECS
T ss_pred EEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEec
Confidence 57899999999999999999999999999999999975321 11125778899999999
Q ss_pred --CCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 59 --SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 59 --~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
++.++++++.|+.|++||+.+++....+.+|...|.+++|+|+++++++++.|+.|++||++++
T Consensus 710 ~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~ 775 (1249)
T 3sfz_A 710 KSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSA 775 (1249)
T ss_dssp SSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGT
T ss_pred CCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCC
Confidence 4568999999999999999999999999999999999999999999999999999999998764
No 72
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1.6e-20 Score=116.76 Aligned_cols=100 Identities=20% Similarity=0.263 Sum_probs=87.8
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
|++++.|+.|++||+++++.+..+..|. ..+.+++|+|++ .+++++.||.|++||+.++
T Consensus 198 ~~~~~~dg~i~i~d~~~~~~~~~~~~~~--------------------~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~ 256 (313)
T 3odt_A 198 FISCSNDGLIKLVDMHTGDVLRTYEGHE--------------------SFVYCIKLLPNG-DIVSCGEDRTVRIWSKENG 256 (313)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCS--------------------SCEEEEEECTTS-CEEEEETTSEEEEECTTTC
T ss_pred EEEccCCCeEEEEECCchhhhhhhhcCC--------------------ceEEEEEEecCC-CEEEEecCCEEEEEECCCC
Confidence 4677888888888888777777777666 788999999998 6889999999999999999
Q ss_pred ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 81 RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+....+..|...|.+++|+|+++ +++++.|+.|++||++++
T Consensus 257 ~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 257 SLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKS 297 (313)
T ss_dssp CEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGG
T ss_pred ceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCC
Confidence 99999999999999999999998 667899999999999865
No 73
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.86 E-value=9.4e-21 Score=123.40 Aligned_cols=123 Identities=15% Similarity=0.166 Sum_probs=93.6
Q ss_pred CeeecCCCeEEEEECCCCcceeeecC--CCCCeEEEEecC---------------------cccccccCCCCCeEEEEEC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKP--HTADVRSIHLDH---------------------YTTEAGTRQGSPVSALCVD 57 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~--~~~~i~~~~~~~---------------------~~~~~~~~~~~~i~~~~~~ 57 (125)
|++|+.|++|++||++++........ +...+.++.|++ ........|...|.+++|+
T Consensus 180 l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~ 259 (435)
T 4e54_B 180 FYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALN 259 (435)
T ss_dssp EEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEEC
T ss_pred EEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeec
Confidence 58999999999999986543322222 223344555432 2223334677899999999
Q ss_pred CCCC-EEEEEeCCCcEEEEEcCCCceeEE---eCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 58 PSGR-LMVSGHEDSSCVLYDIRGSRPLQT---FKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 58 ~~~~-~~~~~~~~~~i~~~d~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
|++. ++++++.|+.|++||+++.+.... ...|...|.+++|+|++.+|++++.|+.|++||++++.
T Consensus 260 p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 260 PCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWD 329 (435)
T ss_dssp TTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSS
T ss_pred CCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCc
Confidence 9875 788999999999999988654332 34689999999999999999999999999999998753
No 74
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.86 E-value=9.7e-21 Score=126.82 Aligned_cols=100 Identities=17% Similarity=0.339 Sum_probs=91.9
Q ss_pred CeeecCCCeEEEEECCCCcceeeecC-CCCCeEEEEecCcccccccCCCCCeEEEEECC----------CCCEEEEEeCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKP-HTADVRSIHLDHYTTEAGTRQGSPVSALCVDP----------SGRLMVSGHED 69 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~----------~~~~~~~~~~~ 69 (125)
|++++.|+.|++||+.+++.+..+.+ |. ..|++++|+| ++.++++++.|
T Consensus 503 l~~~~~dg~i~iw~~~~~~~~~~~~~~h~--------------------~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~d 562 (615)
T 1pgu_A 503 IAAGDVMGKILLYDLQSREVKTSRWAFRT--------------------SKINAISWKPAEKGANEEEIEEDLVATGSLD 562 (615)
T ss_dssp EEEEETTSCEEEEETTTTEEEECCSCCCS--------------------SCEEEEEECCCC------CCSCCEEEEEETT
T ss_pred EEEcCCCCeEEEeeCCCCcceeEeecCCC--------------------CceeEEEEcCccccccccccCCCEEEEEcCC
Confidence 57899999999999999998887776 66 7889999999 99999999999
Q ss_pred CcEEEEEcCCC-ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 70 SSCVLYDIRGS-RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 70 ~~i~~~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
+.|++||+.++ +.+..+..|...|.+++|+|++. |++++.|+.|++|+++.
T Consensus 563 g~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 563 TNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp SCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred CcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence 99999999987 78888999999999999999999 99999999999999875
No 75
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.86 E-value=1.6e-20 Score=120.99 Aligned_cols=104 Identities=16% Similarity=0.239 Sum_probs=93.8
Q ss_pred CeeecCCCeEEEEECCCCcceeee--cCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTF--KPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIR 78 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~ 78 (125)
|++++.|+.|++||+.+++.+..+ ..|. ..|.+++|+|++.++++++.|+.|++||++
T Consensus 147 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--------------------~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 206 (402)
T 2aq5_A 147 LLSAGCDNVILVWDVGTGAAVLTLGPDVHP--------------------DTIYSVDWSRDGALICTSCRDKRVRVIEPR 206 (402)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECTTTCC--------------------SCEEEEEECTTSSCEEEEETTSEEEEEETT
T ss_pred EEEEcCCCEEEEEECCCCCccEEEecCCCC--------------------CceEEEEECCCCCEEEEEecCCcEEEEeCC
Confidence 578999999999999999888888 5666 788999999999999999999999999999
Q ss_pred CCceeEEe-CCCCCc-eeEEEEccCCCeEEEe---ecCCeEEEEeCCCCCC
Q psy14458 79 GSRPLQTF-KPHTAD-VRSIRFSPSAYYLLTG---GYDNKLVLTDLQGTMR 124 (125)
Q Consensus 79 ~~~~~~~~-~~~~~~-v~~~~~~~~~~~~~~~---~~d~~i~~~~~~~~~~ 124 (125)
+++.+..+ ..|.+. +.++.|+|++.++++| +.|+.|++||+++...
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~ 257 (402)
T 2aq5_A 207 KGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEE 257 (402)
T ss_dssp TTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSS
T ss_pred CCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccC
Confidence 99998888 678765 8999999999999999 7999999999987643
No 76
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.86 E-value=2.3e-20 Score=118.08 Aligned_cols=102 Identities=20% Similarity=0.456 Sum_probs=89.6
Q ss_pred CeeecCCCeEEEEECCC-Ccce-eeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcC
Q psy14458 1 MVSGHEDSSCVLYDIRG-SRPL-QTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIR 78 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~-~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~ 78 (125)
|++|+.|+.|++||+.+ +..+ ..+.+|. ..|.+++|+|+++++++++.||.|++||+.
T Consensus 57 l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~--------------------~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~ 116 (368)
T 3mmy_A 57 LIAGSWANDVRCWEVQDSGQTIPKAQQMHT--------------------GPVLDVCWSDDGSKVFTASCDKTAKMWDLS 116 (368)
T ss_dssp EEEEETTSEEEEEEECTTSCEEEEEEEECS--------------------SCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EEEECCCCcEEEEEcCCCCceeEEEecccc--------------------CCEEEEEECcCCCEEEEEcCCCcEEEEEcC
Confidence 58999999999999987 4443 5566676 788999999999999999999999999999
Q ss_pred CCceeEEeCCCCCceeEEEE--ccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 79 GSRPLQTFKPHTADVRSIRF--SPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 79 ~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+++.... ..|...|.++.| +|++.++++++.|+.|++||++++.
T Consensus 117 ~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 117 SNQAIQI-AQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp TTEEEEE-EECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred CCCceee-ccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence 9887764 459999999999 8899999999999999999998764
No 77
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.86 E-value=4.5e-21 Score=124.49 Aligned_cols=103 Identities=17% Similarity=0.314 Sum_probs=92.2
Q ss_pred CeeecCCCeEEEEECCCCcceeeecC--CCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKP--HTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIR 78 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~ 78 (125)
|++|+.|+.|++||+++++.+..+.. |. ..|++++|+|++.++++|+.||.|++||++
T Consensus 185 l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~--------------------~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 244 (437)
T 3gre_A 185 LVALTNLSRVIIFDIRTLERLQIIENSPRH--------------------GAVSSICIDEECCVLILGTTRGIIDIWDIR 244 (437)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCGGG--------------------CCEEEEEECTTSCEEEEEETTSCEEEEETT
T ss_pred EEEEeCCCeEEEEeCCCCeeeEEEccCCCC--------------------CceEEEEECCCCCEEEEEcCCCeEEEEEcC
Confidence 57899999999999999999888876 55 788999999999999999999999999999
Q ss_pred CCceeEEeC-CCCCceeEEEEcc----CCCeEEEeecCCeEEEEeCCCCC
Q psy14458 79 GSRPLQTFK-PHTADVRSIRFSP----SAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 79 ~~~~~~~~~-~~~~~v~~~~~~~----~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+++.+..+. .|...|.+++|+| ++.++++++.|+.|++||++++.
T Consensus 245 ~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 294 (437)
T 3gre_A 245 FNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGH 294 (437)
T ss_dssp TTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTE
T ss_pred CccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCc
Confidence 999988886 6888999996665 67899999999999999998653
No 78
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.86 E-value=7.1e-20 Score=116.25 Aligned_cols=122 Identities=16% Similarity=0.170 Sum_probs=101.9
Q ss_pred CeeecCCCeEEEEECCCCcceee--ecCCCCCeEEEEecCccc--------------------------ccccCCCCCeE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQT--FKPHTADVRSIHLDHYTT--------------------------EAGTRQGSPVS 52 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~--------------------------~~~~~~~~~i~ 52 (125)
|++++.|+.|++||+.+++.... +..+...|.++.|.+... .....+...+.
T Consensus 67 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~ 146 (372)
T 1k8k_C 67 IVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVL 146 (372)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEE
T ss_pred EEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCee
Confidence 57899999999999988765433 356888999999864211 11124567899
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEEcC------------------CCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeE
Q psy14458 53 ALCVDPSGRLMVSGHEDSSCVLYDIR------------------GSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKL 114 (125)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~i~~~d~~------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i 114 (125)
+++|+|++.++++++.|+.|++||++ .++.+..+..|...|.+++|+|++.++++++.|+.|
T Consensus 147 ~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 226 (372)
T 1k8k_C 147 SLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTV 226 (372)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEE
T ss_pred EEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEE
Confidence 99999999999999999999999954 567888888899999999999999999999999999
Q ss_pred EEEeCCCC
Q psy14458 115 VLTDLQGT 122 (125)
Q Consensus 115 ~~~~~~~~ 122 (125)
++||++++
T Consensus 227 ~i~d~~~~ 234 (372)
T 1k8k_C 227 CLADADKK 234 (372)
T ss_dssp EEEEGGGT
T ss_pred EEEECCCC
Confidence 99999765
No 79
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.86 E-value=1.7e-20 Score=120.12 Aligned_cols=121 Identities=17% Similarity=0.300 Sum_probs=104.1
Q ss_pred CeeecCCCeEEEEECCC------Cccee-----ee-------cCCCCCeEEEEecCcccccc------------------
Q psy14458 1 MVSGHEDSSCVLYDIRG------SRPLQ-----TF-------KPHTADVRSIHLDHYTTEAG------------------ 44 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~------~~~~~-----~~-------~~~~~~i~~~~~~~~~~~~~------------------ 44 (125)
|++++.|+.|++||+.. ++.+. .+ ..+...|.++.|.+.. ...
T Consensus 141 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~ 219 (397)
T 1sq9_A 141 LVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRP 219 (397)
T ss_dssp EEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEE
T ss_pred EEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCce
Confidence 57899999999999998 66665 66 3478888898887543 111
Q ss_pred ----cC---C---CCCeEEEEECCCCCEEEEEeCC---CcEEEEEcCCCceeEEeCC-------------CCCceeEEEE
Q psy14458 45 ----TR---Q---GSPVSALCVDPSGRLMVSGHED---SSCVLYDIRGSRPLQTFKP-------------HTADVRSIRF 98 (125)
Q Consensus 45 ----~~---~---~~~i~~~~~~~~~~~~~~~~~~---~~i~~~d~~~~~~~~~~~~-------------~~~~v~~~~~ 98 (125)
.. | ...+.+++|+|++.++++++.| +.|++||+++++.+..+.. |...|.+++|
T Consensus 220 ~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 299 (397)
T 1sq9_A 220 LYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSF 299 (397)
T ss_dssp EEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEE
T ss_pred eEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEE
Confidence 13 5 7889999999999999999999 9999999999999999988 9999999999
Q ss_pred ccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 99 SPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 99 ~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+|+++++++++.|+.|++||++++
T Consensus 300 ~~~~~~l~~~~~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 300 NDSGETLCSAGWDGKLRFWDVKTK 323 (397)
T ss_dssp CSSSSEEEEEETTSEEEEEETTTT
T ss_pred CCCCCEEEEEeCCCeEEEEEcCCC
Confidence 999999999999999999999865
No 80
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.86 E-value=2.7e-20 Score=120.82 Aligned_cols=122 Identities=12% Similarity=0.268 Sum_probs=99.2
Q ss_pred CeeecCCCeEEEEECCCCc-----------ceeeecCCC------------CCeEEEEecCccc----c-----------
Q psy14458 1 MVSGHEDSSCVLYDIRGSR-----------PLQTFKPHT------------ADVRSIHLDHYTT----E----------- 42 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~-----------~~~~~~~~~------------~~i~~~~~~~~~~----~----------- 42 (125)
|++|+.|+.|++||+.+++ ....+.+|. .+|.++.|.+... .
T Consensus 43 la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw 122 (447)
T 3dw8_B 43 LATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLW 122 (447)
T ss_dssp EEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEE
T ss_pred EEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEE
Confidence 5899999999999998776 466777887 8899999876420 0
Q ss_pred -------------------------------------------------cccCCCCCeEEEEECCCCCEEEEEeCCCcEE
Q psy14458 43 -------------------------------------------------AGTRQGSPVSALCVDPSGRLMVSGHEDSSCV 73 (125)
Q Consensus 43 -------------------------------------------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~ 73 (125)
....|...|.+++|+|++++++++ .|+.|+
T Consensus 123 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~ 201 (447)
T 3dw8_B 123 KISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRIN 201 (447)
T ss_dssp EEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEE
T ss_pred ecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEE
Confidence 023477889999999999999999 799999
Q ss_pred EEEcCC-CceeE-------EeCCCCCceeEEEEccCC-CeEEEeecCCeEEEEeCCCCC
Q psy14458 74 LYDIRG-SRPLQ-------TFKPHTADVRSIRFSPSA-YYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 74 ~~d~~~-~~~~~-------~~~~~~~~v~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+||+.+ ++.+. .+..|...|.+++|+|++ .++++++.|+.|++||++++.
T Consensus 202 iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 260 (447)
T 3dw8_B 202 LWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASA 260 (447)
T ss_dssp EEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCS
T ss_pred EEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCc
Confidence 999984 33443 245789999999999998 999999999999999998764
No 81
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.86 E-value=3e-20 Score=128.15 Aligned_cols=123 Identities=15% Similarity=0.223 Sum_probs=108.0
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccc----------------------ccccCCCCCeEEEEECC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTT----------------------EAGTRQGSPVSALCVDP 58 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~----------------------~~~~~~~~~i~~~~~~~ 58 (125)
|++++.|+.|++||+.+++.+..+..|..+|+++.|++... .....|...|.+++|+|
T Consensus 28 la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~ 107 (814)
T 3mkq_A 28 VLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHP 107 (814)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECS
T ss_pred EEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeC
Confidence 57899999999999999999999999999999999975321 11235778899999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCC-ceeEEeCCCCCceeEEEEcc-CCCeEEEeecCCeEEEEeCCCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGS-RPLQTFKPHTADVRSIRFSP-SAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+++++++++.||.|++||+.++ .....+..|...|.+++|+| ++..+++++.|+.|++||++++.
T Consensus 108 ~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~ 174 (814)
T 3mkq_A 108 TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST 174 (814)
T ss_dssp SSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSS
T ss_pred CCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 9999999999999999999886 66777888999999999999 88999999999999999997654
No 82
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.86 E-value=5.1e-20 Score=119.83 Aligned_cols=123 Identities=21% Similarity=0.323 Sum_probs=103.0
Q ss_pred CeeecCCCeEEEEECCC----------CcceeeecCCCCCeEEEEecCccc-----------------------------
Q psy14458 1 MVSGHEDSSCVLYDIRG----------SRPLQTFKPHTADVRSIHLDHYTT----------------------------- 41 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~----------~~~~~~~~~~~~~i~~~~~~~~~~----------------------------- 41 (125)
|++++.|+.|++||+.. .+.+..+.+|..+|.++.|++...
T Consensus 144 lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 223 (430)
T 2xyi_A 144 IATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDA 223 (430)
T ss_dssp EEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEEC
T ss_pred EEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceecc
Confidence 57899999999999986 566777888999999999865221
Q ss_pred -ccccCCCCCeEEEEECC-CCCEEEEEeCCCcEEEEEcCCC---ceeEEeCCCCCceeEEEEccCCC-eEEEeecCCeEE
Q psy14458 42 -EAGTRQGSPVSALCVDP-SGRLMVSGHEDSSCVLYDIRGS---RPLQTFKPHTADVRSIRFSPSAY-YLLTGGYDNKLV 115 (125)
Q Consensus 42 -~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~i~~~d~~~~---~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~d~~i~ 115 (125)
.....|...|.+++|+| ++.++++++.++.|++||++++ +.+..+..|...|++++|+|++. ++++|+.|+.|+
T Consensus 224 ~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~ 303 (430)
T 2xyi_A 224 KNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVA 303 (430)
T ss_dssp SEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred ceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEE
Confidence 11125667899999999 6789999999999999999986 56777878999999999999887 688999999999
Q ss_pred EEeCCCCC
Q psy14458 116 LTDLQGTM 123 (125)
Q Consensus 116 ~~~~~~~~ 123 (125)
+||+++..
T Consensus 304 vwd~~~~~ 311 (430)
T 2xyi_A 304 LWDLRNLK 311 (430)
T ss_dssp EEETTCTT
T ss_pred EEeCCCCC
Confidence 99998743
No 83
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.85 E-value=1.3e-20 Score=125.59 Aligned_cols=123 Identities=8% Similarity=0.066 Sum_probs=98.9
Q ss_pred CeeecCCCeEEEEECCCCcc-----------eeeecCCCCCeEEEEecCccc----------------------ccccCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRP-----------LQTFKPHTADVRSIHLDHYTT----------------------EAGTRQ 47 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~-----------~~~~~~~~~~i~~~~~~~~~~----------------------~~~~~~ 47 (125)
|++++.|++|++||+..++. ...+.+|..+|+++.|++... .....|
T Consensus 228 LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H 307 (524)
T 2j04_B 228 LSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVH 307 (524)
T ss_dssp EEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECS
T ss_pred EEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecc
Confidence 57899999999999976642 235677889999999854211 112357
Q ss_pred CCCeEEE--EECCCC-CEEEEEeCCCcEEEEEcCCCceeEEeCCCCC--ceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 48 GSPVSAL--CVDPSG-RLMVSGHEDSSCVLYDIRGSRPLQTFKPHTA--DVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 48 ~~~i~~~--~~~~~~-~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
...|.++ +++|++ .+|++++.|++|++||+++++....+..|.. .|.+++|+|++..+++++.|++|++||++++
T Consensus 308 ~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~ 387 (524)
T 2j04_B 308 DSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAA 387 (524)
T ss_dssp SSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCT
T ss_pred cccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECccc
Confidence 7889999 567887 8999999999999999998877666655543 4789999999999999999999999999876
Q ss_pred C
Q psy14458 123 M 123 (125)
Q Consensus 123 ~ 123 (125)
.
T Consensus 388 ~ 388 (524)
T 2j04_B 388 F 388 (524)
T ss_dssp T
T ss_pred c
Confidence 4
No 84
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.85 E-value=4e-20 Score=118.30 Aligned_cols=102 Identities=21% Similarity=0.336 Sum_probs=89.8
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCC-EEEEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGR-LMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~i~~~d~~~ 79 (125)
|++|+.|+.|++||+ .++.+..+..|. ..|.+++|+|+++ ++++++.|+.|++||+++
T Consensus 178 l~~~~~d~~i~i~d~-~~~~~~~~~~h~--------------------~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 178 LATGDSTGRLLLLGL-DGHEIFKEKLHK--------------------AKVTHAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp EEEEETTSEEEEEET-TSCEEEEEECSS--------------------SCEEEEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred EEEECCCCCEEEEEC-CCCEEEEeccCC--------------------CcEEEEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 578999999999998 467777777777 7889999999998 999999999999999987
Q ss_pred ----CceeEEeCCCCCceeEEEEcc-CCCeEEEeecCCeEEEEeCCCCCC
Q psy14458 80 ----SRPLQTFKPHTADVRSIRFSP-SAYYLLTGGYDNKLVLTDLQGTMR 124 (125)
Q Consensus 80 ----~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~~ 124 (125)
++.+..+ .|...|.+++|+| ++.++++++.|+.|++||++++..
T Consensus 237 ~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 237 IKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp CCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTS
T ss_pred CCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 5566656 5999999999999 999999999999999999987643
No 85
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.85 E-value=9e-20 Score=114.23 Aligned_cols=102 Identities=23% Similarity=0.381 Sum_probs=91.4
Q ss_pred CeeecCCCeEEEEECCCCc--ceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcC
Q psy14458 1 MVSGHEDSSCVLYDIRGSR--PLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIR 78 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~ 78 (125)
|++++.|+.|++||+.+++ ....+..+. ..+.+++|+|+++++++++.++.|++||++
T Consensus 112 l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~--------------------~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~ 171 (337)
T 1gxr_A 112 LIVGGEASTLSIWDLAAPTPRIKAELTSSA--------------------PACYALAISPDSKVCFSCCSDGNIAVWDLH 171 (337)
T ss_dssp EEEEESSSEEEEEECCCC--EEEEEEECSS--------------------SCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEEEcCCCcEEEEECCCCCcceeeecccCC--------------------CceEEEEECCCCCEEEEEeCCCcEEEEeCC
Confidence 4789999999999998876 344555555 678999999999999999999999999999
Q ss_pred CCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 79 GSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 79 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+++.+..+..|...+.+++|+|+++++++++.|+.|++||++++
T Consensus 172 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~ 215 (337)
T 1gxr_A 172 NQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG 215 (337)
T ss_dssp TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred CCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCC
Confidence 99999999999999999999999999999999999999999865
No 86
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.85 E-value=1.7e-19 Score=114.10 Aligned_cols=122 Identities=15% Similarity=0.293 Sum_probs=106.1
Q ss_pred CeeecCCCeEEEEECCC-CcceeeecCCCCCeEEEEecCcccccc---------------------cCCCCCeEEEEECC
Q psy14458 1 MVSGHEDSSCVLYDIRG-SRPLQTFKPHTADVRSIHLDHYTTEAG---------------------TRQGSPVSALCVDP 58 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~---------------------~~~~~~i~~~~~~~ 58 (125)
|++++.|+.|++||+++ .+....+..+..+|.++.|.+...... ..+...+.+++|+|
T Consensus 190 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~ 269 (369)
T 3zwl_B 190 IIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITP 269 (369)
T ss_dssp EEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECS
T ss_pred EEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecC
Confidence 47899999999999998 677888888999999999975332111 13456789999999
Q ss_pred CCCEEEEEeCCC--------------cEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 59 SGRLMVSGHEDS--------------SCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 59 ~~~~~~~~~~~~--------------~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
++.++++++.++ .+++||..+++.+..+..|...|.+++|+|+++++++++.|+.|++|+++++
T Consensus 270 ~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 270 LKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp SSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHH
T ss_pred CCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccc
Confidence 999999999888 8999999999999999999999999999999999999999999999998753
No 87
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.85 E-value=1e-19 Score=121.93 Aligned_cols=123 Identities=19% Similarity=0.232 Sum_probs=106.7
Q ss_pred CeeecCCCeEEEEECCCC--------cceeeecCCCCCeEEEEecCcccc------------------------cccCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGS--------RPLQTFKPHTADVRSIHLDHYTTE------------------------AGTRQG 48 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~--------~~~~~~~~~~~~i~~~~~~~~~~~------------------------~~~~~~ 48 (125)
|++++.|+.|++||+.++ +....+..+..+|.++.|.+.... ....|.
T Consensus 81 l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~ 160 (615)
T 1pgu_A 81 LCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHS 160 (615)
T ss_dssp EEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCS
T ss_pred EEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecCC
Confidence 578999999999999754 566677888999999999764321 123567
Q ss_pred CCeEEEEECCCCC-EEEEEeCCCcEEEEEcCCCceeEEeCCCCC---ceeEEEEccC-CCeEEEeecCCeEEEEeCCCCC
Q psy14458 49 SPVSALCVDPSGR-LMVSGHEDSSCVLYDIRGSRPLQTFKPHTA---DVRSIRFSPS-AYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 49 ~~i~~~~~~~~~~-~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
..|.+++|+|+++ .+++++.|+.|++||..+++.+..+..|.. .|.+++|+|+ ++++++++.|+.|++||++++.
T Consensus 161 ~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 240 (615)
T 1pgu_A 161 QRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE 240 (615)
T ss_dssp SCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCC
T ss_pred ccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 8899999999997 899999999999999999999999999998 9999999999 9999999999999999998653
No 88
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.85 E-value=8e-20 Score=119.42 Aligned_cols=101 Identities=22% Similarity=0.317 Sum_probs=93.7
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
|++|+.|+.|++||+.+++++..+.+|. ..+.+++|+|+++++++++.|+.|++||+.++
T Consensus 283 l~~~~~d~~i~vwd~~~~~~~~~~~~~~--------------------~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~ 342 (464)
T 3v7d_B 283 VVSGSYDNTLIVWDVAQMKCLYILSGHT--------------------DRIYSTIYDHERKRCISASMDTTIRIWDLENG 342 (464)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCS--------------------SCEEEEEEETTTTEEEEEETTSCEEEEETTTT
T ss_pred EEEEeCCCeEEEEECCCCcEEEEecCCC--------------------CCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Confidence 5789999999999999999988888777 78899999999999999999999999999999
Q ss_pred ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 81 RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+.+..+..|...|.++.|+ +.++++++.|+.|++||+++..
T Consensus 343 ~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~ 383 (464)
T 3v7d_B 343 ELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYS 383 (464)
T ss_dssp EEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCC
T ss_pred cEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCc
Confidence 9999999999999999996 5799999999999999998753
No 89
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.85 E-value=3.7e-20 Score=117.58 Aligned_cols=102 Identities=18% Similarity=0.379 Sum_probs=90.8
Q ss_pred CeeecCCCeEEEEECC--CCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCC--CCEEEEEeCCCcEEEEE
Q psy14458 1 MVSGHEDSSCVLYDIR--GSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPS--GRLMVSGHEDSSCVLYD 76 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~i~~~d 76 (125)
|++|+.|+.|++||+. +++.+..+.+|. ..|.+++|+++ +.++++++.||.|++||
T Consensus 26 l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~--------------------~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd 85 (379)
T 3jrp_A 26 LATCSSDKTIKIFEVEGETHKLIDTLTGHE--------------------GPVWRVDWAHPKFGTILASCSYDGKVLIWK 85 (379)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCS--------------------SCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred EEEEECCCcEEEEecCCCcceeeeEecCCC--------------------CcEEEEEeCCCCCCCEEEEeccCCEEEEEE
Confidence 5789999999999997 445666777777 78889999877 89999999999999999
Q ss_pred cCCCc--eeEEeCCCCCceeEEEEccC--CCeEEEeecCCeEEEEeCCCC
Q psy14458 77 IRGSR--PLQTFKPHTADVRSIRFSPS--AYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 77 ~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+.+++ ....+..|...|.+++|+|+ +.++++++.|+.|++||+++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 86 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 135 (379)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTT
T ss_pred cCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCC
Confidence 99986 67778889999999999998 999999999999999999876
No 90
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.85 E-value=7.1e-20 Score=128.38 Aligned_cols=120 Identities=18% Similarity=0.175 Sum_probs=100.9
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccc---------------------------------ccccCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTT---------------------------------EAGTRQ 47 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~---------------------------------~~~~~~ 47 (125)
|++++.|++|++||+.+++++..+. +...|+++.|++... .....|
T Consensus 72 L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h 150 (902)
T 2oaj_A 72 LVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAAR 150 (902)
T ss_dssp EEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSC
T ss_pred EEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccC
Confidence 5789999999999999998888776 667899888864211 112346
Q ss_pred CCCeEEEEECCC-CCEEEEEeCCCcEEEEEcCCCceeEEeCCC------------------CCceeEEEEccCCCeEEEe
Q psy14458 48 GSPVSALCVDPS-GRLMVSGHEDSSCVLYDIRGSRPLQTFKPH------------------TADVRSIRFSPSAYYLLTG 108 (125)
Q Consensus 48 ~~~i~~~~~~~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~------------------~~~v~~~~~~~~~~~~~~~ 108 (125)
...|.+++|+|+ +..+++|+.|+.| +||+++++.+..+..| ...|.+++|+|+|.+|+++
T Consensus 151 ~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasg 229 (902)
T 2oaj_A 151 LSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITI 229 (902)
T ss_dssp CCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEE
T ss_pred CCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEE
Confidence 678999999996 4789999999999 9999999888877755 4679999999999999999
Q ss_pred ecCCeEEEEeCCCC
Q psy14458 109 GYDNKLVLTDLQGT 122 (125)
Q Consensus 109 ~~d~~i~~~~~~~~ 122 (125)
+.|++|++||++++
T Consensus 230 s~Dg~i~lWd~~~g 243 (902)
T 2oaj_A 230 HEDNSLVFWDANSG 243 (902)
T ss_dssp ETTCCEEEEETTTC
T ss_pred ECCCeEEEEECCCC
Confidence 99999999999765
No 91
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.85 E-value=1.6e-19 Score=114.63 Aligned_cols=120 Identities=14% Similarity=0.225 Sum_probs=101.5
Q ss_pred CeeecCCCeEEEEECCCCc--ceeeecCCCCCeEEEEecCccc------------------------ccccCCCCCeEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSR--PLQTFKPHTADVRSIHLDHYTT------------------------EAGTRQGSPVSAL 54 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~~~~~i~~~ 54 (125)
|++++.|+.|++||+.+++ .+..+.+|..+|.++.|.+... .....+...+.++
T Consensus 23 l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~ 102 (372)
T 1k8k_C 23 IAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCV 102 (372)
T ss_dssp EEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEE
T ss_pred EEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEE
Confidence 4788899999999999887 7888889999999999864221 1113466789999
Q ss_pred EECCCCCEEEEEeCCCcEEEEEcCCCce---eEEe-CCCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 55 CVDPSGRLMVSGHEDSSCVLYDIRGSRP---LQTF-KPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 55 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~---~~~~-~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
+|+|+++++++++.++.|++||+..++. ...+ ..|...|.+++|+|++.++++++.|+.+++||++
T Consensus 103 ~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~ 172 (372)
T 1k8k_C 103 RWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAY 172 (372)
T ss_dssp EECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECC
T ss_pred EECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcc
Confidence 9999999999999999999999988763 3333 5788999999999999999999999999999975
No 92
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.85 E-value=7.7e-20 Score=126.11 Aligned_cols=122 Identities=18% Similarity=0.254 Sum_probs=104.6
Q ss_pred CeeecCCCeEEEEECCCCc--ceeeecCCCCCeEEEEecCc--ccc------------------------cccCCCCCeE
Q psy14458 1 MVSGHEDSSCVLYDIRGSR--PLQTFKPHTADVRSIHLDHY--TTE------------------------AGTRQGSPVS 52 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~------------------------~~~~~~~~i~ 52 (125)
|++|+.|+.|++||+.+++ ....+..|..+|.++.|++. ... ....+...+.
T Consensus 70 l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~ 149 (753)
T 3jro_A 70 LASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVN 149 (753)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEE
T ss_pred EEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceE
Confidence 5799999999999999886 66777889999999999864 211 1124567899
Q ss_pred EEEECC-------------CCCEEEEEeCCCcEEEEEcCCC----ceeEEeCCCCCceeEEEEccC---CCeEEEeecCC
Q psy14458 53 ALCVDP-------------SGRLMVSGHEDSSCVLYDIRGS----RPLQTFKPHTADVRSIRFSPS---AYYLLTGGYDN 112 (125)
Q Consensus 53 ~~~~~~-------------~~~~~~~~~~~~~i~~~d~~~~----~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~d~ 112 (125)
+++|+| ++.++++|+.||.|++||++++ .....+..|...|.+++|+|+ +.++++++.|+
T Consensus 150 ~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg 229 (753)
T 3jro_A 150 SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR 229 (753)
T ss_dssp EEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSS
T ss_pred EEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCC
Confidence 999999 4899999999999999999876 456677889999999999999 89999999999
Q ss_pred eEEEEeCCCC
Q psy14458 113 KLVLTDLQGT 122 (125)
Q Consensus 113 ~i~~~~~~~~ 122 (125)
.|++||++++
T Consensus 230 ~I~iwd~~~~ 239 (753)
T 3jro_A 230 TCIIWTQDNE 239 (753)
T ss_dssp CEEEEEESSS
T ss_pred EEEEecCCCC
Confidence 9999999875
No 93
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.84 E-value=2.1e-19 Score=116.92 Aligned_cols=121 Identities=18% Similarity=0.305 Sum_probs=101.8
Q ss_pred CeeecCCCeEEEEECCCC---cceeeecCCCCCeEEEEecCcccc------------------------cccCCCCCeEE
Q psy14458 1 MVSGHEDSSCVLYDIRGS---RPLQTFKPHTADVRSIHLDHYTTE------------------------AGTRQGSPVSA 53 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~---~~~~~~~~~~~~i~~~~~~~~~~~------------------------~~~~~~~~i~~ 53 (125)
|++++.|+.|++||++++ +.+..+..|..+|+++.|++.... ....|...|.+
T Consensus 247 l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~ 326 (430)
T 2xyi_A 247 FGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ 326 (430)
T ss_dssp EEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEE
T ss_pred EEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEE
Confidence 478999999999999987 567777789999999999763221 11246788999
Q ss_pred EEECCCC-CEEEEEeCCCcEEEEEcCC--------------CceeEEeCCCCCceeEEEEccCCC-eEEEeecCCeEEEE
Q psy14458 54 LCVDPSG-RLMVSGHEDSSCVLYDIRG--------------SRPLQTFKPHTADVRSIRFSPSAY-YLLTGGYDNKLVLT 117 (125)
Q Consensus 54 ~~~~~~~-~~~~~~~~~~~i~~~d~~~--------------~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~d~~i~~~ 117 (125)
++|+|++ .++++++.|+.|++||+.. .+.+..+.+|...|.+++|+|++. ++++++.|+.|++|
T Consensus 327 i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw 406 (430)
T 2xyi_A 327 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVW 406 (430)
T ss_dssp EEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEE
T ss_pred EEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEe
Confidence 9999998 4799999999999999986 356777778999999999999998 89999999999999
Q ss_pred eCCC
Q psy14458 118 DLQG 121 (125)
Q Consensus 118 ~~~~ 121 (125)
++..
T Consensus 407 ~~~~ 410 (430)
T 2xyi_A 407 QMAE 410 (430)
T ss_dssp EECH
T ss_pred Eccc
Confidence 9864
No 94
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.84 E-value=1.5e-19 Score=114.48 Aligned_cols=113 Identities=9% Similarity=0.036 Sum_probs=84.8
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCC-eEEEEecCcccccccCCCCCeEEEEECC--CCCEEEEEeCCCcEEEEEc
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTAD-VRSIHLDHYTTEAGTRQGSPVSALCVDP--SGRLMVSGHEDSSCVLYDI 77 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~i~~~d~ 77 (125)
+++++.|++|++|+......+..+ .... +... ...+...|.+++++| +++++++++.|+.|++||+
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~--~~~~~~~~~---------~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~ 156 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDS--KTNKVLREI---------EVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSY 156 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEET--TTCCEEEEE---------ECCCSSCEEEEECCC---CCEEEEEETTCCEEEEES
T ss_pred eEEecCCCeEEEEEccCceEEeec--CCcceeEEe---------ecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEEC
Confidence 478999999999987642211111 1111 1110 012236799999999 9999999999999999999
Q ss_pred CCCceeEEeC-CCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCCC
Q psy14458 78 RGSRPLQTFK-PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTMR 124 (125)
Q Consensus 78 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~ 124 (125)
++++...... .+...+.+++|+|++.++++|+.|+.|++||++++..
T Consensus 157 ~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~ 204 (343)
T 3lrv_A 157 EDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQ 204 (343)
T ss_dssp SSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTS
T ss_pred CCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCC
Confidence 9988876664 4556899999999999999999999999999987653
No 95
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.84 E-value=6.5e-20 Score=115.78 Aligned_cols=122 Identities=22% Similarity=0.347 Sum_probs=97.6
Q ss_pred CeeecCCCeEEEEECCCCc-ceeeecCCCC----CeEEEEe----cCcc---------------------cccccCCCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSR-PLQTFKPHTA----DVRSIHL----DHYT---------------------TEAGTRQGSP 50 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~-~~~~~~~~~~----~i~~~~~----~~~~---------------------~~~~~~~~~~ 50 (125)
|++++.|+.|++||+..++ .+..+..+.. .+.++.+ ++.. ......+...
T Consensus 132 l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 211 (357)
T 3i2n_A 132 IVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNG 211 (357)
T ss_dssp EEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSC
T ss_pred EEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCc
Confidence 5789999999999999886 6666655443 7777773 2211 1111246688
Q ss_pred eEEEEECC---CCCEEEEEeCCCcEEEEEcCCCceeEEeC-----CCCCceeEEEEccCCC-eEEEeecCCeEEEEeCCC
Q psy14458 51 VSALCVDP---SGRLMVSGHEDSSCVLYDIRGSRPLQTFK-----PHTADVRSIRFSPSAY-YLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 51 i~~~~~~~---~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-----~~~~~v~~~~~~~~~~-~~~~~~~d~~i~~~~~~~ 121 (125)
+.+++|+| ++.++++++.||.|++||+++++....+. .|...|.+++|+|++. ++++++.|+.|++||++.
T Consensus 212 v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 291 (357)
T 3i2n_A 212 VCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEY 291 (357)
T ss_dssp EEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEEC
T ss_pred eEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCC
Confidence 99999999 89999999999999999998866554443 8999999999999998 899999999999999875
Q ss_pred C
Q psy14458 122 T 122 (125)
Q Consensus 122 ~ 122 (125)
.
T Consensus 292 ~ 292 (357)
T 3i2n_A 292 P 292 (357)
T ss_dssp C
T ss_pred C
Confidence 4
No 96
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.84 E-value=2.7e-19 Score=114.97 Aligned_cols=121 Identities=12% Similarity=0.123 Sum_probs=106.7
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccc----------------------ccccCCCCCeEEEEECC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTT----------------------EAGTRQGSPVSALCVDP 58 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~----------------------~~~~~~~~~i~~~~~~~ 58 (125)
+++++.|+.|++||+.+++.+..+..|..+|.++.|.+... .....+...+.+++|+|
T Consensus 220 ~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~ 299 (425)
T 1r5m_A 220 FVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVG 299 (425)
T ss_dssp EEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEET
T ss_pred EEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECC
Confidence 47889999999999999999888989999999999865321 11124678899999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
++ ++++++.|+.|++||+.+++.+..+..|...|.+++|+|+++++++++.|+.|++||+++.
T Consensus 300 ~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~ 362 (425)
T 1r5m_A 300 DD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKL 362 (425)
T ss_dssp TT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHH
T ss_pred CC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCC
Confidence 99 9999999999999999999999999999999999999999999999999999999998753
No 97
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.84 E-value=2e-20 Score=118.06 Aligned_cols=103 Identities=19% Similarity=0.279 Sum_probs=87.6
Q ss_pred CeeecCCCeEEEEECCCCcceeeec-----CCCCCeEEEEecCcccccccCCCCCeEEEEECCCCC-EEEEEeCCCcEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFK-----PHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGR-LMVSGHEDSSCVL 74 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~i~~ 74 (125)
|++++.|+.|++||+++++....+. .|. ..|.+++|+|++. ++++++.||.|++
T Consensus 227 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~--------------------~~v~~~~~~~~~~~~l~~~~~dg~i~i 286 (357)
T 3i2n_A 227 LVATSLEGKFHVFDMRTQHPTKGFASVSEKAHK--------------------STVWQVRHLPQNRELFLTAGGAGGLHL 286 (357)
T ss_dssp EEEEESTTEEEEEEEEEEETTTEEEEEEEECCS--------------------SCEEEEEEETTEEEEEEEEETTSEEEE
T ss_pred EEEECCCCeEEEEeCcCCCcccceeeeccCCCc--------------------CCEEEEEECCCCCcEEEEEeCCCcEEE
Confidence 5789999999999998876655543 455 7889999999988 8999999999999
Q ss_pred EEcCCC-------------------ceeEEeCCCCCceeEEEEccCCCeEE-EeecCCeEEEEeCCCCC
Q psy14458 75 YDIRGS-------------------RPLQTFKPHTADVRSIRFSPSAYYLL-TGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 75 ~d~~~~-------------------~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~d~~i~~~~~~~~~ 123 (125)
||++.+ +.+..+..|...|.+++|+|++++++ +++.|+.|++||+.+..
T Consensus 287 wd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 287 WKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred eecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 999753 35667778999999999999999998 89999999999998754
No 98
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.84 E-value=3.1e-19 Score=116.17 Aligned_cols=118 Identities=16% Similarity=0.319 Sum_probs=88.0
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccc-----------------------ccccCCCCCeEEEEEC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTT-----------------------EAGTRQGSPVSALCVD 57 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-----------------------~~~~~~~~~i~~~~~~ 57 (125)
|++|+.|+.|++||+.+++.+..+.+|...|.++.|++... .....+...+.++++
T Consensus 186 l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~- 264 (435)
T 1p22_A 186 IITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF- 264 (435)
T ss_dssp EEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE-
T ss_pred EEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe-
Confidence 46778888888888877777777777777777777654211 112245567777777
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 58 PSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 58 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+++++++++.||.|++||+++++.+..+..|...|.++.+ ++.++++|+.|+.|++||++++
T Consensus 265 -~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~ 326 (435)
T 1p22_A 265 -DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECG 326 (435)
T ss_dssp -ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTC
T ss_pred -CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCC
Confidence 6678888888888888888888888888888888888877 4668888888888888888765
No 99
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.84 E-value=2e-20 Score=118.30 Aligned_cols=114 Identities=14% Similarity=0.147 Sum_probs=85.9
Q ss_pred CeeecCCCeEEEEECCCCcce-eeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCC--CCEEEEEeCCCcEEEEEc
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPL-QTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPS--GRLMVSGHEDSSCVLYDI 77 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~i~~~d~ 77 (125)
|++++.|+.|++||+.++... ..+..+...+..+. ....+...+.+++|+|+ +.++++++.||.|++||+
T Consensus 244 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~ 316 (366)
T 3k26_A 244 ILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILG-------RFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDL 316 (366)
T ss_dssp EEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEE-------EEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEEC
T ss_pred EEEEecCCEEEEEeCCCccccccccccCCcchheec-------cccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEEC
Confidence 578999999999999876542 22222222211111 11123367889999999 999999999999999999
Q ss_pred CCCc----eeEEeCCC--CCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 78 RGSR----PLQTFKPH--TADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 78 ~~~~----~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
.+++ ....+..| ...|.+++|+|++++|++++.|+.|++||+.+
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 317 EVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp CSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 9875 34467766 78999999999999999999999999999864
No 100
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.84 E-value=9.2e-20 Score=114.68 Aligned_cols=122 Identities=16% Similarity=0.158 Sum_probs=101.3
Q ss_pred CeeecCCCeEEEEECCC---------CcceeeecCCCCCeEEEEecCcccc-----------------------cccCCC
Q psy14458 1 MVSGHEDSSCVLYDIRG---------SRPLQTFKPHTADVRSIHLDHYTTE-----------------------AGTRQG 48 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~---------~~~~~~~~~~~~~i~~~~~~~~~~~-----------------------~~~~~~ 48 (125)
|++++.|+.|++||+++ ++++..+. +...+.++.|.+.... ....+.
T Consensus 115 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~ 193 (342)
T 1yfq_A 115 LIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLK 193 (342)
T ss_dssp EEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCS
T ss_pred EEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCcEEEEeCCCeEEEEECCccccccceeeecCCC
Confidence 57899999999999987 76666666 7788888887643211 112445
Q ss_pred CCeEEEEECC-CCCEEEEEeCCCcEEEEEcCCC------ceeEEeCCCCC---------ceeEEEEccCCCeEEEeecCC
Q psy14458 49 SPVSALCVDP-SGRLMVSGHEDSSCVLYDIRGS------RPLQTFKPHTA---------DVRSIRFSPSAYYLLTGGYDN 112 (125)
Q Consensus 49 ~~i~~~~~~~-~~~~~~~~~~~~~i~~~d~~~~------~~~~~~~~~~~---------~v~~~~~~~~~~~~~~~~~d~ 112 (125)
..+.+++|+| ++.++++++.+|.+++|++... +....+..|.. .|.+++|+|++++|++++.|+
T Consensus 194 ~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 273 (342)
T 1yfq_A 194 YQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDG 273 (342)
T ss_dssp SCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTS
T ss_pred CceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCc
Confidence 6899999999 9999999999999999999876 77777887765 899999999999999999999
Q ss_pred eEEEEeCCCCC
Q psy14458 113 KLVLTDLQGTM 123 (125)
Q Consensus 113 ~i~~~~~~~~~ 123 (125)
.|++||++++.
T Consensus 274 ~i~vwd~~~~~ 284 (342)
T 1yfq_A 274 IISCWNLQTRK 284 (342)
T ss_dssp CEEEEETTTTE
T ss_pred eEEEEcCccHh
Confidence 99999998653
No 101
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.83 E-value=7.9e-20 Score=118.95 Aligned_cols=119 Identities=15% Similarity=0.274 Sum_probs=98.5
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccc--------------------cccCCCCCeEEEEECCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTE--------------------AGTRQGSPVSALCVDPSG 60 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~--------------------~~~~~~~~i~~~~~~~~~ 60 (125)
|++|+.|+.|++||+++++.+..+.+|...|.++.+++.... ....|...+.++++ ++
T Consensus 269 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~ 346 (435)
T 1p22_A 269 IVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 346 (435)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CS
T ss_pred EEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cC
Confidence 578999999999999999999999999999999988642221 12356778999988 68
Q ss_pred CEEEEEeCCCcEEEEEcCCCc---------eeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 61 RLMVSGHEDSSCVLYDIRGSR---------PLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 61 ~~~~~~~~~~~i~~~d~~~~~---------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.++++|+.||.|++||+.+++ .+..+..|.+.|.+++| ++.++++++.|+.|++||+.+..
T Consensus 347 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~ 416 (435)
T 1p22_A 347 KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDP 416 (435)
T ss_dssp SEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-----
T ss_pred CEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCC
Confidence 899999999999999997655 78888899999999999 78899999999999999997654
No 102
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.83 E-value=3.6e-19 Score=115.46 Aligned_cols=102 Identities=20% Similarity=0.342 Sum_probs=88.4
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCc
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSR 81 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 81 (125)
++.+.|++|++||+.+++....+..+. +...|++++|+|+++++++|+.||.|++||+.+++
T Consensus 119 lAvgld~tV~lWd~~tg~~~~~~~~~~------------------~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~ 180 (420)
T 4gga_A 119 LAVALDNSVYLWSASSGDILQLLQMEQ------------------PGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK 180 (420)
T ss_dssp EEEEETTEEEEEETTTCCEEEEEECCS------------------TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred EEEEeCCEEEEEECCCCCEEEEEEecC------------------CCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCc
Confidence 344569999999999998877665432 22689999999999999999999999999999999
Q ss_pred eeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 82 PLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 82 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.+..+..|...+.++.+ ++.++++|+.|+.+.+||.+...
T Consensus 181 ~~~~~~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~ 220 (420)
T 4gga_A 181 RLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAE 220 (420)
T ss_dssp EEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSS
T ss_pred EEEEEeCCCCceEEEee--CCCEEEEEeCCCceeEeeecccc
Confidence 99999999999998877 56799999999999999987643
No 103
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.83 E-value=5.7e-19 Score=115.06 Aligned_cols=117 Identities=24% Similarity=0.351 Sum_probs=67.9
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccccc--------------------ccCCCCCeEEEEECCCCC
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEA--------------------GTRQGSPVSALCVDPSGR 61 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--------------------~~~~~~~i~~~~~~~~~~ 61 (125)
++|+.|+.|++||+.+++.+..+.+|..+|.++.+++..... ...+...+.++++ ++.
T Consensus 173 ~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~ 250 (445)
T 2ovr_B 173 ISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGR 250 (445)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSS
T ss_pred EEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCC
Confidence 455566666666665555555555555566555554321111 1134455666665 455
Q ss_pred EEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 62 LMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 62 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
++++++.|+.|++||+++++.+..+..|...|.++.| ++.++++++.|+.|++||++++
T Consensus 251 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~ 309 (445)
T 2ovr_B 251 RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETG 309 (445)
T ss_dssp CEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTC
T ss_pred EEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCC
Confidence 6666666666666666666666666666666666666 5566666666666666666544
No 104
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.83 E-value=4.2e-19 Score=110.30 Aligned_cols=119 Identities=18% Similarity=0.249 Sum_probs=101.4
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecC-c--ccc------------------ccc-CCCCCeEEEEECC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDH-Y--TTE------------------AGT-RQGSPVSALCVDP 58 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~-~--~~~------------------~~~-~~~~~i~~~~~~~ 58 (125)
|++++.|+.|++|| .++....+..+..++..+.+.+ . ... ... .+...+.+++|+|
T Consensus 117 l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~ 194 (313)
T 3odt_A 117 VISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVD 194 (313)
T ss_dssp EEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEEEEEECSSCSSCEEEEEEEE
T ss_pred EEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCceEEEEeccCcccEEEEEEcC
Confidence 57899999999999 6777778888999999888743 1 111 011 2778899999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 59 SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 59 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
++. +++++.++.|++||+++++.+..+..|...|.+++|+|++ .+++++.|+.|++||++++.
T Consensus 195 ~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~ 257 (313)
T 3odt_A 195 DGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGS 257 (313)
T ss_dssp TTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCC
T ss_pred CCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCc
Confidence 988 9999999999999999999999999999999999999999 68999999999999998764
No 105
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.83 E-value=1.7e-18 Score=110.92 Aligned_cols=123 Identities=21% Similarity=0.308 Sum_probs=101.8
Q ss_pred CeeecCCCeEEEEECCCCcceeeec-------------CCCCCeEEEEecCc-c--cccc-------------------c
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFK-------------PHTADVRSIHLDHY-T--TEAG-------------------T 45 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~-------------~~~~~i~~~~~~~~-~--~~~~-------------------~ 45 (125)
|++|+.|+.|++||+.++.....+. +|..+|.++.|.+. . .... .
T Consensus 59 l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 138 (408)
T 4a11_B 59 MLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVF 138 (408)
T ss_dssp EEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceec
Confidence 5799999999999999876655443 58899999999762 1 1111 1
Q ss_pred CCCCCeEEEEECCCC---CEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCC-eEEEeecCCeEEEEeCCC
Q psy14458 46 RQGSPVSALCVDPSG---RLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAY-YLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 46 ~~~~~i~~~~~~~~~---~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~d~~i~~~~~~~ 121 (125)
.+...+.++++++.. .++++++.++.|++||+.+++.+..+..|...|.+++|+|++. ++++++.|+.|++||+++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~ 218 (408)
T 4a11_B 139 NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRR 218 (408)
T ss_dssp ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTC
T ss_pred cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCC
Confidence 345678899999854 4999999999999999999999999999999999999999988 588999999999999976
Q ss_pred CC
Q psy14458 122 TM 123 (125)
Q Consensus 122 ~~ 123 (125)
..
T Consensus 219 ~~ 220 (408)
T 4a11_B 219 AS 220 (408)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 106
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.83 E-value=1.7e-19 Score=120.30 Aligned_cols=103 Identities=13% Similarity=0.185 Sum_probs=83.6
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
|++++.|+.|++||... ++..+. |..++ ....+.+++|||+++++++|+.||.|++||+.++
T Consensus 100 LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~---------------~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~ 161 (588)
T 2j04_A 100 MAVLSNNGNVSVFKDNK--MLTNLD-SKGNL---------------SSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKN 161 (588)
T ss_dssp EEEEETTSCEEEEETTE--EEEECC-CSSCS---------------TTTCEEEEEECSSSSCEEEEETTSEEEEEECCCC
T ss_pred EEEEeCCCcEEEEeCCc--eeeecc-CCCcc---------------ccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCC
Confidence 58899999999999544 555555 44211 1136899999999999999999999999999887
Q ss_pred ce-------eEEe----CCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 81 RP-------LQTF----KPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 81 ~~-------~~~~----~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+. +..+ .+|.+.|.+++|+||| +++++.|+++++||+.++.
T Consensus 162 ~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 162 SENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASS 213 (588)
T ss_dssp TTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSS
T ss_pred ccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCc
Confidence 52 5665 5678899999999999 8889999999999997654
No 107
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.83 E-value=2e-19 Score=116.72 Aligned_cols=114 Identities=17% Similarity=0.260 Sum_probs=95.4
Q ss_pred CeeecCCCeEEEEECC---CCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEE--ECCCCCEEEEEeCCCcEEEE
Q psy14458 1 MVSGHEDSSCVLYDIR---GSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALC--VDPSGRLMVSGHEDSSCVLY 75 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~i~~~ 75 (125)
|++++.|+.|++||+. .++....+..+ .+..+.+.+.. +...+.++. +++++.++++++.|+.|++|
T Consensus 126 l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~--~i~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iw 197 (437)
T 3gre_A 126 FAVSSKDGQIIVLKVNHYQQESEVKFLNCE--CIRKINLKNFG------KNEYAVRMRAFVNEEKSLLVALTNLSRVIIF 197 (437)
T ss_dssp EEEEETTSEEEEEEEEEEEETTEEEEEEEE--EEEEEEGGGGS------SCCCEEEEEEEECSSCEEEEEEETTSEEEEE
T ss_pred EEEEeCCCEEEEEEeccccCCceeeccccc--eeEEEEccCcc------cccCceEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 5899999999999995 56665555544 56666665422 336677777 67889999999999999999
Q ss_pred EcCCCceeEEeCC--CCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 76 DIRGSRPLQTFKP--HTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 76 d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
|+++++.+..+.. |...|.+++|+|++.++++++.|+.|++||++++
T Consensus 198 d~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 246 (437)
T 3gre_A 198 DIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFN 246 (437)
T ss_dssp ETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTT
T ss_pred eCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCc
Confidence 9999999998887 8899999999999999999999999999999865
No 108
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.83 E-value=8.2e-19 Score=112.87 Aligned_cols=123 Identities=12% Similarity=0.275 Sum_probs=103.1
Q ss_pred CeeecCCCeEEEEECCC----CcceeeecCCCCCeEEEEecCc-cc-------------------c---------c---c
Q psy14458 1 MVSGHEDSSCVLYDIRG----SRPLQTFKPHTADVRSIHLDHY-TT-------------------E---------A---G 44 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~----~~~~~~~~~~~~~i~~~~~~~~-~~-------------------~---------~---~ 44 (125)
|++++.|+.|++||+.. .+.+..+.+|..+|.++.|.+. .. . . .
T Consensus 82 l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 161 (416)
T 2pm9_A 82 IAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQS 161 (416)
T ss_dssp EEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCS
T ss_pred EEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccc
Confidence 57899999999999987 3467778889999999998642 10 0 0 1
Q ss_pred cCCCCCeEEEEECCC-CCEEEEEeCCCcEEEEEcCCCceeEEeCCC------CCceeEEEEccCC-CeEEEeecCC---e
Q psy14458 45 TRQGSPVSALCVDPS-GRLMVSGHEDSSCVLYDIRGSRPLQTFKPH------TADVRSIRFSPSA-YYLLTGGYDN---K 113 (125)
Q Consensus 45 ~~~~~~i~~~~~~~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~------~~~v~~~~~~~~~-~~~~~~~~d~---~ 113 (125)
..+...+.+++|+|+ +.++++++.|+.|++||+++++.+..+..+ ...|.+++|+|++ .++++++.|+ .
T Consensus 162 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~ 241 (416)
T 2pm9_A 162 MSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPS 241 (416)
T ss_dssp CCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCC
T ss_pred cCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCce
Confidence 235678999999999 789999999999999999999988888866 7889999999987 6899999998 9
Q ss_pred EEEEeCCCCC
Q psy14458 114 LVLTDLQGTM 123 (125)
Q Consensus 114 i~~~~~~~~~ 123 (125)
|++||++++.
T Consensus 242 i~~~d~~~~~ 251 (416)
T 2pm9_A 242 ILIWDLRNAN 251 (416)
T ss_dssp CCEEETTSTT
T ss_pred EEEEeCCCCC
Confidence 9999998753
No 109
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.82 E-value=7e-19 Score=114.65 Aligned_cols=118 Identities=23% Similarity=0.348 Sum_probs=102.9
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccc--------------------cccCCCCCeEEEEECCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTE--------------------AGTRQGSPVSALCVDPSG 60 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~--------------------~~~~~~~~i~~~~~~~~~ 60 (125)
|++|+.|+.|++||+.+++.+..+.+|..+|.++.+++.... ....|...|.+++++ +
T Consensus 132 l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~ 209 (445)
T 2ovr_B 132 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--E 209 (445)
T ss_dssp EEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--T
T ss_pred EEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecCCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--C
Confidence 579999999999999999999999999999999998653221 123567889999985 5
Q ss_pred CEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 61 RLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 61 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+.+++++.||.|++||+.+++.+..+..|...|.++.+ ++.++++++.|+.|++||++++
T Consensus 210 ~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~ 269 (445)
T 2ovr_B 210 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETE 269 (445)
T ss_dssp TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGT
T ss_pred CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCC
Confidence 77999999999999999999999999999999999999 7889999999999999998764
No 110
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.82 E-value=3.6e-20 Score=121.04 Aligned_cols=98 Identities=20% Similarity=0.244 Sum_probs=83.6
Q ss_pred eecCCCeEEEEECCCC--------cc---eeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCC-CCEEEEEeCCC
Q psy14458 3 SGHEDSSCVLYDIRGS--------RP---LQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPS-GRLMVSGHEDS 70 (125)
Q Consensus 3 t~~~d~~i~v~d~~~~--------~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~ 70 (125)
+|+.|+.|++||+.++ +. ...+.+|. ..|.+++|+|+ +.++++++.||
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~--------------------~~V~~v~~~p~~~~~las~s~Dg 172 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAG--------------------GMVIDMKWNPTVPSMVAVCLADG 172 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGG--------------------GSEEEEEECSSCTTEEEEEETTS
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCC--------------------CceEEEEECCCCCCEEEEEECCC
Confidence 7889999999998754 11 12222333 78999999998 78999999999
Q ss_pred cEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 71 SCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 71 ~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
.|++||++++........|...|.+++|+|+|++|++|+.|++|++||++
T Consensus 173 ~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 173 SIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp CEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred eEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 99999999987776666788999999999999999999999999999987
No 111
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.82 E-value=3.7e-19 Score=122.78 Aligned_cols=102 Identities=18% Similarity=0.379 Sum_probs=91.1
Q ss_pred CeeecCCCeEEEEECC--CCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCC--CCEEEEEeCCCcEEEEE
Q psy14458 1 MVSGHEDSSCVLYDIR--GSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPS--GRLMVSGHEDSSCVLYD 76 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~i~~~d 76 (125)
|++|+.|+.|++||+. +++....+.+|. ..|.+++|+|+ +.++++++.||.|++||
T Consensus 24 latg~~dg~I~vwd~~~~~~~~~~~l~~h~--------------------~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd 83 (753)
T 3jro_A 24 LATCSSDKTIKIFEVEGETHKLIDTLTGHE--------------------GPVWRVDWAHPKFGTILASCSYDGKVLIWK 83 (753)
T ss_dssp EEEEETTTEEEEEEEETTEEEEEEEECCCS--------------------SCEEEEEECCTTSCSEEEEEETTSCEEEEE
T ss_pred EEEEECCCcEEEEecCCCCCccceeccCCc--------------------CceEEEEecCCCCCCEEEEEeCCCeEEEEE
Confidence 5789999999999997 345666777777 78899999987 89999999999999999
Q ss_pred cCCCc--eeEEeCCCCCceeEEEEccC--CCeEEEeecCCeEEEEeCCCC
Q psy14458 77 IRGSR--PLQTFKPHTADVRSIRFSPS--AYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 77 ~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+.+++ ....+..|...|.+++|+|+ +..+++++.|+.|++||++++
T Consensus 84 ~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred CCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 99886 67778889999999999998 999999999999999999876
No 112
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.82 E-value=6e-19 Score=114.51 Aligned_cols=106 Identities=19% Similarity=0.279 Sum_probs=83.3
Q ss_pred CeeecCCCeEEEEECCC-CcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCC-CEEEEEeCCCcEEEEEcC
Q psy14458 1 MVSGHEDSSCVLYDIRG-SRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSG-RLMVSGHEDSSCVLYDIR 78 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~d~~ 78 (125)
|++| .|+.|++||++. ++....+.... .....|...|.+++|+|++ .++++++.||.|++||++
T Consensus 192 l~s~-~d~~i~iwd~~~~~~~~~~~~~~~-------------~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 257 (447)
T 3dw8_B 192 YLSA-DDLRINLWHLEITDRSFNIVDIKP-------------ANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMR 257 (447)
T ss_dssp EEEE-CSSEEEEEETTEEEEEEEEEECCC-------------SSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred EEEe-CCCeEEEEECCCCCceeeeeeccc-------------ccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECc
Confidence 4667 799999999984 33333221000 0112233789999999998 999999999999999999
Q ss_pred CCce----eEEeCCCCC------------ceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 79 GSRP----LQTFKPHTA------------DVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 79 ~~~~----~~~~~~~~~------------~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
+++. ...+..|.. .|.+++|+|+++++++++. +.|++||+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 258 ASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNM 315 (447)
T ss_dssp TCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTC
T ss_pred CCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCC
Confidence 9876 778888876 8999999999999999999 9999999986
No 113
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.82 E-value=4.2e-19 Score=118.36 Aligned_cols=114 Identities=9% Similarity=0.098 Sum_probs=92.8
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccc-------------cccCCCCCeEEEEECCCCCEEEEEe
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTE-------------AGTRQGSPVSALCVDPSGRLMVSGH 67 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------------~~~~~~~~i~~~~~~~~~~~~~~~~ 67 (125)
+||++.|++|+ |...++. +.+|...|..+.|.+.... ....+...|.+++|+|+|..+++++
T Consensus 30 iASas~D~TV~--d~~~~~~---l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s 104 (588)
T 2j04_A 30 YLTTFPDISIG--QPKYAKD---INCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLS 104 (588)
T ss_dssp EEECSSSEEEE--EECCCSC---CSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEE
T ss_pred EEEEcCCceee--cccccce---ecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEe
Confidence 58999999999 7555544 4689999999988653311 1113467899999999999999999
Q ss_pred CCCcEEEEEcCCCceeEEeCCCCC-----ceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 68 EDSSCVLYDIRGSRPLQTFKPHTA-----DVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 68 ~~~~i~~~d~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
.||.|++||... .+..+. |.. .|.+++|+|||++|++|+.||+|++||++++
T Consensus 105 ~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~ 161 (588)
T 2j04_A 105 NNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKN 161 (588)
T ss_dssp TTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCC
T ss_pred CCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCC
Confidence 999999999543 566666 665 4999999999999999999999999999876
No 114
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.82 E-value=1.2e-18 Score=120.12 Aligned_cols=123 Identities=20% Similarity=0.301 Sum_probs=105.9
Q ss_pred CeeecCCCeEEEEECCCC-cceeeecCCCCCeEEEEecC-ccc--ccc---------------------cCCCCCeEEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGS-RPLQTFKPHTADVRSIHLDH-YTT--EAG---------------------TRQGSPVSALC 55 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~-~~~--~~~---------------------~~~~~~i~~~~ 55 (125)
|++++.|+.|++||+.++ .....+.+|..+|.++.|++ ... ... ..+...+.+++
T Consensus 112 l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~ 191 (814)
T 3mkq_A 112 VLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVD 191 (814)
T ss_dssp EEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEE
T ss_pred EEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEE
Confidence 578999999999999887 56677888999999999976 211 110 12337899999
Q ss_pred ECC--CCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 56 VDP--SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 56 ~~~--~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
|+| ++.++++++.+|.|++||..+++.+..+..|...|.+++|+|++.++++++.|+.|++||+.++.
T Consensus 192 ~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~ 261 (814)
T 3mkq_A 192 YYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK 261 (814)
T ss_dssp ECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCS
T ss_pred EEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 999 89999999999999999999999999999999999999999999999999999999999998753
No 115
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.81 E-value=2.5e-19 Score=115.50 Aligned_cols=102 Identities=13% Similarity=0.211 Sum_probs=82.1
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCC-CEEEEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSG-RLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~d~~~ 79 (125)
|++|+.|++|++||+.++.++..+..+. ..+.+++|+|++ .++++++.|+.|++||+++
T Consensus 159 las~s~D~tv~~Wd~~~~~~~~~~~~~~--------------------~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t 218 (393)
T 4gq1_A 159 IASVGDDCTLIIWRLTDEGPILAGYPLS--------------------SPGISVQFRPSNPNQLIVGERNGNIRIFDWTL 218 (393)
T ss_dssp EEEEETTSEEEEEEEETTEEEEEEEECS--------------------SCEEEEEEETTEEEEEEEEETTSEEEEEETTC
T ss_pred EEEEECCCeEEEEECCCCceeeeecCCC--------------------CCcEEEEECCCCCceEEecCCCCEEEEEECCC
Confidence 5899999999999998887777766676 678899999987 5899999999999999987
Q ss_pred CceeEE-------------------------eCCCCCceeEEEEc-cCCCeEEEeecCCeEEEEeCCCC
Q psy14458 80 SRPLQT-------------------------FKPHTADVRSIRFS-PSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 80 ~~~~~~-------------------------~~~~~~~v~~~~~~-~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
++.... ...|...+.++.|. |+++.+++++.|+++++||+.++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~ 287 (393)
T 4gq1_A 219 NLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFAN 287 (393)
T ss_dssp CC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---
T ss_pred CcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccC
Confidence 643322 12467788899986 69999999999999999998765
No 116
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.81 E-value=1.7e-19 Score=114.08 Aligned_cols=111 Identities=12% Similarity=0.122 Sum_probs=87.9
Q ss_pred CeeecCCCeEEEEECCCC---cceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEc
Q psy14458 1 MVSGHEDSSCVLYDIRGS---RPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDI 77 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~ 77 (125)
+++++.|+.|++||++.. +....+..|..... ......+...+.+++|+|++.++++++.||.|++||+
T Consensus 231 ~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~ 302 (368)
T 3mmy_A 231 FALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGT--------NTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDK 302 (368)
T ss_dssp EEEEETTSEEEEEESSCSCHHHHSEEEECSEEC------------CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEET
T ss_pred EEEecCCCcEEEEecCCCCccccceeeeeeecccc--------cccccccccceEEEEEecCCCEEEEEccCCeEEEEEC
Confidence 478999999999999887 44556665542100 0000111237999999999999999999999999999
Q ss_pred CCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeC
Q psy14458 78 RGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDL 119 (125)
Q Consensus 78 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~ 119 (125)
.+++.+..+..|...|.+++|+|++++|++++.|+..+.|++
T Consensus 303 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 303 DARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp TTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGG
T ss_pred CCCcEEEEecCCCCCceEEEECCCCCeEEEEecccccccccc
Confidence 999999999999999999999999999999999876555543
No 117
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.81 E-value=2.7e-18 Score=106.96 Aligned_cols=102 Identities=20% Similarity=0.342 Sum_probs=87.4
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCc
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSR 81 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 81 (125)
++.+.|++|++||+.+++++..+..+. |...|.+++|+|+++++++|+.|+.|++||+.+++
T Consensus 39 lAvg~D~tV~iWd~~tg~~~~~~~~~~------------------~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~ 100 (318)
T 4ggc_A 39 LAVALDNSVYLWSASSGDILQLLQMEQ------------------PGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK 100 (318)
T ss_dssp EEEEETTEEEEEETTTCCEEEEEECCS------------------TTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred EEEEeCCEEEEEECCCCCEEEEEEecC------------------CCCeEEEEEECCCCCEEEEEECCCcEEEeecCCce
Confidence 344569999999999999887776433 22789999999999999999999999999999999
Q ss_pred eeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 82 PLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 82 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.+..+..|...+.++.+ ++..+++++.++.+.+|+.....
T Consensus 101 ~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~ 140 (318)
T 4ggc_A 101 RLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAE 140 (318)
T ss_dssp EEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSS
T ss_pred eEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCc
Confidence 99999999988876655 67799999999999999987653
No 118
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.80 E-value=1.6e-19 Score=129.21 Aligned_cols=122 Identities=17% Similarity=0.212 Sum_probs=95.2
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecC---------------------cccccccCCCCCeEEEEECCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDH---------------------YTTEAGTRQGSPVSALCVDPS 59 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~---------------------~~~~~~~~~~~~i~~~~~~~~ 59 (125)
|++++.|+.|++||+.+++......... .+.++.+.+ ........+...+.+++|+|+
T Consensus 1018 l~s~~~dg~i~vwd~~~~~~~~~~~~~~-~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d 1096 (1249)
T 3sfz_A 1018 LISSSEDSVIQVWNWQTGDYVFLQAHQE-TVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSD 1096 (1249)
T ss_dssp EEEECSSSBEEEEETTTTEEECCBCCSS-CEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSS
T ss_pred EEEEcCCCEEEEEECCCCceEEEecCCC-cEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCC
Confidence 4788888888888888775543332222 122222211 112222346688999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 60 GRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 60 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+.++++++.|+.|++||+.+++.+..+..|...|.+++|+|+++++++++.|+.|++||+.++.
T Consensus 1097 ~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~ 1160 (1249)
T 3sfz_A 1097 ATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQ 1160 (1249)
T ss_dssp SSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSC
T ss_pred CCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence 9999999999999999999999998899999999999999999999999999999999998764
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.79 E-value=9.6e-18 Score=106.88 Aligned_cols=119 Identities=12% Similarity=0.072 Sum_probs=91.2
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCC-----------------CCCeEEEEECCCCCEEE
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQ-----------------GSPVSALCVDPSGRLMV 64 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-----------------~~~i~~~~~~~~~~~~~ 64 (125)
++++.|++|++||+.+++.+..+. +..+|.++.+++......... ......+++++ .+++
T Consensus 75 ~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~--~~la 151 (355)
T 3vu4_A 75 FVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSN--GLLV 151 (355)
T ss_dssp EECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEET--TEEE
T ss_pred EEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEc--cEEE
Confidence 568889999999999999888876 566899998876432221100 00233455666 4555
Q ss_pred E--EeCCCcEEEEEcCCCc----------------eeEEeCCCCCceeEEEEccCCCeEEEeecCCe-EEEEeCCCCC
Q psy14458 65 S--GHEDSSCVLYDIRGSR----------------PLQTFKPHTADVRSIRFSPSAYYLLTGGYDNK-LVLTDLQGTM 123 (125)
Q Consensus 65 ~--~~~~~~i~~~d~~~~~----------------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~-i~~~~~~~~~ 123 (125)
. |+.+|.|++||+.+++ .+..+.+|...|.+++|+|+++++++++.|++ |++||++++.
T Consensus 152 ~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~ 229 (355)
T 3vu4_A 152 YSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV 229 (355)
T ss_dssp EEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCC
T ss_pred EeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc
Confidence 5 6899999999998765 26778899999999999999999999999998 9999998764
No 120
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.78 E-value=1.4e-17 Score=108.82 Aligned_cols=98 Identities=15% Similarity=0.197 Sum_probs=86.0
Q ss_pred CeeecCCCeEEEEECCCCcceee-ecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQT-FKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 79 (125)
|++|+.|+.|++||+.+++.+.. +.+|. ..|.+++|+ ++.++++++.|+.|++||+.+
T Consensus 213 l~s~~~d~~i~vwd~~~~~~~~~~~~~h~--------------------~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~ 271 (450)
T 2vdu_B 213 IITSDRDEHIKISHYPQCFIVDKWLFGHK--------------------HFVSSICCG-KDYLLLSAGGDDKIFAWDWKT 271 (450)
T ss_dssp EEEEETTSCEEEEEESCTTCEEEECCCCS--------------------SCEEEEEEC-STTEEEEEESSSEEEEEETTT
T ss_pred EEEEcCCCcEEEEECCCCceeeeeecCCC--------------------CceEEEEEC-CCCEEEEEeCCCeEEEEECCC
Confidence 57899999999999998888776 44666 788999999 999999999999999999999
Q ss_pred CceeEEeCC-------------------------CCCceeEEEEccCCCeEEEee-cCCeEEEEeC
Q psy14458 80 SRPLQTFKP-------------------------HTADVRSIRFSPSAYYLLTGG-YDNKLVLTDL 119 (125)
Q Consensus 80 ~~~~~~~~~-------------------------~~~~v~~~~~~~~~~~~~~~~-~d~~i~~~~~ 119 (125)
++.+..+.. ....|.++.|+|+++++++++ .|+.|++|++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 272 GKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp CCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred CcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 988777652 235688999999999999998 8999999999
No 121
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.77 E-value=4.3e-18 Score=107.05 Aligned_cols=99 Identities=12% Similarity=0.080 Sum_probs=85.4
Q ss_pred CeeecCCCeEEEEECCCCc---ceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCC-EEEEEeCCCcEEEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSR---PLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGR-LMVSGHEDSSCVLYD 76 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~i~~~d 76 (125)
|++++.|+.|++||+..++ ....+..|. ..|.+++|+|++. ++++++.||.|++||
T Consensus 26 l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~--------------------~~v~~~~~~~~~~~~l~~~~~dg~i~~wd 85 (342)
T 1yfq_A 26 LLITSWDGSLTVYKFDIQAKNVDLLQSLRYK--------------------HPLLCCNFIDNTDLQIYVGTVQGEILKVD 85 (342)
T ss_dssp EEEEETTSEEEEEEEETTTTEEEEEEEEECS--------------------SCEEEEEEEESSSEEEEEEETTSCEEEEC
T ss_pred EEEEcCCCeEEEEEeCCCCccccceeeeecC--------------------CceEEEEECCCCCcEEEEEcCCCeEEEEE
Confidence 5789999999999998776 233333455 7899999999999 999999999999999
Q ss_pred c-CCCceeEEeCC--CCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 77 I-RGSRPLQTFKP--HTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 77 ~-~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
+ .+++. ..+.. |...|.+++|+| +..+++++.|+.|++||+++
T Consensus 86 ~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~ 131 (342)
T 1yfq_A 86 LIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRN 131 (342)
T ss_dssp SSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHH
T ss_pred eccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccc
Confidence 9 76654 66777 999999999999 99999999999999999865
No 122
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.77 E-value=9.3e-18 Score=106.18 Aligned_cols=114 Identities=9% Similarity=0.068 Sum_probs=90.3
Q ss_pred eEEEEECCCCcceee-ecCCCCCeEEEEecCcc--cccccCCCCCeEEEEECC---CCCEEEEEeCCCcEEEEEcCCCce
Q psy14458 9 SCVLYDIRGSRPLQT-FKPHTADVRSIHLDHYT--TEAGTRQGSPVSALCVDP---SGRLMVSGHEDSSCVLYDIRGSRP 82 (125)
Q Consensus 9 ~i~v~d~~~~~~~~~-~~~~~~~i~~~~~~~~~--~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~i~~~d~~~~~~ 82 (125)
.+.+|++.+++.+.. ..+|...|+.+.+.+.. ......++..++.++|++ ++..+++++.|++|++||+.++++
T Consensus 136 ~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~ 215 (356)
T 2w18_A 136 IKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQL 215 (356)
T ss_dssp EEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCE
T ss_pred eEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcE
Confidence 377888887777766 46788888888886533 444557778899999999 679999999999999999999999
Q ss_pred eEEeCCCCC---ceeEEEEccCCCeE------------EEeecCCeEEEEeCCCC
Q psy14458 83 LQTFKPHTA---DVRSIRFSPSAYYL------------LTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 83 ~~~~~~~~~---~v~~~~~~~~~~~~------------~~~~~d~~i~~~~~~~~ 122 (125)
+..+..|.. .+.+++|+|+|.++ ++|+.|+++++||..++
T Consensus 216 l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tg 270 (356)
T 2w18_A 216 LKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTT 270 (356)
T ss_dssp EEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTT
T ss_pred EEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCC
Confidence 999986543 56778999999876 56788999999998866
No 123
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.73 E-value=2.9e-16 Score=100.51 Aligned_cols=100 Identities=12% Similarity=0.208 Sum_probs=85.3
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEE-EEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLM-VSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~i~~~d~~~ 79 (125)
+++++.|+.|++||+.+++.+..+..+. .+.+++|+|+++++ ++++.++.|++||+.+
T Consensus 5 ~vs~~~d~~v~v~d~~~~~~~~~~~~~~---------------------~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~ 63 (391)
T 1l0q_A 5 YIANSESDNISVIDVTSNKVTATIPVGS---------------------NPMGAVISPDGTKVYVANAHSNDVSIIDTAT 63 (391)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECSS---------------------SEEEEEECTTSSEEEEEEGGGTEEEEEETTT
T ss_pred EEEcCCCCEEEEEECCCCeEEEEeecCC---------------------CcceEEECCCCCEEEEECCCCCeEEEEECCC
Confidence 4789999999999999998888777553 57899999999876 6777999999999999
Q ss_pred CceeEEeCCCCCceeEEEEccCCCeEEE-eecCCeEEEEeCCCC
Q psy14458 80 SRPLQTFKPHTADVRSIRFSPSAYYLLT-GGYDNKLVLTDLQGT 122 (125)
Q Consensus 80 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~d~~i~~~~~~~~ 122 (125)
++.+..+..+. .+.+++|+|++++++. ++.++.|++||+.++
T Consensus 64 ~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~ 106 (391)
T 1l0q_A 64 NNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN 106 (391)
T ss_dssp TEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred CeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCC
Confidence 99888887544 8999999999997755 556799999999875
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.70 E-value=2.8e-16 Score=101.76 Aligned_cols=102 Identities=13% Similarity=0.155 Sum_probs=87.0
Q ss_pred CeeecCCCeEEEEECCCCcceeee-----cCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEE
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTF-----KPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLY 75 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~ 75 (125)
+++++.|+.|++||+.+++....+ .+|. ..+.+++|++++.++++++.++.|++|
T Consensus 137 ~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~--------------------~~v~~~~~~~~~~~~~s~~~d~~v~~~ 196 (433)
T 3bws_A 137 AIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKL--------------------GFVETISIPEHNELWVSQMQANAVHVF 196 (433)
T ss_dssp EEEBTTSSSEEEEETTTCCEEEECCCHHHHTTC--------------------CEEEEEEEGGGTEEEEEEGGGTEEEEE
T ss_pred EEEeCCCCeEEEEECCCCeEeeecCcccccccC--------------------CceeEEEEcCCCEEEEEECCCCEEEEE
Confidence 367788899999999988776532 2344 688999999999999999999999999
Q ss_pred EcCCCceeEEeCCCCCceeEEEEccCCCeEE-EeecCCeEEEEeCCCC
Q psy14458 76 DIRGSRPLQTFKPHTADVRSIRFSPSAYYLL-TGGYDNKLVLTDLQGT 122 (125)
Q Consensus 76 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~d~~i~~~~~~~~ 122 (125)
|+.+++.+..+..|...+.+++|+|+++.++ +++.|+.|++||++++
T Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~ 244 (433)
T 3bws_A 197 DLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTK 244 (433)
T ss_dssp ETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred ECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCC
Confidence 9999998888888899999999999998775 5557999999999765
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.69 E-value=3.5e-15 Score=95.49 Aligned_cols=119 Identities=11% Similarity=0.192 Sum_probs=94.9
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCccccc--c--------------------cCCCCCeEEEEECCC
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEA--G--------------------TRQGSPVSALCVDPS 59 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~--------------------~~~~~~i~~~~~~~~ 59 (125)
++++.|+.|++||+.+++.+..+..+. .+..+.|.+..... . ......+.+++|+|+
T Consensus 48 ~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~d 126 (391)
T 1l0q_A 48 VANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPD 126 (391)
T ss_dssp EEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTT
T ss_pred EECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCC
Confidence 577899999999999998888777544 88888886532211 0 123356889999999
Q ss_pred CCEE-EEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeE-EEeecCCeEEEEeCCCC
Q psy14458 60 GRLM-VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYL-LTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 60 ~~~~-~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~d~~i~~~~~~~~ 122 (125)
++.+ ++++.++.|++||+.+++....+..+ ..+.++.|+|+++.+ ++++.++.|++||++++
T Consensus 127 g~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~ 190 (391)
T 1l0q_A 127 GKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN 190 (391)
T ss_dssp SSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred CCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 9877 78888999999999999888887754 456899999999877 67778999999999875
No 126
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.68 E-value=7.3e-16 Score=98.61 Aligned_cols=107 Identities=9% Similarity=0.085 Sum_probs=75.0
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEE--EeCCCcEEEEEcCC
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVS--GHEDSSCVLYDIRG 79 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~i~~~d~~~ 79 (125)
++++.|+.+++|++........+. ....+ .....+...+.+++|+|+++++++ ++.|+.|++||+.+
T Consensus 98 ~s~~~d~~~r~~~~~~~~~~~~~~------~~~~~-----~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~ 166 (365)
T 4h5i_A 98 TQGKGNKHLRKFKYDKVNDQLEFL------TSVDF-----DASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSD 166 (365)
T ss_dssp HHTSCCCCEEEEEEETTTTEEEEE------EEECS-----SCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTT
T ss_pred EEecCCCcEEEEEecCCCceEEEe------eeece-----eecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCC
Confidence 356678889999886543321111 00000 001112256889999999998765 45789999999999
Q ss_pred CceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 80 SRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 80 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
++.+..+. |...|.+++|+|||+++++++.++. .+|+..+
T Consensus 167 ~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~~-~~~~~~~ 206 (365)
T 4h5i_A 167 LTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSSL-EVISTVT 206 (365)
T ss_dssp TEEEEEEE-CSSCCCEEEECTTSSEEEEECSSCE-EEEETTT
T ss_pred CcEEEEeC-CCCceEEEEEccCCceEEeccceeE-EEEEecc
Confidence 99988887 7788999999999999999986654 5555443
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.67 E-value=4.1e-15 Score=96.31 Aligned_cols=101 Identities=14% Similarity=0.096 Sum_probs=86.2
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEE-EEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMV-SGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~i~~~d~~~ 79 (125)
+++++.|+.|++||+++++.+..+..+. ..+.+++|+|++..++ ++..++.|++||+.+
T Consensus 184 ~~s~~~d~~v~~~d~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~ 243 (433)
T 3bws_A 184 WVSQMQANAVHVFDLKTLAYKATVDLTG--------------------KWSKILLYDPIRDLVYCSNWISEDISVIDRKT 243 (433)
T ss_dssp EEEEGGGTEEEEEETTTCCEEEEEECSS--------------------SSEEEEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred EEEECCCCEEEEEECCCceEEEEEcCCC--------------------CCeeEEEEcCCCCEEEEEecCCCcEEEEECCC
Confidence 4788999999999999988888777666 6789999999998775 555899999999999
Q ss_pred CceeEEeCCCCCceeEEEEccCCCeEEEee--------cCCeEEEEeCCCC
Q psy14458 80 SRPLQTFKPHTADVRSIRFSPSAYYLLTGG--------YDNKLVLTDLQGT 122 (125)
Q Consensus 80 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--------~d~~i~~~~~~~~ 122 (125)
++.+..+.. ...+.+++|+|+++.+++++ .|+.|++||++++
T Consensus 244 ~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~ 293 (433)
T 3bws_A 244 KLEIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKE 293 (433)
T ss_dssp TEEEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTT
T ss_pred CcEEEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCC
Confidence 988887774 45589999999999998887 4889999999865
No 128
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.67 E-value=1.8e-15 Score=98.89 Aligned_cols=101 Identities=15% Similarity=0.237 Sum_probs=79.2
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
|++++.|++|++||++++.......+|. ..+.+++|+|+++++++|+.||.|++||.+ +
T Consensus 165 las~s~Dg~v~iwD~~~~~~~~~~~~~~--------------------~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~ 223 (434)
T 2oit_A 165 VAVCLADGSIAVLQVTETVKVCATLPST--------------------VAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-L 223 (434)
T ss_dssp EEEEETTSCEEEEEESSSEEEEEEECGG--------------------GCEEEEEECTTSSCEEEEETTSCEEEECTT-C
T ss_pred EEEEECCCeEEEEEcCCCcceeeccCCC--------------------CceeEEEEcCCCCEEEEEcCCCcEEEEccC-C
Confidence 5789999999999999886554444454 688999999999999999999999999998 5
Q ss_pred ceeEEeCCC-------CCceeEEEEccCCCeEEEe-ecCC------eEEEEeCCCC
Q psy14458 81 RPLQTFKPH-------TADVRSIRFSPSAYYLLTG-GYDN------KLVLTDLQGT 122 (125)
Q Consensus 81 ~~~~~~~~~-------~~~v~~~~~~~~~~~~~~~-~~d~------~i~~~~~~~~ 122 (125)
+....+..+ ...|.++.|++++.++++. +.|| .+++|++++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 224 QEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp CEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred cccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 555545433 2378999999988877553 3443 3899999764
No 129
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.60 E-value=5.7e-14 Score=94.17 Aligned_cols=100 Identities=17% Similarity=0.242 Sum_probs=86.5
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEc--C
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDI--R 78 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~--~ 78 (125)
+++++.|++|.+||..+++.+..+.... .+..++++|+++++++++.++.|++||+ .
T Consensus 152 ~vs~~~d~~V~v~D~~t~~~~~~i~~g~---------------------~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~ 210 (543)
T 1nir_A 152 SVTLRDAGQIALVDGDSKKIVKVIDTGY---------------------AVHISRMSASGRYLLVIGRDARIDMIDLWAK 210 (543)
T ss_dssp EEEEGGGTEEEEEETTTCCEEEEEECST---------------------TEEEEEECTTSCEEEEEETTSEEEEEETTSS
T ss_pred EEEEcCCCeEEEEECCCceEEEEEecCc---------------------ccceEEECCCCCEEEEECCCCeEEEEECcCC
Confidence 4678889999999999999888876432 3778999999999999999999999999 7
Q ss_pred CCceeEEeCCCCCceeEEEEcc----CCCeEEEeec-CCeEEEEeCCCC
Q psy14458 79 GSRPLQTFKPHTADVRSIRFSP----SAYYLLTGGY-DNKLVLTDLQGT 122 (125)
Q Consensus 79 ~~~~~~~~~~~~~~v~~~~~~~----~~~~~~~~~~-d~~i~~~~~~~~ 122 (125)
+++.+..+. +...+.+++|+| +|+++++++. +++|.+||..+.
T Consensus 211 t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~ 258 (543)
T 1nir_A 211 EPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL 258 (543)
T ss_dssp SCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTC
T ss_pred CCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccc
Confidence 888888887 455678999999 9999999885 899999998765
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.58 E-value=8.8e-14 Score=90.40 Aligned_cols=93 Identities=16% Similarity=0.136 Sum_probs=75.2
Q ss_pred CeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCC---cEEEEEcCCCceeE
Q psy14458 8 SSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDS---SCVLYDIRGSRPLQ 84 (125)
Q Consensus 8 ~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---~i~~~d~~~~~~~~ 84 (125)
+.|++||+.. .....+..+. ..+.+++|+|+++.++.++.++ .|++||+.+++...
T Consensus 159 ~~i~i~d~~g-~~~~~l~~~~--------------------~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~ 217 (415)
T 2hqs_A 159 YELRVSDYDG-YNQFVVHRSP--------------------QPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ 217 (415)
T ss_dssp EEEEEEETTS-CSCEEEEEES--------------------SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE
T ss_pred ceEEEEcCCC-CCCEEEeCCC--------------------CcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE
Confidence 7999999874 4455555555 6789999999999999998875 89999999887654
Q ss_pred EeCCCCCceeEEEEccCCCeEE-EeecCCe--EEEEeCCCC
Q psy14458 85 TFKPHTADVRSIRFSPSAYYLL-TGGYDNK--LVLTDLQGT 122 (125)
Q Consensus 85 ~~~~~~~~v~~~~~~~~~~~~~-~~~~d~~--i~~~~~~~~ 122 (125)
+..|...+.+++|+|||+.|+ +++.++. |++||++++
T Consensus 218 -l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~ 257 (415)
T 2hqs_A 218 -VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASG 257 (415)
T ss_dssp -EECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC
T ss_pred -eecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCC
Confidence 556788899999999999887 6665554 999999765
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.56 E-value=4.9e-13 Score=86.91 Aligned_cols=101 Identities=11% Similarity=0.119 Sum_probs=77.5
Q ss_pred CeeecCCC---eEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEE-EEeCCCc--EEE
Q psy14458 1 MVSGHEDS---SCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMV-SGHEDSS--CVL 74 (125)
Q Consensus 1 l~t~~~d~---~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~--i~~ 74 (125)
|++++.|+ .|++||+.+++... +..+. ..+.+++|+|+++.++ +++.++. |++
T Consensus 193 la~~s~~~~~~~i~~~d~~tg~~~~-l~~~~--------------------~~~~~~~~spdg~~la~~~~~~g~~~i~~ 251 (415)
T 2hqs_A 193 LAYVTFESGRSALVIQTLANGAVRQ-VASFP--------------------RHNGAPAFSPDGSKLAFALSKTGSLNLYV 251 (415)
T ss_dssp EEEEECTTSSCEEEEEETTTCCEEE-EECCS--------------------SCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred EEEEEecCCCcEEEEEECCCCcEEE-eecCC--------------------CcccCEEEcCCCCEEEEEEecCCCceEEE
Confidence 35566664 89999998877643 44444 5788999999999777 6666655 999
Q ss_pred EEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeec-CC--eEEEEeCCCCC
Q psy14458 75 YDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGY-DN--KLVLTDLQGTM 123 (125)
Q Consensus 75 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-d~--~i~~~~~~~~~ 123 (125)
||+.+++. ..+..|...+.++.|+|||+.|+.++. ++ .|.+||+.++.
T Consensus 252 ~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~ 302 (415)
T 2hqs_A 252 MDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA 302 (415)
T ss_dssp EETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC
T ss_pred EECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC
Confidence 99988775 456678888999999999999988876 44 68888887653
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.51 E-value=7.8e-13 Score=82.92 Aligned_cols=101 Identities=9% Similarity=0.075 Sum_probs=79.8
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeC-CCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHE-DSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~i~~~d~~~ 79 (125)
+++.+.++.|.+||+.+++....+..+. ... .++|+|++++++.++. ++.|++||..+
T Consensus 13 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~--------------------~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~ 71 (331)
T 3u4y_A 13 IVVEQHLRRISFFSTDTLEILNQITLGY--------------------DFV-DTAITSDCSNVVVTSDFCQTLVQIETQL 71 (331)
T ss_dssp EEEEGGGTEEEEEETTTCCEEEEEECCC--------------------CEE-EEEECSSSCEEEEEESTTCEEEEEECSS
T ss_pred EEEecCCCeEEEEeCcccceeeeEEccC--------------------Ccc-eEEEcCCCCEEEEEeCCCCeEEEEECCC
Confidence 3678889999999999988877666443 455 9999999986666555 88999999998
Q ss_pred Cce-eEEeCCCCCceeEEEEccCCCeEEEeecCC---eEEEEeCCCC
Q psy14458 80 SRP-LQTFKPHTADVRSIRFSPSAYYLLTGGYDN---KLVLTDLQGT 122 (125)
Q Consensus 80 ~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~---~i~~~~~~~~ 122 (125)
++. ...+..+.....++.|+|++++++++..++ .|.+||+.++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~ 118 (331)
T 3u4y_A 72 EPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKN 118 (331)
T ss_dssp SSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTT
T ss_pred CceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCC
Confidence 887 666665666655599999999998655553 8999999765
No 133
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.46 E-value=2e-12 Score=92.14 Aligned_cols=74 Identities=18% Similarity=0.271 Sum_probs=66.4
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCC----------eEEEEe
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDN----------KLVLTD 118 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~----------~i~~~~ 118 (125)
..+..++|+|+++++++++.++.|++||+.+++.......|...+.+++|+|||++++.++.++ .|++||
T Consensus 379 ~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d 458 (1045)
T 1k32_A 379 GNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYD 458 (1045)
T ss_dssp CSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEE
T ss_pred cceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEE
Confidence 6788999999999999999999999999999988777767888999999999999998887654 899999
Q ss_pred CCCC
Q psy14458 119 LQGT 122 (125)
Q Consensus 119 ~~~~ 122 (125)
+.++
T Consensus 459 ~~~g 462 (1045)
T 1k32_A 459 MEGR 462 (1045)
T ss_dssp TTTT
T ss_pred CCCC
Confidence 9765
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.46 E-value=1.2e-12 Score=89.91 Aligned_cols=120 Identities=12% Similarity=0.119 Sum_probs=80.2
Q ss_pred CeeecC-CC-----eEEEEECCCCcceeeecCCCCC--eEEEEecCccccccc--CCCCCeEEEEECCCCCEEEEEeCCC
Q psy14458 1 MVSGHE-DS-----SCVLYDIRGSRPLQTFKPHTAD--VRSIHLDHYTTEAGT--RQGSPVSALCVDPSGRLMVSGHEDS 70 (125)
Q Consensus 1 l~t~~~-d~-----~i~v~d~~~~~~~~~~~~~~~~--i~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~ 70 (125)
|++++. |+ .|.+||+.+++....+..+... -..+........... .....+..++|+|+++++++++. +
T Consensus 51 la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~-~ 129 (741)
T 2ecf_A 51 VTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG-G 129 (741)
T ss_dssp EEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET-T
T ss_pred EEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC-C
Confidence 355666 77 8999999988776655433211 000000000000000 00023788999999999999886 9
Q ss_pred cEEEEEcCCCc--eeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 71 SCVLYDIRGSR--PLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 71 ~i~~~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
.|++||+.++. ....+..+...+..+.|+|||+.|+.++ ++.|++||+.++
T Consensus 130 ~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g 182 (741)
T 2ecf_A 130 ELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASG 182 (741)
T ss_dssp EEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTT
T ss_pred cEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCC
Confidence 99999998873 3444666778899999999999999887 468999999765
No 135
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.45 E-value=6.5e-12 Score=79.17 Aligned_cols=110 Identities=10% Similarity=0.043 Sum_probs=83.4
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEe--CCCcEEEEEcCC
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGH--EDSSCVLYDIRG 79 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~i~~~d~~~ 79 (125)
++...++.|.+||+.+++.+..+..+...- ........+.+++++|+++.++.++ .++.|.+||..+
T Consensus 105 v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~ 173 (353)
T 3vgz_A 105 FGNTVNSAVTAIDAKTGEVKGRLVLDDRKR-----------TEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGN 173 (353)
T ss_dssp EEETTTTEEEEEETTTCCEEEEEESCCCCC-----------CSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTT
T ss_pred EEecCCCEEEEEeCCCCeeEEEEecCCCcc-----------ccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCC
Confidence 455667899999998888776665432100 0000002368899999998777665 478899999999
Q ss_pred CceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 80 SRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 80 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
++....+..+...+..+.|+|+++.++.++.++.+.+||+.++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~ 216 (353)
T 3vgz_A 174 IKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADN 216 (353)
T ss_dssp TEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTT
T ss_pred CceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 9988888756666889999999999999999999999998765
No 136
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.44 E-value=3.1e-12 Score=78.45 Aligned_cols=95 Identities=16% Similarity=0.152 Sum_probs=73.2
Q ss_pred eecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC-Cc
Q psy14458 3 SGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRG-SR 81 (125)
Q Consensus 3 t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~-~~ 81 (125)
+++.|+.|++||+.+++...... +. ..+.+++|+|+++++++++ ++.|++||+.+ ++
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~~~~-~~--------------------~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~ 74 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRVVWQ-TP--------------------ELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPS 74 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEEEEE-ES--------------------SCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCS
T ss_pred CCCcceeEEEEeCCCCceeeecc-CC--------------------cceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCC
Confidence 35678999999998877654333 44 6789999999999999886 78999999998 77
Q ss_pred eeEEeCCC-CCceeEEEEccCCCeEEEee--cCCeEEEEeC
Q psy14458 82 PLQTFKPH-TADVRSIRFSPSAYYLLTGG--YDNKLVLTDL 119 (125)
Q Consensus 82 ~~~~~~~~-~~~v~~~~~~~~~~~~~~~~--~d~~i~~~~~ 119 (125)
.......+ ...+.+++|+|++++++.++ .++...+|.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~ 115 (297)
T 2ojh_A 75 PEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLL 115 (297)
T ss_dssp CEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEE
T ss_pred ceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEE
Confidence 66655545 36788999999999999988 3344444443
No 137
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.44 E-value=3.4e-12 Score=80.27 Aligned_cols=102 Identities=10% Similarity=0.037 Sum_probs=80.1
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEE-EEEeCCCcEEEEEcCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLM-VSGHEDSSCVLYDIRG 79 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~i~~~d~~~ 79 (125)
+++++.++.|.+||+.+++.+..+..... ..+..++|+|+++++ ++...++.|.+||+.+
T Consensus 14 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~-------------------~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t 74 (349)
T 1jmx_B 14 MIVTNYPNNLHVVDVASDTVYKSCVMPDK-------------------FGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDT 74 (349)
T ss_dssp EEEEETTTEEEEEETTTTEEEEEEECSSC-------------------CSSCEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred EEEeCCCCeEEEEECCCCcEEEEEecCCC-------------------CCCceeEECCCCCEEEEEeCCCCcEEEEeCCC
Confidence 46788999999999999887776653220 246788999999865 4556789999999999
Q ss_pred CceeEEeCCC------CCceeEEEEccCCCeEEEeecC------------CeEEEEeCCC
Q psy14458 80 SRPLQTFKPH------TADVRSIRFSPSAYYLLTGGYD------------NKLVLTDLQG 121 (125)
Q Consensus 80 ~~~~~~~~~~------~~~v~~~~~~~~~~~~~~~~~d------------~~i~~~~~~~ 121 (125)
++....+... ...+..+.|+|+|+++++++.+ +.|.+||+.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 134 (349)
T 1jmx_B 75 CKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTAD 134 (349)
T ss_dssp TEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGG
T ss_pred CcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCC
Confidence 8877666532 2337889999999999998865 8999999876
No 138
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.44 E-value=3.6e-12 Score=79.71 Aligned_cols=103 Identities=16% Similarity=0.143 Sum_probs=80.1
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCC-CeEEEEECCCCCEE-EEEeCCCcEEEEEcC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGS-PVSALCVDPSGRLM-VSGHEDSSCVLYDIR 78 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~-~~~~~~~~i~~~d~~ 78 (125)
|++++.++.|.+||+.+++.+..+..... . .+..++|+|+++.+ ++...++.|.+||+.
T Consensus 4 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~-------------------~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 64 (337)
T 1pby_B 4 ILAPARPDKLVVIDTEKMAVDKVITIADA-------------------GPTPMVPMVAPGGRIAYATVNKSESLVKIDLV 64 (337)
T ss_dssp EEEEETTTEEEEEETTTTEEEEEEECTTC-------------------TTCCCCEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred EEEcCCCCeEEEEECCCCcEEEEEEcCCC-------------------CCCccceEEcCCCCEEEEEeCCCCeEEEEECC
Confidence 47889999999999999888776653220 1 46788999999765 556667899999999
Q ss_pred CCceeEEeCC-C----CCceeEEEEccCCCeEEEee------------cCCeEEEEeCCCC
Q psy14458 79 GSRPLQTFKP-H----TADVRSIRFSPSAYYLLTGG------------YDNKLVLTDLQGT 122 (125)
Q Consensus 79 ~~~~~~~~~~-~----~~~v~~~~~~~~~~~~~~~~------------~d~~i~~~~~~~~ 122 (125)
+++.+..+.. + ...+..+.|+|++++++++. .++.|.+||+.++
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~ 125 (337)
T 1pby_B 65 TGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETL 125 (337)
T ss_dssp TCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTT
T ss_pred CCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCC
Confidence 9887766652 1 12577899999999888876 5799999999765
No 139
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.44 E-value=6e-13 Score=91.16 Aligned_cols=101 Identities=12% Similarity=0.141 Sum_probs=78.9
Q ss_pred ecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCC---------CcEEE
Q psy14458 4 GHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHED---------SSCVL 74 (125)
Q Consensus 4 ~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---------~~i~~ 74 (125)
.+.|+.|++||+.+++....+..+... ...+..++|||+++++++++.+ +.+++
T Consensus 33 ~~~dg~i~~~d~~~g~~~~~~~~~~~~-----------------~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~ 95 (723)
T 1xfd_A 33 REQKGTVRLWNVETNTSTVLIEGKKIE-----------------SLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL 95 (723)
T ss_dssp CCSSSCEEEBCGGGCCCEEEECTTTTT-----------------TTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred EeCCCCEEEEECCCCcEEEEecccccc-----------------ccccceEEECCCCCEEEEEecCccceeecceeeEEE
Confidence 368899999999998887776654410 0148899999999999998764 77889
Q ss_pred EEcCCCceeEEeC---CCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 75 YDIRGSRPLQTFK---PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 75 ~d~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
||+.+++. ..+. .|...+..++|+|||+.|+.++. +.|++||+.++.
T Consensus 96 ~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~ 145 (723)
T 1xfd_A 96 SKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQ 145 (723)
T ss_dssp EESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSC
T ss_pred EECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCc
Confidence 99988775 3333 34455889999999999999876 789999987653
No 140
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.41 E-value=1.4e-11 Score=77.57 Aligned_cols=99 Identities=11% Similarity=0.109 Sum_probs=79.0
Q ss_pred cCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeE
Q psy14458 5 HEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQ 84 (125)
Q Consensus 5 ~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~ 84 (125)
+.++.|.+||+.+++....+.... ..+.+++|+|+++.++.++.++.+.+||..+++...
T Consensus 161 ~~~~~i~~~d~~~~~~~~~~~~~~--------------------~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~ 220 (353)
T 3vgz_A 161 GKESVIWVVDGGNIKLKTAIQNTG--------------------KMSTGLALDSEGKRLYTTNADGELITIDTADNKILS 220 (353)
T ss_dssp SSSCEEEEEETTTTEEEEEECCCC--------------------TTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEE
T ss_pred CCCceEEEEcCCCCceEEEecCCC--------------------CccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEE
Confidence 357889999998888777665333 456788999999999999999999999999998877
Q ss_pred EeCC----CCCceeEEEEccCCCeEEEee-cCCeEEEEeCCCCC
Q psy14458 85 TFKP----HTADVRSIRFSPSAYYLLTGG-YDNKLVLTDLQGTM 123 (125)
Q Consensus 85 ~~~~----~~~~v~~~~~~~~~~~~~~~~-~d~~i~~~~~~~~~ 123 (125)
.+.. +...+..+.|+|+++.++.++ .++.|.+||+.++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~ 264 (353)
T 3vgz_A 221 RKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN 264 (353)
T ss_dssp EEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC
T ss_pred EEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc
Confidence 6653 345677899999998776665 45999999997653
No 141
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.40 E-value=4.8e-12 Score=84.92 Aligned_cols=102 Identities=12% Similarity=0.117 Sum_probs=81.9
Q ss_pred eeec-CCCeEEEEECCC-------CcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEe------
Q psy14458 2 VSGH-EDSSCVLYDIRG-------SRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGH------ 67 (125)
Q Consensus 2 ~t~~-~d~~i~v~d~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~------ 67 (125)
++++ .|++|.+||..+ ++.+..+..+. .....++++|+++++.+++
T Consensus 386 ~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g--------------------~~~~~v~~~pdg~~l~v~~~~~~~~ 445 (543)
T 1nir_A 386 STSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQG--------------------GGSLFIKTHPKSSHLYVDTTFNPDA 445 (543)
T ss_dssp EEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSC--------------------SCCCCEECCTTCCEEEECCTTCSSH
T ss_pred EeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCC--------------------CCceEEEcCCCCCcEEEecCCCCCc
Confidence 4554 689999999988 67777877766 5667889999999999987
Q ss_pred -CCCcEEEEEcCCCcee-EEe--------CCCCCceeEEEEccCCCeEEEe-----ecCCeEEEEeCCCCC
Q psy14458 68 -EDSSCVLYDIRGSRPL-QTF--------KPHTADVRSIRFSPSAYYLLTG-----GYDNKLVLTDLQGTM 123 (125)
Q Consensus 68 -~~~~i~~~d~~~~~~~-~~~--------~~~~~~v~~~~~~~~~~~~~~~-----~~d~~i~~~~~~~~~ 123 (125)
.+++|.+||+.+++.. ..+ ..+...+.++.|+|+|+.++.+ +.|+.|.+||..++.
T Consensus 446 ~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~ 516 (543)
T 1nir_A 446 RISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK 516 (543)
T ss_dssp HHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred ccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCce
Confidence 2679999999998776 443 3456789999999999988765 247999999998763
No 142
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.40 E-value=1.2e-12 Score=89.88 Aligned_cols=102 Identities=16% Similarity=0.261 Sum_probs=77.4
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeC---------CCcE
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHE---------DSSC 72 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---------~~~i 72 (125)
+..+.|+.|++||+.+++....+..+... ...+.+++|||++++++.++. ++.|
T Consensus 30 ~~~~~d~~i~~~~~~~g~~~~~~~~~~~~-----------------~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i 92 (719)
T 1z68_A 30 LHQSADNNIVLYNIETGQSYTILSNRTMK-----------------SVNASNYGLSPDRQFVYLESDYSKLWRYSYTATY 92 (719)
T ss_dssp EEECTTSCEEEEESSSCCEEEEECHHHHH-----------------TTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred EEEcCCCCEEEEEcCCCcEEEEEcccccc-----------------ccceeeEEECCCCCeEEEEecCceeEEeecceEE
Confidence 34456899999999988876666543200 013789999999999988876 6899
Q ss_pred EEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 73 VLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 73 ~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
++||+.+++.+.... ....+..++|+|||+.|+.+. ++.|++|++.++
T Consensus 93 ~~~d~~~g~~~~~~~-l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g 140 (719)
T 1z68_A 93 YIYDLSNGEFVRGNE-LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGD 140 (719)
T ss_dssp EEEETTTTEECCSSC-CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTS
T ss_pred EEEECCCCcccccee-cCcccccceECCCCCEEEEEE-CCeEEEEeCCCC
Confidence 999999887631111 235688999999999999885 789999999765
No 143
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.39 E-value=2.1e-12 Score=86.81 Aligned_cols=90 Identities=12% Similarity=0.118 Sum_probs=74.8
Q ss_pred CeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCC--cEEEEEcCCCceeEE
Q psy14458 8 SSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDS--SCVLYDIRGSRPLQT 85 (125)
Q Consensus 8 ~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~i~~~d~~~~~~~~~ 85 (125)
..|++||+.+++.. .+..+. ..+..++|+|+|+.++++..++ .|++||+.+++.. .
T Consensus 175 ~~i~~~d~~~g~~~-~l~~~~--------------------~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~ 232 (582)
T 3o4h_A 175 VSLFTSNLSSGGLR-VFDSGE--------------------GSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-D 232 (582)
T ss_dssp EEEEEEETTTCCCE-EECCSS--------------------CEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-E
T ss_pred eEEEEEcCCCCCce-EeecCC--------------------CccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-E
Confidence 67888888776654 344444 5678999999999999888888 8999999988877 6
Q ss_pred eCCCCCceeEEE--------EccCCCeEEEeecCCeEEEEeC
Q psy14458 86 FKPHTADVRSIR--------FSPSAYYLLTGGYDNKLVLTDL 119 (125)
Q Consensus 86 ~~~~~~~v~~~~--------~~~~~~~~~~~~~d~~i~~~~~ 119 (125)
+..|...+..+. |+|||.++++++.|+++++|++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 233 LELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp CCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred ccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 777777777777 9999988899999999999998
No 144
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.39 E-value=1.5e-11 Score=75.33 Aligned_cols=75 Identities=16% Similarity=0.210 Sum_probs=61.9
Q ss_pred CCeEEEEECCCCCEEEEEe-CCCcEEEEEcC-CCceeEEeCCCCCceeEEEEccCCCeEEEeecC-----------CeEE
Q psy14458 49 SPVSALCVDPSGRLMVSGH-EDSSCVLYDIR-GSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYD-----------NKLV 115 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~-~~~~i~~~d~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d-----------~~i~ 115 (125)
..+.+++|+|+++.++.++ .++.+++|++. .+.....+..+...+.++.|+|++++++.++.+ ..|.
T Consensus 173 ~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~ 252 (297)
T 2ojh_A 173 GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQ 252 (297)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEE
T ss_pred CccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEE
Confidence 6788999999999877665 58899999986 455666777788889999999999999888765 5699
Q ss_pred EEeCCCCC
Q psy14458 116 LTDLQGTM 123 (125)
Q Consensus 116 ~~~~~~~~ 123 (125)
+||++++.
T Consensus 253 ~~d~~~~~ 260 (297)
T 2ojh_A 253 LMDMDGGN 260 (297)
T ss_dssp EEETTSCS
T ss_pred EEecCCCC
Confidence 99998754
No 145
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.35 E-value=3.2e-11 Score=75.44 Aligned_cols=103 Identities=14% Similarity=0.197 Sum_probs=77.6
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEe------------CC
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGH------------ED 69 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~------------~~ 69 (125)
+++..++.|.+||+.+++.+..+....... +...+..++|+|++++++.++ .+
T Consensus 50 v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 50 ATVNKSESLVKIDLVTGETLGRIDLSTPEE---------------RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp EEETTTTEEEEEETTTCCEEEEEECCBTTE---------------EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred EEeCCCCeEEEEECCCCCeEeeEEcCCccc---------------ccccccceEECCCCCEEEEEecccccccccccccC
Confidence 456678899999998887766554211000 002456889999999888886 57
Q ss_pred CcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 70 SSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 70 ~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+.|.+||+.+++....+.. ...+.++.|+|++++++.+ ++.+.+||+.++
T Consensus 115 ~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~ 164 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAG 164 (337)
T ss_dssp CEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTT
T ss_pred ceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCC
Confidence 9999999998887777663 4567889999999988877 688999999765
No 146
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.34 E-value=1.1e-11 Score=83.28 Aligned_cols=71 Identities=15% Similarity=0.058 Sum_probs=60.8
Q ss_pred EEEEECCCCCEEEEEeCC----CcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCC--eEEEEeCCCCC
Q psy14458 52 SALCVDPSGRLMVSGHED----SSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDN--KLVLTDLQGTM 123 (125)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~----~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~--~i~~~~~~~~~ 123 (125)
.+++|+|+|+++++++.+ +.|++||+.+++.. .+..|...+..++|+|||+.|+++..++ .|++||+.++.
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~ 229 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGS 229 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCC
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCc
Confidence 688999999999987766 77999999887754 5667888899999999999999877888 89999998754
No 147
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.34 E-value=1.8e-11 Score=87.26 Aligned_cols=99 Identities=12% Similarity=0.188 Sum_probs=81.8
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCC----------
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDS---------- 70 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---------- 70 (125)
|++++.++.|++||+.+++....+..+. ..+..++|+|++++++.++.++
T Consensus 393 la~~~~~~~v~~~d~~tg~~~~~~~~~~--------------------~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~ 452 (1045)
T 1k32_A 393 AVVANDRFEIMTVDLETGKPTVIERSRE--------------------AMITDFTISDNSRFIAYGFPLKHGETDGYVMQ 452 (1045)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECSS--------------------SCCCCEEECTTSCEEEEEEEECSSTTCSCCEE
T ss_pred EEEECCCCeEEEEECCCCceEEeccCCC--------------------CCccceEECCCCCeEEEEecCccccccCCCCC
Confidence 4678889999999999888776665555 5678899999999998877654
Q ss_pred cEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 71 SCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 71 ~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
.|++||+.+++ ...+..|...+..+.|+|||+.++.++.++....|+..
T Consensus 453 ~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 453 AIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp EEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSS
T ss_pred eEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchh
Confidence 89999998877 66677788888999999999999999988877777653
No 148
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.33 E-value=3.1e-11 Score=75.66 Aligned_cols=97 Identities=13% Similarity=0.218 Sum_probs=71.3
Q ss_pred eeecCCCeEEEEECCC-Cc--ceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCC-CcEEEEEc
Q psy14458 2 VSGHEDSSCVLYDIRG-SR--PLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHED-SSCVLYDI 77 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~-~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~i~~~d~ 77 (125)
++++.|+.|++||+.. ++ .+..+. +. ..+.+++|+|+++++++++.+ +.|.+|++
T Consensus 9 ~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~--------------------~~~~~~~~spdg~~l~~~~~~~~~v~~~~~ 67 (343)
T 1ri6_A 9 IASPESQQIHVWNLNHEGALTLTQVVD-VP--------------------GQVQPMVVSPDKRYLYVGVRPEFRVLAYRI 67 (343)
T ss_dssp EEEGGGTEEEEEEECTTSCEEEEEEEE-CS--------------------SCCCCEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred EeCCCCCeEEEEEECCCCcEEEeeeEe-cC--------------------CCCceEEECCCCCEEEEeecCCCeEEEEEe
Confidence 4557899999999853 32 222222 22 567889999999988888776 89999999
Q ss_pred C--CCc--eeEEeCCCCCceeEEEEccCCCeEEEee-cCCeEEEEeCC
Q psy14458 78 R--GSR--PLQTFKPHTADVRSIRFSPSAYYLLTGG-YDNKLVLTDLQ 120 (125)
Q Consensus 78 ~--~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~d~~i~~~~~~ 120 (125)
. +++ .+..+..+. .+..++|+|+++++++++ .++.|.+||+.
T Consensus 68 ~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~ 114 (343)
T 1ri6_A 68 APDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLE 114 (343)
T ss_dssp CTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred cCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECC
Confidence 7 444 334444333 788999999999876665 48899999983
No 149
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.33 E-value=8.2e-11 Score=73.72 Aligned_cols=98 Identities=12% Similarity=0.122 Sum_probs=72.8
Q ss_pred eecCCCeEEEEECCCCcc-eeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCC---cEEEEEcC
Q psy14458 3 SGHEDSSCVLYDIRGSRP-LQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDS---SCVLYDIR 78 (125)
Q Consensus 3 t~~~d~~i~v~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---~i~~~d~~ 78 (125)
++..++.|.+||+.+++. ...+..+. ....+++|+|++++++++..++ .|.+||+.
T Consensus 57 ~~~~~~~i~~~d~~~~~~~~~~~~~~~--------------------~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~ 116 (331)
T 3u4y_A 57 TSDFCQTLVQIETQLEPPKVVAIQEGQ--------------------SSMADVDITPDDQFAVTVTGLNHPFNMQSYSFL 116 (331)
T ss_dssp EESTTCEEEEEECSSSSCEEEEEEECS--------------------SCCCCEEECTTSSEEEECCCSSSSCEEEEEETT
T ss_pred EeCCCCeEEEEECCCCceeEEecccCC--------------------CCccceEECCCCCEEEEecCCCCcccEEEEECC
Confidence 444578899999988776 55554443 3444489999999988655553 89999999
Q ss_pred CCceeEEeCCCCCceeEEEEccCCCeEEEe-ecCCe-EEEEeCCC
Q psy14458 79 GSRPLQTFKPHTADVRSIRFSPSAYYLLTG-GYDNK-LVLTDLQG 121 (125)
Q Consensus 79 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~d~~-i~~~~~~~ 121 (125)
+++.+..+.. .....++.|+|+|++++++ ..++. +.+|++..
T Consensus 117 ~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~ 160 (331)
T 3u4y_A 117 KNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDA 160 (331)
T ss_dssp TTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECT
T ss_pred CCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECC
Confidence 9988877764 3456899999999855554 55678 99999864
No 150
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.31 E-value=6.8e-11 Score=81.34 Aligned_cols=84 Identities=12% Similarity=0.187 Sum_probs=62.6
Q ss_pred CeEEEEECCCCc--ceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEE
Q psy14458 8 SSCVLYDIRGSR--PLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQT 85 (125)
Q Consensus 8 ~~i~v~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~ 85 (125)
+.|.+||+.++. ....+..+. ..+..++|+|++++++.++ ++.|++||+.+++....
T Consensus 129 ~~i~~~d~~~~~~~~~~~l~~~~--------------------~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 129 GELYLYDLKQEGKAAVRQLTHGE--------------------GFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQL 187 (741)
T ss_dssp TEEEEEESSSCSTTSCCBCCCSS--------------------SCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEEC
T ss_pred CcEEEEECCCCCcceEEEcccCC--------------------cccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEe
Confidence 788889988762 333344343 6788999999999999887 46899999988776554
Q ss_pred eCCCCCc----------------eeEEEEccCCCeEEEeecCC
Q psy14458 86 FKPHTAD----------------VRSIRFSPSAYYLLTGGYDN 112 (125)
Q Consensus 86 ~~~~~~~----------------v~~~~~~~~~~~~~~~~~d~ 112 (125)
...+... +..+.|+|||+.|+.++.|+
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred ccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence 4333322 47899999999999988765
No 151
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.31 E-value=3.6e-11 Score=83.09 Aligned_cols=99 Identities=12% Similarity=0.225 Sum_probs=77.5
Q ss_pred CCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCC---------CcEEEEEc
Q psy14458 7 DSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHED---------SSCVLYDI 77 (125)
Q Consensus 7 d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---------~~i~~~d~ 77 (125)
|+.|++||+.++++...+.++.... .......+.|||++++++.++.+ +.+.+||+
T Consensus 35 ~~~i~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~ 99 (740)
T 4a5s_A 35 ENNILVFNAEYGNSSVFLENSTFDE---------------FGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDL 99 (740)
T ss_dssp TTEEEEEETTTCCEEEEECTTTTTT---------------CCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred CCcEEEEECCCCceEEEEechhhhh---------------hcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEEC
Confidence 8999999999998877776654211 00123458999999999998875 56679999
Q ss_pred CCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 78 RGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 78 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
.+++... +..+...+....|+|||+.|+.+ .|+.|++|++.++
T Consensus 100 ~~~~~~~-l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~ 142 (740)
T 4a5s_A 100 NKRQLIT-EERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNL 142 (740)
T ss_dssp TTTEECC-SSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTS
T ss_pred CCCcEEE-cccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCC
Confidence 9887543 55677789999999999999888 5789999998765
No 152
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.29 E-value=7.9e-11 Score=73.78 Aligned_cols=98 Identities=9% Similarity=0.175 Sum_probs=69.0
Q ss_pred eecCCCeEEEEECCCC---cceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEe-CCCcEEEEEcC
Q psy14458 3 SGHEDSSCVLYDIRGS---RPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGH-EDSSCVLYDIR 78 (125)
Q Consensus 3 t~~~d~~i~v~d~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~i~~~d~~ 78 (125)
++..++.|.+||+..+ +....+... ..+.+++|+|+++++++++ .++.|++||+.
T Consensus 101 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~---------------------~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 159 (343)
T 1ri6_A 101 GSYNAGNVSVTRLEDGLPVGVVDVVEGL---------------------DGCHSANISPDNRTLWVPALKQDRICLFTVS 159 (343)
T ss_dssp EETTTTEEEEEEEETTEEEEEEEEECCC---------------------TTBCCCEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred EecCCCeEEEEECCCCccccccccccCC---------------------CCceEEEECCCCCEEEEecCCCCEEEEEEec
Confidence 3445788888888422 233333222 4578899999999887777 88999999998
Q ss_pred C-CceeE----EeC-CCCCceeEEEEccCCCeEEEe-ecCCeEEEEeCCC
Q psy14458 79 G-SRPLQ----TFK-PHTADVRSIRFSPSAYYLLTG-GYDNKLVLTDLQG 121 (125)
Q Consensus 79 ~-~~~~~----~~~-~~~~~v~~~~~~~~~~~~~~~-~~d~~i~~~~~~~ 121 (125)
+ ++... .+. .....+.++.|+|++++++.+ ..++.+.+|++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 160 DDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKD 209 (343)
T ss_dssp TTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSC
T ss_pred CCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 7 54322 222 234568889999999976555 4799999999954
No 153
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.29 E-value=4.5e-10 Score=70.58 Aligned_cols=72 Identities=13% Similarity=0.086 Sum_probs=60.9
Q ss_pred CCeEEEEECC-CCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 49 SPVSALCVDP-SGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 49 ~~i~~~~~~~-~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
..+..++++| ++++++.+ ++.|.+||+.+++.+..+. ....+.+++|+|+++.+++++.++.|.+||+.++.
T Consensus 255 ~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 255 ELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAAN-LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLE 327 (349)
T ss_dssp SCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEE-CSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTE
T ss_pred CcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEc-CCCCccceEECCCCCEEEEecCCCeEEEEeccccc
Confidence 4677889999 99998888 8899999999988877766 33457789999999988888889999999998653
No 154
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.28 E-value=3.3e-11 Score=82.65 Aligned_cols=87 Identities=16% Similarity=0.221 Sum_probs=63.0
Q ss_pred CCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEe
Q psy14458 7 DSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTF 86 (125)
Q Consensus 7 d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~ 86 (125)
++.+.+||+.+++. ..+.... .+...+..++|||+++.++.++. +.|++||+.+++.....
T Consensus 90 ~~~i~~~d~~~~~~-~~l~~~~-----------------~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~ 150 (723)
T 1xfd_A 90 TGYYVLSKIPHGDP-QSLDPPE-----------------VSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVV 150 (723)
T ss_dssp CSEEEEEESSSCCC-EECCCTT-----------------CCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEE
T ss_pred eeeEEEEECCCCce-EeccCCc-----------------cccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEe
Confidence 47888999988765 2222111 01145778999999999999876 78999999888766655
Q ss_pred CCCCCce------------------eEEEEccCCCeEEEeecCC
Q psy14458 87 KPHTADV------------------RSIRFSPSAYYLLTGGYDN 112 (125)
Q Consensus 87 ~~~~~~v------------------~~~~~~~~~~~~~~~~~d~ 112 (125)
..+...+ .++.|+|||+.|+.++.|+
T Consensus 151 ~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~ 194 (723)
T 1xfd_A 151 STGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIND 194 (723)
T ss_dssp CCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEEC
T ss_pred cCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECC
Confidence 5443333 7899999999999987653
No 155
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.28 E-value=8.8e-11 Score=80.45 Aligned_cols=73 Identities=12% Similarity=0.179 Sum_probs=59.8
Q ss_pred CeEEEEECCCCCEEEEEe---------------------------------CCCcEEEEEcCCCceeEEeC--CCCCcee
Q psy14458 50 PVSALCVDPSGRLMVSGH---------------------------------EDSSCVLYDIRGSRPLQTFK--PHTADVR 94 (125)
Q Consensus 50 ~i~~~~~~~~~~~~~~~~---------------------------------~~~~i~~~d~~~~~~~~~~~--~~~~~v~ 94 (125)
.+.+++|+|++++|+.++ .+..|++||+.+++...... .+...+.
T Consensus 182 ~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 261 (706)
T 2z3z_A 182 IEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLT 261 (706)
T ss_dssp CCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEE
T ss_pred CCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEe
Confidence 468899999999999887 44679999998887544332 4667799
Q ss_pred EEEEccCCCeEEEeecCC-----eEEEEeCCCC
Q psy14458 95 SIRFSPSAYYLLTGGYDN-----KLVLTDLQGT 122 (125)
Q Consensus 95 ~~~~~~~~~~~~~~~~d~-----~i~~~~~~~~ 122 (125)
++.|+|||+.++.++.++ .|.+||+.++
T Consensus 262 ~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g 294 (706)
T 2z3z_A 262 NLSWSPDENILYVAEVNRAQNECKVNAYDAETG 294 (706)
T ss_dssp EEEECTTSSEEEEEEECTTSCEEEEEEEETTTC
T ss_pred eEEEECCCCEEEEEEeCCCCCeeEEEEEECCCC
Confidence 999999999999988776 8999999876
No 156
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.25 E-value=6.5e-11 Score=81.10 Aligned_cols=82 Identities=15% Similarity=0.121 Sum_probs=61.9
Q ss_pred CCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC-----C
Q psy14458 6 EDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRG-----S 80 (125)
Q Consensus 6 ~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~-----~ 80 (125)
.|+.|++||+.+++...... +. ..+..++|+|+++.++.+ .++.|++||+.+ +
T Consensus 99 ~~~~i~~~d~~~~~~~~l~~-~~--------------------~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g 156 (706)
T 2z3z_A 99 TQGGLVGFDMLARKVTYLFD-TN--------------------EETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMS 156 (706)
T ss_dssp ETTEEEEEETTTTEEEEEEC-CT--------------------TCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCC
T ss_pred ECCEEEEEECCCCceEEccC-Cc--------------------ccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCC
Confidence 45889999998776544333 33 456778999999999885 679999999988 7
Q ss_pred ceeEEeCCCCCc--------------eeEEEEccCCCeEEEee
Q psy14458 81 RPLQTFKPHTAD--------------VRSIRFSPSAYYLLTGG 109 (125)
Q Consensus 81 ~~~~~~~~~~~~--------------v~~~~~~~~~~~~~~~~ 109 (125)
+.......+... +.++.|+|||++|+.++
T Consensus 157 ~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~ 199 (706)
T 2z3z_A 157 RAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYR 199 (706)
T ss_dssp CCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEE
T ss_pred CcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEE
Confidence 655434333332 47899999999999987
No 157
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.22 E-value=1.6e-10 Score=73.05 Aligned_cols=72 Identities=13% Similarity=0.222 Sum_probs=54.9
Q ss_pred CCeEEEEECCCCCEEEEEe-CCCcEEEEEcCC-C--ceeEEeCC---------CCCceeEEEEccCCCeEEEeecCCeEE
Q psy14458 49 SPVSALCVDPSGRLMVSGH-EDSSCVLYDIRG-S--RPLQTFKP---------HTADVRSIRFSPSAYYLLTGGYDNKLV 115 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~-~~~~i~~~d~~~-~--~~~~~~~~---------~~~~v~~~~~~~~~~~~~~~~~d~~i~ 115 (125)
..+..++|+|+++++++++ .++.+.+|++.. + +.+..+.. ....+.++.|+|+++++++...++.+.
T Consensus 86 ~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~ 165 (347)
T 3hfq_A 86 TPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVY 165 (347)
T ss_dssp CCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred CCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEE
Confidence 5678899999999888877 778999999963 2 23333321 122478899999999777777789999
Q ss_pred EEeCC
Q psy14458 116 LTDLQ 120 (125)
Q Consensus 116 ~~~~~ 120 (125)
+|++.
T Consensus 166 ~~~~~ 170 (347)
T 3hfq_A 166 VYNVS 170 (347)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99987
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.22 E-value=7.2e-10 Score=70.40 Aligned_cols=99 Identities=11% Similarity=0.222 Sum_probs=67.5
Q ss_pred ecCCCeEEEEECCCCcc--eeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCC--CcEEEEEcC-
Q psy14458 4 GHEDSSCVLYDIRGSRP--LQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHED--SSCVLYDIR- 78 (125)
Q Consensus 4 ~~~d~~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~~i~~~d~~- 78 (125)
...++.|.+|++.+++. +..+.... .+......++|+|++++++.+..+ +.|.+|++.
T Consensus 229 ~~~~~~v~v~~~~~g~~~~~~~~~~~~-----------------~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~ 291 (361)
T 3scy_A 229 NEIGGTVIAFRYADGMLDEIQTVAADT-----------------VNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDE 291 (361)
T ss_dssp ETTTCEEEEEEEETTEEEEEEEEESCS-----------------SCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECT
T ss_pred cCCCCeEEEEEecCCceEEeEEEecCC-----------------CCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcC
Confidence 33578888888876543 22221111 111456799999999988766654 889999985
Q ss_pred -CCc--eeEEeCCCCCceeEEEEccCCCeEEEee-cCCeEEEEeCC
Q psy14458 79 -GSR--PLQTFKPHTADVRSIRFSPSAYYLLTGG-YDNKLVLTDLQ 120 (125)
Q Consensus 79 -~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~d~~i~~~~~~ 120 (125)
+++ .+..+.. ...+.+++|+|+|+++++++ .++.+.+|.+.
T Consensus 292 ~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 292 TNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp TTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred CCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 344 3444444 55678999999999888877 67899996543
No 159
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.20 E-value=7.8e-10 Score=69.84 Aligned_cols=72 Identities=11% Similarity=0.223 Sum_probs=56.0
Q ss_pred CCeEEEEECCCCCEE-EEEeCCCcEEEEEcCC---CceeEEeCCCCCceeEEEEccCCCeEEEeec-CCeEEEEeCC
Q psy14458 49 SPVSALCVDPSGRLM-VSGHEDSSCVLYDIRG---SRPLQTFKPHTADVRSIRFSPSAYYLLTGGY-DNKLVLTDLQ 120 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~-~~~~~~~~i~~~d~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-d~~i~~~~~~ 120 (125)
..+..++|+|+++++ ++...++.|.+|++.. .+.+..+..+...+..++|+||+++|++++. ++.+.+|++.
T Consensus 240 ~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 240 NGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 457889999999977 5556689999999863 2445555556667889999999998888775 5899999543
No 160
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.19 E-value=3.1e-10 Score=73.31 Aligned_cols=92 Identities=15% Similarity=0.082 Sum_probs=69.3
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCc
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSR 81 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 81 (125)
+++ .++.|++||+.+.........+. ..+.++.+.+. .++.++.||.|.+||+.++.
T Consensus 101 ~v~-~~~~l~v~dv~sl~~~~~~~~~~--------------------~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~ 157 (388)
T 1xip_A 101 LVS-TRNALYSLDLEELSEFRTVTSFE--------------------KPVFQLKNVNN--TLVILNSVNDLSALDLRTKS 157 (388)
T ss_dssp EEE-ESSEEEEEESSSTTCEEEEEECS--------------------SCEEEEEECSS--EEEEEETTSEEEEEETTTCC
T ss_pred EEE-cCCcEEEEEchhhhccCccceee--------------------cceeeEEecCC--CEEEEECCCCEEEEEccCCc
Confidence 445 88999999998776555555455 33445444433 28888999999999999776
Q ss_pred eeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 82 PLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 82 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
... +...|++++|+|+| ++.|..||++++|+..+.
T Consensus 158 ~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~ 192 (388)
T 1xip_A 158 TKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNG 192 (388)
T ss_dssp EEE----EEESEEEEEECSSE--EEEEETTSCEEEEEEETT
T ss_pred ccc----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCc
Confidence 543 44679999999999 788999999999977654
No 161
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.18 E-value=1.7e-09 Score=68.63 Aligned_cols=72 Identities=14% Similarity=0.226 Sum_probs=55.1
Q ss_pred CCeEEEEECCCCCEEEEEe-CCCcEEEEEcCCCce--eEEeC---CCCCceeEEEEccCCCeEEEeec--CCeEEEEeCC
Q psy14458 49 SPVSALCVDPSGRLMVSGH-EDSSCVLYDIRGSRP--LQTFK---PHTADVRSIRFSPSAYYLLTGGY--DNKLVLTDLQ 120 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~--~~~~~---~~~~~v~~~~~~~~~~~~~~~~~--d~~i~~~~~~ 120 (125)
.....++|+|++++++.++ .++.|.+|++.+++. +..+. .+......++|+|||++++++.. ++.|.+|++.
T Consensus 211 ~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 211 SGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp CCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred CCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 5678899999999887776 689999999987643 22222 23345679999999998866654 5899999985
No 162
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.18 E-value=1.1e-10 Score=80.21 Aligned_cols=83 Identities=17% Similarity=0.355 Sum_probs=59.6
Q ss_pred CCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEe
Q psy14458 7 DSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTF 86 (125)
Q Consensus 7 d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~ 86 (125)
|+.|++||+.+++.+.... -. ..+..++|||+|+.++.+. ++.|++|++.+++.....
T Consensus 89 ~~~i~~~d~~~g~~~~~~~-l~--------------------~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~ 146 (719)
T 1z68_A 89 TATYYIYDLSNGEFVRGNE-LP--------------------RPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQIT 146 (719)
T ss_dssp EEEEEEEETTTTEECCSSC-CC--------------------SSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECC
T ss_pred ceEEEEEECCCCcccccee-cC--------------------cccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEe
Confidence 6889999998876521111 01 3567899999999999885 789999999887654322
Q ss_pred -CCCCCce-----------------eEEEEccCCCeEEEeecC
Q psy14458 87 -KPHTADV-----------------RSIRFSPSAYYLLTGGYD 111 (125)
Q Consensus 87 -~~~~~~v-----------------~~~~~~~~~~~~~~~~~d 111 (125)
.++...+ .++.|+|||+.|+.++.|
T Consensus 147 ~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 147 FNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp CCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEE
T ss_pred cCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEEC
Confidence 2222212 489999999999998865
No 163
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.16 E-value=3.4e-10 Score=72.42 Aligned_cols=95 Identities=9% Similarity=0.088 Sum_probs=74.7
Q ss_pred CCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeC----------CCcEEEE
Q psy14458 6 EDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHE----------DSSCVLY 75 (125)
Q Consensus 6 ~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----------~~~i~~~ 75 (125)
.|+.|.+||..+++.+..+.... .+ .++++|++++++.++. ++.|.+|
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~--------------------~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~ 86 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAF--------------------NG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVW 86 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCE--------------------EE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEE
T ss_pred ccCeEEEEECCCCeEEEEecCCC--------------------CC--ceEECCCCCEEEEEEecccccccCCCCCEEEEE
Confidence 47899999998888776665432 23 8899999999988863 5679999
Q ss_pred EcCCCceeEEeCCC------CCceeEEEEccCCCeEEEeec--CCeEEEEeCCCC
Q psy14458 76 DIRGSRPLQTFKPH------TADVRSIRFSPSAYYLLTGGY--DNKLVLTDLQGT 122 (125)
Q Consensus 76 d~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~~~~--d~~i~~~~~~~~ 122 (125)
|..+.+.+..+... ......+.++|||++++++.. ++.|.+||+.++
T Consensus 87 d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~ 141 (361)
T 2oiz_A 87 DADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKG 141 (361)
T ss_dssp ETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTT
T ss_pred ECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCC
Confidence 99988877766522 245678999999999988874 688999999865
No 164
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.13 E-value=3.2e-09 Score=65.68 Aligned_cols=98 Identities=8% Similarity=0.158 Sum_probs=79.9
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
|++++.|+.|.+||..+++.+..+..+.. ..+.+++++|++++++ +.++.|..||. ++
T Consensus 8 lv~~~~~~~v~~~d~~tG~~~w~~~~~~~-------------------~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G 65 (276)
T 3no2_A 8 LVGGSGWNKIAIINKDTKEIVWEYPLEKG-------------------WECNSVAATKAGEILF--SYSKGAKMITR-DG 65 (276)
T ss_dssp EEECTTCSEEEEEETTTTEEEEEEECCTT-------------------CCCCEEEECTTSCEEE--ECBSEEEEECT-TS
T ss_pred EEeeCCCCEEEEEECCCCeEEEEeCCCcc-------------------CCCcCeEECCCCCEEE--eCCCCEEEECC-CC
Confidence 47889999999999989999988875431 2567889999999888 35778999998 88
Q ss_pred ceeEEeCCCC-CceeEEEEccCCCeEEEeec-CCeEEEEeCC
Q psy14458 81 RPLQTFKPHT-ADVRSIRFSPSAYYLLTGGY-DNKLVLTDLQ 120 (125)
Q Consensus 81 ~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~-d~~i~~~~~~ 120 (125)
+.+..+.... ..+.++.+.|+|+++++.+. ++.+..+|..
T Consensus 66 ~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~ 107 (276)
T 3no2_A 66 RELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMK 107 (276)
T ss_dssp CEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTT
T ss_pred CEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeCC
Confidence 8888888643 46888999999999999887 7777777653
No 165
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.12 E-value=5.5e-09 Score=70.61 Aligned_cols=99 Identities=19% Similarity=0.202 Sum_probs=80.5
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcC--C
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIR--G 79 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~--~ 79 (125)
++...+++|.++|..+++.+..+... .....+.++|+++++++++.++.|.+||+. +
T Consensus 171 V~~~~~~~V~viD~~t~~v~~~i~~g---------------------~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t 229 (567)
T 1qks_A 171 VTLRDAGQIALIDGSTYEIKTVLDTG---------------------YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKE 229 (567)
T ss_dssp EEETTTTEEEEEETTTCCEEEEEECS---------------------SCEEEEEECTTSCEEEEEETTSEEEEEETTSSS
T ss_pred EEeCCCCeEEEEECCCCeEEEEEeCC---------------------CCccceEECCCCCEEEEEcCCCeEEEEECCCCC
Confidence 45677899999999998888777632 356789999999999999999999999995 7
Q ss_pred CceeEEeCCCCCceeEEEEc----cCCCeEEEeec-CCeEEEEeCCCC
Q psy14458 80 SRPLQTFKPHTADVRSIRFS----PSAYYLLTGGY-DNKLVLTDLQGT 122 (125)
Q Consensus 80 ~~~~~~~~~~~~~v~~~~~~----~~~~~~~~~~~-d~~i~~~~~~~~ 122 (125)
++.+..+... .....+.|+ |||+++++++. ++++.++|..+.
T Consensus 230 ~~~v~~i~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~ 276 (567)
T 1qks_A 230 PTTVAEIKIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETL 276 (567)
T ss_dssp CCEEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTC
T ss_pred CcEeEEEecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCC
Confidence 7777777643 345789999 69998888775 699999997664
No 166
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.10 E-value=6.9e-09 Score=66.25 Aligned_cols=99 Identities=8% Similarity=0.082 Sum_probs=68.4
Q ss_pred CCCeEEEEECCC-CcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeC-CCcEEEEEcC-CCce
Q psy14458 6 EDSSCVLYDIRG-SRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHE-DSSCVLYDIR-GSRP 82 (125)
Q Consensus 6 ~d~~i~v~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~i~~~d~~-~~~~ 82 (125)
.++.+.+|++.. ++....+... . ..+...+.+++|+|+++++++++. ++.|++|++. +++.
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~-------~---------~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~ 180 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNY-------E---------YQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEV 180 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEE-------E---------CCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCE
T ss_pred CCceEEEEccCCCCcCcceEeeE-------E---------eCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCE
Confidence 578888888863 4433222210 0 001257889999999998877654 6789999998 6654
Q ss_pred e--EEeC--CCCCceeEEEEccCCCeEEEeec-CCeEEEEeCC
Q psy14458 83 L--QTFK--PHTADVRSIRFSPSAYYLLTGGY-DNKLVLTDLQ 120 (125)
Q Consensus 83 ~--~~~~--~~~~~v~~~~~~~~~~~~~~~~~-d~~i~~~~~~ 120 (125)
. ..+. .+...+.++.|+|||+++++++. ++.+.+|++.
T Consensus 181 ~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~ 223 (365)
T 1jof_A 181 ELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVID 223 (365)
T ss_dssp EEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEe
Confidence 2 2333 24567899999999998887764 7899999764
No 167
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.06 E-value=2.8e-09 Score=67.20 Aligned_cols=103 Identities=16% Similarity=0.175 Sum_probs=75.4
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECC------CCCEEEEEeCCCcEEEE
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDP------SGRLMVSGHEDSSCVLY 75 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~i~~~ 75 (125)
++...+++|++||..+++.+..+.... ....+..++++| +++..++...+..+++|
T Consensus 212 v~d~~~~~I~~~~~~~G~~~~~~~~~~------------------~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~ 273 (329)
T 3fvz_A 212 VADRENGRIQCFKTDTKEFVREIKHAS------------------FGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVM 273 (329)
T ss_dssp EEETTTTEEEEEETTTCCEEEEECCTT------------------TTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEE
T ss_pred EEECCCCEEEEEECCCCcEEEEEeccc------------------cCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEE
Confidence 455667888899988777776664321 114566777777 33333333455689999
Q ss_pred EcCCCceeEEeC---CCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 76 DIRGSRPLQTFK---PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 76 d~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+..+++.+..+. .+...+..++++|+|.++++...++.|++|++...
T Consensus 274 ~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 274 NFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp ETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred EcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 999999888874 56667899999999988899999999999998643
No 168
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.05 E-value=1.8e-08 Score=62.03 Aligned_cols=72 Identities=7% Similarity=0.219 Sum_probs=56.2
Q ss_pred CCeEEEEECCCCCEEEEEeCCC-cEEEEEcCCCceeEEeCCCC--CceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDS-SCVLYDIRGSRPLQTFKPHT--ADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~-~i~~~d~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
..+..+++++++.++++...++ .|.+||. +++.+..+..+. ..+..++++|+|+++++ +.|+.|++|++...
T Consensus 207 ~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 207 NYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp CSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred CCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 4678999999999888887776 9999995 455555554332 34678999999987777 57999999998653
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.04 E-value=2.9e-09 Score=72.55 Aligned_cols=74 Identities=12% Similarity=0.096 Sum_probs=55.5
Q ss_pred CCeEEEEECCCCCEEEEEeCC--------CcEEEEEcC-CC---ceeEEeCCCCCceeEEEEccCCCeEEEeecCC--eE
Q psy14458 49 SPVSALCVDPSGRLMVSGHED--------SSCVLYDIR-GS---RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDN--KL 114 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~--------~~i~~~d~~-~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~--~i 114 (125)
..+..++|+|+++.|+.++.+ ..|++||+. ++ +.......+...+..+.|+|||++++++..++ .|
T Consensus 188 ~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l 267 (662)
T 3azo_A 188 RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNL 267 (662)
T ss_dssp SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEE
T ss_pred CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEE
Confidence 566778999999999877744 379999998 56 33333344567889999999999888887788 56
Q ss_pred EEEeCCCC
Q psy14458 115 VLTDLQGT 122 (125)
Q Consensus 115 ~~~~~~~~ 122 (125)
..||+.++
T Consensus 268 ~~~~~~~~ 275 (662)
T 3azo_A 268 HRVDPATG 275 (662)
T ss_dssp EEECTTTC
T ss_pred EEEECCCC
Confidence 66666443
No 170
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.99 E-value=7.6e-09 Score=66.06 Aligned_cols=70 Identities=19% Similarity=0.166 Sum_probs=57.6
Q ss_pred EEECCCCCEEEEEeC-CCc--EEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 54 LCVDPSGRLMVSGHE-DSS--CVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 54 ~~~~~~~~~~~~~~~-~~~--i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.+|+|+++.++..+. ++. |.+||+.+++.......+...+....|+||++.|+.++.++.+++||+.++.
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~ 113 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLE 113 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 689999998888877 663 8889998888766555555555578899999999999999999999998764
No 171
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.98 E-value=1e-08 Score=70.57 Aligned_cols=98 Identities=5% Similarity=-0.038 Sum_probs=68.7
Q ss_pred eecCCCeEEEEECCCCcce-eeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCc----------
Q psy14458 3 SGHEDSSCVLYDIRGSRPL-QTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSS---------- 71 (125)
Q Consensus 3 t~~~d~~i~v~d~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---------- 71 (125)
.|+.+..|++||+.+++.+ .... .. .....++|+|+++.|+.++.+..
T Consensus 142 ~G~~~~~i~v~dl~tg~~~~~~~~-~~--------------------~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~ 200 (695)
T 2bkl_A 142 NAADEAVLHVIDVDSGEWSKVDVI-EG--------------------GKYATPKWTPDSKGFYYEWLPTDPSIKVDERPG 200 (695)
T ss_dssp TTCSCCEEEEEETTTCCBCSSCCB-SC--------------------CTTCCCEECTTSSEEEEEECCCCTTSCGGGGGG
T ss_pred CCCceEEEEEEECCCCCCcCCccc-Cc--------------------ccccceEEecCCCEEEEEEecCCCCCccccCCC
Confidence 3455678999998887754 1100 00 11257899999999999888766
Q ss_pred ---EEEEEcCCCc----eeEEeCCCCCceeEEEEccCCCeEEEeecCC----eEEEEeCCC
Q psy14458 72 ---CVLYDIRGSR----PLQTFKPHTADVRSIRFSPSAYYLLTGGYDN----KLVLTDLQG 121 (125)
Q Consensus 72 ---i~~~d~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~----~i~~~~~~~ 121 (125)
|++|++.+++ .+.....+...+..+.|+|||++|+..+.++ .|.+++..+
T Consensus 201 ~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~ 261 (695)
T 2bkl_A 201 YTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGE 261 (695)
T ss_dssp GCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTC
T ss_pred CCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCC
Confidence 9999998875 2333334556788999999999998887665 677776543
No 172
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.96 E-value=1.9e-08 Score=63.16 Aligned_cols=74 Identities=14% Similarity=0.153 Sum_probs=60.8
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecC----CeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYD----NKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d----~~i~~~~~~~~ 122 (125)
..+.+++|++++.+++++..++.|++||..+++.......+...+.++.++|+++++++...+ +.|.+||..++
T Consensus 45 ~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~ 122 (333)
T 2dg1_A 45 LQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGD 122 (333)
T ss_dssp CCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSC
T ss_pred ccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCC
Confidence 567899999999988888889999999998877554443456779999999999988887766 68999998765
No 173
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.96 E-value=3.8e-09 Score=67.44 Aligned_cols=70 Identities=14% Similarity=0.219 Sum_probs=51.6
Q ss_pred eEEEEECCCCCE--EEEEe-------------CCCcEEEEEcCC-CceeEEeC----CCCCceeEEEEccCCCeEEEee-
Q psy14458 51 VSALCVDPSGRL--MVSGH-------------EDSSCVLYDIRG-SRPLQTFK----PHTADVRSIRFSPSAYYLLTGG- 109 (125)
Q Consensus 51 i~~~~~~~~~~~--~~~~~-------------~~~~i~~~d~~~-~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~- 109 (125)
...++++|++++ +++++ .++.+.+|++.. ++....+. .+...+.++.|+|||++++++.
T Consensus 85 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~ 164 (365)
T 1jof_A 85 PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADL 164 (365)
T ss_dssp GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET
T ss_pred CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcC
Confidence 445789999984 45553 688999999973 55433332 2456788999999999887765
Q ss_pred cCCeEEEEeCC
Q psy14458 110 YDNKLVLTDLQ 120 (125)
Q Consensus 110 ~d~~i~~~~~~ 120 (125)
.++.|.+|++.
T Consensus 165 ~~~~v~~~~~~ 175 (365)
T 1jof_A 165 TANKLWTHRKL 175 (365)
T ss_dssp TTTEEEEEEEC
T ss_pred CCCEEEEEEEC
Confidence 47899999987
No 174
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.95 E-value=9.1e-09 Score=66.56 Aligned_cols=81 Identities=16% Similarity=0.127 Sum_probs=65.5
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
++++..||.+.+||+..+.... + . ..++|++|+|+| ++.|..||.+++|+....
T Consensus 139 ~av~~~dG~L~v~dl~~~~~~~-~---~--------------------~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~ 192 (388)
T 1xip_A 139 LVILNSVNDLSALDLRTKSTKQ-L---A--------------------QNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNG 192 (388)
T ss_dssp EEEEETTSEEEEEETTTCCEEE-E---E--------------------ESEEEEEECSSE--EEEEETTSCEEEEEEETT
T ss_pred EEEEECCCCEEEEEccCCcccc-c---c--------------------CCceEEEEcCCc--eEEEEcCCcEEEEcCCCc
Confidence 4678899999999998766532 1 1 578999999999 677889999999988777
Q ss_pred ce--eEEe------C---CCCCceeEEEEccCCCeEEE
Q psy14458 81 RP--LQTF------K---PHTADVRSIRFSPSAYYLLT 107 (125)
Q Consensus 81 ~~--~~~~------~---~~~~~v~~~~~~~~~~~~~~ 107 (125)
+. ...+ . .|...|.++.|.+++.++++
T Consensus 193 ~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 193 EMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred cccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 64 4455 2 36788999999999998887
No 175
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.94 E-value=2.9e-08 Score=63.37 Aligned_cols=95 Identities=11% Similarity=-0.003 Sum_probs=67.3
Q ss_pred eEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCC
Q psy14458 9 SCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKP 88 (125)
Q Consensus 9 ~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~ 88 (125)
.|.+||+.+++......++. ..+...+|+|+++.|+.+..++.|++||+.+++.......
T Consensus 61 ~l~~~d~~~g~~~~lt~~~~--------------------~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~ 120 (388)
T 3pe7_A 61 NYYLLDLNTQVATQLTEGRG--------------------DNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV 120 (388)
T ss_dssp EEEEEETTTCEEEECCCSSC--------------------BCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred eEEEEeCCCCceEEeeeCCC--------------------CCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec
Confidence 36777777666554444333 3334567999999999999999999999999887666665
Q ss_pred CCCceeEEE--EccCCCeEEEe----------------------ecCCeEEEEeCCCCC
Q psy14458 89 HTADVRSIR--FSPSAYYLLTG----------------------GYDNKLVLTDLQGTM 123 (125)
Q Consensus 89 ~~~~v~~~~--~~~~~~~~~~~----------------------~~d~~i~~~~~~~~~ 123 (125)
+...+.... ++|++..++.. ..+..|.+||+.++.
T Consensus 121 ~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~ 179 (388)
T 3pe7_A 121 PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE 179 (388)
T ss_dssp CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC
T ss_pred hhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc
Confidence 555554443 48899888742 234679999988763
No 176
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.92 E-value=1.2e-07 Score=58.39 Aligned_cols=72 Identities=11% Similarity=0.201 Sum_probs=58.2
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCC--CCceeEEEEccCCCeEEEeecCC-eEEEEeCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPH--TADVRSIRFSPSAYYLLTGGYDN-KLVLTDLQG 121 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~d~-~i~~~~~~~ 121 (125)
..+..++++++++++++...++.|++||. .++.+..+..+ ...+..++++|+|+++++...++ .|.+|+...
T Consensus 164 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g 238 (286)
T 1q7f_A 164 EFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG 238 (286)
T ss_dssp SSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS
T ss_pred CCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC
Confidence 46789999999998888888999999997 45555566533 35688999999999888888886 999999654
No 177
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.91 E-value=1.8e-08 Score=69.51 Aligned_cols=92 Identities=14% Similarity=0.128 Sum_probs=66.6
Q ss_pred eEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCc----------------E
Q psy14458 9 SCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSS----------------C 72 (125)
Q Consensus 9 ~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~----------------i 72 (125)
.|++||+.+++........ ..+..++|+|+++.|+.+..++. |
T Consensus 152 ~i~v~d~~tg~~~~~~~~~---------------------~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v 210 (710)
T 2xdw_A 152 TIKFMKVDGAKELPDVLER---------------------VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKL 210 (710)
T ss_dssp EEEEEETTTTEEEEEEEEE---------------------ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEE
T ss_pred EEEEEECCCCCCCcccccC---------------------cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEE
Confidence 7888888777654422111 22567899999999988887765 9
Q ss_pred EEEEcCCCce--eEEeC--CCCCceeEEEEccCCCeEEEeec-----CCeEEEEeCCC
Q psy14458 73 VLYDIRGSRP--LQTFK--PHTADVRSIRFSPSAYYLLTGGY-----DNKLVLTDLQG 121 (125)
Q Consensus 73 ~~~d~~~~~~--~~~~~--~~~~~v~~~~~~~~~~~~~~~~~-----d~~i~~~~~~~ 121 (125)
++|++.+++. ...+. .+...+..+.|+|||++|+..+. +..+.+||+.+
T Consensus 211 ~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 211 YYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp EEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGG
T ss_pred EEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcc
Confidence 9999988652 22233 34556788999999999887764 56899999875
No 178
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.89 E-value=8.5e-08 Score=58.38 Aligned_cols=75 Identities=9% Similarity=0.049 Sum_probs=58.8
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
..+..+++++++.++++...++.|.+|+............+...+..++++|+|+++++...++.|.++++....
T Consensus 192 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 192 TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp CSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred CCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 567899999999888887788899999986654333222233568899999999988999999999999987543
No 179
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.89 E-value=1.9e-07 Score=58.62 Aligned_cols=73 Identities=12% Similarity=0.093 Sum_probs=53.6
Q ss_pred CCeEEEEECCCCCEEEEEeCC----CcEEEEEcCCCceeEEeC--CCCCceeEEEEccCCCeEEEeec------CCeEEE
Q psy14458 49 SPVSALCVDPSGRLMVSGHED----SSCVLYDIRGSRPLQTFK--PHTADVRSIRFSPSAYYLLTGGY------DNKLVL 116 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~----~~i~~~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~------d~~i~~ 116 (125)
..+.+++++|++.++++...+ +.|.+||..+++....+. .....+..+.++|+++++++... .+.|..
T Consensus 87 ~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~ 166 (333)
T 2dg1_A 87 ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYY 166 (333)
T ss_dssp SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEE
T ss_pred CCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEE
Confidence 578999999999988887666 689999988766543332 23456889999999988887654 355666
Q ss_pred EeCCC
Q psy14458 117 TDLQG 121 (125)
Q Consensus 117 ~~~~~ 121 (125)
+|..+
T Consensus 167 ~~~~~ 171 (333)
T 2dg1_A 167 VSPDF 171 (333)
T ss_dssp ECTTS
T ss_pred EeCCC
Confidence 66554
No 180
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.87 E-value=1.8e-07 Score=58.95 Aligned_cols=73 Identities=12% Similarity=0.215 Sum_probs=57.7
Q ss_pred CCeEEEEECC-CCCEEEEEe-CCCcEEEEEcCCCceeEEeCC----------CCCceeEEEEccC-CCeEEEeecCCeEE
Q psy14458 49 SPVSALCVDP-SGRLMVSGH-EDSSCVLYDIRGSRPLQTFKP----------HTADVRSIRFSPS-AYYLLTGGYDNKLV 115 (125)
Q Consensus 49 ~~i~~~~~~~-~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~----------~~~~v~~~~~~~~-~~~~~~~~~d~~i~ 115 (125)
.....++++| ++.++++.+ .++.|++|+ .+++.+..+.. +-.....++++|+ +.++++...++.|+
T Consensus 143 ~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~ 221 (329)
T 3fvz_A 143 CQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQ 221 (329)
T ss_dssp SSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEE
Confidence 4678999999 788888876 689999999 56666666642 2234788999998 88888888999999
Q ss_pred EEeCCCC
Q psy14458 116 LTDLQGT 122 (125)
Q Consensus 116 ~~~~~~~ 122 (125)
+|+..++
T Consensus 222 ~~~~~~G 228 (329)
T 3fvz_A 222 CFKTDTK 228 (329)
T ss_dssp EEETTTC
T ss_pred EEECCCC
Confidence 9998743
No 181
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.86 E-value=2.6e-08 Score=69.04 Aligned_cols=82 Identities=10% Similarity=0.163 Sum_probs=56.6
Q ss_pred CeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEE-e
Q psy14458 8 SSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQT-F 86 (125)
Q Consensus 8 ~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~-~ 86 (125)
+.+.+||+.+++... +..+. ..+...+|||+|+.++.+. ++.|++|++.+++.... .
T Consensus 92 ~~~~~~d~~~~~~~~-l~~~~--------------------~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~ 149 (740)
T 4a5s_A 92 ASYDIYDLNKRQLIT-EERIP--------------------NNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITW 149 (740)
T ss_dssp EEEEEEETTTTEECC-SSCCC--------------------TTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCS
T ss_pred eEEEEEECCCCcEEE-cccCC--------------------CcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcC
Confidence 445678877766432 33333 5788999999999998884 68899999987764432 2
Q ss_pred CCCCCce-----------------eEEEEccCCCeEEEeecC
Q psy14458 87 KPHTADV-----------------RSIRFSPSAYYLLTGGYD 111 (125)
Q Consensus 87 ~~~~~~v-----------------~~~~~~~~~~~~~~~~~d 111 (125)
.++...+ ..+.|+|||+.|+..+.|
T Consensus 150 ~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d 191 (740)
T 4a5s_A 150 TGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFN 191 (740)
T ss_dssp CCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEE
T ss_pred CCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEc
Confidence 2222222 358999999999987643
No 182
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.81 E-value=6.9e-08 Score=60.81 Aligned_cols=59 Identities=14% Similarity=0.263 Sum_probs=44.3
Q ss_pred CeEEEEECCCCCEEEEEeCC---C--cEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeec
Q psy14458 50 PVSALCVDPSGRLMVSGHED---S--SCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGY 110 (125)
Q Consensus 50 ~i~~~~~~~~~~~~~~~~~~---~--~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 110 (125)
.+..++|+|+++.++..+.+ + .|++|++.+++...... +.. +..+.|+||++.|+.++.
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~-~~~-~~~~~wspdg~~l~~~~~ 123 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILE-AKN-IRSLEWNEDSRKLLIVGF 123 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEE-ESE-EEEEEECTTSSEEEEEEE
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEc-CCC-ccceeECCCCCEEEEEEc
Confidence 46788999999988877653 2 38888888776554443 233 889999999998888764
No 183
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.81 E-value=7.9e-08 Score=65.54 Aligned_cols=72 Identities=15% Similarity=0.124 Sum_probs=52.1
Q ss_pred CCeEEEEECCCCCEEEEEeCCC--cEEEEEcCCCceeEEeCCCCCc--------eeEEEEccCCCeEEEeecCCeEEEE-
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDS--SCVLYDIRGSRPLQTFKPHTAD--------VRSIRFSPSAYYLLTGGYDNKLVLT- 117 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~--~i~~~d~~~~~~~~~~~~~~~~--------v~~~~~~~~~~~~~~~~~d~~i~~~- 117 (125)
..+..++|+|+++++++++.++ .|++||..+++.......+... +..+.|+|+++++++++. +.+.+|
T Consensus 242 ~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ 320 (662)
T 3azo_A 242 EAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGI 320 (662)
T ss_dssp BCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEE
T ss_pred ceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEE
Confidence 5778999999999888888888 5666666555543322222221 567899999999999988 888888
Q ss_pred -eCCC
Q psy14458 118 -DLQG 121 (125)
Q Consensus 118 -~~~~ 121 (125)
|+.+
T Consensus 321 ~d~~~ 325 (662)
T 3azo_A 321 LDPES 325 (662)
T ss_dssp EETTT
T ss_pred EECCC
Confidence 5543
No 184
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.77 E-value=1.3e-07 Score=61.22 Aligned_cols=95 Identities=14% Similarity=0.147 Sum_probs=73.5
Q ss_pred CCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEe----------CCCcEEEEE
Q psy14458 7 DSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGH----------EDSSCVLYD 76 (125)
Q Consensus 7 d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------~~~~i~~~d 76 (125)
++.|.+.|..+++.+..+..-. .+ . ++++|+++.++.++ .++.|.+||
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG~--------------------~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGGF--------------------LP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEECS--------------------SC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCEEEEEECCCCeEEEEEECCC--------------------CC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 5789999999888887776433 23 4 99999998887765 367899999
Q ss_pred cCCCceeEEeCCC-------CCceeEEEEccCCCeEEEeec--CCeEEEEeCCCCC
Q psy14458 77 IRGSRPLQTFKPH-------TADVRSIRFSPSAYYLLTGGY--DNKLVLTDLQGTM 123 (125)
Q Consensus 77 ~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~~~~--d~~i~~~~~~~~~ 123 (125)
..+.+.+..+... ......+.++|||++++.+.. ++.|.++|+.++.
T Consensus 116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~ 171 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKA 171 (386)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTE
T ss_pred CCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCc
Confidence 9999888776421 124567999999998888764 6899999998763
No 185
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.77 E-value=1.6e-07 Score=60.07 Aligned_cols=73 Identities=15% Similarity=0.270 Sum_probs=61.3
Q ss_pred CeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC--ceeEE
Q psy14458 8 SSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS--RPLQT 85 (125)
Q Consensus 8 ~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~--~~~~~ 85 (125)
+.|.+||+.+++.+..+..+ . ...++|+|+++++++++. +.|.+||..++ +.+..
T Consensus 286 ~~v~viD~~t~~~v~~i~~~---------------------~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~ 342 (361)
T 2oiz_A 286 AEIWVMDTKTKQRVARIPGR---------------------D-ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRT 342 (361)
T ss_dssp SEEEEEETTTTEEEEEEECT---------------------T-CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEE
T ss_pred ceEEEEECCCCcEEEEEecC---------------------C-eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEE
Confidence 47888898888877776533 3 678999999999998887 99999999999 88888
Q ss_pred eCCCCCceeEEEEccCCC
Q psy14458 86 FKPHTADVRSIRFSPSAY 103 (125)
Q Consensus 86 ~~~~~~~v~~~~~~~~~~ 103 (125)
+.......+.+.++|+|.
T Consensus 343 i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 343 IEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp ETTSCSSEEEEEECCCSC
T ss_pred eccCCCCcEEEEecCCCC
Confidence 766777788899999985
No 186
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.73 E-value=9.6e-07 Score=54.78 Aligned_cols=74 Identities=15% Similarity=0.227 Sum_probs=59.1
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeE-EEeecCCeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYL-LTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~d~~i~~~~~~~~ 122 (125)
.....+++++++.++++...++.|.+||..+++....+..+...+.+++++|+++.+ ++...++.|..+++...
T Consensus 226 ~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 226 GGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp CEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 346789999999988888788999999988777666666566778999999999844 55556788999998753
No 187
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.72 E-value=4.9e-07 Score=57.04 Aligned_cols=95 Identities=8% Similarity=0.003 Sum_probs=71.1
Q ss_pred CCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCC----------CcEEEE
Q psy14458 6 EDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHED----------SSCVLY 75 (125)
Q Consensus 6 ~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~----------~~i~~~ 75 (125)
.++.|.++|+.+++.+..+... .....++++|+++++++...+ +.|.++
T Consensus 150 ~~~~v~viD~~t~~~~~~i~~g---------------------~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~i 208 (328)
T 3dsm_A 150 YQNRILKIDTETDKVVDELTIG---------------------IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRI 208 (328)
T ss_dssp TCCEEEEEETTTTEEEEEEECS---------------------SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEEcC---------------------CCccceEEcCCCCEEEEECCCccCCccccCCceEEEE
Confidence 4778889998888776655432 334678889999877776654 789999
Q ss_pred EcCCCceeEEeCCC-CCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 76 DIRGSRPLQTFKPH-TADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 76 d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
|..+++....+... ......++++|+++.+..+.. .+.++|..++.
T Consensus 209 d~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~ 255 (328)
T 3dsm_A 209 DAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADR 255 (328)
T ss_dssp ETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSS
T ss_pred ECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCc
Confidence 99988877666522 346789999999888877655 89999987653
No 188
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.72 E-value=2.2e-07 Score=59.30 Aligned_cols=75 Identities=13% Similarity=0.053 Sum_probs=51.6
Q ss_pred CCCeEEEEECC-CCCEEEEEeCC------CcEEEEEcCCCceeEEeCCC--CCceeEEEEccCCCeEEEeecC-----Ce
Q psy14458 48 GSPVSALCVDP-SGRLMVSGHED------SSCVLYDIRGSRPLQTFKPH--TADVRSIRFSPSAYYLLTGGYD-----NK 113 (125)
Q Consensus 48 ~~~i~~~~~~~-~~~~~~~~~~~------~~i~~~d~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~d-----~~ 113 (125)
...+..+.|+| ++..++..+.+ ..|.+||+..++.. .+..+ ...+..+.|+|+|+.|+..+.+ +.
T Consensus 187 ~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~ 265 (396)
T 3c5m_A 187 TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRV 265 (396)
T ss_dssp SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEE
T ss_pred CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEECCCCCEEEEEecCCCCccce
Confidence 35678889999 77766665443 35888887655433 23323 2357789999999988777554 45
Q ss_pred EEEEeCCCCC
Q psy14458 114 LVLTDLQGTM 123 (125)
Q Consensus 114 i~~~~~~~~~ 123 (125)
|++||+.++.
T Consensus 266 l~~~d~~~g~ 275 (396)
T 3c5m_A 266 IYKANPETLE 275 (396)
T ss_dssp EEEECTTTCC
T ss_pred EEEEECCCCC
Confidence 9999997653
No 189
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.72 E-value=8.7e-07 Score=57.09 Aligned_cols=92 Identities=13% Similarity=0.006 Sum_probs=68.1
Q ss_pred eEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEe----------CCCcEEEEEcC
Q psy14458 9 SCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGH----------EDSSCVLYDIR 78 (125)
Q Consensus 9 ~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------~~~~i~~~d~~ 78 (125)
.|.++|..+++.+..+... ..- .++++|++++++.+. .++.|.++|..
T Consensus 48 ~v~v~D~~t~~~~~~i~~g---------------------~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~ 105 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGG---------------------FLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV 105 (373)
T ss_pred EEEEEECCCCeEEEEecCC---------------------CCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC
Confidence 7788888877766555422 222 889999999988876 36789999999
Q ss_pred CCceeEEeCCC-------CCceeEEEEccCCCeEEEeec--CCeEEEEeCCCCC
Q psy14458 79 GSRPLQTFKPH-------TADVRSIRFSPSAYYLLTGGY--DNKLVLTDLQGTM 123 (125)
Q Consensus 79 ~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~~~~--d~~i~~~~~~~~~ 123 (125)
+.+.+..+... ......+.++|||++++.++. +..|.++| .++.
T Consensus 106 t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~ 158 (373)
T 2mad_H 106 TFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGS 158 (373)
T ss_pred CCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCC
Confidence 88777665421 123457999999999998874 57899999 7653
No 190
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.69 E-value=7.3e-07 Score=54.23 Aligned_cols=74 Identities=15% Similarity=0.140 Sum_probs=57.4
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
..+.+++++++++++++...++.|.+||................+..++++++|.++++...++.|..|+..+.
T Consensus 150 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 150 NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST 223 (270)
T ss_dssp CSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCS
T ss_pred CCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCC
Confidence 35778999999998787777889999998766544322233356789999999988888778889999998654
No 191
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.67 E-value=1.8e-07 Score=59.67 Aligned_cols=72 Identities=13% Similarity=0.127 Sum_probs=53.8
Q ss_pred eEEEEECCCCCEEEEEeCC---CcEEEEEcCCCceeEEeCCCCCce-eEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 51 VSALCVDPSGRLMVSGHED---SSCVLYDIRGSRPLQTFKPHTADV-RSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 51 i~~~~~~~~~~~~~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+..++|+|+++.++..... ..|.+||+.+++... +..+...+ ....|+|||+.|+..+.++.+++||+.++.
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~ 113 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQ-LTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLE 113 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEE-CCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEE-eecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCC
Confidence 5677899999988776543 368888988776544 33333333 347899999999999999999999987653
No 192
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.66 E-value=3.1e-07 Score=60.19 Aligned_cols=93 Identities=14% Similarity=0.129 Sum_probs=73.1
Q ss_pred CeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEe----------CCCcEEEEEc
Q psy14458 8 SSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGH----------EDSSCVLYDI 77 (125)
Q Consensus 8 ~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------~~~~i~~~d~ 77 (125)
+.|.++|+.+++.+..+..-. .+ .++++|+++.++.++ .++.|.++|.
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~--------------------~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~ 156 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGF--------------------LP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDP 156 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECS--------------------SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred CeEEEEECCCCEEEEEEECCC--------------------CC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEEC
Confidence 689999999888887776433 34 899999998887776 4678999999
Q ss_pred CCCceeEEeCCC-------CCceeEEEEccCCCeEEEeec--CCeEEEEeCCCC
Q psy14458 78 RGSRPLQTFKPH-------TADVRSIRFSPSAYYLLTGGY--DNKLVLTDLQGT 122 (125)
Q Consensus 78 ~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~~~~--d~~i~~~~~~~~ 122 (125)
.+.+.+..+..- ......+.++|||++++.+.. ++.|.+.|+.+.
T Consensus 157 ~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~ 210 (426)
T 3c75_H 157 VTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGK 210 (426)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTT
T ss_pred CCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCC
Confidence 999887776421 123467899999999988764 678999999875
No 193
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.65 E-value=7.9e-07 Score=55.01 Aligned_cols=72 Identities=8% Similarity=-0.003 Sum_probs=60.7
Q ss_pred CCeEEEEECCCCC-EEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGR-LMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~-~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
....+++|+|+++ +++++..++.|+.|+..++ ...+..+...+.++.++|+|+++++...++.|.+||..++
T Consensus 28 ~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g 100 (296)
T 3e5z_A 28 TWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGG 100 (296)
T ss_dssp SSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTC
T ss_pred ccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCC
Confidence 5678999999998 7888888999999998877 5556656777899999999998888877889999998654
No 194
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.65 E-value=1.2e-06 Score=55.31 Aligned_cols=99 Identities=8% Similarity=0.042 Sum_probs=71.4
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCc
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSR 81 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 81 (125)
++...++.|.+||..+++.+..+.. . .....+++++++..+++...++.|.++|..+++
T Consensus 58 v~~~~~~~v~viD~~t~~~~~~i~~-~--------------------~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~ 116 (328)
T 3dsm_A 58 IVVNNSHVIFAIDINTFKEVGRITG-F--------------------TSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYE 116 (328)
T ss_dssp EEEGGGTEEEEEETTTCCEEEEEEC-C--------------------SSEEEEEEEETTEEEEEEBSCSEEEEEETTTTE
T ss_pred EEEcCCCEEEEEECcccEEEEEcCC-C--------------------CCCcEEEEeCCCeEEEEECCCCeEEEEECCCCe
Confidence 3445678999999999888777742 2 467788998888544444478999999999988
Q ss_pred eeEEeCCCC-----CceeEEEEccCCCeEEEee-cCCeEEEEeCCCC
Q psy14458 82 PLQTFKPHT-----ADVRSIRFSPSAYYLLTGG-YDNKLVLTDLQGT 122 (125)
Q Consensus 82 ~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~-~d~~i~~~~~~~~ 122 (125)
....+.... .....+.+ .+++++++.. .++.|.++|+.++
T Consensus 117 ~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~ 162 (328)
T 3dsm_A 117 ITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETD 162 (328)
T ss_dssp EEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTT
T ss_pred EEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCC
Confidence 776665322 14556777 4555556654 4899999998865
No 195
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.64 E-value=1.2e-06 Score=54.15 Aligned_cols=84 Identities=11% Similarity=0.115 Sum_probs=60.0
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCc
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSR 81 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 81 (125)
+++..++.|..||..++ ...+..+. ..+.++++++++.++++...++.|.+||..+++
T Consensus 44 ~~~~~~~~i~~~~~~~~--~~~~~~~~--------------------~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 44 FSDVRQNRTWAWSDDGQ--LSPEMHPS--------------------HHQNGHCLNKQGHLIACSHGLRRLERQREPGGE 101 (296)
T ss_dssp EEEGGGTEEEEEETTSC--EEEEESSC--------------------SSEEEEEECTTCCEEEEETTTTEEEEECSTTCC
T ss_pred EEeCCCCEEEEEECCCC--eEEEECCC--------------------CCcceeeECCCCcEEEEecCCCeEEEEcCCCCc
Confidence 45566777888887655 34443333 568899999999988887777899999987776
Q ss_pred eeEEeCCC----CCceeEEEEccCCCeEEE
Q psy14458 82 PLQTFKPH----TADVRSIRFSPSAYYLLT 107 (125)
Q Consensus 82 ~~~~~~~~----~~~v~~~~~~~~~~~~~~ 107 (125)
........ ...+..+.++|+|+++++
T Consensus 102 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~vt 131 (296)
T 3e5z_A 102 WESIADSFEGKKLNSPNDVCLAPDGSLWFS 131 (296)
T ss_dssp EEEEECEETTEECCCCCCEEECTTSCEEEE
T ss_pred EEEEeeccCCCCCCCCCCEEECCCCCEEEE
Confidence 44332211 234678999999998887
No 196
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.62 E-value=2.3e-07 Score=59.71 Aligned_cols=90 Identities=12% Similarity=-0.039 Sum_probs=70.1
Q ss_pred eEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEe----------CCCcEEEEEcC
Q psy14458 9 SCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGH----------EDSSCVLYDIR 78 (125)
Q Consensus 9 ~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------~~~~i~~~d~~ 78 (125)
.|.+.|..+++.+..+.... .+ .+.++|++++++.++ .++.|.+||..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~--------------------~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~ 104 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAF--------------------LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPV 104 (368)
T ss_dssp EEEEEETTTTEEEEEEEECT--------------------TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTT
T ss_pred eEEEEECCCCeEEEEEeCCC--------------------CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECC
Confidence 78888988888887776433 34 799999998888876 36889999999
Q ss_pred CCceeEEeCCC-------CCceeEEEEccCCCeEEEeec--CCeEEE--EeCC
Q psy14458 79 GSRPLQTFKPH-------TADVRSIRFSPSAYYLLTGGY--DNKLVL--TDLQ 120 (125)
Q Consensus 79 ~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~~~~--d~~i~~--~~~~ 120 (125)
+++.+..+... ......+.++|||++++.+.. +..+.+ +|..
T Consensus 105 T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~ 157 (368)
T 1mda_H 105 TFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGAS 157 (368)
T ss_dssp TCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTE
T ss_pred CCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchh
Confidence 99988887532 123567999999999988874 466888 8774
No 197
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.61 E-value=5.5e-09 Score=67.08 Aligned_cols=101 Identities=15% Similarity=0.045 Sum_probs=56.7
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
+++++.|+.|+.||+.+++.+..+.. . ++ .+..+..++..++.++.|+.|+.||..++
T Consensus 12 v~~gs~dg~v~a~d~~tG~~~W~~~~-~-~~--------------------~s~p~~~~g~~~v~~s~dg~l~a~d~~tG 69 (369)
T 2hz6_A 12 LFVSTLDGSLHAVSKRTGSIKWTLKE-D-PV--------------------LQVPTHVEEPAFLPDPNDGSLYTLGSKNN 69 (369)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEEC-C-CS--------------------CCCC-----CCEEECTTTCCEEEC-----
T ss_pred EEEEcCCCEEEEEECCCCCEEEEecC-C-Cc--------------------eecceEcCCCEEEEeCCCCEEEEEECCCC
Confidence 46788999999999999999887764 2 11 11223345667777889999999999888
Q ss_pred ceeEEeCCCCC-ceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 81 RPLQTFKPHTA-DVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 81 ~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+.+..+..+.. .+.+.....++..+++++.|+.++.||.+++.
T Consensus 70 ~~~w~~~~~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~ 113 (369)
T 2hz6_A 70 EGLTKLPFTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGE 113 (369)
T ss_dssp CCSEECSCCHHHHHTTCSCC-----CCCCEEEEEEEEECCC---
T ss_pred ceeeeeeccCccccccCceEecCCEEEEEeCCCEEEEEECCCCc
Confidence 87766653321 11110000133456677778888888887654
No 198
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.57 E-value=1.1e-06 Score=54.31 Aligned_cols=71 Identities=15% Similarity=0.115 Sum_probs=59.5
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 51 VSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 51 i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
...++..++++++++...++.|.+||.. ++.+..+... .....+...+++.++++++.++.|..+|..++.
T Consensus 127 ~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~ 197 (276)
T 3no2_A 127 FRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNR 197 (276)
T ss_dssp CSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCC
T ss_pred ccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCc
Confidence 4455778999999999999999999987 9988888743 456678888999999999988899999988653
No 199
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.55 E-value=6.9e-07 Score=61.59 Aligned_cols=73 Identities=7% Similarity=0.064 Sum_probs=55.8
Q ss_pred CCeEEEEECCCCCEEE-----EEeCCCcEEEEEcCCCceeEEeCCCCCce--eEEEEccCCCeEEEeecCCe--------
Q psy14458 49 SPVSALCVDPSGRLMV-----SGHEDSSCVLYDIRGSRPLQTFKPHTADV--RSIRFSPSAYYLLTGGYDNK-------- 113 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~-----~~~~~~~i~~~d~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~~~~~d~~-------- 113 (125)
..+..++|||++++++ .|+.+..|++||+.+++.+. ..+-..+ ..+.|+|||+.|+.++.|..
T Consensus 121 ~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~ 198 (695)
T 2bkl_A 121 VSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDER 198 (695)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGG
T ss_pred EEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccC
Confidence 4688999999999888 44455789999999987641 1121222 67999999999999988776
Q ss_pred -----EEEEeCCCCC
Q psy14458 114 -----LVLTDLQGTM 123 (125)
Q Consensus 114 -----i~~~~~~~~~ 123 (125)
|++|++.++.
T Consensus 199 ~~~~~v~~~~l~t~~ 213 (695)
T 2bkl_A 199 PGYTTIRYHTLGTEP 213 (695)
T ss_dssp GGGCEEEEEETTSCG
T ss_pred CCCCEEEEEECCCCc
Confidence 9999998654
No 200
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.54 E-value=4.8e-07 Score=62.47 Aligned_cols=74 Identities=11% Similarity=0.213 Sum_probs=57.1
Q ss_pred CCeEEEEECCCCCEEEEEeCCC-----cEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCe----------
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDS-----SCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNK---------- 113 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~-----~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~---------- 113 (125)
..+..++|||++++++.+..++ .|++||+.+++...... ....+..+.|+|||+.|+.++.++.
T Consensus 125 ~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~-~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~ 203 (710)
T 2xdw_A 125 VALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL-ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETS 203 (710)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE-EEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCC
T ss_pred EEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc-cCcccceEEEEeCCCEEEEEEECCccccccccccc
Confidence 3578999999999988765443 89999999987665322 1223667999999999999887765
Q ss_pred ------EEEEeCCCCC
Q psy14458 114 ------LVLTDLQGTM 123 (125)
Q Consensus 114 ------i~~~~~~~~~ 123 (125)
|++|++.++.
T Consensus 204 ~~~~~~v~~~~l~t~~ 219 (710)
T 2xdw_A 204 TNLHQKLYYHVLGTDQ 219 (710)
T ss_dssp CCCCCEEEEEETTSCG
T ss_pred cCCCCEEEEEECCCCc
Confidence 9999997653
No 201
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.53 E-value=7.1e-07 Score=61.97 Aligned_cols=70 Identities=7% Similarity=0.057 Sum_probs=51.0
Q ss_pred EEEEECCCCCEEEEEeCCCc--------------EEEEEcCCCce--eEEeC--CCCCceeEEEEccCCCeEEEeecCC-
Q psy14458 52 SALCVDPSGRLMVSGHEDSS--------------CVLYDIRGSRP--LQTFK--PHTADVRSIRFSPSAYYLLTGGYDN- 112 (125)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~--------------i~~~d~~~~~~--~~~~~--~~~~~v~~~~~~~~~~~~~~~~~d~- 112 (125)
..++|+|+ +.|+.+..++. |++|++.+++. ...+. .+...+..+.|+|||++|+..+.++
T Consensus 212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~ 290 (741)
T 1yr2_A 212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGT 290 (741)
T ss_dssp CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTT
T ss_pred ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccC
Confidence 46789999 88887776554 88999877652 22333 2334578899999999888877543
Q ss_pred ----eEEEEeCCCC
Q psy14458 113 ----KLVLTDLQGT 122 (125)
Q Consensus 113 ----~i~~~~~~~~ 122 (125)
.|.+||+.++
T Consensus 291 ~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 291 DPVNTVHVARVTNG 304 (741)
T ss_dssp CSCCEEEEEEEETT
T ss_pred CCcceEEEEECCCC
Confidence 7999998764
No 202
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.53 E-value=7.7e-06 Score=55.51 Aligned_cols=100 Identities=16% Similarity=0.156 Sum_probs=66.3
Q ss_pred eeecCCCeEEEEECC--CCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEEC----CCCCEEEEEeC-CCcEEE
Q psy14458 2 VSGHEDSSCVLYDIR--GSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVD----PSGRLMVSGHE-DSSCVL 74 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~-~~~i~~ 74 (125)
++++.|+.|.+||+. +++.+..+... .....++++ |++++++.++. .+.+.+
T Consensus 212 yv~~~dg~V~viD~~~~t~~~v~~i~~G---------------------~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~V 270 (567)
T 1qks_A 212 FVIGRDGKVNMIDLWMKEPTTVAEIKIG---------------------SEARSIETSKMEGWEDKYAIAGAYWPPQYVI 270 (567)
T ss_dssp EEEETTSEEEEEETTSSSCCEEEEEECC---------------------SEEEEEEECCSTTCTTTEEEEEEEETTEEEE
T ss_pred EEEcCCCeEEEEECCCCCCcEeEEEecC---------------------CCCceeEEccccCCCCCEEEEEEccCCeEEE
Confidence 456788899999985 66666555532 345677888 58877766654 477888
Q ss_pred EEcCCCceeEEeCCC-------------------------------------------------------CCceeEEEEc
Q psy14458 75 YDIRGSRPLQTFKPH-------------------------------------------------------TADVRSIRFS 99 (125)
Q Consensus 75 ~d~~~~~~~~~~~~~-------------------------------------------------------~~~v~~~~~~ 99 (125)
+|..+.+.+..+... ......+.|+
T Consensus 271 iD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~ 350 (567)
T 1qks_A 271 MDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLD 350 (567)
T ss_dssp EETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEEC
T ss_pred EECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceEC
Confidence 887776555443210 1122356788
Q ss_pred cCCCeEEEee-cCCeEEEEeCCCC
Q psy14458 100 PSAYYLLTGG-YDNKLVLTDLQGT 122 (125)
Q Consensus 100 ~~~~~~~~~~-~d~~i~~~~~~~~ 122 (125)
|++++++++. .++.|.++|+.++
T Consensus 351 pdgr~~~va~~~sn~V~ViD~~t~ 374 (567)
T 1qks_A 351 GSHRYFITAANARNKLVVIDTKEG 374 (567)
T ss_dssp TTSCEEEEEEGGGTEEEEEETTTT
T ss_pred CCCCEEEEEeCCCCeEEEEECCCC
Confidence 8888776655 5788999998765
No 203
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.50 E-value=4.1e-08 Score=63.02 Aligned_cols=97 Identities=14% Similarity=0.120 Sum_probs=55.0
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
+++++.|+.++.||+.+++.+..+..+. ...++|++..++.++.++.|+.||..++
T Consensus 95 v~~g~~dg~v~a~D~~tG~~~w~~~~~~------------------------~~~~~p~~~~v~~~~~dg~v~a~d~~tG 150 (369)
T 2hz6_A 95 LYMGKKQDIWYVIDLLTGEKQQTLSSAF------------------------ADSLSPSTSLLYLGRTEYTITMYDTKTR 150 (369)
T ss_dssp CCCCEEEEEEEEECCC----------------------------------------------EEEEEEEEEEECCCSSSS
T ss_pred EEEEeCCCEEEEEECCCCcEEEEecCCC------------------------cccccccCCEEEEEecCCEEEEEECCCC
Confidence 3567788999999999998877665332 1223457788888999999999999998
Q ss_pred ceeEEeCCCCCceeEEEEccCC---CeEEEeecCCeEEEEeCCCCC
Q psy14458 81 RPLQTFKPHTADVRSIRFSPSA---YYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+.+..+.... .....+.++. ..++.++.|+.+..||.+++.
T Consensus 151 ~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~ 194 (369)
T 2hz6_A 151 ELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGD 194 (369)
T ss_dssp SCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCC
T ss_pred CEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCc
Confidence 8766554211 1222233322 467778899999999998764
No 204
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.48 E-value=1.8e-05 Score=50.98 Aligned_cols=72 Identities=10% Similarity=-0.106 Sum_probs=57.1
Q ss_pred eEEEEECCCCCEEEEEeC----------CCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCC-eEEEee-cCCeEEEEe
Q psy14458 51 VSALCVDPSGRLMVSGHE----------DSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAY-YLLTGG-YDNKLVLTD 118 (125)
Q Consensus 51 i~~~~~~~~~~~~~~~~~----------~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~-~d~~i~~~~ 118 (125)
...++++|+++.++.+.. .+.|.++|..+++.+..+. ......++.|+|||+ .++++. .++.|.++|
T Consensus 269 ~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~-~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD 347 (373)
T 2mad_H 269 WQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYD 347 (373)
T ss_pred eEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE-CCCCcCeEEECCCCCeEEEEEcCCCCeEEEEE
Confidence 445788999887766543 3579999999999888886 344578999999998 777777 589999999
Q ss_pred CCCCC
Q psy14458 119 LQGTM 123 (125)
Q Consensus 119 ~~~~~ 123 (125)
+.++.
T Consensus 348 ~~t~~ 352 (373)
T 2mad_H 348 AGAGD 352 (373)
T ss_pred CCCCC
Confidence 98764
No 205
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.42 E-value=6.3e-06 Score=56.96 Aligned_cols=121 Identities=8% Similarity=0.068 Sum_probs=77.2
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCC-eEEEEecCccc------------cccc-CC-CCCeEEEEECCCCCEEEEE
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTAD-VRSIHLDHYTT------------EAGT-RQ-GSPVSALCVDPSGRLMVSG 66 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~------------~~~~-~~-~~~i~~~~~~~~~~~~~~~ 66 (125)
+.++.++.++++|..+++.+..+.....+ ...+.-.+... .... .. ...-..++++|+..+++..
T Consensus 331 ~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~ 410 (677)
T 1kb0_A 331 LHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLP 410 (677)
T ss_dssp EECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEE
T ss_pred EEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEe
Confidence 56788999999999999988766532211 11110000000 0000 00 0111356788887777665
Q ss_pred eC-------------------------------------------CCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCC
Q psy14458 67 HE-------------------------------------------DSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAY 103 (125)
Q Consensus 67 ~~-------------------------------------------~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 103 (125)
.. .+.|..||+.+++.+..+. +...+....+...+.
T Consensus 411 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~ 489 (677)
T 1kb0_A 411 AQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGN 489 (677)
T ss_dssp EEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTT
T ss_pred ChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCC
Confidence 33 2779999999999888776 344455555666777
Q ss_pred eEEEeecCCeEEEEeCCCCC
Q psy14458 104 YLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 104 ~~~~~~~d~~i~~~~~~~~~ 123 (125)
.++.++.|+.+++||.+++.
T Consensus 490 ~v~~g~~dg~l~a~D~~tG~ 509 (677)
T 1kb0_A 490 VVFQGTADGRLVAYHAATGE 509 (677)
T ss_dssp EEEEECTTSEEEEEETTTCC
T ss_pred EEEEECCCCcEEEEECCCCc
Confidence 88889999999999998874
No 206
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.40 E-value=4.1e-05 Score=46.92 Aligned_cols=71 Identities=13% Similarity=0.072 Sum_probs=54.5
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDL 119 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~ 119 (125)
..+..+++++++.++++...++.|..||................+..+.+.|++.++++...++.|..||.
T Consensus 57 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 127 (299)
T 2z2n_A 57 AKVMCLTISSDGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD 127 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred CceeeEEECCCCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC
Confidence 57889999999998888777888999997622222222234456889999999988888777888999987
No 207
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.38 E-value=4.8e-05 Score=46.62 Aligned_cols=70 Identities=9% Similarity=0.030 Sum_probs=54.8
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeE-EeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQ-TFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDL 119 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~ 119 (125)
..+..+++++++.++++...++.|..||. +++... ........+..+.+.+++.++++...++.|..+|.
T Consensus 99 ~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 169 (299)
T 2z2n_A 99 SAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE 169 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred CCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC
Confidence 56889999999988888877889999998 544332 22334456889999999988888777888999987
No 208
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.35 E-value=2.3e-05 Score=51.09 Aligned_cols=68 Identities=4% Similarity=0.059 Sum_probs=50.0
Q ss_pred EEECCCCCEEEEEeCCC--cEEEEEcCCCceeEEe----CCCCCceeEEEEcc-CCCeEEEeecCCeEEEEeCCCC
Q psy14458 54 LCVDPSGRLMVSGHEDS--SCVLYDIRGSRPLQTF----KPHTADVRSIRFSP-SAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 54 ~~~~~~~~~~~~~~~~~--~i~~~d~~~~~~~~~~----~~~~~~v~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
++|++++..++.++.++ .|.+++...+.....+ ......+.+++++| ++.+++ +..++.|..||..++
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~ 250 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQ 250 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTC
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCC
Confidence 89999999888888766 7888987765443333 22446678899999 555555 666889999998754
No 209
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.34 E-value=8.4e-06 Score=56.48 Aligned_cols=54 Identities=9% Similarity=0.061 Sum_probs=42.3
Q ss_pred CCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 69 DSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 69 ~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+|.|..||+.+++.+..+..+. .+....+...+.+++.++.|+.++.||.+++.
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~ 507 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGE 507 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred ceeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCc
Confidence 3779999999999888776433 33334556677788999999999999999875
No 210
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.20 E-value=2e-05 Score=54.55 Aligned_cols=70 Identities=14% Similarity=0.170 Sum_probs=49.0
Q ss_pred EEEEECCCCCEEEEEeCCCc-------------EEEEEcCCCce--eEEeC--C-CCCceeEEEEccCCCeEEEeec---
Q psy14458 52 SALCVDPSGRLMVSGHEDSS-------------CVLYDIRGSRP--LQTFK--P-HTADVRSIRFSPSAYYLLTGGY--- 110 (125)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~-------------i~~~d~~~~~~--~~~~~--~-~~~~v~~~~~~~~~~~~~~~~~--- 110 (125)
..++|+ +++.|+.+..+.. |++|++.+.+. ...+. . +...+..+.|+|||++|+....
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 256 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST 256 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC
Confidence 466899 9988887776643 99999877542 33333 2 3445678999999998855432
Q ss_pred -CCeEEEEeCCCC
Q psy14458 111 -DNKLVLTDLQGT 122 (125)
Q Consensus 111 -d~~i~~~~~~~~ 122 (125)
+..++++|+.++
T Consensus 257 ~~~~i~~~d~~~~ 269 (693)
T 3iuj_A 257 SGNRLYVKDLSQE 269 (693)
T ss_dssp SCCEEEEEETTST
T ss_pred CCcEEEEEECCCC
Confidence 358999998765
No 211
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.20 E-value=3.8e-05 Score=47.67 Aligned_cols=61 Identities=20% Similarity=0.242 Sum_probs=50.0
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEc-cCCCeEEEee
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFS-PSAYYLLTGG 109 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~ 109 (125)
.....+++++++++.++....+.|..||..+++.+..+......+.+++|. |+++.|...+
T Consensus 199 ~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 199 QIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp CEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEE
T ss_pred CCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEc
Confidence 456789999999988888888889999998898888887666789999998 7876554443
No 212
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.20 E-value=0.00019 Score=43.89 Aligned_cols=71 Identities=8% Similarity=-0.011 Sum_probs=54.8
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCcee-EEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPL-QTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
..+..+++++++.++++...++.|..+|.. ++.. .........+..+.+.+++.++++...++.|..+|..
T Consensus 62 ~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 133 (300)
T 2qc5_A 62 AKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD 133 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred CcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC
Confidence 568899999999988877778889999977 5432 2222234668899999999988887778889888876
No 213
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.19 E-value=0.00023 Score=43.55 Aligned_cols=71 Identities=7% Similarity=-0.018 Sum_probs=54.5
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeE-EeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQ-TFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
..+..+++.+++.++++...++.|..+|.. ++... .+......+..+.+.++++++++...++.|..++..
T Consensus 104 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 175 (300)
T 2qc5_A 104 SGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITNT 175 (300)
T ss_dssp CCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT
T ss_pred CCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECCC
Confidence 568899999999988887778889999987 54332 233344568899999999977777778889998873
No 214
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.16 E-value=4.3e-05 Score=47.98 Aligned_cols=65 Identities=14% Similarity=0.066 Sum_probs=47.7
Q ss_pred CCeEE-EEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeE-EEEeC
Q psy14458 49 SPVSA-LCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKL-VLTDL 119 (125)
Q Consensus 49 ~~i~~-~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i-~~~~~ 119 (125)
..+.. +.|+ ++ ++++++.++.+++| +.+++... +..+...|.++.|+| .++++++.++.. .+|.+
T Consensus 263 ~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~-~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~ 329 (347)
T 2gop_A 263 RGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKP-IAKGRHWIMGFDVDE--IVVYLKETATRLRELFTW 329 (347)
T ss_dssp SEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEE-EECSSSEEEEEEESS--SEEEEEECSSSCCEEEEE
T ss_pred cccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEE-EecCCCeEEeeeeeC--cEEEEEcCCCChHHheEe
Confidence 55665 8899 88 88999999999999 87555433 334577889999999 677777666553 66654
No 215
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.09 E-value=0.00031 Score=43.30 Aligned_cols=97 Identities=10% Similarity=-0.004 Sum_probs=67.2
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCc
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSR 81 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 81 (125)
.+.+.++.|+++|+.+++.+..+ -... ..-..+++.. +.+....-.++.+.++|..+.+
T Consensus 69 ~stG~~g~v~~iD~~Tgkv~~~~-l~~~-------------------~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~ 127 (268)
T 3nok_A 69 ESTGHQGTLRQLSLESAQPVWME-RLGN-------------------IFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQ 127 (268)
T ss_dssp EEETTTTEEEECCSSCSSCSEEE-ECTT-------------------CCEEEEEECS-SCEEEEESSSCEEEEEETTTTE
T ss_pred EEcCCCCEEEEEECCCCcEEeEE-CCCC-------------------cceeEEEEeC-CEEEEEEccCCEEEEEECCcCc
Confidence 46778888999999999887766 2221 1223455543 2444445578899999999999
Q ss_pred eeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 82 PLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 82 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
.+..+... ..-..++ +|++.++.+..++.|.++|..+.
T Consensus 128 ~~~ti~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~ 165 (268)
T 3nok_A 128 RERTTRYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGF 165 (268)
T ss_dssp EEEEEECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTC
T ss_pred EEEEEeCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCC
Confidence 99888742 2223444 47777777777999999998765
No 216
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.06 E-value=0.0002 Score=46.70 Aligned_cols=73 Identities=4% Similarity=0.078 Sum_probs=51.0
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEE----eCCCCCce--eEEEEcc-CCCeEEEeecCCeEEEEeCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQT----FKPHTADV--RSIRFSP-SAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~----~~~~~~~v--~~~~~~~-~~~~~~~~~~d~~i~~~~~~~ 121 (125)
....+++++|++..|+.+..++.|+.||..++..... ........ ..++|+| ++.++++-..++.|+.|+...
T Consensus 219 ~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g 298 (409)
T 3hrp_A 219 GKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDG 298 (409)
T ss_dssp SCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTC
T ss_pred CCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCC
Confidence 5678899999554555577788999999887653322 22222222 3899999 577777777889999998764
No 217
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.05 E-value=0.00015 Score=44.87 Aligned_cols=74 Identities=11% Similarity=0.117 Sum_probs=54.1
Q ss_pred CCeEEEEEC----CCCCEE-EEEeCCCcEEEEEcC-CCc-----eeEEeCCCC-CceeEEEEccCCCeEEEeecCCeEEE
Q psy14458 49 SPVSALCVD----PSGRLM-VSGHEDSSCVLYDIR-GSR-----PLQTFKPHT-ADVRSIRFSPSAYYLLTGGYDNKLVL 116 (125)
Q Consensus 49 ~~i~~~~~~----~~~~~~-~~~~~~~~i~~~d~~-~~~-----~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~d~~i~~ 116 (125)
.....++++ |+++.+ ++...++.|.+||.. +++ ....+..+. .....++++++|.++++...++.|..
T Consensus 172 ~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~ 251 (314)
T 1pjx_A 172 QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEV 251 (314)
T ss_dssp SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEE
T ss_pred CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEE
Confidence 345788999 988655 444567899999976 343 233344343 56788999999998888888899999
Q ss_pred EeCCCC
Q psy14458 117 TDLQGT 122 (125)
Q Consensus 117 ~~~~~~ 122 (125)
||.+++
T Consensus 252 ~d~~~g 257 (314)
T 1pjx_A 252 FGPDGG 257 (314)
T ss_dssp ECTTCB
T ss_pred EcCCCC
Confidence 998743
No 218
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.05 E-value=0.00021 Score=49.75 Aligned_cols=72 Identities=17% Similarity=0.192 Sum_probs=50.1
Q ss_pred CeEEEEECCCCCEEEEEeCC-----CcEEEEEcCCC--ceeEEeCCCCCceeEEEEccCCCeEEEeec----CCeEEEEe
Q psy14458 50 PVSALCVDPSGRLMVSGHED-----SSCVLYDIRGS--RPLQTFKPHTADVRSIRFSPSAYYLLTGGY----DNKLVLTD 118 (125)
Q Consensus 50 ~i~~~~~~~~~~~~~~~~~~-----~~i~~~d~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----d~~i~~~~ 118 (125)
.+..+.|+|++++++..+.+ ..|++||+.++ +....+..+...+... +.|++..|+..+. ++.|.+||
T Consensus 269 ~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d 347 (741)
T 1yr2_A 269 RGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVD 347 (741)
T ss_dssp CEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEE
T ss_pred EEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEe
Confidence 57889999999988777644 37999999876 3144454444444444 3488887777665 44599999
Q ss_pred CCCC
Q psy14458 119 LQGT 122 (125)
Q Consensus 119 ~~~~ 122 (125)
+.++
T Consensus 348 ~~~~ 351 (741)
T 1yr2_A 348 LSGS 351 (741)
T ss_dssp CSSS
T ss_pred CCCC
Confidence 8763
No 219
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.04 E-value=0.00032 Score=44.18 Aligned_cols=60 Identities=15% Similarity=0.233 Sum_probs=46.2
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEc-cCCCeEEEee
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFS-PSAYYLLTGG 109 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~ 109 (125)
.....+++++++.++++...++.|..||. +++.+..+......+.+++|. |++..++.++
T Consensus 230 ~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 230 GGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp SEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred CCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence 34678999999988887777788999998 566666666566679999998 8877665444
No 220
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.01 E-value=0.00014 Score=47.18 Aligned_cols=99 Identities=10% Similarity=0.073 Sum_probs=64.7
Q ss_pred CCCeEEEEECCCCcceeeecCCC-CCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeC--CCcEEEEEcCCCce
Q psy14458 6 EDSSCVLYDIRGSRPLQTFKPHT-ADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHE--DSSCVLYDIRGSRP 82 (125)
Q Consensus 6 ~d~~i~v~d~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~i~~~d~~~~~~ 82 (125)
.++.|.+||..+++.+..+.... ..+ ..+.....++++|++++++.++. ++.|.++|+.+++.
T Consensus 107 ~~~~VsviD~~t~~v~~~I~v~~g~r~--------------~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~v 172 (386)
T 3sjl_D 107 RTDYVEVFDPVTLLPTADIELPDAPRF--------------LVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAF 172 (386)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCCCC--------------CBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEE
T ss_pred CCCEEEEEECCCCeEEEEEECCCcccc--------------ccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcE
Confidence 46789999999988877664211 000 00124567899999999888764 68899999999998
Q ss_pred eEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 83 LQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 83 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
+..+..-. + ...+....+.+++.+.||.+.+.++.+
T Consensus 173 v~tI~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 173 KRMLDVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGT 208 (386)
T ss_dssp EEEEECCS--E-EEEEEEETTEEEEEETTSCEEEEECCS
T ss_pred EEEEECCC--c-ceeecCCCceeEEECCCCCEEEEECCC
Confidence 88875321 1 122222344555666677777776654
No 221
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.98 E-value=0.00044 Score=44.12 Aligned_cols=107 Identities=9% Similarity=0.030 Sum_probs=65.1
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCe-EEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPV-SALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
+.++.++.|..+|..+++.+..+....... . .......+ ..... .+..++.++.++.|..+|..++
T Consensus 57 ~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~----~-------~~~~~~~~~~~~~~--~~~~v~v~~~~g~l~a~d~~tG 123 (376)
T 3q7m_A 57 YAADRAGLVKALNADDGKEIWSVSLAEKDG----W-------FSKEPALLSGGVTV--SGGHVYIGSEKAQVYALNTSDG 123 (376)
T ss_dssp EEECTTSEEEEEETTTCCEEEEEECCC-------C-------CSCCCCCEEEEEEE--ETTEEEEEETTSEEEEEETTTC
T ss_pred EEEcCCCeEEEEEccCCceeeeecCccccc----c-------ccccCcccccCceE--eCCEEEEEcCCCEEEEEECCCC
Confidence 456667888888888888776554321000 0 00000122 22222 3567778889999999999999
Q ss_pred ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 81 RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+.+............... .+..++.++.++.+..+|.+++.
T Consensus 124 ~~~W~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~ 164 (376)
T 3q7m_A 124 TVAWQTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGA 164 (376)
T ss_dssp CEEEEEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCC
T ss_pred CEEEEEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCc
Confidence 888776643322222222 23467778889999999987764
No 222
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.95 E-value=0.00042 Score=42.96 Aligned_cols=74 Identities=5% Similarity=-0.014 Sum_probs=54.4
Q ss_pred CCeEEEEECCCCCEE-EEEeCCCcEEEEEc--CCCce-----eEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 49 SPVSALCVDPSGRLM-VSGHEDSSCVLYDI--RGSRP-----LQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~-~~~~~~~~i~~~d~--~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
.....++|+|+++.+ ++.+.++.|.+|++ .++.. +..+..+......++++++|++.++...++.|..||..
T Consensus 149 ~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~ 228 (297)
T 3g4e_A 149 DISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPV 228 (297)
T ss_dssp SBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTT
T ss_pred ccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCC
Confidence 346789999999866 55556788999987 34432 22333334567789999999888888888899999987
Q ss_pred CC
Q psy14458 121 GT 122 (125)
Q Consensus 121 ~~ 122 (125)
++
T Consensus 229 tG 230 (297)
T 3g4e_A 229 TG 230 (297)
T ss_dssp TC
T ss_pred Cc
Confidence 54
No 223
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.95 E-value=0.00019 Score=47.44 Aligned_cols=107 Identities=17% Similarity=0.310 Sum_probs=69.4
Q ss_pred eeecCCCeEEEEECCCC----cceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCC------Cc
Q psy14458 2 VSGHEDSSCVLYDIRGS----RPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHED------SS 71 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~------~~ 71 (125)
+++..+++|.++|+.+. +....+.... + .. ......-..+...|++ .+++...+ +.
T Consensus 100 v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~--~----------~~-~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~ 165 (462)
T 2ece_A 100 VPGLRSSRIYIIDTKPNPREPKIIKVIEPEE--V----------KK-VSGYSRLHTVHCGPDA-IYISALGNEEGEGPGG 165 (462)
T ss_dssp EEBTTTCCEEEEECCSCTTSCEEEEEECHHH--H----------HH-HHCEEEEEEEEECSSC-EEEEEEEETTSCSCCE
T ss_pred EccCCCCeEEEEECCCCCCCceeeeeechhh--c----------cc-ccCCCcccceeECCCe-EEEEcCCCcCCCCCCe
Confidence 56777888999998654 2333331000 0 00 0000234567788999 66655444 78
Q ss_pred EEEEEcCCCceeEEeCCCCCc---eeEEEEccCCCeEEEee-------------------cCCeEEEEeCCCC
Q psy14458 72 CVLYDIRGSRPLQTFKPHTAD---VRSIRFSPSAYYLLTGG-------------------YDNKLVLTDLQGT 122 (125)
Q Consensus 72 i~~~d~~~~~~~~~~~~~~~~---v~~~~~~~~~~~~~~~~-------------------~d~~i~~~~~~~~ 122 (125)
+.++|..+.+.+..+...... -..+.|+|+++.+++.. .+.+|.+||+.++
T Consensus 166 v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~ 238 (462)
T 2ece_A 166 ILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR 238 (462)
T ss_dssp EEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT
T ss_pred EEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC
Confidence 999999999988888732221 23488899999888874 4788999999864
No 224
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.94 E-value=0.00062 Score=42.00 Aligned_cols=94 Identities=14% Similarity=0.056 Sum_probs=63.3
Q ss_pred CCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEe
Q psy14458 7 DSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTF 86 (125)
Q Consensus 7 d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~ 86 (125)
+++|+++|+.+++.+..+..... .....+++.. +...++.-.++.+.++|..+.+.+..+
T Consensus 43 ~s~v~~iD~~tg~v~~~i~l~~~-------------------~fgeGi~~~g-~~lyv~t~~~~~v~viD~~t~~v~~~i 102 (266)
T 2iwa_A 43 RSSVRQVALQTGKVENIHKMDDS-------------------YFGEGLTLLN-EKLYQVVWLKNIGFIYDRRTLSNIKNF 102 (266)
T ss_dssp TCEEEEEETTTCCEEEEEECCTT-------------------CCEEEEEEET-TEEEEEETTCSEEEEEETTTTEEEEEE
T ss_pred CCEEEEEECCCCCEEEEEecCCC-------------------cceEEEEEeC-CEEEEEEecCCEEEEEECCCCcEEEEE
Confidence 57899999998888776652221 2233455542 244455557789999999999988888
Q ss_pred CCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 87 KPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 87 ~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
..-... ...+++|++.++.+..++.+.++|..+.
T Consensus 103 ~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~ 136 (266)
T 2iwa_A 103 THQMKD--GWGLATDGKILYGSDGTSILYEIDPHTF 136 (266)
T ss_dssp ECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTC
T ss_pred ECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCC
Confidence 632122 2335568777766667899999998774
No 225
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.93 E-value=0.00018 Score=44.35 Aligned_cols=96 Identities=7% Similarity=0.068 Sum_probs=66.6
Q ss_pred cCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeE
Q psy14458 5 HEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQ 84 (125)
Q Consensus 5 ~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~ 84 (125)
-.++.+.++|..+.+.+..+..... .. ..+++++..++.+..++.|.++|..+.+...
T Consensus 83 ~~~~~v~viD~~t~~v~~~i~~g~~-------------------~g---~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~ 140 (266)
T 2iwa_A 83 WLKNIGFIYDRRTLSNIKNFTHQMK-------------------DG---WGLATDGKILYGSDGTSILYEIDPHTFKLIK 140 (266)
T ss_dssp TTCSEEEEEETTTTEEEEEEECCSS-------------------SC---CEEEECSSSEEEECSSSEEEEECTTTCCEEE
T ss_pred ecCCEEEEEECCCCcEEEEEECCCC-------------------Ce---EEEEECCCEEEEECCCCeEEEEECCCCcEEE
Confidence 3567888888888777766642210 11 2344567667677778899999999988777
Q ss_pred EeCCCC--C---ceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 85 TFKPHT--A---DVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 85 ~~~~~~--~---~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.+.-.. . ..+.+.|. ++..++....++.|.+.|..++.
T Consensus 141 ~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~ 183 (266)
T 2iwa_A 141 KHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGT 183 (266)
T ss_dssp EEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCC
T ss_pred EEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCc
Confidence 766221 2 35677777 77777777678999999998764
No 226
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.92 E-value=0.00015 Score=45.90 Aligned_cols=115 Identities=7% Similarity=0.011 Sum_probs=67.1
Q ss_pred CCCeEEEEECCCCcceeeecCCCCCe---EEEEecCcccccccC------CCCCeEEEEECCCCCEEEEEeCCC-cEEEE
Q psy14458 6 EDSSCVLYDIRGSRPLQTFKPHTADV---RSIHLDHYTTEAGTR------QGSPVSALCVDPSGRLMVSGHEDS-SCVLY 75 (125)
Q Consensus 6 ~d~~i~v~d~~~~~~~~~~~~~~~~i---~~~~~~~~~~~~~~~------~~~~i~~~~~~~~~~~~~~~~~~~-~i~~~ 75 (125)
.++.|.+||+.+++....+.++.... ..+..++........ ....+..++++|+++.++.+...+ .++.+
T Consensus 143 ~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~ 222 (343)
T 2qe8_A 143 DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRI 222 (343)
T ss_dssp GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEE
T ss_pred CCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEE
Confidence 56788999988777655554321100 111112111110000 113468899999998888877665 45555
Q ss_pred EcC---CCc-----eeE--EeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 76 DIR---GSR-----PLQ--TFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 76 d~~---~~~-----~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
+.. .+. ... ...++......++++++|.++++...++.|..||..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~ 277 (343)
T 2qe8_A 223 KSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSA 277 (343)
T ss_dssp EHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETT
T ss_pred EHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECC
Confidence 532 110 000 111223345679999999999999999999999983
No 227
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.92 E-value=0.0005 Score=42.75 Aligned_cols=58 Identities=12% Similarity=0.068 Sum_probs=41.1
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeC---C-CCCceeEEEEccCCCeEEE
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFK---P-HTADVRSIRFSPSAYYLLT 107 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~---~-~~~~v~~~~~~~~~~~~~~ 107 (125)
..+..++++++++++++...++.|..|+.. ++...... . ....++.+.++|+|+++++
T Consensus 86 ~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~t 147 (305)
T 3dr2_A 86 AFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFT 147 (305)
T ss_dssp SCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEE
T ss_pred CccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEe
Confidence 567899999999977776666889999875 44322111 1 1134678999999998886
No 228
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.90 E-value=0.00061 Score=43.45 Aligned_cols=96 Identities=14% Similarity=0.102 Sum_probs=63.6
Q ss_pred eeecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCc
Q psy14458 2 VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSR 81 (125)
Q Consensus 2 ~t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 81 (125)
+.++.++.+..+|..+++.+..... .....+.. .+..+..++.++.+..+|..+++
T Consensus 243 ~~~~~~g~l~~~d~~tG~~~w~~~~----------------------~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~ 298 (376)
T 3q7m_A 243 FALAYNGNLTALDLRSGQIMWKREL----------------------GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGV 298 (376)
T ss_dssp EEECTTSCEEEEETTTCCEEEEECC----------------------CCEEEEEE--ETTEEEEEETTCCEEEEETTTCC
T ss_pred EEEecCcEEEEEECCCCcEEeeccC----------------------CCCCCceE--ECCEEEEEcCCCeEEEEECCCCc
Confidence 3455677788888777776655431 11223333 35677888889999999999998
Q ss_pred eeEEeCCC-CCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 82 PLQTFKPH-TADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 82 ~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
........ ......... .+..++.++.++.+.++|.+++.
T Consensus 299 ~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 299 TLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGR 339 (376)
T ss_dssp EEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCC
T ss_pred EEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCc
Confidence 87766522 222223333 34578888889999999988764
No 229
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.88 E-value=0.0002 Score=44.17 Aligned_cols=95 Identities=6% Similarity=-0.021 Sum_probs=68.1
Q ss_pred cCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeE
Q psy14458 5 HEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQ 84 (125)
Q Consensus 5 ~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~ 84 (125)
-.++.+.+||..+.+.+..+.... .. ..++ +++..++.+..++.|.++|..+.+.+.
T Consensus 113 w~~~~v~V~D~~Tl~~~~ti~~~~--------------------eG-wGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~ 169 (268)
T 3nok_A 113 WTEGLLFTWSGMPPQRERTTRYSG--------------------EG-WGLC--YWNGKLVRSDGGTMLTFHEPDGFALVG 169 (268)
T ss_dssp SSSCEEEEEETTTTEEEEEEECSS--------------------CC-CCEE--EETTEEEEECSSSEEEEECTTTCCEEE
T ss_pred ccCCEEEEEECCcCcEEEEEeCCC--------------------ce-eEEe--cCCCEEEEECCCCEEEEEcCCCCeEEE
Confidence 457888899998888887776322 11 2333 457777777778999999999988877
Q ss_pred EeCC--CCC---ceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 85 TFKP--HTA---DVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 85 ~~~~--~~~---~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.+.. +.. .++.+.|. +|++++....+..|.+.|.+++.
T Consensus 170 ~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~ 212 (268)
T 3nok_A 170 AVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGT 212 (268)
T ss_dssp EEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCB
T ss_pred EEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCc
Confidence 7663 222 34556766 78777777778899999998764
No 230
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.88 E-value=0.00016 Score=44.50 Aligned_cols=95 Identities=12% Similarity=0.193 Sum_probs=65.9
Q ss_pred cCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeE
Q psy14458 5 HEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQ 84 (125)
Q Consensus 5 ~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~ 84 (125)
-.++.+.+||..+.+.+..+.... ....+.+++..++.++.++.|.++|..+.+.+.
T Consensus 104 w~~~~v~v~D~~t~~~~~ti~~~~-----------------------eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~ 160 (262)
T 3nol_A 104 WKNGLGFVWNIRNLRQVRSFNYDG-----------------------EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVR 160 (262)
T ss_dssp SSSSEEEEEETTTCCEEEEEECSS-----------------------CCCCEEECSSCEEECCSSSEEEEECTTTCSEEE
T ss_pred eeCCEEEEEECccCcEEEEEECCC-----------------------CceEEecCCCEEEEECCCCeEEEEcCCCCeEEE
Confidence 357788888888888877776322 111223456667766667889999999988777
Q ss_pred EeCCC--CCc---eeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 85 TFKPH--TAD---VRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 85 ~~~~~--~~~---v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.+... ..+ ++.+.|. +|++++....+..|.+.|.+++.
T Consensus 161 ~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~ 203 (262)
T 3nol_A 161 TITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGK 203 (262)
T ss_dssp EEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCB
T ss_pred EEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCc
Confidence 76532 222 3456775 78877777788899999988764
No 231
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.85 E-value=0.00031 Score=42.77 Aligned_cols=95 Identities=11% Similarity=0.100 Sum_probs=66.3
Q ss_pred cCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeE
Q psy14458 5 HEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQ 84 (125)
Q Consensus 5 ~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~ 84 (125)
-.++.+.+||..+.+.+..+.... .. ..++ +++..++.+..++.|.++|..+.+.+.
T Consensus 82 w~~~~v~v~D~~tl~~~~ti~~~~--------------------~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~ 138 (243)
T 3mbr_X 82 WRNHEGFVYDLATLTPRARFRYPG--------------------EG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVG 138 (243)
T ss_dssp SSSSEEEEEETTTTEEEEEEECSS--------------------CC-CEEE--ECSSCEEEECSSSEEEEECTTTCCEEE
T ss_pred eeCCEEEEEECCcCcEEEEEeCCC--------------------Cc-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEE
Confidence 457788888988888887776322 11 2333 456666666778899999999988777
Q ss_pred EeCC--CCC---ceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 85 TFKP--HTA---DVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 85 ~~~~--~~~---~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.+.- +.. .++.+.+. +|+.++....+..|.+.|.+++.
T Consensus 139 ~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~ 181 (243)
T 3mbr_X 139 SIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGK 181 (243)
T ss_dssp EEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCB
T ss_pred EEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCC
Confidence 7663 222 34455654 77777777778899999988764
No 232
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.80 E-value=0.002 Score=40.81 Aligned_cols=98 Identities=13% Similarity=0.123 Sum_probs=59.2
Q ss_pred CCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEE-EEEe---CCCcEEEEEcCCCce
Q psy14458 7 DSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLM-VSGH---EDSSCVLYDIRGSRP 82 (125)
Q Consensus 7 d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~---~~~~i~~~d~~~~~~ 82 (125)
+.+|.+||+.+++.+..+..... .......+..+++++++..+ ++-. .++.|.+||..+++.
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~~~~--------------~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~ 157 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYLPPP--------------ITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLA 157 (343)
T ss_dssp CCEEEEEETTTTEEEEEEECCTT--------------TSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCE
T ss_pred CCeEEEEECCCCeEEEEEECChh--------------hcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCE
Confidence 45677777766665444332110 00112456889999865444 5444 578899999987765
Q ss_pred eEEeCCCC-----------------------------CceeEEEEccCCCeEEEeecCC-eEEEEe
Q psy14458 83 LQTFKPHT-----------------------------ADVRSIRFSPSAYYLLTGGYDN-KLVLTD 118 (125)
Q Consensus 83 ~~~~~~~~-----------------------------~~v~~~~~~~~~~~~~~~~~d~-~i~~~~ 118 (125)
...+..|. ..+..++++|+++.++.+..++ .+..++
T Consensus 158 ~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 158 ARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp EEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred EEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence 55443210 1357799999998887776554 455544
No 233
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.80 E-value=0.00046 Score=42.95 Aligned_cols=65 Identities=12% Similarity=0.089 Sum_probs=38.6
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeC
Q psy14458 50 PVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDL 119 (125)
Q Consensus 50 ~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~ 119 (125)
.+.++...+++.+++.. +.+..+| .+++....+......+.++...+++. +..++.++.+..+|.
T Consensus 178 ~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~ 242 (330)
T 3hxj_A 178 ITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP 242 (330)
T ss_dssp CCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT
T ss_pred ceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC
Confidence 34555565566544433 6777787 66666665554455566777766664 444455566666654
No 234
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.80 E-value=0.0017 Score=39.95 Aligned_cols=96 Identities=16% Similarity=0.144 Sum_probs=63.8
Q ss_pred eecCCC--eEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEE-EeCCCcEEEEEcCC
Q psy14458 3 SGHEDS--SCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVS-GHEDSSCVLYDIRG 79 (125)
Q Consensus 3 t~~~d~--~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~i~~~d~~~ 79 (125)
+.+.++ +|+++|+.+++.+..+..... ..-..++.. +..+.. .-.++.+.++|..+
T Consensus 58 stG~~g~S~v~~vD~~Tgkv~~~~~l~~~-------------------~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t 116 (262)
T 3nol_A 58 STGLNGRSSIRKVDIESGKTLQQIELGKR-------------------YFGEGISDW--KDKIVGLTWKNGLGFVWNIRN 116 (262)
T ss_dssp EEEETTEEEEEEECTTTCCEEEEEECCTT-------------------CCEEEEEEE--TTEEEEEESSSSEEEEEETTT
T ss_pred ECCCCCCceEEEEECCCCcEEEEEecCCc-------------------cceeEEEEe--CCEEEEEEeeCCEEEEEECcc
Confidence 445554 899999999988777653321 112234443 434444 44688899999999
Q ss_pred CceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 80 SRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 80 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
.+.+..+.... .=..++ +++..++....++.|.++|..+.
T Consensus 117 ~~~~~ti~~~~-eG~glt--~dg~~L~~SdGs~~i~~iDp~T~ 156 (262)
T 3nol_A 117 LRQVRSFNYDG-EGWGLT--HNDQYLIMSDGTPVLRFLDPESL 156 (262)
T ss_dssp CCEEEEEECSS-CCCCEE--ECSSCEEECCSSSEEEEECTTTC
T ss_pred CcEEEEEECCC-CceEEe--cCCCEEEEECCCCeEEEEcCCCC
Confidence 99998887422 223344 57777777777888999998764
No 235
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.80 E-value=0.00027 Score=48.11 Aligned_cols=54 Identities=9% Similarity=-0.064 Sum_probs=38.3
Q ss_pred CCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 69 DSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 69 ~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
++.|..+|..+++.+..+.. ...+....+...+..++.++.|+.++.+|.+++.
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~-~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~ 496 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWE-KFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGK 496 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred CCeEEEEECCCCCEEEEecC-CCCccceeEEECCCEEEEEcCCCeEEEEECCCCC
Confidence 57899999999988777652 2223332233345567778999999999998764
No 236
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.79 E-value=0.00042 Score=43.11 Aligned_cols=64 Identities=13% Similarity=0.121 Sum_probs=45.0
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEe
Q psy14458 50 PVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTD 118 (125)
Q Consensus 50 ~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~ 118 (125)
.+.++...+++. +..++.++.|..+|.. ++....+......+.++...+++.+++.. +.+..+|
T Consensus 138 ~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d 201 (330)
T 3hxj_A 138 IYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN 201 (330)
T ss_dssp CCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC
T ss_pred eeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC
Confidence 345556666666 5556778999999988 77766666555567777777777765554 6788887
No 237
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.77 E-value=6.5e-05 Score=51.99 Aligned_cols=74 Identities=18% Similarity=0.300 Sum_probs=53.2
Q ss_pred CCCeEEEEECCCCCEEEE-----EeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCe---------
Q psy14458 48 GSPVSALCVDPSGRLMVS-----GHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNK--------- 113 (125)
Q Consensus 48 ~~~i~~~~~~~~~~~~~~-----~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~--------- 113 (125)
...+..++|||++++++- |++...|+++|+.+++.+.... .......+.|+ |++.|+.++.+..
T Consensus 128 ~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~ 205 (693)
T 3iuj_A 128 TTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELSART 205 (693)
T ss_dssp CCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTTEEEEEESSCCC-------C
T ss_pred cEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCCEEEEEEecCcccccccccC
Confidence 356889999999998874 3333569999999988654311 11113568899 9999988887743
Q ss_pred ----EEEEeCCCCC
Q psy14458 114 ----LVLTDLQGTM 123 (125)
Q Consensus 114 ----i~~~~~~~~~ 123 (125)
|++|++.+..
T Consensus 206 ~~~~v~~~~lgt~~ 219 (693)
T 3iuj_A 206 DQHKVYFHRLGTAQ 219 (693)
T ss_dssp CCCEEEEEETTSCG
T ss_pred CCcEEEEEECCCCc
Confidence 9999987653
No 238
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.76 E-value=0.00011 Score=48.23 Aligned_cols=69 Identities=12% Similarity=0.050 Sum_probs=55.0
Q ss_pred EEECCCCCEEEEEeC----------CCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCC-eEEEee-cCCeEEEEeCCC
Q psy14458 54 LCVDPSGRLMVSGHE----------DSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAY-YLLTGG-YDNKLVLTDLQG 121 (125)
Q Consensus 54 ~~~~~~~~~~~~~~~----------~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~-~d~~i~~~~~~~ 121 (125)
++++|++..++.... .+.|.+.|..+.+.+..+.. ......+.|+||++ .+++.. .++.|.++|+.+
T Consensus 324 va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v-g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t 402 (426)
T 3c75_H 324 TAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIEL-GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAAT 402 (426)
T ss_dssp EEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEETTT
T ss_pred eEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEEC-CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCC
Confidence 678888877666542 35799999999998888862 33578899999998 888877 599999999987
Q ss_pred CC
Q psy14458 122 TM 123 (125)
Q Consensus 122 ~~ 123 (125)
..
T Consensus 403 ~k 404 (426)
T 3c75_H 403 GE 404 (426)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 239
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.74 E-value=0.00022 Score=45.96 Aligned_cols=69 Identities=6% Similarity=-0.120 Sum_probs=52.8
Q ss_pred EEECCCCCEEEEEeC---------CCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCC-eEEEee-cCCeEEEEeCCCC
Q psy14458 54 LCVDPSGRLMVSGHE---------DSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAY-YLLTGG-YDNKLVLTDLQGT 122 (125)
Q Consensus 54 ~~~~~~~~~~~~~~~---------~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~-~d~~i~~~~~~~~ 122 (125)
++++|++..++.+.. .+.+.++|+.+++.+..+... .....+.|+||++ .+++.. .++.|.++|+.+.
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg-~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~ 347 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG-HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECC-CCcceEEECCCCCEEEEEccCCCCeEEEEECCCC
Confidence 679999887776533 235669999999888777633 3578999999997 556666 5999999999875
Q ss_pred C
Q psy14458 123 M 123 (125)
Q Consensus 123 ~ 123 (125)
.
T Consensus 348 k 348 (368)
T 1mda_H 348 Q 348 (368)
T ss_dssp E
T ss_pred c
Confidence 3
No 240
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.72 E-value=0.00066 Score=42.19 Aligned_cols=70 Identities=9% Similarity=-0.054 Sum_probs=53.7
Q ss_pred CCeEEEEECCCCC-EEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCC
Q psy14458 49 SPVSALCVDPSGR-LMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 49 ~~i~~~~~~~~~~-~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~ 120 (125)
......+|+|+++ ++++...++.|..|+. +++ ...+......+..+.++++|+++++...++.|..|+..
T Consensus 45 ~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~ 115 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD 115 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred cCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC
Confidence 5677899999998 6677778899999987 444 33444455678899999999977776667889888875
No 241
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.72 E-value=0.00034 Score=48.41 Aligned_cols=54 Identities=6% Similarity=0.004 Sum_probs=40.7
Q ss_pred CCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 69 DSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 69 ~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+|.|..||..+++.+...... .......+...+.+++.++.|+.++.||.+++.
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~ 490 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGE 490 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred cceEEEEeCCCCcEEEEccCC-CCCcCceeEeCCCEEEEECCcccchhhhhhcCh
Confidence 478999999999988776632 233333444567788889999999999998764
No 242
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.71 E-value=0.00015 Score=50.41 Aligned_cols=80 Identities=13% Similarity=0.145 Sum_probs=57.5
Q ss_pred CCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEe
Q psy14458 7 DSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTF 86 (125)
Q Consensus 7 d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~ 86 (125)
++.|..||+.+++.+..+..+. ....-.+...+.+++.++.|+.++.||.++++.+..+
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~---------------------~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~ 512 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVT---------------------IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQ 512 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESS---------------------SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ceeEEEEECCCCCeEeEccCCC---------------------CccCccceECCCEEEEECCCCcEEEEECCCCccceee
Confidence 5889999999999887776432 1112234446788999999999999999999999888
Q ss_pred CCCCCc-eeEEEEccCCCeEEE
Q psy14458 87 KPHTAD-VRSIRFSPSAYYLLT 107 (125)
Q Consensus 87 ~~~~~~-v~~~~~~~~~~~~~~ 107 (125)
+..... ..-+.|..+|+.+++
T Consensus 513 ~~~~~~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 513 PAASGVMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp ECSSCCCSCCEEEEETTEEEEE
T ss_pred eCCCCcccCceEEEECCEEEEE
Confidence 743322 234667778864433
No 243
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.67 E-value=0.001 Score=45.43 Aligned_cols=54 Identities=15% Similarity=0.071 Sum_probs=38.1
Q ss_pred CCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 69 DSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 69 ~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+|.|..||+.+++.+...... ..+..-.....+..++.++.|+.++.+|.+++.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~ 518 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGK 518 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred cceEEEEECCCCCEEEEecCC-CCCcccceEeCCCEEEEECCCCcEEEEECCCCC
Confidence 578999999999887766522 222221122245677779999999999998874
No 244
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.62 E-value=0.0019 Score=42.79 Aligned_cols=94 Identities=12% Similarity=0.143 Sum_probs=64.8
Q ss_pred CeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEe-------------------C
Q psy14458 8 SSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGH-------------------E 68 (125)
Q Consensus 8 ~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-------------------~ 68 (125)
+.|.++|..+.+.+........+ ...-..+-|+|+++.+++.. .
T Consensus 164 g~v~vlD~~T~~v~~~~~~~~~~-----------------~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~ 226 (462)
T 2ece_A 164 GGILMLDHYSFEPLGKWEIDRGD-----------------QYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRY 226 (462)
T ss_dssp CEEEEECTTTCCEEEECCSBCTT-----------------CCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHS
T ss_pred CeEEEEECCCCeEEEEEccCCCC-----------------ccccceEEECCCCCEEEEccCcCccccccccchhhhhhcc
Confidence 67888888887777666522211 02234577899999888874 3
Q ss_pred CCcEEEEEcCCCceeEEeCCC-C-CceeEEEE--ccCCCeEEEeec------CCeEEEEe
Q psy14458 69 DSSCVLYDIRGSRPLQTFKPH-T-ADVRSIRF--SPSAYYLLTGGY------DNKLVLTD 118 (125)
Q Consensus 69 ~~~i~~~d~~~~~~~~~~~~~-~-~~v~~~~~--~~~~~~~~~~~~------d~~i~~~~ 118 (125)
...|.+||+.+++.+..+..- . .....+.| +|++++...+++ +++|.+|.
T Consensus 227 ~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~ 286 (462)
T 2ece_A 227 GNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWF 286 (462)
T ss_dssp CCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEE
T ss_pred CCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEE
Confidence 688999999998877777642 1 34556766 999998887774 55776554
No 245
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.62 E-value=0.004 Score=39.15 Aligned_cols=72 Identities=7% Similarity=-0.024 Sum_probs=51.9
Q ss_pred CCeEEEEECCCCCEEEE-EeCCCcEEEEEcC--CC-c-----eeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeC
Q psy14458 49 SPVSALCVDPSGRLMVS-GHEDSSCVLYDIR--GS-R-----PLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDL 119 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~-~~~~~~i~~~d~~--~~-~-----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~ 119 (125)
.....++|+|+++.++. ...++.|.+|+.. ++ + .+..+.........+.++++|.++++...++.|..||.
T Consensus 179 ~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~ 258 (326)
T 2ghs_A 179 SIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT 258 (326)
T ss_dssp SSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT
T ss_pred cccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC
Confidence 34678999999986644 4557889999985 45 3 12233333455678999999988887777788999987
Q ss_pred C
Q psy14458 120 Q 120 (125)
Q Consensus 120 ~ 120 (125)
.
T Consensus 259 ~ 259 (326)
T 2ghs_A 259 D 259 (326)
T ss_dssp T
T ss_pred C
Confidence 4
No 246
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.62 E-value=0.0034 Score=38.25 Aligned_cols=97 Identities=16% Similarity=0.096 Sum_probs=64.1
Q ss_pred eecCC--CeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q psy14458 3 SGHED--SSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGS 80 (125)
Q Consensus 3 t~~~d--~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 80 (125)
+.+.+ .+|+.+|+.+++.+..+..... ..-..+++.. +......-.++.+.++|..+.
T Consensus 36 stG~~g~S~v~~vD~~tgkv~~~~~l~~~-------------------~fgeGi~~~~-~~ly~ltw~~~~v~v~D~~tl 95 (243)
T 3mbr_X 36 STGETGRSSVRKVDLETGRILQRAEVPPP-------------------YFGAGIVAWR-DRLIQLTWRNHEGFVYDLATL 95 (243)
T ss_dssp EECCTTSCEEEEEETTTCCEEEEEECCTT-------------------CCEEEEEEET-TEEEEEESSSSEEEEEETTTT
T ss_pred ECCCCCCceEEEEECCCCCEEEEEeCCCC-------------------cceeEEEEeC-CEEEEEEeeCCEEEEEECCcC
Confidence 34443 5899999999988877653321 1112334432 334444457889999999999
Q ss_pred ceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 81 RPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
+.+..+.... .=..++ +++..++.+..++.|.++|..+.
T Consensus 96 ~~~~ti~~~~-~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~ 134 (243)
T 3mbr_X 96 TPRARFRYPG-EGWALT--SDDSHLYMSDGTAVIRKLDPDTL 134 (243)
T ss_dssp EEEEEEECSS-CCCEEE--ECSSCEEEECSSSEEEEECTTTC
T ss_pred cEEEEEeCCC-CceEEe--eCCCEEEEECCCCeEEEEeCCCC
Confidence 9998887432 223444 46766666667889999998764
No 247
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.55 E-value=0.001 Score=45.44 Aligned_cols=72 Identities=7% Similarity=0.023 Sum_probs=53.7
Q ss_pred CCeEEEEECCCCCEEEEEe-CCCcEEEEEcCCCc------------eeEEeCCCCCceeEEEEccCCCeEEEeecCCeEE
Q psy14458 49 SPVSALCVDPSGRLMVSGH-EDSSCVLYDIRGSR------------PLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLV 115 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~------------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~ 115 (125)
....++.++|+|++++.++ .+..|.++|+.+.+ ...... -.....+++|+|+|...++.-.|+++.
T Consensus 277 ~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~~dG~aY~t~~ldsqV~ 355 (595)
T 1fwx_A 277 NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDGRGNAYTSLFLDSQVV 355 (595)
T ss_dssp SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEECTTSEEEEEETTTTEEE
T ss_pred CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEEECCCCeEEEEEecCCcEE
Confidence 4567899999998776654 67889999998653 223333 334578899999995556666799999
Q ss_pred EEeCCC
Q psy14458 116 LTDLQG 121 (125)
Q Consensus 116 ~~~~~~ 121 (125)
.||+.+
T Consensus 356 kwdi~~ 361 (595)
T 1fwx_A 356 KWNIED 361 (595)
T ss_dssp EEEHHH
T ss_pred EEEhhH
Confidence 999865
No 248
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.52 E-value=0.0011 Score=45.99 Aligned_cols=79 Identities=11% Similarity=0.148 Sum_probs=56.1
Q ss_pred CeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeC
Q psy14458 8 SSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFK 87 (125)
Q Consensus 8 ~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 87 (125)
+.|..||+.+++.+..+.... ......+...+..++.++.+|.+++||..+++.+..+.
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~---------------------~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~ 515 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVS---------------------PWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAP 515 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESS---------------------SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cEEEEEeCCCCcEEeecCCCC---------------------CCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeee
Confidence 789999999998877765321 22223344567788889999999999999999999887
Q ss_pred CCC-CceeEEEEccCCCeEEE
Q psy14458 88 PHT-ADVRSIRFSPSAYYLLT 107 (125)
Q Consensus 88 ~~~-~~v~~~~~~~~~~~~~~ 107 (125)
... ..-.-+.|.++|+.++.
T Consensus 516 ~~~~~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 516 TGTGVVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp CSSCCCSCCEEEEETTEEEEE
T ss_pred CCCCcccCCEEEEeCCEEEEE
Confidence 433 22234667778865443
No 249
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.35 E-value=0.0022 Score=45.00 Aligned_cols=71 Identities=10% Similarity=0.047 Sum_probs=47.4
Q ss_pred EEEEECCCCCEEEEEeCC-----CcEEEEEcCCCce--eEEeC-CCCCceeEEEEccCCCeEEEeec---CCeEEEEeCC
Q psy14458 52 SALCVDPSGRLMVSGHED-----SSCVLYDIRGSRP--LQTFK-PHTADVRSIRFSPSAYYLLTGGY---DNKLVLTDLQ 120 (125)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~-----~~i~~~d~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~~~~~~~---d~~i~~~~~~ 120 (125)
..++|+|+++.|+....+ ..|+.+++.+++. ...+. ........+.|+|||++|+..+. ...|.++|+.
T Consensus 224 ~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~ 303 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLR 303 (751)
T ss_dssp SCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESS
T ss_pred eeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECC
Confidence 467899999877666554 2578888876542 23332 23344567899999998876552 4458888887
Q ss_pred CC
Q psy14458 121 GT 122 (125)
Q Consensus 121 ~~ 122 (125)
++
T Consensus 304 ~~ 305 (751)
T 2xe4_A 304 KG 305 (751)
T ss_dssp SC
T ss_pred CC
Confidence 64
No 250
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.33 E-value=0.0032 Score=43.22 Aligned_cols=55 Identities=11% Similarity=-0.051 Sum_probs=37.9
Q ss_pred CCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 68 EDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 68 ~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
..|.+..||+.+++.+.... +..++..-...-.+..++.++.|+.++.+|.+++.
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~-~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~ 505 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKM-ERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGD 505 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEE-ESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred CcCeEEEEECCCCCEEeEec-CCCCccCcceEecCCEEEEECCCCeEEEEECCCCC
Confidence 34789999999998877665 12222221122255677778999999999998875
No 251
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.14 E-value=0.011 Score=41.03 Aligned_cols=117 Identities=9% Similarity=0.047 Sum_probs=71.7
Q ss_pred CCeEEEEECCCCcceeeecCCC-CCeEE-----E-----EecCcccccccCCCCCeEEEEECCCCCEEEEEeCCC-----
Q psy14458 7 DSSCVLYDIRGSRPLQTFKPHT-ADVRS-----I-----HLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDS----- 70 (125)
Q Consensus 7 d~~i~v~d~~~~~~~~~~~~~~-~~i~~-----~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~----- 70 (125)
++.|..+|+.+++.+..+.... .+... + .|.+.........+.....++++|+...++.+..++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~ 256 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR 256 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence 6899999999999888765311 00000 0 000000000001112234578888888888887665
Q ss_pred --------------cEEEEEcCCCceeEEeCC--CC-------CceeEEEEccCCC---eEEEeecCCeEEEEeCCCCC
Q psy14458 71 --------------SCVLYDIRGSRPLQTFKP--HT-------ADVRSIRFSPSAY---YLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 71 --------------~i~~~d~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~~~~~~~d~~i~~~~~~~~~ 123 (125)
.|..+|..+++.+..+.. |. .+.....+..+|+ .++.++.+|.++++|..++.
T Consensus 257 ~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 335 (668)
T 1kv9_A 257 EVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGK 335 (668)
T ss_dssp HHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred CCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCC
Confidence 399999999998887763 32 2222223334665 68889999999999988764
No 252
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.00 E-value=0.034 Score=36.84 Aligned_cols=71 Identities=11% Similarity=0.215 Sum_probs=54.1
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEEcCCCc------------eeEEeCC------CCCceeEEEEcc---CCCeEEEe
Q psy14458 50 PVSALCVDPSGRLMVSGHEDSSCVLYDIRGSR------------PLQTFKP------HTADVRSIRFSP---SAYYLLTG 108 (125)
Q Consensus 50 ~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~------------~~~~~~~------~~~~v~~~~~~~---~~~~~~~~ 108 (125)
.+..+.++|+|.+++..+ +..|.|..+..+. ..+.+.. ...+|..+.|+| ++..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 577899999999999885 5578888876321 1122221 246799999999 46789999
Q ss_pred ecCCeEEEEeCCC
Q psy14458 109 GYDNKLVLTDLQG 121 (125)
Q Consensus 109 ~~d~~i~~~~~~~ 121 (125)
..|++|++||+..
T Consensus 146 tsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 146 KEDDTITMFDILN 158 (452)
T ss_dssp ETTSCEEEEETTC
T ss_pred ecCCEEEEEEccc
Confidence 9999999999985
No 253
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.97 E-value=0.023 Score=34.44 Aligned_cols=73 Identities=15% Similarity=0.216 Sum_probs=46.0
Q ss_pred CCeEEEEECCCCCEE-EEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCC-CeEEEeec--CCeEEEEeCCC
Q psy14458 49 SPVSALCVDPSGRLM-VSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSA-YYLLTGGY--DNKLVLTDLQG 121 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~-~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~--d~~i~~~~~~~ 121 (125)
.....+++++++..+ ++-...+.|.+++...................++++|++ .++++... .+.|..+++..
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg 155 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG 155 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC
Confidence 467899999976544 444556789999876433222222222456789999954 44454433 46788887754
No 254
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.84 E-value=0.015 Score=39.93 Aligned_cols=112 Identities=8% Similarity=0.022 Sum_probs=61.0
Q ss_pred eecC-CCeEEEEEC-CCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCE----EEEEeCCCcEEEEE
Q psy14458 3 SGHE-DSSCVLYDI-RGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRL----MVSGHEDSSCVLYD 76 (125)
Q Consensus 3 t~~~-d~~i~v~d~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~~~~~~~i~~~d 76 (125)
.++. ++.|.-+|+ .+++.+..+......- ......+......++++|.+.. ++.++.++.|..+|
T Consensus 67 v~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~---------~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlD 137 (599)
T 1w6s_A 67 IHTSFPNNTFALGLDDPGTILWQDKPKQNPA---------ARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALN 137 (599)
T ss_dssp EECSTTTCEEEEETTCTTSEEEEECCCCCGG---------GGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEE
T ss_pred EEeCCCCEEEEEeCCCCCcEEEEECCCCCcc---------ccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEE
Confidence 3444 677777887 7777776655322100 0000000001122344333334 78888999999999
Q ss_pred cCCCceeEEeCCCCC----ceeEEEEccCCCeEEEee-----cCCeEEEEeCCCCC
Q psy14458 77 IRGSRPLQTFKPHTA----DVRSIRFSPSAYYLLTGG-----YDNKLVLTDLQGTM 123 (125)
Q Consensus 77 ~~~~~~~~~~~~~~~----~v~~~~~~~~~~~~~~~~-----~d~~i~~~~~~~~~ 123 (125)
..+++.+........ .+.+--.-.++..++..+ .++.|+.+|.+++.
T Consensus 138 a~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~ 193 (599)
T 1w6s_A 138 AETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGE 193 (599)
T ss_dssp TTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCC
T ss_pred CCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCc
Confidence 999998877653221 222110111554444332 37899999998774
No 255
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.84 E-value=0.034 Score=38.45 Aligned_cols=72 Identities=15% Similarity=0.233 Sum_probs=48.4
Q ss_pred eEEEEECCCCCEEEEEe-CCCcEEEEEcCCCceeEEeCCCCC-ceeEEEEccCCCeEEEee-cC-----CeEEEEeCCCC
Q psy14458 51 VSALCVDPSGRLMVSGH-EDSSCVLYDIRGSRPLQTFKPHTA-DVRSIRFSPSAYYLLTGG-YD-----NKLVLTDLQGT 122 (125)
Q Consensus 51 i~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~-~d-----~~i~~~~~~~~ 122 (125)
..++++..++.+++.|+ .+..+++||..+.+....-..... .-.++...+++++++.|+ .+ ..+.+||..+.
T Consensus 245 ~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp SCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred cccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCC
Confidence 34567778898888887 456799999987654332221222 223456667999999988 34 56889998764
No 256
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.78 E-value=0.035 Score=33.63 Aligned_cols=73 Identities=5% Similarity=-0.034 Sum_probs=46.6
Q ss_pred CCeEEEEECCCCCEEEEEeC---CCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCC-eEEEeecCCeEEEEeCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHE---DSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAY-YLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~---~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~d~~i~~~~~~~ 121 (125)
.....++++|++..+..+.. .+.|..++.............-.....++++|++. ++++-...+.|..+++.+
T Consensus 122 ~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g 198 (267)
T 1npe_A 122 VNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ 198 (267)
T ss_dssp SSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTE
T ss_pred CCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCC
Confidence 45689999997655554443 36788888653322111222234567899999765 445556678899998864
No 257
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.70 E-value=0.0059 Score=41.73 Aligned_cols=81 Identities=20% Similarity=0.251 Sum_probs=52.5
Q ss_pred CCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEE
Q psy14458 6 EDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQT 85 (125)
Q Consensus 6 ~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~ 85 (125)
.++.|.-||+.+++.+....... ....-.+...+.+++.++.|+.++.+|.++++.+..
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~~---------------------~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~ 522 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEHL---------------------PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWK 522 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEESS---------------------CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CcceEEEEECCCCCEEEEecCCC---------------------CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEE
Confidence 36788889998888776654321 000001111366788899999999999999999998
Q ss_pred eCCCCCce-eEEEEccCCCeEEE
Q psy14458 86 FKPHTADV-RSIRFSPSAYYLLT 107 (125)
Q Consensus 86 ~~~~~~~v-~~~~~~~~~~~~~~ 107 (125)
++...... .-+.|..+|+.+++
T Consensus 523 ~~~~~g~~a~P~~y~~~G~qYv~ 545 (582)
T 1flg_A 523 FQTGSGIVSPPITWEQDGEQYLG 545 (582)
T ss_dssp EECSSCCCSCCEEEEETTEEEEE
T ss_pred ecCCCCcccCceEEEECCEEEEE
Confidence 87433221 12666678864433
No 258
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.68 E-value=0.044 Score=37.71 Aligned_cols=90 Identities=4% Similarity=-0.014 Sum_probs=63.5
Q ss_pred eecCCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEE-C-CCCCEEEEEe-------------
Q psy14458 3 SGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCV-D-PSGRLMVSGH------------- 67 (125)
Q Consensus 3 t~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~-~-~~~~~~~~~~------------- 67 (125)
+...+.+|.+.|+.+.++...+.-.. +.....+++ + |++.+++.++
T Consensus 107 nd~~~~rVavIdl~t~~~~~ii~ip~-------------------g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l 167 (595)
T 1fwx_A 107 NDKANTRVARVRCDVMKCDAILEIPN-------------------AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNM 167 (595)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECSS-------------------CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSST
T ss_pred EcCCCCEEEEEECCCceEeeEEeCCC-------------------CCCCcceeeeecCCCcEEEEecccccccCCCCccc
Confidence 44456678888888887766443221 145678887 4 8888888774
Q ss_pred -----CCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCC
Q psy14458 68 -----EDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDN 112 (125)
Q Consensus 68 -----~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~ 112 (125)
.++.+.+.|..+.+....+.--. ....+.++|+|+++++.+.+.
T Consensus 168 ~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~s 216 (595)
T 1fwx_A 168 EDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNS 216 (595)
T ss_dssp TCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCT
T ss_pred ccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCc
Confidence 34578999999988877776322 345688999999999988653
No 259
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.62 E-value=0.053 Score=33.66 Aligned_cols=72 Identities=18% Similarity=0.191 Sum_probs=49.8
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecC--CeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYD--NKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d--~~i~~~~~~~~ 122 (125)
.....+++++++.++++-..++.|..+|.... ....+. .......+++.++++++++.... ..+..++..++
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g 105 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDG 105 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTS
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCC
Confidence 46789999999987777768889999987653 332232 23467889999999877665442 24666665443
No 260
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.60 E-value=0.0097 Score=40.57 Aligned_cols=81 Identities=14% Similarity=0.061 Sum_probs=52.4
Q ss_pred CCCeEEEEECCCCcceeeecCCCCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEE
Q psy14458 6 EDSSCVLYDIRGSRPLQTFKPHTADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQT 85 (125)
Q Consensus 6 ~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~ 85 (125)
.++.|..||+.+++.+..+.... .+....+...+..++.++.++.++.+|.++++.+..
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~~---------------------~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~ 500 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEKF---------------------AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWN 500 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEESS---------------------CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCCeEEEEECCCCCEEEEecCCC---------------------CccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEE
Confidence 45788999998888777665321 111111122456777789999999999999999988
Q ss_pred eCCCCCc-eeEEEEccCCCeEEE
Q psy14458 86 FKPHTAD-VRSIRFSPSAYYLLT 107 (125)
Q Consensus 86 ~~~~~~~-v~~~~~~~~~~~~~~ 107 (125)
+...... -.-+.+.++|+.++.
T Consensus 501 ~~~~~~~~~~p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 501 FKMPSGGIGSPMTYSFKGKQYIG 523 (571)
T ss_dssp EECSSCCCSCCEEEEETTEEEEE
T ss_pred EeCCCCcEeeeEEEEECCEEEEE
Confidence 8743221 122445567765544
No 261
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.59 E-value=0.057 Score=33.68 Aligned_cols=71 Identities=15% Similarity=0.163 Sum_probs=48.1
Q ss_pred CeEEEEECC-CCCEEEEEeC-----------------CCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeE-EEeec
Q psy14458 50 PVSALCVDP-SGRLMVSGHE-----------------DSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYL-LTGGY 110 (125)
Q Consensus 50 ~i~~~~~~~-~~~~~~~~~~-----------------~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~ 110 (125)
....+++.+ ++.+.++-.. ++.|..+|..+++...... .-...+.++++|+++.+ ++-+.
T Consensus 127 ~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~ 205 (322)
T 2fp8_A 127 WLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEFL 205 (322)
T ss_dssp CEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEGG
T ss_pred ccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEecc-CCccCcceEECCCCCEEEEEeCC
Confidence 467899999 8887766432 3678888877665332221 11234579999999855 45466
Q ss_pred CCeEEEEeCCC
Q psy14458 111 DNKLVLTDLQG 121 (125)
Q Consensus 111 d~~i~~~~~~~ 121 (125)
++.|..+++.+
T Consensus 206 ~~~I~~~~~~~ 216 (322)
T 2fp8_A 206 SHQIVKYWLEG 216 (322)
T ss_dssp GTEEEEEESSS
T ss_pred CCeEEEEECCC
Confidence 78899999874
No 262
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.38 E-value=0.017 Score=40.64 Aligned_cols=71 Identities=14% Similarity=0.116 Sum_probs=48.3
Q ss_pred CeEEEEEC-CCCCEEEEEeC-CC----cEEEEEcCCC-ceeEEeCCCCCceeEEEEccCCCeEEEeecC-----CeEEEE
Q psy14458 50 PVSALCVD-PSGRLMVSGHE-DS----SCVLYDIRGS-RPLQTFKPHTADVRSIRFSPSAYYLLTGGYD-----NKLVLT 117 (125)
Q Consensus 50 ~i~~~~~~-~~~~~~~~~~~-~~----~i~~~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d-----~~i~~~ 117 (125)
.+...+|| |++++++.+.. +| .|+++|+.++ +.+.. .-......+.|+||++.|+....| ..|..+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~--~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD--KVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC--CEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc--cccCceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 57789999 99998765432 33 4999999988 63211 001123468999999888777664 357888
Q ss_pred eCCCC
Q psy14458 118 DLQGT 122 (125)
Q Consensus 118 ~~~~~ 122 (125)
++.++
T Consensus 253 ~lgt~ 257 (751)
T 2xe4_A 253 VMGKL 257 (751)
T ss_dssp ETTSC
T ss_pred ECCCC
Confidence 87664
No 263
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.36 E-value=0.076 Score=34.91 Aligned_cols=71 Identities=15% Similarity=0.227 Sum_probs=49.4
Q ss_pred CeEEEEECC-CCCEEEEEeCCCcEEEEEcCCCceeEEeC-CCCCceeEEEEccCCC-eEEEeecCCeEEEEeCC
Q psy14458 50 PVSALCVDP-SGRLMVSGHEDSSCVLYDIRGSRPLQTFK-PHTADVRSIRFSPSAY-YLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 50 ~i~~~~~~~-~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~~~~~~~d~~i~~~~~~ 120 (125)
....++++| ++.++++-..++.|..++...+....... ........++|+|+++ ++++-.....|..++..
T Consensus 227 ~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 227 NCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 456788999 66766666677889999987665422222 1224467899999998 55555677889888765
No 264
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.29 E-value=0.093 Score=32.73 Aligned_cols=70 Identities=11% Similarity=0.108 Sum_probs=44.7
Q ss_pred CeEEEEECCCCCEEEEE-eCCCcEEEEEcCCCc--eeEEeCCCCCceeEEEEccCCCeEEEeec----------CCeEEE
Q psy14458 50 PVSALCVDPSGRLMVSG-HEDSSCVLYDIRGSR--PLQTFKPHTADVRSIRFSPSAYYLLTGGY----------DNKLVL 116 (125)
Q Consensus 50 ~i~~~~~~~~~~~~~~~-~~~~~i~~~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----------d~~i~~ 116 (125)
....++++|+++.+..+ ...+.|.++++.... ....+....+ ...+++.++|.++++... .+.|..
T Consensus 186 ~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~ 264 (322)
T 2fp8_A 186 VPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIK 264 (322)
T ss_dssp CCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEE
T ss_pred cCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEE
Confidence 45678999999865554 556889999987421 1111111223 667899999987777654 355666
Q ss_pred EeCC
Q psy14458 117 TDLQ 120 (125)
Q Consensus 117 ~~~~ 120 (125)
+|..
T Consensus 265 ~d~~ 268 (322)
T 2fp8_A 265 FDEF 268 (322)
T ss_dssp ECTT
T ss_pred ECCC
Confidence 6653
No 265
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.24 E-value=0.13 Score=34.10 Aligned_cols=69 Identities=19% Similarity=0.346 Sum_probs=51.1
Q ss_pred CCCeEEEEECCC---CCEEEEEeCCCcEEEEEcCCC--ceeEEeC---------CCCCceeEEEEccCCCeEEEee--cC
Q psy14458 48 GSPVSALCVDPS---GRLMVSGHEDSSCVLYDIRGS--RPLQTFK---------PHTADVRSIRFSPSAYYLLTGG--YD 111 (125)
Q Consensus 48 ~~~i~~~~~~~~---~~~~~~~~~~~~i~~~d~~~~--~~~~~~~---------~~~~~v~~~~~~~~~~~~~~~~--~d 111 (125)
..+|..+.|+|- +..+++-..|+.|++||+... ++. .+. .....|.+++|.+++-.|...+ .+
T Consensus 124 ~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~ 202 (452)
T 3pbp_A 124 KSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEG 202 (452)
T ss_dssp CCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTS
T ss_pred CCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCC
Confidence 467999999995 568999999999999999862 122 222 2335688999999887776644 77
Q ss_pred CeEEEE
Q psy14458 112 NKLVLT 117 (125)
Q Consensus 112 ~~i~~~ 117 (125)
|.|+..
T Consensus 203 GDIYAl 208 (452)
T 3pbp_A 203 GDIFAF 208 (452)
T ss_dssp CEEEEE
T ss_pred CCEEEE
Confidence 777654
No 266
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.16 E-value=0.14 Score=33.63 Aligned_cols=72 Identities=10% Similarity=0.136 Sum_probs=45.0
Q ss_pred CCeEEEEECCCCCEEEEEeC-CC----cEEEEEcCCCcee--EEeCCCCCceeEEEEcc-CCCeEEEeecCCeEEEEeCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHE-DS----SCVLYDIRGSRPL--QTFKPHTADVRSIRFSP-SAYYLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~-~~----~i~~~d~~~~~~~--~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~i~~~~~~ 120 (125)
.....++++++++.++.+.. ++ .+...+. .+... ..+. .......++++| ++.++++-..++.|..++..
T Consensus 179 ~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~ 256 (430)
T 3tc9_A 179 SKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFT 256 (430)
T ss_dssp SCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETT
T ss_pred CCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECC
Confidence 56789999999986655553 22 2333443 22211 2222 123356788999 77777777778889999886
Q ss_pred CC
Q psy14458 121 GT 122 (125)
Q Consensus 121 ~~ 122 (125)
++
T Consensus 257 ~~ 258 (430)
T 3tc9_A 257 TQ 258 (430)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 267
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.12 E-value=0.13 Score=32.78 Aligned_cols=73 Identities=10% Similarity=0.099 Sum_probs=46.6
Q ss_pred CCeEEEEECCCCCEEEEEe-CC-CcEEEEEcCCCceeEEe-CCCCCceeEEEEccCC-CeEEEeecCCeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGH-ED-SSCVLYDIRGSRPLQTF-KPHTADVRSIRFSPSA-YYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~-~~-~~i~~~d~~~~~~~~~~-~~~~~~v~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~ 122 (125)
.....++++|.+..++... .. +.|+..+..... ...+ ...-...+.++++|++ .++++-+..+.|..+++...
T Consensus 159 ~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 159 EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp SCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC-cEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 4568999998665554443 44 678888765432 2223 2223456789999854 55555566788999988654
No 268
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.02 E-value=0.15 Score=32.62 Aligned_cols=71 Identities=20% Similarity=0.207 Sum_probs=51.2
Q ss_pred CeEEEEECCCCCEEEEEeCC-CcEEEEEcCCCceeEEe--C----CCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 50 PVSALCVDPSGRLMVSGHED-SSCVLYDIRGSRPLQTF--K----PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 50 ~i~~~~~~~~~~~~~~~~~~-~~i~~~d~~~~~~~~~~--~----~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
....++..++|+..++++.. +.|...+.... .+..+ . ......+.|.++|++..|+....++.+..+|+..
T Consensus 138 ~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 138 GVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred CCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 47899999999999988877 87777765433 22222 1 1122356899999998777766699999999763
No 269
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.87 E-value=0.083 Score=37.03 Aligned_cols=73 Identities=14% Similarity=0.063 Sum_probs=43.9
Q ss_pred CCeEEEEECCCCCEEEEEeC--CCcEEEEEcCCCceeEEeCCCCCceeEEEEccCC-CeEEEeecCCeEEEEeCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHE--DSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSA-YYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~--~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~d~~i~~~~~~~ 121 (125)
.....++++|.+..|+.+.. .+.|+..++............-...+.|+++|++ .++++-+..+.|..+++.+
T Consensus 496 ~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 496 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp CCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred CCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 34567888886554444332 2677777654332222222222345679999864 5556666778899998864
No 270
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=95.86 E-value=0.18 Score=32.17 Aligned_cols=74 Identities=15% Similarity=0.170 Sum_probs=47.9
Q ss_pred CCeEEEEECCCC-CEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccC-CCeEEEeecC-CeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSG-RLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPS-AYYLLTGGYD-NKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~-~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d-~~i~~~~~~~~ 122 (125)
.....+++++.+ .++++-...+.|.+.+.........+...-.....++++|. +.++++-..+ +.|...++...
T Consensus 116 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~ 192 (349)
T 3v64_C 116 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS 192 (349)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC
Confidence 345688888754 44455556678999987654433333333355678999984 5555665555 78888887653
No 271
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.79 E-value=0.2 Score=32.35 Aligned_cols=74 Identities=9% Similarity=0.059 Sum_probs=47.6
Q ss_pred CCeEEEEECCCCCEEEEEe-CC-CcEEEEEcCCCceeEEeCCCCCceeEEEEccC-CCeEEEeecCCeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGH-ED-SSCVLYDIRGSRPLQTFKPHTADVRSIRFSPS-AYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~-~~-~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~ 122 (125)
.....++++|.+..++... .. +.|+..+.............-...+.++++|+ +.++++-+..+.|..+++...
T Consensus 202 ~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (386)
T 3v65_B 202 EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 278 (386)
T ss_dssp SCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC
T ss_pred CCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 4568899998766555444 33 67888886543333223323345678999985 455566667788999988653
No 272
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.70 E-value=0.22 Score=32.16 Aligned_cols=94 Identities=12% Similarity=0.064 Sum_probs=56.4
Q ss_pred CCeEEEEecCcccccccCCCCCeEEEEECCCCCEEE-EEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEcc-CCCeEE
Q psy14458 29 ADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMV-SGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSP-SAYYLL 106 (125)
Q Consensus 29 ~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~ 106 (125)
..|+.+...+...............++|++....|+ +-...+.|+.++.........+.........+++.+ .+.+++
T Consensus 96 ~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~ 175 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYW 175 (386)
T ss_dssp SCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEE
T ss_pred ccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEE
Confidence 344444444433333333335678999997655554 444667899998876543333332233456788887 455666
Q ss_pred EeecCCeEEEEeCCCC
Q psy14458 107 TGGYDNKLVLTDLQGT 122 (125)
Q Consensus 107 ~~~~d~~i~~~~~~~~ 122 (125)
+-...+.|.+.++.+.
T Consensus 176 ~d~~~~~I~~~~~dg~ 191 (386)
T 3v65_B 176 TDSGTSRIEVANLDGA 191 (386)
T ss_dssp EETTTTEEEECBTTSC
T ss_pred EcCCCCeEEEEeCCCC
Confidence 6666778888887654
No 273
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.58 E-value=0.22 Score=31.21 Aligned_cols=73 Identities=14% Similarity=0.083 Sum_probs=46.6
Q ss_pred CCeEEEEECCCCCEEEEEeCC--CcEEEEEcCCCceeEEe-CCCCCceeEEEEccCCC-eEEEeecCCeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHED--SSCVLYDIRGSRPLQTF-KPHTADVRSIRFSPSAY-YLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~--~~i~~~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~-~~~~~~~d~~i~~~~~~~~ 122 (125)
.....++++|.+..++.+... +.|...+... .....+ ...-...+.++++|++. ++++-+..+.|..+|+.+.
T Consensus 120 ~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~ 196 (316)
T 1ijq_A 120 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 196 (316)
T ss_dssp CCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC
Confidence 467899999866655444432 6788887643 322222 22234567899998654 4555556788999998653
No 274
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.46 E-value=0.42 Score=33.78 Aligned_cols=71 Identities=14% Similarity=0.069 Sum_probs=48.5
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeC----CCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFK----PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
..|.+++..+++..+-.|+.++-|..+|..+++...... .....|.++...+++.+.+... + -+..+|..+
T Consensus 406 ~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~-Gl~~~~~~~ 480 (795)
T 4a2l_A 406 NNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-S-ALVRFNPEQ 480 (795)
T ss_dssp SCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-S-CEEEEETTT
T ss_pred ccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-C-ceeEEeCCC
Confidence 568899988888845556676779999988765433221 1245688898888887665543 4 477787654
No 275
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.46 E-value=0.29 Score=31.85 Aligned_cols=74 Identities=15% Similarity=0.076 Sum_probs=47.9
Q ss_pred CCeEEEEECCCCCEEEEEe--CCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeE-EEeecCCeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGH--EDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYL-LTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~d~~i~~~~~~~~ 122 (125)
.....++++|.+..++... ..+.|+..+.............-...+.++++|++..| ++=+....|..+|+...
T Consensus 202 ~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 202 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 278 (400)
T ss_dssp CCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC
Confidence 4578999999766555554 24678888875433333233233567789999865544 55456788999888654
No 276
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=95.37 E-value=0.27 Score=30.97 Aligned_cols=74 Identities=16% Similarity=0.133 Sum_probs=47.2
Q ss_pred CCeEEEEECCCCCEEEEEe--CCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCC-CeEEEeecCCeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGH--EDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSA-YYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~ 122 (125)
.....++++|.+..++... ..+.|+..+.............-...+.++++|++ .++++=+..+.|..+|+...
T Consensus 122 ~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~ 198 (318)
T 3sov_A 122 DQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT 198 (318)
T ss_dssp SSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCC
Confidence 4568899998765555554 35778888765332222222223446789999854 45555567788999988643
No 277
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=95.32 E-value=0.25 Score=30.29 Aligned_cols=72 Identities=10% Similarity=0.155 Sum_probs=45.8
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCce---eEEeC------CCCCceeEEEEccCCCeEEEeecCCeEEEEeC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRP---LQTFK------PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDL 119 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~---~~~~~------~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~ 119 (125)
.....+++.+++.++++.-.++.+.++++..... +.... ..+...-.++|+|++..+..+.+.....+|.+
T Consensus 70 ~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~ 149 (255)
T 3qqz_A 70 KDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKV 149 (255)
T ss_dssp SSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEE
T ss_pred CChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEE
Confidence 4567888888887666655667888888755331 12221 23445678999998876766666555455544
Q ss_pred C
Q psy14458 120 Q 120 (125)
Q Consensus 120 ~ 120 (125)
+
T Consensus 150 ~ 150 (255)
T 3qqz_A 150 N 150 (255)
T ss_dssp E
T ss_pred c
Confidence 3
No 278
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.09 E-value=0.33 Score=30.39 Aligned_cols=74 Identities=11% Similarity=0.020 Sum_probs=45.6
Q ss_pred CCeEEEEECCCCCEE-EEEeCCCcEEEEEcCC----CceeEEeCCCCCceeEEEEcc-CCCeEEEeecCCeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLM-VSGHEDSSCVLYDIRG----SRPLQTFKPHTADVRSIRFSP-SAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~-~~~~~~~~i~~~d~~~----~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
.....++|++.+..+ .+-...+.|..++... ......+...-.....+++++ ++.++++-...+.|.+.++.+.
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence 467789999866544 4444568899998765 222222322223457888887 4555566667788888887653
No 279
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=95.08 E-value=0.42 Score=31.52 Aligned_cols=73 Identities=8% Similarity=0.080 Sum_probs=41.3
Q ss_pred CCeEEEEECCCCCEEEEEeCC---C-cEEEEEcCCCce-eEEeCCCCCceeEEEEcc-CCCeEEEeecCCeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHED---S-SCVLYDIRGSRP-LQTFKPHTADVRSIRFSP-SAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~---~-~i~~~d~~~~~~-~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
.....++++++++++++-... . .+...+...+.. ...+. .-.....++++| ++.++++-..++.|+.++..++
T Consensus 182 ~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g 260 (433)
T 4hw6_A 182 GQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATG 260 (433)
T ss_dssp SCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTC
T ss_pred CCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCC
Confidence 568899999999944443311 1 123233221111 01111 123345688888 6777767667788888887643
No 280
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.05 E-value=0.047 Score=32.99 Aligned_cols=67 Identities=15% Similarity=0.123 Sum_probs=43.5
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCce------eEEeC-CCCCceeEEEEccCCCeEEEeecCCeEEEEeC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRP------LQTFK-PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDL 119 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~------~~~~~-~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~ 119 (125)
..+..++|+|++.+.+. .+|.++-.+..+.+. ...+- .--..-.++.|.|+|.+.++ .||.|+-++-
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCC
Confidence 46779999999887666 677777666544211 11110 00111368999999988888 6688877764
No 281
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=94.98 E-value=0.65 Score=33.24 Aligned_cols=74 Identities=14% Similarity=0.057 Sum_probs=47.5
Q ss_pred CCeEEEEECCCCCEEEEEeC--CCcEEEEEcCCCceeEEeCCCCCceeEEEEccCC-CeEEEeecCCeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHE--DSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSA-YYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~--~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~ 122 (125)
.....|+++|....|+.... .+.|...++........+...-.....|++++.+ +++++=.....|...++.+.
T Consensus 514 ~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 514 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 590 (791)
T ss_dssp CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCC
Confidence 45789999997655555542 3678888875444333333333567889999754 44455456678888888654
No 282
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.97 E-value=0.042 Score=35.15 Aligned_cols=106 Identities=8% Similarity=0.098 Sum_probs=61.8
Q ss_pred CeeecCCCeEEEEECCCCcceeeecCC-CCCeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEE-eCCCcEEEEEcC
Q psy14458 1 MVSGHEDSSCVLYDIRGSRPLQTFKPH-TADVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSG-HEDSSCVLYDIR 78 (125)
Q Consensus 1 l~t~~~d~~i~v~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~i~~~d~~ 78 (125)
++.++.||.|.-+|..+|+....+... ..+..... . ... ..++..++.. +.||.|+.++..
T Consensus 13 V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~-----------~-~~~-----~~~~~~~vv~p~~dG~l~a~~~~ 75 (339)
T 2be1_A 13 LIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQ-----------E-PSR-----LETYETLIIEPFGDGNIYYFNAH 75 (339)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECC-----------C-SCT-----TTSSEEEEECCSTTTEEEEEETT
T ss_pred EEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEec-----------C-Ccc-----ccCCcEEEEEECCCCEEEEEECC
Confidence 367899999999999999998887643 11111000 0 000 0122333333 589999999988
Q ss_pred CCceeEEeCC----CCCceeE---EEE-c----cCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 79 GSRPLQTFKP----HTADVRS---IRF-S----PSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 79 ~~~~~~~~~~----~~~~v~~---~~~-~----~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
++.....+.. ...++.. ... . ..+..+++|+.++.+...|++++.
T Consensus 76 ~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~ 132 (339)
T 2be1_A 76 QGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGE 132 (339)
T ss_dssp TEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCC
T ss_pred CCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCc
Confidence 7754443331 1111110 000 0 045578889999999999988774
No 283
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=94.95 E-value=0.1 Score=36.07 Aligned_cols=70 Identities=20% Similarity=0.223 Sum_probs=47.0
Q ss_pred EEEECC-CCCEEEEEeCCC-----------cEEEEEcCCCce--eEEeC-CCCCceeEEEEccCCCeEEEeec-CCeEEE
Q psy14458 53 ALCVDP-SGRLMVSGHEDS-----------SCVLYDIRGSRP--LQTFK-PHTADVRSIRFSPSAYYLLTGGY-DNKLVL 116 (125)
Q Consensus 53 ~~~~~~-~~~~~~~~~~~~-----------~i~~~d~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~~~~~~~-d~~i~~ 116 (125)
..++.+ +++.++.|+.+. .+.+||..+++. +..+. .+.....++++.+++++++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 556666 777888776432 578899887642 22332 23334445777889999999884 567999
Q ss_pred EeCCCC
Q psy14458 117 TDLQGT 122 (125)
Q Consensus 117 ~~~~~~ 122 (125)
||..+.
T Consensus 270 yd~~t~ 275 (656)
T 1k3i_A 270 YDSSSD 275 (656)
T ss_dssp EEGGGT
T ss_pred ecCcCC
Confidence 997653
No 284
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=94.79 E-value=0.31 Score=32.12 Aligned_cols=71 Identities=11% Similarity=0.096 Sum_probs=47.4
Q ss_pred CeEEEEECC-CCCEEEEEeCCCcEEEEEcCCCceeEEe-C-CCCCceeEEEEccCCC-eEEEeecCCeEEEEeCC
Q psy14458 50 PVSALCVDP-SGRLMVSGHEDSSCVLYDIRGSRPLQTF-K-PHTADVRSIRFSPSAY-YLLTGGYDNKLVLTDLQ 120 (125)
Q Consensus 50 ~i~~~~~~~-~~~~~~~~~~~~~i~~~d~~~~~~~~~~-~-~~~~~v~~~~~~~~~~-~~~~~~~d~~i~~~~~~ 120 (125)
....++++| ++.++++-..++.|+.+|..++.....+ . .....-..++++|+++ ++++-.....|..+++.
T Consensus 229 ~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 229 GAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp SBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred CCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 345688888 6666666667788999998766542222 2 1122234699999998 55666677889998765
No 285
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=94.71 E-value=0.49 Score=30.53 Aligned_cols=73 Identities=16% Similarity=0.280 Sum_probs=50.3
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcC-----CCceeEEeC-CC-CCceeEEEE--ccCCC-eEEEee-cCCeEEEE
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIR-----GSRPLQTFK-PH-TADVRSIRF--SPSAY-YLLTGG-YDNKLVLT 117 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~-----~~~~~~~~~-~~-~~~v~~~~~--~~~~~-~~~~~~-~d~~i~~~ 117 (125)
..+..+...+....|+.+-++.-|..++.. +++.+..+. .+ ...+..+.+ .++++ ++++.+ .+.++.+|
T Consensus 180 sq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vy 259 (355)
T 3amr_A 180 SQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIY 259 (355)
T ss_dssp SCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEE
T ss_pred CCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEE
Confidence 578888999988899999988777777754 234454442 22 235777776 45555 455444 78899999
Q ss_pred eCCC
Q psy14458 118 DLQG 121 (125)
Q Consensus 118 ~~~~ 121 (125)
|.+.
T Consensus 260 dr~~ 263 (355)
T 3amr_A 260 DRQG 263 (355)
T ss_dssp ESST
T ss_pred ECCC
Confidence 9863
No 286
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=94.61 E-value=0.79 Score=32.44 Aligned_cols=69 Identities=16% Similarity=0.152 Sum_probs=45.5
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeC------CCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFK------PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
..|.++...+++.+.+... +-+..||..+++...... .....|.++...++|.+.+... + -+..+|..+
T Consensus 452 ~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~-Gl~~~~~~~ 526 (795)
T 4a2l_A 452 ENVYAILPDGEGNLWLGTL--SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-E-GLSVFKQEG 526 (795)
T ss_dssp SCEEEEEECSSSCEEEEES--SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-S-CEEEEEEET
T ss_pred CeeEEEEECCCCCEEEEec--CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-C-ceEEEeCCC
Confidence 5788999988888666554 458889987664332111 1235688898888887666554 4 477776543
No 287
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=94.56 E-value=0.43 Score=29.24 Aligned_cols=72 Identities=13% Similarity=0.218 Sum_probs=52.0
Q ss_pred CCeEEEEECCCCC-EEEEEeCCCcEEEEEcCCCceeEEeCCC-CCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 49 SPVSALCVDPSGR-LMVSGHEDSSCVLYDIRGSRPLQTFKPH-TADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 49 ~~i~~~~~~~~~~-~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
..+..++++|++. +++....++.|...|.. ++.+..+... ....-.+++.+++.++++.-.++.+.++++..
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~ 100 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTP 100 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECT
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 5689999999765 55567788889999987 7776666421 23456788888887766655667788887654
No 288
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=94.42 E-value=0.61 Score=34.05 Aligned_cols=39 Identities=10% Similarity=0.120 Sum_probs=33.2
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFK 87 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 87 (125)
..+.+++..++..++++-+.|+.+|+|++.+++++.+..
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 456777888888999999999999999999998877653
No 289
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=94.41 E-value=0.61 Score=30.33 Aligned_cols=93 Identities=11% Similarity=0.034 Sum_probs=54.3
Q ss_pred CeEEEEecCcccccccCCCCCeEEEEECCCCCEEEEE-eCCCcEEEEEcCCC----ceeEEeCCCCCceeEEEEcc-CCC
Q psy14458 30 DVRSIHLDHYTTEAGTRQGSPVSALCVDPSGRLMVSG-HEDSSCVLYDIRGS----RPLQTFKPHTADVRSIRFSP-SAY 103 (125)
Q Consensus 30 ~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~i~~~d~~~~----~~~~~~~~~~~~v~~~~~~~-~~~ 103 (125)
.|+.+...+............+..++|++....|+-. ...+.|+.+++... .....+.........+++.+ .+.
T Consensus 93 ~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~ 172 (400)
T 3p5b_L 93 EVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSN 172 (400)
T ss_dssp EEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTE
T ss_pred eeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCc
Confidence 3444443333322223333677899999866555554 45677888887642 22222332334567788887 556
Q ss_pred eEEEeecCCeEEEEeCCCC
Q psy14458 104 YLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 104 ~~~~~~~d~~i~~~~~~~~ 122 (125)
++++-...+.|.+.++.+.
T Consensus 173 lY~~d~~~~~I~~~~~~g~ 191 (400)
T 3p5b_L 173 IYWTDSVLGTVSVADTKGV 191 (400)
T ss_dssp EEEEETTTTEEEEECTTTC
T ss_pred eEEEECCCCeEEEEeCCCC
Confidence 6666667788888887654
No 290
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=94.40 E-value=0.59 Score=30.13 Aligned_cols=70 Identities=11% Similarity=0.135 Sum_probs=45.2
Q ss_pred CCeEEEEECCCCCEEEEEe-----------------CCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEE-eec
Q psy14458 49 SPVSALCVDPSGRLMVSGH-----------------EDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLT-GGY 110 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~-----------------~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~ 110 (125)
...+.+++.+++.+.++.. ..|.|+.+|. ++ +..+...-..-+.++|+||++.+.. -+.
T Consensus 165 ~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~-~~~~~~~l~~pNGia~spDg~~lYvadt~ 241 (355)
T 3sre_A 165 PSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--ND-VRVVAEGFDFANGINISPDGKYVYIAELL 241 (355)
T ss_dssp SSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TC-CEEEEEEESSEEEEEECTTSSEEEEEEGG
T ss_pred CCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--Ce-EEEeecCCcccCcceECCCCCEEEEEeCC
Confidence 4578899999998777754 1245555554 22 2222112234578999999976655 456
Q ss_pred CCeEEEEeCCC
Q psy14458 111 DNKLVLTDLQG 121 (125)
Q Consensus 111 d~~i~~~~~~~ 121 (125)
.+.|..|++..
T Consensus 242 ~~~I~~~~~~~ 252 (355)
T 3sre_A 242 AHKIHVYEKHA 252 (355)
T ss_dssp GTEEEEEEECT
T ss_pred CCeEEEEEECC
Confidence 88999999863
No 291
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=93.89 E-value=1.2 Score=31.55 Aligned_cols=71 Identities=10% Similarity=0.114 Sum_probs=46.0
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCC-----CCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 48 GSPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPH-----TADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 48 ~~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
...|.++...+++.+.+.. . +-|..+|..+++........ ...|.++...++|.+.+....+| +..+|.++
T Consensus 449 ~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~ 524 (781)
T 3v9f_A 449 LLDVRVFYEDKNKKIWIGT-H-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDM 524 (781)
T ss_dssp CCCEEEEEECTTSEEEEEE-T-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTC
T ss_pred CCeEEEEEECCCCCEEEEE-C-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCC
Confidence 3578899888887755544 4 55888998776543322212 35688998888887665544344 66677654
No 292
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=93.85 E-value=0.6 Score=31.56 Aligned_cols=69 Identities=14% Similarity=0.230 Sum_probs=45.5
Q ss_pred eEEEEECCC-CCEEEEEeCCCcEEEEEcC-------CCce-----------eEE-eC-CCCCceeEEEEccCCCe-EEEe
Q psy14458 51 VSALCVDPS-GRLMVSGHEDSSCVLYDIR-------GSRP-----------LQT-FK-PHTADVRSIRFSPSAYY-LLTG 108 (125)
Q Consensus 51 i~~~~~~~~-~~~~~~~~~~~~i~~~d~~-------~~~~-----------~~~-~~-~~~~~v~~~~~~~~~~~-~~~~ 108 (125)
...++++|+ +.++++-..++.|+.+|+. ++.. ... +. ........++|+|+++. +++-
T Consensus 249 p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD 328 (496)
T 3kya_A 249 CNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGV 328 (496)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred ceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEe
Confidence 457788884 4556666677889999987 4432 111 21 22344578999999984 5555
Q ss_pred ecCCeEEEEeC
Q psy14458 109 GYDNKLVLTDL 119 (125)
Q Consensus 109 ~~d~~i~~~~~ 119 (125)
+....|+.++.
T Consensus 329 ~~~h~I~kid~ 339 (496)
T 3kya_A 329 INNHYFMRSDY 339 (496)
T ss_dssp TTTTEEEEEEE
T ss_pred CCCCEEEEEec
Confidence 66778888654
No 293
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=93.73 E-value=0.28 Score=34.47 Aligned_cols=72 Identities=18% Similarity=0.170 Sum_probs=42.0
Q ss_pred CeEEEEECCCC-CEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCC-eEEEeecC-CeEEEEeCCC
Q psy14458 50 PVSALCVDPSG-RLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAY-YLLTGGYD-NKLVLTDLQG 121 (125)
Q Consensus 50 ~i~~~~~~~~~-~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~d-~~i~~~~~~~ 121 (125)
....+++.+.+ .++++-...+.|.+.++........+.........++++|.+. ++++-... +.|...++..
T Consensus 454 ~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG 528 (699)
T 1n7d_A 454 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 528 (699)
T ss_dssp -CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS
T ss_pred CcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC
Confidence 35577887544 4445545667899998765443333332234457788988544 44443333 6777776654
No 294
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=93.69 E-value=1.4 Score=31.69 Aligned_cols=74 Identities=18% Similarity=0.210 Sum_probs=47.5
Q ss_pred CCeEEEEECCCCC-EEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccC-CCeEEEeecC-CeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGR-LMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPS-AYYLLTGGYD-NKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~-~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d-~~i~~~~~~~~ 122 (125)
.....|++.+.+. ++++-...+.|.+.++........+...-.....|+++|. +.++++-... ..|...++.+.
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~ 547 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 547 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC
Confidence 4567889987764 4455556788999998754433333333445788999986 4455554343 67888877653
No 295
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=92.91 E-value=1.1 Score=28.63 Aligned_cols=71 Identities=15% Similarity=0.128 Sum_probs=49.8
Q ss_pred CeEEEEE---CCCCCEEEEEe-------------CCCcEEEEEcC---CCceeEEeCC--C-----------CCceeEEE
Q psy14458 50 PVSALCV---DPSGRLMVSGH-------------EDSSCVLYDIR---GSRPLQTFKP--H-----------TADVRSIR 97 (125)
Q Consensus 50 ~i~~~~~---~~~~~~~~~~~-------------~~~~i~~~d~~---~~~~~~~~~~--~-----------~~~v~~~~ 97 (125)
....+.+ .|++.+++... .+..|..+|+. +++.+..... . ......+.
T Consensus 64 ~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDva 143 (334)
T 2p9w_A 64 QMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSA 143 (334)
T ss_dssp EEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEE
T ss_pred eeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeE
Confidence 4578999 68877776544 26779999998 7776654431 1 12477899
Q ss_pred EccCCCeEEEeecC-CeEEEEeCC
Q psy14458 98 FSPSAYYLLTGGYD-NKLVLTDLQ 120 (125)
Q Consensus 98 ~~~~~~~~~~~~~d-~~i~~~~~~ 120 (125)
..++|+..++++.. +.|...+..
T Consensus 144 vD~~GnaYVt~s~~~~~I~rV~pd 167 (334)
T 2p9w_A 144 QDRDGNSYVAFALGMPAIARVSAD 167 (334)
T ss_dssp ECTTSCEEEEEEESSCEEEEECTT
T ss_pred ECCCCCEEEeCCCCCCeEEEEeCC
Confidence 99999999988877 666655544
No 296
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=92.47 E-value=1.1 Score=31.19 Aligned_cols=72 Identities=10% Similarity=0.076 Sum_probs=52.5
Q ss_pred CCeEEEEECCCCCEEEEEe-CCCcEEEEEcCCCce-------------eEEeCCCCCceeEEEEccCCCeEEEeecCCeE
Q psy14458 49 SPVSALCVDPSGRLMVSGH-EDSSCVLYDIRGSRP-------------LQTFKPHTADVRSIRFSPSAYYLLTGGYDNKL 114 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~-------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i 114 (125)
.....+.++|+|++++.++ -+.++.++|+.+-.. ....+ -.-...+.+|.++|....+.--|..|
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqv 401 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQV 401 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceE
Confidence 5567889999999886654 667799999874211 22222 23456789999999777777789999
Q ss_pred EEEeCCC
Q psy14458 115 VLTDLQG 121 (125)
Q Consensus 115 ~~~~~~~ 121 (125)
.-|++..
T Consensus 402 vkWni~~ 408 (638)
T 3sbq_A 402 VKWNMEE 408 (638)
T ss_dssp EEEEHHH
T ss_pred EEEeccH
Confidence 9999753
No 297
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=92.08 E-value=2.3 Score=30.09 Aligned_cols=71 Identities=14% Similarity=0.201 Sum_probs=46.1
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCC----CCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKP----HTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
..+.++...+++.+.+....+| +..+|..+++.. .+.. ....|.++...++|.+.++.. +|.+..+|.+++
T Consensus 495 ~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~~-~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~ 569 (781)
T 3v9f_A 495 NFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLVR-KFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPSARNF 569 (781)
T ss_dssp SCEEEEEECTTCCEEEEESSSC-EEEECTTCCEEE-EECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESCTTTC
T ss_pred ceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeEE-EccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEECCCCC
Confidence 5788999998888666553344 777887665433 3321 235688888888887665544 565477776543
No 298
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=91.87 E-value=1.7 Score=28.13 Aligned_cols=71 Identities=10% Similarity=0.200 Sum_probs=50.3
Q ss_pred CCeEEEEE--CCC-CC-EEEEEeCCCcEEEEEcC-------CCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEE
Q psy14458 49 SPVSALCV--DPS-GR-LMVSGHEDSSCVLYDIR-------GSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLT 117 (125)
Q Consensus 49 ~~i~~~~~--~~~-~~-~~~~~~~~~~i~~~d~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~ 117 (125)
..+..+|+ +|. +. +++....+|.+..|++. +.+.+..|. ....+-.+...+....|..+-++.-|..+
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~ 206 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNSQTEGMAADDEYGRLYIAEEDEAIWKF 206 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCEEEEEEETTTTEEEEEETTTEEEEE
T ss_pred CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCCCcceEEEcCCCCeEEEecccceEEEE
Confidence 45667777 774 43 57777888999998883 235667776 34567778888877888888888666666
Q ss_pred eCC
Q psy14458 118 DLQ 120 (125)
Q Consensus 118 ~~~ 120 (125)
+.+
T Consensus 207 da~ 209 (355)
T 3amr_A 207 SAE 209 (355)
T ss_dssp ECS
T ss_pred eCC
Confidence 643
No 299
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=91.52 E-value=1.5 Score=26.86 Aligned_cols=64 Identities=20% Similarity=0.109 Sum_probs=36.0
Q ss_pred CCCEEEEEeCC-----CcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecC-----CeEEEEeCCCC
Q psy14458 59 SGRLMVSGHED-----SSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYD-----NKLVLTDLQGT 122 (125)
Q Consensus 59 ~~~~~~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d-----~~i~~~~~~~~ 122 (125)
++..++.|+.+ ..+.+||..+.+....-........+....-++++++.|+.+ ..+.+||+++.
T Consensus 206 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 206 NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 45566666543 568999998765433221111111111222277788888765 45788888764
No 300
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=91.33 E-value=2.4 Score=28.76 Aligned_cols=71 Identities=8% Similarity=0.091 Sum_probs=44.6
Q ss_pred CCeEEEEE-------CCCCCEEEEEeCCC-------cEEEEEcCC-Ccee-----EEeCCCCCceeEEEEcc-CCCeEEE
Q psy14458 49 SPVSALCV-------DPSGRLMVSGHEDS-------SCVLYDIRG-SRPL-----QTFKPHTADVRSIRFSP-SAYYLLT 107 (125)
Q Consensus 49 ~~i~~~~~-------~~~~~~~~~~~~~~-------~i~~~d~~~-~~~~-----~~~~~~~~~v~~~~~~~-~~~~~~~ 107 (125)
.....++| ++++..++.+...+ .+.+++... +... ..+.. -.....++.+| ++.++++
T Consensus 186 ~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvt 264 (496)
T 3kya_A 186 NRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFN 264 (496)
T ss_dssp SBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEE
T ss_pred CCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEE
Confidence 35789999 99998666665544 266665333 1211 12221 12345788899 5566666
Q ss_pred eecCCeEEEEeCC
Q psy14458 108 GGYDNKLVLTDLQ 120 (125)
Q Consensus 108 ~~~d~~i~~~~~~ 120 (125)
-..++.|..+|+.
T Consensus 265 d~~~g~V~r~d~~ 277 (496)
T 3kya_A 265 SYEKGQVFRLDLV 277 (496)
T ss_dssp ETTTTEEEEECHH
T ss_pred ECCCCEEEEEecc
Confidence 7778889999986
No 301
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=90.41 E-value=2.3 Score=27.08 Aligned_cols=69 Identities=14% Similarity=0.223 Sum_probs=43.7
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCc--eeEEeC---CCCCceeEEEEccC----CCeEEEeecC-----CeE
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSR--PLQTFK---PHTADVRSIRFSPS----AYYLLTGGYD-----NKL 114 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~~~~---~~~~~v~~~~~~~~----~~~~~~~~~d-----~~i 114 (125)
.....+++.|++.++++ ...+.|++++ .++ .+..+. ........++++|+ +.++++-..+ ..|
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 45679999999985555 5669999998 333 222222 12345788999998 4555554432 456
Q ss_pred EEEeCC
Q psy14458 115 VLTDLQ 120 (125)
Q Consensus 115 ~~~~~~ 120 (125)
..++..
T Consensus 108 ~r~~~~ 113 (352)
T 2ism_A 108 VRLRHL 113 (352)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 666654
No 302
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=90.03 E-value=2.2 Score=26.31 Aligned_cols=73 Identities=19% Similarity=0.255 Sum_probs=44.3
Q ss_pred CCeEEEEECCCCCEEEEEeCCC--cEEEEEcCCCceeEEeC-CCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDS--SCVLYDIRGSRPLQTFK-PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~--~i~~~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
.....+++.++++++++..... .|..+|..+++...... ........++..+++..+++-..++.|..+|..+
T Consensus 72 ~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~ 147 (306)
T 2p4o_A 72 GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQ 147 (306)
T ss_dssp SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTT
T ss_pred CCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCC
Confidence 4678999999998666554332 46677777665432222 1222234455555655566655688888888754
No 303
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=89.98 E-value=0.5 Score=35.15 Aligned_cols=38 Identities=11% Similarity=0.115 Sum_probs=31.2
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeC
Q psy14458 50 PVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFK 87 (125)
Q Consensus 50 ~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 87 (125)
.+.+++..++..++++-+.|+.+|+|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 44556667788999999999999999999998777644
No 304
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=89.85 E-value=2.8 Score=27.17 Aligned_cols=71 Identities=6% Similarity=-0.037 Sum_probs=52.0
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDL 119 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~ 119 (125)
+..-++..++....+..-+.-|.+++||+.++.++..-+-....|..-+.+.+..-++.....|.+.-..+
T Consensus 260 DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v 330 (365)
T 2xzh_A 260 DFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCV 330 (365)
T ss_dssp CCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEE
T ss_pred CceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEE
Confidence 44567788888888888999999999999999999877766666665555544445555557776655444
No 305
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=89.75 E-value=1.5 Score=28.07 Aligned_cols=62 Identities=10% Similarity=0.087 Sum_probs=41.1
Q ss_pred CEEEEEeCCCcEEEEEcCCCceeEEeCCC-CCceeEEEE--cc-CCCeEEEe-ecCCeEEEEeCCCC
Q psy14458 61 RLMVSGHEDSSCVLYDIRGSRPLQTFKPH-TADVRSIRF--SP-SAYYLLTG-GYDNKLVLTDLQGT 122 (125)
Q Consensus 61 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~v~~~~~--~~-~~~~~~~~-~~d~~i~~~~~~~~ 122 (125)
..++.++.||.|+-+|..+|+....++.. ..++....- .+ ++..++.. +.||.+..++..++
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G 77 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQG 77 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCC
Confidence 46788999999999999999998888743 122221110 01 33344444 57999998887665
No 306
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=88.82 E-value=3.2 Score=26.51 Aligned_cols=70 Identities=17% Similarity=0.312 Sum_probs=43.8
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCc-eeEEeC---CCCCceeEEEEccC----CCeEEEeec---C----Ce
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSR-PLQTFK---PHTADVRSIRFSPS----AYYLLTGGY---D----NK 113 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~-~~~~~~---~~~~~v~~~~~~~~----~~~~~~~~~---d----~~ 113 (125)
.....+++.|++.++++ ..++.|++++ .+++ .+..+. ........++++|+ +.++++-+. + ..
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 45689999999985555 5669999887 3444 222221 12345788999997 555555442 3 45
Q ss_pred EEEEeCC
Q psy14458 114 LVLTDLQ 120 (125)
Q Consensus 114 i~~~~~~ 120 (125)
|..++..
T Consensus 107 v~r~~~~ 113 (354)
T 3a9g_A 107 VIRGRLD 113 (354)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 6666554
No 307
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=88.77 E-value=4.5 Score=28.16 Aligned_cols=74 Identities=12% Similarity=0.001 Sum_probs=48.1
Q ss_pred CCeEEEEECCCCCEEEE-EeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccC-CCeEEEeecCCeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLMVS-GHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPS-AYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~-~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~ 122 (125)
.....++|++....++- -..++.|+.+++........+.........+++.+. ++++++-...+.|.+.++.+.
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~ 112 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQ 112 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTST
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCC
Confidence 45778999987655544 446688888887654333333322234667888874 455566666788888888654
No 308
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=88.43 E-value=4.6 Score=28.06 Aligned_cols=59 Identities=25% Similarity=0.340 Sum_probs=39.6
Q ss_pred CeEEEEECCCCCEEEEEeCC------------CcEEEEEcCCCceeEEeC-CCCCceeEEEEccCCCeEEEe
Q psy14458 50 PVSALCVDPSGRLMVSGHED------------SSCVLYDIRGSRPLQTFK-PHTADVRSIRFSPSAYYLLTG 108 (125)
Q Consensus 50 ~i~~~~~~~~~~~~~~~~~~------------~~i~~~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~ 108 (125)
..--|+|+|.+.+++.-+.+ +.+.+.+..+++...-+. ....+++.++|+||++.|...
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 34678999999977765532 234555555566544443 345689999999999877654
No 309
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=88.17 E-value=3.1 Score=25.53 Aligned_cols=64 Identities=17% Similarity=0.115 Sum_probs=34.7
Q ss_pred CCCEEEEEeCC------CcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeec---------CCeEEEEeCCCC
Q psy14458 59 SGRLMVSGHED------SSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGY---------DNKLVLTDLQGT 122 (125)
Q Consensus 59 ~~~~~~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---------d~~i~~~~~~~~ 122 (125)
++.+++.|+.+ ..+.+||..+.+....-........+.....++++++.|+. -..+..||+.+.
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~ 179 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATE 179 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTT
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCC
Confidence 45566666544 45889998876543321111111111112237777777764 244778887654
No 310
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=88.09 E-value=3.1 Score=25.50 Aligned_cols=64 Identities=11% Similarity=0.111 Sum_probs=36.0
Q ss_pred CCCEEEEEeCC----CcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecC------CeEEEEeCCCC
Q psy14458 59 SGRLMVSGHED----SSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYD------NKLVLTDLQGT 122 (125)
Q Consensus 59 ~~~~~~~~~~~----~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d------~~i~~~~~~~~ 122 (125)
++.+++.|+.+ ..+.+||..+.+....-........+....-++++++.|+.+ ..+.+||..+.
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~ 128 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTE 128 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTT
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCC
Confidence 45566666644 668889988765433222111111111122277788888765 45888887654
No 311
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=88.06 E-value=1.7 Score=30.95 Aligned_cols=37 Identities=14% Similarity=0.250 Sum_probs=29.4
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFK 87 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 87 (125)
..|.++.+ +..++++-+.|..+|+|++.+++++....
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 34665555 47799999999999999999998776654
No 312
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=87.52 E-value=1.1 Score=32.84 Aligned_cols=32 Identities=25% Similarity=0.240 Sum_probs=27.0
Q ss_pred ceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 92 DVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 92 ~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.+.++...++..++++-+.|+++++|++.++.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~ 268 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ 268 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCC
Confidence 45667777788899999999999999998763
No 313
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=87.16 E-value=4.2 Score=25.93 Aligned_cols=59 Identities=10% Similarity=0.111 Sum_probs=37.1
Q ss_pred CCeEEEEECCCCC-EEEEEeCCCcEEEEEcCCCce---eEEe----CCCCCceeEEEEccC----CCeEEEee
Q psy14458 49 SPVSALCVDPSGR-LMVSGHEDSSCVLYDIRGSRP---LQTF----KPHTADVRSIRFSPS----AYYLLTGG 109 (125)
Q Consensus 49 ~~i~~~~~~~~~~-~~~~~~~~~~i~~~d~~~~~~---~~~~----~~~~~~v~~~~~~~~----~~~~~~~~ 109 (125)
.....|++.|+++ +++ +...|.|++++.. +.. +..+ .........++++|+ +.++++-+
T Consensus 18 ~~P~~i~~~pdG~~l~V-~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~ 88 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLI-TLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYS 88 (353)
T ss_dssp SSEEEEEECSTTCCEEE-EETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEE
T ss_pred CCcEEEEEcCCCCEEEE-EeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEe
Confidence 4567999999998 554 4567999999843 321 1111 112345678999995 55555543
No 314
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=87.06 E-value=5.9 Score=27.54 Aligned_cols=74 Identities=15% Similarity=0.097 Sum_probs=45.2
Q ss_pred CCeEEEEECCCCCEEEEEeC--CCcEEEEEcCCCceeEEeCCCCCceeEEEEccC-CCeEEEeecCCeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGHE--DSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPS-AYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~--~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~ 122 (125)
.....++++|.+..++.... .+.|...+.............-...+.++++++ ++++++-...+.|...|+.+.
T Consensus 127 ~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~ 203 (619)
T 3s94_A 127 DQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT 203 (619)
T ss_dssp SCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCC
T ss_pred CCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCC
Confidence 45678899987655555442 456666665433222222223345678999985 455555566778888887653
No 315
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=86.83 E-value=3.8 Score=25.08 Aligned_cols=62 Identities=15% Similarity=0.119 Sum_probs=34.6
Q ss_pred CCCEEEEEeC-------CCcEEEEEcCCCceeEE--eCCCCCceeEEEEccCCCeEEEeecC-----CeEEEEeCCCC
Q psy14458 59 SGRLMVSGHE-------DSSCVLYDIRGSRPLQT--FKPHTADVRSIRFSPSAYYLLTGGYD-----NKLVLTDLQGT 122 (125)
Q Consensus 59 ~~~~~~~~~~-------~~~i~~~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~d-----~~i~~~~~~~~ 122 (125)
++..++.|+. ...+.+||..+.+.... +.........+.+ ++++++.|+.+ ..+.+||+.+.
T Consensus 155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 155 GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTN 230 (302)
T ss_dssp TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTT
T ss_pred CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCC
Confidence 4555565543 24588999887653332 2111111122222 77888888764 35888888754
No 316
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=86.74 E-value=3.7 Score=24.93 Aligned_cols=60 Identities=15% Similarity=0.179 Sum_probs=40.5
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEEcCCCce------eEEe-CCCCCceeEEEEccCCCeEEEeecCCeEE
Q psy14458 52 SALCVDPSGRLMVSGHEDSSCVLYDIRGSRP------LQTF-KPHTADVRSIRFSPSAYYLLTGGYDNKLV 115 (125)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~------~~~~-~~~~~~v~~~~~~~~~~~~~~~~~d~~i~ 115 (125)
.++.|.|++.+.++ .||.|+-++..+... ...+ ..--+.+..+.+.|+|.+.+.. |+.++
T Consensus 91 ~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 91 QFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp SEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred eEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 68899999998888 559888777543211 1111 1122467899999999888777 67654
No 317
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=86.51 E-value=8.8 Score=29.00 Aligned_cols=69 Identities=12% Similarity=0.134 Sum_probs=45.8
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCce--eEEeCCCCCceeEEEEccC------CCeEEEeec-CCeEEEEeC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRP--LQTFKPHTADVRSIRFSPS------AYYLLTGGY-DNKLVLTDL 119 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~v~~~~~~~~------~~~~~~~~~-d~~i~~~~~ 119 (125)
..|...+.+. .+++.++ .+.+.++++..++. .... .-...|.|+++.|. ..+++.|.. |++++++++
T Consensus 514 ~~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~~-~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL 589 (1158)
T 3ei3_A 514 KNISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISHT-EMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKL 589 (1158)
T ss_dssp CCCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEEE-ECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEET
T ss_pred CEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeeccc-CCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEEC
Confidence 4566666543 4566664 56777777765432 2222 23567999998763 478888885 999999998
Q ss_pred CC
Q psy14458 120 QG 121 (125)
Q Consensus 120 ~~ 121 (125)
..
T Consensus 590 ~~ 591 (1158)
T 3ei3_A 590 PS 591 (1158)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 318
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=86.37 E-value=4 Score=24.96 Aligned_cols=64 Identities=16% Similarity=0.119 Sum_probs=35.7
Q ss_pred CCCEEEEEeCC-----CcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCC-----eEEEEeCCCC
Q psy14458 59 SGRLMVSGHED-----SSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDN-----KLVLTDLQGT 122 (125)
Q Consensus 59 ~~~~~~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~-----~i~~~~~~~~ 122 (125)
++.+++.|+.+ ..+.+||..+.+....-........+.....++++++.|+.++ .+.+||+.+.
T Consensus 204 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 204 NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCC
Confidence 45666666543 4688999887654332111111111112222778888887653 4888888754
No 319
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=85.77 E-value=5.4 Score=25.88 Aligned_cols=70 Identities=13% Similarity=0.237 Sum_probs=49.1
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCCCC
Q psy14458 52 SALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTMRP 125 (125)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~ 125 (125)
.+.-++|..+.++.-. ...+.++|+.+.+.+..+.. ...|.--.|-.+ +.|+-.+ +..++-|++.+...|
T Consensus 70 dsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~-~~L~lVT-~taVyHWs~~~~s~P 139 (365)
T 2xzh_A 70 DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISL-NTVALVT-DNAVYHWSMEGESQP 139 (365)
T ss_dssp SEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSS-SEEEEEE-SSEEEEEESSTTCCC
T ss_pred ceeeeCCCccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCC-CeEEEEc-CCcEEEEcccCCCCC
Confidence 3556789888877775 77899999999999988874 456666677543 3343332 346889998765544
No 320
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=85.48 E-value=6.2 Score=26.27 Aligned_cols=61 Identities=11% Similarity=0.230 Sum_probs=39.7
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCce--eEEeCC------CCCceeEEEEcc----CCCeEEEee
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRP--LQTFKP------HTADVRSIRFSP----SAYYLLTGG 109 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~--~~~~~~------~~~~v~~~~~~~----~~~~~~~~~ 109 (125)
.....|+|.|++.++++-...+.|++++..+++. +..+.. .......++|+| ++.+.++-+
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s 99 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGT 99 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEE
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEe
Confidence 4567999999999777765445788887654432 223321 234567899999 455555544
No 321
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=85.46 E-value=4.5 Score=24.69 Aligned_cols=62 Identities=23% Similarity=0.201 Sum_probs=34.5
Q ss_pred CCCEEEEEeCC-----CcEEEEEcCCCcee--EEeCCCCCceeEEEEccCCCeEEEeecC-----CeEEEEeCCCC
Q psy14458 59 SGRLMVSGHED-----SSCVLYDIRGSRPL--QTFKPHTADVRSIRFSPSAYYLLTGGYD-----NKLVLTDLQGT 122 (125)
Q Consensus 59 ~~~~~~~~~~~-----~~i~~~d~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~d-----~~i~~~~~~~~ 122 (125)
++..++.|+.+ ..+.+||..+.+.. ..+.........+. .++++++.|+.+ ..+..+|+.+.
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~ 185 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHTG 185 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE--ECCEEEEECCCCCCcccceEEEEeCCCC
Confidence 45566666533 35888998776532 22221111112222 277788887754 45788887654
No 322
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=85.28 E-value=6.8 Score=26.55 Aligned_cols=71 Identities=6% Similarity=-0.037 Sum_probs=52.8
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDL 119 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~ 119 (125)
+..-++..++....+..-+.-|.+++||+.++.++..-+-....|..-+.+....-++.....|.+.-..+
T Consensus 259 DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v 329 (494)
T 1bpo_A 259 DFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCV 329 (494)
T ss_dssp CCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEE
T ss_pred CceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEE
Confidence 44567888888888999999999999999999998877766666665555555455555567776654443
No 323
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=84.93 E-value=5.9 Score=25.56 Aligned_cols=59 Identities=12% Similarity=0.196 Sum_probs=39.5
Q ss_pred CeEEEEECCCCCEEEEEe-CCCcEEEEEcCC-Cce--eEEeCCCCCceeEEEEcc-CCCeEEEee
Q psy14458 50 PVSALCVDPSGRLMVSGH-EDSSCVLYDIRG-SRP--LQTFKPHTADVRSIRFSP-SAYYLLTGG 109 (125)
Q Consensus 50 ~i~~~~~~~~~~~~~~~~-~~~~i~~~d~~~-~~~--~~~~~~~~~~v~~~~~~~-~~~~~~~~~ 109 (125)
..+.++|+|+++.+..+. ..+.|+.|++.. ++. ...+. .....-.++..+ +|++.+++.
T Consensus 222 ~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 222 FANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-FDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSEEEEEEECTTTCCEEEEEE
T ss_pred ccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-CCCCCceEEEeCCCCcEEEEec
Confidence 457899999997766554 567899999863 321 22332 234556788888 588777654
No 324
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=83.62 E-value=5.8 Score=24.47 Aligned_cols=62 Identities=13% Similarity=0.228 Sum_probs=34.0
Q ss_pred CCCEEEEEeCCC-----cEEEEEcCCCceeEEeC--CCCCceeEEEEccCCCeEEEeecCC--------------eEEEE
Q psy14458 59 SGRLMVSGHEDS-----SCVLYDIRGSRPLQTFK--PHTADVRSIRFSPSAYYLLTGGYDN--------------KLVLT 117 (125)
Q Consensus 59 ~~~~~~~~~~~~-----~i~~~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~d~--------------~i~~~ 117 (125)
++.+++.|+.++ .+.+||..+.+....-. ........+.+ ++++++.|+.++ .+.+|
T Consensus 196 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~y 273 (315)
T 4asc_A 196 DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL--VGTLYAIGGFATLETESGELVPTELNDIWRY 273 (315)
T ss_dssp TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEE
T ss_pred CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEE--CCEEEEECCccccCcCCccccccccCcEEEe
Confidence 455666665443 47889988765333221 11111122222 677788777532 36778
Q ss_pred eCCCC
Q psy14458 118 DLQGT 122 (125)
Q Consensus 118 ~~~~~ 122 (125)
|+.+.
T Consensus 274 d~~~~ 278 (315)
T 4asc_A 274 NEEEK 278 (315)
T ss_dssp ETTTT
T ss_pred cCCCC
Confidence 87654
No 325
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=83.39 E-value=2.6 Score=30.01 Aligned_cols=30 Identities=20% Similarity=0.192 Sum_probs=24.2
Q ss_pred ceeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 92 DVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 92 ~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
.|.++.+ +..++++-+.|.++++|++.++.
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~ 252 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFT 252 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCc
Confidence 3555544 67899999999999999998864
No 326
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=83.26 E-value=13 Score=28.16 Aligned_cols=73 Identities=25% Similarity=0.186 Sum_probs=48.0
Q ss_pred CCCeEEEEECCC------CCEEEEEeC-CCcEEEEEcCCCceeEEeCC-CCCceeEEEEcc--CCCeEEEeecCCeEEEE
Q psy14458 48 GSPVSALCVDPS------GRLMVSGHE-DSSCVLYDIRGSRPLQTFKP-HTADVRSIRFSP--SAYYLLTGGYDNKLVLT 117 (125)
Q Consensus 48 ~~~i~~~~~~~~------~~~~~~~~~-~~~i~~~d~~~~~~~~~~~~-~~~~v~~~~~~~--~~~~~~~~~~d~~i~~~ 117 (125)
...|.|+++.|. ..+++.|.. |++++++++.+.+.+..... ......++.+.. ...++..|-.||.+.-+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 357899998863 368899986 99999999987665543321 122344444332 33577888889987655
Q ss_pred eCC
Q psy14458 118 DLQ 120 (125)
Q Consensus 118 ~~~ 120 (125)
.+.
T Consensus 633 ~~d 635 (1158)
T 3ei3_A 633 GLN 635 (1158)
T ss_dssp EEC
T ss_pred EEc
Confidence 443
No 327
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=83.19 E-value=1.2 Score=33.15 Aligned_cols=31 Identities=26% Similarity=0.248 Sum_probs=25.6
Q ss_pred eeEEEEccCCCeEEEeecCCeEEEEeCCCCC
Q psy14458 93 VRSIRFSPSAYYLLTGGYDNKLVLTDLQGTM 123 (125)
Q Consensus 93 v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 123 (125)
+.++...++..++++-+.|+++++|++.++.
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~ 270 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ 270 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCC
Confidence 4455666788899999999999999998763
No 328
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=82.42 E-value=7 Score=24.53 Aligned_cols=73 Identities=7% Similarity=-0.040 Sum_probs=46.1
Q ss_pred CCeEEEEECCCCCEEEEEe-CCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGRLMVSGH-EDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 122 (125)
.....+++++++..|..+. ..+.|..+|...................+++. .+.++.+-...+.|..++..++
T Consensus 166 ~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~-~~~lywtd~~~~~V~~~~~~~G 239 (318)
T 3sov_A 166 YWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF-EDILYWTDWSTHSILACNKYTG 239 (318)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEE-TTEEEEEETTTTEEEEEETTTC
T ss_pred CCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEe-CCEEEEEecCCCeEEEEECCCC
Confidence 4568999999766665554 56779999876433222222233445567764 3456666667788888887554
No 329
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=81.94 E-value=11 Score=26.34 Aligned_cols=60 Identities=22% Similarity=0.274 Sum_probs=41.2
Q ss_pred CCeEEEEECCCCCEEEEEeC------------CCcEEEEEcCCCceeEEeCC-CCCceeEEEEccCCCeEEEe
Q psy14458 49 SPVSALCVDPSGRLMVSGHE------------DSSCVLYDIRGSRPLQTFKP-HTADVRSIRFSPSAYYLLTG 108 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~------------~~~i~~~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~ 108 (125)
.....+.|+++|.+.+..+. .+.+..++..+++....+.. ....++.++|+||++.|...
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 34678999999988875432 22566677666765444432 34578999999999877664
No 330
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=81.18 E-value=7.5 Score=24.01 Aligned_cols=62 Identities=13% Similarity=0.171 Sum_probs=33.6
Q ss_pred CCCEEEEEeC------CCcEEEEEcCCCceeEEe--CCCCCceeEEEEccCCCeEEEeecC-----CeEEEEeCCCC
Q psy14458 59 SGRLMVSGHE------DSSCVLYDIRGSRPLQTF--KPHTADVRSIRFSPSAYYLLTGGYD-----NKLVLTDLQGT 122 (125)
Q Consensus 59 ~~~~~~~~~~------~~~i~~~d~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~d-----~~i~~~~~~~~ 122 (125)
++.+++.|+. ...+.+||..+.+....- .........+.+ ++++++.|+.+ ..+.+||+.+.
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTC
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCC
Confidence 4555566543 245899998876533321 111111122222 67777777653 34667887654
No 331
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=80.35 E-value=11 Score=25.54 Aligned_cols=70 Identities=13% Similarity=0.238 Sum_probs=48.4
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCCCC
Q psy14458 52 SALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTMRP 125 (125)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~ 125 (125)
.+.-++|..+.++.-. ...+.++|+.+.+.+..+.. ...|.--.|-.+. .|+-. .+..++-|++.+...|
T Consensus 69 dsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~-~e~VvfWkWis~~-~l~lV-T~taVyHWsi~~~s~P 138 (494)
T 1bpo_A 69 DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVALV-TDNAVYHWSMEGESQP 138 (494)
T ss_dssp SEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEETT-EEEEE-CSSEEEEEESSSSCCC
T ss_pred ceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceec-CCCceEEEecCCC-eEEEE-cCCeeEEecccCCCCc
Confidence 4566888888777764 77899999999999888874 3456666664432 33333 2456889998765444
No 332
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=80.05 E-value=13 Score=25.98 Aligned_cols=74 Identities=14% Similarity=0.167 Sum_probs=45.3
Q ss_pred CCeEEEEECCCCC-EEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEcc-CCCeEEEeec-CCeEEEEeCCCC
Q psy14458 49 SPVSALCVDPSGR-LMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSP-SAYYLLTGGY-DNKLVLTDLQGT 122 (125)
Q Consensus 49 ~~i~~~~~~~~~~-~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~-d~~i~~~~~~~~ 122 (125)
.....+++++.+. ++.+-...+.|.+.++........+...-.....++++| +|.++.+-.. .+.|...++.+.
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~ 156 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGS 156 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCC
Confidence 3467888887654 445555667899998765433222322334567899998 4555555423 567777776544
No 333
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=79.55 E-value=8.5 Score=23.66 Aligned_cols=62 Identities=18% Similarity=0.220 Sum_probs=35.3
Q ss_pred CCCEEEEEeCC-----CcEEEEEcCCCceeEE--eCCCCCceeEEEEccCCCeEEEeecC-----CeEEEEeCCCC
Q psy14458 59 SGRLMVSGHED-----SSCVLYDIRGSRPLQT--FKPHTADVRSIRFSPSAYYLLTGGYD-----NKLVLTDLQGT 122 (125)
Q Consensus 59 ~~~~~~~~~~~-----~~i~~~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~d-----~~i~~~~~~~~ 122 (125)
++.+++.|+.+ ..+.+||+.+.+.... +.........+.+ ++++++.|+.+ ..+.+||+.+.
T Consensus 215 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 215 HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCC
Confidence 45666666543 5689999887653321 1111111122222 77788888753 45788888764
No 334
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=78.76 E-value=3 Score=29.06 Aligned_cols=31 Identities=10% Similarity=0.233 Sum_probs=25.1
Q ss_pred CceeEEEEccCCCeEEEee-cCCeEEEEeCCC
Q psy14458 91 ADVRSIRFSPSAYYLLTGG-YDNKLVLTDLQG 121 (125)
Q Consensus 91 ~~v~~~~~~~~~~~~~~~~-~d~~i~~~~~~~ 121 (125)
+..+.+..+|||++++.++ .+.++.++|++.
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k 354 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDK 354 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGG
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeeh
Confidence 4456789999999988776 589999999863
No 335
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=78.49 E-value=11 Score=24.28 Aligned_cols=72 Identities=21% Similarity=0.244 Sum_probs=45.8
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCce--eEEeC----CCCCceeEEEEccC----CCeEEEee--cCCeEEE
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRP--LQTFK----PHTADVRSIRFSPS----AYYLLTGG--YDNKLVL 116 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~--~~~~~----~~~~~v~~~~~~~~----~~~~~~~~--~d~~i~~ 116 (125)
.....|++.|++.++++--..|.|++++...++. +..+. ........++++|+ +.+.++-+ .+..|.-
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 4678999999999877776689999998655543 22221 12456788999995 55555422 3344444
Q ss_pred EeCC
Q psy14458 117 TDLQ 120 (125)
Q Consensus 117 ~~~~ 120 (125)
+.+.
T Consensus 112 ~~~~ 115 (347)
T 3das_A 112 MLYD 115 (347)
T ss_dssp EEBC
T ss_pred EEeC
Confidence 4443
No 336
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=78.25 E-value=16 Score=28.77 Aligned_cols=70 Identities=13% Similarity=0.237 Sum_probs=46.5
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCCCCCC
Q psy14458 52 SALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQGTMRP 125 (125)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~ 125 (125)
.+.-++|..+.++.-. ..++.++|+.+.+.+.++.. ...|.--.|-.+ +.|+-.+ +..|+-|++.+...|
T Consensus 69 dsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~-~~l~lVT-~~aVyHW~~~~~s~P 138 (1630)
T 1xi4_A 69 DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISL-NTVALVT-DNAVYHWSMEGESQP 138 (1630)
T ss_pred hhhccCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCC-CeeEEEc-CCeEEEeccCCCCcc
Confidence 3555788887776664 77899999998888887764 345656666433 2333332 346999999765444
No 337
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=78.17 E-value=10 Score=23.75 Aligned_cols=68 Identities=12% Similarity=0.051 Sum_probs=41.9
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeC---CCCCceeEEEEccCCCeEEEeecCCeEEEEeC
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFK---PHTADVRSIRFSPSAYYLLTGGYDNKLVLTDL 119 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~ 119 (125)
..+..+++.+++..++.+. ++.+. +....++.-..+. .....+.++.|.+++. ++.++.+|.|.-++-
T Consensus 250 ~~~~~v~~~~~~~~~~~g~-~g~i~-~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 250 VGFLDLAYRTPNEVWLAGG-AGALL-CSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYVT 320 (327)
T ss_dssp SCEEEEEESSSSCEEEEES-TTCEE-EESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEECC
T ss_pred cceEEEEecCCCEEEEEeC-CCeEE-EeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEcC
Confidence 3578889988777766664 66663 3333344333332 1235577888876554 556667888777664
No 338
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=77.28 E-value=10 Score=23.35 Aligned_cols=64 Identities=11% Similarity=0.024 Sum_probs=34.4
Q ss_pred CCCEEEEEeC------CCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCC-----eEEEEeCCCC
Q psy14458 59 SGRLMVSGHE------DSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDN-----KLVLTDLQGT 122 (125)
Q Consensus 59 ~~~~~~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~-----~i~~~~~~~~ 122 (125)
++..++.|+. -..+.+||..+.+....-........+....-++++++.|+.++ .+.++|+.+.
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCC
Confidence 4556666654 24688999887643221111111111112222777888887644 4778887654
No 339
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=73.93 E-value=20 Score=25.00 Aligned_cols=73 Identities=16% Similarity=0.157 Sum_probs=44.9
Q ss_pred CCeEEEEECCC-CCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccC-CCeEEEeec-CCeEEEEeCCC
Q psy14458 49 SPVSALCVDPS-GRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPS-AYYLLTGGY-DNKLVLTDLQG 121 (125)
Q Consensus 49 ~~i~~~~~~~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~-d~~i~~~~~~~ 121 (125)
.....++++.. ++++.+-...+.|.+.++........+...-.....+++.|. |.++++-.. ...|.-.++..
T Consensus 392 ~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG 467 (619)
T 3s94_A 392 AHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDG 467 (619)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCC
Confidence 45678888864 445555556788999987654332223333355788999985 665555433 35666666544
No 340
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=72.73 E-value=14 Score=22.70 Aligned_cols=62 Identities=18% Similarity=0.161 Sum_probs=35.0
Q ss_pred CCCEEEEEeCC-----CcEEEEEcCCCceeEE--eCCCCCceeEEEEccCCCeEEEeecC-----CeEEEEeCCCC
Q psy14458 59 SGRLMVSGHED-----SSCVLYDIRGSRPLQT--FKPHTADVRSIRFSPSAYYLLTGGYD-----NKLVLTDLQGT 122 (125)
Q Consensus 59 ~~~~~~~~~~~-----~~i~~~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~d-----~~i~~~~~~~~ 122 (125)
++.+++.|+.+ ..+.+||..+.+.... +.........+.+ ++++++.|+.+ ..+.+||+.+.
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCC
Confidence 45566666543 4588899877643221 1111111122223 77788888764 45888888654
No 341
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=72.17 E-value=16 Score=23.27 Aligned_cols=61 Identities=18% Similarity=0.257 Sum_probs=35.3
Q ss_pred CCeEEEEECCC---CCEEEEEeC----C----CcEEEEEcCCC-------ceeE-EeCC-CCCceeEEEEccCCCeEEEe
Q psy14458 49 SPVSALCVDPS---GRLMVSGHE----D----SSCVLYDIRGS-------RPLQ-TFKP-HTADVRSIRFSPSAYYLLTG 108 (125)
Q Consensus 49 ~~i~~~~~~~~---~~~~~~~~~----~----~~i~~~d~~~~-------~~~~-~~~~-~~~~v~~~~~~~~~~~~~~~ 108 (125)
.....|+++|+ +..|..+.. + +.|..++.... +.+. .+.. ....-..+.|.|||.++++.
T Consensus 73 ~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~ 152 (354)
T 3a9g_A 73 AGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITT 152 (354)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEEC
T ss_pred CceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEE
Confidence 46789999997 444443332 2 56777776543 1111 1221 11123579999999877774
Q ss_pred e
Q psy14458 109 G 109 (125)
Q Consensus 109 ~ 109 (125)
+
T Consensus 153 G 153 (354)
T 3a9g_A 153 G 153 (354)
T ss_dssp C
T ss_pred C
Confidence 3
No 342
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=69.98 E-value=18 Score=22.95 Aligned_cols=61 Identities=18% Similarity=0.218 Sum_probs=36.3
Q ss_pred CCeEEEEECCC---CCEEEEEeC-C-----CcEEEEEcCCC-----ceeE-EeCC---CCCceeEEEEccCCCeEEEee
Q psy14458 49 SPVSALCVDPS---GRLMVSGHE-D-----SSCVLYDIRGS-----RPLQ-TFKP---HTADVRSIRFSPSAYYLLTGG 109 (125)
Q Consensus 49 ~~i~~~~~~~~---~~~~~~~~~-~-----~~i~~~d~~~~-----~~~~-~~~~---~~~~v~~~~~~~~~~~~~~~~ 109 (125)
.....++++|+ +..+..+.. . +.|..++.... +.+. .+.. .......+.|.|||.++++.+
T Consensus 75 ~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 75 SGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred CCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 56889999998 444444332 2 56777877643 1222 2331 111235799999998777643
No 343
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=69.26 E-value=20 Score=24.68 Aligned_cols=67 Identities=9% Similarity=0.085 Sum_probs=43.8
Q ss_pred CeEEEEECCC--CCEEEEEeCCCcEEEEEcCCC----ceeEEeC--CCCCcee-EEEEccCCCeEEEeecCCeEEE
Q psy14458 50 PVSALCVDPS--GRLMVSGHEDSSCVLYDIRGS----RPLQTFK--PHTADVR-SIRFSPSAYYLLTGGYDNKLVL 116 (125)
Q Consensus 50 ~i~~~~~~~~--~~~~~~~~~~~~i~~~d~~~~----~~~~~~~--~~~~~v~-~~~~~~~~~~~~~~~~d~~i~~ 116 (125)
.++.++.... ...++.|+.+|.|.-..+... .....+. ....+|. .+.+++++.+|..++.++.+++
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 4666666553 356788999999765444322 1233332 2345775 8999999999999988876655
No 344
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=68.73 E-value=29 Score=24.70 Aligned_cols=67 Identities=15% Similarity=0.280 Sum_probs=42.8
Q ss_pred CeEEEEEC----CCC--CEEEEEeCCCcEE-EEEcCCCc-------eeEEeC--CCCCceeEEEEccCCCeEEEeecCCe
Q psy14458 50 PVSALCVD----PSG--RLMVSGHEDSSCV-LYDIRGSR-------PLQTFK--PHTADVRSIRFSPSAYYLLTGGYDNK 113 (125)
Q Consensus 50 ~i~~~~~~----~~~--~~~~~~~~~~~i~-~~d~~~~~-------~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~d~~ 113 (125)
..+.++.+ +++ ..++.|+.+|.|. +....... .+..+. ....+|..+.++++..+|..++.++.
T Consensus 413 ~lT~IaVd~v~~~~g~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V 492 (667)
T 4gz8_A 413 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 492 (667)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceeEEEEEEEecCCCcEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEE
Confidence 34556653 233 4678899999975 43322211 122222 34567899999999999999999887
Q ss_pred EEE
Q psy14458 114 LVL 116 (125)
Q Consensus 114 i~~ 116 (125)
+++
T Consensus 493 ~kV 495 (667)
T 4gz8_A 493 AQL 495 (667)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 345
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=66.59 E-value=37 Score=27.01 Aligned_cols=66 Identities=6% Similarity=-0.032 Sum_probs=41.8
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeE
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKL 114 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i 114 (125)
+...++..++....+..-+.-|.++++|+.++.++..-+-....|...+.+....-++.....|.+
T Consensus 259 Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~v 324 (1630)
T 1xi4_A 259 DFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQV 324 (1630)
T ss_pred CcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEEcCCceE
Confidence 344577788888888888899999999999988776555444444433333322233333344443
No 346
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=65.30 E-value=22 Score=22.22 Aligned_cols=53 Identities=17% Similarity=0.209 Sum_probs=27.6
Q ss_pred CCCEEEEEeC----------CCcEEEEEcCCCceeEEeCCC-CCceeEEEEccCCCeEEEeecC
Q psy14458 59 SGRLMVSGHE----------DSSCVLYDIRGSRPLQTFKPH-TADVRSIRFSPSAYYLLTGGYD 111 (125)
Q Consensus 59 ~~~~~~~~~~----------~~~i~~~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~d 111 (125)
++.+++.|+. -..+.+||..+.+....-... .....+.....++++++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVN 128 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCC
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcC
Confidence 4555666554 246889998876533211111 1111121222477888888754
No 347
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=64.28 E-value=31 Score=23.48 Aligned_cols=67 Identities=15% Similarity=0.206 Sum_probs=44.2
Q ss_pred CeEEEEECCC----C--CEEEEEeCCCcEEEEEc-CCCc-------eeEEeCC--CCCceeEEEEccCCCeEEEeecCCe
Q psy14458 50 PVSALCVDPS----G--RLMVSGHEDSSCVLYDI-RGSR-------PLQTFKP--HTADVRSIRFSPSAYYLLTGGYDNK 113 (125)
Q Consensus 50 ~i~~~~~~~~----~--~~~~~~~~~~~i~~~d~-~~~~-------~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~d~~ 113 (125)
..+.|+...- + ..++.|+.+|.|.-.-+ ..+. .+..+.. ...+|..+.++++..+|..++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 4677766642 3 46788999999754333 2211 2333432 3578999999999999999999887
Q ss_pred EEE
Q psy14458 114 LVL 116 (125)
Q Consensus 114 i~~ 116 (125)
+++
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 348
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=60.66 E-value=28 Score=21.74 Aligned_cols=65 Identities=14% Similarity=0.266 Sum_probs=39.1
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEE-EEEc--CCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEE
Q psy14458 49 SPVSALCVDPSGRLMVSGHEDSSCV-LYDI--RGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLT 117 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~~~~~i~-~~d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~ 117 (125)
..+..+++.+++.+++.+. +|.+. -.|- .+-+.+ -......+..+.+.+++.+++. +.+|.+...
T Consensus 163 ~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~gG~tW~~~--~~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s 230 (327)
T 2xbg_A 163 GVMRNLNRSPSGEYVAVSS-RGSFYSTWEPGQTAWEPH--NRTTSRRLHNMGFTPDGRLWMI-VNGGKIAFS 230 (327)
T ss_dssp CCEEEEEECTTSCEEEEET-TSSEEEEECTTCSSCEEE--ECCSSSCEEEEEECTTSCEEEE-ETTTEEEEE
T ss_pred cceEEEEEcCCCcEEEEEC-CCcEEEEeCCCCCceeEC--CCCCCCccceeEECCCCCEEEE-eCCceEEEe
Confidence 4678889999888777664 44443 3332 112222 1234556788888888876644 456666655
No 349
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=59.81 E-value=32 Score=22.15 Aligned_cols=31 Identities=10% Similarity=0.111 Sum_probs=23.5
Q ss_pred CceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 91 ADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 91 ~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
.....++|.|||.++++....|.|+.++..+
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~ 62 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKT 62 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTT
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCC
Confidence 4457899999998887776678888887543
No 350
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=59.30 E-value=44 Score=23.61 Aligned_cols=69 Identities=17% Similarity=0.094 Sum_probs=40.4
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeEEeCCCCCceeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 50 PVSALCVDPSGRLMVSGHEDSSCVLYDIRGSRPLQTFKPHTADVRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 50 ~i~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
.|.++...+++..+-.|+. +-+..+|..+++...........|.++....+|.+.+. +.+ -+.+++.++
T Consensus 192 ~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-T~~-Gl~~~~~~~ 260 (758)
T 3ott_A 192 FVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAG-TDN-GLYVYHNDT 260 (758)
T ss_dssp CEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEE-ETT-EEEEECCTT
T ss_pred eeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEE-eCC-ceeEEecCC
Confidence 4778887776664444443 45778887765432211112345778887777765554 343 467777654
No 351
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=57.17 E-value=31 Score=21.20 Aligned_cols=64 Identities=11% Similarity=0.048 Sum_probs=33.2
Q ss_pred CCCCCEEEEEeC----CC-------cEEEEEcCCCceeEE--eCCCCCceeEEEEccCCCeEEEeecC-------CeEEE
Q psy14458 57 DPSGRLMVSGHE----DS-------SCVLYDIRGSRPLQT--FKPHTADVRSIRFSPSAYYLLTGGYD-------NKLVL 116 (125)
Q Consensus 57 ~~~~~~~~~~~~----~~-------~i~~~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~d-------~~i~~ 116 (125)
..++..++.|+. ++ .+..+|..+.+.... +...........+ ++++++.|+.+ ..+.+
T Consensus 54 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~ 131 (318)
T 2woz_A 54 TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLC 131 (318)
T ss_dssp CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEE
T ss_pred EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEE
Confidence 445667777762 11 177888877653221 1111111112222 67777877754 24777
Q ss_pred EeCCCC
Q psy14458 117 TDLQGT 122 (125)
Q Consensus 117 ~~~~~~ 122 (125)
+|+.+.
T Consensus 132 yd~~~~ 137 (318)
T 2woz_A 132 YDPVAA 137 (318)
T ss_dssp EETTTT
T ss_pred EeCCCC
Confidence 777654
No 352
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=55.08 E-value=52 Score=23.10 Aligned_cols=56 Identities=5% Similarity=0.039 Sum_probs=37.6
Q ss_pred CEEEEEeCCCcEEEEEcCC-C----c-eeEEeC--CCCCceeEEEEccCCCeEEEeecCCeEEE
Q psy14458 61 RLMVSGHEDSSCVLYDIRG-S----R-PLQTFK--PHTADVRSIRFSPSAYYLLTGGYDNKLVL 116 (125)
Q Consensus 61 ~~~~~~~~~~~i~~~d~~~-~----~-~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~d~~i~~ 116 (125)
..++.|+.+|.|.-.-... + . .+..+. ....+|..+.++++...|..++.++.+++
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 4678899999976433322 2 1 122232 24567889999999889999888877665
No 353
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=49.15 E-value=68 Score=22.71 Aligned_cols=64 Identities=16% Similarity=0.206 Sum_probs=36.2
Q ss_pred CCCEEEEEeCC------CcEEEEEcCCCceeEEeCCCCC-ceeEEEEccCCCeEEEeecCC--eEEEEeCCCC
Q psy14458 59 SGRLMVSGHED------SSCVLYDIRGSRPLQTFKPHTA-DVRSIRFSPSAYYLLTGGYDN--KLVLTDLQGT 122 (125)
Q Consensus 59 ~~~~~~~~~~~------~~i~~~d~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~d~--~i~~~~~~~~ 122 (125)
++..++.|+.+ +.+.+||..+.+....-..... .-.+.....++.+++.|+.++ .+.+||..+.
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~ 523 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEE 523 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTT
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCC
Confidence 56666666533 3478888877543221111111 112333334788888887654 6888887654
No 354
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=46.99 E-value=71 Score=22.32 Aligned_cols=68 Identities=10% Similarity=0.140 Sum_probs=43.8
Q ss_pred CeEEEEECCC------CCEEEEEeCCCcEE-EEEcCC-----C--ceeEEeCC-----------CCCceeEEEEccCCCe
Q psy14458 50 PVSALCVDPS------GRLMVSGHEDSSCV-LYDIRG-----S--RPLQTFKP-----------HTADVRSIRFSPSAYY 104 (125)
Q Consensus 50 ~i~~~~~~~~------~~~~~~~~~~~~i~-~~d~~~-----~--~~~~~~~~-----------~~~~v~~~~~~~~~~~ 104 (125)
..+.|++... ...++.|+++|.|. +..... . ..+..+.. ...+|..+.++++...
T Consensus 404 ~lT~IaVd~~~g~~~~ytVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls~~~~~ 483 (565)
T 3oky_B 404 RLTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGS 483 (565)
T ss_dssp CEEEEEEEEEETTTTCEEEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEEGGGTE
T ss_pred ceEEEEEEEEecCCCceEEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceEEEEEcCCCCE
Confidence 3577777642 35678899999975 443221 1 11222221 1457889999999899
Q ss_pred EEEeecCCeEEEE
Q psy14458 105 LLTGGYDNKLVLT 117 (125)
Q Consensus 105 ~~~~~~d~~i~~~ 117 (125)
|..++.++.+++-
T Consensus 484 LYV~s~~~V~qVP 496 (565)
T 3oky_B 484 LYVAFSTCVIKVP 496 (565)
T ss_dssp EEEECSSCEEEEE
T ss_pred EEEEecCeEEEee
Confidence 9999888877653
No 355
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=43.68 E-value=86 Score=22.33 Aligned_cols=67 Identities=10% Similarity=0.197 Sum_probs=43.3
Q ss_pred CeEEEEEC----CCC---CEEEEEeCCCcEE-EEEcCCCc-eeEEeC--CCCCceeEEEEccCC--CeEEEeecCCeEEE
Q psy14458 50 PVSALCVD----PSG---RLMVSGHEDSSCV-LYDIRGSR-PLQTFK--PHTADVRSIRFSPSA--YYLLTGGYDNKLVL 116 (125)
Q Consensus 50 ~i~~~~~~----~~~---~~~~~~~~~~~i~-~~d~~~~~-~~~~~~--~~~~~v~~~~~~~~~--~~~~~~~~d~~i~~ 116 (125)
..+.|+.. .++ ..++.|+.+|.|. +....... .+..+. ....+|..+.++++. .+|..++.++.+++
T Consensus 398 ~~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 398 NYTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp CEEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred ceEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 45677764 233 4688899999975 43443322 222222 245688899999987 89999888876655
No 356
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=43.29 E-value=73 Score=21.40 Aligned_cols=61 Identities=10% Similarity=0.136 Sum_probs=38.4
Q ss_pred CCeEEEEECCCCC-EEEEEeCCCcEEEEEcCCC---ceeEEeCC---------CCCceeEEEEccC----CCeEEEee
Q psy14458 49 SPVSALCVDPSGR-LMVSGHEDSSCVLYDIRGS---RPLQTFKP---------HTADVRSIRFSPS----AYYLLTGG 109 (125)
Q Consensus 49 ~~i~~~~~~~~~~-~~~~~~~~~~i~~~d~~~~---~~~~~~~~---------~~~~v~~~~~~~~----~~~~~~~~ 109 (125)
.....|++.|++. .++.+...|.|++++.... +.+..+.. .......|+++|+ +.+.++-+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt 91 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYT 91 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEE
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEe
Confidence 4567899999985 4555567899999974322 22332221 1346778999995 55555543
No 357
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=40.33 E-value=95 Score=21.89 Aligned_cols=19 Identities=16% Similarity=0.410 Sum_probs=15.8
Q ss_pred CCeEEEEECCCCCEEEEEe
Q psy14458 49 SPVSALCVDPSGRLMVSGH 67 (125)
Q Consensus 49 ~~i~~~~~~~~~~~~~~~~ 67 (125)
..++.++|+|+++.|+..-
T Consensus 531 aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 531 CEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEEECTTSSEEEEEE
T ss_pred ccccCCEECCCCCEEEEEE
Confidence 5689999999998877764
No 358
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=39.92 E-value=91 Score=21.55 Aligned_cols=68 Identities=18% Similarity=0.181 Sum_probs=44.1
Q ss_pred CCeEEEEECCC--CCEEEEEeCCCcEEEEEcC-CC--ceeEEeC-CCCCce-eEEEEccCCCeEEEeecCCeEEE
Q psy14458 49 SPVSALCVDPS--GRLMVSGHEDSSCVLYDIR-GS--RPLQTFK-PHTADV-RSIRFSPSAYYLLTGGYDNKLVL 116 (125)
Q Consensus 49 ~~i~~~~~~~~--~~~~~~~~~~~~i~~~d~~-~~--~~~~~~~-~~~~~v-~~~~~~~~~~~~~~~~~d~~i~~ 116 (125)
...+.|+.... ...++.|+.+|.|.-.-.. .+ ..+..+. ....+| ..+.++++..+|..++.++.+++
T Consensus 387 ~~lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 387 IQLTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp CCEEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEESSTTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred CceEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeeccCCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 34677776543 2567789999997644433 22 1222222 244567 48999999899999988887765
No 359
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=36.89 E-value=1.1e+02 Score=21.81 Aligned_cols=28 Identities=14% Similarity=0.227 Sum_probs=23.2
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEE
Q psy14458 47 QGSPVSALCVDPSGRLMVSGHEDSSCVL 74 (125)
Q Consensus 47 ~~~~i~~~~~~~~~~~~~~~~~~~~i~~ 74 (125)
.+.+|..|.++++...|..++..+.+++
T Consensus 468 ~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 468 EPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp SCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred CCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 4477889999999999999988887665
No 360
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=34.51 E-value=1.3e+02 Score=21.65 Aligned_cols=66 Identities=11% Similarity=0.137 Sum_probs=41.3
Q ss_pred eEEEEECC--CCCEEEEEeCCCcEEEEEcCC-C---ceeEEeC--CCCCce-eEEEEccCCCeEEEeecCCeEEE
Q psy14458 51 VSALCVDP--SGRLMVSGHEDSSCVLYDIRG-S---RPLQTFK--PHTADV-RSIRFSPSAYYLLTGGYDNKLVL 116 (125)
Q Consensus 51 i~~~~~~~--~~~~~~~~~~~~~i~~~d~~~-~---~~~~~~~--~~~~~v-~~~~~~~~~~~~~~~~~d~~i~~ 116 (125)
.+.++... +...++.|+.+|.|.-.-+.. . ..+..+. ....+| ..+.++++..+|..++.++.+++
T Consensus 401 lT~VaV~~~~~~tVlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~~Lyv~s~~~V~qv 475 (681)
T 3oky_A 401 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 475 (681)
T ss_dssp BCCCEEEEETTEEEEEEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEEEecCceEEEEEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcCCCCEEEEEecCEEEEE
Confidence 44444443 235678899999987544432 1 1222332 234566 68999998889988888777665
No 361
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=34.23 E-value=90 Score=19.81 Aligned_cols=65 Identities=15% Similarity=0.376 Sum_probs=39.9
Q ss_pred CeEEEEECC-------CCCEEEEEeCCCcEEEEEcCCCceeEE--e-CCCCCceeEEEEccCCCeEEEee-cCCeE
Q psy14458 50 PVSALCVDP-------SGRLMVSGHEDSSCVLYDIRGSRPLQT--F-KPHTADVRSIRFSPSAYYLLTGG-YDNKL 114 (125)
Q Consensus 50 ~i~~~~~~~-------~~~~~~~~~~~~~i~~~d~~~~~~~~~--~-~~~~~~v~~~~~~~~~~~~~~~~-~d~~i 114 (125)
....+++.+ ++.+++..-..+.|...++..++.... + ......+..+.+.|||.++++.. .++.|
T Consensus 272 ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g~I 347 (353)
T 2g8s_A 272 AVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSGEL 347 (353)
T ss_dssp CEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTEEE
T ss_pred CcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCCEE
Confidence 456677754 356666666777788777765543222 2 12234688899999998776533 34443
No 362
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=34.09 E-value=1.2e+02 Score=21.29 Aligned_cols=19 Identities=21% Similarity=0.564 Sum_probs=15.6
Q ss_pred CCCeEEEEECCCCCEEEEE
Q psy14458 48 GSPVSALCVDPSGRLMVSG 66 (125)
Q Consensus 48 ~~~i~~~~~~~~~~~~~~~ 66 (125)
+..++.++|+|+++.|+..
T Consensus 530 gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 530 GCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp TCEEEEEEECTTSSEEEEE
T ss_pred CccCcCeeECCCCCEEEEE
Confidence 3789999999998877665
No 363
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=33.72 E-value=1.3e+02 Score=21.38 Aligned_cols=70 Identities=17% Similarity=0.329 Sum_probs=40.4
Q ss_pred EEECCCCCEEEEEeCCC--cEEEEEcCCCceeEEe-----CCCCCceeEEEEccC-CCeEEEeec--C-----CeEEEEe
Q psy14458 54 LCVDPSGRLMVSGHEDS--SCVLYDIRGSRPLQTF-----KPHTADVRSIRFSPS-AYYLLTGGY--D-----NKLVLTD 118 (125)
Q Consensus 54 ~~~~~~~~~~~~~~~~~--~i~~~d~~~~~~~~~~-----~~~~~~v~~~~~~~~-~~~~~~~~~--d-----~~i~~~~ 118 (125)
++...++.+++.|+.++ .+.+||..+.+....- ........++.+..+ +++++.|+. + ..+..||
T Consensus 495 ~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd 574 (695)
T 2zwa_A 495 ACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFK 574 (695)
T ss_dssp EEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEE
T ss_pred EEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEE
Confidence 33333677777776544 6899998876533211 111111223555554 677888775 2 3588888
Q ss_pred CCCCC
Q psy14458 119 LQGTM 123 (125)
Q Consensus 119 ~~~~~ 123 (125)
+.+..
T Consensus 575 ~~~~~ 579 (695)
T 2zwa_A 575 YDAEN 579 (695)
T ss_dssp ECTTC
T ss_pred ccCCc
Confidence 87654
No 364
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=31.38 E-value=92 Score=19.10 Aligned_cols=10 Identities=10% Similarity=0.242 Sum_probs=5.5
Q ss_pred CCcEEEEEcC
Q psy14458 69 DSSCVLYDIR 78 (125)
Q Consensus 69 ~~~i~~~d~~ 78 (125)
||.|+.|-..
T Consensus 80 ~G~v~~wG~n 89 (282)
T 3qhy_B 80 DGEVIAWGGN 89 (282)
T ss_dssp TTEEEEEECC
T ss_pred CCEEEEeeCC
Confidence 5666666543
No 365
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=28.49 E-value=1.3e+02 Score=20.00 Aligned_cols=54 Identities=9% Similarity=0.066 Sum_probs=31.5
Q ss_pred EEEEEeCCCcEEEEEcCC-Ccee----EEeCCCCCceeEEEEccCCC-eEEEeecCCeEE
Q psy14458 62 LMVSGHEDSSCVLYDIRG-SRPL----QTFKPHTADVRSIRFSPSAY-YLLTGGYDNKLV 115 (125)
Q Consensus 62 ~~~~~~~~~~i~~~d~~~-~~~~----~~~~~~~~~v~~~~~~~~~~-~~~~~~~d~~i~ 115 (125)
+++..-..+.|....+.. +... ..+......+..+.+.|||. ++++-...|.+.
T Consensus 371 lfv~~~~~~~i~~v~l~~~g~~~~~~~~~~~~~~~R~~dv~~gpDG~~Lyv~~d~~G~i~ 430 (454)
T 1cru_A 371 LLVPSLKRGVIFRIKLDPTYSTTYDDAVPMFKSNNRYRDVIASPDGNVLYVLTDTAGNVQ 430 (454)
T ss_dssp EEEEBSSSCCEEEEEECTTSSSEEEEEEEESCCSSCEEEEEECTTSSCEEEEECSSCCEE
T ss_pred EEEeecCCCEEEEEEECCCCCeeeeeeeeecccCCCceeEEECCCCCEEEEEECCCCCCc
Confidence 444444556677666653 3211 22222345788999999997 666655555544
No 366
>1zso_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.17A {Plasmodium falciparum} SCOP: b.166.1.1
Probab=28.36 E-value=87 Score=17.87 Aligned_cols=29 Identities=17% Similarity=0.279 Sum_probs=20.6
Q ss_pred eeEEEEccCCCeEEEeecCCeEEEEeCCC
Q psy14458 93 VRSIRFSPSAYYLLTGGYDNKLVLTDLQG 121 (125)
Q Consensus 93 v~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 121 (125)
+-=+.|.|++.+.+.+...|...=.|+..
T Consensus 112 lEp~eF~p~~~w~a~~~esG~f~dvDLse 140 (164)
T 1zso_A 112 IELIDFFPSNNFIVEDTKGKLYYDVNLSD 140 (164)
T ss_dssp EEEEEECCCSCEEEEETTSCEEEEECCTT
T ss_pred eeeEEEecCCcEEEEECCCCcEEeeecCC
Confidence 44478999999999886666555566654
No 367
>3mwp_A Nucleoprotein; structural genomics, scottish structural PROT facility, SSPF, nuclear protein; 1.79A {Lassa virus josiah} PDB: 3mwt_A 3mx2_A* 3mx5_A* 3r3l_A 3t5q_A 3t5n_A
Probab=25.65 E-value=17 Score=24.45 Aligned_cols=18 Identities=17% Similarity=0.401 Sum_probs=12.3
Q ss_pred ecCCCeEEEEECCCCcce
Q psy14458 4 GHEDSSCVLYDIRGSRPL 21 (125)
Q Consensus 4 ~~~d~~i~v~d~~~~~~~ 21 (125)
+..+|.|+|||+.....+
T Consensus 163 ~~~~GVVrvWDVkd~slL 180 (577)
T 3mwp_A 163 AGRDGVVRVWDVKNAELL 180 (577)
T ss_dssp ---CCEECSEECSCGGGG
T ss_pred CCCCCeEEEEecCCHHHH
Confidence 567899999999876554
No 368
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=24.63 E-value=1.7e+02 Score=19.97 Aligned_cols=27 Identities=15% Similarity=0.214 Sum_probs=22.5
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEE
Q psy14458 48 GSPVSALCVDPSGRLMVSGHEDSSCVL 74 (125)
Q Consensus 48 ~~~i~~~~~~~~~~~~~~~~~~~~i~~ 74 (125)
+.+|..|.++++..+|..++.++.+++
T Consensus 461 ~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 461 PTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp CCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred CCccceEEEcCCCCEEEEEECCeEEEE
Confidence 478899999999999999988876664
No 369
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=24.51 E-value=1.1e+02 Score=17.96 Aligned_cols=36 Identities=14% Similarity=0.058 Sum_probs=24.4
Q ss_pred CCeEEEEECCCC-CEEEEEeCCCcEEEEEcCCCceeE
Q psy14458 49 SPVSALCVDPSG-RLMVSGHEDSSCVLYDIRGSRPLQ 84 (125)
Q Consensus 49 ~~i~~~~~~~~~-~~~~~~~~~~~i~~~d~~~~~~~~ 84 (125)
.-+.++.|...+ .-+++.+.++.+.++|..-|+-..
T Consensus 119 ~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GEF~v 155 (188)
T 1ukf_A 119 KHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGEFQS 155 (188)
T ss_dssp EEEEEEEETTTEEEEEEEEEETTEEEEEETTTEEEEE
T ss_pred ceEEEEEecCCCceeEEeccCCCeEEEeCCCCceeec
Confidence 345556666543 456777789999999998766433
Done!