BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14461
(535 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2NVK|X Chain X, Crystal Structure Of Thioredoxin Reductase From Drosophila
Melanogaster
Length = 488
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 196/388 (50%), Gaps = 44/388 (11%)
Query: 156 NWNAATKLIKRFCIRAKNDSMR-ELKALGIDIVRTAAAFTNPHTI----KLSNRSVTGFN 210
+W+ + ++ I++ N R +L+ ++ + +F + HT+ K R++T
Sbjct: 95 DWHKLVQSVQNH-IKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGERTITAQT 153
Query: 211 FLLAVERRCLPEPRNSAL-------ISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFL 263
F++AV R PR + I++DDLF L PGKTLV+G + +E A L L
Sbjct: 154 FVIAVGGR----PRYPDIPGAVEYGITSDDLFSLDREPGKTLVVGAGYIGLECAGFLKGL 209
Query: 264 GVPVTLVYSRRLLKHFDQEMVRILLSSLTKAGVS-IQCCVIEKVISSFDGMKGVRGFHPE 322
G T++ +L+ FDQ+M ++ +S+ + G+ ++ V V DG V+ + E
Sbjct: 210 GYEPTVMVRSIVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVE 269
Query: 323 SKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIV 382
+ E DV+ TV+ A+ +K LNL + GV ++K V + ++ T+V NI+AVG I+
Sbjct: 270 TGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQKDKIPV-DSQEATNVANIYAVGDII 328
Query: 383 HGKPNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGA 442
+GKP +A ++ RL+ RLYG Q MDY + V +E+ VG+SEE A K +GA
Sbjct: 329 YGKPELTPVAVLAGRLLARRLYGGSTQRMDYKDVATTVFTPLEYACVGLSEEDAVKQFGA 388
Query: 443 DGLVIYKSSY-PTFDNLLDPLLPENFVKLVCLKG-GERVLGIHVIGQNNFVKLVCLKGGE 500
D + ++ Y PT + +P+ V+ LK ER G +
Sbjct: 389 DEIEVFHGYYKPT-----EFFIPQKSVRYCYLKAVAER------------------HGDQ 425
Query: 501 RVLGIHVIGQNVAGMIFGYSLALRKFLT 528
RV G+H IG +I G++ AL+ LT
Sbjct: 426 RVYGLHYIGPVAGEVIQGFAAALKSGLT 453
>pdb|3DH9|A Chain A, Crystal Structure Of Drosophila Thioredoxin Reductase,
Wild-Type
pdb|3DH9|B Chain B, Crystal Structure Of Drosophila Thioredoxin Reductase,
Wild-Type
Length = 482
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 196/388 (50%), Gaps = 44/388 (11%)
Query: 156 NWNAATKLIKRFCIRAKNDSMR-ELKALGIDIVRTAAAFTNPHTI----KLSNRSVTGFN 210
+W+ + ++ I++ N R +L+ ++ + +F + HT+ K R++T
Sbjct: 91 DWHKLVQSVQNH-IKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGERTITAQT 149
Query: 211 FLLAVERRCLPEPRNSAL-------ISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFL 263
F++AV R PR + I++DDLF L PGKTLV+G + +E A L L
Sbjct: 150 FVIAVGGR----PRYPDIPGAVEYGITSDDLFSLDREPGKTLVVGAGYIGLECAGFLKGL 205
Query: 264 GVPVTLVYSRRLLKHFDQEMVRILLSSLTKAGVS-IQCCVIEKVISSFDGMKGVRGFHPE 322
G T++ +L+ FDQ+M ++ +S+ + G+ ++ V V DG V+ + E
Sbjct: 206 GYEPTVMVRSIVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVE 265
Query: 323 SKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIV 382
+ E DV+ TV+ A+ +K LNL + GV ++K V + ++ T+V NI+AVG I+
Sbjct: 266 TGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQKDKIPV-DSQEATNVANIYAVGDII 324
Query: 383 HGKPNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGA 442
+GKP +A ++ RL+ RLYG Q MDY + V +E+ VG+SEE A K +GA
Sbjct: 325 YGKPELTPVAVLAGRLLARRLYGGSTQRMDYKDVATTVFTPLEYACVGLSEEDAVKQFGA 384
Query: 443 DGLVIYKSSY-PTFDNLLDPLLPENFVKLVCLKG-GERVLGIHVIGQNNFVKLVCLKGGE 500
D + ++ Y PT + +P+ V+ LK ER G +
Sbjct: 385 DEIEVFHGYYKPT-----EFFIPQKSVRYCYLKAVAER------------------HGDQ 421
Query: 501 RVLGIHVIGQNVAGMIFGYSLALRKFLT 528
RV G+H IG +I G++ AL+ LT
Sbjct: 422 RVYGLHYIGPVAGEVIQGFAAALKSGLT 449
>pdb|3DGH|A Chain A, Crystal Structure Of Drosophila Thioredoxin Reductase,
C-Terminal 8- Residue Truncation
pdb|3DGH|B Chain B, Crystal Structure Of Drosophila Thioredoxin Reductase,
C-Terminal 8- Residue Truncation
Length = 483
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 196/388 (50%), Gaps = 44/388 (11%)
Query: 156 NWNAATKLIKRFCIRAKNDSMR-ELKALGIDIVRTAAAFTNPHTI----KLSNRSVTGFN 210
+W+ + ++ I++ N R +L+ ++ + +F + HT+ K R++T
Sbjct: 95 DWHKLVQSVQNH-IKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGERTITAQT 153
Query: 211 FLLAVERRCLPEPRNSAL-------ISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFL 263
F++AV R PR + I++DDLF L PGKTLV+G + +E A L L
Sbjct: 154 FVIAVGGR----PRYPDIPGAVEYGITSDDLFSLDREPGKTLVVGAGYIGLECAGFLKGL 209
Query: 264 GVPVTLVYSRRLLKHFDQEMVRILLSSLTKAGVS-IQCCVIEKVISSFDGMKGVRGFHPE 322
G T++ +L+ FDQ+M ++ +S+ + G+ ++ V V DG V+ + E
Sbjct: 210 GYEPTVMVRSIVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVE 269
Query: 323 SKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIV 382
+ E DV+ TV+ A+ +K LNL + GV ++K V + ++ T+V NI+AVG I+
Sbjct: 270 TGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQKDKIPV-DSQEATNVANIYAVGDII 328
Query: 383 HGKPNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGA 442
+GKP +A ++ RL+ RLYG Q MDY + V +E+ VG+SEE A K +GA
Sbjct: 329 YGKPELTPVAVLAGRLLARRLYGGSTQRMDYKDVATTVFTPLEYACVGLSEEDAVKQFGA 388
Query: 443 DGLVIYKSSY-PTFDNLLDPLLPENFVKLVCLKG-GERVLGIHVIGQNNFVKLVCLKGGE 500
D + ++ Y PT + +P+ V+ LK ER G +
Sbjct: 389 DEIEVFHGYYKPT-----EFFIPQKSVRYCYLKAVAER------------------HGDQ 425
Query: 501 RVLGIHVIGQNVAGMIFGYSLALRKFLT 528
RV G+H IG +I G++ AL+ LT
Sbjct: 426 RVYGLHYIGPVAGEVIQGFAAALKSGLT 453
>pdb|3H4K|A Chain A, Crystal Structure Of The Wild Type Thioredoxin Glutatione
Reductase From Schistosoma Mansoni In Complex With
Auranofin
Length = 598
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 187/367 (50%), Gaps = 57/367 (15%)
Query: 195 NPHTIKLSNR-----SVTGFNFLLAV-ERRCLPEPRNSAL--ISADDLFRLGAWPGKTLV 246
+PH ++++++ ++TG +LA ER PE + I++DDLF L +PGKTLV
Sbjct: 232 SPHEVQITDKNQKVSTITGNKIILATGERPKYPEIPGAVEYGITSDDLFSLPYFPGKTLV 291
Query: 247 LGGSLMAVEIAATLNFLGVPVTLVYSRRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIE- 304
+G S +A+E A L LG VT++ LL+ FDQ+M + + GV + CV +
Sbjct: 292 IGASYVALECAGFLASLGGDVTVMVRSILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDE 351
Query: 305 ----KVISSFDGMKG---VRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIK 357
KV+ + + G V+G + + K+ F + F+TV+ A+ ++ + + +GV +
Sbjct: 352 IKQLKVVDTENNKPGLLLVKGHYTDGKK-FEEEFETVIFAVGREPQLSKVLCETVGVKLD 410
Query: 358 KKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYGMQDQLMDYSFLP 417
K VVC + +QT+V N++A+G I GKP +A + R + RL+ +L DYS +
Sbjct: 411 KNGRVVCTDDEQTTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAGATELTDYSNVA 470
Query: 418 VVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTF--------DNLLDPLLPENFVK 469
V +E+G G+SEE A + YG + +Y S++ DN+ ++K
Sbjct: 471 TTVFTPLEYGACGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAHREDNVC-------YMK 523
Query: 470 LVCLKGGE-RVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLT 528
LVC K RVLG+HV+G N GE + GY++A++ T
Sbjct: 524 LVCRKSDNMRVLGLHVLGPN---------AGE--------------ITQGYAVAIKMGAT 560
Query: 529 KAELDGT 535
KA+ D T
Sbjct: 561 KADFDRT 567
>pdb|2X8C|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
With The Reduced C-Terminal End
pdb|2X8C|B Chain B, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
With The Reduced C-Terminal End
pdb|2X8G|A Chain A, Oxidized Thioredoxin Glutathione Reductase From
Schistosoma Mansoni
pdb|2X8H|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
In Complex With Gsh
pdb|2X99|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
In Complex With Nadph
Length = 598
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 187/367 (50%), Gaps = 57/367 (15%)
Query: 195 NPHTIKLSNR-----SVTGFNFLLAV-ERRCLPEPRNSAL--ISADDLFRLGAWPGKTLV 246
+PH ++++++ ++TG +LA ER PE + I++DDLF L +PGKTLV
Sbjct: 232 SPHEVQITDKNQKVSTITGNKIILATGERPKYPEIPGAVEYGITSDDLFSLPYFPGKTLV 291
Query: 247 LGGSLMAVEIAATLNFLGVPVTLVYSRRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIE- 304
+G S +A+E A L LG VT++ LL+ FDQ+M + + GV + CV +
Sbjct: 292 IGASYVALECAGFLASLGGDVTVMVRSILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDE 351
Query: 305 ----KVISSFDGMKG---VRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIK 357
KV+ + + G V+G + + K+ F + F+TV+ A+ ++ + + +GV +
Sbjct: 352 IKQLKVVDTENNKPGLLLVKGHYTDGKK-FEEEFETVIFAVGREPQLSKVLCETVGVKLD 410
Query: 358 KKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYGMQDQLMDYSFLP 417
K VVC + +QT+V N++A+G I GKP +A + R + RL+ +L DYS +
Sbjct: 411 KNGRVVCTDDEQTTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAGATELTDYSNVA 470
Query: 418 VVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTF--------DNLLDPLLPENFVK 469
V +E+G G+SEE A + YG + +Y S++ DN+ ++K
Sbjct: 471 TTVFTPLEYGACGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAHREDNVC-------YMK 523
Query: 470 LVCLKGGE-RVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLT 528
LVC K RVLG+HV+G N GE + GY++A++ T
Sbjct: 524 LVCRKSDNMRVLGLHVLGPN---------AGE--------------ITQGYAVAIKMGAT 560
Query: 529 KAELDGT 535
KA+ D T
Sbjct: 561 KADFDRT 567
>pdb|2V6O|A Chain A, Structure Of Schistosoma Mansoni Thioredoxin-Glutathione
Reductase (Smtgr)
Length = 596
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 187/367 (50%), Gaps = 57/367 (15%)
Query: 195 NPHTIKLSNR-----SVTGFNFLLAV-ERRCLPEPRNSAL--ISADDLFRLGAWPGKTLV 246
+PH ++++++ ++TG +LA ER PE + I++DDLF L +PGKTLV
Sbjct: 232 SPHEVQITDKNQKVSTITGNKIILATGERPKYPEIPGAVEYGITSDDLFSLPYFPGKTLV 291
Query: 247 LGGSLMAVEIAATLNFLGVPVTLVYSRRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIE- 304
+G S +A+E A L LG VT++ LL+ FDQ+M + + GV + CV +
Sbjct: 292 IGASYVALECAGFLASLGGDVTVMVRSILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDE 351
Query: 305 ----KVISSFDGMKG---VRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIK 357
KV+ + + G V+G + + K+ F + F+TV+ A+ ++ + + +GV +
Sbjct: 352 IKQLKVVDTENNKPGLLLVKGHYTDGKK-FEEEFETVIFAVGREPQLSKVLCETVGVKLD 410
Query: 358 KKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYGMQDQLMDYSFLP 417
K VVC + +QT+V N++A+G I GKP +A + R + RL+ +L DYS +
Sbjct: 411 KNGRVVCTDDEQTTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAGATELTDYSNVA 470
Query: 418 VVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTF--------DNLLDPLLPENFVK 469
V +E+G G+SEE A + YG + +Y S++ DN+ ++K
Sbjct: 471 TTVFTPLEYGACGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAHREDNVC-------YMK 523
Query: 470 LVCLKGGE-RVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLT 528
LVC K RVLG+HV+G N GE + GY++A++ T
Sbjct: 524 LVCRKSDNMRVLGLHVLGPN---------AGE--------------ITQGYAVAIKMGAT 560
Query: 529 KAELDGT 535
KA+ D T
Sbjct: 561 KADFDRT 567
>pdb|3EAN|A Chain A, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|B Chain B, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|C Chain C, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|D Chain D, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|E Chain E, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|F Chain F, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAO|A Chain A, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|B Chain B, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|C Chain C, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|D Chain D, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|E Chain E, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|F Chain F, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
Length = 499
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/368 (30%), Positives = 178/368 (48%), Gaps = 58/368 (15%)
Query: 193 FTNPHTIKLSN-----RSVTGFNFLLAVERRCLPEPR-------NSALISADDLFRLGAW 240
F PH I +N + + FL+A R PR IS+DDLF L
Sbjct: 134 FIGPHKIMATNNKGKEKVYSAERFLIATGER----PRYLGIPGDKEYCISSDDLFSLPYC 189
Query: 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYSRRLLKHFDQEMVRILLSSLTKAGVS-IQ 299
PGKTLV+G S +A+E A L +G+ VT++ LL+ FDQ+M + + + G+ I+
Sbjct: 190 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIR 249
Query: 300 CCV---IEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDI 356
V IE++ + G V S+E D F TV+ A+ + + L +GV I
Sbjct: 250 QFVPTKIEQIEAGTPGRLKVTAKSTNSEETIEDEFNTVLLAVGRDSCTRTIGLETVGVKI 309
Query: 357 KKKS-YVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYGMQDQLMDYSF 415
+K+ + +++QT+V I+A+G I+ GK +A + RL+ +RLYG DY
Sbjct: 310 NEKTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLYGGSTVKCDYDN 369
Query: 416 LPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKS-------SYPTFDNLLDPLLPENFV 468
+P V +E+G G+SEE A + +G + + +Y S + P+ DN + +
Sbjct: 370 VPTTVFTPLEYGCCGLSEEKAVEKFGEENIEVYHSFFWPLEWTVPSRDN------NKCYA 423
Query: 469 KLVC-LKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFL 527
K++C LK ERV+G HV+G N GE + G++ AL+ L
Sbjct: 424 KVICNLKDNERVVGFHVLGPN---------AGE--------------VTQGFAAALKCGL 460
Query: 528 TKAELDGT 535
TK +LD T
Sbjct: 461 TKQQLDST 468
>pdb|1H6V|A Chain A, Mammalian Thioredoxin Reductase
pdb|1H6V|B Chain B, Mammalian Thioredoxin Reductase
pdb|1H6V|C Chain C, Mammalian Thioredoxin Reductase
pdb|1H6V|D Chain D, Mammalian Thioredoxin Reductase
pdb|1H6V|E Chain E, Mammalian Thioredoxin Reductase
pdb|1H6V|F Chain F, Mammalian Thioredoxin Reductase
Length = 499
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/368 (30%), Positives = 178/368 (48%), Gaps = 58/368 (15%)
Query: 193 FTNPHTIKLSN-----RSVTGFNFLLAVERRCLPEPR-------NSALISADDLFRLGAW 240
F PH I +N + + FL+A R PR IS+DDLF L
Sbjct: 134 FIGPHKIMATNNKGKEKVYSAERFLIATGER----PRYLGIPGDKEYCISSDDLFSLPYC 189
Query: 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYSRRLLKHFDQEMVRILLSSLTKAGVS-IQ 299
PGKTLV+G S +A+E A L +G+ VT++ LL+ FDQ+M + + + G+ I+
Sbjct: 190 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIR 249
Query: 300 CCV---IEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDI 356
V IE++ + G V S+E D F TV+ A+ + + L +GV I
Sbjct: 250 QFVPTKIEQIEAGTPGRLKVTAKSTNSEETIEDEFNTVLLAVGRDSCTRTIGLETVGVKI 309
Query: 357 KKKS-YVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYGMQDQLMDYSF 415
+K+ + +++QT+V I+A+G I+ GK +A + RL+ +RLYG DY
Sbjct: 310 NEKTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLYGGSTVKCDYDN 369
Query: 416 LPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKS-------SYPTFDNLLDPLLPENFV 468
+P V +E+G G+SEE A + +G + + +Y S + P+ DN + +
Sbjct: 370 VPTTVFTPLEYGCCGLSEEKAVEKFGEENIEVYHSFFWPLEWTVPSRDN------NKCYA 423
Query: 469 KLVC-LKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFL 527
K++C LK ERV+G HV+G N GE + G++ AL+ L
Sbjct: 424 KVICNLKDNERVVGFHVLGPN---------AGE--------------VTQGFAAALKCGL 460
Query: 528 TKAELDGT 535
TK +LD T
Sbjct: 461 TKQQLDST 468
>pdb|4B1B|A Chain A, Crystal Structure Of Plasmodium Falciparum Oxidised
Thioredoxin Reductase At 2.9 Angstrom
pdb|4B1B|B Chain B, Crystal Structure Of Plasmodium Falciparum Oxidised
Thioredoxin Reductase At 2.9 Angstrom
Length = 542
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 172/336 (51%), Gaps = 19/336 (5%)
Query: 204 RSVTGFNFLLAVE-RRCLPEPRNSAL---ISADDLFRLGAWPGKTLVLGGSLMAVEIAAT 259
+VTG L+A R +P+ A I++DD+F L PGKTLV+G S +A+E +
Sbjct: 182 ETVTGKYILIATGCRPHIPDDVEGAKELSITSDDIFSLKKDPGKTLVVGASYVALECSGF 241
Query: 260 LNFLGVPVTLVYSRRLLKHFDQEMVRILLSSLTKAGVSIQCCVIEKVISSFDGMKGVRGF 319
LN LG VT+ +L+ FDQ+ + + + GV + ++ K ++ D V
Sbjct: 242 LNSLGYDVTVAVRSIVLRGFDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILV--- 298
Query: 320 HPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKK-KSYVVCNEKDQTSVGNIFAV 378
E + ++++ TV+ A+ +K D LNL + +++ K + ++ + T++ +IFAV
Sbjct: 299 --EFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCTNIPSIFAV 356
Query: 379 GGIVHGKPNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAK 438
G + P A +A + ++ RL+ D++MDYS++P + +E+G G SEE A +
Sbjct: 357 GDVAENVPELAPVAIKAGEILARRLFKDSDEIMDYSYIPTSIYTPIEYGACGYSEEKAYE 416
Query: 439 VYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKG 498
+YG + ++ F+NL + + K + + E L + KLVCLK
Sbjct: 417 LYGKSNVEVF---LQEFNNL--EISAVHRQKHIRAQKDEYDLDV---SSTCLAKLVCLKN 468
Query: 499 GE-RVLGIHVIGQNVAGMIFGYSLALRKFLTKAELD 533
+ RV+G H +G N + G +LALR + K + D
Sbjct: 469 EDNRVIGFHYVGPNAGEVTQGMALALRLKVKKKDFD 504
>pdb|1ZDL|A Chain A, Crystal Structure Of Mouse Thioredoxin Reductase Type 2
pdb|1ZKQ|A Chain A, Crystal Structure Of Mouse Thioredoxin Reductase Type 2
Length = 517
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 180/353 (50%), Gaps = 25/353 (7%)
Query: 155 RNWNAATKLIKRFCIRAKNDSMR-ELKALGIDIVRTAAAFTNPHTIKLSNRSVTGFNFLL 213
NW + ++ +++ N R +L+ + A+F + HT++ ++ G LL
Sbjct: 116 HNWKTMAEAVQNH-VKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKG--GKATLL 172
Query: 214 AVE--------RRCLPEPRNSAL---ISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNF 262
+ E R P AL I++DD+F L PGKTLV+G S +A+E A L
Sbjct: 173 SAEHIVIATGGRPRYPTQVKGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTG 232
Query: 263 LGVPVTLVYSRRLLKHFDQEMVRILLSSLTKAGVS-IQCCV---IEKVISSFDGMKGVRG 318
+G+ T++ L+ FDQ+M ++ + G ++ CV I+K+ + + ++
Sbjct: 233 IGLDTTVMMRSIPLRGFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPT--NQLQVTWE 290
Query: 319 FHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSY-VVCNEKDQTSVGNIFA 377
H KE F TV+ A+ + + LNL G+ K+ ++ + ++ TSV +I+A
Sbjct: 291 DHASGKED-TGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQEATSVPHIYA 349
Query: 378 VGGIVHGKPNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAA 437
+G + G+P A + +L+ +RL+G LMDYS +P V +E+G VG+SEE A
Sbjct: 350 IGDVAEGRPELTPTAIKAGKLLAQRLFGKSSTLMDYSNVPTTVFTPLEYGCVGLSEEEAV 409
Query: 438 KVYGADGLVIYKSSYPTFD-NLLDPLLPENFVKLVCLKGGER-VLGIHVIGQN 488
++G + + +Y + Y + + D + ++K+VC++ + VLG+H +G N
Sbjct: 410 ALHGQEHVEVYHAYYKPLEFTVADRDASQCYIKMVCMREPPQLVLGLHFLGPN 462
>pdb|3DGZ|A Chain A, Crystal Structure Of Mouse Mitochondrial Thioredoxin
Reductase, C- Terminal 3-Residue Truncation
Length = 488
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 180/353 (50%), Gaps = 25/353 (7%)
Query: 155 RNWNAATKLIKRFCIRAKNDSMR-ELKALGIDIVRTAAAFTNPHTIKLSNRSVTGFNFLL 213
NW + ++ +++ N R +L+ + A+F + HT++ ++ G LL
Sbjct: 90 HNWKTMAEAVQNH-VKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKG--GKATLL 146
Query: 214 AVE--------RRCLPEPRNSAL---ISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNF 262
+ E R P AL I++DD+F L PGKTLV+G S +A+E A L
Sbjct: 147 SAEHIVIATGGRPRYPTQVKGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTG 206
Query: 263 LGVPVTLVYSRRLLKHFDQEMVRILLSSLTKAGVS-IQCCV---IEKVISSFDGMKGVRG 318
+G+ T++ L+ FDQ+M ++ + G ++ CV I+K+ + + ++
Sbjct: 207 IGLDTTVMMRSIPLRGFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPT--NQLQVTWE 264
Query: 319 FHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSY-VVCNEKDQTSVGNIFA 377
H KE F TV+ A+ + + LNL G+ K+ ++ + ++ TSV +I+A
Sbjct: 265 DHASGKED-TGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQEATSVPHIYA 323
Query: 378 VGGIVHGKPNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAA 437
+G + G+P A + +L+ +RL+G LMDYS +P V +E+G VG+SEE A
Sbjct: 324 IGDVAEGRPELTPTAIKAGKLLAQRLFGKSSTLMDYSNVPTTVFTPLEYGCVGLSEEEAV 383
Query: 438 KVYGADGLVIYKSSYPTFD-NLLDPLLPENFVKLVCLKGGER-VLGIHVIGQN 488
++G + + +Y + Y + + D + ++K+VC++ + VLG+H +G N
Sbjct: 384 ALHGQEHVEVYHAYYKPLEFTVADRDASQCYIKMVCMREPPQLVLGLHFLGPN 436
>pdb|2ZZ0|A Chain A, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|B Chain B, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|C Chain C, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|D Chain D, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZB|A Chain A, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|B Chain B, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|C Chain C, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|D Chain D, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZC|A Chain A, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|B Chain B, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|C Chain C, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|D Chain D, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
Length = 513
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 175/368 (47%), Gaps = 58/368 (15%)
Query: 193 FTNPHTIKLSN-----RSVTGFNFLLAVERRCLPEPR-------NSALISADDLFRLGAW 240
F PH IK +N + + FL+A R PR IS+DDLF L
Sbjct: 148 FIGPHRIKATNNKGKEKIYSAERFLIATGER----PRYLGIPGDKEYCISSDDLFSLPYC 203
Query: 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYSRRLLKHFDQEMVRILLSSLTKAGVS-IQ 299
PGKTLV+G S +A+E A L +G+ VT++ LL+ FDQ+M + + + G+ I+
Sbjct: 204 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIR 263
Query: 300 CCV---IEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDI 356
V +E++ + G V S+E + TV+ A+ + + L +GV I
Sbjct: 264 QFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKI 323
Query: 357 KKKS-YVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYGMQDQLMDYSF 415
+K+ + +++QT+V I+A+G I+ K +A + RL+ +RLY DY
Sbjct: 324 NEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYEN 383
Query: 416 LPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSY-------PTFDNLLDPLLPENFV 468
+P V +E+G G+SEE A + +G + + +Y S + P+ DN + +
Sbjct: 384 VPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSRDN------NKCYA 437
Query: 469 KLVC-LKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFL 527
K++C K ERV+G HV+G N GE + G++ AL+ L
Sbjct: 438 KIICNTKDNERVVGFHVLGPN---------AGE--------------VTQGFAAALKCGL 474
Query: 528 TKAELDGT 535
TK +LD T
Sbjct: 475 TKKQLDST 482
>pdb|2CFY|A Chain A, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|B Chain B, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|C Chain C, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|D Chain D, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|E Chain E, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|F Chain F, Crystal Structure Of Human Thioredoxin Reductase 1
Length = 521
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 178/364 (48%), Gaps = 50/364 (13%)
Query: 193 FTNPHTIKLSN-----RSVTGFNFLLAV-ER-RCLPEPRNSA-LISADDLFRLGAWPGKT 244
F PH IK +N + + FL+A ER R L P + IS+DDLF L PGKT
Sbjct: 156 FIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPGKT 215
Query: 245 LVLGGSLMAVEIAATLNFLGVPVTLVYSRRLLKHFDQEMVRILLSSLTKAGVS-IQCCV- 302
LV+G S +A+E A L +G+ VT++ LL+ FDQ+M + + + G+ I+ V
Sbjct: 216 LVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVP 275
Query: 303 --IEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKS 360
+E++ + G V S+E + TV+ A+ + + L +GV I +K+
Sbjct: 276 IKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKT 335
Query: 361 -YVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYGMQDQLMDYSFLPVV 419
+ +++QT+V I+A+G I+ K +A + RL+ +RLY DY +P
Sbjct: 336 GKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYENVPTT 395
Query: 420 VRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSY-------PTFDNLLDPLLPENFVKLVC 472
V +E+G G+SEE A + +G + + +Y S + P+ DN + + K++C
Sbjct: 396 VFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSRDN------NKCYAKIIC 449
Query: 473 -LKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAE 531
K ERV+G HV+G N GE + G++ AL+ LTK +
Sbjct: 450 NTKDNERVVGFHVLGPN---------AGE--------------VTQGFAAALKCGLTKKQ 486
Query: 532 LDGT 535
LD T
Sbjct: 487 LDST 490
>pdb|3QFA|A Chain A, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFA|B Chain B, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|A Chain A, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|B Chain B, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
Length = 519
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 175/368 (47%), Gaps = 58/368 (15%)
Query: 193 FTNPHTIKLSN-----RSVTGFNFLLAVERRCLPEPR-------NSALISADDLFRLGAW 240
F PH IK +N + + FL+A R PR IS+DDLF L
Sbjct: 154 FIGPHRIKATNNKGKEKIYSAERFLIATGER----PRYLGIPGDKEYCISSDDLFSLPYC 209
Query: 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYSRRLLKHFDQEMVRILLSSLTKAGVS-IQ 299
PGKTLV+G S +A+E A L +G+ VT++ LL+ FDQ+M + + + G+ I+
Sbjct: 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIR 269
Query: 300 CCV---IEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDI 356
V +E++ + G V S+E + TV+ A+ + + L +GV I
Sbjct: 270 QFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKI 329
Query: 357 KKKS-YVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYGMQDQLMDYSF 415
+K+ + +++QT+V I+A+G I+ K +A + RL+ +RLY DY
Sbjct: 330 NEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYEN 389
Query: 416 LPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSY-------PTFDNLLDPLLPENFV 468
+P V +E+G G+SEE A + +G + + +Y S + P+ DN + +
Sbjct: 390 VPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSRDN------NKCYA 443
Query: 469 KLVC-LKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFL 527
K++C K ERV+G HV+G N GE + G++ AL+ L
Sbjct: 444 KIICNTKDNERVVGFHVLGPN---------AGE--------------VTQGFAAALKCGL 480
Query: 528 TKAELDGT 535
TK +LD T
Sbjct: 481 TKKQLDST 488
>pdb|2J3N|A Chain A, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|B Chain B, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|C Chain C, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|D Chain D, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|E Chain E, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|F Chain F, X-Ray Structure Of Human Thioredoxin Reductase 1
Length = 519
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 175/368 (47%), Gaps = 58/368 (15%)
Query: 193 FTNPHTIKLSN-----RSVTGFNFLLAVERRCLPEPR-------NSALISADDLFRLGAW 240
F PH IK +N + + FL+A R PR IS+DDLF L
Sbjct: 154 FIGPHRIKATNNKGKEKIYSAERFLIATGER----PRYLGIPGDKEYCISSDDLFSLPYC 209
Query: 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYSRRLLKHFDQEMVRILLSSLTKAGVS-IQ 299
PGKTLV+G S +A+E A L +G+ VT++ LL+ FDQ+M + + + G+ I+
Sbjct: 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIR 269
Query: 300 CCV---IEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDI 356
V +E++ + G V S+E + TV+ A+ + + L +GV I
Sbjct: 270 QFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKI 329
Query: 357 KKKS-YVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYGMQDQLMDYSF 415
+K+ + +++QT+V I+A+G I+ K +A + RL+ +RLY DY
Sbjct: 330 NEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYEN 389
Query: 416 LPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSY-------PTFDNLLDPLLPENFV 468
+P V +E+G G+SEE A + +G + + +Y S + P+ DN + +
Sbjct: 390 VPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSRDN------NKCYA 443
Query: 469 KLVC-LKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFL 527
K++C K ERV+G HV+G N GE + G++ AL+ L
Sbjct: 444 KIICNTKDNERVVGFHVLGPN---------AGE--------------VTQGFAAALKCGL 480
Query: 528 TKAELDGT 535
TK +LD T
Sbjct: 481 TKKQLDST 488
>pdb|1GER|A Chain A, The Structure Of Glutathione Reductase From Escherichia
Coli At 1.86 Angstroms Resolution: Comparison With The
Enzyme From Human Erythrocytes
pdb|1GER|B Chain B, The Structure Of Glutathione Reductase From Escherichia
Coli At 1.86 Angstroms Resolution: Comparison With The
Enzyme From Human Erythrocytes
pdb|1GET|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GET|B Chain B, Anatomy Of An Engineered Nad-Binding Site
Length = 450
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 181/397 (45%), Gaps = 42/397 (10%)
Query: 149 ALNVTIRNWNAATKLIKR--FCIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLSNRSV 206
+ TI +N T + R + R L +D+++ A F + T++++ ++
Sbjct: 71 GFDTTINKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEVNGETI 130
Query: 207 TGFNFLLAVE-RRCLPE-PRNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLG 264
T + L+A R P+ P I +D F L A P + V+G +AVE+A +N LG
Sbjct: 131 TADHILIATGGRPSHPDIPGVEYGIDSDGFFALPALPERVAVVGAGYIAVELAGVINGLG 190
Query: 265 VPVTL-VYSRRLLKHFDQEMVRILLSSLTKAGVSIQCCVIEK-VISSFDGMKGVRGFHPE 322
L V L+ FD + L+ + G + I K V+ + DG + E
Sbjct: 191 AKTHLFVRKHAPLRSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTL-----E 245
Query: 323 SKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVG--- 379
++ ++ ++ A+ ++ +NL GV +K Y+V ++ T++ I+AVG
Sbjct: 246 LEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGDNT 305
Query: 380 GIVHGKPNNASMAAISARLIIERLYGMQ-DQLMDYSFLPVVVRGDVEFGTVGMSEEAAAK 438
G V P +A + R + ERL+ + D+ +DYS +P VV GTVG++E A +
Sbjct: 306 GAVELTP----VAVAAGRRLSERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTEPQARE 361
Query: 439 VYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKG 498
YG D + +YKSS+ + +KLVC+ E+++GIH IG
Sbjct: 362 QYGDDQVKVYKSSFTAMYTAVTTHRQPCRMKLVCVGSEEKIVGIHGIG------------ 409
Query: 499 GERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535
G + M+ G+++AL+ TK + D T
Sbjct: 410 ---------FGMDE--MLQGFAVALKMGATKKDFDNT 435
>pdb|1GRG|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
Length = 478
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 183/398 (45%), Gaps = 47/398 (11%)
Query: 156 NWNAATKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFT-NPH-TIKLSNRSVTGFNFLL 213
NW + + R L I+I+R AAFT +P TI++S + T + L+
Sbjct: 95 NWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEVSGKKYTAPHILI 154
Query: 214 AVERRCLPE-------PRNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVP 266
A +P P S I++D F+L PG+++++G +AVE+A L+ LG
Sbjct: 155 ATGG--MPSTPHESQIPGASLGITSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGSK 212
Query: 267 VTL-VYSRRLLKHFDQEMVRILLSSLTKAGVSI----QCCVIEKVISSFD--GMKGVRGF 319
+L + ++L+ FD + L AGV + Q ++K +S + + V G
Sbjct: 213 TSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGR 272
Query: 320 HP-ESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAV 378
P + P D + + D L+L+ +G+ K +++ +E T+V I+AV
Sbjct: 273 LPVMTMIPDVDCLLWAIGRVPNTKD---LSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAV 329
Query: 379 GGIVHGKPNNASMAAISARLIIERLYGM-QDQLMDYSFLPVVVRGDVEFGTVGMSEEAAA 437
G + GK +A + R + RL+ +D +DY+ +P VV GTVG++E+ A
Sbjct: 330 GDVC-GKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAI 388
Query: 438 KVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLK 497
YG + + Y +S+ + + + +K+VC E+V+GIH+ G L C +
Sbjct: 389 HKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQG------LGCDE 442
Query: 498 GGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535
M+ G+++A++ TKA+ D T
Sbjct: 443 -----------------MLQGFAVAVKMGATKADFDNT 463
>pdb|1DNC|A Chain A, Human Glutathione Reductase Modified By
Diglutathione-Dinitroso-Iron
Length = 478
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 183/398 (45%), Gaps = 47/398 (11%)
Query: 156 NWNAATKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFT-NPH-TIKLSNRSVTGFNFLL 213
NW + + R L I+I+R AAFT +P TI++S + T + L+
Sbjct: 95 NWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEVSGKKYTAPHILI 154
Query: 214 AVERRCLPE-------PRNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVP 266
A +P P S I++D F+L PG+++++G +AVE+A L+ LG
Sbjct: 155 ATGG--MPSTPHESQIPGASLGITSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGSK 212
Query: 267 VTL-VYSRRLLKHFDQEMVRILLSSLTKAGVSI----QCCVIEKVISSFD--GMKGVRGF 319
+L + ++L+ FD + L AGV + Q ++K +S + + V G
Sbjct: 213 TSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGR 272
Query: 320 HP-ESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAV 378
P + P D + + D L+L+ +G+ K +++ +E T+V I+AV
Sbjct: 273 LPVMTMIPDVDCLLWAIGRVPNTKD---LSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAV 329
Query: 379 GGIVHGKPNNASMAAISARLIIERLYGM-QDQLMDYSFLPVVVRGDVEFGTVGMSEEAAA 437
G + GK +A + R + RL+ +D +DY+ +P VV GTVG++E+ A
Sbjct: 330 GDVC-GKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAI 388
Query: 438 KVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLK 497
YG + + Y +S+ + + + +K+VC E+V+GIH+ G L C +
Sbjct: 389 HKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQG------LGCDE 442
Query: 498 GGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535
M+ G+++A++ TKA+ D T
Sbjct: 443 -----------------MLQGFAVAVKMGATKADFDNT 463
>pdb|3DJG|X Chain X, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
Length = 477
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 183/398 (45%), Gaps = 47/398 (11%)
Query: 156 NWNAATKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFT-NPH-TIKLSNRSVTGFNFLL 213
NW + + R L I+I+R AAFT +P TI++S + T + L+
Sbjct: 94 NWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEVSGKKYTAPHILI 153
Query: 214 AVERRCLPE-------PRNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVP 266
A +P P S I++D F+L PG+++++G +AVE+A L+ LG
Sbjct: 154 ATGG--MPSTPHESQIPGASLGITSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGSK 211
Query: 267 VTL-VYSRRLLKHFDQEMVRILLSSLTKAGVSI----QCCVIEKVISSFD--GMKGVRGF 319
+L + ++L+ FD + L AGV + Q ++K +S + + V G
Sbjct: 212 TSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGR 271
Query: 320 HP-ESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAV 378
P + P D + + D L+L+ +G+ K +++ +E T+V I+AV
Sbjct: 272 LPVMTMIPDVDCLLWAIGRVPNTKD---LSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAV 328
Query: 379 GGIVHGKPNNASMAAISARLIIERLYGM-QDQLMDYSFLPVVVRGDVEFGTVGMSEEAAA 437
G + GK +A + R + RL+ +D +DY+ +P VV GTVG++E+ A
Sbjct: 329 GDVC-GKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAI 387
Query: 438 KVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLK 497
YG + + Y +S+ + + + +K+VC E+V+GIH+ G L C +
Sbjct: 388 HKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQG------LGCDE 441
Query: 498 GGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535
M+ G+++A++ TKA+ D T
Sbjct: 442 -----------------MLQGFAVAVKMGATKADFDNT 462
>pdb|1BWC|A Chain A, Structure Of Human Glutathione Reductase Complexed With
Ajoene Inhibitor And Subversive Substrate
pdb|2GH5|A Chain A, Crystal Structure Of Human Glutathione Reductase Complexed
With A Fluoro-analogue Of The Menadione Derivative M5
pdb|2GH5|B Chain B, Crystal Structure Of Human Glutathione Reductase Complexed
With A Fluoro-analogue Of The Menadione Derivative M5
pdb|1GRA|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRB|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRE|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRF|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|3GRS|A Chain A, Refined Structure Of Glutathione Reductase At 1.54
Angstroms Resolution
pdb|4GR1|A Chain A, The Binding Of The Retro-analogue Of Glutathione Disulfide
To Glutathione Reductase
pdb|3DJJ|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK4|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK8|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK9|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|1GRH|A Chain A, Inhibition Of Human Glutathione Reductase By The
Nitrosourea Drugs 1, 3-Bis(2-Chloroethyl)-1-Nitrosourea
And 1-(2-Chloroethyl)-3-(2- Hydroxyethyl)-1-Nitrosourea
pdb|3SQP|A Chain A, Structure Of Human Glutathione Reductase Complexed With
Pyocyanin, An Agent With Antimalarial Activity
pdb|3SQP|B Chain B, Structure Of Human Glutathione Reductase Complexed With
Pyocyanin, An Agent With Antimalarial Activity
Length = 478
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 183/398 (45%), Gaps = 47/398 (11%)
Query: 156 NWNAATKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFT-NPH-TIKLSNRSVTGFNFLL 213
NW + + R L I+I+R AAFT +P TI++S + T + L+
Sbjct: 95 NWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEVSGKKYTAPHILI 154
Query: 214 AVERRCLPE-------PRNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVP 266
A +P P S I++D F+L PG+++++G +AVE+A L+ LG
Sbjct: 155 ATGG--MPSTPHESQIPGASLGITSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGSK 212
Query: 267 VTL-VYSRRLLKHFDQEMVRILLSSLTKAGVSI----QCCVIEKVISSFD--GMKGVRGF 319
+L + ++L+ FD + L AGV + Q ++K +S + + V G
Sbjct: 213 TSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGR 272
Query: 320 HP-ESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAV 378
P + P D + + D L+L+ +G+ K +++ +E T+V I+AV
Sbjct: 273 LPVMTMIPDVDCLLWAIGRVPNTKD---LSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAV 329
Query: 379 GGIVHGKPNNASMAAISARLIIERLYGM-QDQLMDYSFLPVVVRGDVEFGTVGMSEEAAA 437
G + GK +A + R + RL+ +D +DY+ +P VV GTVG++E+ A
Sbjct: 330 GDVC-GKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAI 388
Query: 438 KVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLK 497
YG + + Y +S+ + + + +K+VC E+V+GIH+ G L C +
Sbjct: 389 HKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQG------LGCDE 442
Query: 498 GGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535
M+ G+++A++ TKA+ D T
Sbjct: 443 -----------------MLQGFAVAVKMGATKADFDNT 463
>pdb|2AAQ|A Chain A, Crystal Structure Analysis Of The Human Glutahione
Reductase, Complexed With Gopi
Length = 479
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 183/398 (45%), Gaps = 47/398 (11%)
Query: 156 NWNAATKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFT-NPH-TIKLSNRSVTGFNFLL 213
NW + + R L I+I+R AAFT +P TI++S + T + L+
Sbjct: 96 NWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEVSGKKYTAPHILI 155
Query: 214 AVERRCLPE-------PRNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVP 266
A +P P S I++D F+L PG+++++G +AVE+A L+ LG
Sbjct: 156 ATGG--MPSTPHESQIPGASLGITSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGSK 213
Query: 267 VTL-VYSRRLLKHFDQEMVRILLSSLTKAGVSI----QCCVIEKVISSFD--GMKGVRGF 319
+L + ++L+ FD + L AGV + Q ++K +S + + V G
Sbjct: 214 TSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGR 273
Query: 320 HP-ESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAV 378
P + P D + + D L+L+ +G+ K +++ +E T+V I+AV
Sbjct: 274 LPVMTMIPDVDCLLWAIGRVPNTKD---LSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAV 330
Query: 379 GGIVHGKPNNASMAAISARLIIERLYGM-QDQLMDYSFLPVVVRGDVEFGTVGMSEEAAA 437
G + GK +A + R + RL+ +D +DY+ +P VV GTVG++E+ A
Sbjct: 331 GDVC-GKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAI 389
Query: 438 KVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLK 497
YG + + Y +S+ + + + +K+VC E+V+GIH+ G L C +
Sbjct: 390 HKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQG------LGCDE 443
Query: 498 GGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535
M+ G+++A++ TKA+ D T
Sbjct: 444 -----------------MLQGFAVAVKMGATKADFDNT 464
>pdb|1XAN|A Chain A, Human Glutathione Reductase In Complex With A Xanthene
Inhibitor
Length = 461
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 183/398 (45%), Gaps = 47/398 (11%)
Query: 156 NWNAATKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFT-NPH-TIKLSNRSVTGFNFLL 213
NW + + R L I+I+R AAFT +P TI++S + T + L+
Sbjct: 78 NWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEVSGKKYTAPHILI 137
Query: 214 AVERRCLPE-------PRNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVP 266
A +P P S I++D F+L PG+++++G +AVE+A L+ LG
Sbjct: 138 ATGG--MPSTPHESQIPGASLGITSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGSK 195
Query: 267 VTL-VYSRRLLKHFDQEMVRILLSSLTKAGVSI----QCCVIEKVISSFD--GMKGVRGF 319
+L + ++L+ FD + L AGV + Q ++K +S + + V G
Sbjct: 196 TSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGR 255
Query: 320 HP-ESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAV 378
P + P D + + D L+L+ +G+ K +++ +E T+V I+AV
Sbjct: 256 LPVMTMIPDVDCLLWAIGRVPNTKD---LSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAV 312
Query: 379 GGIVHGKPNNASMAAISARLIIERLYGM-QDQLMDYSFLPVVVRGDVEFGTVGMSEEAAA 437
G + GK +A + R + RL+ +D +DY+ +P VV GTVG++E+ A
Sbjct: 313 GDVC-GKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAI 371
Query: 438 KVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLK 497
YG + + Y +S+ + + + +K+VC E+V+GIH+ G L C +
Sbjct: 372 HKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQG------LGCDE 425
Query: 498 GGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535
M+ G+++A++ TKA+ D T
Sbjct: 426 -----------------MLQGFAVAVKMGATKADFDNT 446
>pdb|1GRT|A Chain A, Human Glutathione Reductase A34eR37W MUTANT
Length = 478
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 183/398 (45%), Gaps = 47/398 (11%)
Query: 156 NWNAATKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFT-NPH-TIKLSNRSVTGFNFLL 213
NW + + R L I+I+R AAFT +P TI++S + T + L+
Sbjct: 95 NWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEVSGKKYTAPHILI 154
Query: 214 AVERRCLPE-------PRNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVP 266
A +P P S I++D F+L PG+++++G +AVE+A L+ LG
Sbjct: 155 ATGG--MPSTPHESQIPGASLGITSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGSK 212
Query: 267 VTL-VYSRRLLKHFDQEMVRILLSSLTKAGVSI----QCCVIEKVISSFD--GMKGVRGF 319
+L + ++L+ FD + L AGV + Q ++K +S + + V G
Sbjct: 213 TSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGR 272
Query: 320 HP-ESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAV 378
P + P D + + D L+L+ +G+ K +++ +E T+V I+AV
Sbjct: 273 LPVMTMIPDVDCLLWAIGRVPNTKD---LSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAV 329
Query: 379 GGIVHGKPNNASMAAISARLIIERLYGM-QDQLMDYSFLPVVVRGDVEFGTVGMSEEAAA 437
G + GK +A + R + RL+ +D +DY+ +P VV GTVG++E+ A
Sbjct: 330 GDVC-GKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAI 388
Query: 438 KVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLK 497
YG + + Y +S+ + + + +K+VC E+V+GIH+ G L C +
Sbjct: 389 HKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQG------LGCDE 442
Query: 498 GGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535
M+ G+++A++ TKA+ D T
Sbjct: 443 -----------------MLQGFAVAVKMGATKADFDNT 463
>pdb|2GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
Glutathione Complex
pdb|3GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
Trypanothione Complex
pdb|4GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Mixed
Disulfide Between Trypanothione And The Enzyme
pdb|5GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant,
Glutathionylspermidine Complex
Length = 461
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 183/398 (45%), Gaps = 47/398 (11%)
Query: 156 NWNAATKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFT-NPH-TIKLSNRSVTGFNFLL 213
NW + + R L I+I+R AAFT +P TI++S + T + L+
Sbjct: 78 NWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEVSGKKYTAPHILI 137
Query: 214 AVERRCLPE-------PRNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVP 266
A +P P S I++D F+L PG+++++G +AVE+A L+ LG
Sbjct: 138 ATGG--MPSTPHESQIPGASLGITSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGSK 195
Query: 267 VTL-VYSRRLLKHFDQEMVRILLSSLTKAGVSI----QCCVIEKVISSFD--GMKGVRGF 319
+L + ++L+ FD + L AGV + Q ++K +S + + V G
Sbjct: 196 TSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGR 255
Query: 320 HP-ESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAV 378
P + P D + + D L+L+ +G+ K +++ +E T+V I+AV
Sbjct: 256 LPVMTMIPDVDCLLWAIGRVPNTKD---LSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAV 312
Query: 379 GGIVHGKPNNASMAAISARLIIERLYGM-QDQLMDYSFLPVVVRGDVEFGTVGMSEEAAA 437
G + GK +A + R + RL+ +D +DY+ +P VV GTVG++E+ A
Sbjct: 313 GDVC-GKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAI 371
Query: 438 KVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLK 497
YG + + Y +S+ + + + +K+VC E+V+GIH+ G L C +
Sbjct: 372 HKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQG------LGCDE 425
Query: 498 GGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535
M+ G+++A++ TKA+ D T
Sbjct: 426 -----------------MLQGFAVAVKMGATKADFDNT 446
>pdb|1K4Q|A Chain A, Human Glutathione Reductase Inactivated By Peroxynitrite
Length = 463
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 177/370 (47%), Gaps = 47/370 (12%)
Query: 184 IDIVRTAAAFT-NPH-TIKLSNRSVTGFNFLLAVERRCLPE-------PRNSALISADDL 234
I+I+R AAFT +P TI++S + T + L+A +P P S I++D
Sbjct: 108 IEIIRGHAAFTSDPKPTIEVSGKKYTAPHILIATGG--MPSTPHESQIPGASLGITSDGF 165
Query: 235 FRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTL-VYSRRLLKHFDQEMVRILLSSLTK 293
F+L PG+++++G +AVE+A L+ LG +L + ++L+ FD + L
Sbjct: 166 FQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELEN 225
Query: 294 AGVSI----QCCVIEKVISSFD--GMKGVRGFHP-ESKEPFADVFKTVVNAMEKKFDFAA 346
AGV + Q ++K +S + + V G P + P D + + D
Sbjct: 226 AGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKD--- 282
Query: 347 LNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYGM 406
L+L+ +G+ K +++ +E T+V I+AVG + GK +A + R + RL+
Sbjct: 283 LSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVC-GKALLTPVAIAAGRKLAHRLFEY 341
Query: 407 -QDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPE 465
+D +DY+ +P VV GTVG++E+ A YG + + Y +S+ + + +
Sbjct: 342 KEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKRKTK 401
Query: 466 NFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRK 525
+K+VC E+V+GIH+ G L C + M+ G+++A++
Sbjct: 402 CVMKMVCANKEEKVVGIHMQG------LGCDE-----------------MLQGFAVAVKM 438
Query: 526 FLTKAELDGT 535
TKA+ D T
Sbjct: 439 GATKADFDNT 448
>pdb|1GES|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GES|B Chain B, Anatomy Of An Engineered Nad-Binding Site
pdb|1GEU|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GEU|B Chain B, Anatomy Of An Engineered Nad-Binding Site
Length = 450
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 177/397 (44%), Gaps = 42/397 (10%)
Query: 149 ALNVTIRNWNAATKLIKR--FCIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLSNRSV 206
+ TI +N T + R + R L +D+++ A F + T++++ ++
Sbjct: 71 GFDTTINKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEVNGETI 130
Query: 207 TGFNFLLAVE-RRCLPE-PRNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLG 264
T + L+A R P+ P I +D F L A P + V+G + VE+ +N LG
Sbjct: 131 TADHILIATGGRPSHPDIPGVEYGIDSDGFFALPALPERVAVVGAGYIGVELGGVINGLG 190
Query: 265 VPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSIQCCVIEK-VISSFDGMKGVRGFHPE 322
L L FD + L+ + G + I K V+ + DG + E
Sbjct: 191 AKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTL-----E 245
Query: 323 SKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVG--- 379
++ ++ ++ A+ ++ +NL GV +K Y+V ++ T++ I+AVG
Sbjct: 246 LEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGDNT 305
Query: 380 GIVHGKPNNASMAAISARLIIERLYGMQ-DQLMDYSFLPVVVRGDVEFGTVGMSEEAAAK 438
G V P +A + R + ERL+ + D+ +DYS +P VV GTVG++E A +
Sbjct: 306 GAVELTP----VAVAAGRRLSERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTEPQARE 361
Query: 439 VYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKG 498
YG D + +YKSS+ + +KLVC+ E+++GIH IG
Sbjct: 362 QYGDDQVKVYKSSFTAMYTAVTTHRQPCRMKLVCVGSEEKIVGIHGIG------------ 409
Query: 499 GERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535
G+ M+ G+++AL+ TK + D T
Sbjct: 410 ----FGMDE-------MLQGFAVALKMGATKKDFDNT 435
>pdb|1GSN|A Chain A, Human Glutathione Reductase Modified By
Dinitrosoglutathione
Length = 478
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 182/399 (45%), Gaps = 49/399 (12%)
Query: 156 NWNAATKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFT-NPH-TIKLSNRSVTGFNFLL 213
NW + + R L I+I+R AAFT +P TI++S + T + L+
Sbjct: 95 NWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEVSGKKYTAPHILI 154
Query: 214 AVERRCLPE-------PRNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVP 266
A +P P S I++D F+L PG+++++G +AVE+A L+ LG
Sbjct: 155 AT--GGMPSTPHESQIPGASLGITSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGSK 212
Query: 267 VTL-VYSRRLLKHFDQEMVRILLSSLTKAGVSI----QCCVIEKVISSFD--GMKGVRGF 319
+L + ++L+ FD + L AGV + Q ++K +S + + V G
Sbjct: 213 TSLMIRHDKVLRSFDSMISTNXTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGR 272
Query: 320 HP-ESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAV 378
P + P D + + D L+L+ +G+ K +++ +E T+V I+AV
Sbjct: 273 LPVMTMIPDVDXLLWAIGRVPNTKD---LSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAV 329
Query: 379 GGIVHGKPNNASMAAISARLIIERLYGM-QDQLMDYSFLPVVVRGDVEFGTVGMSEEAAA 437
G + GK +A + R + RL+ +D +DY+ +P VV GTVG++E+ A
Sbjct: 330 GDVC-GKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAI 388
Query: 438 KVYGADGLVIYKSSY-PTFDNLLDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCL 496
YG + + Y +S+ P + + K C+ +K+V
Sbjct: 389 HKYGIENVKTYSTSFTPMYHAVTKR-------KTKCV-----------------MKMVXA 424
Query: 497 KGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535
E+V+GIH+ G M+ G+++A++ TKA+ D T
Sbjct: 425 NKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNT 463
>pdb|2R9Z|A Chain A, Glutathione Amide Reductase From Chromatium Gracile
pdb|2R9Z|B Chain B, Glutathione Amide Reductase From Chromatium Gracile
pdb|2RAB|A Chain A, Structure Of Glutathione Amide Reductase From Chromatium
Gracile In Complex With Nad
pdb|2RAB|B Chain B, Structure Of Glutathione Amide Reductase From Chromatium
Gracile In Complex With Nad
Length = 463
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 168/359 (46%), Gaps = 35/359 (9%)
Query: 182 LGIDIVRTAAAFTNPHTIKLSNRSVTGFNFLLAVE-RRCLPE-PRNSALISADDLFRLGA 239
LGI V A F + HTI++ + ++ + ++A R +P P I++D F L
Sbjct: 105 LGITRVDGHARFVDAHTIEVEGQRLSADHIVIATGGRPIVPRLPGAELGITSDGFFALQQ 164
Query: 240 WPGKTLVLGGSLMAVEIAATLNFLGVPVTLV-YSRRLLKHFDQEMVRILLSSLTKAGVSI 298
P + ++G + +E+A L G VT+V RLL FD + L ++ G+
Sbjct: 165 QPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQFDPLLSATLAENMHAQGIET 224
Query: 299 QCCVIEKVISSFDGMKGVRGFHPESKEPFA-DVFKTVVNAMEKKFDFAALNLHHIGVDIK 357
+E +++ + + +G +++ + F +V+ A+ + + L L G++++
Sbjct: 225 H---LEFAVAALE--RDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQ 279
Query: 358 KKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLY-GMQDQLMDYSFL 416
V + T+V ++A+G I G+ +A + R + ERL+ G ++ +DY +
Sbjct: 280 SNGMVPTDAYQNTNVPGVYALGDIT-GRDQLTPVAIAAGRRLAERLFDGQSERKLDYDNI 338
Query: 417 PVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCLKGG 476
P VV VG+SE A + G D L +Y++S+ L+ P+ +KLVC
Sbjct: 339 PTVVFAHPPLSKVGLSEPEARERLG-DVLTVYETSFTPMRYALNEHGPKTAMKLVCAGPE 397
Query: 477 ERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535
+RV+G+HVIG G + M+ G+++A++ TKA+ D T
Sbjct: 398 QRVVGVHVIGD----------GADE-------------MLQGFAVAVKMGATKADFDNT 433
>pdb|4DNA|A Chain A, Crystal Structure Of Putative Glutathione Reductase From
Sinorhizobium Meliloti 1021
pdb|4DNA|B Chain B, Crystal Structure Of Putative Glutathione Reductase From
Sinorhizobium Meliloti 1021
Length = 463
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 144/318 (45%), Gaps = 17/318 (5%)
Query: 179 LKALGIDIVRTAAAFTNPHTIKL--SNRSVTGFNFLLAVERRCLPE---PRNSALISADD 233
L G +I+ T A P+T+KL S ++VT ++AV P P + I++++
Sbjct: 103 LANAGAEILDTRAELAGPNTVKLLASGKTVTAERIVIAVGGHPSPHDALPGHELCITSNE 162
Query: 234 LFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVY-SRRLLKHFDQEMVRILLSSLT 292
F L A P L+ GG +AVE A + LGV TL+Y + +L FDQ+ R L ++
Sbjct: 163 AFDLPALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSRFDQDXRRGLHAAXE 222
Query: 293 KAGVSIQC-CVIEKVISSFDGMK-GVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLH 350
+ G+ I C +I+ V + DG + H E V V A+ + + L L
Sbjct: 223 EKGIRILCEDIIQSVSADADGRRVATTXKHGEI------VADQVXLALGRXPNTNGLGLE 276
Query: 351 HIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYGMQDQL 410
GV + ++ + +TS I+A+G + + +A A IE Y
Sbjct: 277 AAGVRTNELGAIIVDAFSRTSTPGIYALGDVTD-RVQLTPVAIHEAXCFIETEYKNNPTS 335
Query: 411 MDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKL 470
D+ + V E GTVG++EE AA+ + + +Y++ + L + KL
Sbjct: 336 PDHDLIATAVFSQPEIGTVGITEEEAARKF--QEIEVYRAEFRPXKATLSGRKEKTIXKL 393
Query: 471 VCLKGGERVLGIHVIGQN 488
V +V+G H++G +
Sbjct: 394 VVNAADRKVVGAHILGHD 411
>pdb|1ONF|A Chain A, Crystal Structure Of Plasmodium Falciparum Glutathione
Reductase
Length = 500
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 168/376 (44%), Gaps = 70/376 (18%)
Query: 201 LSNRSVTGFNFLLAVERRCLPEPRN--SALISADDLFRLGAWPGKTLVLGGSLMAVEIAA 258
L+ + G N L+AV + + P IS+D+ F + K ++G +AVE+
Sbjct: 135 LNEEILEGRNILIAVGNKPVFPPVKGIENTISSDEFFNIKE-SKKIGIVGSGYIAVELIN 193
Query: 259 TLNFLGVPVTLVYSR--RLLKHFDQEMVRILLSSLTKAGVSI----QCCVIEKVISSFDG 312
+ LG+ + +++R R+L+ FD+ ++ +L + + K ++I I+KV
Sbjct: 194 VIKRLGID-SYIFARGNRILRKFDESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLS 252
Query: 313 MKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSV 372
+ G E F V+ + + D L L + V+ +Y+V +E +TSV
Sbjct: 253 IHLSDGRIYEH-------FDHVIYCVGRSPDTENLKLEKLNVETNN-NYIVVDENQRTSV 304
Query: 373 GNIFAVGGI-----------------------VHGKPN-------NASMAAIS---ARLI 399
NI+AVG ++ K N N + ++ RL+
Sbjct: 305 NNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLL 364
Query: 400 IERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLL 459
+RL+ + + +Y +P V+ GT+G+SEEAA ++YG + + IY+S + +
Sbjct: 365 ADRLFLKKTRKTNYKLIPTVIFSHPPIGTIGLSEEAAIQIYGKENVKIYESKFTNLFFSV 424
Query: 460 DPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGY 519
+ PE + + ++KLVC+ E + G+H+IG N ++ G+
Sbjct: 425 YDIEPE-------------------LKEKTYLKLVCVGKDELIKGLHIIGLNADEIVQGF 465
Query: 520 SLALRKFLTKAELDGT 535
++AL+ TK + D T
Sbjct: 466 AVALKMNATKKDFDET 481
>pdb|2HQM|A Chain A, Crystal Structure Of Glutathione Reductase Glr1 From The
Yeast Saccharomyces Cerevisiae
pdb|2HQM|B Chain B, Crystal Structure Of Glutathione Reductase Glr1 From The
Yeast Saccharomyces Cerevisiae
Length = 479
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 171/395 (43%), Gaps = 49/395 (12%)
Query: 156 NWNAATKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLSNR----SVTGFNF 211
NW + + R + L+ +D+V A F +++ R V N
Sbjct: 92 NWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEVYSANH 151
Query: 212 LLAVE--RRCLPE--PRNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPV 267
+L + PE P +D FRL P K +V+G + +E+A + LG
Sbjct: 152 ILVATGGKAIFPENIPGFELGTDSDGFFRLEEQPKKVVVVGAGYIGIELAGVFHGLGSET 211
Query: 268 TLVY-SRRLLKHFDQEMVRILLSSLTKAGVSI----QCCVIEKVISSFDGMKGVRGFHPE 322
LV +L+ FD+ + + K G+++ + +EK + + D +K H
Sbjct: 212 HLVIRGETVLRKFDECIQNTITDHYVKEGINVHKLSKIVKVEKNVET-DKLK----IHMN 266
Query: 323 SKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIV 382
+ DV + + K + ++G+ + ++ +E T+V NI+++G +V
Sbjct: 267 DSKSIDDVDELIWTIGRK--SHLGMGSENVGIKLNSHDQIIADEYQNTNVPNIYSLGDVV 324
Query: 383 HGKPNNASMAAISARLIIERLYG---MQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKV 439
GK +A + R + RL+G ++ +DY +P V+ E G++G+SE+ A +
Sbjct: 325 -GKVELTPVAIAAGRKLSNRLFGPEKFRNDKLDYENVPSVIFSHPEAGSIGISEKEAIEK 383
Query: 440 YGADGLVIYKSSYPT-FDNLLDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKG 498
YG + + +Y S + + +L P + K+VC E+V+G+H++G ++
Sbjct: 384 YGKENIKVYNSKFTAMYYAMLSEKSPTRY-KIVCAGPNEKVVGLHIVGDSS--------- 433
Query: 499 GERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELD 533
A ++ G+ +A++ TKA+ D
Sbjct: 434 --------------AEILQGFGVAIKMGATKADFD 454
>pdb|3O0H|A Chain A, Crystal Structure Of Glutathione Reductase From Bartonella
Henselae
pdb|3O0H|B Chain B, Crystal Structure Of Glutathione Reductase From Bartonella
Henselae
Length = 484
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 155/338 (45%), Gaps = 30/338 (8%)
Query: 169 IRAKNDSMRELKAL--------GIDIVRTAAAFTNPHTIKLS--NRSVTGFNFLLAVERR 218
+ AKN + L+ L + I + A F + HT++LS ++ L+A +
Sbjct: 106 VAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDEHTLELSVTGERISAEKILIATGAK 165
Query: 219 CLPEPRNSAL------ISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272
+ NSA+ ++++++F L P +++GG + VE A + LGV TL++
Sbjct: 166 IVS---NSAIKGSDLCLTSNEIFDLEKLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHR 222
Query: 273 RRL-LKHFDQEMVRILLSSLTKAGVSIQCCVIEKVISSFDGMKGVRGFHPESKEPF-ADV 330
L L++FD ++ ++L ++ G+SI + E +S + + + AD
Sbjct: 223 GDLILRNFDYDLRQLLNDAMVAKGISI---IYEATVSQVQSTENCYNVVLTNGQTICAD- 278
Query: 331 FKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNAS 390
V+ A + + L L GV + + VV +EK T+V +I+AVG + G
Sbjct: 279 --RVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTTNVSHIWAVGDVT-GHIQLTP 335
Query: 391 MAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKS 450
+A A ++ + DY + V E GTVG+SEE A Y + IY++
Sbjct: 336 VAIHDAMCFVKNAFENTSTTPDYDLITTAVFSQPEIGTVGLSEEDALHRY--KRVEIYRT 393
Query: 451 SYPTFDNLLDPLLPENFVKLVCLKGGERVLGIHVIGQN 488
+ N+L + F+KLV V+G HV+G+N
Sbjct: 394 VFRPMRNVLSGSPEKMFMKLVVDGESRIVVGAHVLGEN 431
>pdb|1EBD|A Chain A, Dihydrolipoamide Dehydrogenase Complexed With The Binding
Domain Of The Dihydrolipoamide Acetylase
pdb|1EBD|B Chain B, Dihydrolipoamide Dehydrogenase Complexed With The Binding
Domain Of The Dihydrolipoamide Acetylase
Length = 455
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 178/404 (44%), Gaps = 50/404 (12%)
Query: 143 EQDSTSALNVTI-----RNWNAATKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFTNPH 197
E+ A NVTI + W A+ ++K+ + LK ++IV+ A F + +
Sbjct: 66 EEMGIKAENVTIDFAKVQEWKAS--VVKKLTGGVEG----LLKGNKVEIVKGEAYFVDAN 119
Query: 198 TIKLSN----RSVTGFNFLLAVERRCLPEPR---NSALISADDLFRLGAWPGKTLVLGGS 250
T+++ N ++ T N ++A R + P ++ ++ + LG P +V+GG
Sbjct: 120 TVRVVNGDSAQTYTFKNAIIATGSRPIELPNFKFSNRILDSTGALNLGEVPKSLVVIGGG 179
Query: 251 LMAVEIAATLNFLGVPVTLVY-SRRLLKHFDQEMVRILLSSLTKAGVSIQCCVIEKVISS 309
+ +E+ G VT++ + +L F+++M I+ L K GV + + K
Sbjct: 180 YIGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNALAKGAEE 239
Query: 310 -FDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKD 368
DG+ + E+K AD V ++ + L L IG+ + + + +++
Sbjct: 240 REDGVTVTYEANGETKTIDADYVLVTVG---RRPNTDELGLEQIGIKMTNRGLIEVDQQC 296
Query: 369 QTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGT 428
+TSV NIFA+G IV G P A A+ ++ E + G +DY +P VV D E +
Sbjct: 297 RTSVPNIFAIGDIVPG-PALAHKASYEGKVAAEAIAG-HPSAVDYVAIPAVVFSDPECAS 354
Query: 429 VGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCLKGGERVLGIHVIGQN 488
VG E+ A +G+ + + +P N R L ++ +
Sbjct: 355 VGYFEQQAKD----EGIDVIAAKFPFAAN-------------------GRALALN--DTD 389
Query: 489 NFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAEL 532
F+KLV K ++G +IG N + MI LA+ +T ++
Sbjct: 390 GFLKLVVRKEDGVIIGAQIIGPNASDMIAELGLAIEAGMTAEDI 433
>pdb|2X50|A Chain A, Crystal Structure Of Trypanothione Reductase From
Leishmania Infantum In Complex With Nadph And Silver
pdb|2X50|B Chain B, Crystal Structure Of Trypanothione Reductase From
Leishmania Infantum In Complex With Nadph And Silver
Length = 510
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 136/294 (46%), Gaps = 18/294 (6%)
Query: 223 PRNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNF---LGVPVTLVYSRRL-LKH 278
P + I++++ F L P + L +GG +AVE A N G V L Y L L+
Sbjct: 190 PGDEFCITSNEAFYLEDAPKRMLCVGGGYIAVEFAGIFNGYKPCGGYVDLCYRGDLILRG 249
Query: 279 FDQEMVRILLSSLTKAGVSIQCCV-IEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNA 337
FD E+ + L L G+ ++ + K+ + DG V F+ ++E + V +
Sbjct: 250 FDTEVRKSLTKQLGANGIRVRTNLNPTKITKNEDGSNHVH-FNDGTEEDYDQVMLAIGRV 308
Query: 338 MEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISAR 397
+ AL L GV K V + +TSV NI+A+G + + + +A
Sbjct: 309 PRSQ----ALQLDKAGVRTGKNGAVQVDAYSKTSVDNIYAIGDVTN-RVMLTPVAINEGA 363
Query: 398 LIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSY-PTFD 456
+E ++G + + D++ + V GT GM+EE AAK Y + + +Y SS+ P
Sbjct: 364 AFVETVFGGKPRATDHTKVACAVFSIPPIGTCGMTEEEAAKNY--ETVAVYASSFTPLMH 421
Query: 457 NLLDPLLPENFVKLVCLKGGERVLGIHVIGQN--NFVKLV--CLKGGERVLGIH 506
N+ E ++++ + VLG+H++G + ++ V C+K G ++ H
Sbjct: 422 NISGSKHKEFMIRIITNESNGEVLGVHMLGDSAPEIIQSVGICMKMGAKISDFH 475
>pdb|2JK6|A Chain A, Structure Of Trypanothione Reductase From Leishmania
Infantum
pdb|2JK6|B Chain B, Structure Of Trypanothione Reductase From Leishmania
Infantum
pdb|2W0H|A Chain A, X Ray Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Antimony And Nadph
pdb|2W0H|B Chain B, X Ray Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Antimony And Nadph
pdb|2YAU|A Chain A, X-Ray Structure Of The Leishmania Infantum Tryopanothione
Reductase In Complex With Auranofin
pdb|2YAU|B Chain B, X-Ray Structure Of The Leishmania Infantum Tryopanothione
Reductase In Complex With Auranofin
pdb|4ADW|A Chain A, Crystal Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Nadph And Trypanothione
pdb|4ADW|B Chain B, Crystal Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Nadph And Trypanothione
Length = 511
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 136/294 (46%), Gaps = 18/294 (6%)
Query: 223 PRNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNF---LGVPVTLVYSRRL-LKH 278
P + I++++ F L P + L +GG +AVE A N G V L Y L L+
Sbjct: 190 PGDEFCITSNEAFYLEDAPKRMLCVGGGYIAVEFAGIFNGYKPCGGYVDLCYRGDLILRG 249
Query: 279 FDQEMVRILLSSLTKAGVSIQCCV-IEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNA 337
FD E+ + L L G+ ++ + K+ + DG V F+ ++E + V +
Sbjct: 250 FDTEVRKSLTKQLGANGIRVRTNLNPTKITKNEDGSNHVH-FNDGTEEDYDQVMLAIGRV 308
Query: 338 MEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISAR 397
+ AL L GV K V + +TSV NI+A+G + + + +A
Sbjct: 309 PRSQ----ALQLDKAGVRTGKNGAVQVDAYSKTSVDNIYAIGDVTN-RVMLTPVAINEGA 363
Query: 398 LIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSY-PTFD 456
+E ++G + + D++ + V GT GM+EE AAK Y + + +Y SS+ P
Sbjct: 364 AFVETVFGGKPRATDHTKVACAVFSIPPIGTCGMTEEEAAKNY--ETVAVYASSFTPLMH 421
Query: 457 NLLDPLLPENFVKLVCLKGGERVLGIHVIGQN--NFVKLV--CLKGGERVLGIH 506
N+ E ++++ + VLG+H++G + ++ V C+K G ++ H
Sbjct: 422 NISGSKHKEFMIRIITNESNGEVLGVHMLGDSAPEIIQSVGICMKMGAKISDFH 475
>pdb|1DXL|A Chain A, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|B Chain B, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|C Chain C, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|D Chain D, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
Length = 470
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 141/315 (44%), Gaps = 20/315 (6%)
Query: 187 VRTAAAFTNPH-----TIKLSNRSVTGFNFLLAV--ERRCLP--EPRNSALISADDLFRL 237
V+ F +P TI+ N V G + ++A + + LP ++S+ L
Sbjct: 114 VKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVKSLPGVTIDEKKIVSSTGALAL 173
Query: 238 GAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLV-YSRRLLKHFDQEMVRILLSSLTKAGV 296
P K +V+G + +E+ + +G VT+V ++ ++ D E+ + SL K G+
Sbjct: 174 SEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGM 233
Query: 297 SIQCCV-IEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVD 355
+ + V +S DG+K ++ + +V+A F + LNL IGV+
Sbjct: 234 KFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFT-SGLNLDKIGVE 292
Query: 356 IKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYGMQDQLMDYSF 415
K ++ NE+ T+V ++A+G ++ G P A A +E L G + DY
Sbjct: 293 TDKLGRILVNERFSTNVSGVYAIGDVIPG-PMLAHKAEEDGVACVEYLAGKVGHV-DYDK 350
Query: 416 LPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLL--PENFVKLVCL 473
+P VV + E +VG +EE + G+ +P N + E VK++
Sbjct: 351 VPGVVYTNPEVASVGKTEEQVKET----GVEYRVGKFPFMANSRAKAIDNAEGLVKIIAE 406
Query: 474 KGGERVLGIHVIGQN 488
K +++LG+H++ N
Sbjct: 407 KETDKILGVHIMAPN 421
>pdb|2WOI|A Chain A, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|B Chain B, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|C Chain C, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|D Chain D, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOV|A Chain A, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|B Chain B, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|C Chain C, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|D Chain D, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOW|A Chain A, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|B Chain B, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|C Chain C, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|D Chain D, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WP5|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP6|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WPC|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPE|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPF|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
Length = 495
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 121/265 (45%), Gaps = 14/265 (5%)
Query: 229 ISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVP---VTLVYSRRL-LKHFDQEMV 284
IS+++ F L P + L +GG ++VE A N P VTL Y L L+ FD+ +
Sbjct: 179 ISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIR 238
Query: 285 RILLSSLTKAGVSIQCCV-IEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFD 343
+ LT G+ I KV + DG K V K DV + + + D
Sbjct: 239 EEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVT--FESGKTLDVDVVMMAIGRIPRTND 296
Query: 344 FAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERL 403
L L ++GV + K V +E +T+V NI+A+G I + +A +++ +
Sbjct: 297 ---LQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDITD-RLMLTPVAINEGAALVDTV 352
Query: 404 YGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSY-PTFDNLLDPL 462
+G + + D++ + V GT G+ EE AAK + + + +Y SS+ P N+
Sbjct: 353 FGNKPRKTDHTRVASAVFSIPPIGTCGLIEEVAAKEF--EKVAVYMSSFTPLMHNISGSK 410
Query: 463 LPENFVKLVCLKGGERVLGIHVIGQ 487
+ K+V VLG+H++G
Sbjct: 411 YKKFVAKIVTNHSDGTVLGVHLLGD 435
>pdb|2WBA|A Chain A, Properties Of Trypanothione Reductase From T. Brucei
pdb|2WBA|B Chain B, Properties Of Trypanothione Reductase From T. Brucei
Length = 492
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 121/265 (45%), Gaps = 14/265 (5%)
Query: 229 ISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVP---VTLVYSRRL-LKHFDQEMV 284
IS+++ F L P + L +GG ++VE A N P VTL Y L L+ FD+ +
Sbjct: 176 ISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIR 235
Query: 285 RILLSSLTKAGVSIQCCV-IEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFD 343
+ LT G+ I KV + DG K V K DV + + + D
Sbjct: 236 EEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVT--FESGKTLDVDVVMMAIGRIPRTND 293
Query: 344 FAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERL 403
L L ++GV + K V +E +T+V NI+A+G I + +A +++ +
Sbjct: 294 ---LQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDITD-RLMLTPVAINEGAALVDTV 349
Query: 404 YGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSY-PTFDNLLDPL 462
+G + + D++ + V GT G+ EE AAK + + + +Y SS+ P N+
Sbjct: 350 FGNKPRKTDHTRVASAVFSIPPIGTCGLIEEVAAKEF--EKVAVYMSSFTPLMHNISGSK 407
Query: 463 LPENFVKLVCLKGGERVLGIHVIGQ 487
+ K+V VLG+H++G
Sbjct: 408 YKKFVAKIVTNHSDGTVLGVHLLGD 432
>pdb|2TPR|A Chain A, X-ray Structure Of Trypanothione Reductase From Crithidia
Fasciculata At 2.4 Angstroms Resolution
pdb|2TPR|B Chain B, X-ray Structure Of Trypanothione Reductase From Crithidia
Fasciculata At 2.4 Angstroms Resolution
Length = 490
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 131/294 (44%), Gaps = 24/294 (8%)
Query: 229 ISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFL---GVPVTLVY-SRRLLKHFDQEMV 284
I++++ F L P + L +GG +++E A N G V L Y +L+ FD E+
Sbjct: 175 ITSNEAFYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELR 234
Query: 285 RILLSSLTKAGVSIQCCV-IEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFD 343
+ L L G++++ KV + DG + V E DV + + +
Sbjct: 235 KQLTEQLRANGINVRTHENPAKVTKNADGTRHV--VFESGAEADYDVVMLAIGRVPRS-- 290
Query: 344 FAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERL 403
L L GV++ K + + +T+V NI+A+G + + +A ++ +
Sbjct: 291 -QTLQLEKAGVEVAKNGAIKVDAYSKTNVDNIYAIGDVTD-RVMLTPVAINEGAAFVDTV 348
Query: 404 YGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSY-PTFDNLLDPL 462
+ + + D++ + V G G EE AAK Y D + +Y+SS+ P N+
Sbjct: 349 FANKPRATDHTKVACAVFSIPPMGVCGYVEEDAAKKY--DQVAVYESSFTPLMHNISGST 406
Query: 463 LPENFVKLVCLKGGERVLGIHVIGQNNFVKL----VCLKGGERV------LGIH 506
+ V++V VLG+H++G ++ + +CLK G ++ +G+H
Sbjct: 407 YKKFMVRIVTNHADGEVLGVHMLGDSSPEIIQSVAICLKMGAKISDVYNTIGVH 460
>pdb|1FEA|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|C Chain C, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|D Chain D, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEB|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.0 Angstrom Resolution
pdb|1FEB|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.0 Angstrom Resolution
pdb|1FEC|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 1.7 Angstrom Resolution
pdb|1FEC|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 1.7 Angstrom Resolution
Length = 490
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 131/294 (44%), Gaps = 24/294 (8%)
Query: 229 ISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFL---GVPVTLVY-SRRLLKHFDQEMV 284
I++++ F L P + L +GG +++E A N G V L Y +L+ FD E+
Sbjct: 175 ITSNEAFYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELR 234
Query: 285 RILLSSLTKAGVSIQCCV-IEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFD 343
+ L L G++++ KV + DG + V E DV + + +
Sbjct: 235 KQLTEQLRANGINVRTHENPAKVTKNADGTRHV--VFESGAEADYDVVMLAIGRVPRS-- 290
Query: 344 FAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERL 403
L L GV++ K + + +T+V NI+A+G + + +A ++ +
Sbjct: 291 -QTLQLEKAGVEVAKNGAIKVDAYSKTNVDNIYAIGDVTD-RVMLTPVAINEGAAFVDTV 348
Query: 404 YGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSY-PTFDNLLDPL 462
+ + + D++ + V G G EE AAK Y D + +Y+SS+ P N+
Sbjct: 349 FANKPRATDHTKVACAVFSIPPMGVCGYVEEDAAKKY--DQVAVYESSFTPLMHNISGST 406
Query: 463 LPENFVKLVCLKGGERVLGIHVIGQNNFVKL----VCLKGGERV------LGIH 506
+ V++V VLG+H++G ++ + +CLK G ++ +G+H
Sbjct: 407 YKKFMVRIVTNHADGEVLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNTIGVH 460
>pdb|1TYT|A Chain A, Crystal And Molecular Structure Of Crithidia Fasciculata
Trypanothione Reductase At 2.6 Angstroms Resolution
pdb|1TYT|B Chain B, Crystal And Molecular Structure Of Crithidia Fasciculata
Trypanothione Reductase At 2.6 Angstroms Resolution
Length = 487
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 131/294 (44%), Gaps = 24/294 (8%)
Query: 229 ISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFL---GVPVTLVY-SRRLLKHFDQEMV 284
I++++ F L P + L +GG +++E A N G V L Y +L+ FD E+
Sbjct: 176 ITSNEAFYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELR 235
Query: 285 RILLSSLTKAGVSIQCCV-IEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFD 343
+ L L G++++ KV + DG + V E DV + + +
Sbjct: 236 KQLTEQLRANGINVRTHENPAKVTKNADGTRHV--VFESGAEADYDVVMLAIGRVPRS-- 291
Query: 344 FAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERL 403
L L GV++ K + + +T+V NI+A+G + + +A ++ +
Sbjct: 292 -QTLQLDKAGVEVAKNGAIKVDAYSKTNVDNIYAIGDVTD-RVMLTPVAINEGAAFVDTV 349
Query: 404 YGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSY-PTFDNLLDPL 462
+ + + D++ + V G G EE AAK Y D + +Y+SS+ P N+
Sbjct: 350 FANKPRATDHTKVACAVFSIPPMGVCGYVEEDAAKKY--DQVAVYESSFTPLMHNISGST 407
Query: 463 LPENFVKLVCLKGGERVLGIHVIGQNNFVKL----VCLKGGERV------LGIH 506
+ V++V VLG+H++G ++ + +CLK G ++ +G+H
Sbjct: 408 YKKFMVRIVTNHADGEVLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNTIGVH 461
>pdb|1TYP|A Chain A, Substrate Interactions Between Trypanothione Reductase And
N1-Glutathionylspermidine Disulphide At 0.28-Nm
Resolution
pdb|1TYP|B Chain B, Substrate Interactions Between Trypanothione Reductase And
N1-Glutathionylspermidine Disulphide At 0.28-Nm
Resolution
Length = 487
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 131/294 (44%), Gaps = 24/294 (8%)
Query: 229 ISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFL---GVPVTLVY-SRRLLKHFDQEMV 284
I++++ F L P + L +GG +++E A N G V L Y +L+ FD E+
Sbjct: 176 ITSNEAFYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELR 235
Query: 285 RILLSSLTKAGVSIQCCV-IEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFD 343
+ L L G++++ KV + DG + V E DV + + +
Sbjct: 236 KQLTEQLRANGINVRTHENPAKVTKNADGTRHV--VFESGAEADYDVVMLAIGRVPRS-- 291
Query: 344 FAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERL 403
L L GV++ K + + +T+V NI+A+G + + +A ++ +
Sbjct: 292 -QTLQLDKAGVEVAKNGAIKVDAYSKTNVDNIYAIGDVTD-RVMLTPVAINEGAAFVDTV 349
Query: 404 YGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSY-PTFDNLLDPL 462
+ + + D++ + V G G EE AAK Y D + +Y+SS+ P N+
Sbjct: 350 FANKPRATDHTKVACAVFSIPPMGVCGYVEEDAAKKY--DQVAVYESSFTPLMHNISGST 407
Query: 463 LPENFVKLVCLKGGERVLGIHVIGQNNFVKL----VCLKGGERV------LGIH 506
+ V++V VLG+H++G ++ + +CLK G ++ +G+H
Sbjct: 408 YKKFMVRIVTNHADGEVLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNTIGVH 461
>pdb|1LPF|A Chain A, Three-Dimensional Structure Of Lipoamide Dehydrogenase
From Pseudomonas Fluorescens At 2.8 Angstroms
Resolution. Analysis Of Redox And Thermostability
Properties
pdb|1LPF|B Chain B, Three-Dimensional Structure Of Lipoamide Dehydrogenase
From Pseudomonas Fluorescens At 2.8 Angstroms
Resolution. Analysis Of Redox And Thermostability
Properties
Length = 477
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 132/284 (46%), Gaps = 15/284 (5%)
Query: 210 NFLLAVERRCL---PEP-RNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGV 265
N ++A R + P P + ++ + A P K V+G ++ +E+ + LG
Sbjct: 145 NVIIASGSRPVEIPPAPLSDDIIVDSTGALEFQAVPKKLGVIGAGVIGLELGSVWARLGA 204
Query: 266 PVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSIQCCVIEKVISSFDGMKGVRGFHPESK 324
VT++ + + L D+++ + L LTK G++I+ +V +S K V ++
Sbjct: 205 EVTVLEALDKFLPAADEQIAKEALKVLTKQGLNIRLGA--RVTASEVKKKQVTVTFTDAN 262
Query: 325 EPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHG 384
+ F ++ A+ ++ L GV + ++ ++ ++ +TSV +FA+G +V G
Sbjct: 263 GEQKETFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDHCKTSVPGVFAIGDVVRG 322
Query: 385 KPNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADG 444
A A+ ++ ER+ G + Q M+Y +P V+ E VG +E+ A+G
Sbjct: 323 -AMLAHKASEEGVMVAERIAGHKAQ-MNYDLIPSVIYTHPEIAWVGKTEQ----TLKAEG 376
Query: 445 LVIYKSSYP--TFDNLLDPLLPENFVKLVCLKGGERVLGIHVIG 486
+ + ++P + VK++ +RVLG+HVIG
Sbjct: 377 VEVNVGTFPFAASGRAMAANDTTGLVKVIADAKTDRVLGVHVIG 420
>pdb|1NDA|A Chain A, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|B Chain B, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|C Chain C, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|D Chain D, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
Length = 491
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 130/307 (42%), Gaps = 48/307 (15%)
Query: 229 ISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVP---VTLVY-SRRLLKHFDQEMV 284
IS+++ F L P + L +GG ++VE A N VTL Y +L+ FD +
Sbjct: 176 ISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEMILRGFDHTLR 235
Query: 285 RILLSSLTKAGVSIQCCVIE---KVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKK 341
L LT G IQ E KV + DG K V F K F V + + K
Sbjct: 236 EELTKQLTANG--IQILTKENPAKVELNADGSKSVT-FESGKKMDFDLVMMAIGRSPRTK 292
Query: 342 FDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIE 401
L L + GV IK V +E +T+V NI+A+G + + + +A A +++
Sbjct: 293 ----DLQLQNAGVMIKNGG-VQVDEYSRTNVSNIYAIGDVTN-RVMLTPVAINEAAALVD 346
Query: 402 RLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDP 461
++G + D++ + V GT G+ EE A+K Y + + +Y SS+ P
Sbjct: 347 TVFGTNPRKTDHTRVASAVFSIPPIGTCGLIEEVASKRY--EVVAVYLSSF-------TP 397
Query: 462 LLPENFVKLVCLKGGERVLGIHVIGQNNF----VKLVCLKGGERVLGIHVIGQNVAGMIF 517
L+ H I + + K++ VLG+H++G N +I
Sbjct: 398 LM-------------------HNISGSKYKTFVAKIITNHSDGTVLGVHLLGDNAPEIIQ 438
Query: 518 GYSLALR 524
G + L+
Sbjct: 439 GVGICLK 445
>pdb|1AOG|A Chain A, Trypanosoma Cruzi Trypanothione Reductase (Oxidized Form)
pdb|1AOG|B Chain B, Trypanosoma Cruzi Trypanothione Reductase (Oxidized Form)
Length = 485
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 128/303 (42%), Gaps = 40/303 (13%)
Query: 229 ISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVP---VTLVY-SRRLLKHFDQEMV 284
IS+++ F L P + L +GG ++VE A N VTL Y +L+ FD +
Sbjct: 175 ISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEMILRGFDHTLR 234
Query: 285 RILLSSLTKAGVSIQCCVIE---KVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKK 341
L LT G IQ E KV + DG K V F K F V + + K
Sbjct: 235 EELTKQLTANG--IQILTKENPAKVELNADGSKSVT-FESGKKMDFDLVMMAIGRSPRTK 291
Query: 342 FDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIE 401
L L + GV IK V +E +T+V NI+A+G + + + +A A +++
Sbjct: 292 ----DLQLQNAGVMIKNGG-VQVDEYSRTNVSNIYAIGDVTN-RVMLTPVAINEAAALVD 345
Query: 402 RLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDP 461
++G + D++ + V GT G+ EE A+K Y + + +Y SS F L+
Sbjct: 346 TVFGTTPRKTDHTRVASAVFSIPPIGTCGLIEEVASKRY--EVVAVYLSS---FTPLMHK 400
Query: 462 LLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSL 521
+ + V K++ VLG+H++G N +I G +
Sbjct: 401 VSGSKYKTFVA-------------------KIITNHSDGTVLGVHLLGDNAPEIIQGIGI 441
Query: 522 ALR 524
L+
Sbjct: 442 CLK 444
>pdb|1GXF|A Chain A, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With The Inhibitor Quinacrine
Mustard
pdb|1GXF|B Chain B, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With The Inhibitor Quinacrine
Mustard
Length = 492
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 128/303 (42%), Gaps = 40/303 (13%)
Query: 229 ISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVP---VTLVY-SRRLLKHFDQEMV 284
IS+++ F L P + L +GG ++VE A N VTL Y +L+ FD +
Sbjct: 177 ISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEMILRGFDHTLR 236
Query: 285 RILLSSLTKAGVSIQCCVIE---KVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKK 341
L LT G IQ E KV + DG K V F K F V + + K
Sbjct: 237 EELTKQLTANG--IQILTKENPAKVELNADGSKSVT-FESGKKMDFDLVMMAIGRSPRTK 293
Query: 342 FDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIE 401
L L + GV IK V +E +T+V NI+A+G + + + +A A +++
Sbjct: 294 ----DLQLQNAGVMIKNGG-VQVDEYSRTNVSNIYAIGDVTN-RVMLTPVAINEAAALVD 347
Query: 402 RLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDP 461
++G + D++ + V GT G+ EE A+K Y + + +Y SS F L+
Sbjct: 348 TVFGTTPRKTDHTRVASAVFSIPPIGTCGLIEEVASKRY--EVVAVYLSS---FTPLMHK 402
Query: 462 LLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSL 521
+ + V K++ VLG+H++G N +I G +
Sbjct: 403 VSGSKYKTFVA-------------------KIITNHSDGTVLGVHLLGDNAPEIIQGIGI 443
Query: 522 ALR 524
L+
Sbjct: 444 CLK 446
>pdb|1BZL|A Chain A, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With Trypanothione, And The
Structure- Based Discovery Of New Natural Product
Inhibitors
pdb|1BZL|B Chain B, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With Trypanothione, And The
Structure- Based Discovery Of New Natural Product
Inhibitors
Length = 486
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 128/303 (42%), Gaps = 40/303 (13%)
Query: 229 ISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVP---VTLVY-SRRLLKHFDQEMV 284
IS+++ F L P + L +GG ++VE A N VTL Y +L+ FD +
Sbjct: 176 ISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEMILRGFDHTLR 235
Query: 285 RILLSSLTKAGVSIQCCVIE---KVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKK 341
L LT G IQ E KV + DG K V F K F V + + K
Sbjct: 236 EELTKQLTANG--IQILTKENPAKVELNADGSKSVT-FESGKKMDFDLVMMAIGRSPRTK 292
Query: 342 FDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIE 401
L L + GV IK V +E +T+V NI+A+G + + + +A A +++
Sbjct: 293 ----DLQLQNAGVMIKNGG-VQVDEYSRTNVSNIYAIGDVTN-RVMLTPVAINEAAALVD 346
Query: 402 RLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDP 461
++G + D++ + V GT G+ EE A+K Y + + +Y SS F L+
Sbjct: 347 TVFGTTPRKTDHTRVASAVFSIPPIGTCGLIEEVASKRY--EVVAVYLSS---FTPLMHK 401
Query: 462 LLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSL 521
+ + V K++ VLG+H++G N +I G +
Sbjct: 402 VSGSKYKTFVA-------------------KIITNHSDGTVLGVHLLGDNAPEIIQGIGI 442
Query: 522 ALR 524
L+
Sbjct: 443 CLK 445
>pdb|3LAD|A Chain A, Refined Crystal Structure Of Lipoamide Dehydrogenase From
Azotobacter Vinelandii At 2.2 Angstroms Resolution. A
Comparison With The Structure Of Glutathione Reductase
pdb|3LAD|B Chain B, Refined Crystal Structure Of Lipoamide Dehydrogenase From
Azotobacter Vinelandii At 2.2 Angstroms Resolution. A
Comparison With The Structure Of Glutathione Reductase
Length = 476
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 117/249 (46%), Gaps = 11/249 (4%)
Query: 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYSR-RLLKHFDQEMVRILLSSLTKAGVSIQ 299
PGK V+G ++ +E+ + LG VT++ + + L D+++ + LTK G+ I
Sbjct: 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKIL 239
Query: 300 CCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKK 359
+V + K V +++ + F ++ A+ ++ L GV + ++
Sbjct: 240 LGA--RVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDER 297
Query: 360 SYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYGMQDQLMDYSFLPVV 419
++ ++ TSV ++A+G +V G A A+ ++ ER+ G + Q M+Y +P V
Sbjct: 298 GFIYVDDYCATSVPGVYAIGDVVRGA-MLAHKASEEGVVVAERIAGHKAQ-MNYDLIPAV 355
Query: 420 VRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYP--TFDNLLDPLLPENFVKLVCLKGGE 477
+ E VG +E+A A+G+ I +P + FVK++ +
Sbjct: 356 IYTHPEIAGVGKTEQA----LKAEGVAINVGVFPFAASGRAMAANDTAGFVKVIADAKTD 411
Query: 478 RVLGIHVIG 486
RVLG+HVIG
Sbjct: 412 RVLGVHVIG 420
>pdb|2EQ7|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdo
pdb|2EQ7|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdo
pdb|2YQU|A Chain A, Crystal Structures And Evolutionary Relationship Of Two
Different Lipoamide Dehydrogenase(e3s) From Thermus
Thermophilus
pdb|2YQU|B Chain B, Crystal Structures And Evolutionary Relationship Of Two
Different Lipoamide Dehydrogenase(e3s) From Thermus
Thermophilus
Length = 455
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 124/287 (43%), Gaps = 39/287 (13%)
Query: 241 PGKTLVLGGSLMAVEIAATLNFLGVPV-TLVYSRRLLKHFDQEMVRILLSSLTKAGVSIQ 299
P + +V+GG ++ +E+ + LG V L Y R+L D E+ R K G++I+
Sbjct: 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIR 226
Query: 300 CCVIEKVISSFDGMKGVRGFHPESKEPF-ADVFKTVVNAMEKKFDFAALNLHHIGVDIKK 358
V +V + KG R E E AD V+ A+ ++ L+L + G+ +
Sbjct: 227 TGV--RVTAVVPEAKGAR-VELEGGEVLEAD---RVLVAVGRRPYTEGLSLENAGLSTDE 280
Query: 359 KSYVVCNEKDQTSVGNIFAVGGIVHGK--PNNASMAAISARLIIERLYGMQDQLMDYSFL 416
+ + +E +T V +I+A+G +V G + AS I+A + R +G +DY +
Sbjct: 281 RGRIPVDEHLRTRVPHIYAIGDVVRGPMLAHKASEEGIAAVEHMVRGFGH----VDYQAI 336
Query: 417 PVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCLKGG 476
P VV E VG +EE A G+ +P G
Sbjct: 337 PSVVYTHPEIAAVGYTEEE----LKAQGIPYKVGKFP-----------------YSASGR 375
Query: 477 ERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLAL 523
R +G F+K++ +R+LG+H IG V ++ +LAL
Sbjct: 376 ARAMG----ETEGFIKVLAHAKTDRILGVHGIGARVGDVLAEAALAL 418
>pdb|3URH|A Chain A, Crystal Structure Of A Dihydrolipoamide Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3URH|B Chain B, Crystal Structure Of A Dihydrolipoamide Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 491
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 105/239 (43%), Gaps = 15/239 (6%)
Query: 254 VEIAATLNFLGVPVTLV-YSRRLLKHFDQEMVRILLSSLTKAGVSIQCCV-IEKVISSFD 311
+E+ + LG VT+V + +L D E+ + L LTK G+ + + + S D
Sbjct: 211 LELGSVWARLGAKVTVVEFLDTILGGXDGEVAKQLQRXLTKQGIDFKLGAKVTGAVKSGD 270
Query: 312 GMKGVRGFHP-ESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQT 370
G K F P + E + V+ A +K L L GV + + V + QT
Sbjct: 271 GAKVT--FEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRHFQT 328
Query: 371 SVGNIFAVGGIVHGKPNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVG 430
S+ ++A+G +V G P A A + E + G Q ++Y +P VV E +VG
Sbjct: 329 SIAGVYAIGDVVRG-PXLAHKAEDEGVAVAEIIAG-QAGHVNYDVIPGVVYTQPEVASVG 386
Query: 431 MSEE---AAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCLKGGERVLGIHVIG 486
+EE AA Y I K + L + FVK++ K +RVLG H+IG
Sbjct: 387 KTEEELKAAGVAY-----KIGKFPFTANGRARAXLQTDGFVKILADKETDRVLGGHIIG 440
>pdb|1ZK7|A Chain A, Crystal Structure Of Tn501 Mera
pdb|1ZX9|A Chain A, Crystal Structure Of Tn501 Mera
Length = 467
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 128/313 (40%), Gaps = 33/313 (10%)
Query: 220 LPEPRNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYSRRLLKHF 279
+P + S ++ + P + V+G S++A+E+A LG VT++ L
Sbjct: 155 IPGLKESPYWTSTEALASDTIPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFRE 214
Query: 280 DQEMVRILLSSLTKAGVSIQCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAME 339
D + + ++ G+ + ++ DG + H E + AD ++ A
Sbjct: 215 DPAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTTHGELR---AD---KLLVATG 268
Query: 340 KKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLI 399
+ + +L L GV + + +V ++ +TS NI+A G +P +AA +
Sbjct: 269 RTPNTRSLALDAAGVTVNAQGAIVIDQGMRTSNPNIYAAGDCTD-QPQFVYVAAAAGTRA 327
Query: 400 IERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLL 459
+ G D +D + +P VV D + TVG SE A DG+ S T DN+
Sbjct: 328 AINMTG-GDAALDLTAMPAVVFTDPQVATVGYSEAEAHH----DGIET-DSRTLTLDNV- 380
Query: 460 DPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGY 519
P NF F+KLV +G R++G+ + +I
Sbjct: 381 -PRALANF------------------DTRGFIKLVIEEGSHRLIGVQAVAPEAGELIQTA 421
Query: 520 SLALRKFLTKAEL 532
+LA+R +T EL
Sbjct: 422 ALAIRNRMTVQEL 434
>pdb|2EQ6|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8
pdb|2EQ6|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8
pdb|2EQ8|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|D Chain D, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|E Chain E, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ9|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|D Chain D, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|E Chain E, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|G Chain G, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|H Chain H, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|J Chain J, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|K Chain K, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
Length = 464
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 147/363 (40%), Gaps = 41/363 (11%)
Query: 179 LKALGIDIVRTAAAFTNPHTIKLSNRSVTGFNFLLA-----VERRCLPEPRNSALISADD 233
LK G++++R A P +++ + +LA +E + P + S
Sbjct: 103 LKGNGVELLRGFARLVGPKEVEVGGERYGAKSLILATGSEPLELKGFPFGED-VWDSTRA 161
Query: 234 LFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLV-YSRRLLKHFDQEMVRILLSSLT 292
L P + LV+GG + +E+ LG VTL+ Y +L D E +L +L
Sbjct: 162 LKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALE 221
Query: 293 KAGVSIQCCVIEKVIS---SFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNL 349
K G+ ++ K + DG+ VR E E V V+ A+ +K L L
Sbjct: 222 KEGIRVRTKT--KAVGYEKKKDGLH-VRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGL 278
Query: 350 HHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYGMQDQ 409
GV + ++ ++ N + +TSV ++A+G +P + A+ LI +D
Sbjct: 279 EKAGVKVDERGFIRVNARMETSVPGVYAIGDAA--RPPLLAHKAMREGLIAAENAAGKDS 336
Query: 410 LMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVK 469
DY +P VV E+ VG++EE A + G + +P
Sbjct: 337 AFDYQ-VPSVVYTSPEWAGVGLTEEEAKRA----GYKVKVGKFP---------------- 375
Query: 470 LVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTK 529
+ G LG G VK+V + + +LG+ ++G +I +LAL T
Sbjct: 376 -LAASGRALTLG----GAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATL 430
Query: 530 AEL 532
+L
Sbjct: 431 TDL 433
>pdb|3RNM|A Chain A, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|B Chain B, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|C Chain C, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|D Chain D, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
Length = 495
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 115/289 (39%), Gaps = 21/289 (7%)
Query: 210 NFLLAVERRCLPEP----RNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGV 265
N L+A P P ++S+ L P K +V+G ++ VE+ + LG
Sbjct: 164 NILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGA 223
Query: 266 PVTLVYSRRLLKH-----FDQEMVRILLSSLTKAGVSIQCCV-IEKVISSFDGMKGVRGF 319
VT V L H D E+ + L K G + + DG V
Sbjct: 224 DVTAV---EFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIE 280
Query: 320 HPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVG 379
+ ++ + ++ L L +G+++ + + N + QT + NI+A+G
Sbjct: 281 AASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIG 340
Query: 380 GIVHGKPNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKV 439
+V G P A A + +E + G + DY+ +P V+ E VG SEE +
Sbjct: 341 DVVAG-PMLAHKAEDEGIICVEGMAGGAVHI-DYNCVPSVIYTHPEVAWVGKSEEQLKE- 397
Query: 440 YGADGLVIYKSSYPTFDN--LLDPLLPENFVKLVCLKGGERVLGIHVIG 486
+G+ +P N + VK++ K +RVLG H++G
Sbjct: 398 ---EGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILG 443
>pdb|1ZMC|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMD|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|2F5Z|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|I Chain I, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|J Chain J, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
Length = 474
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 115/289 (39%), Gaps = 21/289 (7%)
Query: 210 NFLLAVERRCLPEP----RNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGV 265
N L+A P P ++S+ L P K +V+G ++ VE+ + LG
Sbjct: 143 NILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGA 202
Query: 266 PVTLVYSRRLLKH-----FDQEMVRILLSSLTKAGVSIQCCV-IEKVISSFDGMKGVRGF 319
VT V L H D E+ + L K G + + DG V
Sbjct: 203 DVTAV---EFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIE 259
Query: 320 HPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVG 379
+ ++ + ++ L L +G+++ + + N + QT + NI+A+G
Sbjct: 260 AASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIG 319
Query: 380 GIVHGKPNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKV 439
+V G P A A + +E + G + DY+ +P V+ E VG SEE +
Sbjct: 320 DVVAG-PMLAHKAEDEGIICVEGMAGGAVHI-DYNCVPSVIYTHPEVAWVGKSEEQLKE- 376
Query: 440 YGADGLVIYKSSYPTFDN--LLDPLLPENFVKLVCLKGGERVLGIHVIG 486
+G+ +P N + VK++ K +RVLG H++G
Sbjct: 377 ---EGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILG 422
>pdb|1ZY8|A Chain A, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|B Chain B, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|C Chain C, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|D Chain D, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|E Chain E, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|F Chain F, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|G Chain G, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|H Chain H, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|I Chain I, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|J Chain J, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex
Length = 474
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 115/289 (39%), Gaps = 21/289 (7%)
Query: 210 NFLLAVERRCLPEP----RNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGV 265
N L+A P P ++S+ L P K +V+G ++ VE+ + LG
Sbjct: 143 NILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGA 202
Query: 266 PVTLVYSRRLLKH-----FDQEMVRILLSSLTKAGVSIQCCV-IEKVISSFDGMKGVRGF 319
VT V L H D E+ + L K G + + DG V
Sbjct: 203 DVTAV---EFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIE 259
Query: 320 HPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVG 379
+ ++ + ++ L L +G+++ + + N + QT + NI+A+G
Sbjct: 260 AASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIG 319
Query: 380 GIVHGKPNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKV 439
+V G P A A + +E + G + DY+ +P V+ E VG SEE +
Sbjct: 320 DVVAG-PMLAHKAEDEGIICVEGMAGGAVHI-DYNCVPSVIYTHPEVAWVGKSEEQLKE- 376
Query: 440 YGADGLVIYKSSYPTFDN--LLDPLLPENFVKLVCLKGGERVLGIHVIG 486
+G+ +P N + VK++ K +RVLG H++G
Sbjct: 377 ---EGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILG 422
>pdb|1LVL|A Chain A, The Refined Structure Of Pseudomonas Putida Lipoamide
Dehydrogenase Complexed With Nad+ At 2.45 Angstroms
Resolution
Length = 458
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 135/324 (41%), Gaps = 38/324 (11%)
Query: 179 LKALGIDIVRTAAAFTNPHTIKLSNRSVTGFNFLLAVERRC--LPE-PRNSALISADDLF 235
LK G+ +V A + +++ + + + LLA LP P +IS+ +
Sbjct: 106 LKKHGVKVVHGWAKVLDGKQVEVDGQRIQCEHLLLATGSSSVELPMLPLGGPVISSTEAL 165
Query: 236 RLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYSR-RLLKHFDQEMVRILLSSLTKA 294
A P +V+GG + +E+ LG V++V +R R+L +D E+ + SL K
Sbjct: 166 APKALPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPTYDSELTAPVAESLKKL 225
Query: 295 GVSIQC----------CVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDF 344
G+++ C++ DG G E+ V + K F+
Sbjct: 226 GIALHLGHSVEGYENGCLLAN-----DGKGGQ--LRLEADRVLVAVGR---RPRTKGFNL 275
Query: 345 AALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLY 404
L+L G + + +E+ QTS+ N++A+G + G+P A A ++ E +
Sbjct: 276 ECLDLKMNG------AAIAIDERCQTSMHNVWAIGDVA-GEPMLAHRAMAQGEMVAEIIA 328
Query: 405 GMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDN--LLDPL 462
G + + + + + V D E VG + E A++ GL + +P N +
Sbjct: 329 G-KARRFEPAAIAAVCFTDPEVVVVGKTPEQASQ----QGLDCIVAQFPFAANGRAMSLE 383
Query: 463 LPENFVKLVCLKGGERVLGIHVIG 486
FV++V + +LG +G
Sbjct: 384 SKSGFVRVVARRDNHLILGWQAVG 407
>pdb|2QAE|A Chain A, Crystal Structure Analysis Of Trypanosoma Cruzi Lipoamide
Dehydrogenase
pdb|2QAE|B Chain B, Crystal Structure Analysis Of Trypanosoma Cruzi Lipoamide
Dehydrogenase
Length = 468
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 122/301 (40%), Gaps = 33/301 (10%)
Query: 228 LISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLV-YSRRLLKHFDQEMVRI 286
++S+ L P +V+GG ++ +E+ + LG VT+V ++ R D+++
Sbjct: 161 VLSSTGALALPRVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPTLDEDVTNA 220
Query: 287 LLSSLTKAGVSIQCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKT---VVNAMEKKFD 343
L+ +L K ++ KV+ + V E K + +V+ + F
Sbjct: 221 LVGALAK-NEKMKFMTSTKVVGGTNNGDSVS-LEVEGKNGKRETVTCEALLVSVGRRPFT 278
Query: 344 FAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERL 403
L L I V ++ +V + +TS+ +++A+G +V P A A E L
Sbjct: 279 -GGLGLDKINVAKNERGFVKIGDHFETSIPDVYAIGDVVDKGPMLAHKAEDEGVACAEIL 337
Query: 404 YGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLL 463
G + +Y +P V+ E +VG SE+ K +G+ +P N
Sbjct: 338 AGKPGHV-NYGVIPAVIYTMPEVASVGKSEDELKK----EGVAYKVGKFPFNAN------ 386
Query: 464 PENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLAL 523
R + ++ FVK++ K +R+LG+H++ +I LA+
Sbjct: 387 -------------SRAKAVST--EDGFVKVLVDKATDRILGVHIVCTTAGELIGEACLAM 431
Query: 524 R 524
Sbjct: 432 E 432
>pdb|3IC9|A Chain A, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h.
pdb|3IC9|B Chain B, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h.
pdb|3IC9|C Chain C, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h.
pdb|3IC9|D Chain D, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h
Length = 492
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 101/226 (44%), Gaps = 17/226 (7%)
Query: 185 DIVRTAAAFTNPHTIKLSNRS-VTGFNFLLAV-ERRCLPE---PRNSALISADDLFRLGA 239
D +R A F + HT+++ + S V ++A R PE S L++ D+LF L
Sbjct: 113 DKIRGFAKFLDEHTLQVDDHSQVIAKRIVIATGSRPNYPEFLAAAGSRLLTNDNLFELND 172
Query: 240 WPGKTLVLGGSLMAVEIAATLNFLGVPVTLV-YSRRLLKHFDQEMVRILLSSLTKAGVSI 298
P V G ++ +E+ L+ LGV V + S + D+E R + +
Sbjct: 173 LPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANLQDEEXKRYAEKTFNE---EF 229
Query: 299 QCCVIEKVISSFDGMKGVRG-FHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIK 357
+VIS+ + V + +S + + F+ V+ A +K + L L + +++
Sbjct: 230 YFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKANVDKLGLENTSIELD 289
Query: 358 KKSYVVCNEKD-QTSVGNIFAVGG------IVHGKPNNASMAAISA 396
KK+ + +E QTSV +IF G ++H ++ +A +A
Sbjct: 290 KKNSPLFDELTLQTSVDHIFVAGDANNTLTLLHEAADDGKVAGTNA 335
>pdb|1MO9|A Chain A, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE Complexed With 2-Ketopropyl
Coenzyme M
pdb|1MO9|B Chain B, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE Complexed With 2-Ketopropyl
Coenzyme M
pdb|1MOK|A Chain A, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|B Chain B, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|C Chain C, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|D Chain D, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|2C3D|A Chain A, 2.15 Angstrom Crystal Structure Of 2-Ketopropyl Coenzyme M
Oxidoreductase Carboxylase With A Coenzyme M Disulfide
Bound At The Active Site
pdb|2C3D|B Chain B, 2.15 Angstrom Crystal Structure Of 2-Ketopropyl Coenzyme M
Oxidoreductase Carboxylase With A Coenzyme M Disulfide
Bound At The Active Site
pdb|2C3C|A Chain A, 2.01 Angstrom X-Ray Crystal Structure Of A Mixed Disulfide
Between Coenzyme M And Nadph-Dependent Oxidoreductase 2-
Ketopropyl Coenzyme M Carboxylase
pdb|2C3C|B Chain B, 2.01 Angstrom X-Ray Crystal Structure Of A Mixed Disulfide
Between Coenzyme M And Nadph-Dependent Oxidoreductase 2-
Ketopropyl Coenzyme M Carboxylase
pdb|3Q6J|A Chain A, Structural Basis For Carbon Dioxide Binding By
2-Ketopropyl Coenzyme M OxidoreductaseCARBOXYLASE
pdb|3Q6J|B Chain B, Structural Basis For Carbon Dioxide Binding By
2-Ketopropyl Coenzyme M OxidoreductaseCARBOXYLASE
Length = 523
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 142/368 (38%), Gaps = 47/368 (12%)
Query: 186 IVRTAAAFTNPHTIKLSNRSVTGFNFLLAVERRCLPEPRNSALISADDLF-------RLG 238
I+ A + HT++ + + N +LAV P + ++A +F L
Sbjct: 153 ILNCPAKVIDNHTVEAAGKVFKAKNLILAV--GAGPGTLDVPGVNAKGVFDHATLVEELD 210
Query: 239 AWPGKTLVL-GGSLMAVEIAATLNFLGV-PVTLVYSRRLLKHFDQEMVRILLSSLTKAGV 296
PG T+V+ GGS AVE N G V LV + L D E +L + + G+
Sbjct: 211 YEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLIKDNETRAYVLDRMKEQGM 270
Query: 297 SI-QCCVIEKVISSFDG-MKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHH--- 351
I + ++ +G ++ V P + M + DF L L
Sbjct: 271 EIISGSNVTRIEEDANGRVQAVVAMTPNGE-------------MRIETDFVFLGLGEQPR 317
Query: 352 -------IGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLY 404
+G+D+ K V+ NE QTSV N++AVG ++ G P A S +
Sbjct: 318 SAELAKILGLDLGPKGEVLVNEYLQTSVPNVYAVGDLI-GGPMEMFKARKSGCYAARNVM 376
Query: 405 GMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLP 464
G + ++ P + E +GM EE A A ++ P +N L+ LP
Sbjct: 377 GEKISYTPKNY-PDFLHTHYEVSFLGMGEEEAR---AAGHEIVTIKMPPDTENGLNVALP 432
Query: 465 ENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALR 524
+ ++ G + F K+V +VLG H +G ++ ++
Sbjct: 433 ASDRTML------YAFGKGTAHMSGFQKIVIDAKTRKVLGAHHVGYGAKDAFQYLNVLIK 486
Query: 525 KFLTKAEL 532
+ LT EL
Sbjct: 487 QGLTVDEL 494
>pdb|3L8K|A Chain A, Crystal Structure Of A Dihydrolipoyl Dehydrogenase From
Sulfolobus Solfataricus
pdb|3L8K|B Chain B, Crystal Structure Of A Dihydrolipoyl Dehydrogenase From
Sulfolobus Solfataricus
Length = 466
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 113/269 (42%), Gaps = 22/269 (8%)
Query: 229 ISADDLF----RLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLV--YSRRLLKHFDQE 282
+++DD+F P +++G + +EIA+ +GV ++ R L+ DQ+
Sbjct: 156 LTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITLEDQD 215
Query: 283 MVRILLSSLTKAGVSIQCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKF 342
+V LLS L K + V E D + + SK+ +F V +
Sbjct: 216 IVNTLLSIL-KLNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKK---SIFTNSVVLAAGRR 271
Query: 343 DFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVG---GIVHGKPNNASMAAISARLI 399
IG+ I K +V +E +T++ N+FA G G+ M+ +A I
Sbjct: 272 PVIPEGAREIGLSISKTG-IVVDETMKTNIPNVFATGDANGLAPYYHAAVRMSIAAANNI 330
Query: 400 IERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLL 459
+ GM +D +PV + VG+ A K+ G+ I ++ Y +++
Sbjct: 331 MAN--GMPVDYVDVKSIPVTIYTIPSLSYVGILPSKARKM----GIEIVEAEYNMEEDVS 384
Query: 460 DPLL--PENFVKLVCLKGGERVLGIHVIG 486
+ E +KL+ +G R++G +IG
Sbjct: 385 AQIYGQKEGVLKLIFERGSMRLIGAWMIG 413
>pdb|2A8X|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From
Mycobacterium Tuberculosis
pdb|2A8X|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From
Mycobacterium Tuberculosis
Length = 464
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 118/283 (41%), Gaps = 36/283 (12%)
Query: 255 EIAATLNFLGVPVTLV-YSRRLLKHFDQEMVRILLSSLTKAGVSIQCCVIEKVISSFDGM 313
E L GV VT+V + R L + D ++ + + K GV+I KV S DG
Sbjct: 185 EFGYVLKNYGVDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTAT--KVESIADG- 241
Query: 314 KGVRGFHPESKEPFADVFKT--VVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTS 371
G + +K+ A K V+ A+ + L GV + + + ++ +T+
Sbjct: 242 -GSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYXRTN 300
Query: 372 VGNIFAVGGIVHGKPNNASMAAISARLIIERLYGMQD-QLMDYSFLPVVVRGDVEFGTVG 430
VG+I+A+G V+G A +A + E + G + L D+ LP + G
Sbjct: 301 VGHIYAIGD-VNGLLQLAHVAEAQGVVAAETIAGAETLTLGDHRXLPRATFCQPNVASFG 359
Query: 431 MSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCLKGGERVLGIHVIGQ-NN 489
++E+ A +G + + +P N H +G +
Sbjct: 360 LTEQQARN----EGYDVVVAKFPFTANAK----------------------AHGVGDPSG 393
Query: 490 FVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAEL 532
FVKLV +LG H++G +VA ++ +LA R LT +EL
Sbjct: 394 FVKLVADAKHGELLGGHLVGHDVAELLPELTLAQRWDLTASEL 436
>pdb|3II4|A Chain A, Structure Of Mycobacterial Lipoamide Dehydrogenase Bound
To A Triazaspirodimethoxybenzoyl Inhibitor
pdb|3II4|B Chain B, Structure Of Mycobacterial Lipoamide Dehydrogenase Bound
To A Triazaspirodimethoxybenzoyl Inhibitor
Length = 466
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 119/284 (41%), Gaps = 36/284 (12%)
Query: 254 VEIAATLNFLGVPVTLV-YSRRLLKHFDQEMVRILLSSLTKAGVSIQCCVIEKVISSFDG 312
+E L GV VT+V + R L + D ++ + + K GV+I KV S DG
Sbjct: 186 MEFGYVLKNYGVDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTAT--KVESIADG 243
Query: 313 MKGVRGFHPESKEPFADVFKT--VVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQT 370
G + +K+ A K V+ A+ + L GV + + + ++ +T
Sbjct: 244 --GSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYMRT 301
Query: 371 SVGNIFAVGGIVHGKPNNASMAAISARLIIERLYGMQD-QLMDYSFLPVVVRGDVEFGTV 429
+VG+I+A+G V+G A +A + E + G + L D+ LP +
Sbjct: 302 NVGHIYAIGD-VNGLLQLAHVAEAQGVVAAETIAGAETLTLGDHRMLPRATFCQPNVASF 360
Query: 430 GMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCLKGGERVLGIHVIGQ-N 488
G++E+ A +G + + +P N H +G +
Sbjct: 361 GLTEQQARN----EGYDVVVAKFPFTANAK----------------------AHGVGDPS 394
Query: 489 NFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAEL 532
FVKLV +LG H++G +VA ++ +LA R LT +EL
Sbjct: 395 GFVKLVADAKHGELLGGHLVGHDVAELLPELTLAQRWDLTASEL 438
>pdb|1JEH|A Chain A, Crystal Structure Of Yeast E3, Lipoamide Dehydrogenase
pdb|1JEH|B Chain B, Crystal Structure Of Yeast E3, Lipoamide Dehydrogenase
pdb|1V59|A Chain A, Crystal Structure Of Yeast Lipoamide Dehydrogenase
Complexed With Nad+
pdb|1V59|B Chain B, Crystal Structure Of Yeast Lipoamide Dehydrogenase
Complexed With Nad+
Length = 478
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 126/290 (43%), Gaps = 19/290 (6%)
Query: 210 NFLLAVERRCLPEP----RNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGV 265
N ++A P P ++S+ L P + ++GG ++ +E+ + + LG
Sbjct: 148 NIIVATGSEVTPFPGIEIDEEKIVSSTGALSLKEIPKRLTIIGGGIIGLEMGSVYSRLGS 207
Query: 266 PVTLV-YSRRLLKHFDQEMVRILLSSLTKAGVSIQCCVIEKVISS--FDGMKGVRGFHPE 322
VT+V + ++ D E+ + L K G+ + KVIS+ D V +
Sbjct: 208 KVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFKLST--KVISAKRNDDKNVVEIVVED 265
Query: 323 SKEPFADVFKTVV--NAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGG 380
+K + + V A+ ++ A L IG+++ K+ +V +++ + +I VG
Sbjct: 266 TKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVIDDQFNSKFPHIKVVGD 325
Query: 381 IVHGK--PNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAK 438
+ G + A I+A +++ +G ++Y+ +P V+ E VG +EE K
Sbjct: 326 VTFGPMLAHKAEEEGIAAVEMLKTGHGH----VNYNNIPSVMYSHPEVAWVGKTEEQL-K 380
Query: 439 VYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCLKGGERVLGIHVIGQN 488
G D I K + E FVK++ ER+LG H+IG N
Sbjct: 381 EAGID-YKIGKFPFAANSRAKTNQDTEGFVKILIDSKTERILGAHIIGPN 429
>pdb|1XDI|A Chain A, Crystal Structure Of Lpda (Rv3303c) From Mycobacterium
Tuberculosis
pdb|1XDI|B Chain B, Crystal Structure Of Lpda (Rv3303c) From Mycobacterium
Tuberculosis
Length = 499
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 83/200 (41%), Gaps = 27/200 (13%)
Query: 218 RCLP--EPRNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYSR-R 274
R LP +P +++ L+ L A P +V+G + E LGVPVT+V S+
Sbjct: 157 RILPSAQPDGERILTWRQLYDLDALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDH 216
Query: 275 LLKHFDQEMVRILLSSLTKAGV---------SIQCCVIEKVISSFDGMKGVRGFHPESKE 325
+L + D + +L S + GV S+ +++ DG + V G H
Sbjct: 217 VLPYEDADAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDG-RTVEGSH----- 270
Query: 326 PFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGK 385
+ + + + L L +G+ + + +Y+ + +T I+A G
Sbjct: 271 --------ALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDRVSRTLATGIYAAGDCTGLL 322
Query: 386 PNNASMAAISARLIIERLYG 405
P AS+AA+ R+ + G
Sbjct: 323 P-LASVAAMQGRIAMYHALG 341
>pdb|4EQS|A Chain A, Crystal Structure Of The Y419f Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQS|B Chain B, Crystal Structure Of The Y419f Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 12/159 (7%)
Query: 224 RNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVY-SRRLLKHFDQE 282
RN A D F K LV+G +++E+ L G+ TL++ S ++ K D +
Sbjct: 130 RNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDAD 189
Query: 283 MVRILLSSLTKAGVSIQCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKF 342
M + +L L K + + + + I++ +G + F E + + + V KF
Sbjct: 190 MNQPILDELDKREIPYR---LNEEINAINGNEIT--FKSGKVEHYDMIIEGVGTHPNSKF 244
Query: 343 DFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGI 381
+ + + +K ++ N+K +T+V NI+A+G I
Sbjct: 245 ------IESSNIKLDRKGFIPVNDKFETNVPNIYAIGDI 277
>pdb|4EQR|A Chain A, Crystal Structure Of The Y361f Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQR|B Chain B, Crystal Structure Of The Y361f Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 12/159 (7%)
Query: 224 RNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVY-SRRLLKHFDQE 282
RN A D F K LV+G +++E+ L G+ TL++ S ++ K D +
Sbjct: 130 RNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDAD 189
Query: 283 MVRILLSSLTKAGVSIQCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKF 342
M + +L L K + + + + I++ +G + F E + + + V KF
Sbjct: 190 MNQPILDELDKREIPYR---LNEEINAINGNEIT--FKSGKVEHYDMIIEGVGTHPNSKF 244
Query: 343 DFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGI 381
+ + + +K ++ N+K +T+V NI+A+G I
Sbjct: 245 ------IESSNIKLDRKGFIPVNDKFETNVPNIYAIGDI 277
>pdb|4EMW|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Etvc-Coa
pdb|4EMW|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Etvc-Coa
Length = 436
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 12/159 (7%)
Query: 224 RNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVY-SRRLLKHFDQE 282
RN A D F K LV+G +++E+ L G+ TL++ S ++ K D +
Sbjct: 130 RNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDAD 189
Query: 283 MVRILLSSLTKAGVSIQCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKF 342
M + +L L K + + + + I++ +G + F E + + + V KF
Sbjct: 190 MNQPILDELDKREIPYR---LNEEINAINGNEIT--FKSGKVEHYDMIIEGVGTHPNSKF 244
Query: 343 DFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGI 381
+ + + +K ++ N+K +T+V NI+A+G I
Sbjct: 245 ------IESSNIKLDRKGFIPVNDKFETNVPNIYAIGDI 277
>pdb|4EM3|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Mevs-Coa
pdb|4EM3|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Mevs-Coa
pdb|4EM4|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Pethyl-Vs-Coa
pdb|4EM4|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Pethyl-Vs-Coa
Length = 437
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 12/159 (7%)
Query: 224 RNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVY-SRRLLKHFDQE 282
RN A D F K LV+G +++E+ L G+ TL++ S ++ K D +
Sbjct: 130 RNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDAD 189
Query: 283 MVRILLSSLTKAGVSIQCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKF 342
M + +L L K + + + + I++ +G + F E + + + V KF
Sbjct: 190 MNQPILDELDKREIPYR---LNEEINAINGNEIT--FKSGKVEHYDMIIEGVGTHPNSKF 244
Query: 343 DFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGI 381
+ + + +K ++ N+K +T+V NI+A+G I
Sbjct: 245 ------IESSNIKLDRKGFIPVNDKFETNVPNIYAIGDI 277
>pdb|4EQW|A Chain A, Crystal Structure Of The Y361f, Y419f Mutant Of
Staphylococcus Aureus Coadr
pdb|4EQW|B Chain B, Crystal Structure Of The Y361f, Y419f Mutant Of
Staphylococcus Aureus Coadr
Length = 437
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 12/159 (7%)
Query: 224 RNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVY-SRRLLKHFDQE 282
RN A D F K LV+G +++E+ L G+ TL++ S ++ K D +
Sbjct: 130 RNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDAD 189
Query: 283 MVRILLSSLTKAGVSIQCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKF 342
M + +L L K + + + + I++ +G + F E + + + V KF
Sbjct: 190 MNQPILDELDKREIPYR---LNEEINAINGNEIT--FKSGKVEHYDMIIEGVGTHPNSKF 244
Query: 343 DFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGI 381
+ + + +K ++ N+K +T+V NI+A+G I
Sbjct: 245 ------IESSNIKLDRKGFIPVNDKFETNVPNIYAIGDI 277
>pdb|1YQZ|A Chain A, Structure Of Coenzyme A-Disulfide Reductase From
Staphylococcus Aureus Refined At 1.54 Angstrom
Resolution
pdb|1YQZ|B Chain B, Structure Of Coenzyme A-Disulfide Reductase From
Staphylococcus Aureus Refined At 1.54 Angstrom
Resolution
Length = 438
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 12/159 (7%)
Query: 224 RNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVY-SRRLLKHFDQE 282
RN A D F K LV+G +++E+ L G+ TL++ S ++ K D +
Sbjct: 131 RNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDAD 190
Query: 283 MVRILLSSLTKAGVSIQCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKF 342
M + +L L K + + + + I++ +G + F E + + + V KF
Sbjct: 191 MNQPILDELDKREIPYR---LNEEINAINGNEIT--FKSGKVEHYDMIIEGVGTHPNSKF 245
Query: 343 DFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGI 381
+ + + +K ++ N+K +T+V NI+A+G I
Sbjct: 246 ------IESSNIKLDRKGFIPVNDKFETNVPNIYAIGDI 278
>pdb|4EQX|A Chain A, Crystal Structure Of The C43s Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQX|B Chain B, Crystal Structure Of The C43s Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 12/159 (7%)
Query: 224 RNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVY-SRRLLKHFDQE 282
RN A D F K LV+G +++E+ L G+ TL++ S ++ K D +
Sbjct: 130 RNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDAD 189
Query: 283 MVRILLSSLTKAGVSIQCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKF 342
M + +L L K + + + + I++ +G + F E + + + V KF
Sbjct: 190 MNQPILDELDKREIPYR---LNEEINAINGNEIT--FKSGKVEHYDMIIEGVGTHPNSKF 244
Query: 343 DFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGI 381
+ + + +K ++ N+K +T+V NI+A+G I
Sbjct: 245 ------IESSNIKLDRKGFIPVNDKFETNVPNIYAIGDI 277
>pdb|1BHY|A Chain A, Low Temperature Middle Resolution Structure Of P64k From
Masc Data
Length = 482
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 129/301 (42%), Gaps = 42/301 (13%)
Query: 180 KALGIDIVRTAAAFTNPHTIKLS--------------NRSVTGF-NFLLAVERRC--LP- 221
K+ +D+++ F +PH +++S + + F N ++A R LP
Sbjct: 106 KSRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTKLPF 165
Query: 222 EPRNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLV-YSRRLLKHFD 280
P + +I + L PGK L++GG ++ +E+ + LG + +V L++ D
Sbjct: 166 IPEDPRIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGAD 225
Query: 281 QEMVRILLSS----LTKAGVSIQCCVIEK----VISSFDGMKGVRGFHPESKEPFADVFK 332
+++V++ V+ + +E V +F+G KEP +
Sbjct: 226 RDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANA-------PKEP--QRYD 276
Query: 333 TVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMA 392
V+ A + + ++ GV + + ++ +++ +T+V +I+A+G IV G+P A A
Sbjct: 277 AVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIV-GQPMLAHKA 335
Query: 393 AISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSY 452
+ E G + D +P V E VG +E +A A I K+++
Sbjct: 336 VHEGHVAAENCAGHK-AYFDARVIPGVAYTSPEVAWVGETELSAK----ASARKITKANF 390
Query: 453 P 453
P
Sbjct: 391 P 391
>pdb|3KD9|A Chain A, Crystal Structure Of Pyridine Nucleotide Disulfide
Oxidoreductase From Pyrococcus Horikoshii
pdb|3KD9|B Chain B, Crystal Structure Of Pyridine Nucleotide Disulfide
Oxidoreductase From Pyrococcus Horikoshii
pdb|3KD9|C Chain C, Crystal Structure Of Pyridine Nucleotide Disulfide
Oxidoreductase From Pyrococcus Horikoshii
Length = 449
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 103/250 (41%), Gaps = 33/250 (13%)
Query: 255 EIAATLNFLGVPVTLVY--SRRLLKHFDQEMVRILLSSLTKAGVSIQCCVIEKVISSFDG 312
E+A G VT++ R L + FD+E+ IL L K V+++ ++++ +G
Sbjct: 162 EMAEAFAAQGKNVTMIVRGERVLRRSFDKEVTDILEEKLKKH-VNLR---LQEITMKIEG 217
Query: 313 MKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSV 372
+ V ++ E A++ + ++ + A +GV I + + NEK QTSV
Sbjct: 218 EERVEKVVTDAGEYKAELV-ILATGIKPNIELA----KQLGVRIGETGAIWTNEKMQTSV 272
Query: 373 GNIFAVGGIVHGK-------------PNNASMAAISARLIIERLYGMQDQLMDYSFLPVV 419
N++A G + + P M ++ + G + V
Sbjct: 273 ENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAG----SNIAGKELHFPGVLGTAVT 328
Query: 420 VRGDVEFGTVGMSE-EAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCLKGGER 478
DVE G G++E EA + Y I S+ P + P E ++K V R
Sbjct: 329 KFMDVEIGKTGLTEMEALKEGYDVRTAFIKASTRPHY----YPGGREIWLKGVVDNETNR 384
Query: 479 VLGIHVIGQN 488
+LG+ V+G +
Sbjct: 385 LLGVQVVGSD 394
>pdb|1OJT|A Chain A, Structure Of Dihydrolipoamide Dehydrogenase
Length = 482
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 129/301 (42%), Gaps = 42/301 (13%)
Query: 180 KALGIDIVRTAAAFTNPHTIKLS--------------NRSVTGF-NFLLAVERRC--LP- 221
K+ +D+++ F +PH +++S + + F N ++A R LP
Sbjct: 106 KSRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTKLPF 165
Query: 222 EPRNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLV-YSRRLLKHFD 280
P + +I + L PGK L++GG ++ +E+ + LG + +V L++ D
Sbjct: 166 IPEDPRIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGAD 225
Query: 281 QEMVRILLSS----LTKAGVSIQCCVIEK----VISSFDGMKGVRGFHPESKEPFADVFK 332
+++V++ V+ + +E V +F+G KEP +
Sbjct: 226 RDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANA-------PKEP--QRYD 276
Query: 333 TVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMA 392
V+ A + + ++ GV + + ++ +++ +T+V +I+A+G IV G+P A A
Sbjct: 277 AVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIV-GQPMLAHKA 335
Query: 393 AISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSY 452
+ E G + D +P V E VG +E +A A I K+++
Sbjct: 336 VHEGHVAAENCAGHK-AYFDARVIPGVAYTSPEVAWVGETELSAK----ASARKITKANF 390
Query: 453 P 453
P
Sbjct: 391 P 391
>pdb|3LXD|A Chain A, Crystal Structure Of Ferredoxin Reductase Arr From
Novosphingobium Aromaticivorans
Length = 415
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 25/134 (18%)
Query: 155 RNWNAATKLIKRFCIRAKN---DSMRELKALGIDIVRTAAAFTNPHTIKLSNRSVTGFNF 211
+ + A K +R CIR D E+K LG ++V A HT+KL + S +
Sbjct: 55 KEYLAREKTFERICIRPAQFWEDKAVEMK-LGAEVVSLDPA---AHTVKLGDGSAIEYGK 110
Query: 212 LLAVERRCLPEPRNSALISAD-----------DLFRL----GAWPGKTLVLGGSLMAVEI 256
L+ +PR + + AD D RL A +V+GG + +E
Sbjct: 111 LIWATGG---DPRRLSCVGADLAGVHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGLEA 167
Query: 257 AATLNFLGVPVTLV 270
AA L GV VTL+
Sbjct: 168 AAVLTKFGVNVTLL 181
>pdb|3EZN|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b
pdb|3EZN|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b
pdb|3FDZ|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b With Bound
2,3-Diphosphoglyceric Acid And 3- Phosphoglyceric Acid
pdb|3GP3|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 2-Phosphoserine
pdb|3GP3|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 2-Phosphoserine
pdb|3GP3|C Chain C, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 2-Phosphoserine
pdb|3GP3|D Chain D, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 2-Phosphoserine
pdb|3GP5|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 3-Phosphoglyceric Acid
And Vanadate
pdb|3GP5|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 3-Phosphoglyceric Acid
And Vanadate
pdb|3GW8|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With Vanadate And Glycerol
pdb|3GW8|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With Vanadate And Glycerol
Length = 257
Score = 32.0 bits (71), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 400 IERLYGMQDQLMDYSFLPVVVR---GDVEFGTV-GMSEEAAAKVYGADGLVIYKSSYPTF 455
I L+ +QDQ MD ++PVV + +G + G+++ A YG + +++++ SY T
Sbjct: 70 IRTLWHVQDQ-MDLMYVPVVHSWRLNERHYGALSGLNKAETAAKYGDEQVLVWRRSYDTP 128
Query: 456 DNLLDP 461
L+P
Sbjct: 129 PPALEP 134
>pdb|3LNT|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b With Bound Malonic Acid
pdb|3LNT|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b With Bound Malonic Acid
Length = 250
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 400 IERLYGMQDQLMDYSFLPVVVR---GDVEFGTV-GMSEEAAAKVYGADGLVIYKSSYPTF 455
I L+ +QDQ MD ++PVV + +G + G+++ A YG + +++++ SY T
Sbjct: 63 IRTLWHVQDQ-MDLMYVPVVHSWRLNERHYGALSGLNKAETAAKYGDEQVLVWRRSYDTP 121
Query: 456 DNLLDP 461
L+P
Sbjct: 122 PPALEP 127
>pdb|3FDZ|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b With Bound
2,3-Diphosphoglyceric Acid And 3- Phosphoglyceric Acid
Length = 257
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 400 IERLYGMQDQLMDYSFLPVVVR---GDVEFGTV-GMSEEAAAKVYGADGLVIYKSSYPTF 455
I L+ +QDQ MD ++PVV + +G + G+++ A YG + +++++ SY T
Sbjct: 70 IRTLWHVQDQ-MDLMYVPVVHSWRLNERHYGALSGLNKAETAAKYGDEQVLVWRRSYDTP 128
Query: 456 DNLLDP 461
L+P
Sbjct: 129 PPALEP 134
>pdb|1YUZ|A Chain A, Partially Reduced State Of Nigerythrin
pdb|1YUZ|B Chain B, Partially Reduced State Of Nigerythrin
Length = 202
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 14/75 (18%)
Query: 23 PSFHEAKTCSPTASSCDL-LPS------FETP---PAYISRLSYENR---ILIFTHAVLR 69
P + + +P+A SCDL L S +ET PA+I + E + +FT A L
Sbjct: 89 PGYEKPTVAAPSAYSCDLNLISGANGEIYETSDMYPAFIRKAQEEGNSKAVHVFTRAKLA 148
Query: 70 EENARAERYLNARGD 84
E+ AERYL A D
Sbjct: 149 -ESVHAERYLAAYND 162
>pdb|1YUX|A Chain A, Mixed Valant State Of Nigerythrin
pdb|1YUX|B Chain B, Mixed Valant State Of Nigerythrin
pdb|1YV1|A Chain A, Fully Reduced State Of Nigerythrin (All Ferrous)
pdb|1YV1|B Chain B, Fully Reduced State Of Nigerythrin (All Ferrous)
Length = 202
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 14/75 (18%)
Query: 23 PSFHEAKTCSPTASSCDL-LPS------FETP---PAYISRLSYENR---ILIFTHAVLR 69
P + + +P+A SCDL L S +ET PA+I + E + +FT A L
Sbjct: 89 PGYEKPTVAAPSAYSCDLNLISGANGEIYETSDMYPAFIRKAQEEGNSKAVHVFTRAKLA 148
Query: 70 EENARAERYLNARGD 84
E+ AERYL A D
Sbjct: 149 -ESVHAERYLAAYND 162
>pdb|3JQY|B Chain B, Crystal Strucutre Of The Polysia Specific
Acetyltransferase Neuo
pdb|3JQY|A Chain A, Crystal Strucutre Of The Polysia Specific
Acetyltransferase Neuo
pdb|3JQY|C Chain C, Crystal Strucutre Of The Polysia Specific
Acetyltransferase Neuo
Length = 252
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Query: 368 DQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEF 426
D GN+F G +V+ K N + +LIIE ++ +L V+ RGD +
Sbjct: 34 DDNGSGNVFVCGDLVNSKENKVQFNGNNNKLIIE-------DDVECRWLTVIFRGDNNY 85
>pdb|1H5R|B Chain B, Thymidylyltransferase Complexed With Thimidine And
Glucose- 1-Phospate
pdb|1H5T|B Chain B, Thymidylyltransferase Complexed With
Thymidylyldiphosphate- Glucose
pdb|1H5S|B Chain B, Thymidylyltransferase Complexed With Tmp
Length = 293
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 266 PVTLVYSRRLLKHFDQEMVRILLSSLTKAGV 296
PVT+ S++LL +D+ M+ LS+L AG+
Sbjct: 19 PVTMAVSKQLLPIYDKPMIYYPLSTLMLAGI 49
>pdb|1H5T|A Chain A, Thymidylyltransferase Complexed With
Thymidylyldiphosphate- Glucose
pdb|1H5R|A Chain A, Thymidylyltransferase Complexed With Thimidine And
Glucose- 1-Phospate
pdb|1H5R|C Chain C, Thymidylyltransferase Complexed With Thimidine And
Glucose- 1-Phospate
pdb|1H5R|D Chain D, Thymidylyltransferase Complexed With Thimidine And
Glucose- 1-Phospate
pdb|1H5T|C Chain C, Thymidylyltransferase Complexed With
Thymidylyldiphosphate- Glucose
pdb|1H5T|D Chain D, Thymidylyltransferase Complexed With
Thymidylyldiphosphate- Glucose
pdb|1H5S|C Chain C, Thymidylyltransferase Complexed With Tmp
Length = 293
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 266 PVTLVYSRRLLKHFDQEMVRILLSSLTKAGV 296
PVT+ S++LL +D+ M+ LS+L AG+
Sbjct: 19 PVTMAVSKQLLPIYDKPMIYYPLSTLMLAGI 49
>pdb|1H5S|A Chain A, Thymidylyltransferase Complexed With Tmp
Length = 293
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 266 PVTLVYSRRLLKHFDQEMVRILLSSLTKAGV 296
PVT+ S++LL +D+ M+ LS+L AG+
Sbjct: 19 PVTMAVSKQLLPIYDKPMIYYPLSTLMLAGI 49
>pdb|3PKQ|A Chain A, Q83d Variant Of S. Enterica Rmla With Dgtp
pdb|3PKQ|B Chain B, Q83d Variant Of S. Enterica Rmla With Dgtp
pdb|3PKQ|C Chain C, Q83d Variant Of S. Enterica Rmla With Dgtp
pdb|3PKQ|D Chain D, Q83d Variant Of S. Enterica Rmla With Dgtp
Length = 292
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 266 PVTLVYSRRLLKHFDQEMVRILLSSLTKAGV 296
PVT+ S++LL +D+ M+ LS+L AG+
Sbjct: 19 PVTMAVSKQLLPIYDKPMIYYPLSTLMLAGI 49
>pdb|3PKP|A Chain A, Q83s Variant Of S. Enterica Rmla With Datp
pdb|3PKP|B Chain B, Q83s Variant Of S. Enterica Rmla With Datp
pdb|3PKP|C Chain C, Q83s Variant Of S. Enterica Rmla With Datp
pdb|3PKP|D Chain D, Q83s Variant Of S. Enterica Rmla With Datp
pdb|3PKP|I Chain I, Q83s Variant Of S. Enterica Rmla With Datp
pdb|3PKP|J Chain J, Q83s Variant Of S. Enterica Rmla With Datp
pdb|3PKP|K Chain K, Q83s Variant Of S. Enterica Rmla With Datp
pdb|3PKP|L Chain L, Q83s Variant Of S. Enterica Rmla With Datp
Length = 292
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 266 PVTLVYSRRLLKHFDQEMVRILLSSLTKAGV 296
PVT+ S++LL +D+ M+ LS+L AG+
Sbjct: 19 PVTMAVSKQLLPIYDKPMIYYPLSTLMLAGI 49
>pdb|1H5S|D Chain D, Thymidylyltransferase Complexed With Tmp
Length = 293
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 266 PVTLVYSRRLLKHFDQEMVRILLSSLTKAGV 296
PVT+ S++LL +D+ M+ LS+L AG+
Sbjct: 19 PVTMAVSKQLLPIYDKPMIYYPLSTLMLAGI 49
>pdb|3EF6|A Chain A, Crystal Structure Of Toluene 2,3-Dioxygenase Reductase
pdb|4EMI|A Chain A, Toluene Dioxygenase Reductase In Reduced State In Complex
With Nad+
pdb|4EMJ|A Chain A, Complex Between The Reductase And Ferredoxin Components Of
Toluene Dioxygenase
Length = 410
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 8/51 (15%)
Query: 239 AWPGKT--LVLGGSLMAVEIAATLNFLGVPVTLVYSRRLLKHFDQEMVRIL 287
+W T L++GG L+ E+A T LG+ VT +L+ D+ +VR+L
Sbjct: 139 SWTSATRLLIVGGGLIGCEVATTARKLGLSVT------ILEAGDELLVRVL 183
>pdb|3BUU|A Chain A, Crystal Structure Of Lola Superfamily Protein Ne2245 From
Nitrosomonas Europaea
pdb|3BUU|B Chain B, Crystal Structure Of Lola Superfamily Protein Ne2245 From
Nitrosomonas Europaea
Length = 229
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 437 AKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCLKGGE 477
A+ Y G ++ S Y FDN+L P + LK GE
Sbjct: 161 AEFYSVSGRLLKTSRYENFDNILGEXRPTRIIXEDALKSGE 201
>pdb|3DAD|A Chain A, Crystal Structure Of The N-Terminal Regulatory Domains Of
The Formin Fhod1
pdb|3DAD|B Chain B, Crystal Structure Of The N-Terminal Regulatory Domains Of
The Formin Fhod1
Length = 339
Score = 28.9 bits (63), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 221 PEPRNSALISADDLFRLGAW-PGKTLVLGGSLM----AVEIAATLNFLGVPVTLVYSRRL 275
PEPR + S D LGA P +LG L A++++ + +L ++L R +
Sbjct: 35 PEPRRAPTCSLDGALPLGAQIPAVHRLLGAPLKLEDSALQVSPSGYYLDTELSLEEQREM 94
Query: 276 LKHFDQEMVRILLSSL---TKAGVSIQCCVIEKVISS 309
L+ F +E+ + +L T+ V + ++EK+ SS
Sbjct: 95 LEGFYEEISKGRKPTLILRTQLSVRVN-AILEKLYSS 130
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,836,933
Number of Sequences: 62578
Number of extensions: 602338
Number of successful extensions: 1438
Number of sequences better than 100.0: 97
Number of HSP's better than 100.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 1179
Number of HSP's gapped (non-prelim): 137
length of query: 535
length of database: 14,973,337
effective HSP length: 103
effective length of query: 432
effective length of database: 8,527,803
effective search space: 3684010896
effective search space used: 3684010896
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)