Query psy14461
Match_columns 535
No_of_seqs 520 out of 4113
Neff 8.6
Searched_HMMs 29240
Date Fri Aug 16 20:29:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14461.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14461hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b1b_A TRXR, thioredoxin reduc 100.0 1.2E-63 4E-68 537.2 45.5 432 89-535 43-506 (542)
2 3dgz_A Thioredoxin reductase 2 100.0 6.4E-61 2.2E-65 514.1 45.8 426 88-535 6-460 (488)
3 2x8g_A Thioredoxin glutathione 100.0 1.9E-60 6.4E-65 522.9 50.2 468 44-535 4-567 (598)
4 3dgh_A TRXR-1, thioredoxin red 100.0 1.9E-60 6.4E-65 509.9 46.8 423 89-535 10-460 (483)
5 3qfa_A Thioredoxin reductase 1 100.0 1.9E-60 6.6E-65 513.6 46.7 424 89-535 33-488 (519)
6 3dk9_A Grase, GR, glutathione 100.0 1.9E-59 6.6E-64 501.5 49.0 423 88-535 20-463 (478)
7 2wpf_A Trypanothione reductase 100.0 5.5E-60 1.9E-64 507.2 43.4 417 88-535 7-460 (495)
8 1ges_A Glutathione reductase; 100.0 1.1E-59 3.6E-64 499.5 44.9 417 88-535 4-435 (450)
9 4dna_A Probable glutathione re 100.0 1.8E-59 6E-64 499.7 46.5 414 89-535 6-435 (463)
10 3urh_A Dihydrolipoyl dehydroge 100.0 4.2E-59 1.4E-63 500.4 48.3 418 89-535 26-466 (491)
11 1fec_A Trypanothione reductase 100.0 1.8E-59 6.2E-64 502.7 45.1 416 89-535 4-456 (490)
12 1ojt_A Surface protein; redox- 100.0 1.2E-58 4E-63 495.8 49.0 418 88-535 6-452 (482)
13 3lad_A Dihydrolipoamide dehydr 100.0 1.1E-58 3.7E-63 495.4 46.2 417 89-535 4-446 (476)
14 2r9z_A Glutathione amide reduc 100.0 2E-58 6.7E-63 491.4 47.3 415 89-535 5-433 (463)
15 3ic9_A Dihydrolipoamide dehydr 100.0 7.4E-59 2.5E-63 498.2 44.1 420 88-535 8-448 (492)
16 3o0h_A Glutathione reductase; 100.0 8.2E-59 2.8E-63 497.2 44.1 414 89-535 27-455 (484)
17 2qae_A Lipoamide, dihydrolipoy 100.0 2.7E-58 9.1E-63 491.3 47.9 418 89-535 3-443 (468)
18 2hqm_A GR, grase, glutathione 100.0 1.3E-58 4.4E-63 494.9 45.5 417 88-535 11-456 (479)
19 2eq6_A Pyruvate dehydrogenase 100.0 1.6E-58 5.5E-63 492.3 44.2 415 88-534 6-435 (464)
20 1zmd_A Dihydrolipoyl dehydroge 100.0 3.1E-58 1.1E-62 491.6 46.0 420 88-535 6-448 (474)
21 3l8k_A Dihydrolipoyl dehydroge 100.0 8.1E-59 2.8E-63 495.0 41.3 411 88-535 4-439 (466)
22 1onf_A GR, grase, glutathione 100.0 1.6E-58 5.5E-63 496.7 41.8 420 89-535 3-481 (500)
23 2a8x_A Dihydrolipoyl dehydroge 100.0 1E-57 3.5E-62 486.4 45.7 417 89-535 4-439 (464)
24 1ebd_A E3BD, dihydrolipoamide 100.0 2.9E-57 1E-61 481.6 48.4 416 89-535 4-436 (455)
25 1dxl_A Dihydrolipoamide dehydr 100.0 7.8E-58 2.7E-62 488.1 43.8 418 89-535 7-445 (470)
26 1xdi_A RV3303C-LPDA; reductase 100.0 2.3E-57 8E-62 487.8 46.4 414 89-535 3-446 (499)
27 4eqs_A Coenzyme A disulfide re 100.0 2.3E-58 7.9E-63 487.0 33.2 380 90-535 2-414 (437)
28 1v59_A Dihydrolipoamide dehydr 100.0 7.7E-56 2.6E-60 473.6 48.4 420 88-535 5-453 (478)
29 1lvl_A Dihydrolipoamide dehydr 100.0 2.2E-56 7.5E-61 475.0 41.5 412 89-535 6-433 (458)
30 1zk7_A HGII, reductase, mercur 100.0 1.4E-55 4.7E-60 470.3 46.8 410 89-535 5-437 (467)
31 2yqu_A 2-oxoglutarate dehydrog 100.0 1.8E-55 6.3E-60 467.8 43.5 414 89-535 2-430 (455)
32 1mo9_A ORF3; nucleotide bindin 100.0 2E-55 6.7E-60 475.1 37.4 418 89-535 44-497 (523)
33 3kd9_A Coenzyme A disulfide re 100.0 2.1E-54 7.1E-59 458.9 38.5 384 89-535 4-418 (449)
34 3oc4_A Oxidoreductase, pyridin 100.0 4.8E-54 1.7E-58 456.4 35.7 380 89-535 3-416 (452)
35 3iwa_A FAD-dependent pyridine 100.0 2.3E-53 8E-58 453.6 35.8 393 89-535 4-435 (472)
36 3ntd_A FAD-dependent pyridine 100.0 7.5E-53 2.6E-57 459.7 38.4 388 89-535 2-442 (565)
37 2cdu_A NADPH oxidase; flavoenz 100.0 9.9E-53 3.4E-57 446.4 37.8 384 90-534 2-420 (452)
38 1nhp_A NADH peroxidase; oxidor 100.0 6.8E-52 2.3E-56 439.3 36.8 381 90-534 2-419 (447)
39 3cgb_A Pyridine nucleotide-dis 100.0 8.8E-52 3E-56 442.2 37.9 383 89-534 37-456 (480)
40 2bc0_A NADH oxidase; flavoprot 100.0 7E-52 2.4E-56 444.1 36.1 382 89-534 36-465 (490)
41 3ics_A Coenzyme A-disulfide re 100.0 5E-52 1.7E-56 455.2 35.2 385 89-535 37-458 (588)
42 2v3a_A Rubredoxin reductase; a 100.0 1.5E-43 5E-48 368.0 30.9 351 89-520 5-377 (384)
43 1xhc_A NADH oxidase /nitrite r 100.0 4.4E-45 1.5E-49 376.9 19.0 326 90-512 10-353 (367)
44 3klj_A NAD(FAD)-dependent dehy 100.0 2.3E-44 7.7E-49 373.6 20.9 344 90-532 11-375 (385)
45 2gqw_A Ferredoxin reductase; f 100.0 8.9E-41 3E-45 349.7 30.5 354 89-534 8-394 (408)
46 1q1r_A Putidaredoxin reductase 100.0 1.9E-40 6.5E-45 349.6 31.8 363 89-535 5-404 (431)
47 3ef6_A Toluene 1,2-dioxygenase 100.0 1.7E-39 5.8E-44 340.3 29.7 358 90-534 4-393 (410)
48 3lxd_A FAD-dependent pyridine 100.0 1.2E-38 4.1E-43 334.4 36.2 361 88-534 9-405 (415)
49 3fg2_P Putative rubredoxin red 100.0 2.9E-38 1E-42 330.3 32.5 358 90-533 3-393 (404)
50 4a5l_A Thioredoxin reductase; 100.0 2.8E-35 9.4E-40 296.4 32.0 288 88-404 4-308 (314)
51 4gcm_A TRXR, thioredoxin reduc 100.0 1.1E-34 3.8E-39 292.2 32.7 283 89-405 7-303 (312)
52 2q7v_A Thioredoxin reductase; 100.0 2.6E-33 8.8E-38 283.8 33.9 284 88-405 8-309 (325)
53 2vdc_G Glutamate synthase [NAD 100.0 2.3E-36 8E-41 319.6 10.3 320 42-405 35-441 (456)
54 2q0l_A TRXR, thioredoxin reduc 100.0 4.8E-33 1.6E-37 279.7 33.8 283 89-405 2-306 (311)
55 1hyu_A AHPF, alkyl hydroperoxi 100.0 2.7E-33 9.2E-38 301.7 33.2 281 88-405 212-513 (521)
56 3f8d_A Thioredoxin reductase ( 100.0 2.4E-33 8.3E-38 282.6 30.2 281 88-405 15-314 (323)
57 1m6i_A Programmed cell death p 100.0 9.9E-34 3.4E-38 303.2 28.0 300 88-407 11-353 (493)
58 3cty_A Thioredoxin reductase; 100.0 6.5E-33 2.2E-37 280.1 32.1 283 88-405 16-313 (319)
59 1fl2_A Alkyl hydroperoxide red 100.0 9.4E-33 3.2E-37 277.5 32.3 277 89-405 2-302 (310)
60 3r9u_A Thioredoxin reductase; 100.0 3.5E-33 1.2E-37 280.6 29.2 287 88-405 4-309 (315)
61 3itj_A Thioredoxin reductase 1 100.0 4.6E-33 1.6E-37 282.6 30.2 289 88-405 22-332 (338)
62 4g6h_A Rotenone-insensitive NA 100.0 6.6E-34 2.3E-38 304.6 24.8 282 90-404 44-397 (502)
63 4fk1_A Putative thioredoxin re 100.0 1.9E-33 6.5E-38 282.4 26.6 275 87-404 5-296 (304)
64 1gte_A Dihydropyrimidine dehyd 100.0 2.1E-35 7.1E-40 340.9 13.2 351 42-433 92-535 (1025)
65 1trb_A Thioredoxin reductase; 100.0 2.5E-32 8.4E-37 275.5 31.3 285 88-404 5-310 (320)
66 3fbs_A Oxidoreductase; structu 100.0 4.5E-33 1.6E-37 277.4 24.4 269 89-405 3-289 (297)
67 2a87_A TRXR, TR, thioredoxin r 100.0 7.3E-32 2.5E-36 274.4 30.1 283 88-404 14-312 (335)
68 1vdc_A NTR, NADPH dependent th 100.0 1.1E-31 3.8E-36 272.4 30.7 286 88-405 8-320 (333)
69 2zbw_A Thioredoxin reductase; 100.0 8.9E-32 3.1E-36 273.4 29.6 288 88-405 5-314 (335)
70 3lzw_A Ferredoxin--NADP reduct 100.0 8.9E-32 3E-36 272.4 29.1 284 88-405 7-312 (332)
71 3ab1_A Ferredoxin--NADP reduct 100.0 4.5E-31 1.5E-35 271.2 25.4 286 89-405 15-325 (360)
72 3sx6_A Sulfide-quinone reducta 100.0 1.3E-30 4.3E-35 275.2 23.8 279 89-404 5-340 (437)
73 3vrd_B FCCB subunit, flavocyto 100.0 9.8E-31 3.4E-35 272.8 16.0 303 90-433 4-352 (401)
74 3h8l_A NADH oxidase; membrane 100.0 2.3E-30 7.8E-35 270.8 18.4 272 90-405 3-333 (409)
75 3hyw_A Sulfide-quinone reducta 100.0 2.4E-30 8.3E-35 272.4 18.6 280 90-405 4-330 (430)
76 3d1c_A Flavin-containing putat 100.0 3E-29 1E-33 258.1 24.1 310 88-407 4-338 (369)
77 4a9w_A Monooxygenase; baeyer-v 100.0 4.2E-29 1.5E-33 254.9 22.5 292 88-405 3-349 (357)
78 1cjc_A Protein (adrenodoxin re 100.0 2.3E-29 7.8E-34 266.6 18.3 277 89-405 7-392 (460)
79 3h28_A Sulfide-quinone reducta 100.0 2.9E-29 1E-33 264.2 17.4 278 89-405 3-330 (430)
80 1lqt_A FPRA; NADP+ derivative, 100.0 2.6E-29 8.9E-34 265.9 15.8 275 89-405 4-384 (456)
81 3s5w_A L-ornithine 5-monooxyge 100.0 1.7E-27 5.7E-32 253.1 25.6 307 88-404 30-445 (463)
82 2xve_A Flavin-containing monoo 100.0 1.8E-26 6.1E-31 245.1 29.6 281 89-407 3-340 (464)
83 1o94_A Tmadh, trimethylamine d 99.9 9.5E-28 3.2E-32 268.1 17.0 271 88-406 389-698 (729)
84 3k30_A Histamine dehydrogenase 99.9 7.5E-28 2.6E-32 267.8 15.9 263 88-406 391-673 (690)
85 2gag_A Heterotetrameric sarcos 99.9 7.3E-27 2.5E-31 267.9 23.0 272 87-405 127-441 (965)
86 1ps9_A 2,4-dienoyl-COA reducta 99.9 1.3E-25 4.5E-30 249.0 22.3 253 88-403 373-671 (671)
87 1y56_A Hypothetical protein PH 99.9 3.5E-25 1.2E-29 236.9 19.0 247 87-406 107-375 (493)
88 2gv8_A Monooxygenase; FMO, FAD 99.9 4.8E-24 1.6E-28 225.5 23.9 174 205-407 163-361 (447)
89 3gwf_A Cyclohexanone monooxyge 99.9 1E-21 3.5E-26 211.9 21.4 290 88-404 8-453 (540)
90 2ywl_A Thioredoxin reductase r 99.9 3.6E-22 1.2E-26 184.2 13.5 149 243-405 3-168 (180)
91 3uox_A Otemo; baeyer-villiger 99.8 3.4E-20 1.2E-24 200.1 20.1 290 89-404 10-462 (545)
92 4ap3_A Steroid monooxygenase; 99.8 4.5E-19 1.5E-23 191.6 22.4 179 88-278 21-230 (549)
93 1w4x_A Phenylacetone monooxyge 99.8 3.8E-18 1.3E-22 184.5 21.7 295 88-405 16-463 (542)
94 4b63_A L-ornithine N5 monooxyg 99.7 8.3E-16 2.8E-20 164.4 26.2 200 204-406 199-485 (501)
95 2e5v_A L-aspartate oxidase; ar 99.5 1.7E-15 5.7E-20 160.9 3.9 206 175-405 125-370 (472)
96 2cul_A Glucose-inhibited divis 99.5 1.2E-13 4.2E-18 132.4 12.4 156 242-405 4-229 (232)
97 3fpz_A Thiazole biosynthetic e 99.4 7.3E-16 2.5E-20 155.7 -12.1 241 88-404 65-321 (326)
98 2gqf_A Hypothetical protein HI 99.3 9.2E-13 3.1E-17 136.7 4.1 187 89-280 5-266 (401)
99 1rp0_A ARA6, thiazole biosynth 99.2 4E-11 1.4E-15 118.5 11.2 161 242-405 40-272 (284)
100 3ces_A MNMG, tRNA uridine 5-ca 99.1 4.2E-10 1.5E-14 121.8 13.9 157 89-271 29-220 (651)
101 2zxi_A TRNA uridine 5-carboxym 98.9 1.2E-07 4.2E-12 102.3 21.4 158 89-271 28-219 (637)
102 2bry_A NEDD9 interacting prote 98.8 1.6E-09 5.4E-14 115.5 5.6 140 207-346 37-234 (497)
103 3k7m_X 6-hydroxy-L-nicotine ox 98.8 4.1E-10 1.4E-14 117.6 -1.5 95 280-382 203-306 (431)
104 3cp8_A TRNA uridine 5-carboxym 98.7 3.3E-08 1.1E-12 107.0 11.8 159 89-271 22-214 (641)
105 3lzw_A Ferredoxin--NADP reduct 98.5 4.4E-07 1.5E-11 90.5 10.9 99 242-346 8-130 (332)
106 3fbs_A Oxidoreductase; structu 98.5 8.6E-07 2.9E-11 86.9 12.6 99 242-346 3-116 (297)
107 3itj_A Thioredoxin reductase 1 98.5 3.4E-07 1.2E-11 91.6 9.8 103 241-347 22-147 (338)
108 3f8d_A Thioredoxin reductase ( 98.5 8.3E-07 2.8E-11 88.1 11.7 98 242-346 16-129 (323)
109 4a9w_A Monooxygenase; baeyer-v 98.4 7E-07 2.4E-11 89.9 11.2 92 242-340 4-130 (357)
110 2ywl_A Thioredoxin reductase r 98.4 1.2E-06 4.1E-11 79.6 11.2 106 89-220 2-111 (180)
111 2xve_A Flavin-containing monoo 98.4 1.5E-06 5.1E-11 91.7 13.4 106 242-347 3-173 (464)
112 2zbw_A Thioredoxin reductase; 98.4 1.5E-06 5.2E-11 87.0 12.6 94 242-341 6-120 (335)
113 3ab1_A Ferredoxin--NADP reduct 98.4 1.3E-06 4.4E-11 88.7 11.7 96 242-342 15-131 (360)
114 2gv8_A Monooxygenase; FMO, FAD 98.4 2E-06 6.8E-11 90.2 13.0 105 241-346 6-183 (447)
115 4fk1_A Putative thioredoxin re 98.4 2E-06 6.9E-11 85.1 11.8 100 243-347 8-122 (304)
116 3klj_A NAD(FAD)-dependent dehy 98.4 1.3E-06 4.4E-11 89.9 10.5 98 242-347 10-121 (385)
117 2q0l_A TRXR, thioredoxin reduc 98.4 2.5E-06 8.6E-11 84.4 12.3 97 243-346 3-118 (311)
118 3v76_A Flavoprotein; structura 98.3 2.1E-06 7.1E-11 89.2 10.7 95 241-342 27-187 (417)
119 3h8l_A NADH oxidase; membrane 98.3 5E-07 1.7E-11 93.6 5.7 100 242-346 2-117 (409)
120 3nlc_A Uncharacterized protein 98.3 2.8E-06 9.4E-11 91.1 11.2 97 241-343 107-278 (549)
121 1fl2_A Alkyl hydroperoxide red 98.3 3.6E-06 1.2E-10 83.3 11.3 98 243-345 3-118 (310)
122 3sx6_A Sulfide-quinone reducta 98.3 7.4E-07 2.5E-11 93.2 6.5 98 242-347 5-117 (437)
123 3cty_A Thioredoxin reductase; 98.3 5.9E-06 2E-10 82.2 12.5 97 242-346 17-130 (319)
124 2q7v_A Thioredoxin reductase; 98.2 5.5E-06 1.9E-10 82.6 12.2 98 242-345 9-126 (325)
125 3r9u_A Thioredoxin reductase; 98.2 4.4E-06 1.5E-10 82.5 11.0 97 242-346 5-122 (315)
126 3alj_A 2-methyl-3-hydroxypyrid 98.2 7.3E-06 2.5E-10 83.8 12.0 95 241-344 11-162 (379)
127 3d1c_A Flavin-containing putat 98.2 6.4E-06 2.2E-10 83.5 11.5 94 242-343 5-144 (369)
128 4ap3_A Steroid monooxygenase; 98.2 5.6E-06 1.9E-10 89.1 11.0 100 242-346 22-165 (549)
129 2x3n_A Probable FAD-dependent 98.2 8.1E-06 2.8E-10 84.0 11.7 97 242-344 7-168 (399)
130 1trb_A Thioredoxin reductase; 98.2 7E-06 2.4E-10 81.5 10.9 97 242-346 6-120 (320)
131 1vdc_A NTR, NADPH dependent th 98.2 3.7E-06 1.3E-10 84.1 8.8 97 242-346 9-128 (333)
132 3hyw_A Sulfide-quinone reducta 98.2 9.3E-07 3.2E-11 92.3 4.5 95 241-343 2-110 (430)
133 4a5l_A Thioredoxin reductase; 98.2 6.7E-06 2.3E-10 81.4 10.6 99 243-347 6-126 (314)
134 3ef6_A Toluene 1,2-dioxygenase 98.2 6.3E-06 2.2E-10 85.3 10.6 97 242-346 3-115 (410)
135 3gwf_A Cyclohexanone monooxyge 98.2 8.6E-06 2.9E-10 87.4 12.0 100 242-346 9-153 (540)
136 1xhc_A NADH oxidase /nitrite r 98.2 4.7E-06 1.6E-10 85.0 9.5 98 240-347 7-118 (367)
137 3oc4_A Oxidoreductase, pyridin 98.2 3.7E-06 1.3E-10 88.3 8.8 100 242-346 3-119 (452)
138 2gqf_A Hypothetical protein HI 98.1 1.1E-05 3.7E-10 83.3 11.7 96 242-343 5-169 (401)
139 1q1r_A Putidaredoxin reductase 98.1 3.9E-06 1.3E-10 87.6 8.4 99 241-347 4-119 (431)
140 3h28_A Sulfide-quinone reducta 98.1 1.6E-06 5.6E-11 90.3 5.5 96 241-345 2-112 (430)
141 3nix_A Flavoprotein/dehydrogen 98.1 1.6E-05 5.4E-10 82.3 12.6 99 242-342 6-166 (421)
142 1k0i_A P-hydroxybenzoate hydro 98.1 1.1E-05 3.9E-10 82.6 11.4 102 242-345 3-166 (394)
143 1kf6_A Fumarate reductase flav 98.1 1.8E-05 6.3E-10 86.0 13.5 34 89-122 6-41 (602)
144 3iwa_A FAD-dependent pyridine 98.1 5.6E-06 1.9E-10 87.3 9.0 103 241-346 3-129 (472)
145 3kd9_A Coenzyme A disulfide re 98.1 5E-06 1.7E-10 87.2 8.5 99 241-346 3-118 (449)
146 2vou_A 2,6-dihydroxypyridine h 98.1 1.5E-05 5.2E-10 81.9 12.0 98 241-344 5-155 (397)
147 4eqs_A Coenzyme A disulfide re 98.1 1.1E-05 3.7E-10 84.3 10.9 102 243-347 2-121 (437)
148 3ics_A Coenzyme A-disulfide re 98.1 4.3E-06 1.5E-10 90.8 8.0 103 241-346 36-156 (588)
149 3s5w_A L-ornithine 5-monooxyge 98.1 1.3E-05 4.4E-10 84.2 11.4 103 243-346 32-196 (463)
150 3fg2_P Putative rubredoxin red 98.1 6.5E-06 2.2E-10 85.1 8.7 96 242-346 2-114 (404)
151 1hyu_A AHPF, alkyl hydroperoxi 98.1 1.6E-05 5.3E-10 85.1 11.9 100 241-345 212-329 (521)
152 3ntd_A FAD-dependent pyridine 98.1 3.9E-06 1.3E-10 90.6 7.0 102 242-346 2-121 (565)
153 3v76_A Flavoprotein; structura 98.1 1.2E-05 4.2E-10 83.3 10.5 36 89-124 28-63 (417)
154 3uox_A Otemo; baeyer-villiger 98.1 9.4E-06 3.2E-10 87.2 9.8 100 242-346 10-153 (545)
155 3atr_A Conserved archaeal prot 98.1 2.2E-05 7.4E-10 82.4 12.3 102 242-344 7-164 (453)
156 1yvv_A Amine oxidase, flavin-c 98.1 2.7E-05 9.2E-10 77.7 12.4 95 242-343 3-163 (336)
157 2a87_A TRXR, TR, thioredoxin r 98.0 1.4E-05 4.7E-10 80.1 10.2 98 241-346 14-130 (335)
158 3vrd_B FCCB subunit, flavocyto 98.0 2.6E-06 9E-11 87.7 5.0 99 241-347 2-113 (401)
159 1y0p_A Fumarate reductase flav 98.0 3.3E-05 1.1E-09 83.5 13.5 100 242-342 127-317 (571)
160 4gcm_A TRXR, thioredoxin reduc 98.0 2E-05 6.7E-10 78.1 10.8 96 243-346 8-120 (312)
161 2i0z_A NAD(FAD)-utilizing dehy 98.0 2.1E-05 7.1E-10 82.4 11.4 95 242-342 27-191 (447)
162 1nhp_A NADH peroxidase; oxidor 98.0 2.5E-05 8.7E-10 81.7 11.6 102 242-346 1-119 (447)
163 3e1t_A Halogenase; flavoprotei 98.0 4.8E-05 1.6E-09 81.1 13.8 100 242-343 8-173 (512)
164 3lxd_A FAD-dependent pyridine 98.0 1.3E-05 4.6E-10 82.9 9.2 97 242-346 10-123 (415)
165 2gqw_A Ferredoxin reductase; f 98.0 1.6E-05 5.6E-10 82.2 9.7 97 241-345 7-116 (408)
166 3cgv_A Geranylgeranyl reductas 98.0 2.5E-05 8.5E-10 79.9 11.0 97 243-342 6-162 (397)
167 3pl8_A Pyranose 2-oxidase; sub 98.0 2.7E-08 9.4E-13 108.7 -12.0 65 291-355 270-337 (623)
168 3h8q_A Thioredoxin reductase 3 98.0 8.6E-06 2.9E-10 68.3 6.1 73 47-121 6-79 (114)
169 3oz2_A Digeranylgeranylglycero 98.0 3.2E-05 1.1E-09 78.7 11.6 97 243-342 6-162 (397)
170 3dme_A Conserved exported prot 98.0 4.1E-05 1.4E-09 77.2 12.3 54 286-342 155-209 (369)
171 2cul_A Glucose-inhibited divis 98.0 1.5E-05 5.1E-10 75.7 8.0 117 89-225 4-132 (232)
172 2cdu_A NADPH oxidase; flavoenz 97.9 9.7E-06 3.3E-10 85.0 7.0 101 243-346 2-121 (452)
173 3i3l_A Alkylhalidase CMLS; fla 97.9 4.6E-05 1.6E-09 82.6 12.4 100 241-342 23-188 (591)
174 3l8k_A Dihydrolipoyl dehydroge 97.9 4.5E-05 1.5E-09 80.3 11.8 98 243-347 6-149 (466)
175 3l4n_A Monothiol glutaredoxin- 97.9 1.9E-05 6.6E-10 67.4 7.1 63 50-114 6-71 (127)
176 3c96_A Flavin-containing monoo 97.9 4.6E-05 1.6E-09 78.7 11.4 101 242-344 5-171 (410)
177 1qo8_A Flavocytochrome C3 fuma 97.9 4.9E-05 1.7E-09 82.1 11.8 101 242-343 122-313 (566)
178 3rp8_A Flavoprotein monooxygen 97.9 7.2E-05 2.5E-09 77.1 12.3 96 241-344 23-183 (407)
179 4hb9_A Similarities with proba 97.9 7.2E-05 2.5E-09 76.6 12.2 95 243-342 3-166 (412)
180 1y56_A Hypothetical protein PH 97.9 2.4E-05 8.1E-10 83.1 8.4 100 242-346 109-223 (493)
181 2xdo_A TETX2 protein; tetracyc 97.9 6.3E-05 2.2E-09 77.3 11.4 97 241-345 26-185 (398)
182 1d4d_A Flavocytochrome C fumar 97.9 0.00011 3.6E-09 79.6 13.6 102 241-343 126-318 (572)
183 3cp8_A TRNA uridine 5-carboxym 97.9 7.7E-05 2.6E-09 80.8 12.2 107 231-343 11-175 (641)
184 1zk7_A HGII, reductase, mercur 97.8 9E-05 3.1E-09 77.9 12.6 99 241-346 4-154 (467)
185 3zyw_A Glutaredoxin-3; metal b 97.8 3.4E-05 1.2E-09 64.3 7.4 64 46-114 4-72 (111)
186 4g6h_A Rotenone-insensitive NA 97.8 1.8E-05 6.2E-10 84.1 7.1 105 242-347 43-174 (502)
187 3cgb_A Pyridine nucleotide-dis 97.8 1.4E-05 4.8E-10 84.5 6.1 102 242-346 37-156 (480)
188 1w4x_A Phenylacetone monooxyge 97.8 9.1E-05 3.1E-09 79.5 12.3 98 242-344 17-158 (542)
189 2qa1_A PGAE, polyketide oxygen 97.8 0.00017 5.9E-09 76.5 14.1 98 242-342 12-165 (500)
190 2qae_A Lipoamide, dihydrolipoy 97.8 5.4E-05 1.8E-09 79.7 10.1 98 242-346 3-152 (468)
191 2qa2_A CABE, polyketide oxygen 97.8 0.00017 5.8E-09 76.5 14.0 99 241-342 12-166 (499)
192 2bc0_A NADH oxidase; flavoprot 97.8 1.2E-05 4.2E-10 85.2 5.2 100 242-346 36-153 (490)
193 3ces_A MNMG, tRNA uridine 5-ca 97.8 8.7E-05 3E-09 80.4 11.8 97 242-344 29-183 (651)
194 3ihg_A RDME; flavoenzyme, anth 97.8 0.00011 3.9E-09 78.6 12.5 98 242-342 6-183 (535)
195 2zxi_A TRNA uridine 5-carboxym 97.8 0.00016 5.4E-09 78.1 13.4 97 242-344 28-182 (637)
196 1ryi_A Glycine oxidase; flavop 97.8 6.9E-05 2.3E-09 76.3 9.6 53 283-342 166-219 (382)
197 3fmw_A Oxygenase; mithramycin, 97.8 7.7E-05 2.6E-09 80.5 10.4 97 242-341 50-206 (570)
198 1dxl_A Dihydrolipoamide dehydr 97.8 5.5E-05 1.9E-09 79.6 9.0 98 242-346 7-155 (470)
199 1rp0_A ARA6, thiazole biosynth 97.7 0.00027 9.4E-09 69.0 13.4 37 88-124 39-76 (284)
200 3gx8_A Monothiol glutaredoxin- 97.7 6.4E-05 2.2E-09 63.6 7.6 65 47-114 5-75 (121)
201 1ebd_A E3BD, dihydrolipoamide 97.7 0.00013 4.3E-09 76.6 11.6 97 242-346 4-149 (455)
202 3urh_A Dihydrolipoyl dehydroge 97.7 0.00017 6E-09 76.3 12.8 95 242-343 26-171 (491)
203 2bry_A NEDD9 interacting prote 97.7 9.9E-05 3.4E-09 78.3 10.4 125 88-224 92-236 (497)
204 2wem_A Glutaredoxin-related pr 97.7 5.9E-05 2E-09 63.5 6.6 63 46-113 8-76 (118)
205 1y56_B Sarcosine oxidase; dehy 97.7 0.00022 7.5E-09 72.5 12.3 31 242-272 6-36 (382)
206 1zmd_A Dihydrolipoyl dehydroge 97.7 0.00012 4.1E-09 77.1 10.6 98 242-346 7-156 (474)
207 3alj_A 2-methyl-3-hydroxypyrid 97.7 0.00011 3.7E-09 75.0 9.9 36 89-124 12-47 (379)
208 2vdc_G Glutamate synthase [NAD 97.7 1.7E-05 5.8E-10 83.3 3.9 87 240-341 121-218 (456)
209 3qj4_A Renalase; FAD/NAD(P)-bi 97.7 0.00011 3.7E-09 73.8 9.7 92 243-340 3-163 (342)
210 2hqm_A GR, grase, glutathione 97.7 0.00016 5.6E-09 76.2 11.4 97 242-345 12-163 (479)
211 2gf3_A MSOX, monomeric sarcosi 97.7 0.00022 7.5E-09 72.6 11.7 52 285-343 154-206 (389)
212 2uzz_A N-methyl-L-tryptophan o 97.7 0.00017 5.7E-09 73.1 10.8 51 285-342 153-204 (372)
213 2wul_A Glutaredoxin related pr 97.7 5.2E-05 1.8E-09 63.6 5.7 64 46-114 8-77 (118)
214 1m6i_A Programmed cell death p 97.7 3.7E-05 1.3E-09 81.6 5.8 95 242-344 12-146 (493)
215 2a8x_A Dihydrolipoyl dehydroge 97.6 8.9E-05 3E-09 77.9 8.6 96 243-345 5-149 (464)
216 2gag_B Heterotetrameric sarcos 97.6 0.00017 5.7E-09 73.9 10.2 31 242-272 22-54 (405)
217 1ojt_A Surface protein; redox- 97.6 0.00013 4.5E-09 77.0 9.5 100 242-345 7-163 (482)
218 3ps9_A TRNA 5-methylaminomethy 97.6 0.00033 1.1E-08 77.2 13.0 50 287-342 423-473 (676)
219 3rhb_A ATGRXC5, glutaredoxin-C 97.6 7.7E-05 2.6E-09 62.1 6.0 67 46-114 7-74 (113)
220 3qfa_A Thioredoxin reductase 1 97.6 0.00013 4.4E-09 77.9 9.3 99 242-347 33-190 (519)
221 1v59_A Dihydrolipoamide dehydr 97.6 8.7E-05 3E-09 78.3 7.8 95 242-343 6-158 (478)
222 2qcu_A Aerobic glycerol-3-phos 97.6 0.00041 1.4E-08 73.6 13.0 56 286-342 154-210 (501)
223 3ipz_A Monothiol glutaredoxin- 97.6 0.00011 3.9E-09 60.8 6.6 64 46-114 6-74 (109)
224 4at0_A 3-ketosteroid-delta4-5a 97.6 0.00038 1.3E-08 74.0 12.4 58 283-342 204-264 (510)
225 2gmh_A Electron transfer flavo 97.6 0.00032 1.1E-08 75.9 11.9 101 242-342 36-217 (584)
226 1mo9_A ORF3; nucleotide bindin 97.6 0.00022 7.5E-09 76.1 10.3 94 242-346 44-190 (523)
227 2v3a_A Rubredoxin reductase; a 97.5 8.2E-05 2.8E-09 76.1 6.5 96 242-346 5-117 (384)
228 2oln_A NIKD protein; flavoprot 97.5 0.00054 1.8E-08 70.1 12.6 30 243-272 6-35 (397)
229 2r0c_A REBC; flavin adenine di 97.5 0.00047 1.6E-08 74.0 12.6 96 242-341 27-195 (549)
230 3nlc_A Uncharacterized protein 97.5 0.00021 7.1E-09 76.5 9.6 43 362-405 497-540 (549)
231 2i0z_A NAD(FAD)-utilizing dehy 97.5 0.00038 1.3E-08 72.8 11.1 35 89-123 27-61 (447)
232 1xdi_A RV3303C-LPDA; reductase 97.5 0.00023 7.9E-09 75.5 9.4 100 242-346 3-160 (499)
233 3dk9_A Grase, GR, glutathione 97.5 0.00017 5.7E-09 76.1 8.2 94 242-345 21-163 (478)
234 2r9z_A Glutathione amide reduc 97.5 0.0003 1E-08 73.9 9.7 93 242-346 5-146 (463)
235 3lad_A Dihydrolipoamide dehydr 97.5 0.00032 1.1E-08 73.8 9.7 96 242-344 4-156 (476)
236 1cjc_A Protein (adrenodoxin re 97.4 3E-05 1E-09 81.5 1.5 88 240-342 5-106 (460)
237 3o0h_A Glutathione reductase; 97.4 0.00036 1.2E-08 73.7 9.7 92 242-343 27-167 (484)
238 3dgz_A Thioredoxin reductase 2 97.4 0.00046 1.6E-08 72.9 10.2 97 243-346 8-163 (488)
239 3da1_A Glycerol-3-phosphate de 97.4 0.00073 2.5E-08 72.7 11.7 52 289-341 178-231 (561)
240 3ctg_A Glutaredoxin-2; reduced 97.4 0.00018 6.2E-09 61.5 5.6 66 46-113 25-94 (129)
241 1ges_A Glutathione reductase; 97.4 0.00047 1.6E-08 72.1 9.9 94 242-347 5-148 (450)
242 1fec_A Trypanothione reductase 97.4 0.00051 1.7E-08 72.7 10.1 99 242-346 4-167 (490)
243 2yqu_A 2-oxoglutarate dehydrog 97.4 0.00072 2.5E-08 70.7 11.0 93 89-221 168-266 (455)
244 3nyc_A D-arginine dehydrogenas 97.4 0.00056 1.9E-08 69.2 9.8 33 241-274 9-42 (381)
245 3nix_A Flavoprotein/dehydrogen 97.3 0.00064 2.2E-08 70.0 10.3 35 89-123 6-40 (421)
246 2wpf_A Trypanothione reductase 97.3 0.00045 1.5E-08 73.2 9.3 30 242-271 8-38 (495)
247 3dje_A Fructosyl amine: oxygen 97.3 0.0014 4.6E-08 68.0 12.6 31 242-272 7-38 (438)
248 2gag_A Heterotetrameric sarcos 97.3 0.00088 3E-08 76.8 12.1 103 242-346 129-257 (965)
249 3dgh_A TRXR-1, thioredoxin red 97.3 0.0012 4E-08 69.7 12.2 30 242-271 10-39 (483)
250 2x3n_A Probable FAD-dependent 97.3 0.00047 1.6E-08 70.6 8.9 36 88-123 6-41 (399)
251 1lvl_A Dihydrolipoamide dehydr 97.3 0.00072 2.5E-08 70.8 10.4 93 89-221 172-270 (458)
252 4dna_A Probable glutathione re 97.3 0.00028 9.5E-09 74.1 7.2 95 242-346 6-150 (463)
253 1lqt_A FPRA; NADP+ derivative, 97.3 7.4E-05 2.5E-09 78.4 2.7 89 241-344 3-111 (456)
254 1ps9_A 2,4-dienoyl-COA reducta 97.3 0.00024 8.2E-09 78.3 6.7 86 241-347 373-472 (671)
255 4dgk_A Phytoene dehydrogenase; 97.3 0.00089 3.1E-08 70.7 10.8 47 290-342 230-278 (501)
256 1wik_A Thioredoxin-like protei 97.3 0.00034 1.2E-08 57.9 5.9 70 47-121 4-79 (109)
257 3pvc_A TRNA 5-methylaminomethy 97.3 0.0015 5.1E-08 72.2 12.7 35 241-275 264-299 (689)
258 3dme_A Conserved exported prot 97.3 0.00098 3.4E-08 66.9 10.4 34 89-122 5-38 (369)
259 2aqj_A Tryptophan halogenase, 97.3 0.0019 6.5E-08 69.0 13.1 32 241-272 5-39 (538)
260 2x8g_A Thioredoxin glutathione 97.3 0.00072 2.5E-08 73.3 9.9 32 241-272 107-138 (598)
261 3jsk_A Cypbp37 protein; octame 97.3 0.0027 9.1E-08 63.5 13.2 162 242-404 80-331 (344)
262 2dkh_A 3-hydroxybenzoate hydro 97.2 0.0012 4E-08 72.3 11.3 100 242-341 33-210 (639)
263 1gte_A Dihydropyrimidine dehyd 97.2 0.00012 4E-09 84.6 3.4 91 241-344 187-290 (1025)
264 2eq6_A Pyruvate dehydrogenase 97.2 0.0011 3.8E-08 69.5 10.6 93 89-221 170-273 (464)
265 2wci_A Glutaredoxin-4; redox-a 97.2 0.00043 1.5E-08 59.6 5.9 65 45-114 22-91 (135)
266 2lqo_A Putative glutaredoxin R 97.2 0.00052 1.8E-08 54.9 6.0 34 57-91 3-36 (92)
267 2gjc_A Thiazole biosynthetic e 97.2 0.0036 1.2E-07 62.2 13.4 161 242-404 66-321 (326)
268 1kf6_A Fumarate reductase flav 97.2 0.0019 6.5E-08 70.0 12.5 98 242-340 6-195 (602)
269 1ryi_A Glycine oxidase; flavop 97.2 0.0011 3.6E-08 67.3 9.9 35 88-122 17-51 (382)
270 3nyc_A D-arginine dehydrogenas 97.2 0.0013 4.5E-08 66.4 10.6 35 88-123 9-43 (381)
271 3c4n_A Uncharacterized protein 97.2 0.00033 1.1E-08 72.1 6.0 31 242-272 37-69 (405)
272 2uzz_A N-methyl-L-tryptophan o 97.2 0.002 6.9E-08 65.0 11.6 35 89-123 3-37 (372)
273 3kkj_A Amine oxidase, flavin-c 97.2 0.00023 8E-09 67.3 4.3 38 89-126 3-40 (336)
274 3c1r_A Glutaredoxin-1; oxidize 97.1 0.00053 1.8E-08 57.6 5.7 65 47-113 14-82 (118)
275 3ka7_A Oxidoreductase; structu 97.1 0.0028 9.5E-08 65.2 12.3 48 289-343 204-253 (425)
276 3qj4_A Renalase; FAD/NAD(P)-bi 97.1 0.00084 2.9E-08 67.2 8.1 37 89-125 2-41 (342)
277 3nrn_A Uncharacterized protein 97.1 0.0019 6.7E-08 66.5 11.0 31 242-272 1-31 (421)
278 3k30_A Histamine dehydrogenase 97.1 0.00012 4E-09 81.0 1.7 85 241-343 391-489 (690)
279 1qo8_A Flavocytochrome C3 fuma 97.1 0.005 1.7E-07 66.2 14.5 38 87-124 120-157 (566)
280 3cgv_A Geranylgeranyl reductas 97.1 0.0022 7.4E-08 65.3 11.1 36 88-123 4-39 (397)
281 1pn0_A Phenol 2-monooxygenase; 97.1 0.0027 9.2E-08 69.7 12.1 30 243-272 10-44 (665)
282 2gf3_A MSOX, monomeric sarcosi 97.1 0.0036 1.2E-07 63.5 12.3 35 89-123 4-38 (389)
283 2yan_A Glutaredoxin-3; oxidore 97.0 0.0013 4.6E-08 53.7 7.2 70 47-121 6-81 (105)
284 3atr_A Conserved archaeal prot 97.0 0.002 6.9E-08 67.2 10.4 34 89-122 7-40 (453)
285 1y56_B Sarcosine oxidase; dehy 97.0 0.0022 7.6E-08 64.9 10.4 33 89-121 6-38 (382)
286 1y0p_A Fumarate reductase flav 97.0 0.0031 1.1E-07 67.9 12.1 37 88-124 126-162 (571)
287 3ihg_A RDME; flavoenzyme, anth 97.0 0.0027 9.3E-08 67.8 11.5 35 89-123 6-40 (535)
288 3i3l_A Alkylhalidase CMLS; fla 97.0 0.0026 8.8E-08 68.8 11.1 35 89-123 24-58 (591)
289 3fmw_A Oxygenase; mithramycin, 97.0 0.0026 8.9E-08 68.5 11.1 35 89-123 50-84 (570)
290 2gmh_A Electron transfer flavo 97.0 0.0014 4.8E-08 70.8 8.9 36 89-124 36-77 (584)
291 2rgh_A Alpha-glycerophosphate 97.0 0.0047 1.6E-07 66.5 12.8 32 241-272 32-63 (571)
292 1pj5_A N,N-dimethylglycine oxi 97.0 0.003 1E-07 71.2 11.7 31 242-272 5-36 (830)
293 3jsk_A Cypbp37 protein; octame 97.0 0.0037 1.3E-07 62.5 10.8 36 89-124 80-117 (344)
294 3e1t_A Halogenase; flavoprotei 97.0 0.0033 1.1E-07 66.7 11.2 35 88-122 7-41 (512)
295 2e5v_A L-aspartate oxidase; ar 96.9 0.0026 8.7E-08 66.9 10.1 30 243-272 1-30 (472)
296 2cq9_A GLRX2 protein, glutared 96.9 0.0017 5.9E-08 55.4 7.2 67 42-110 11-77 (130)
297 1onf_A GR, grase, glutathione 96.9 0.0037 1.3E-07 66.2 11.1 93 89-221 177-277 (500)
298 2gag_B Heterotetrameric sarcos 96.9 0.005 1.7E-07 62.8 11.8 35 88-122 21-57 (405)
299 4b63_A L-ornithine N5 monooxyg 96.9 0.0072 2.5E-07 63.9 13.3 105 243-347 41-219 (501)
300 3ps9_A TRNA 5-methylaminomethy 96.9 0.0034 1.1E-07 69.1 10.9 35 89-123 273-307 (676)
301 2ht9_A Glutaredoxin-2; thiored 96.9 0.0016 5.3E-08 56.9 6.6 64 45-110 36-99 (146)
302 2wdq_A Succinate dehydrogenase 96.9 0.009 3.1E-07 64.5 14.0 51 291-341 153-205 (588)
303 2e4g_A Tryptophan halogenase; 96.9 0.0065 2.2E-07 65.1 12.8 32 241-272 25-59 (550)
304 1o94_A Tmadh, trimethylamine d 96.9 0.00034 1.1E-08 77.8 2.6 85 241-343 389-492 (729)
305 3c4n_A Uncharacterized protein 96.9 0.0024 8.4E-08 65.5 8.9 35 88-122 36-72 (405)
306 2jad_A Yellow fluorescent prot 96.8 0.0015 5E-08 65.3 6.7 66 47-114 250-319 (362)
307 2qa2_A CABE, polyketide oxygen 96.8 0.0055 1.9E-07 64.8 11.7 36 88-123 12-47 (499)
308 1yvv_A Amine oxidase, flavin-c 96.8 0.0037 1.3E-07 61.9 9.8 36 89-124 3-38 (336)
309 3c4a_A Probable tryptophan hyd 96.8 0.0004 1.4E-08 70.8 2.4 34 242-275 1-37 (381)
310 1kte_A Thioltransferase; redox 96.8 0.0021 7.2E-08 52.2 6.3 60 49-110 3-65 (105)
311 1chu_A Protein (L-aspartate ox 96.8 0.0034 1.2E-07 67.1 9.6 30 242-272 9-38 (540)
312 1d4d_A Flavocytochrome C fumar 96.8 0.01 3.4E-07 64.0 13.3 37 88-124 126-162 (572)
313 2h88_A Succinate dehydrogenase 96.7 0.011 3.6E-07 64.3 12.8 50 292-342 166-217 (621)
314 2qa1_A PGAE, polyketide oxygen 96.7 0.008 2.7E-07 63.6 11.5 36 88-123 11-46 (500)
315 3c96_A Flavin-containing monoo 96.7 0.0059 2E-07 62.6 10.2 35 89-123 5-40 (410)
316 2pyx_A Tryptophan halogenase; 96.7 0.0061 2.1E-07 64.9 10.6 32 241-272 7-50 (526)
317 2vou_A 2,6-dihydroxypyridine h 96.7 0.005 1.7E-07 62.9 9.5 34 89-122 6-39 (397)
318 4b1b_A TRXR, thioredoxin reduc 96.7 0.0071 2.4E-07 64.6 10.8 92 89-221 224-321 (542)
319 2aqj_A Tryptophan halogenase, 96.6 0.0068 2.3E-07 64.7 10.6 34 89-122 6-42 (538)
320 1k0i_A P-hydroxybenzoate hydro 96.6 0.0066 2.2E-07 61.8 9.8 34 89-122 3-36 (394)
321 2weu_A Tryptophan 5-halogenase 96.6 0.01 3.4E-07 62.8 11.4 31 242-272 3-36 (511)
322 2hze_A Glutaredoxin-1; thiored 96.6 0.0029 1E-07 52.5 5.7 62 47-110 8-72 (114)
323 1aba_A Glutaredoxin; electron 96.6 0.0051 1.7E-07 48.2 6.9 52 59-112 1-58 (87)
324 3kkj_A Amine oxidase, flavin-c 96.6 0.0017 5.9E-08 61.2 4.8 33 243-275 4-37 (336)
325 3oz2_A Digeranylgeranylglycero 96.5 0.0021 7.2E-08 65.0 5.5 37 87-123 3-39 (397)
326 2bs2_A Quinol-fumarate reducta 96.5 0.015 5E-07 63.7 12.3 30 243-272 7-36 (660)
327 3ic9_A Dihydrolipoamide dehydr 96.5 0.011 3.9E-07 62.2 11.1 92 89-221 175-276 (492)
328 3qmx_A Glutaredoxin A, glutare 96.4 0.003 1E-07 51.1 4.6 49 56-109 14-62 (99)
329 2dkh_A 3-hydroxybenzoate hydro 96.2 0.017 5.9E-07 63.0 10.9 36 88-123 32-68 (639)
330 3nzn_A Glutaredoxin; structura 95.9 0.0056 1.9E-07 49.7 3.9 37 56-93 20-56 (103)
331 4hb9_A Similarities with proba 95.9 0.006 2.1E-07 62.1 5.1 36 89-124 2-37 (412)
332 4gde_A UDP-galactopyranose mut 95.9 0.0069 2.3E-07 63.9 5.5 51 281-339 222-273 (513)
333 1jnr_A Adenylylsulfate reducta 95.9 0.032 1.1E-06 60.9 10.9 31 242-272 23-57 (643)
334 1pj5_A N,N-dimethylglycine oxi 95.8 0.034 1.2E-06 62.6 11.2 34 89-122 5-39 (830)
335 4gut_A Lysine-specific histone 95.7 0.036 1.2E-06 61.7 10.4 34 241-274 336-370 (776)
336 3nrn_A Uncharacterized protein 95.5 0.01 3.6E-07 61.0 4.9 56 280-343 188-244 (421)
337 3gyx_A Adenylylsulfate reducta 95.5 0.025 8.7E-07 61.8 8.1 31 242-272 23-59 (662)
338 3ka7_A Oxidoreductase; structu 95.5 0.011 3.6E-07 60.8 4.9 36 89-124 1-36 (425)
339 4dgk_A Phytoene dehydrogenase; 95.4 0.0082 2.8E-07 63.2 3.7 36 90-125 3-38 (501)
340 1t1v_A SH3BGRL3, SH3 domain-bi 95.3 0.035 1.2E-06 43.9 6.3 48 58-110 2-55 (93)
341 3msz_A Glutaredoxin 1; alpha-b 95.2 0.018 6.1E-07 44.8 4.2 36 59-95 5-40 (89)
342 1rsg_A FMS1 protein; FAD bindi 95.1 0.017 5.8E-07 61.2 5.2 40 88-127 8-48 (516)
343 3rp8_A Flavoprotein monooxygen 95.1 0.016 5.4E-07 59.3 4.8 36 88-123 23-58 (407)
344 2xdo_A TETX2 protein; tetracyc 95.0 0.02 6.8E-07 58.4 5.2 35 89-123 27-61 (398)
345 2klx_A Glutaredoxin; thioredox 95.0 0.04 1.4E-06 43.0 5.9 34 58-92 6-39 (89)
346 2oln_A NIKD protein; flavoprot 95.0 0.019 6.6E-07 58.3 5.0 54 281-341 153-207 (397)
347 4at0_A 3-ketosteroid-delta4-5a 94.9 0.021 7.1E-07 60.5 5.3 37 88-124 41-77 (510)
348 2yg5_A Putrescine oxidase; oxi 94.9 0.022 7.4E-07 59.1 5.3 39 88-126 5-43 (453)
349 2b9w_A Putative aminooxidase; 94.9 0.018 6.3E-07 59.0 4.6 38 89-126 7-45 (424)
350 3c4a_A Probable tryptophan hyd 94.8 0.018 6.2E-07 58.3 4.2 34 90-123 2-37 (381)
351 2bcg_G Secretory pathway GDP d 94.8 0.018 6.2E-07 60.0 4.2 57 281-343 242-301 (453)
352 1i8t_A UDP-galactopyranose mut 94.7 0.028 9.6E-07 56.8 5.3 38 89-126 2-39 (367)
353 2e7p_A Glutaredoxin; thioredox 94.7 0.034 1.2E-06 45.6 5.0 47 46-93 8-54 (116)
354 3nks_A Protoporphyrinogen oxid 94.7 0.026 8.9E-07 58.8 5.2 53 282-340 235-288 (477)
355 3i6d_A Protoporphyrinogen oxid 94.7 0.019 6.4E-07 59.7 4.0 38 89-126 6-49 (470)
356 3hdq_A UDP-galactopyranose mut 94.7 0.029 1E-06 57.3 5.3 39 88-126 29-67 (397)
357 3ihm_A Styrene monooxygenase A 94.7 0.021 7E-07 59.1 4.3 34 239-272 20-53 (430)
358 2jae_A L-amino acid oxidase; o 94.6 0.029 9.9E-07 58.8 5.2 38 89-126 12-49 (489)
359 1s3e_A Amine oxidase [flavin-c 94.5 0.023 8E-07 60.1 4.5 38 89-126 5-42 (520)
360 3ihm_A Styrene monooxygenase A 94.5 0.026 9E-07 58.3 4.5 33 89-121 23-55 (430)
361 2e1m_A L-glutamate oxidase; L- 94.5 0.033 1.1E-06 56.4 5.1 38 89-126 45-83 (376)
362 2vvm_A Monoamine oxidase N; FA 94.4 0.033 1.1E-06 58.4 5.3 55 281-341 255-311 (495)
363 1v0j_A UDP-galactopyranose mut 94.3 0.024 8.3E-07 57.9 3.7 39 89-127 8-47 (399)
364 3dje_A Fructosyl amine: oxygen 94.2 0.035 1.2E-06 57.2 4.9 57 280-342 160-221 (438)
365 2iid_A L-amino-acid oxidase; f 94.2 0.032 1.1E-06 58.6 4.5 37 240-276 32-69 (498)
366 2ct6_A SH3 domain-binding glut 94.1 0.038 1.3E-06 45.5 3.8 46 58-108 8-59 (111)
367 2ivd_A PPO, PPOX, protoporphyr 94.0 0.037 1.3E-06 57.7 4.6 38 89-126 17-54 (478)
368 2g1u_A Hypothetical protein TM 94.0 0.065 2.2E-06 46.7 5.4 35 238-272 16-50 (155)
369 2r0c_A REBC; flavin adenine di 94.0 0.048 1.6E-06 58.3 5.5 36 88-123 26-61 (549)
370 2gjc_A Thiazole biosynthetic e 94.0 0.038 1.3E-06 54.8 4.2 37 88-124 65-103 (326)
371 3g5s_A Methylenetetrahydrofola 93.9 0.052 1.8E-06 55.0 5.1 31 242-272 2-32 (443)
372 2bi7_A UDP-galactopyranose mut 93.9 0.049 1.7E-06 55.3 5.1 38 89-126 4-41 (384)
373 3ic4_A Glutaredoxin (GRX-1); s 93.8 0.036 1.2E-06 43.5 3.1 35 59-94 13-47 (92)
374 3da1_A Glycerol-3-phosphate de 93.8 0.057 1.9E-06 57.9 5.6 35 88-122 18-52 (561)
375 1c0p_A D-amino acid oxidase; a 93.8 0.05 1.7E-06 54.5 4.9 33 89-121 7-39 (363)
376 3k7m_X 6-hydroxy-L-nicotine ox 93.8 0.043 1.5E-06 56.3 4.5 33 243-275 3-36 (431)
377 2b9w_A Putative aminooxidase; 93.7 0.059 2E-06 55.2 5.3 35 241-275 6-42 (424)
378 2wdq_A Succinate dehydrogenase 93.7 0.051 1.7E-06 58.6 5.0 36 88-123 7-42 (588)
379 4gde_A UDP-galactopyranose mut 93.7 0.046 1.6E-06 57.4 4.6 35 242-276 11-47 (513)
380 1sez_A Protoporphyrinogen oxid 93.7 0.056 1.9E-06 56.8 5.2 38 89-126 14-51 (504)
381 3g3e_A D-amino-acid oxidase; F 93.6 0.035 1.2E-06 55.4 3.4 34 89-122 1-40 (351)
382 2jae_A L-amino acid oxidase; o 93.6 0.046 1.6E-06 57.3 4.3 35 241-275 11-46 (489)
383 2e4g_A Tryptophan halogenase; 93.6 0.06 2E-06 57.5 5.3 58 281-344 194-254 (550)
384 2h88_A Succinate dehydrogenase 93.6 0.055 1.9E-06 58.7 5.0 35 88-122 18-52 (621)
385 2pyx_A Tryptophan halogenase; 93.6 0.049 1.7E-06 57.8 4.6 34 89-122 8-53 (526)
386 3pvc_A TRNA 5-methylaminomethy 93.5 0.054 1.8E-06 59.6 4.9 58 280-342 411-469 (689)
387 1c0p_A D-amino acid oxidase; a 93.5 0.06 2E-06 53.9 4.8 31 242-272 7-37 (363)
388 1fov_A Glutaredoxin 3, GRX3; a 93.4 0.081 2.8E-06 40.2 4.5 48 59-111 2-49 (82)
389 3nks_A Protoporphyrinogen oxid 93.4 0.05 1.7E-06 56.6 4.2 34 242-275 3-39 (477)
390 2weu_A Tryptophan 5-halogenase 93.4 0.046 1.6E-06 57.7 3.9 34 89-122 3-39 (511)
391 3lov_A Protoporphyrinogen oxid 93.3 0.062 2.1E-06 56.0 4.8 38 89-126 5-44 (475)
392 2iid_A L-amino-acid oxidase; f 93.3 0.061 2.1E-06 56.4 4.8 39 88-126 33-71 (498)
393 3fpz_A Thiazole biosynthetic e 93.3 0.06 2E-06 53.2 4.4 35 241-275 65-102 (326)
394 2bcg_G Secretory pathway GDP d 93.3 0.065 2.2E-06 55.7 4.8 35 242-276 12-47 (453)
395 3axb_A Putative oxidoreductase 93.2 0.061 2.1E-06 55.6 4.6 55 280-341 180-253 (448)
396 2khp_A Glutaredoxin; thioredox 93.1 0.093 3.2E-06 41.0 4.5 48 58-110 6-53 (92)
397 1rw1_A Conserved hypothetical 93.1 0.078 2.7E-06 43.8 4.1 32 60-92 2-33 (114)
398 1s3e_A Amine oxidase [flavin-c 93.1 0.069 2.4E-06 56.4 4.7 34 242-275 5-39 (520)
399 3eag_A UDP-N-acetylmuramate:L- 92.9 0.051 1.7E-06 53.9 3.3 76 241-347 4-83 (326)
400 1rsg_A FMS1 protein; FAD bindi 92.9 0.072 2.4E-06 56.3 4.5 33 242-274 9-43 (516)
401 3q9t_A Choline dehydrogenase a 92.7 0.16 5.3E-06 54.6 6.9 35 88-122 6-41 (577)
402 2ivd_A PPO, PPOX, protoporphyr 92.7 0.081 2.8E-06 55.1 4.6 35 241-275 16-51 (478)
403 3i6d_A Protoporphyrinogen oxid 92.7 0.041 1.4E-06 57.0 2.3 34 242-275 6-46 (470)
404 1chu_A Protein (L-aspartate ox 92.6 0.066 2.3E-06 57.1 3.8 35 88-123 8-42 (540)
405 2yg5_A Putrescine oxidase; oxi 92.6 0.092 3.1E-06 54.3 4.7 34 242-275 6-40 (453)
406 1pn0_A Phenol 2-monooxygenase; 92.5 0.091 3.1E-06 57.5 4.8 35 88-122 8-47 (665)
407 1h75_A Glutaredoxin-like prote 92.5 0.12 4E-06 39.2 4.2 31 59-90 2-32 (81)
408 4dsg_A UDP-galactopyranose mut 92.4 0.097 3.3E-06 54.9 4.8 38 89-126 10-48 (484)
409 2bi7_A UDP-galactopyranose mut 92.4 0.11 3.7E-06 52.8 5.0 34 242-275 4-38 (384)
410 2e1m_A L-glutamate oxidase; L- 92.4 0.091 3.1E-06 53.2 4.3 33 241-273 44-76 (376)
411 1z3e_A Regulatory protein SPX; 92.4 0.21 7E-06 42.4 5.9 33 59-92 2-34 (132)
412 3p1w_A Rabgdi protein; GDI RAB 92.4 0.13 4.6E-06 53.6 5.6 56 281-341 256-313 (475)
413 1r7h_A NRDH-redoxin; thioredox 92.3 0.13 4.5E-06 38.2 4.2 32 59-91 2-33 (75)
414 2qcu_A Aerobic glycerol-3-phos 92.3 0.076 2.6E-06 56.0 3.8 34 89-122 4-37 (501)
415 3g5s_A Methylenetetrahydrofola 92.3 0.094 3.2E-06 53.2 4.1 33 89-121 2-34 (443)
416 2bs2_A Quinol-fumarate reducta 92.2 0.082 2.8E-06 57.7 4.0 35 89-123 6-40 (660)
417 3fwz_A Inner membrane protein 92.2 0.19 6.4E-06 42.9 5.5 33 240-272 6-38 (140)
418 3g3e_A D-amino-acid oxidase; F 92.2 0.078 2.7E-06 52.7 3.5 30 243-272 2-37 (351)
419 1d5t_A Guanine nucleotide diss 92.2 0.093 3.2E-06 54.2 4.1 57 281-343 234-291 (433)
420 1sez_A Protoporphyrinogen oxid 92.1 0.11 3.6E-06 54.6 4.7 35 241-275 13-48 (504)
421 1jnr_A Adenylylsulfate reducta 92.1 0.085 2.9E-06 57.5 4.0 35 88-122 22-60 (643)
422 3qvp_A Glucose oxidase; oxidor 92.0 0.25 8.6E-06 53.0 7.5 57 285-342 231-293 (583)
423 2z3y_A Lysine-specific histone 92.0 0.13 4.3E-06 56.3 5.2 37 89-125 108-144 (662)
424 1id1_A Putative potassium chan 92.0 0.19 6.6E-06 43.5 5.4 32 241-272 3-34 (153)
425 1ttz_A Conserved hypothetical 92.0 0.14 4.9E-06 40.0 4.1 38 59-99 2-39 (87)
426 3hdq_A UDP-galactopyranose mut 91.9 0.13 4.4E-06 52.5 4.7 34 242-275 30-64 (397)
427 3gyx_A Adenylylsulfate reducta 91.8 0.086 3E-06 57.5 3.5 35 88-122 22-62 (662)
428 3axb_A Putative oxidoreductase 91.8 0.089 3.1E-06 54.3 3.5 34 242-275 24-59 (448)
429 3llv_A Exopolyphosphatase-rela 91.7 0.2 6.9E-06 42.6 5.2 31 242-272 7-37 (141)
430 2xag_A Lysine-specific histone 91.7 0.14 4.8E-06 57.5 5.2 38 89-126 279-316 (852)
431 1u6t_A SH3 domain-binding glut 91.7 0.14 4.9E-06 42.6 4.0 45 60-109 2-52 (121)
432 2kok_A Arsenate reductase; bru 91.6 0.14 4.9E-06 42.6 4.0 33 59-92 6-38 (120)
433 3l78_A Regulatory protein SPX; 91.5 0.16 5.4E-06 42.4 4.1 32 60-92 2-33 (120)
434 2rgh_A Alpha-glycerophosphate 91.5 0.12 4.3E-06 55.3 4.4 61 280-341 187-249 (571)
435 2vvm_A Monoamine oxidase N; FA 91.5 0.13 4.5E-06 53.8 4.5 34 242-275 40-74 (495)
436 1v0j_A UDP-galactopyranose mut 91.4 0.12 4.3E-06 52.6 4.1 34 242-275 8-43 (399)
437 3dfz_A SIRC, precorrin-2 dehyd 91.4 0.14 4.7E-06 47.8 4.0 34 239-272 29-62 (223)
438 1nm3_A Protein HI0572; hybrid, 91.0 0.17 5.8E-06 47.5 4.3 53 55-113 167-219 (241)
439 1b37_A Protein (polyamine oxid 91.0 0.17 5.7E-06 52.7 4.6 38 89-126 5-43 (472)
440 3lov_A Protoporphyrinogen oxid 90.9 0.13 4.5E-06 53.5 3.8 34 242-275 5-41 (475)
441 1i8t_A UDP-galactopyranose mut 90.9 0.15 5.1E-06 51.4 4.0 33 243-275 3-36 (367)
442 2k8s_A Thioredoxin; dimer, str 90.9 0.09 3.1E-06 40.0 1.8 34 58-92 2-39 (80)
443 1lss_A TRK system potassium up 90.9 0.26 8.8E-06 41.4 4.9 31 242-272 5-35 (140)
444 1wjk_A C330018D20RIK protein; 90.8 0.23 7.7E-06 39.8 4.3 37 57-94 16-52 (100)
445 1ego_A Glutaredoxin; electron 90.7 0.16 5.3E-06 38.8 3.1 22 59-81 2-23 (85)
446 4gut_A Lysine-specific histone 90.7 0.18 6.2E-06 56.1 4.7 37 89-125 337-373 (776)
447 2xag_A Lysine-specific histone 90.6 0.21 7E-06 56.1 5.1 35 240-274 277-312 (852)
448 2z3y_A Lysine-specific histone 90.6 0.2 6.8E-06 54.8 4.9 35 240-274 106-141 (662)
449 2hmt_A YUAA protein; RCK, KTN, 90.6 0.26 8.9E-06 41.6 4.7 32 241-272 6-37 (144)
450 4dsg_A UDP-galactopyranose mut 90.5 0.26 8.8E-06 51.7 5.5 35 241-275 9-45 (484)
451 3ic5_A Putative saccharopine d 90.4 0.21 7.3E-06 40.5 3.9 32 241-272 5-37 (118)
452 3t37_A Probable dehydrogenase; 90.4 0.2 6.9E-06 52.8 4.7 35 88-122 17-52 (526)
453 2fgx_A Putative thioredoxin; N 90.4 0.22 7.6E-06 40.5 3.8 36 58-96 30-69 (107)
454 1kdg_A CDH, cellobiose dehydro 90.2 0.23 7.7E-06 52.9 4.8 36 88-123 7-42 (546)
455 1kyq_A Met8P, siroheme biosynt 90.1 0.18 6E-06 48.6 3.5 33 240-272 12-44 (274)
456 1ju2_A HydroxynitrIle lyase; f 89.8 0.24 8.3E-06 52.6 4.7 35 87-122 25-59 (536)
457 3ado_A Lambda-crystallin; L-gu 89.6 0.22 7.5E-06 49.1 3.8 32 241-272 6-37 (319)
458 3lk7_A UDP-N-acetylmuramoylala 89.4 0.69 2.4E-05 47.9 7.7 125 90-271 11-145 (451)
459 3gkx_A Putative ARSC family re 89.1 0.3 1E-05 40.7 3.7 32 60-92 6-37 (120)
460 1d5t_A Guanine nucleotide diss 88.8 0.34 1.1E-05 49.9 4.8 35 242-276 7-42 (433)
461 3eag_A UDP-N-acetylmuramate:L- 88.8 0.95 3.3E-05 44.6 7.9 122 89-269 5-139 (326)
462 3p1w_A Rabgdi protein; GDI RAB 88.7 0.34 1.2E-05 50.5 4.7 34 243-276 22-56 (475)
463 3fz4_A Putative arsenate reduc 88.5 0.37 1.3E-05 40.1 3.9 33 59-92 4-36 (120)
464 3rdw_A Putative arsenate reduc 88.3 0.27 9.2E-06 41.0 2.9 33 59-92 6-38 (121)
465 3c85_A Putative glutathione-re 88.2 0.44 1.5E-05 42.4 4.6 32 241-272 39-71 (183)
466 1s3c_A Arsenate reductase; ARS 88.1 0.28 9.7E-06 42.1 3.0 33 59-92 3-35 (141)
467 3pl8_A Pyranose 2-oxidase; sub 88.0 0.37 1.3E-05 52.2 4.6 33 242-274 47-80 (623)
468 1n4w_A CHOD, cholesterol oxida 87.5 0.52 1.8E-05 49.5 5.3 36 88-123 5-40 (504)
469 3lk7_A UDP-N-acetylmuramoylala 87.4 0.81 2.8E-05 47.3 6.6 80 240-347 8-89 (451)
470 4e12_A Diketoreductase; oxidor 87.3 0.33 1.1E-05 46.8 3.4 31 242-272 5-35 (283)
471 3fim_B ARYL-alcohol oxidase; A 87.3 0.4 1.4E-05 51.3 4.3 35 89-123 3-38 (566)
472 2x5o_A UDP-N-acetylmuramoylala 87.2 0.37 1.3E-05 49.7 3.8 123 90-272 7-138 (439)
473 1b37_A Protein (polyamine oxid 87.1 0.49 1.7E-05 49.1 4.7 34 241-274 4-39 (472)
474 3ayj_A Pro-enzyme of L-phenyla 87.0 0.35 1.2E-05 53.0 3.6 36 88-123 56-100 (721)
475 3f0i_A Arsenate reductase; str 86.3 0.42 1.4E-05 39.7 3.0 35 60-95 6-40 (119)
476 1coy_A Cholesterol oxidase; ox 85.9 0.62 2.1E-05 49.0 4.8 36 88-123 11-46 (507)
477 3l4b_C TRKA K+ channel protien 85.0 0.74 2.5E-05 42.3 4.4 30 243-272 2-31 (218)
478 2x5o_A UDP-N-acetylmuramoylala 84.9 0.76 2.6E-05 47.4 4.8 75 241-347 5-81 (439)
479 2raf_A Putative dinucleotide-b 84.5 0.88 3E-05 41.6 4.6 33 240-272 18-50 (209)
480 1gpe_A Protein (glucose oxidas 84.4 0.85 2.9E-05 48.9 5.1 36 88-123 24-60 (587)
481 3oj0_A Glutr, glutamyl-tRNA re 84.0 0.44 1.5E-05 40.7 2.1 33 240-272 20-52 (144)
482 3ayj_A Pro-enzyme of L-phenyla 83.5 0.41 1.4E-05 52.4 2.1 35 241-275 56-100 (721)
483 4ffl_A PYLC; amino acid, biosy 83.3 1.1 3.8E-05 44.6 5.2 31 242-272 2-32 (363)
484 2dpo_A L-gulonate 3-dehydrogen 83.3 0.74 2.5E-05 45.3 3.7 31 242-272 7-37 (319)
485 1pjq_A CYSG, siroheme synthase 83.2 0.98 3.3E-05 46.8 4.8 33 240-272 11-43 (457)
486 2jbv_A Choline oxidase; alcoho 83.0 0.99 3.4E-05 47.9 4.9 55 287-341 215-272 (546)
487 4dio_A NAD(P) transhydrogenase 82.4 1.1 3.9E-05 45.3 4.7 33 240-272 189-221 (405)
488 3hn7_A UDP-N-acetylmuramate-L- 82.0 0.74 2.5E-05 48.7 3.3 77 240-347 18-97 (524)
489 3p2y_A Alanine dehydrogenase/p 81.9 0.97 3.3E-05 45.5 4.0 33 240-272 183-215 (381)
490 3hwr_A 2-dehydropantoate 2-red 81.9 1.2 4.2E-05 43.6 4.7 32 240-272 18-49 (318)
491 1f0y_A HCDH, L-3-hydroxyacyl-C 81.8 1.1 3.8E-05 43.4 4.4 31 242-272 16-46 (302)
492 3e8x_A Putative NAD-dependent 81.3 1.6 5.4E-05 40.3 5.1 32 241-272 21-53 (236)
493 1jw9_B Molybdopterin biosynthe 81.1 1 3.5E-05 42.5 3.7 33 241-273 31-64 (249)
494 1kdg_A CDH, cellobiose dehydro 81.0 1.1 3.9E-05 47.4 4.4 30 243-272 9-38 (546)
495 2eez_A Alanine dehydrogenase; 80.9 1.5 5.2E-05 43.9 5.1 32 241-272 166-197 (369)
496 3gpi_A NAD-dependent epimerase 80.5 1.7 5.9E-05 41.4 5.2 31 242-272 4-34 (286)
497 2axo_A Hypothetical protein AT 80.4 1.2 4E-05 42.6 3.7 24 58-82 44-67 (270)
498 3i83_A 2-dehydropantoate 2-red 79.8 1.4 4.7E-05 43.2 4.3 31 242-272 3-33 (320)
499 1x13_A NAD(P) transhydrogenase 79.8 1.4 5E-05 44.7 4.5 33 240-272 171-203 (401)
500 2vhw_A Alanine dehydrogenase; 79.4 1.8 6.2E-05 43.5 5.1 33 240-272 167-199 (377)
No 1
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=1.2e-63 Score=537.15 Aligned_cols=432 Identities=24% Similarity=0.350 Sum_probs=344.4
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCc--------ccc-------cccccccccccccchhh-cccccc-ccc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSH--------LSF-------RKKRRLYYPVAMSDLEL-EQDSTS-ALN 151 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~--------~~~-------~~~~l~~~~~~i~~~~~-~~~~~~-~~~ 151 (535)
+|++|||+||+|+.+|++....+.+|+|||+... +++ .|.+++.....+..... ....+. ...
T Consensus 43 YDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~~ 122 (542)
T 4b1b_A 43 YDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKFD 122 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCcccC
Confidence 8999999999999999999999999999997542 221 11111111000100000 011111 123
Q ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHHhcCcEEEEeEEEEecCCEEEEc-------eeEEEcceEEEeeCceecC-CC
Q psy14461 152 VTIRNWNAATKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLS-------NRSVTGFNFLLAVERRCLP-EP 223 (535)
Q Consensus 152 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~-------~~~~~~d~lViATGs~p~~-~i 223 (535)
...+||.+++++++..++++...+...+++.+|+++.|.+.+.+++++.+. .+++++|++|||||++|.. +.
T Consensus 123 ~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~~~v~V~~~~~~~~~~~i~a~~iiIATGs~P~~P~~ 202 (542)
T 4b1b_A 123 NLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCRPHIPDD 202 (542)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEETTEEEEEEC--CCCEEEEEEEEEEECCCEEECCCSS
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCCCcceEeecccCCceEEEeeeeEEeccCCCCCCCCc
Confidence 557899999999999999999989999999999999999999999999872 2679999999999999987 54
Q ss_pred C-C--CceechhhHHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEcCcCCccCcHHHHHHHHHhhhcCCeEE-c
Q psy14461 224 R-N--SALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYSRRLLKHFDQEMVRILLSSLTKAGVSI-Q 299 (535)
Q Consensus 224 ~-G--~~v~~~~~~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~l~~~~~~~~~~~~~~l~~~gV~i-~ 299 (535)
+ + +.++|+++++.++++|++++|||||++|+|+|..|+++|.+||++.++++++.+|+++.+.+++.|+++||++ +
T Consensus 203 ~~~~~~~~~ts~~~l~l~~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~~~D~ei~~~l~~~l~~~gi~~~~ 282 (542)
T 4b1b_A 203 VEGAKELSITSDDIFSLKKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLRGFDQQCAVKVKLYMEEQGVMFKN 282 (542)
T ss_dssp SBTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred ccCCCccccCchhhhccccCCceEEEECCCHHHHHHHHHHHhcCCeEEEecccccccccchhHHHHHHHHHHhhcceeec
Confidence 4 3 5689999999999999999999999999999999999999999998877889999999999999999999999 9
Q ss_pred ceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCce-EcCCCCCcCCCCEEEe
Q psy14461 300 CCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYV-VCNEKDQTSVGNIFAV 378 (535)
Q Consensus 300 ~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i-~vd~~~~T~~~~IyA~ 378 (535)
+..+++++.. ++.+.|.+. +++ ++++|.|++|+|++||++.|+++.++++++++|.+ .+|+++||++|+|||+
T Consensus 283 ~~~v~~~~~~-~~~~~v~~~---~~~--~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~Ts~p~IyAi 356 (542)
T 4b1b_A 283 GILPKKLTKM-DDKILVEFS---DKT--SELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCTNIPSIFAV 356 (542)
T ss_dssp TCCEEEEEEE-TTEEEEEET---TSC--EEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCTTSBCSSTTEEEC
T ss_pred ceEEEEEEec-CCeEEEEEc---CCC--eEEEEEEEEcccccCCccccCcccceeeecccCceEeccccccccCCCeEEe
Confidence 9999999887 566777773 565 68899999999999999999999999999876664 7889999999999999
Q ss_pred CCcCCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCccc
Q psy14461 379 GGIVHGK-PNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDN 457 (535)
Q Consensus 379 GD~~~~~-~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~ 457 (535)
|||+ ++ |++.|.|.+||++|++||++......++..+|+++|++|++|+||+||+||+++++..++.++...+.....
T Consensus 357 GDv~-~~~p~La~~A~~eg~~aa~~i~g~~~~~~d~~~iP~~vft~PeiA~VGlTE~eA~~~g~~~~v~~~~~~~~~~~~ 435 (542)
T 4b1b_A 357 GDVA-ENVPELAPVAIKAGEILARRLFKDSDEIMDYSYIPTSIYTPIEYGACGYSEEKAYELYGKSNVEVFLQEFNNLEI 435 (542)
T ss_dssp TTSB-TTCCCCHHHHHHHHHHHHHHHHSCCCCCCCCSSCCEEECSSSCEEEEECCHHHHHHHHCTTTEEEEEC-------
T ss_pred cccc-CCchhHHHHHHHHHHHHHHHHhcCCCcccCCCCCceEEeCCCCeEEEeCCHHHHHHhCCCCcEEEEEeeccchhh
Confidence 9999 55 789999999999999999998877789999999999999999999999999998775556665544433322
Q ss_pred ccCCCCCcchhhhhhccCCcccccccccCcceEEEEEE-ECCCCeEEEEEEEcCchhHHHHHHHHHHHCCCCHHHHcCC
Q psy14461 458 LLDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVC-LKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535 (535)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~-~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~~l~~~ 535 (535)
+. ..+. .+.+. ...+. .....+.||+||++ +++|++|||+|++|++|+|||+.+++||++++|++||+++
T Consensus 436 ~~-~~~~-~~~~~--~~~~~----~~~~~~~g~vKli~~~~~t~~ILGa~ivG~~A~ElI~~~alAi~~~~t~~dl~~~ 506 (542)
T 4b1b_A 436 SA-VHRQ-KHIRA--QKDEY----DLDVSSTCLAKLVCLKNEDNRVIGFHYVGPNAGEVTQGMALALRLKVKKKDFDNC 506 (542)
T ss_dssp ------------------------------CCCEEEEEETTTTTBEEEEEEESTTHHHHHHHHHHHHHTCCBHHHHHHC
T ss_pred hh-hhhh-hhhhc--ccccc----cccCCCceEEEEEEEeCCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhcc
Confidence 21 1000 00000 00000 01125689999995 5679999999999999999999999999999999999764
No 2
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=6.4e-61 Score=514.10 Aligned_cols=426 Identities=23% Similarity=0.337 Sum_probs=353.3
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCC--------ccccccc---cccc----ccccccchhhccc--ccccc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGS--------HLSFRKK---RRLY----YPVAMSDLELEQD--STSAL 150 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~--------~~~~~~~---~l~~----~~~~i~~~~~~~~--~~~~~ 150 (535)
.++|+|||+|++|+.+|+.+...+.+|+|||+.+ .+++... -+|. ............. +....
T Consensus 6 ~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~~ 85 (488)
T 3dgz_A 6 SFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEVA 85 (488)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCcccC
Confidence 4799999999999999999988899999999732 2222110 0111 0000000000111 11111
Q ss_pred cccccCHHHHHHHHHHHHHHHHHHHHHHHHhcCcEEEEeEEEEecCCEEEEce-----eEEEcceEEEeeCceecC-C-C
Q psy14461 151 NVTIRNWNAATKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLSN-----RSVTGFNFLLAVERRCLP-E-P 223 (535)
Q Consensus 151 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~~-----~~~~~d~lViATGs~p~~-~-i 223 (535)
....++|..+..+.+.++..+...+...++..+|+++.+++.+.+++++.+.. .++.||+||||||++|.. + +
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~~p~~i 165 (488)
T 3dgz_A 86 QPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPRYPTQV 165 (488)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESSSSEEEEECTTSCEEEEEEEEEEECCCEEECCCSSC
T ss_pred CcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCceEEEECCEEEEcCCCCCCCCCCC
Confidence 13467999999999999999988888888999999999999999999888842 579999999999999999 8 9
Q ss_pred CC--CceechhhHHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEcCcCCccCcHHHHHHHHHhhhcCCeEE-cc
Q psy14461 224 RN--SALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYSRRLLKHFDQEMVRILLSSLTKAGVSI-QC 300 (535)
Q Consensus 224 ~G--~~v~~~~~~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~l~~~~~~~~~~~~~~l~~~gV~i-~~ 300 (535)
|| +.++++++++.+...+++++|||+|++|+|+|..|+++|.+||++++..+++.+++++.+.+.+.|+++||++ ++
T Consensus 166 ~G~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~~~d~~~~~~l~~~l~~~gv~~~~~ 245 (488)
T 3dgz_A 166 KGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLRGFDQQMSSLVTEHMESHGTQFLKG 245 (488)
T ss_dssp BTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEET
T ss_pred CCcccccCcHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcccccCCHHHHHHHHHHHHHCCCEEEeC
Confidence 99 5678999999988899999999999999999999999999999999955788999999999999999999999 99
Q ss_pred eEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeec-CCCceEcCCCCCcCCCCEEEeC
Q psy14461 301 CVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIK-KKSYVVCNEKDQTSVGNIFAVG 379 (535)
Q Consensus 301 ~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~-~~G~i~vd~~~~T~~~~IyA~G 379 (535)
+.+++++..+++.+.+++.+..+|++.++++|.|++|+|++||+++++++..+++++ ++|+|.||+++||+.|+|||+|
T Consensus 246 ~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd~~~~t~~~~IyA~G 325 (488)
T 3dgz_A 246 CVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQEATSVPHIYAIG 325 (488)
T ss_dssp EEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBCCCTTSBCSSTTEEECG
T ss_pred CEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCCeEeECCCCccCCCCEEEeE
Confidence 999999875345567777643346655689999999999999999877788999998 7999999999999999999999
Q ss_pred CcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCccccc
Q psy14461 380 GIVHGKPNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLL 459 (535)
Q Consensus 380 D~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~ 459 (535)
||+.+.+.+++.|.+||++||.||++......++..+|+++|++|++++||+||+||+++++...+.+....|.++.+..
T Consensus 326 D~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~ 405 (488)
T 3dgz_A 326 DVAEGRPELTPTAIKAGKLLAQRLFGKSSTLMDYSNVPTTVFTPLEYGCVGLSEEEAVALHGQEHVEVYHAYYKPLEFTV 405 (488)
T ss_dssp GGBTTCCCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEECSSSEEEEEECCHHHHHHHHCGGGEEEEEEECCCHHHHH
T ss_pred EecCCCCcchhHHHHHHHHHHHHHcCCCCccCCCCCCCEEEECCCCeEEEeCCHHHHHhhCCCCcEEEEEccccchhhhh
Confidence 99745688999999999999999999776667888999999999999999999999998755336777776676555443
Q ss_pred CCCCCcchhhhhhccCCcccccccccCcceEEEEEEE-CCCCeEEEEEEEcCchhHHHHHHHHHHHCCCCHHHHcCC
Q psy14461 460 DPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCL-KGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535 (535)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~-~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~~l~~~ 535 (535)
+... ++.||+||++| ++|++|||+|++|++|.|+|+.+++||++++|++||.++
T Consensus 406 -~~~~---------------------~~~g~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~ 460 (488)
T 3dgz_A 406 -ADRD---------------------ASQCYIKMVCMREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMQT 460 (488)
T ss_dssp -TTCC---------------------CTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTS
T ss_pred -hccC---------------------CCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcc
Confidence 2211 36899999999 589999999999999999999999999999999999874
No 3
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=1.9e-60 Score=522.89 Aligned_cols=468 Identities=25% Similarity=0.375 Sum_probs=374.1
Q ss_pred CCChhHHHHhhhcCCcEEEEeCCCchhhHHHHHHHHHhcCCcc-------------------------------------
Q psy14461 44 FETPPAYISRLSYENRILIFTHAVLREENARAERYLNARGDRF------------------------------------- 86 (535)
Q Consensus 44 ~~~l~~~~~~~i~~~~v~v~~k~~cp~~~~~~k~~~~~~~~~~------------------------------------- 86 (535)
.++.+..+..++.+++|++|++++|| +|.++++++.+.+.++
T Consensus 4 ~~~~~~~v~~~i~~~~v~vy~~~~Cp-~C~~~k~~L~~~~i~~~~~dv~~~~~~~~~~~~l~~~~g~~tvP~v~i~g~~i 82 (598)
T 2x8g_A 4 ADGTSQWLRKTVDSAAVILFSKTTCP-YCKKVKDVLAEAKIKHATIELDQLSNGSAIQKCLASFSKIETVPQMFVRGKFI 82 (598)
T ss_dssp --CHHHHHHHHHHHCSEEEEECTTCH-HHHHHHHHHHHTTCCCEEEEGGGSTTHHHHHHHTHHHHSCCCSCEEEETTEEE
T ss_pred CccHHHHHHHHhccCCEEEEECCCCh-hHHHHHHHHHHCCCCcEEEEcccCcchHHHHHHHHHHhCCceeCEEEECCEEE
Confidence 45666788999999999999999999 9999998887544311
Q ss_pred -----------------------eEEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCc--------cccc---cccccc
Q psy14461 87 -----------------------AVLYLDRIGDEGILLEEELKRQTNQRRDELQERGSH--------LSFR---KKRRLY 132 (535)
Q Consensus 87 -----------------------~~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~--------~~~~---~~~l~~ 132 (535)
..++|+|||+|++|+++|..+...+.+|+|||+... +++. .+.+|.
T Consensus 83 gG~~~l~~~~~~g~L~~~l~~~~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~ 162 (598)
T 2x8g_A 83 GDSQTVLKYYSNDELAGIVNESKYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPK 162 (598)
T ss_dssp ECHHHHHHHHHTTCHHHHHHCCSSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHH
T ss_pred EeeehhhhhhhcCcchhhcccccccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCch
Confidence 135899999999999999998888999999997421 1111 001111
Q ss_pred ccc----cccchhhccc--cccccc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHhcCcEEEEeEEEEecCCEEEEc---
Q psy14461 133 YPV----AMSDLELEQD--STSALN-VTIRNWNAATKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLS--- 202 (535)
Q Consensus 133 ~~~----~i~~~~~~~~--~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~--- 202 (535)
... .+........ +..... ....+|.++.++.+..+..+...+...++..+|+++.+.+.+.+.+++.+.
T Consensus 163 ~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~~v~v~~~~ 242 (598)
T 2x8g_A 163 KLMHQAGLLSHALEDAEHFGWSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKN 242 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTT
T ss_pred HHHHHHHHHHHHHhhHHhCCccccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCCEEEEEeCC
Confidence 100 0000000000 111001 136789999999998888888777777888899999999988888888873
Q ss_pred e--eEEEcceEEEeeCceecC-CCCC--CceechhhHHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEcCcCCc
Q psy14461 203 N--RSVTGFNFLLAVERRCLP-EPRN--SALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYSRRLLK 277 (535)
Q Consensus 203 ~--~~~~~d~lViATGs~p~~-~i~G--~~v~~~~~~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~l~ 277 (535)
+ .++.||+||||||++|+. ++|| ..++++++++.+...+++++|||||++|+|+|..|+++|.+||++++..+++
T Consensus 243 g~~~~~~~d~lviAtGs~p~~p~i~G~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~ 322 (598)
T 2x8g_A 243 QKVSTITGNKIILATGERPKYPEIPGAVEYGITSDDLFSLPYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRSILLR 322 (598)
T ss_dssp CCEEEEEEEEEEECCCEEECCCSSTTHHHHCEEHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST
T ss_pred CCeEEEEeCEEEEeCCCCCCCCCCCCcccceEcHHHHhhCccCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCcCcC
Confidence 2 469999999999999999 8999 4567888888887788999999999999999999999999999999976778
Q ss_pred cCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEe-----CC---CcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCC
Q psy14461 278 HFDQEMVRILLSSLTKAGVSI-QCCVIEKVISS-----FD---GMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALN 348 (535)
Q Consensus 278 ~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~-----~~---~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~ 348 (535)
.+++++.+.+.+.|++.||++ +++.++++... .+ +.+.+++.. .+|++..+++|.|++|+|++||++++.
T Consensus 323 ~~d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~-~~g~~~~~~~D~vi~a~G~~p~~~~l~ 401 (598)
T 2x8g_A 323 GFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHY-TDGKKFEEEFETVIFAVGREPQLSKVL 401 (598)
T ss_dssp TSCHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEE-TTSCEEEEEESEEEECSCEEECGGGTB
T ss_pred cCCHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEe-CCCcEEeccCCEEEEEeCCccccCccC
Confidence 899999999999999999999 99988888642 12 444454322 367744566999999999999998876
Q ss_pred ccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEEcCCceee
Q psy14461 349 LHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGT 428 (535)
Q Consensus 349 l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~ 428 (535)
++.+|++++++|+|.||++++|+.|+|||+|||+.+.+.+++.|.+||++||.||++......++..+|+++|++|++++
T Consensus 402 ~~~~gl~~~~~G~i~vd~~~~ts~~~VyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~~~~~~~~a~ 481 (598)
T 2x8g_A 402 CETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAGATELTDYSNVATTVFTPLEYGA 481 (598)
T ss_dssp CGGGCCCBCTTSCBCCCTTSBCSSTTEEECGGGBTTSCCCHHHHHHHHHHHHHHHHHCCCCCCCCTTCCEEECSSSCEEE
T ss_pred chhcCceECCCCcEEeCCCCcCCCCCEEEEeeecCCCCccHHHHHHhHHHHHHHHhcCCCcccCCCCCcEEEECCCceEE
Confidence 67889999989999999999999999999999953668899999999999999999866566788899999999999999
Q ss_pred ecCCHHHHHHhcCCCCEEEEEEecCCcccccCCCCCcchhhhhhccCCcccccccccCcceEEEEEEEC-CCCeEEEEEE
Q psy14461 429 VGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLK-GGERVLGIHV 507 (535)
Q Consensus 429 vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~-~~~~ilGa~~ 507 (535)
||+||+||++.++..++++....+.+..+.. ..+. .+.+|+||++++ ++++|||+|+
T Consensus 482 vGl~e~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~---------------------~~~~~~kli~~~~~~~~ilG~~~ 539 (598)
T 2x8g_A 482 CGLSEEDAIEKYGDKDIEVYHSNFKPLEWTV-AHRE---------------------DNVCYMKLVCRKSDNMRVLGLHV 539 (598)
T ss_dssp EECCHHHHHHHHCGGGEEEEEEEECCTHHHH-TTCC---------------------SSCEEEEEEEETTTTTEEEEEEE
T ss_pred EeCCHHHHHhhCCCCcEEEEEEeccchhHHh-hcCC---------------------CCcEEEEEEEecCCCCEEEEEEE
Confidence 9999999998755335888777776655543 2211 357999999995 6999999999
Q ss_pred EcCchhHHHHHHHHHHHCCCCHHHHcCC
Q psy14461 508 IGQNVAGMIFGYSLALRKFLTKAELDGT 535 (535)
Q Consensus 508 ~G~~a~e~i~~~~~~i~~~~t~~~l~~~ 535 (535)
+|++|.|+|+.+++||++++|++||.++
T Consensus 540 ~g~~a~~~i~~~~~ai~~~~t~~~l~~~ 567 (598)
T 2x8g_A 540 LGPNAGEITQGYAVAIKMGATKADFDRT 567 (598)
T ss_dssp ESTTHHHHHHHHHHHHHTTCBHHHHHHS
T ss_pred ECCCHHHHHHHHHHHHHcCCCHHHHhhc
Confidence 9999999999999999999999999753
No 4
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=1.9e-60 Score=509.93 Aligned_cols=423 Identities=27% Similarity=0.357 Sum_probs=351.4
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCc---------ccccccc----ccc----ccccccchhhccc--cccc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSH---------LSFRKKR----RLY----YPVAMSDLELEQD--STSA 149 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~---------~~~~~~~----l~~----~~~~i~~~~~~~~--~~~~ 149 (535)
++|+|||+|++|+.+|+++...+.+|+|||+.+. +++. |. .|. .+........... +...
T Consensus 10 ~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~-c~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 88 (483)
T 3dgh_A 10 YDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGT-CVNVGCIPKKLMHQASLLGEAVHEAAAYGWNV 88 (483)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCH-HHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCe-ecccCchhhHHHHHHHHHHHHHHHHHhcCccc
Confidence 7899999999999999999888999999995321 2211 10 110 0000000000011 1111
Q ss_pred ccccccCHHHHHHHHHHHHHHHHHHHHHHHHhcCcEEEEeEEEEecCCEEEEc---e-eEEEcceEEEeeCceecC-CCC
Q psy14461 150 LNVTIRNWNAATKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLS---N-RSVTGFNFLLAVERRCLP-EPR 224 (535)
Q Consensus 150 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~---~-~~~~~d~lViATGs~p~~-~i~ 224 (535)
.....++|..+..+.+..++.+...+...++..+|+++.+.+.+.+++++.+. + .++.||+||||||++|.. ++|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~v~v~~~~g~~~~~~d~lviATGs~p~~p~i~ 168 (483)
T 3dgh_A 89 DDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPRYPDIP 168 (483)
T ss_dssp CCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEECCCEEECCCSST
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEccCCEEEEEeCCCeEEEEcCEEEEeCCCCcCCCCCC
Confidence 12346799999999999999888888888889999999999999999888883 2 479999999999999999 899
Q ss_pred C--CceechhhHHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEcCcCCccCcHHHHHHHHHhhhcCCeEE-cce
Q psy14461 225 N--SALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYSRRLLKHFDQEMVRILLSSLTKAGVSI-QCC 301 (535)
Q Consensus 225 G--~~v~~~~~~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~ 301 (535)
| ...+++++++.+...+++++|||+|++|+|+|..|+++|.+||+++++.+++.+++++.+.+.+.|+++||++ +++
T Consensus 169 G~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~ 248 (483)
T 3dgh_A 169 GAVEYGITSDDLFSLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLRGFDQQMAELVAASMEERGIPFLRKT 248 (483)
T ss_dssp THHHHCBCHHHHTTCSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSSTTSCHHHHHHHHHHHHHTTCCEEETE
T ss_pred CcccccCcHHHHhhhhhcCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCcccCHHHHHHHHHHHHhCCCEEEeCC
Confidence 9 5678899999988889999999999999999999999999999999976788999999999999999999999 999
Q ss_pred EEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCc
Q psy14461 302 VIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGI 381 (535)
Q Consensus 302 ~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~ 381 (535)
.+++++..+++.+.|++.+..+|+..++++|.|++|+|++|++++++++.+|+++++ |+|.||++++|+.|+|||+|||
T Consensus 249 ~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~-G~i~vd~~~~t~~~~IyA~GD~ 327 (483)
T 3dgh_A 249 VPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQK-DKIPVDSQEATNVANIYAVGDI 327 (483)
T ss_dssp EEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBT-TBBCCCTTCBCSSTTEEECSTT
T ss_pred EEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccccC-CEEEECcCCccCCCCEEEEEcc
Confidence 999998754455677776433355568999999999999999998877889999998 9999999999999999999999
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCcccccCC
Q psy14461 382 VHGKPNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDP 461 (535)
Q Consensus 382 ~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (535)
+.+.+.+++.|.+||++||+||+|......++..+|+++|++|++++||+||+||+++++...+.+....|.+..+.. +
T Consensus 328 ~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~-~ 406 (483)
T 3dgh_A 328 IYGKPELTPVAVLAGRLLARRLYGGSTQRMDYKDVATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHGYYKPTEFFI-P 406 (483)
T ss_dssp BTTSCCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEECSSSEEEEEECCHHHHHHHHCGGGEEEEEEECCCGGGTT-T
T ss_pred cCCCCccHHHHHHHHHHHHHHHcCCCCCcCCCCCCCEEEECCCccEEEeCCHHHHHhhCCCCCEEEEEEeecchhhhh-h
Confidence 745688999999999999999999776677889999999999999999999999998755335777777776654443 2
Q ss_pred CCCcchhhhhhccCCcccccccccCcceEEEEEEECC-CCeEEEEEEEcCchhHHHHHHHHHHHCCCCHHHHcCC
Q psy14461 462 LLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKG-GERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535 (535)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~-~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~~l~~~ 535 (535)
.. +.+.||+||++|++ |++|||+|++|++|.|+|+.+++||++++|++||.++
T Consensus 407 ~~---------------------~~~~~~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~ 460 (483)
T 3dgh_A 407 QK---------------------SVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINT 460 (483)
T ss_dssp TC---------------------CCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTS
T ss_pred cc---------------------CCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhc
Confidence 21 14689999999986 8999999999999999999999999999999999874
No 5
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=1.9e-60 Score=513.60 Aligned_cols=424 Identities=25% Similarity=0.340 Sum_probs=349.5
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCC--------ccccccc---cccc----ccccccchhhccc--cccccc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGS--------HLSFRKK---RRLY----YPVAMSDLELEQD--STSALN 151 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~--------~~~~~~~---~l~~----~~~~i~~~~~~~~--~~~~~~ 151 (535)
++|+|||+|++|+.+|+++...+.+|+|||+.+ .+++... -+|. .+........... +.....
T Consensus 33 ~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~~~ 112 (519)
T 3qfa_A 33 YDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVEE 112 (519)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCcccCC
Confidence 789999999999999999988899999999854 2222100 0110 0000000000011 111112
Q ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHHhcCcEEEEeEEEEecCCEEEEce-----eEEEcceEEEeeCceecC-CCCC
Q psy14461 152 VTIRNWNAATKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLSN-----RSVTGFNFLLAVERRCLP-EPRN 225 (535)
Q Consensus 152 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~~-----~~~~~d~lViATGs~p~~-~i~G 225 (535)
...++|..+..+++++++.+...+...++..+|+++.+.+.+.+++++.+.. .++.||+||||||++|+. ++||
T Consensus 113 ~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~p~~p~i~G 192 (519)
T 3qfa_A 113 TVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPG 192 (519)
T ss_dssp SCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCCCEEEEEEEEECCCEEECCCCCTT
T ss_pred cCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEcCCCCEEEEECCEEEEECCCCcCCCCCCC
Confidence 3478999999999999999988888888999999999999999999888842 379999999999999999 9999
Q ss_pred --CceechhhHHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEcCcCCccCcHHHHHHHHHhhhcCCeEE-cceE
Q psy14461 226 --SALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYSRRLLKHFDQEMVRILLSSLTKAGVSI-QCCV 302 (535)
Q Consensus 226 --~~v~~~~~~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~ 302 (535)
+.++++++++.+...+++++|||+|++|+|+|..|+++|.+||+++++.+++.+++++.+.+.+.|+++||++ +++.
T Consensus 193 ~~~~~~t~~~~~~l~~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l~~~d~~~~~~~~~~l~~~GV~v~~~~~ 272 (519)
T 3qfa_A 193 DKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFV 272 (519)
T ss_dssp HHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEESEE
T ss_pred ccCceEcHHHHhhhhhcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecccccccCCHHHHHHHHHHHHHCCCEEEeCCe
Confidence 5678999999998899999999999999999999999999999999977889999999999999999999999 9998
Q ss_pred EEEEEEeCC---CcEEEEEecCCCC-CceEEEcCEEEEccCCCCCCCCCCccccCeeec-CCCceEcCCCCCcCCCCEEE
Q psy14461 303 IEKVISSFD---GMKGVRGFHPESK-EPFADVFKTVVNAMEKKFDFAALNLHHIGVDIK-KKSYVVCNEKDQTSVGNIFA 377 (535)
Q Consensus 303 v~~i~~~~~---~~~~v~~~~~~~G-~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~-~~G~i~vd~~~~T~~~~IyA 377 (535)
++++...++ +.+.+++.. .+| +..++++|.|++|+|++||+++++++.+|++++ ++|+|.||+++||+.|+|||
T Consensus 273 v~~v~~~~~~~~~~~~v~~~~-~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~Vd~~~~Ts~~~IyA 351 (519)
T 3qfa_A 273 PIKVEQIEAGTPGRLRVVAQS-TNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIYA 351 (519)
T ss_dssp EEEEEEEECCTTCEEEEEEEE-SSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCCBCCCTTSBCSSTTEEE
T ss_pred EEEEEEccCCCCceEEEEEEE-CCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCeEeeCCCCccCCCCEEE
Confidence 888875422 345565543 244 335689999999999999999877788999998 68999999999999999999
Q ss_pred eCCcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCccc
Q psy14461 378 VGGIVHGKPNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDN 457 (535)
Q Consensus 378 ~GD~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~ 457 (535)
+|||+.+.+++++.|..||++||+||++......++..+|+++|++|++++||+||+||+++++..++.+....|.+..+
T Consensus 352 ~GD~~~g~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~ 431 (519)
T 3qfa_A 352 IGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFWPLEW 431 (519)
T ss_dssp CGGGBSSSCCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEECSSSCEEEEECCHHHHHHHHCGGGEEEEEEEECCHHH
T ss_pred EEeccCCCCccHHHHHHHHHHHHHHHcCCCCccCCCCcCcEEEECCCceEEecCCHHHHHhhCCCCCEEEEEEeccchhh
Confidence 99998456889999999999999999987766778999999999999999999999999987543357777777766555
Q ss_pred ccCCCCCcchhhhhhccCCcccccccccCcceEEEEEEEC-CCCeEEEEEEEcCchhHHHHHHHHHHHCCCCHHHHcCC
Q psy14461 458 LLDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLK-GGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535 (535)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~-~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~~l~~~ 535 (535)
.. ..+. .+.||+||++|+ +|++|||+|++|++|.|+|+.+++||++++|++||.++
T Consensus 432 ~~-~~~~---------------------~~~g~~Kli~~~~~~~~ilGa~i~g~~a~e~i~~~~~ai~~~~t~~~l~~~ 488 (519)
T 3qfa_A 432 TI-PSRD---------------------NNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDST 488 (519)
T ss_dssp HT-TTCC---------------------TTTEEEEEEEETTTTCEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHS
T ss_pred hh-hccC---------------------CCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcc
Confidence 43 2211 368999999997 58999999999999999999999999999999999753
No 6
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=1.9e-59 Score=501.48 Aligned_cols=423 Identities=24% Similarity=0.348 Sum_probs=349.4
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccccccc--c-ccc----ccccccchhhccccccc-ccccccCHHH
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKK--R-RLY----YPVAMSDLELEQDSTSA-LNVTIRNWNA 159 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~--~-l~~----~~~~i~~~~~~~~~~~~-~~~~~~~~~~ 159 (535)
.++|+|||+|++|+.+|+.+...+.+|+|||++. +++... + .|. ..............+.. .....++|..
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~-~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 98 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAELGARAAVVESHK-LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNWRV 98 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCCHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccCHHH
Confidence 4689999999999999999988899999999874 322100 0 110 00000000000001100 1134678999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcEEEEeEEEEecCC--EEEEceeEEEcceEEEeeCceecC----CCCC-Cceechh
Q psy14461 160 ATKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFTNPH--TIKLSNRSVTGFNFLLAVERRCLP----EPRN-SALISAD 232 (535)
Q Consensus 160 l~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~--~v~~~~~~~~~d~lViATGs~p~~----~i~G-~~v~~~~ 232 (535)
+..+.+.+.+.+...+...++..+|+++.+++.+.+.. ++..++.++.||+||||||++|.. ++|| +.+++++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~g~~~~~d~lviAtG~~p~~p~~~~i~G~~~~~~~~ 178 (478)
T 3dk9_A 99 IKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEVSGKKYTAPHILIATGGMPSTPHESQIPGASLGITSD 178 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCSSCEEEETTEEEECSCEEECCCEEECCCCTTTSTTGGGSBCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCCeEEEEECCEEEEeeEEEEccCCCCCCCCcCCCCCCceeEchH
Confidence 99999999999888888888999999999999887754 566666789999999999999875 3677 6678899
Q ss_pred hHHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeC
Q psy14461 233 DLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVISSF 310 (535)
Q Consensus 233 ~~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~ 310 (535)
+++.+...+++++|||||++|+|+|..|+++|.+||++++ +++++.+++++.+.+.+.|+++||++ +++.+++++..+
T Consensus 179 ~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~ 258 (478)
T 3dk9_A 179 GFFQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTL 258 (478)
T ss_dssp HHTTCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEETTEEEEEEEECS
T ss_pred HhhchhhcCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcC
Confidence 9999988999999999999999999999999999999999 99999999999999999999999999 999999998763
Q ss_pred CC-cEEEEEecCCCCCc--eEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCCCCC
Q psy14461 311 DG-MKGVRGFHPESKEP--FADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPN 387 (535)
Q Consensus 311 ~~-~~~v~~~~~~~G~~--~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~~~ 387 (535)
++ .+.+.+.+..+|++ .++++|.|++|+|++||++.+.++.+|++++++|+|.||++++|+.|+|||+|||+ +.++
T Consensus 259 ~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD~~-~~~~ 337 (478)
T 3dk9_A 259 SGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVC-GKAL 337 (478)
T ss_dssp SSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCCTTCBCSSTTEEECGGGG-CSSC
T ss_pred CCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeCCCcccCCCCEEEEEecC-CCCc
Confidence 34 35666643112332 47999999999999999997767889999999999999999999999999999999 8999
Q ss_pred cHHHHHHHHHHHHHHHhCC-CCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCcccccCCCCCcc
Q psy14461 388 NASMAAISARLIIERLYGM-QDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPEN 466 (535)
Q Consensus 388 ~~~~A~~~g~~aa~~i~g~-~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (535)
+++.|.+||++||+||++. .....++..+|+++|++|++++||+||+||+++++..++.+...++....++. ..
T Consensus 338 ~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~-~~---- 412 (478)
T 3dk9_A 338 LTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAV-TK---- 412 (478)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTCCCCCTTCCEEECCSSCEEEEECCHHHHHHHHCGGGEEEEEEEECCGGGGG-CS----
T ss_pred cHhHHHHHHHHHHHHHcCCCCcccCCCCCCCeEEECCCceEEeeCCHHHHHhhCCCccEEEEEeecCcchhhh-hc----
Confidence 9999999999999999987 34567888999999999999999999999999865335777777777666554 21
Q ss_pred hhhhhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCCCHHHHcCC
Q psy14461 467 FVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535 (535)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~~l~~~ 535 (535)
+++.||+||++|++|++|||+|++|++|.|+|+.+++||++++|++||.++
T Consensus 413 ------------------~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~ 463 (478)
T 3dk9_A 413 ------------------RKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNT 463 (478)
T ss_dssp ------------------SCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTS
T ss_pred ------------------CCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhc
Confidence 257899999999999999999999999999999999999999999999874
No 7
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=5.5e-60 Score=507.17 Aligned_cols=417 Identities=22% Similarity=0.248 Sum_probs=349.5
Q ss_pred EEEEEeeCCccHHHHHHHHHhh-CCCeEEEEec--------CCccccccc--c-cc----cccccccchhhccccccc-c
Q psy14461 88 VLYLDRIGDEGILLEEELKRQT-NQRRDELQER--------GSHLSFRKK--R-RL----YYPVAMSDLELEQDSTSA-L 150 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~-~~~~V~lie~--------~~~~~~~~~--~-l~----~~~~~i~~~~~~~~~~~~-~ 150 (535)
.++|+|||+|++|+.+|.++.. .+.+|+|||+ ...+++... + +| .+...+.......+.+.. .
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~ 86 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEF 86 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCccc
Confidence 4789999999999999998888 8999999992 333322100 0 11 100000000000111110 1
Q ss_pred ccc--ccCHHHHHHHHHHHHHHHHHHHHHHHHhc-CcEEEEeEEEEecCCEEEEc---------eeEEEcceEEEeeCce
Q psy14461 151 NVT--IRNWNAATKLIKRFCIRAKNDSMRELKAL-GIDIVRTAAAFTNPHTIKLS---------NRSVTGFNFLLAVERR 218 (535)
Q Consensus 151 ~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-gV~~~~g~~~~~~~~~v~~~---------~~~~~~d~lViATGs~ 218 (535)
... .++|..+.++.++.++++...+...++.. +|+++.+++.++++++|.+. +.++.||+||||||++
T Consensus 87 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~~~~~~~~~~d~lViATGs~ 166 (495)
T 2wpf_A 87 DGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLATGSW 166 (495)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECCCEE
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEeeCCEEEEeecCCccCCCCeEEEcCEEEEeCCCC
Confidence 122 67899999999999998888888888888 99999999999999999986 5679999999999999
Q ss_pred ecC-CCCC-CceechhhHHhccCCCCcEEEECCChHHHHHHHHHHhC---CCcEEEEEc-CcCCccCcHHHHHHHHHhhh
Q psy14461 219 CLP-EPRN-SALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFL---GVPVTLVYS-RRLLKHFDQEMVRILLSSLT 292 (535)
Q Consensus 219 p~~-~i~G-~~v~~~~~~~~~~~~~k~vvViGgG~~g~e~A~~l~~~---g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~ 292 (535)
|.. ++|| +.++++++++.+...+++++|||+|++|+|+|..|+++ |.+||++++ +++++.+++++.+.+.+.++
T Consensus 167 p~~p~i~G~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~ 246 (495)
T 2wpf_A 167 PQMPAIPGIEHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREEVTKQLT 246 (495)
T ss_dssp ECCCCCTTGGGCEEHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTTSCHHHHHHHHHHHH
T ss_pred cCCCCCCCccccccHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccccCHHHHHHHHHHHH
Confidence 999 8999 77889999999888899999999999999999999999 999999999 99999999999999999999
Q ss_pred cCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcC
Q psy14461 293 KAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTS 371 (535)
Q Consensus 293 ~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~ 371 (535)
++||++ ++++|++++.++++.+.|++. +|+ ++++|.|++|+|++||++++.++.+|++++++|+|.||+++||+
T Consensus 247 ~~GV~i~~~~~v~~i~~~~~~~~~v~~~---~G~--~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~Vd~~~~t~ 321 (495)
T 2wpf_A 247 ANGIEIMTNENPAKVSLNTDGSKHVTFE---SGK--TLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRTN 321 (495)
T ss_dssp HTTCEEEESCCEEEEEECTTSCEEEEET---TSC--EEEESEEEECSCEEECCGGGTGGGTTCCBCTTSSBCCCTTCBCS
T ss_pred hCCCEEEeCCEEEEEEEcCCceEEEEEC---CCc--EEEcCEEEECCCCcccccccchhhcCccCCCCCCEEECCCCccC
Confidence 999999 999999998753334667773 676 79999999999999999866568889999989999999999999
Q ss_pred CCCEEEeCCcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEe
Q psy14461 372 VGNIFAVGGIVHGKPNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSS 451 (535)
Q Consensus 372 ~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~ 451 (535)
.|+|||+|||+ +.+.+++.|.+||++||.||++......++..+|+++|++|++++||+||+||++.+. ++.+....
T Consensus 322 ~~~IyA~GD~~-~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~--~~~v~~~~ 398 (495)
T 2wpf_A 322 VPNIYAIGDIT-DRLMLTPVAINEGAALVDTVFGNKPRKTDHTRVASAVFSIPPIGTCGLIEEVAAKEFE--KVAVYMSS 398 (495)
T ss_dssp STTEEECGGGG-CSCCCHHHHHHHHHHHHHHHHSSCCCCCCCSSCEEEECCSSCEEEEECCHHHHHHHSS--EEEEEEEE
T ss_pred CCCEEEEeccC-CCccCHHHHHHHHHHHHHHhcCCCCCcCCCCCCCEEEECCCCeEEEeCCHHHHHhcCC--CEEEEEEe
Confidence 99999999999 7788999999999999999998665667888999999999999999999999998742 67777777
Q ss_pred cCCcccccCCCCCcchhhhhhccCCcccccccccCcceE-EEEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCCCHH
Q psy14461 452 YPTFDNLLDPLLPENFVKLVCLKGGERVLGIHVIGQNNF-VKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKA 530 (535)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~ 530 (535)
+....+++ +.. ++.+| +||++|+++++|||+|++|++|.|+|+.+++||++++|++
T Consensus 399 ~~~~~~~~-~~~----------------------~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~ 455 (495)
T 2wpf_A 399 FTPLMHNI-SGS----------------------KYKKFVAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKIS 455 (495)
T ss_dssp ECCTHHHH-HSC----------------------TTCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHH
T ss_pred cCchhhhh-hcC----------------------CCcEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHH
Confidence 76655443 221 46899 9999999999999999999999999999999999999999
Q ss_pred HHcCC
Q psy14461 531 ELDGT 535 (535)
Q Consensus 531 ~l~~~ 535 (535)
||.++
T Consensus 456 ~l~~~ 460 (495)
T 2wpf_A 456 DFYNT 460 (495)
T ss_dssp HHHHS
T ss_pred HHhhc
Confidence 99753
No 8
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=1.1e-59 Score=499.48 Aligned_cols=417 Identities=23% Similarity=0.327 Sum_probs=350.6
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccc----cccc----cccccchhh-cccccc-cccccccCH
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKR----RLYY----PVAMSDLEL-EQDSTS-ALNVTIRNW 157 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~----l~~~----~~~i~~~~~-~~~~~~-~~~~~~~~~ 157 (535)
.++|+|||+|++|+.+|.++...+.+|+|||++. +++. |. +|.. ......... ..+.+. ......++|
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~-~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~~~ 81 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE-LGGT-CVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNW 81 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC-TTHH-HHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC-CCCc-ccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCccCH
Confidence 3789999999999999999888899999999984 3221 11 1111 000000000 011110 011246789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcEEEEeEEEEecCCEEEEceeEEEcceEEEeeCceecC-CCCC-CceechhhHH
Q psy14461 158 NAATKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLSNRSVTGFNFLLAVERRCLP-EPRN-SALISADDLF 235 (535)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~~~~~~~d~lViATGs~p~~-~i~G-~~v~~~~~~~ 235 (535)
..+..+.+....++...+...++..+|+++.+++.+++.++|.+++.++.||+||||||++|.. ++|| +.++++++++
T Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~~~g~~~~~d~lviAtGs~p~~p~i~g~~~~~~~~~~~ 161 (450)
T 1ges_A 82 ETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEVNGETITADHILIATGGRPSHPDIPGVEYGIDSDGFF 161 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEETTEEEETTEEEEEEEEEECCCEEECCCCSTTGGGSBCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEECCEEEEeCEEEECCCCCCCCCCCCCccceecHHHhh
Confidence 9999999988888888888888889999999998888888898866789999999999999998 8999 7788999999
Q ss_pred hccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCc
Q psy14461 236 RLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGM 313 (535)
Q Consensus 236 ~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~ 313 (535)
.+...+++++|||||++|+|+|..|+++|.+|+++++ +.+++.+++++.+.+.+.+++.||++ +++++++++.++++.
T Consensus 162 ~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~ 241 (450)
T 1ges_A 162 ALPALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGS 241 (450)
T ss_dssp HCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSC
T ss_pred hhhhcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhhhhHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcE
Confidence 9888899999999999999999999999999999999 89999999999999999999999999 999999998753334
Q ss_pred EEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCCCCCcHHHHH
Q psy14461 314 KGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAA 393 (535)
Q Consensus 314 ~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~~~~~~~A~ 393 (535)
+.|++. +|+ ++++|.|++|+|++||++++.++.+|++++++|+|.||+++||+.|+|||+|||+ +.+.+++.|.
T Consensus 242 ~~v~~~---~g~--~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~~~t~~~~IyA~GD~~-~~~~~~~~A~ 315 (450)
T 1ges_A 242 LTLELE---DGR--SETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGDNT-GAVELTPVAV 315 (450)
T ss_dssp EEEEET---TSC--EEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECSGGG-TSCCCHHHHH
T ss_pred EEEEEC---CCc--EEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeECCCCccCCCCEEEEeccC-CCCccHHHHH
Confidence 667773 676 7999999999999999986656788999999999999999999999999999999 7889999999
Q ss_pred HHHHHHHHHHhCCCCCC-CCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCcccccCCCCCcchhhhhh
Q psy14461 394 ISARLIIERLYGMQDQL-MDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVC 472 (535)
Q Consensus 394 ~~g~~aa~~i~g~~~~~-~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (535)
+||++||.||++..... .++..+|+++|++|++++||+||+||++.+|..++.+...++....+.. ..
T Consensus 316 ~~g~~aa~~i~~~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~~g~~~~~~~~~~~~~~~~~~-~~---------- 384 (450)
T 1ges_A 316 AAGRRLSERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTAMYTAV-TT---------- 384 (450)
T ss_dssp HHHHHHHHHHHTTCTTCCCCCSSCCEEECCSSCEEEEECCHHHHHHHHCGGGEEEEEEEEECHHHHT-SS----------
T ss_pred HHHHHHHHHHcCCCCcccCCCCCCCeEEECCCceEEEeCCHHHHHhcCCCCcEEEEEEECchhhHHH-hc----------
Confidence 99999999999865444 6788899999999999999999999998754236888777776665543 11
Q ss_pred ccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCCCHHHHcCC
Q psy14461 473 LKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535 (535)
Q Consensus 473 ~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~~l~~~ 535 (535)
+.+.+|+|+++|+++++|||+|++|++|.|+|+.+++||++++|++||.++
T Consensus 385 ------------~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~ 435 (450)
T 1ges_A 385 ------------HRQPCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNT 435 (450)
T ss_dssp ------------SCCEEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTS
T ss_pred ------------CCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcC
Confidence 146899999999999999999999999999999999999999999999874
No 9
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.8e-59 Score=499.73 Aligned_cols=414 Identities=23% Similarity=0.305 Sum_probs=351.7
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccccccc---cccc----ccccccchhhccccccc-ccccccCHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKK---RRLY----YPVAMSDLELEQDSTSA-LNVTIRNWNAA 160 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~---~l~~----~~~~i~~~~~~~~~~~~-~~~~~~~~~~l 160 (535)
++|+|||+|++|+.+|+.+...+.+|+|||++ .+++... .+|. .+..........+.+.. .....++|..+
T Consensus 6 ~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~-~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 84 (463)
T 4dna_A 6 YDLFVIGGGSGGVRSGRLAAALGKKVAIAEEF-RYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDWAKL 84 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECHHHH
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCEEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCHHHH
Confidence 68999999999999999998889999999994 3332110 0110 00000001111111111 12346799999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCcEEEEeEEEEecCCEEEE--ceeEEEcceEEEeeCceec-C-CCCC-CceechhhHH
Q psy14461 161 TKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKL--SNRSVTGFNFLLAVERRCL-P-EPRN-SALISADDLF 235 (535)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~--~~~~~~~d~lViATGs~p~-~-~i~G-~~v~~~~~~~ 235 (535)
..+.+.....+...+...++..+|+++.+++.+.+++++.+ ++..+.||+||||||++|. . ++|| +.++++++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~~~~~~~~~~d~lviAtG~~p~~~p~i~G~~~~~~~~~~~ 164 (463)
T 4dna_A 85 VAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGPNTVKLLASGKTVTAERIVIAVGGHPSPHDALPGHELCITSNEAF 164 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTTEEEEEEEEEECCCEEECCCTTSTTGGGCBCHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEecCCeEEEeCEEEEecCCCcccCCCCCCccccccHHHHh
Confidence 99999888888888888888899999999999999999999 5588999999999999999 8 8999 7788999999
Q ss_pred hccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCc
Q psy14461 236 RLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGM 313 (535)
Q Consensus 236 ~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~ 313 (535)
.+...+++++|||+|++|+|+|..|++.|.+|+++++ +++++.+++++.+.+.+.+++.||++ +++.|++++.++++.
T Consensus 165 ~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~ 244 (463)
T 4dna_A 165 DLPALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRILCEDIIQSVSADADGR 244 (463)
T ss_dssp TCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSC
T ss_pred hhhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCE
Confidence 9888899999999999999999999999999999999 99999999999999999999999999 999999998763343
Q ss_pred EEEE-EecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCCCCCcHHHH
Q psy14461 314 KGVR-GFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMA 392 (535)
Q Consensus 314 ~~v~-~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~~~~~~~A 392 (535)
+.|+ + .+|+ +++|.|++|+|++|++.+++++..|++++++|+|.||+++||+.|+|||+|||+ +.+++++.|
T Consensus 245 ~~v~~~---~~g~---i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~iya~GD~~-~~~~~~~~A 317 (463)
T 4dna_A 245 RVATTM---KHGE---IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDAFSRTSTPGIYALGDVT-DRVQLTPVA 317 (463)
T ss_dssp EEEEES---SSCE---EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCCTTCBCSSTTEEECSGGG-SSCCCHHHH
T ss_pred EEEEEc---CCCe---EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeECcCCCCCCCCEEEEEecC-CCCCChHHH
Confidence 5666 5 3563 899999999999999998767889999999999999999999999999999999 889999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCcccccCCCCCcchhhhhh
Q psy14461 393 AISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVC 472 (535)
Q Consensus 393 ~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (535)
..||++||+||++......++..+|+++|++|++++||+||+||++++. ++.+...++....++. ..
T Consensus 318 ~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vG~te~~a~~~~~--~~~~~~~~~~~~~~~~-~~---------- 384 (463)
T 4dna_A 318 IHEAMCFIETEYKNNPTSPDHDLIATAVFSQPEIGTVGITEEEAARKFQ--EIEVYRAEFRPMKATL-SG---------- 384 (463)
T ss_dssp HHHHHHHHHHHHSSCCCCCCCSCCCEEECSSSCEEEEECCHHHHHHHSS--EEEEEEEEECCTTHHH-HC----------
T ss_pred HHHHHHHHHHHcCCCCcccCCCCCCEEEECCCCeEEecCCHHHHHHcCC--CeEEEEEeccccchhh-cC----------
Confidence 9999999999999766667888999999999999999999999999853 6888777776655543 11
Q ss_pred ccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCCCHHHHcCC
Q psy14461 473 LKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535 (535)
Q Consensus 473 ~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~~l~~~ 535 (535)
+.+.||+||++|++|++|||+|++|++|.|+|+.+++||++++|++||.++
T Consensus 385 ------------~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~ 435 (463)
T 4dna_A 385 ------------RKEKTIMKLVVNAADRKVVGAHILGHDAGEMAQLLGISLRAGCTKDDFDRT 435 (463)
T ss_dssp ------------CCCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTS
T ss_pred ------------CCceEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhc
Confidence 257899999999999999999999999999999999999999999999874
No 10
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.2e-59 Score=500.44 Aligned_cols=418 Identities=20% Similarity=0.181 Sum_probs=351.1
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccccccc---cccccc----ccccch-hhcccccc-cccccccCHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKK---RRLYYP----VAMSDL-ELEQDSTS-ALNVTIRNWNA 159 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~---~l~~~~----~~i~~~-~~~~~~~~-~~~~~~~~~~~ 159 (535)
++|+|||+|++|+.+|+.+...+.+|+|||+.+.+++... .+|... ...... ...+..+. ......++|..
T Consensus 26 ~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 105 (491)
T 3urh_A 26 YDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKLNLQK 105 (491)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEECHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCccCHHH
Confidence 5789999999999999999888999999999876644210 011100 000000 00011111 11245678999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcEEEEeEEEEecCCEEEEce-----eEEEcceEEEeeCceecCCCCC-------Cc
Q psy14461 160 ATKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLSN-----RSVTGFNFLLAVERRCLPEPRN-------SA 227 (535)
Q Consensus 160 l~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~~-----~~~~~d~lViATGs~p~~~i~G-------~~ 227 (535)
+..+.+.....+...+...++..+|+++.+++.+.+++++.+.. .++.||+||||||++|.. +|| ..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p~~-ipg~~~~~~~~~ 184 (491)
T 3urh_A 106 MMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDVAG-IPGVEVAFDEKT 184 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECSSSEEEEECTTSCEEEEECSEEEECCCEECCC-BTTBCCCCCSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEeCCCceEEEEeCEEEEccCCCCCC-CCCcccccCCee
Confidence 99999999999888888889999999999999999988888752 579999999999999764 333 45
Q ss_pred eechhhHHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEE
Q psy14461 228 LISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEK 305 (535)
Q Consensus 228 v~~~~~~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~ 305 (535)
++++++++.+...+++++|||||++|+|+|..|+++|.+||++++ +++++.+++++.+.+.+.+++.||++ +++++++
T Consensus 185 ~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gV~v~~~~~v~~ 264 (491)
T 3urh_A 185 IVSSTGALALEKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKLGAKVTG 264 (491)
T ss_dssp EECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEE
T ss_pred EEehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccccCCHHHHHHHHHHHHhCCCEEEECCeEEE
Confidence 789999998888899999999999999999999999999999999 99999999999999999999999999 9999999
Q ss_pred EEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCCC
Q psy14461 306 VISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGK 385 (535)
Q Consensus 306 i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~ 385 (535)
++.+ ++.+.+++.+..+|+..++++|.|++|+|++|++++++++..+++++++|+|.||+++||+.|+|||+|||+ +.
T Consensus 265 i~~~-~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD~~-~~ 342 (491)
T 3urh_A 265 AVKS-GDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRHFQTSIAGVYAIGDVV-RG 342 (491)
T ss_dssp EEEE-TTEEEEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCTTCBCSSTTEEECGGGS-SS
T ss_pred EEEe-CCEEEEEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECCCCCCCCCCEEEEEecC-CC
Confidence 9876 466677776423365568999999999999999998777888999999999999999999999999999999 88
Q ss_pred CCcHHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCcccccCCCCCc
Q psy14461 386 PNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPE 465 (535)
Q Consensus 386 ~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (535)
+++++.|..||++||+||+|.. ..+++..+|+++|++|++++||+||+||++++. ++.+...++....++. .
T Consensus 343 ~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~g~--~~~~~~~~~~~~~~~~-~---- 414 (491)
T 3urh_A 343 PMLAHKAEDEGVAVAEIIAGQA-GHVNYDVIPGVVYTQPEVASVGKTEEELKAAGV--AYKIGKFPFTANGRAR-A---- 414 (491)
T ss_dssp CCCHHHHHHHHHHHHHHHTTSC-CCCCTTCCCEEECSSSCEEEEECCHHHHHHTTC--CEEEEEEEGGGCHHHH-H----
T ss_pred ccchhHHHHHHHHHHHHHcCCC-cccCCCCCCEEEEccCCeEEEeCCHHHHHhCCC--CEEEEEEecCcchhhh-c----
Confidence 9999999999999999999865 456788899999999999999999999999843 7888877776665543 1
Q ss_pred chhhhhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCCCHHHHcCC
Q psy14461 466 NFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535 (535)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~~l~~~ 535 (535)
.+++.||+||++|++|++|||+|++|++|.|+|+.+++||++++|++||.++
T Consensus 415 ------------------~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~ 466 (491)
T 3urh_A 415 ------------------MLQTDGFVKILADKETDRVLGGHIIGFGAGEMIHEIAVLMEFGGSSEDLGRT 466 (491)
T ss_dssp ------------------TTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTS
T ss_pred ------------------CCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcC
Confidence 1256899999999999999999999999999999999999999999999874
No 11
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=1.8e-59 Score=502.65 Aligned_cols=416 Identities=20% Similarity=0.270 Sum_probs=348.8
Q ss_pred EEEEeeCCccHHHHHHHHHhh-CCCeEEEEec--------CCccccccc--c-ccc----ccccccchhhccccccc-cc
Q psy14461 89 LYLDRIGDEGILLEEELKRQT-NQRRDELQER--------GSHLSFRKK--R-RLY----YPVAMSDLELEQDSTSA-LN 151 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~-~~~~V~lie~--------~~~~~~~~~--~-l~~----~~~~i~~~~~~~~~~~~-~~ 151 (535)
++|+|||+|++|+.+|+++.. .+.+|+|||+ ...+++... + +|. +...+.........+.. ..
T Consensus 4 ~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~ 83 (490)
T 1fec_A 4 YDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWELD 83 (490)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEECC
T ss_pred ccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCcccC
Confidence 689999999999999998888 8899999992 333332210 0 111 10000000001111111 01
Q ss_pred cc--ccCHHHHHHHHHHHHHHHHHHHHHHHHhc-CcEEEEeEEEEecCCEEEE------ce---eEEEcceEEEeeCcee
Q psy14461 152 VT--IRNWNAATKLIKRFCIRAKNDSMRELKAL-GIDIVRTAAAFTNPHTIKL------SN---RSVTGFNFLLAVERRC 219 (535)
Q Consensus 152 ~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-gV~~~~g~~~~~~~~~v~~------~~---~~~~~d~lViATGs~p 219 (535)
.. .++|..+.++.++....+...+...++.. ||+++.+++.+++++++.+ ++ .++.||+||||||++|
T Consensus 84 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~g~~~~~~~~d~lviAtGs~p 163 (490)
T 1fec_A 84 RESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETLDTEYILLATGSWP 163 (490)
T ss_dssp GGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECCCEEE
T ss_pred CcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeCCEEEEEeeccCCCCceEEEEcCEEEEeCCCCC
Confidence 12 57899999999999988888888888888 9999999999999999888 34 6799999999999999
Q ss_pred cC-CCCC-CceechhhHHhccCCCCcEEEECCChHHHHHHHHHHhC---CCcEEEEEc-CcCCccCcHHHHHHHHHhhhc
Q psy14461 220 LP-EPRN-SALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFL---GVPVTLVYS-RRLLKHFDQEMVRILLSSLTK 293 (535)
Q Consensus 220 ~~-~i~G-~~v~~~~~~~~~~~~~k~vvViGgG~~g~e~A~~l~~~---g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~ 293 (535)
.. ++|| +.++++++++.+...+++++|||||++|+|+|..|+++ |.+||++++ +++++.+++++.+.+.+.+++
T Consensus 164 ~~p~i~g~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~ 243 (490)
T 1fec_A 164 QHLGIEGDDLCITSNEAFYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELRKQLTEQLRA 243 (490)
T ss_dssp CCCCSBTGGGCBCHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHH
T ss_pred CCCCCCCccceecHHHHhhhhhcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccccCHHHHHHHHHHHHh
Confidence 98 8999 77889999999888899999999999999999999999 999999999 999999999999999999999
Q ss_pred CCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCC
Q psy14461 294 AGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSV 372 (535)
Q Consensus 294 ~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~ 372 (535)
.||++ ++++|++++.++++.+.|++ .+|+ ++++|.|++|+|++||++.|.++.+|++++++|+|.||+++||+.
T Consensus 244 ~GV~i~~~~~v~~i~~~~~~~~~v~~---~~G~--~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~I~Vd~~~~t~~ 318 (490)
T 1fec_A 244 NGINVRTHENPAKVTKNADGTRHVVF---ESGA--EADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAYSKTNV 318 (490)
T ss_dssp TTEEEEETCCEEEEEECTTSCEEEEE---TTSC--EEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBCSS
T ss_pred CCCEEEeCCEEEEEEEcCCCEEEEEE---CCCc--EEEcCEEEEccCCCcCccccCchhcCccCCCCCCEEECCCCccCC
Confidence 99999 99999999875333467776 3676 799999999999999998665688899999899999999999999
Q ss_pred CCEEEeCCcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEec
Q psy14461 373 GNIFAVGGIVHGKPNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSY 452 (535)
Q Consensus 373 ~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~ 452 (535)
|+|||+|||+ +.+++++.|.+||++||.||++......++..+|+++|++|++++||+||+||++.+. ++.+...++
T Consensus 319 ~~IyA~GD~~-~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~~~--~~~~~~~~~ 395 (490)
T 1fec_A 319 DNIYAIGDVT-DRVMLTPVAINEGAAFVDTVFANKPRATDHTKVACAVFSIPPMGVCGYVEEDAAKKYD--QVAVYESSF 395 (490)
T ss_dssp TTEEECGGGG-CSCCCHHHHHHHHHHHHHHHHSSCCCCCCCSSCCEEECCSSCEEEEECCHHHHHHHCS--EEEEEEEEE
T ss_pred CCEEEEeccC-CCccCHHHHHHHHHHHHHHhcCCCCCcCCCCCccEEEECCCCeEEEeCCHHHHHhcCC--CEEEEEeec
Confidence 9999999999 7788999999999999999998665667888999999999999999999999998843 677777777
Q ss_pred CCcccccCCCCCcchhhhhhccCCcccccccccCcceEE-EEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCCCHHH
Q psy14461 453 PTFDNLLDPLLPENFVKLVCLKGGERVLGIHVIGQNNFV-KLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAE 531 (535)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~~ 531 (535)
....+.+ +.. .+.+|+ ||++|+++++|||+|++|++|.|+|+.+++||++++|++|
T Consensus 396 ~~~~~~~-~~~----------------------~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~ 452 (490)
T 1fec_A 396 TPLMHNI-SGS----------------------TYKKFMVRIVTNHADGEVLGVHMLGDSSPEIIQSVAICLKMGAKISD 452 (490)
T ss_dssp CCHHHHH-HSC----------------------TTCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHH
T ss_pred Chhhhhh-hcC----------------------CCeEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHH
Confidence 6655443 221 468999 9999999999999999999999999999999999999999
Q ss_pred HcCC
Q psy14461 532 LDGT 535 (535)
Q Consensus 532 l~~~ 535 (535)
|.++
T Consensus 453 l~~~ 456 (490)
T 1fec_A 453 FYNT 456 (490)
T ss_dssp HHTS
T ss_pred Hhcc
Confidence 9864
No 12
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=1.2e-58 Score=495.76 Aligned_cols=418 Identities=18% Similarity=0.190 Sum_probs=345.1
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccc---cccccccc----cccchhhcccccc-cccccccCHHH
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRK---KRRLYYPV----AMSDLELEQDSTS-ALNVTIRNWNA 159 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~---~~l~~~~~----~i~~~~~~~~~~~-~~~~~~~~~~~ 159 (535)
.++|+|||+|++|+.+|+.+...+.+|+|||+++.+++.. +.+|.... .+........... ......++|..
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~~~ 85 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDM 85 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCHHH
Confidence 4789999999999999999888899999999977654221 01111000 0000000000000 01234578999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcEEEEeEEEEecCCEEEEc---e------------eEEEcceEEEeeCceecC-C-
Q psy14461 160 ATKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLS---N------------RSVTGFNFLLAVERRCLP-E- 222 (535)
Q Consensus 160 l~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~---~------------~~~~~d~lViATGs~p~~-~- 222 (535)
+..+.......+...+...++..||+++.+++.+.+++++.+. + .+++||+||||||++|.. +
T Consensus 86 ~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~~~~~ 165 (482)
T 1ojt_A 86 LRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTKLPF 165 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEECCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCCCCCC
Confidence 9998888888887777788888999999999888888877773 3 579999999999999987 6
Q ss_pred CCC-CceechhhHHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-c
Q psy14461 223 PRN-SALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-Q 299 (535)
Q Consensus 223 i~G-~~v~~~~~~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~ 299 (535)
++. ..++++++++.+...+++++|||||++|+|+|..|+++|.+||++++ +++++.+++++.+.+.+.|+++||++ +
T Consensus 166 i~~~~~v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~ 245 (482)
T 1ojt_A 166 IPEDPRIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNIMV 245 (482)
T ss_dssp CCCCTTEECHHHHTTCCCCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHGGGEEEEEC
T ss_pred CCccCcEEcHHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccccCHHHHHHHHHHHHhcCCEEEE
Confidence 665 56889999998888899999999999999999999999999999999 99999999999999999999999999 9
Q ss_pred ceEEEEEEEeCCCcEEEEEecCCC-CCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEe
Q psy14461 300 CCVIEKVISSFDGMKGVRGFHPES-KEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAV 378 (535)
Q Consensus 300 ~~~v~~i~~~~~~~~~v~~~~~~~-G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~ 378 (535)
++++++++.+ ++.+.|++.+..+ |+ ++++|.|++|+|++||+++++++.+|++++++|+|.||+++||+.|+|||+
T Consensus 246 ~~~v~~i~~~-~~~~~v~~~~~~~~g~--~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~ 322 (482)
T 1ojt_A 246 NTKTVAVEPK-EDGVYVTFEGANAPKE--PQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAI 322 (482)
T ss_dssp SCEEEEEEEE-TTEEEEEEESSSCCSS--CEEESCEEECCCEEECGGGTTGGGTTCCCCTTSCCCCCTTSBCSSTTEEEC
T ss_pred CCEEEEEEEc-CCeEEEEEeccCCCce--EEEcCEEEECcCCCcCCCCCChhhcCceeCCCCCEeeCCCcccCCCCEEEE
Confidence 9999999876 4556677752101 55 688999999999999999876688899999889999999999999999999
Q ss_pred CCcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCcccc
Q psy14461 379 GGIVHGKPNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNL 458 (535)
Q Consensus 379 GD~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~ 458 (535)
|||+ +.+++++.|.+||++||.||++.. ..+++..+|+++|++|++++||+||+||++.+. ++.+...++....++
T Consensus 323 GD~~-~~~~l~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~g~--~~~~~~~~~~~~~~~ 398 (482)
T 1ojt_A 323 GDIV-GQPMLAHKAVHEGHVAAENCAGHK-AYFDARVIPGVAYTSPEVAWVGETELSAKASAR--KITKANFPWAASGRA 398 (482)
T ss_dssp GGGT-CSSCCHHHHHHHHHHHHHHHTTCC-CCCCCCCCCEEECSSSCEEEEECCHHHHHHHTC--CEEEEEEEGGGCHHH
T ss_pred Eccc-CCCccHHHHHHHHHHHHHHHcCCC-ccCCCCCCCEEEEcCCCeEEEeCCHHHHHhcCC--CEEEEEEEcCcchHH
Confidence 9999 788999999999999999999854 456788899999999999999999999998844 687777777655544
Q ss_pred cCCCCCcchhhhhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCCCHHHHcCC
Q psy14461 459 LDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535 (535)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~~l~~~ 535 (535)
. .. +.+.+|+|+++|+++++|||+|++|++|.|+|+.+++||++++|++||.++
T Consensus 399 ~-~~----------------------~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~ 452 (482)
T 1ojt_A 399 I-AN----------------------GCDKPFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADIGKT 452 (482)
T ss_dssp H-HT----------------------TCCSCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTS
T ss_pred h-hc----------------------CCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcC
Confidence 3 11 146799999999999999999999999999999999999999999999864
No 13
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=1.1e-58 Score=495.43 Aligned_cols=417 Identities=17% Similarity=0.203 Sum_probs=347.5
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccc--cc-------cccccc----cccchh-hcccccc-ccccc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRK--KR-------RLYYPV----AMSDLE-LEQDSTS-ALNVT 153 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~--~~-------l~~~~~----~i~~~~-~~~~~~~-~~~~~ 153 (535)
++|+|||+|++|+.+|+.+...+.+|+|||+++..+... ++ .|.... ...... ..+..+. .....
T Consensus 4 ~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~~~ 83 (476)
T 3lad_A 4 FDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTGEV 83 (476)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECSCC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 578999999999999999888899999999986322110 00 110000 000000 0001110 01234
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhcCcEEEEeEEEEecCCEEEEce-----eEEEcceEEEeeCceecC-CCCC--
Q psy14461 154 IRNWNAATKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLSN-----RSVTGFNFLLAVERRCLP-EPRN-- 225 (535)
Q Consensus 154 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~~-----~~~~~d~lViATGs~p~~-~i~G-- 225 (535)
.++|..+..+.+.+.+.+...+...++..+|+++.+++.+.+++++.+.. .++.||+||||||++|.. +.++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~~~~~~~ 163 (476)
T 3lad_A 84 AIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVEIPPAPVD 163 (476)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEECSTTCEEEECTTSCEEEECCSCEEECCCEEECCCTTSCCC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEcCCCceEEEEcCEEEEcCCCCCCCCCCCCCC
Confidence 67899999999999999888888888899999999999998888777742 579999999999999987 5544
Q ss_pred -CceechhhHHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceE
Q psy14461 226 -SALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCV 302 (535)
Q Consensus 226 -~~v~~~~~~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~ 302 (535)
..++++++++.+...+++++|||+|++|+|+|..|++.|.+||++++ +++++.+++++.+.+.+.+++.||++ ++++
T Consensus 164 ~~~v~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~v~~~~~ 243 (476)
T 3lad_A 164 QDVIVDSTGALDFQNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKILLGAR 243 (476)
T ss_dssp SSSEEEHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCE
T ss_pred cccEEechhhhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcccCHHHHHHHHHHHHhCCCEEEECCE
Confidence 66889999998888899999999999999999999999999999999 99999999999999999999999999 9999
Q ss_pred EEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcC
Q psy14461 303 IEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIV 382 (535)
Q Consensus 303 v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~ 382 (535)
+++++.+ ++.+.+++.+ .+| +.++++|.|++|+|++||++.+.++..+++++++|+|.||++++|+.|+|||+|||+
T Consensus 244 v~~i~~~-~~~~~v~~~~-~~g-~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~ 320 (476)
T 3lad_A 244 VTGTEVK-NKQVTVKFVD-AEG-EKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYCATSVPGVYAIGDVV 320 (476)
T ss_dssp EEEEEEC-SSCEEEEEES-SSE-EEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCCTTSBCSSTTEEECGGGS
T ss_pred EEEEEEc-CCEEEEEEEe-CCC-cEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeCCCcccCCCCEEEEEccC
Confidence 9999876 4567777753 123 347999999999999999987767889999999999999999999999999999999
Q ss_pred CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCcccccCCC
Q psy14461 383 HGKPNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPL 462 (535)
Q Consensus 383 ~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (535)
+.+.+++.|.+||++||+||+|.. ...++..+|+++|++|++++||+||+||++.+. ++.+...++....++.
T Consensus 321 -~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~a~vGlte~~a~~~g~--~~~~~~~~~~~~~~~~--- 393 (476)
T 3lad_A 321 -RGAMLAHKASEEGVVVAERIAGHK-AQMNYDLIPAVIYTHPEIAGVGKTEQALKAEGV--AINVGVFPFAASGRAM--- 393 (476)
T ss_dssp -SSCCCHHHHHHHHHHHHHHHHHCC-CCCCTTCCCEEECSSSEEEEEECCHHHHHHTTC--CEEEEEEEGGGCHHHH---
T ss_pred -CCcccHHHHHHHHHHHHHHhcCCC-cccCCCCCCEEEECcCCEEEeeCCHHHHHhcCC--CEEEEEEeccccchhe---
Confidence 889999999999999999999865 456788899999999999999999999999843 6777777776555443
Q ss_pred CCcchhhhhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCCCHHHHcCC
Q psy14461 463 LPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535 (535)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~~l~~~ 535 (535)
..+++.||+||++|++|++|||+|++|++|.|+|+.+++||++++|++||.++
T Consensus 394 --------------------~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~ 446 (476)
T 3lad_A 394 --------------------AANDTAGFVKVIADAKTDRVLGVHVIGPSAAELVQQGAIAMEFGTSAEDLGMM 446 (476)
T ss_dssp --------------------HHTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTS
T ss_pred --------------------ecCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcC
Confidence 11256899999999999999999999999999999999999999999999874
No 14
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=2e-58 Score=491.37 Aligned_cols=415 Identities=24% Similarity=0.334 Sum_probs=348.7
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccc----ccc----ccccccchhhcccccc-cccccccCHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKR----RLY----YPVAMSDLELEQDSTS-ALNVTIRNWNA 159 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~----l~~----~~~~i~~~~~~~~~~~-~~~~~~~~~~~ 159 (535)
++|+|||+|++|+.+|.++...+.+|+|||++. +++. |. +|. +...+.......+.+. .......+|..
T Consensus 5 ~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~-~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 82 (463)
T 2r9z_A 5 FDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA-LGGT-CVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLDWPR 82 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHH-HHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CCHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC-CCCc-CcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcCHHH
Confidence 689999999999999999888899999999984 3221 11 111 0000000000111111 01124678999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcEEEEeEEEEecCCEEEEceeEEEcceEEEeeCceecC-CCCC-CceechhhHHhc
Q psy14461 160 ATKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLSNRSVTGFNFLLAVERRCLP-EPRN-SALISADDLFRL 237 (535)
Q Consensus 160 l~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~~~~~~~d~lViATGs~p~~-~i~G-~~v~~~~~~~~~ 237 (535)
+..+.+.....+...+...++..+|+++.+++.+++.++|.+++.++.||+||||||++|.. ++|| +.++++++++.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~~g~~~~~d~lviAtGs~p~~p~i~G~~~~~~~~~~~~~ 162 (463)
T 2r9z_A 83 LVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDAHTIEVEGQRLSADHIVIATGGRPIVPRLPGAELGITSDGFFAL 162 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTEEEEEEEEEECCCEEECCCSCTTGGGSBCHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccCCEEEECCEEEEcCEEEECCCCCCCCCCCCCccceecHHHHhhh
Confidence 99999988888888888888889999999998888889998866789999999999999998 8999 778899999998
Q ss_pred cCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEE
Q psy14461 238 GAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKG 315 (535)
Q Consensus 238 ~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~ 315 (535)
...+++++|||+|++|+|+|..|+++|.+|+++++ +.+++.+++++.+.+.+.+++.||++ +++++++++.+ ++.+.
T Consensus 163 ~~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~~~ 241 (463)
T 2r9z_A 163 QQQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQFDPLLSATLAENMHAQGIETHLEFAVAALERD-AQGTT 241 (463)
T ss_dssp SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEESSCCEEEEEEE-TTEEE
T ss_pred hccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEe-CCeEE
Confidence 88899999999999999999999999999999999 89999999999999999999999999 99999999876 34466
Q ss_pred EEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCCCCCcHHHHHHH
Q psy14461 316 VRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAIS 395 (535)
Q Consensus 316 v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~~~~~~~A~~~ 395 (535)
|++. +|++ ++++|.|++|+|++||++++.++.++++++++|+|.||++++|+.|+|||+|||+ +.+.+++.|.+|
T Consensus 242 v~~~---~G~~-~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~-~~~~~~~~A~~~ 316 (463)
T 2r9z_A 242 LVAQ---DGTR-LEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDAYQNTNVPGVYALGDIT-GRDQLTPVAIAA 316 (463)
T ss_dssp EEET---TCCE-EEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCCTTSBCSSTTEEECGGGG-TSCCCHHHHHHH
T ss_pred EEEe---CCcE-EEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECCCCccCCCCEEEEeecC-CCcccHHHHHHH
Confidence 7763 6753 6899999999999999987655778899998999999999999999999999999 788999999999
Q ss_pred HHHHHHHHhCCCCCC-CCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCcccccCCCCCcchhhhhhcc
Q psy14461 396 ARLIIERLYGMQDQL-MDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCLK 474 (535)
Q Consensus 396 g~~aa~~i~g~~~~~-~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (535)
|++||.||++..... .++..+|+++|++|++++||++|+||++++| .++.+...++....+.. ..
T Consensus 317 g~~aa~~i~g~~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~g-~~~~~~~~~~~~~~~~~-~~------------ 382 (463)
T 2r9z_A 317 GRRLAERLFDGQSERKLDYDNIPTVVFAHPPLSKVGLSEPEARERLG-DVLTVYETSFTPMRYAL-NE------------ 382 (463)
T ss_dssp HHHHHHHHHSCCTTCCCCCSSCCEEECCSSCEEEEECCHHHHHHHHC-SCEEEEEEEECCGGGTT-SS------------
T ss_pred HHHHHHHHcCCCCcccCCCCCCCEEEeCCCCeEEEcCCHHHHHhcCC-CCEEEEEEEcccchhhh-hc------------
Confidence 999999999865444 6788899999999999999999999998754 37888877777665543 11
Q ss_pred CCcccccccccCcceEEEEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCCCHHHHcCC
Q psy14461 475 GGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535 (535)
Q Consensus 475 ~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~~l~~~ 535 (535)
+.+.+|+|+++|+++++|||+|++|++|.|+|+.+++||++++|++||.++
T Consensus 383 ----------~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~ 433 (463)
T 2r9z_A 383 ----------HGPKTAMKLVCAGPEQRVVGVHVIGDGADEMLQGFAVAVKMGATKADFDNT 433 (463)
T ss_dssp ----------SCCCEEEEEEEETTTTEEEEEEEESTTGGGTSHHHHHHHHTTCBHHHHHTS
T ss_pred ----------CCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcC
Confidence 146899999999999999999999999999999999999999999999864
No 15
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=7.4e-59 Score=498.19 Aligned_cols=420 Identities=18% Similarity=0.164 Sum_probs=348.1
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccc-------cccccccccccchhhccccccc-ccccccCHHH
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRK-------KRRLYYPVAMSDLELEQDSTSA-LNVTIRNWNA 159 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~-------~~l~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~ 159 (535)
.++|+|||+|++|+.+|.++...+.+|+|||+++ +++.. ................++.+.. .....++|.+
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 86 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRISVNGKA 86 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEEEECHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCCccCHHH
Confidence 3789999999999999999988999999999975 33221 1111000000000111111111 1234578999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc-CcEEEEeEEEEecCCEEEEc-eeEEEcceEEEeeCceecC-CCCC---Cceechhh
Q psy14461 160 ATKLIKRFCIRAKNDSMRELKAL-GIDIVRTAAAFTNPHTIKLS-NRSVTGFNFLLAVERRCLP-EPRN---SALISADD 233 (535)
Q Consensus 160 l~~~~~~~~~~~~~~~~~~~~~~-gV~~~~g~~~~~~~~~v~~~-~~~~~~d~lViATGs~p~~-~i~G---~~v~~~~~ 233 (535)
+.++..+..+.+...+...+... +++++.|++.+.++++|.+. +.++.||+||||||++|.. ++++ +.++++++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~~~~v~~~~~~~~~~d~lViATGs~p~~p~~~~~~~~~v~t~~~ 166 (492)
T 3ic9_A 87 VMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLDEHTLQVDDHSQVIAKRIVIATGSRPNYPEFLAAAGSRLLTNDN 166 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEETTEEEETTTEEEEEEEEEECCCEECCCCHHHHTTGGGEECHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEecCCEEEEcCCcEEEeCEEEEccCCCCcCCCCCCccCCcEEcHHH
Confidence 99988887777766555555554 68899999999999999994 4789999999999999987 6554 57899999
Q ss_pred HHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCC
Q psy14461 234 LFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFD 311 (535)
Q Consensus 234 ~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~ 311 (535)
++.+...+++++|||||++|+|+|..|+++|.+||++++ +++++.+++++.+.+.+.|++. |++ +++.+++++.+ +
T Consensus 167 ~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~-~ 244 (492)
T 3ic9_A 167 LFELNDLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANLQDEEMKRYAEKTFNEE-FYFDAKARVISTIEK-E 244 (492)
T ss_dssp HTTCSSCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTCCCHHHHHHHHHHHHTT-SEEETTCEEEEEEEC-S
T ss_pred HhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccccCCHHHHHHHHHHHhhC-cEEEECCEEEEEEEc-C
Confidence 999988999999999999999999999999999999999 9999999999999999999988 999 99999999876 4
Q ss_pred CcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcC-CCCCcCCCCEEEeCCcCCCCCCcHH
Q psy14461 312 GMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCN-EKDQTSVGNIFAVGGIVHGKPNNAS 390 (535)
Q Consensus 312 ~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd-~~~~T~~~~IyA~GD~~~~~~~~~~ 390 (535)
+.+.+++.+ .+|++.++++|.|++|+|++||+++++++.+|++++++|+|.|| ++++|+.|+|||+|||+ +.+++++
T Consensus 245 ~~v~v~~~~-~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~t~~~~IyA~GD~~-~~~~~~~ 322 (492)
T 3ic9_A 245 DAVEVIYFD-KSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQTSVDHIFVAGDAN-NTLTLLH 322 (492)
T ss_dssp SSEEEEEEC-TTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCBCSSTTEEECGGGG-TSSCSHH
T ss_pred CEEEEEEEe-CCCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECcccccCCCCCEEEEEecC-CCCccHH
Confidence 567777652 36755589999999999999999997778999999999999999 99999999999999999 8889999
Q ss_pred HHHHHHHHHHHHHhC-CCCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCC---CCEEEEEEecCCcccccCCCCCcc
Q psy14461 391 MAAISARLIIERLYG-MQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGA---DGLVIYKSSYPTFDNLLDPLLPEN 466 (535)
Q Consensus 391 ~A~~~g~~aa~~i~g-~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 466 (535)
.|.+||++||.||++ ......++..+|+++|++|++++||+||+||++++|. .++.+...++....++. ..
T Consensus 323 ~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~g~~~g~~~~~~~~~~~~~~~a~-~~---- 397 (492)
T 3ic9_A 323 EAADDGKVAGTNAGAYPVIAQGQRRAPLSVVFTEPQVASVGLSLRQIEDLYADQDAANYVVGQVSFEGQGRSR-VM---- 397 (492)
T ss_dssp HHHHHHHHHHHHHHHTTSCCEECCCCCEEEECSSSEEEEEESCHHHHHHHCSCSSSCCEEEEEEEGGGCHHHH-HT----
T ss_pred HHHHHHHHHHHHHcCCCCCcccCCCCCcEEEECCCCeEEecCCHHHHHhccCccCCccEEEEEEEeccchhhh-hc----
Confidence 999999999999997 3444567888999999999999999999999998632 16888888887666554 11
Q ss_pred hhhhhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCCCHHHHcCC
Q psy14461 467 FVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535 (535)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~~l~~~ 535 (535)
+.+.||+||++|++|++|||+|++|++|.|+|+.+++||++++|++||.++
T Consensus 398 ------------------~~~~g~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~ 448 (492)
T 3ic9_A 398 ------------------GKNKGLLNVYADRTSGEFLGAEMFGPAAEHIGHLLAWARQQQMTVQAMLTM 448 (492)
T ss_dssp ------------------TCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHTTS
T ss_pred ------------------CCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhC
Confidence 257899999999999999999999999999999999999999999999874
No 16
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=8.2e-59 Score=497.21 Aligned_cols=414 Identities=23% Similarity=0.301 Sum_probs=350.5
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccccccc---cccc----ccccccchhhccccccc-ccccccCHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKK---RRLY----YPVAMSDLELEQDSTSA-LNVTIRNWNAA 160 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~---~l~~----~~~~i~~~~~~~~~~~~-~~~~~~~~~~l 160 (535)
++|+|||+|++|+.+|+.+...+.+|+|||++ .+++... .+|. ............+.+.. .....++|..+
T Consensus 27 ~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~-~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~ 105 (484)
T 3o0h_A 27 FDLFVIGSGSGGVRAARLAGALGKRVAIAEEY-RIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNWEKL 105 (484)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC-CCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCHHHH
Confidence 68999999999999999999899999999994 3332210 0110 00000000011111111 12346789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCcEEEEeEEEEecCCEEEE--ceeEEEcceEEEeeCceec-C-CCCC-CceechhhHH
Q psy14461 161 TKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKL--SNRSVTGFNFLLAVERRCL-P-EPRN-SALISADDLF 235 (535)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~--~~~~~~~d~lViATGs~p~-~-~i~G-~~v~~~~~~~ 235 (535)
..+.......+...+...++..+|+++.+.+.+.+.+++.+ ++.++.||+||||||++|. . ++|| +.++++++++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~v~~~~~~~~~d~lviAtG~~p~~~p~i~G~~~~~~~~~~~ 185 (484)
T 3o0h_A 106 VAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDEHTLELSVTGERISAEKILIATGAKIVSNSAIKGSDLCLTSNEIF 185 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTTCCEEEEEEEEECCCEEECCC--CBTGGGSBCTTTGG
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEecCCeEEEeCEEEEccCCCcccCCCCCCccccccHHHHH
Confidence 99999888888888888899999999999999999999999 4578999999999999999 7 8999 7788999999
Q ss_pred hccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCc
Q psy14461 236 RLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGM 313 (535)
Q Consensus 236 ~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~ 313 (535)
.+...+++++|||+|++|+|+|..|++.|.+|+++++ +.+++.+++++.+.+.+.+++.||++ .++.|++++.+ ++.
T Consensus 186 ~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~-~~~ 264 (484)
T 3o0h_A 186 DLEKLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISIIYEATVSQVQST-ENC 264 (484)
T ss_dssp GCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEESSCCEEEEEEC-SSS
T ss_pred hHHhcCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEee-CCE
Confidence 9888899999999999999999999999999999999 89999999999999999999999999 99999999876 456
Q ss_pred EEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCCCCCcHHHHH
Q psy14461 314 KGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAA 393 (535)
Q Consensus 314 ~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~~~~~~~A~ 393 (535)
+.|++. +|+ ++++|.|++|+|++|++.+++++..|++++++|+|.||++++|+.|+|||+|||+ +.+++++.|.
T Consensus 265 v~v~~~---~g~--~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~-~~~~~~~~A~ 338 (484)
T 3o0h_A 265 YNVVLT---NGQ--TICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTTNVSHIWAVGDVT-GHIQLTPVAI 338 (484)
T ss_dssp EEEEET---TSC--EEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECGGGG-TSCCCHHHHH
T ss_pred EEEEEC---CCc--EEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECCCCCCCCCCEEEEEecC-CCCcCHHHHH
Confidence 677773 676 7999999999999999998767888999999999999999999999999999999 8899999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCcccccCCCCCcchhhhhhc
Q psy14461 394 ISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCL 473 (535)
Q Consensus 394 ~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (535)
.||++||+||++......++..+|+++|++|++++||+||+||++++. ++.+...++....++. ..
T Consensus 339 ~~g~~aa~~i~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~g~--~~~~~~~~~~~~~~~~-~~----------- 404 (484)
T 3o0h_A 339 HDAMCFVKNAFENTSTTPDYDLITTAVFSQPEIGTVGLSEEDALHRYK--RVEIYRTVFRPMRNVL-SG----------- 404 (484)
T ss_dssp HHHHHHHHHHHC---CCCCCTTCCEEECCSSCEEEEECCHHHHHHHCS--EEEEEEEEECCHHHHH-HT-----------
T ss_pred HHHHHHHHHHcCCCCCcCCCCCCcEEEECCCCEEEeeCCHHHHHHcCC--CEEEEEecCCcchhhc-cC-----------
Confidence 999999999999766667888999999999999999999999999853 6888877777665543 11
Q ss_pred cCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCCCHHHHcCC
Q psy14461 474 KGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535 (535)
Q Consensus 474 ~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~~l~~~ 535 (535)
+++.||+||++|++|++|||+|++|++|.|+|+.+++||++++|++||.++
T Consensus 405 -----------~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~ 455 (484)
T 3o0h_A 405 -----------SPEKMFMKLVVDGESRIVVGAHVLGENAGEIAQLIGISLKGKLTKDIFDKT 455 (484)
T ss_dssp -----------CCCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHS
T ss_pred -----------CCCcEEEEEEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhcc
Confidence 257899999999999999999999999999999999999999999999754
No 17
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=2.7e-58 Score=491.34 Aligned_cols=418 Identities=16% Similarity=0.161 Sum_probs=345.8
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccccccc---ccccccc----cccchhhc-cc--ccccccccccCHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKK---RRLYYPV----AMSDLELE-QD--STSALNVTIRNWN 158 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~---~l~~~~~----~i~~~~~~-~~--~~~~~~~~~~~~~ 158 (535)
++|+|||+|++|+.+|+++...+.+|+|||+++.+++... .+|.... .+...... +. +........++|.
T Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 82 (468)
T 2qae_A 3 YDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDSA 82 (468)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCHH
Confidence 6899999999999999998888999999999976543211 0111000 00000000 00 1000013356899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcEEEEeEEEEecCCEEEEc---e--eEEEcceEEEeeCceecC-CCCC---Ccee
Q psy14461 159 AATKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLS---N--RSVTGFNFLLAVERRCLP-EPRN---SALI 229 (535)
Q Consensus 159 ~l~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~---~--~~~~~d~lViATGs~p~~-~i~G---~~v~ 229 (535)
.+..+.+...+.+...+...+++.+|+++.+++.+++.+++.+. + .++.||+||||||++|.. +++| ..++
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~p~~~g~~~~~v~ 162 (468)
T 2qae_A 83 KMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTELPFLPFDEKVVL 162 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCBTTBCCCSSSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEecCCceEEEEcCEEEECCCCCcCCCCCCCCCcCcee
Confidence 99999888888888878888888999999999888888877773 3 579999999999999998 8888 3689
Q ss_pred chhhHHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhh-hcCCeEE-cceEEEEE
Q psy14461 230 SADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSL-TKAGVSI-QCCVIEKV 306 (535)
Q Consensus 230 ~~~~~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l-~~~gV~i-~~~~v~~i 306 (535)
++++++.+...+++++|||+|++|+|+|..|++.|.+||++++ +++++.+++++.+.+.+.+ +++||++ ++++|+++
T Consensus 163 t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~~gv~i~~~~~v~~i 242 (468)
T 2qae_A 163 SSTGALALPRVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTKVVGG 242 (468)
T ss_dssp CHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCCEEECSCEEEEE
T ss_pred chHHHhhcccCCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccccCCHHHHHHHHHHHhhcCCcEEEeCCEEEEE
Confidence 9999999888899999999999999999999999999999999 9999999999999999999 9999999 99999999
Q ss_pred EEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCC-C
Q psy14461 307 ISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHG-K 385 (535)
Q Consensus 307 ~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~-~ 385 (535)
+.+ ++.+.+++.. .+|+..++++|.|++|+|++||+++++++.+|++++++|+|.||+++||+.|+|||+|||+ + .
T Consensus 243 ~~~-~~~~~v~~~~-~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~-~~~ 319 (468)
T 2qae_A 243 TNN-GDSVSLEVEG-KNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFETSIPDVYAIGDVV-DKG 319 (468)
T ss_dssp EEC-SSSEEEEEEC-C---EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECGGGB-SSS
T ss_pred EEc-CCeEEEEEEc-CCCceEEEECCEEEECCCcccCCCCCCchhcCCccCCCCCEeECCCcccCCCCEEEeeccC-CCC
Confidence 876 3456666642 2464447999999999999999998666788999988899999999999999999999999 7 7
Q ss_pred CCcHHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCcccccCCCCCc
Q psy14461 386 PNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPE 465 (535)
Q Consensus 386 ~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (535)
+++++.|.+||++||.||++.. .++++..+|+++|++|++++||+||+||++.+. ++.+...++....++. ..
T Consensus 320 ~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~--~~~~~~~~~~~~~~~~-~~--- 392 (468)
T 2qae_A 320 PMLAHKAEDEGVACAEILAGKP-GHVNYGVIPAVIYTMPEVASVGKSEDELKKEGV--AYKVGKFPFNANSRAK-AV--- 392 (468)
T ss_dssp CSCHHHHHHHHHHHHHHHTTCC-CCCCTTSCCEEECSSSEEEEEECCHHHHHHTTC--CEEEEEEEGGGCHHHH-HT---
T ss_pred CccHhHHHHHHHHHHHHHcCCC-ccCCCCCCCEEEECCCceEEEeCCHHHHHhcCC--CEEEEEEecccchhhh-hc---
Confidence 8999999999999999999854 456788899999999999999999999998743 6888777776555543 11
Q ss_pred chhhhhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCCCHHHHcCC
Q psy14461 466 NFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535 (535)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~~l~~~ 535 (535)
+++.+|+|+++|+++++|||+|++|++|.|+|+.+++||++++|++||.++
T Consensus 393 -------------------~~~~~~~kl~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~ 443 (468)
T 2qae_A 393 -------------------STEDGFVKVLVDKATDRILGVHIVCTTAGELIGEACLAMEYGASSEDVGRT 443 (468)
T ss_dssp -------------------TCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTS
T ss_pred -------------------CCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhc
Confidence 146899999999999999999999999999999999999999999999864
No 18
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-58 Score=494.95 Aligned_cols=417 Identities=20% Similarity=0.328 Sum_probs=344.9
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccc----cccc----cccccchhhcccccccc------c-c
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKR----RLYY----PVAMSDLELEQDSTSAL------N-V 152 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~----l~~~----~~~i~~~~~~~~~~~~~------~-~ 152 (535)
.++|+|||+|++|+.+|.++...+.+|+|||++. +++. |. +|.. ...+.........+... . .
T Consensus 11 ~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~-~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 88 (479)
T 2hqm_A 11 HYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA-LGGT-CVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEH 88 (479)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC-TTHH-HHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGG
T ss_pred cCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC-cCCc-CcccCcHHHHHHHHHHHHHHHHHhHHhcCccccccccccc
Confidence 4789999999999999999888899999999984 3221 10 1110 00000000000111100 1 2
Q ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHHhcCcEEEEeEEEEecCCEEEEc---ee--EEEcceEEEeeCceecC--CCCC
Q psy14461 153 TIRNWNAATKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLS---NR--SVTGFNFLLAVERRCLP--EPRN 225 (535)
Q Consensus 153 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~---~~--~~~~d~lViATGs~p~~--~i~G 225 (535)
..++|..+..+.+.++..+...+...++..+|+++.+++.+++++++.+. +. ++.||+||||||++|.. ++||
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~~i~g 168 (479)
T 2hqm_A 89 LTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEVYSANHILVATGGKAIFPENIPG 168 (479)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECTTSCEEEEESSSCCEEEEEEEEEECCCEEECCCTTSTT
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCCCCCCC
Confidence 46789999999998888888888888888999999999888887777762 33 79999999999999976 4788
Q ss_pred -CceechhhHHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceE
Q psy14461 226 -SALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCV 302 (535)
Q Consensus 226 -~~v~~~~~~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~ 302 (535)
+.++++++++.+...+++++|||||++|+|+|..|+++|.+||++++ +++++.+++++.+.+.+.|++.||++ ++++
T Consensus 169 ~~~~~~~~~~~~l~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~ 248 (479)
T 2hqm_A 169 FELGTDSDGFFRLEEQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRKFDECIQNTITDHYVKEGINVHKLSK 248 (479)
T ss_dssp GGGSBCHHHHHHCSSCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCC
T ss_pred cccccchHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccccCHHHHHHHHHHHHhCCeEEEeCCE
Confidence 66788999999888899999999999999999999999999999999 99999999999999999999999999 9999
Q ss_pred EEEEEEeCCC-cEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCc
Q psy14461 303 IEKVISSFDG-MKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGI 381 (535)
Q Consensus 303 v~~i~~~~~~-~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~ 381 (535)
|++++.++++ .+.|++. +|+ .++++|.|++|+|++||+ .|.++.+|++++++|+|.||++++|+.|+|||+|||
T Consensus 249 v~~i~~~~~~~~~~v~~~---~G~-~~i~~D~vv~a~G~~p~~-~l~l~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~ 323 (479)
T 2hqm_A 249 IVKVEKNVETDKLKIHMN---DSK-SIDDVDELIWTIGRKSHL-GMGSENVGIKLNSHDQIIADEYQNTNVPNIYSLGDV 323 (479)
T ss_dssp EEEEEECC-CCCEEEEET---TSC-EEEEESEEEECSCEEECC-CSSGGGGTCCBCTTSCBCCCTTCBCSSTTEEECGGG
T ss_pred EEEEEEcCCCcEEEEEEC---CCc-EEEEcCEEEECCCCCCcc-ccChhhcCceECCCCCEeECCCCccCCCCEEEEEec
Confidence 9999875223 2567763 673 379999999999999999 444578899999999999999999999999999999
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHhCCC---CCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCcccc
Q psy14461 382 VHGKPNNASMAAISARLIIERLYGMQ---DQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNL 458 (535)
Q Consensus 382 ~~~~~~~~~~A~~~g~~aa~~i~g~~---~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~ 458 (535)
+ +.+.+++.|.+||++||.||++.. ....++..+|+++|++|++++||++|+||++.++..++++...++....++
T Consensus 324 ~-~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~vGl~e~~a~~~~~~~~~~~~~~~~~~~~~~ 402 (479)
T 2hqm_A 324 V-GKVELTPVAIAAGRKLSNRLFGPEKFRNDKLDYENVPSVIFSHPEAGSIGISEKEAIEKYGKENIKVYNSKFTAMYYA 402 (479)
T ss_dssp T-TSSCCHHHHHHHHHHHHHHHHSCGGGTTCCCCCTTCCEEECCSSCEEEEECCHHHHHHHHCGGGEEEEEEEECCGGGG
T ss_pred C-CCcccHHHHHHHHHHHHHHhcCCCccCcccCCCCCCCeEEECCCCeEEEeCCHHHHHhcCCCCcEEEEEEeccHHHHH
Confidence 9 888899999999999999999865 345677789999999999999999999999885533488888777766654
Q ss_pred cCCCCCcchhhhhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCCCHHHHcCC
Q psy14461 459 LDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535 (535)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~~l~~~ 535 (535)
. .. +++.+|+||++|+++++|||+|++|++|.|+|+.+++||++++|++||.++
T Consensus 403 ~-~~----------------------~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~ 456 (479)
T 2hqm_A 403 M-LS----------------------EKSPTRYKIVCAGPNEKVVGLHIVGDSSAEILQGFGVAIKMGATKADFDNC 456 (479)
T ss_dssp G-CS----------------------SCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTS
T ss_pred h-hc----------------------CCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhC
Confidence 3 11 146899999999999999999999999999999999999999999999874
No 19
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=1.6e-58 Score=492.28 Aligned_cols=415 Identities=20% Similarity=0.200 Sum_probs=345.7
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccc---cccccccc----cccchhhcccccccccccccCHHHH
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRK---KRRLYYPV----AMSDLELEQDSTSALNVTIRNWNAA 160 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~---~~l~~~~~----~i~~~~~~~~~~~~~~~~~~~~~~l 160 (535)
.++++|||+|++|+.+|..+...+.+|+|||+++ +++.. +.+|...+ .+.........+.......++|..+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 84 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKL 84 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHHHH
Confidence 3789999999999999998888889999999987 32210 00111100 0000000000000002345789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCcEEEEeEEEEecCCEEEEceeEEEcceEEEeeCceecC-C-CCC-CceechhhHHhc
Q psy14461 161 TKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLSNRSVTGFNFLLAVERRCLP-E-PRN-SALISADDLFRL 237 (535)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~~~~~~~d~lViATGs~p~~-~-i~G-~~v~~~~~~~~~ 237 (535)
..+.++..+.+...+...++..||+++.+++.+.+++++.+.+.++.||+||||||++|.. + +|+ ..++++++++.+
T Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~g~~~~~d~lViATGs~p~~p~gi~~~~~v~~~~~~~~l 164 (464)
T 2eq6_A 85 GGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVGGERYGAKSLILATGSEPLELKGFPFGEDVWDSTRALKV 164 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTEEEEEEEEEECCCEEECCBTTBCCSSSEECHHHHTCG
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEccCCEEEEccEEEEeCEEEEcCCCCCCCCCCCCCCCcEEcHHHHHhh
Confidence 9998888888877777888889999999998888888888876689999999999999988 6 777 568899999988
Q ss_pred cC-CCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcE
Q psy14461 238 GA-WPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMK 314 (535)
Q Consensus 238 ~~-~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~ 314 (535)
.. .+++++|||||++|+|+|..|+++|.+||++++ +++++.+++++.+.+.+.+++.||++ +++++++++.+ ++.+
T Consensus 165 ~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~-~~~~ 243 (464)
T 2eq6_A 165 EEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKK-KDGL 243 (464)
T ss_dssp GGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEE-TTEE
T ss_pred hhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccccCHHHHHHHHHHHHhcCCEEEcCCEEEEEEEe-CCEE
Confidence 77 889999999999999999999999999999999 99999999999999999999999999 99999999876 4556
Q ss_pred EEEEecCCC--CCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCCCCCcHHHH
Q psy14461 315 GVRGFHPES--KEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMA 392 (535)
Q Consensus 315 ~v~~~~~~~--G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~~~~~~~A 392 (535)
.+++.+ + |+++++++|.|++|+|++||++++.++.+|++++++|+|.||+++||+.|+|||+|||+ +.+.+++.|
T Consensus 244 ~v~~~~--~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~-~~~~l~~~A 320 (464)
T 2eq6_A 244 HVRLEP--AEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGVYAIGDAA-RPPLLAHKA 320 (464)
T ss_dssp EEEEEE--TTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCCTTCBCSSTTEEECGGGT-CSSCCHHHH
T ss_pred EEEEee--cCCCceeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEECCCcccCCCCEEEEeccC-CCcccHHHH
Confidence 677642 4 66567999999999999999998766788899988999999999999999999999999 888999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCcccccCCCCCcchhhhhh
Q psy14461 393 AISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVC 472 (535)
Q Consensus 393 ~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (535)
.+||++||.||++.. ..+++. +|+++|++|++++||+||+||++.+. ++.+...++....++. ..
T Consensus 321 ~~~g~~aa~~i~g~~-~~~~~~-~p~~~~~~~~~a~vG~~e~~a~~~g~--~~~~~~~~~~~~~~~~-~~---------- 385 (464)
T 2eq6_A 321 MREGLIAAENAAGKD-SAFDYQ-VPSVVYTSPEWAGVGLTEEEAKRAGY--KVKVGKFPLAASGRAL-TL---------- 385 (464)
T ss_dssp HHHHHHHHHHHTTCC-CCCCCC-CCEEECSSSEEEEEECCHHHHHHTTC--CEEEEEEEGGGCHHHH-HT----------
T ss_pred HHHHHHHHHHhcCCC-cccCCC-CCeEEECCCCEEEEeCCHHHHHhcCC--CEEEEEEEcCcchhhh-hc----------
Confidence 999999999999854 456777 99999999999999999999998844 6777777776555543 11
Q ss_pred ccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCCCHHHHcC
Q psy14461 473 LKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDG 534 (535)
Q Consensus 473 ~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~~l~~ 534 (535)
+++.+|+|+++|+++++|||+|++|++|.|+|+.+++||++++|++||.+
T Consensus 386 ------------~~~~g~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~ 435 (464)
T 2eq6_A 386 ------------GGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLAL 435 (464)
T ss_dssp ------------SCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred ------------CCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhc
Confidence 14689999999999999999999999999999999999999999999975
No 20
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=3.1e-58 Score=491.62 Aligned_cols=420 Identities=18% Similarity=0.176 Sum_probs=345.2
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccccccc---cccccccc-ccc---hhh--ccc--ccccccccccC
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKK---RRLYYPVA-MSD---LEL--EQD--STSALNVTIRN 156 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~---~l~~~~~~-i~~---~~~--~~~--~~~~~~~~~~~ 156 (535)
.++++|||+|++|+.+|..+...+.+|+|||+++.+++... ..|..... ... ... .+. +.. ......+
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~-~~~~~~~ 84 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIE-MSEVRLN 84 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEE-ESCEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccc-cCCCccC
Confidence 47899999999999999988888999999999976543210 01110000 000 000 000 110 1123568
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcEEEEeEEEEecCCEEEEc----e-eEEEcceEEEeeCceecC-CCCC---Cc
Q psy14461 157 WNAATKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLS----N-RSVTGFNFLLAVERRCLP-EPRN---SA 227 (535)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~----~-~~~~~d~lViATGs~p~~-~i~G---~~ 227 (535)
|..+..+.+++.+.+...+...++..+|+++.+++.+.+.+++.+. + .++.||+||||||++|.. +++| ..
T Consensus 85 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~p~i~g~~~~~ 164 (474)
T 1zmd_A 85 LDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDT 164 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEETTEEEEECTTSCEEEEEEEEEEECCCEEECCCTTCCCCSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEecCCCcEEEEeCEEEECCCCCCCCCCCCCCCcCc
Confidence 9999999988888888777888888999999999888888877773 2 579999999999999998 8888 35
Q ss_pred eechhhHHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCc-cCcHHHHHHHHHhhhcCCeEE-cceEEE
Q psy14461 228 LISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLK-HFDQEMVRILLSSLTKAGVSI-QCCVIE 304 (535)
Q Consensus 228 v~~~~~~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~-~~~~~~~~~~~~~l~~~gV~i-~~~~v~ 304 (535)
++++++++.+...+++++|||||++|+|+|..|+++|.+||++++ +++++ .+++++.+.+.+.++++||++ ++++|+
T Consensus 165 v~t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~ 244 (474)
T 1zmd_A 165 IVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVT 244 (474)
T ss_dssp EECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTTCEEECSEEEE
T ss_pred EEcHHHHhhccccCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcccCHHHHHHHHHHHHHCCCEEEeCceEE
Confidence 899999998888899999999999999999999999999999999 99999 899999999999999999999 999999
Q ss_pred EEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCC
Q psy14461 305 KVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHG 384 (535)
Q Consensus 305 ~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~ 384 (535)
+++.++++.+.+++.+..+++..++++|.|++|+|++||++++.++.+|++++++|+|.||+++||+.|+|||+|||+ +
T Consensus 245 ~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD~~-~ 323 (474)
T 1zmd_A 245 GATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVV-A 323 (474)
T ss_dssp EEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCCTTCBCSSTTEEECGGGS-S
T ss_pred EEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEECcCCccCCCCEEEeeecC-C
Confidence 998763222666653211222238999999999999999998656788999998999999999999999999999999 7
Q ss_pred CCCcHHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCcccccCCCCC
Q psy14461 385 KPNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLP 464 (535)
Q Consensus 385 ~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (535)
.+++++.|.+||++||.||++.. .++++..+|+++|++|++++||+||+||++.+. ++.+...++....++. ..
T Consensus 324 ~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~--~~~~~~~~~~~~~~~~-~~-- 397 (474)
T 1zmd_A 324 GPMLAHKAEDEGIICVEGMAGGA-VHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGI--EYKVGKFPFAANSRAK-TN-- 397 (474)
T ss_dssp SCCCHHHHHHHHHHHHHHHTTCC-CCCCGGGCCEEECSSSEEEEEECCHHHHHHHTC--CEEEEEEEGGGCHHHH-HT--
T ss_pred CCccHHHHHHHHHHHHHHhcCCC-CcCCCCCCCEEEECCCCeEEEeCCHHHHHhcCC--CEEEEEEecccchhhh-hc--
Confidence 88999999999999999999864 456788899999999999999999999998843 7888777776655543 11
Q ss_pred cchhhhhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCCCHHHHcCC
Q psy14461 465 ENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535 (535)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~~l~~~ 535 (535)
+++.+|+|+++|+++++|||+|++|++|.|+|+.++++|++++|++||.++
T Consensus 398 --------------------~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~ 448 (474)
T 1zmd_A 398 --------------------ADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARV 448 (474)
T ss_dssp --------------------TCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHHS
T ss_pred --------------------CCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhC
Confidence 146899999999999999999999999999999999999999999999753
No 21
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=8.1e-59 Score=494.96 Aligned_cols=411 Identities=16% Similarity=0.147 Sum_probs=344.1
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccccccc---ccccc----cccccchhhcccccccccccccCHHHH
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKK---RRLYY----PVAMSDLELEQDSTSALNVTIRNWNAA 160 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~---~l~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~l 160 (535)
.++|+|||+|++|+.+|..+...+.+|+|||+.+.+++... .+|.. .........+.+. ....++|..+
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~----~~~~~~~~~~ 79 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIAN----VKIPLDFSTV 79 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHC----SCCCCCHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhccc----CCCCcCHHHH
Confidence 37899999999999999999888999999998876643311 01110 0000000000000 2346789999
Q ss_pred HHHHHHHHHHHH--HHHHHHHHhcCcEEEEeEEEEecCCEEEEce---eE--EEcceEEEeeCceecC-CCCC-Cceech
Q psy14461 161 TKLIKRFCIRAK--NDSMRELKALGIDIVRTAAAFTNPHTIKLSN---RS--VTGFNFLLAVERRCLP-EPRN-SALISA 231 (535)
Q Consensus 161 ~~~~~~~~~~~~--~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~~---~~--~~~d~lViATGs~p~~-~i~G-~~v~~~ 231 (535)
..+.+...+ +. ..+...++..+|+++.+++.+++++.+.+.. .+ +.||+||||||++|.. ++|| +.++++
T Consensus 80 ~~~~~~~~~-l~~~~~~~~~~~~~~v~~~~g~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~t~ 158 (466)
T 3l8k_A 80 QDRKDYVQE-LRFKQHKRNMSQYETLTFYKGYVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETAKLRLPGVEYCLTS 158 (466)
T ss_dssp HHHHHHHHH-HHHHHHHHHHTTCTTEEEESEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCCCCTTGGGSBCH
T ss_pred HHHHHhhee-ccccchHHHHHHhCCCEEEEeEEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCccCCCCCCccceEeH
Confidence 999888887 77 6777788888999999999988888777643 45 9999999999999999 9999 778999
Q ss_pred hhHH----hccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccC-cHHHHHHHHHhhhcCCeEE-cceEEE
Q psy14461 232 DDLF----RLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHF-DQEMVRILLSSLTKAGVSI-QCCVIE 304 (535)
Q Consensus 232 ~~~~----~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~-~~~~~~~~~~~l~~~gV~i-~~~~v~ 304 (535)
++++ .+...+++++|||+|++|+|+|..|+++|.+|+++++ +++++.+ ++++.+.+++.++ |++ ++++++
T Consensus 159 ~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~---v~i~~~~~v~ 235 (466)
T 3l8k_A 159 DDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITLEDQDIVNTLLSILK---LNIKFNSPVT 235 (466)
T ss_dssp HHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCCHHHHHHHHHHHC---CCEECSCCEE
T ss_pred HHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCCCCHHHHHHHHhcCE---EEEEECCEEE
Confidence 9999 6667789999999999999999999999999999999 9999988 9999999999886 999 999999
Q ss_pred EEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCC
Q psy14461 305 KVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHG 384 (535)
Q Consensus 305 ~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~ 384 (535)
+++.++++.+.+++.+ .+|++.++++|.|++|+|++||++ +.++.+|++++++| |.||+++||+.|+|||+|||+ +
T Consensus 236 ~i~~~~~~~v~v~~~~-~~G~~~~i~~D~vi~a~G~~p~~~-l~l~~~gl~~~~~G-i~vd~~~~t~~~~Iya~GD~~-~ 311 (466)
T 3l8k_A 236 EVKKIKDDEYEVIYST-KDGSKKSIFTNSVVLAAGRRPVIP-EGAREIGLSISKTG-IVVDETMKTNIPNVFATGDAN-G 311 (466)
T ss_dssp EEEEEETTEEEEEECC-TTSCCEEEEESCEEECCCEEECCC-TTTGGGTCCBCSSS-BCCCTTCBCSSTTEEECGGGT-C
T ss_pred EEEEcCCCcEEEEEEe-cCCceEEEEcCEEEECcCCCcccc-cchhhcCceeCCCC-EeECCCccCCCCCEEEEEecC-C
Confidence 9987622566677741 156666899999999999999999 55688899999999 999999999999999999999 7
Q ss_pred CCCcHHHHHHHHHHHHHHHhCC--CCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCcccccCCC
Q psy14461 385 KPNNASMAAISARLIIERLYGM--QDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPL 462 (535)
Q Consensus 385 ~~~~~~~A~~~g~~aa~~i~g~--~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (535)
.+++++.|.+||++||.||++. .....++..+|+++|++|++++||+||+||++.+. ++.+...++....++. .
T Consensus 312 ~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~g~--~~~~~~~~~~~~~~~~-~- 387 (466)
T 3l8k_A 312 LAPYYHAAVRMSIAAANNIMANGMPVDYVDVKSIPVTIYTIPSLSYVGILPSKARKMGI--EIVEAEYNMEEDVSAQ-I- 387 (466)
T ss_dssp SCCSHHHHHHHHHHHHHHHHTTTSCCCCCCSTTSCEEECSSSCEEEEECCHHHHHHHTC--CEEEEEEEGGGSHHHH-H-
T ss_pred CCccHhHHHHHHHHHHHHHhCCCCCccccCCCCCcEEEECCCCeEEecCCHHHHHhCCC--CEEEEEEEcccChhhe-e-
Confidence 8999999999999999999986 55567888999999999999999999999999854 7888887777655543 1
Q ss_pred CCcchhhhhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCCCHHHHcCC
Q psy14461 463 LPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535 (535)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~~l~~~ 535 (535)
.+++.||+||++|++|++|||+|++|++|.|+|+.+++||++++|++||.++
T Consensus 388 ---------------------~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~ 439 (466)
T 3l8k_A 388 ---------------------YGQKEGVLKLIFERGSMRLIGAWMIGVHSQYLINELGLAVAYGLNAKQLASF 439 (466)
T ss_dssp ---------------------HTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHC
T ss_pred ---------------------cCCCeEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCcCCHHHHhcc
Confidence 1257899999999999999999999999999999999999999999999764
No 22
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.6e-58 Score=496.68 Aligned_cols=420 Identities=22% Similarity=0.346 Sum_probs=334.6
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccc----cccc----cccccchhhcccccccccccccCHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKR----RLYY----PVAMSDLELEQDSTSALNVTIRNWNAA 160 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~----l~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~l 160 (535)
++|+|||+|++|+.+|.++...+.+|+|||++. +++. |. +|.. ...+.....+...+.......++|..+
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~-c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 80 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAARHNAKVALVEKSR-LGGT-CVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLPLL 80 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTHH-HHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHHHH
T ss_pred cCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC-cCcc-ccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHHHH
Confidence 478999999999999999888899999999985 3211 11 1110 000011111111111111145789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCcEEEEeEEEEecCCEEEEc--------------eeEEEcceEEEeeCceecC-CCCC
Q psy14461 161 TKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLS--------------NRSVTGFNFLLAVERRCLP-EPRN 225 (535)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~--------------~~~~~~d~lViATGs~p~~-~i~G 225 (535)
..+.+..+..+...+...++..||+++.+++.+++++++.+. +.++.||+||||||++|.. ++||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~~p~i~G 160 (500)
T 1onf_A 81 VERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVFPPVKG 160 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC--------------------------CBSSEEECCCCCBCCCSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeccccccccccCCCceEEEeCEEEECCCCCCCCCCCCC
Confidence 998888888888878888888999999998777777777763 3568999999999999998 8999
Q ss_pred -CceechhhHHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceE
Q psy14461 226 -SALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCV 302 (535)
Q Consensus 226 -~~v~~~~~~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~ 302 (535)
+.++++++++.+.. +++++|||||++|+|+|..|+++|.+||++++ +++++.+++++.+.+.+.|+++||++ ++++
T Consensus 161 ~~~~~~~~~~~~~~~-~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gv~i~~~~~ 239 (500)
T 1onf_A 161 IENTISSDEFFNIKE-SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRKFDESVINVLENDMKKNNINIVTFAD 239 (500)
T ss_dssp GGGCEEHHHHTTCCC-CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCC
T ss_pred CCcccCHHHHhccCC-CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcccchhhHHHHHHHHHhCCCEEEECCE
Confidence 77889999988877 99999999999999999999999999999999 99999999999999999999999999 9999
Q ss_pred EEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcC
Q psy14461 303 IEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIV 382 (535)
Q Consensus 303 v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~ 382 (535)
+++++.++++.+.|++. +|++ ++++|.|++|+|++||++.|.++.+|+++ ++|+|.||+++||+.|+|||+|||+
T Consensus 240 v~~i~~~~~~~~~v~~~---~g~~-~~~~D~vi~a~G~~p~~~~l~~~~~g~~~-~~G~i~vd~~~~t~~~~iya~GD~~ 314 (500)
T 1onf_A 240 VVEIKKVSDKNLSIHLS---DGRI-YEHFDHVIYCVGRSPDTENLKLEKLNVET-NNNYIVVDENQRTSVNNIYAVGDCC 314 (500)
T ss_dssp EEEEEESSTTCEEEEET---TSCE-EEEESEEEECCCBCCTTTTSSCTTTTCCB-SSSCEEECTTCBCSSSSEEECSTTE
T ss_pred EEEEEEcCCceEEEEEC---CCcE-EEECCEEEECCCCCcCCCCCCchhcCccc-cCCEEEECCCcccCCCCEEEEeccc
Confidence 99998753344667763 6762 39999999999999999766558889998 7899999999999999999999998
Q ss_pred C---------------------------------CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEEcCCceeee
Q psy14461 383 H---------------------------------GKPNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTV 429 (535)
Q Consensus 383 ~---------------------------------~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~v 429 (535)
. +.+++++.|.+||++||+||++......++..+|+++|++|++++|
T Consensus 315 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~v 394 (500)
T 1onf_A 315 MVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFLKKTRKTNYKLIPTVIFSHPPIGTI 394 (500)
T ss_dssp EEC------------------------------CBCCCCHHHHHHHHHHHHHHHHSCTTCCCCCSSCCEEECCSSCEEEE
T ss_pred cccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhCCCCccCCCCCCCeEEEcCcceEEE
Confidence 1 3567899999999999999998665567788899999999999999
Q ss_pred cCCHHHHHHhcCCCCEEEEEEecCCcccccCCCCCcchhhhhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEc
Q psy14461 430 GMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIG 509 (535)
Q Consensus 430 G~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G 509 (535)
|+||+||++.+|..++.+....+....++.+ .-. ..+.+.+|+||++|+++++|||+|++|
T Consensus 395 Gl~e~~a~~~~g~~~~~~~~~~~~~~~~~~~-~~~------------------~~~~~~~~~kli~~~~~~~ilG~~~~g 455 (500)
T 1onf_A 395 GLSEEAAIQIYGKENVKIYESKFTNLFFSVY-DIE------------------PELKEKTYLKLVCVGKDELIKGLHIIG 455 (500)
T ss_dssp ECCHHHHHHHTCGGGEEEEEEEECCGGGTTS-CSC------------------GGGSCCEEEEEEEETTTTEEEEEEEES
T ss_pred eCCHHHHHhcCCCccEEEEEEECchhhhhhc-ccc------------------ccCCCceEEEEEEECCCCEEEEEEEEC
Confidence 9999999988542368877777765544320 000 012468999999999999999999999
Q ss_pred CchhHHHHHHHHHHHCCCCHHHHcCC
Q psy14461 510 QNVAGMIFGYSLALRKFLTKAELDGT 535 (535)
Q Consensus 510 ~~a~e~i~~~~~~i~~~~t~~~l~~~ 535 (535)
++|.|+|+.+++||++++|++||.++
T Consensus 456 ~~a~~~i~~~~~ai~~~~t~~~l~~~ 481 (500)
T 1onf_A 456 LNADEIVQGFAVALKMNATKKDFDET 481 (500)
T ss_dssp TTHHHHHHHHHHHHHTTCBHHHHHTS
T ss_pred CCHHHHHHHHHHHHHcCCCHHHHhcc
Confidence 99999999999999999999999864
No 23
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=1e-57 Score=486.35 Aligned_cols=417 Identities=18% Similarity=0.170 Sum_probs=342.2
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccc---cccccccc----cccchhh-cccccccccccccCHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRK---KRRLYYPV----AMSDLEL-EQDSTSALNVTIRNWNAA 160 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~---~~l~~~~~----~i~~~~~-~~~~~~~~~~~~~~~~~l 160 (535)
++|+|||+|++|+.+|+.+...+.+|+|||++. ++... ..+|.... .+..... ....+.......++|..+
T Consensus 4 ~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~-~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 82 (464)
T 2a8x_A 4 YDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY-WGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYGIA 82 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCHHHH
Confidence 689999999999999999888899999999983 32110 00111000 0000000 000000001235688888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCcEEEEeEEEEecCCEEEEc---e--eEEEcceEEEeeCceecC-CCCC--Cceechh
Q psy14461 161 TKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLS---N--RSVTGFNFLLAVERRCLP-EPRN--SALISAD 232 (535)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~---~--~~~~~d~lViATGs~p~~-~i~G--~~v~~~~ 232 (535)
..+.......+...+...+++.||+++.+++.+.+.+.+.+. + .++.||+||+|||++|+. +++| ..+++++
T Consensus 83 ~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~~~~g~~~~~~~~~ 162 (464)
T 2a8x_A 83 YDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRLVPGTSLSANVVTYE 162 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEESSSSEEEEEETTSCCEEEEEEEEEECCCEEECCCTTCCCBTTEECHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCCCCceEEecH
Confidence 888877777777777788888999999999888777777763 3 579999999999999988 8888 3488999
Q ss_pred hHHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeC
Q psy14461 233 DLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVISSF 310 (535)
Q Consensus 233 ~~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~ 310 (535)
+++.+...+++++|||||++|+|+|..|+++|.+||++++ +++++.+++++.+.+.+.++++||++ +++++++++.+
T Consensus 163 ~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~- 241 (464)
T 2a8x_A 163 EQILSRELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTATKVESIADG- 241 (464)
T ss_dssp HHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEECSCEEEEEEEC-
T ss_pred HHhhccccCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHcCCEEEeCcEEEEEEEc-
Confidence 9998888899999999999999999999999999999999 99999999999999999999999999 99999999875
Q ss_pred CCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCCCCCcHH
Q psy14461 311 DGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNAS 390 (535)
Q Consensus 311 ~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~~~~~~ 390 (535)
++.+.+++.. +|+..++++|.|++|+|++||+++++++.+|++++++|+|.||+++||+.|+|||+|||+ +.+++++
T Consensus 242 ~~~~~v~~~~--~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~-~~~~~~~ 318 (464)
T 2a8x_A 242 GSQVTVTVTK--DGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYMRTNVGHIYAIGDVN-GLLQLAH 318 (464)
T ss_dssp SSCEEEEEES--SSCEEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCCCTTSBCSSTTEEECGGGG-CSSCSHH
T ss_pred CCeEEEEEEc--CCceEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeECcCCccCCCCEEEeECcC-CCccCHH
Confidence 3456666642 564458999999999999999998766788999988899999999999999999999999 7888999
Q ss_pred HHHHHHHHHHHHHhCCCCCC-CCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCcccccCCCCCcchhh
Q psy14461 391 MAAISARLIIERLYGMQDQL-MDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVK 469 (535)
Q Consensus 391 ~A~~~g~~aa~~i~g~~~~~-~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (535)
.|.+||++||.||++....+ ++|..+|+++|++|++++||+||+||++.+. ++.+...++....++. .
T Consensus 319 ~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~--~~~~~~~~~~~~~~~~-~-------- 387 (464)
T 2a8x_A 319 VAEAQGVVAAETIAGAETLTLGDHRMLPRATFCQPNVASFGLTEQQARNEGY--DVVVAKFPFTANAKAH-G-------- 387 (464)
T ss_dssp HHHHHHHHHHHHHHTCCCCCCCCGGGSCEEECSSSEEEEEECCHHHHHHTTC--CEEEEEEEGGGCHHHH-H--------
T ss_pred HHHHHHHHHHHHhcCCCCcccCCCCCCCEEEECCCCeEEEcCCHHHHHhcCC--CEEEEEEEcchhhhhh-h--------
Confidence 99999999999999833344 6788899999999999999999999998743 6887777776555432 1
Q ss_pred hhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCCCHHHHcCC
Q psy14461 470 LVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535 (535)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~~l~~~ 535 (535)
.+++.+|+|+++|+++++|||+|++|++|.|+|+.++++|++++|++||.++
T Consensus 388 --------------~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~ 439 (464)
T 2a8x_A 388 --------------VGDPSGFVKLVADAKHGELLGGHLVGHDVAELLPELTLAQRWDLTASELARN 439 (464)
T ss_dssp --------------HTCCCCEEEEEEETTTTEEEEEEEEETTGGGGHHHHHHHHHTTCBHHHHTTS
T ss_pred --------------cCCCcEEEEEEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhhC
Confidence 1246899999999999999999999999999999999999999999999864
No 24
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.9e-57 Score=481.59 Aligned_cols=416 Identities=20% Similarity=0.264 Sum_probs=342.2
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccc---cccccccc----cccchhhcccccc-cccccccCHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRK---KRRLYYPV----AMSDLELEQDSTS-ALNVTIRNWNAA 160 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~---~~l~~~~~----~i~~~~~~~~~~~-~~~~~~~~~~~l 160 (535)
++|+|||+|++|+.+|.++...+.+|+|||++ .+++.. ..+|.... ...........+. .......+|..+
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 82 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFAKV 82 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHHHH
Confidence 57899999999999999888889999999998 332210 00111000 0000000000000 011235688888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCcEEEEeEEEEecCCEEEEc---e-eEEEcceEEEeeCceecC-CCCC--Cceechhh
Q psy14461 161 TKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLS---N-RSVTGFNFLLAVERRCLP-EPRN--SALISADD 233 (535)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~---~-~~~~~d~lViATGs~p~~-~i~G--~~v~~~~~ 233 (535)
..+.+...+.+...+...+++.||+++.+++.+.+++++.+. + .++.||+||||||++|.. +++| ..++++++
T Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~i~~d~lViATGs~p~~~~~~g~~~~v~~~~~ 162 (455)
T 1ebd_A 83 QEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDSAQTYTFKNAIIATGSRPIELPNFKFSNRILDSTG 162 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEETTEEEEEETTEEEEEECSEEEECCCEEECCBTTBCCCSSEECHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCcEEEEeCEEEEecCCCCCCCCCCCccceEecHHH
Confidence 888888888887777888888999999999888888877763 3 579999999999999998 8888 34889999
Q ss_pred HHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCC
Q psy14461 234 LFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFD 311 (535)
Q Consensus 234 ~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~ 311 (535)
++.+...+++++|||||++|+|+|..|+++|.+||++++ +++++.+++++.+.+.+.+++.||++ ++++|++++.+ +
T Consensus 163 ~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~ 241 (455)
T 1ebd_A 163 ALNLGEVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNALAKGAEER-E 241 (455)
T ss_dssp HHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEE-T
T ss_pred HhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEe-C
Confidence 998888899999999999999999999999999999999 99999999999999999999999999 99999999876 4
Q ss_pred CcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCCCCCcHHH
Q psy14461 312 GMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASM 391 (535)
Q Consensus 312 ~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~~~~~~~ 391 (535)
+.+.+++.. +|+..++++|.|++|+|++||+++++++.++++++++|+|.||+++||+.|+|||+|||+ +.+++++.
T Consensus 242 ~~~~v~~~~--~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~-~~~~~~~~ 318 (455)
T 1ebd_A 242 DGVTVTYEA--NGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRTSVPNIFAIGDIV-PGPALAHK 318 (455)
T ss_dssp TEEEEEEEE--TTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCCTTCBCSSTTEEECGGGS-SSCCCHHH
T ss_pred CeEEEEEEe--CCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeCCCcccCCCCEEEEeccC-CCcccHHH
Confidence 556666642 333347999999999999999998666888999998999999999999999999999999 78889999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCcccccCCCCCcchhhhh
Q psy14461 392 AAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLV 471 (535)
Q Consensus 392 A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (535)
|.+||++||.||++.. .++++..+|+++|++|++++||+||+||++.+. ++.+...++....++. .
T Consensus 319 A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~--~~~~~~~~~~~~~~~~-~---------- 384 (455)
T 1ebd_A 319 ASYEGKVAAEAIAGHP-SAVDYVAIPAVVFSDPECASVGYFEQQAKDEGI--DVIAAKFPFAANGRAL-A---------- 384 (455)
T ss_dssp HHHHHHHHHHHHTSCC-CCCCCSCCCEEECSSSCEEEEECCHHHHHTTTC--CEEEEEEEGGGCHHHH-H----------
T ss_pred HHHHHHHHHHHHcCCC-ccCCCCCCCEEEECCCceEEEeCCHHHHHhcCC--CEEEEEEEcCcchHHh-h----------
Confidence 9999999999999854 456788899999999999999999999998743 6887777776554432 1
Q ss_pred hccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCCCHHHHcCC
Q psy14461 472 CLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535 (535)
Q Consensus 472 ~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~~l~~~ 535 (535)
.+++.+|+|+++|+++++|||+|++|++|.|+|+.+++||++++|++||.++
T Consensus 385 ------------~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~ 436 (455)
T 1ebd_A 385 ------------LNDTDGFLKLVVRKEDGVIIGAQIIGPNASDMIAELGLAIEAGMTAEDIALT 436 (455)
T ss_dssp ------------HTCCCCEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHHTCBHHHHHHS
T ss_pred ------------cCCCcEEEEEEEECCCCEEEEEEEeCCCHHHHHHHHHHHHHCCCCHHHHhhc
Confidence 1246899999999999999999999999999999999999999999999753
No 25
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=7.8e-58 Score=488.05 Aligned_cols=418 Identities=18% Similarity=0.187 Sum_probs=344.9
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccccccc---cccccccc-ccc---hhhc-cc--ccccccccccCHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKK---RRLYYPVA-MSD---LELE-QD--STSALNVTIRNWN 158 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~---~l~~~~~~-i~~---~~~~-~~--~~~~~~~~~~~~~ 158 (535)
++|+|||+|++|+.+|..+...+.+|+|||+++.+++... .+|..... ... .... +. +.. ......+|.
T Consensus 7 ~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~ 85 (470)
T 1dxl_A 7 NDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVK-VSNVEIDLA 85 (470)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEE-ESCEEECHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcc-cCCCccCHH
Confidence 5789999999999999988888899999999976543211 01110000 000 0000 00 000 112346888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcEEEEeEEEEecCCEEEEc---e--eEEEcceEEEeeCceecC-CCCC---Ccee
Q psy14461 159 AATKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLS---N--RSVTGFNFLLAVERRCLP-EPRN---SALI 229 (535)
Q Consensus 159 ~l~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~---~--~~~~~d~lViATGs~p~~-~i~G---~~v~ 229 (535)
.+..+.+...+.+...+...++..+|+++.+++.+.+.+.+.+. + .++.||+||+|||++|.. +++| ..++
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p~~~g~~~~~v~ 165 (470)
T 1dxl_A 86 AMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVKSLPGVTIDEKKIV 165 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEETTEEEECCSSSCCEEEECSEEEECCCEEECCBTTBCCCSSSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCCCCcccEE
Confidence 88888888888887777778888899999999888888887774 2 579999999999999998 8888 3689
Q ss_pred chhhHHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEE
Q psy14461 230 SADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVI 307 (535)
Q Consensus 230 ~~~~~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~ 307 (535)
++++++.+...+++++|||||++|+|+|..|+++|.+||++++ +++++.+++++.+.+.+.+++.||++ +++++++++
T Consensus 166 ~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~ 245 (470)
T 1dxl_A 166 SSTGALALSEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTKVVGVD 245 (470)
T ss_dssp CHHHHTTCSSCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHSSCCEECSEEEEEEE
T ss_pred eHHHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccccccHHHHHHHHHHHHHcCCEEEeCCEEEEEE
Confidence 9999998888899999999999999999999999999999999 99999999999999999999999999 999999998
Q ss_pred EeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCCCCC
Q psy14461 308 SSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPN 387 (535)
Q Consensus 308 ~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~~~ 387 (535)
.+ ++.+.+++.+..+|+..++++|.|++|+|++||+++++++.+|++++++|+|.||+++||+.|+|||+|||+ +.++
T Consensus 246 ~~-~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~Iya~GD~~-~~~~ 323 (470)
T 1dxl_A 246 TS-GDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFSTNVSGVYAIGDVI-PGPM 323 (470)
T ss_dssp CS-SSSEEEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCCTTCBCSSTTEEECSTTS-SSCC
T ss_pred Ec-CCeEEEEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECcCCccCCCCEEEEeccC-CCCc
Confidence 75 344666664322454448999999999999999998666888999998899999999999999999999999 7888
Q ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCcccccCCCCCcch
Q psy14461 388 NASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENF 467 (535)
Q Consensus 388 ~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (535)
+++.|.+||++||.||++.. .++++..+|+++|++|++++||+||+||++.+. ++.+...++....++. .
T Consensus 324 ~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~--~~~~~~~~~~~~~~~~-~------ 393 (470)
T 1dxl_A 324 LAHKAEEDGVACVEYLAGKV-GHVDYDKVPGVVYTNPEVASVGKTEEQVKETGV--EYRVGKFPFMANSRAK-A------ 393 (470)
T ss_dssp CHHHHHHHHHHHHHHHTTSC-CCCCTTSCCEEECSSSEEEEEECCHHHHHHTTC--CEEEEEEEGGGCHHHH-H------
T ss_pred cHHHHHHHHHHHHHHHcCCC-cCCCCCCCCEEEECCCceEEEcCCHHHHHhcCC--cEEEEEEecccchHHH-h------
Confidence 99999999999999999854 456788899999999999999999999998743 6887777776554432 1
Q ss_pred hhhhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCCCHHHHcCC
Q psy14461 468 VKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535 (535)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~~l~~~ 535 (535)
.+++.+|+|+++|+++++|||+|++|++|.|+|+.++++|++++|++||.++
T Consensus 394 ----------------~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~ 445 (470)
T 1dxl_A 394 ----------------IDNAEGLVKIIAEKETDKILGVHIMAPNAGELIHEAAIALQYDASSEDIARV 445 (470)
T ss_dssp ----------------HSCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTS
T ss_pred ----------------cCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhc
Confidence 1246899999999999999999999999999999999999999999999764
No 26
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.3e-57 Score=487.77 Aligned_cols=414 Identities=17% Similarity=0.179 Sum_probs=342.7
Q ss_pred EEEEeeCCccHHHHHHHHHhhC---CCeEEEEecCCccccccc---ccccccc----cccchhhccccccc---cccccc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTN---QRRDELQERGSHLSFRKK---RRLYYPV----AMSDLELEQDSTSA---LNVTIR 155 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~---~~~V~lie~~~~~~~~~~---~l~~~~~----~i~~~~~~~~~~~~---~~~~~~ 155 (535)
++|+|||+|++|+.+|..+... +.+|+|||+++ +++... .+|.... ........+..+.. ......
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 81 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAKI 81 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------CB
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCcc
Confidence 5899999999999999887776 89999999987 432210 0111000 00000000000000 113356
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhcCcEEEEeEEEEecC------CEEEEc---ee--EEEcceEEEeeCceecC-CC
Q psy14461 156 NWNAATKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFTNP------HTIKLS---NR--SVTGFNFLLAVERRCLP-EP 223 (535)
Q Consensus 156 ~~~~l~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~------~~v~~~---~~--~~~~d~lViATGs~p~~-~i 223 (535)
+|..+..++++..+.+...+...+++.||+++.+++.+++. +++.+. +. .+.||+||||||++|.. ++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p~~p~i 161 (499)
T 1xdi_A 82 SLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPRILPS 161 (499)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEECCCGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCCCC
Confidence 89999999888888888878888889999999999888776 666662 23 79999999999999988 88
Q ss_pred CC---CceechhhHHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-
Q psy14461 224 RN---SALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI- 298 (535)
Q Consensus 224 ~G---~~v~~~~~~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i- 298 (535)
|| ..+++.++++.+...+++++|||+|++|+|+|..|++.|.+|+++++ +.+++.+++++.+.+.+.+++.||++
T Consensus 162 ~g~~~~~v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~ 241 (499)
T 1xdi_A 162 AQPDGERILTWRQLYDLDALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPYEDADAALVLEESFAERGVRLF 241 (499)
T ss_dssp GCCCSSSEEEGGGGGGCSSCCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCCSSHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCcCcEEehhHhhhhhccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEE
Confidence 88 45889999998888899999999999999999999999999999999 99999999999999999999999999
Q ss_pred cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEe
Q psy14461 299 QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAV 378 (535)
Q Consensus 299 ~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~ 378 (535)
+++.|++++.+ ++.+.+++ .+|+ ++++|.|++|+|++||+++++++.+|++++++|+|.||+++||+.|+|||+
T Consensus 242 ~~~~V~~i~~~-~~~v~v~~---~~g~--~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~ 315 (499)
T 1xdi_A 242 KNARAASVTRT-GAGVLVTM---TDGR--TVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDRVSRTLATGIYAA 315 (499)
T ss_dssp TTCCEEEEEEC-SSSEEEEE---TTSC--EEEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCCSSSBCSSTTEEEC
T ss_pred eCCEEEEEEEe-CCEEEEEE---CCCc--EEEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEECCCcccCCCCEEEE
Confidence 99999999875 34566665 3676 799999999999999999866688899999889999999999999999999
Q ss_pred CCcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCcccc
Q psy14461 379 GGIVHGKPNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNL 458 (535)
Q Consensus 379 GD~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~ 458 (535)
|||+ +.+++++.|.+||++||.||+|.....+++..+|+++|++|++++||+||+||++.+. ++.+...++....++
T Consensus 316 GD~~-~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~--~~~~~~~~~~~~~~~ 392 (499)
T 1xdi_A 316 GDCT-GLLPLASVAAMQGRIAMYHALGEGVSPIRLRTVAATVFTRPEIAAVGVPQSVIDAGSV--AARTIMLPLRTNARA 392 (499)
T ss_dssp SGGG-TSCSCHHHHHHHHHHHHHHHTTCCCCCCCGGGCEEEECSSSEEEEEESCHHHHHHTSS--CEEEEEEESTTSHHH
T ss_pred eccC-CCcccHHHHHHHHHHHHHHhcCCCCccCCCCCCcEEEEecCCceEeCCCHHHHHhCCC--CEEEEEEecCcccce
Confidence 9999 8888999999999999999998644456788899999999999999999999998854 788877777665554
Q ss_pred cCCCCCcchhhhhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCCCHHHHcCC
Q psy14461 459 LDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535 (535)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~~l~~~ 535 (535)
. .. +++.+|+|+++|+++++|||+|++|++|.|+|+.+++||++++|++||.++
T Consensus 393 ~-~~----------------------~~~~g~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~ 446 (499)
T 1xdi_A 393 K-MS----------------------EMRHGFVKIFCRRSTGVVIGGVVVAPIASELILPIAVAVQNRITVNELAQT 446 (499)
T ss_dssp H-HT----------------------TCSSCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTS
T ss_pred e-ec----------------------CCCceEEEEEEECCCCEEEEEEEECCchHHHHHHHHHHHHCCCCHHHHhcc
Confidence 3 11 246899999999999999999999999999999999999999999999764
No 27
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=2.3e-58 Score=487.00 Aligned_cols=380 Identities=16% Similarity=0.167 Sum_probs=305.0
Q ss_pred EEEeeCCccHHHHHHHHHhh--CCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHH
Q psy14461 90 YLDRIGDEGILLEEELKRQT--NQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRF 167 (535)
Q Consensus 90 ~v~iiG~G~aG~~~al~~~~--~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (535)
+|+|||+|++|+.+|.++.. ...+|+|||++++.+|.++.+|++ +++... +.....
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~---~~~~~~-------------~~~~~~------ 59 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYV---IGEVVE-------------DRRYAL------ 59 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHH---HTTSSC-------------CGGGTB------
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHH---HcCCcc-------------chhhhh------
Confidence 47999999999999976544 447899999999999988888766 332210 000000
Q ss_pred HHHHHHHHHHHHHhcCcEEEEeE-EEEec--CCEEEEce------eEEEcceEEEeeCceecC-CCCCCce---echhhH
Q psy14461 168 CIRAKNDSMRELKALGIDIVRTA-AAFTN--PHTIKLSN------RSVTGFNFLLAVERRCLP-EPRNSAL---ISADDL 234 (535)
Q Consensus 168 ~~~~~~~~~~~~~~~gV~~~~g~-~~~~~--~~~v~~~~------~~~~~d~lViATGs~p~~-~i~G~~v---~~~~~~ 234 (535)
....+.++++.+|+++.+. +..++ .+.+.+.. .++.||+||||||++|+. ++||+.+ .+.++.
T Consensus 60 ----~~~~~~~~~~~~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~p~i~g~~~~~~~~~~~~ 135 (437)
T 4eqs_A 60 ----AYTPEKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFESDITFTLRNLEDT 135 (437)
T ss_dssp ----CCCHHHHHHHHCCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEECCCCCCCTTEECCSSHHHH
T ss_pred ----hcCHHHHHHhcCCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCccccccccCceEEeeccHHHH
Confidence 0011234556799988764 44443 45565532 578999999999999998 8988433 344444
Q ss_pred Hhcc-----CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEE
Q psy14461 235 FRLG-----AWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVI 307 (535)
Q Consensus 235 ~~~~-----~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~ 307 (535)
..++ ..+++++|||||++|+|+|..|+++|.+||++++ +++++.+++++.+.+.+.++++||++ +++++++++
T Consensus 136 ~~l~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~ 215 (437)
T 4eqs_A 136 DAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLNEEINAIN 215 (437)
T ss_dssp HHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTSCGGGGHHHHHHHHHTTCCEEESCCEEEEE
T ss_pred HHHHHhhhccCCcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccccccchhHHHHHHHhhccceEEEeccEEEEec
Confidence 4432 3478999999999999999999999999999999 99999999999999999999999999 999999886
Q ss_pred EeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCC----
Q psy14461 308 SSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVH---- 383 (535)
Q Consensus 308 ~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~---- 383 (535)
.. .+.+ .+|+ ++++|.|++|+|++||++++ +.+|++++++|+|.||+++|||.|||||+|||+.
T Consensus 216 ~~-----~v~~---~~g~--~~~~D~vl~a~G~~Pn~~~~--~~~gl~~~~~G~I~vd~~~~Ts~p~IyA~GDva~~~~~ 283 (437)
T 4eqs_A 216 GN-----EITF---KSGK--VEHYDMIIEGVGTHPNSKFI--ESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYR 283 (437)
T ss_dssp TT-----EEEE---TTSC--EEECSEEEECCCEEESCGGG--TTSSCCCCTTSCEECCTTCBCSSTTEEECGGGEEEEBS
T ss_pred CC-----eeee---cCCe--EEeeeeEEEEeceecCcHHH--HhhhhhhccCCcEecCCCccCCCCCEEEEEEccCcccc
Confidence 42 3566 3787 89999999999999999876 7889999999999999999999999999999983
Q ss_pred -----CCCCcHHHHHHHHHHHHHHHhCCCC-CCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCccc
Q psy14461 384 -----GKPNNASMAAISARLIIERLYGMQD-QLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDN 457 (535)
Q Consensus 384 -----~~~~~~~~A~~~g~~aa~~i~g~~~-~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~ 457 (535)
..+.+++.|.+||++||+||+|.+. ...++..+|++.|++|++++||+||+||++. ++++....+....+
T Consensus 284 ~~~~~~~~~~a~~A~~~g~~~a~ni~g~~~~~~~~~~~~~~~~~~~p~ia~vGlte~~a~~~----~~~~~~~~~~~~~~ 359 (437)
T 4eqs_A 284 HVDLPASVPLAWGAHRAASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQF----DYKMVEVTQGAHAN 359 (437)
T ss_dssp SSSSEECCCSHHHHHHHHHHHHHHHHSCTTCCCCCBCCCEEEEETTEEEEEEESCGGGGGGS----CEEEEEEEEESSCT
T ss_pred cCCccccchhHHHHHHHHHHHHHHHcCCCCcccccceeEEeeeeccceEEEeeCCHHHHHhC----CceEEEEecCCchh
Confidence 0245789999999999999999764 3446777899999999999999999999876 57666554433222
Q ss_pred ccCCCCCcchhhhhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCc-hhHHHHHHHHHHHCCCCHHHHcCC
Q psy14461 458 LLDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQN-VAGMIFGYSLALRKFLTKAELDGT 535 (535)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~-a~e~i~~~~~~i~~~~t~~~l~~~ 535 (535)
.+ + ++++||+||++|++|++|||+|++|++ |.|+|+.+++||++++|++||.++
T Consensus 360 ~~-~-----------------------~~~~g~~Kli~d~~~~~ilGa~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~ 414 (437)
T 4eqs_A 360 YY-P-----------------------GNSPLHLRVYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEF 414 (437)
T ss_dssp TS-S-----------------------SCCEEEEEEEEETTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGC
T ss_pred hc-C-----------------------CCCcEEEEEEEECCCCEEEEEEEECcCCHHHHHHHHHHHHHcCCcHHHHhcC
Confidence 22 2 257899999999999999999999985 999999999999999999999864
No 28
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=7.7e-56 Score=473.62 Aligned_cols=420 Identities=17% Similarity=0.156 Sum_probs=339.9
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccccccc---ccccccc----cccchhh-ccc--ccccccccccCH
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKK---RRLYYPV----AMSDLEL-EQD--STSALNVTIRNW 157 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~---~l~~~~~----~i~~~~~-~~~--~~~~~~~~~~~~ 157 (535)
.++|+|||+|++|+.+|+.+...+.+|+|||+++.+++... .+|.... ....... .+. +........+++
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~~ 84 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKINV 84 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 36899999999999999988888999999999765543210 0110000 0000000 000 110001335688
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcEEEEeEEEEecCCEEEEc---e--eE------EEcceEEEeeCceecCCCCC-
Q psy14461 158 NAATKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLS---N--RS------VTGFNFLLAVERRCLPEPRN- 225 (535)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~---~--~~------~~~d~lViATGs~p~~~i~G- 225 (535)
.++..+....++.+...+...+++.||+++.+++.+.+++.+.+. + .+ +.||+||||||++|+. +||
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p~~-~~g~ 163 (478)
T 1v59_A 85 ANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVTP-FPGI 163 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEESSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEECC-CTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEecCCCcccccccceEEeCEEEECcCCCCCC-CCCC
Confidence 999888888888888777788888999999999888777777763 2 35 9999999999999965 344
Q ss_pred ----CceechhhHHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-c
Q psy14461 226 ----SALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-Q 299 (535)
Q Consensus 226 ----~~v~~~~~~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~ 299 (535)
..++++++++.+...+++++|||||++|+|+|..|+++|.+||++++ +++++.+++++.+.+.+.+++.||++ +
T Consensus 164 ~~~~~~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~ 243 (478)
T 1v59_A 164 EIDEEKIVSSTGALSLKEIPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFKL 243 (478)
T ss_dssp CCCSSSEECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEEC
T ss_pred CCCCceEEcHHHHHhhhccCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEe
Confidence 35889999998888899999999999999999999999999999999 99999999999999999999999999 9
Q ss_pred ceEEEEEEEe-CCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEe
Q psy14461 300 CCVIEKVISS-FDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAV 378 (535)
Q Consensus 300 ~~~v~~i~~~-~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~ 378 (535)
++++++++.. +++.+.+++.+..+|+..++++|.|++|+|++||++.+.++.+|++++++|+|.||+++||+.|+|||+
T Consensus 244 ~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~ 323 (478)
T 1v59_A 244 STKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVIDDQFNSKFPHIKVV 323 (478)
T ss_dssp SEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTCCBCTTSCBCCCTTSBCSSTTEEEC
T ss_pred CCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCceeCCCCCEeECcCCccCCCCEEEe
Confidence 9999999872 134456666421234334799999999999999998444588899999899999999999999999999
Q ss_pred CCcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCcccc
Q psy14461 379 GGIVHGKPNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNL 458 (535)
Q Consensus 379 GD~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~ 458 (535)
|||+ +.+++.+.|.+||++||+||++.. .++++..+|++.|++|++++||+||+||++.+. ++.+...++....+.
T Consensus 324 GD~~-~~~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~--~~~~~~~~~~~~~~~ 399 (478)
T 1v59_A 324 GDVT-FGPMLAHKAEEEGIAAVEMLKTGH-GHVNYNNIPSVMYSHPEVAWVGKTEEQLKEAGI--DYKIGKFPFAANSRA 399 (478)
T ss_dssp GGGS-SSCCCHHHHHHHHHHHHHHHHHSC-CCCCTTSCCEEECSSSEEEEEECCHHHHHHTTC--CEEEEEEEGGGCHHH
T ss_pred eccC-CCcccHHHHHHHHHHHHHHHcCCC-CCCCCCCCCEEEEcCCcEEEEECCHHHHHHcCC--CEEEEEEecccchhh
Confidence 9999 788899999999999999999854 346788899999999999999999999998743 677777666654443
Q ss_pred cCCCCCcchhhhhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCCCHHHHcCC
Q psy14461 459 LDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535 (535)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~~l~~~ 535 (535)
. . .+++.+|+|+++++++++|||+|++|++|.|+|+.++++|++++|++||.++
T Consensus 400 ~-~----------------------~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~ 453 (478)
T 1v59_A 400 K-T----------------------NQDTEGFVKILIDSKTERILGAHIIGPNAGEMIAEAGLALEYGASAEDVARV 453 (478)
T ss_dssp H-H----------------------TTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTS
T ss_pred h-h----------------------cCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhC
Confidence 2 1 1146799999999989999999999999999999999999999999999764
No 29
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.2e-56 Score=475.05 Aligned_cols=412 Identities=17% Similarity=0.205 Sum_probs=339.4
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccc---cccccccc----cccchhhcccc---cc-cccccccCH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRK---KRRLYYPV----AMSDLELEQDS---TS-ALNVTIRNW 157 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~---~~l~~~~~----~i~~~~~~~~~---~~-~~~~~~~~~ 157 (535)
++++|||+|++|+.+|.++...+.+|+|||++ .+++.. +.+|...+ .+......... +. ......++|
T Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 84 (458)
T 1lvl_A 6 TTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ-ALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASPRLDI 84 (458)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCCCCCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCEEEEEccC-CCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCCccCH
Confidence 57899999999999999888888999999994 332210 00111000 00000000000 00 012346789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcEEEEeEEEEecCCEEEEceeEEEcceEEEeeCceecC-C-CCC-CceechhhH
Q psy14461 158 NAATKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLSNRSVTGFNFLLAVERRCLP-E-PRN-SALISADDL 234 (535)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~~~~~~~d~lViATGs~p~~-~-i~G-~~v~~~~~~ 234 (535)
.++..+.++.++.+...+...++..||+++.|++.+.+++++.+.+.++.||+||||||++|+. + +|. ..+++++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~~~~~~d~lviATGs~p~~~~~~~~~~~v~~~~~~ 164 (458)
T 1lvl_A 85 GQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDGKQVEVDGQRIQCEHLLLATGSSSVELPMLPLGGPVISSTEA 164 (458)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEETTEEEETTEEEECSEEEECCCEEECCBTTBCCBTTEECHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEccCCEEEEeeEEEEeCEEEEeCCCCCCCCCCCCccCcEecHHHH
Confidence 9999999999998888888888999999999998888889999877789999999999999987 5 555 468899999
Q ss_pred HhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCC
Q psy14461 235 FRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDG 312 (535)
Q Consensus 235 ~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~ 312 (535)
+.+...+++++|||||++|+|+|..|+++|.+||++++ +++++.+++++.+.+.+.+++.||++ +++++++++. +
T Consensus 165 ~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~---~ 241 (458)
T 1lvl_A 165 LAPKALPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYEN---G 241 (458)
T ss_dssp TCCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEETTCEEEEEET---T
T ss_pred hhhhccCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEe---C
Confidence 98888899999999999999999999999999999999 99999999999999999999999999 9999999975 2
Q ss_pred cEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCCCCCcHHHH
Q psy14461 313 MKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMA 392 (535)
Q Consensus 313 ~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~~~~~~~A 392 (535)
.+.++. .+|++.++++|.|++|+|++||++++.++.+|++++++ +|.||+++||+.|+|||+|||+ +.+.+++.|
T Consensus 242 ~v~v~~---~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~-~i~vd~~~~t~~~~Iya~GD~~-~~~~~~~~A 316 (458)
T 1lvl_A 242 CLLAND---GKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGA-AIAIDERCQTSMHNVWAIGDVA-GEPMLAHRA 316 (458)
T ss_dssp EEEEEC---SSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETT-EECCCTTCBCSSTTEEECGGGG-CSSCCHHHH
T ss_pred CEEEEE---CCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCC-EEeECCCCcCCCCCEEEeeccC-CCcccHHHH
Confidence 244431 35643489999999999999999886668889998877 8999999999999999999999 788999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCcccccCCCCCcchhhhhh
Q psy14461 393 AISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVC 472 (535)
Q Consensus 393 ~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (535)
.+||++||.||+|.. ..+++..+|+++|++|+++++|++|++|++.+. ++.+....+....+.. .
T Consensus 317 ~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~p~~a~vG~~e~~a~~~g~--~~~~~~~~~~~~~~~~-~----------- 381 (458)
T 1lvl_A 317 MAQGEMVAEIIAGKA-RRFEPAAIAAVCFTDPEVVVVGKTPEQASQQGL--DCIVAQFPFAANGRAM-S----------- 381 (458)
T ss_dssp HHHHHHHHHHHTTCC-CCCCCSCCCEEECSSSEEEEEECCHHHHHHTTC--CEEEEEEEGGGCHHHH-H-----------
T ss_pred HHHHHHHHHHhcCCC-ccCCCCCCCEEEECCCCeEEEeCCHHHHHHcCC--CEEEEEEECccchhhh-h-----------
Confidence 999999999999854 456788899999999999999999999998743 6777666665444432 1
Q ss_pred ccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCCCHHHHcCC
Q psy14461 473 LKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535 (535)
Q Consensus 473 ~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~~l~~~ 535 (535)
.+.+.||+|+++|+++++|||+|++|++|.|+|+.++++|++++|++||.++
T Consensus 382 -----------~~~~~g~~kl~~d~~~~~ilG~~~vg~~a~e~i~~~~~ai~~~~~~~~l~~~ 433 (458)
T 1lvl_A 382 -----------LESKSGFVRVVARRDNHLILGWQAVGVAVSELSTAFAQSLEMGACLEDVAGT 433 (458)
T ss_dssp -----------TTCCCCEEEEEEETTTCBEEEEEEEETTGGGHHHHHHHHHHHTCBHHHHHTS
T ss_pred -----------cCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhC
Confidence 1146799999999999999999999999999999999999999999999864
No 30
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=1.4e-55 Score=470.26 Aligned_cols=410 Identities=20% Similarity=0.223 Sum_probs=335.2
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccccccc--c-cccccc----cccchhhccc---ccccccccccCHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKK--R-RLYYPV----AMSDLELEQD---STSALNVTIRNWN 158 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~--~-l~~~~~----~i~~~~~~~~---~~~~~~~~~~~~~ 158 (535)
++|+|||+|++|+++|.++...+.+|+|||++. +++... + +|.... .+.......+ +.. ......+|.
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~ 82 (467)
T 1zk7_A 5 VQVAVIGSGGAAMAAALKAVEQGAQVTLIERGT-IGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIA-ATVPTIDRS 82 (467)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-TTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSC-CCCCCCCHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC-CCccccCCCccchHHHHHHHHHHHHHhhhhhcCCcc-CCCCccCHH
Confidence 578999999999999998888899999999984 322100 0 000000 0000000000 000 113356788
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHhc-CcEEEEeEEEEecCCEEEEc---e--eEEEcceEEEeeCceecC-CCCC---Cc
Q psy14461 159 AATKLIKRFCIRAKN-DSMRELKAL-GIDIVRTAAAFTNPHTIKLS---N--RSVTGFNFLLAVERRCLP-EPRN---SA 227 (535)
Q Consensus 159 ~l~~~~~~~~~~~~~-~~~~~~~~~-gV~~~~g~~~~~~~~~v~~~---~--~~~~~d~lViATGs~p~~-~i~G---~~ 227 (535)
.+..+.++..+.+.. .+...+++. +|+++.+++.+.+.+++++. + .++.||+||||||++|+. ++|| ..
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~i~G~~~~~ 162 (467)
T 1zk7_A 83 KLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPAVPPIPGLKESP 162 (467)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEETTEEEEEETTSSEEEEECSEEEECCCEEECCCCCTTTTTSC
T ss_pred HHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCCCCCCCCCCCCcCc
Confidence 888887777666653 345667777 99999999988888877773 3 579999999999999999 8998 35
Q ss_pred eechhhHHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEE
Q psy14461 228 LISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEK 305 (535)
Q Consensus 228 v~~~~~~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~ 305 (535)
+++.++++.+...+++++|||+|++|+|+|..|+++|.+||++++ +.+++ +++++.+.+.+.+++.||++ ++++|++
T Consensus 163 ~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 241 (467)
T 1zk7_A 163 YWTSTEALASDTIPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR-EDPAIGEAVTAAFRAEGIEVLEHTQASQ 241 (467)
T ss_dssp CBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT-SCHHHHHHHHHHHHHTTCEEETTCCEEE
T ss_pred eecHHHHhcccccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC-CCHHHHHHHHHHHHhCCCEEEcCCEEEE
Confidence 789999999888899999999999999999999999999999999 99999 99999999999999999999 9999999
Q ss_pred EEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCCC
Q psy14461 306 VISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGK 385 (535)
Q Consensus 306 i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~ 385 (535)
++.+ ++.+.|++ ++. ++++|.|++|+|++||++.+.++..+++++++|+|.||++++|+.|+|||+|||+ +.
T Consensus 242 i~~~-~~~~~v~~----~~~--~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~-~~ 313 (467)
T 1zk7_A 242 VAHM-DGEFVLTT----THG--ELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRTSNPNIYAAGDCT-DQ 313 (467)
T ss_dssp EEEE-TTEEEEEE----TTE--EEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBCSSTTEEECSTTB-SS
T ss_pred EEEe-CCEEEEEE----CCc--EEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECCCcccCCCCEEEEeccC-CC
Confidence 9875 44455665 344 7999999999999999987656788999988999999999999999999999999 78
Q ss_pred CCcHHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCcccccCCCCCc
Q psy14461 386 PNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPE 465 (535)
Q Consensus 386 ~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (535)
+.+++.|.+||++||.||++.. ...++..+|++.|++|+++++|+++++|++.+. ++.+...++....+.. ..
T Consensus 314 ~~~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~a~vG~~~~~a~~~g~--~~~~~~~~~~~~~~~~-~~--- 386 (467)
T 1zk7_A 314 PQFVYVAAAAGTRAAINMTGGD-AALDLTAMPAVVFTDPQVATVGYSEAEAHHDGI--ETDSRTLTLDNVPRAL-AN--- 386 (467)
T ss_dssp CCCHHHHHHHHHHHHHHHTTCC-CCCCCTTCEEEECSSSEEEEEECCHHHHHHTTC--CEEEEEEEGGGCHHHH-HT---
T ss_pred cccHHHHHHHHHHHHHHHcCCC-cccCCCCCCEEEecCCceEEEecCHHHHHhcCC--CeEEEEEecccchhhh-hc---
Confidence 8899999999999999999863 456778899999999999999999999998743 6777777776554443 11
Q ss_pred chhhhhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCCCHHHHcCC
Q psy14461 466 NFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535 (535)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~~l~~~ 535 (535)
+++.+|+|+++++++++|||+|++|++|.|+|+.++++|++++|++||.++
T Consensus 387 -------------------~~~~~~~kl~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~ 437 (467)
T 1zk7_A 387 -------------------FDTRGFIKLVIEEGSHRLIGVQAVAPEAGELIQTAALAIRNRMTVQELADQ 437 (467)
T ss_dssp -------------------TCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTS
T ss_pred -------------------CCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcC
Confidence 146899999999999999999999999999999999999999999999864
No 31
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=1.8e-55 Score=467.76 Aligned_cols=414 Identities=18% Similarity=0.186 Sum_probs=342.8
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccccccc--c-ccccccc-ccchhhcc--ccccc-ccccccCHHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKK--R-RLYYPVA-MSDLELEQ--DSTSA-LNVTIRNWNAAT 161 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~--~-l~~~~~~-i~~~~~~~--~~~~~-~~~~~~~~~~l~ 161 (535)
++++|||+|++|+.+|.++...+.+|+|||+++.+++... + +|....- ........ ..+.. ......+|..+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 81 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLPALM 81 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHHHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHHHHH
Confidence 5899999999999999988888999999999976543210 0 1110000 00000000 00000 112356899999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCcEEEEeEEEEecCCEEEEc--eeEEEcceEEEeeCceecC-CCCC---CceechhhHH
Q psy14461 162 KLIKRFCIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLS--NRSVTGFNFLLAVERRCLP-EPRN---SALISADDLF 235 (535)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~--~~~~~~d~lViATGs~p~~-~i~G---~~v~~~~~~~ 235 (535)
.+.+.+.+.+...+...++..+|+++.+++.+.+++++.+. +.++.||+||||||++|.. +++| ..++++++++
T Consensus 82 ~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~g~~~~~d~lviAtG~~p~~~~~~g~~~~~v~~~~~~~ 161 (455)
T 2yqu_A 82 AHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSERKVLVEETGEELEARYILIATGSAPLIPPWAQVDYERVVTSTEAL 161 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTCCEEEEEEEEECCCEEECCCTTBCCCSSSEECHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEeeCCEEEEecEEEECCCCCCCCCCCCCCCcCcEechHHhh
Confidence 98888888887777788888899999999888888888885 5689999999999999988 8888 3688999999
Q ss_pred hccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCc
Q psy14461 236 RLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGM 313 (535)
Q Consensus 236 ~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~ 313 (535)
.+...+++++|||||++|+|+|..|++.|.+|+++++ +.+++.+++++.+.+.+.+++.||++ +++++++++.+ ++.
T Consensus 162 ~~~~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~-~~~ 240 (455)
T 2yqu_A 162 SFPEVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPE-AKG 240 (455)
T ss_dssp CCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEE-TTE
T ss_pred ccccCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEEe-CCE
Confidence 8888889999999999999999999999999999999 99999999999999999999999999 99999999876 455
Q ss_pred EEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCCCCCcHHHHH
Q psy14461 314 KGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAA 393 (535)
Q Consensus 314 ~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~~~~~~~A~ 393 (535)
+.+++. +|+ ++++|.|++|+|++|++++++++.++++++++|+|.||++++|+.|+|||+|||+ +.+.+++.|.
T Consensus 241 v~v~~~---~g~--~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd~~~~t~~~~iya~GD~~-~~~~~~~~A~ 314 (455)
T 2yqu_A 241 ARVELE---GGE--VLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEHLRTRVPHIYAIGDVV-RGPMLAHKAS 314 (455)
T ss_dssp EEEEET---TSC--EEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCCTTSBCSSTTEEECGGGS-SSCCCHHHHH
T ss_pred EEEEEC---CCe--EEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeECCCcccCCCCEEEEecCC-CCccCHHHHH
Confidence 666663 566 7999999999999999988656788999888899999999999999999999999 8889999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCcccccCCCCCcchhhhhhc
Q psy14461 394 ISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCL 473 (535)
Q Consensus 394 ~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (535)
+||++||.||++.. ..+++..+|++.|++|+++++|+++++|++.+. ++.+....+....++. .
T Consensus 315 ~~g~~aa~~i~~~~-~~~~~~~~p~~~~~~~~~a~~G~~~~~a~~~g~--~~~~~~~~~~~~~~~~-~------------ 378 (455)
T 2yqu_A 315 EEGIAAVEHMVRGF-GHVDYQAIPSVVYTHPEIAAVGYTEEELKAQGI--PYKVGKFPYSASGRAR-A------------ 378 (455)
T ss_dssp HHHHHHHHHHHHSC-CCCCGGGCCEEECSSSEEEEEECCHHHHHHHTC--CEEEEEEEGGGCHHHH-H------------
T ss_pred HhHHHHHHHHcCCC-ccCCCCCCCEEEEcCCceEEEECCHHHHHHcCC--CEEEEEEEcccchHHH-h------------
Confidence 99999999999853 456777889999999999999999999998843 6777666665444432 0
Q ss_pred cCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCCCHHHHcCC
Q psy14461 474 KGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535 (535)
Q Consensus 474 ~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~~l~~~ 535 (535)
.+++.+|+|+++|+++++|||+|++|+.|.|+|+.++++|++++|++||.++
T Consensus 379 ----------~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~~~~~ 430 (455)
T 2yqu_A 379 ----------MGETEGFIKVLAHAKTDRILGVHGIGARVGDVLAEAALALFFKASAEDLGRA 430 (455)
T ss_dssp ----------HTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHS
T ss_pred ----------cCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhc
Confidence 1146799999999999999999999999999999999999999999998753
No 32
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=2e-55 Score=475.11 Aligned_cols=418 Identities=20% Similarity=0.173 Sum_probs=326.1
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccccccc--c-ccccccc-ccc---hhhcccccccccccccCHHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKK--R-RLYYPVA-MSD---LELEQDSTSALNVTIRNWNAAT 161 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~--~-l~~~~~~-i~~---~~~~~~~~~~~~~~~~~~~~l~ 161 (535)
++|+|||+|++|+.+|..+...+.+|+|||+++.+++... + +|...+. .+. .....+.+.. |..+.
T Consensus 44 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~-------~~~~~ 116 (523)
T 1mo9_A 44 YDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYW-------FPDMT 116 (523)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTT-------CCCCT
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCc-------HHHHH
Confidence 6789999999999999988888999999999985533210 0 1211000 000 0000000000 11111
Q ss_pred HH---HHHHHHHHHHHHH---HHH-----HhcCcEEE-EeEEEEecCCEEEEceeEEEcceEEEeeCceecC-CCCC---
Q psy14461 162 KL---IKRFCIRAKNDSM---REL-----KALGIDIV-RTAAAFTNPHTIKLSNRSVTGFNFLLAVERRCLP-EPRN--- 225 (535)
Q Consensus 162 ~~---~~~~~~~~~~~~~---~~~-----~~~gV~~~-~g~~~~~~~~~v~~~~~~~~~d~lViATGs~p~~-~i~G--- 225 (535)
.+ .+.....+...+. ..+ +..+|+++ .+++.+++.+++.+.+..+.||+||||||++|.. ++||
T Consensus 117 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~v~~~g~~~~~d~lViATGs~p~~p~i~G~~~ 196 (523)
T 1mo9_A 117 EKVVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDNHTVEAAGKVFKAKNLILAVGAGPGTLDVPGVNA 196 (523)
T ss_dssp TCCCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEETTEEEETTEEEEBSCEEECCCEECCCCCSTTTTS
T ss_pred hhhhhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeCCEEEECCEEEEeCEEEECCCCCCCCCCCCCccc
Confidence 11 2233333333223 455 77899998 8888888888888877789999999999999998 8998
Q ss_pred CceechhhHH-hccCCC-CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cce
Q psy14461 226 SALISADDLF-RLGAWP-GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCC 301 (535)
Q Consensus 226 ~~v~~~~~~~-~~~~~~-k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~ 301 (535)
.+++++++++ .+...+ ++++|||+|++|+|+|..|++.|.+|+++++ +.+++.+++++.+.+.+.+++.||++ +++
T Consensus 197 ~~v~~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~ 276 (523)
T 1mo9_A 197 KGVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLIKDNETRAYVLDRMKEQGMEIISGS 276 (523)
T ss_dssp BTEEEHHHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTCCSHHHHHHHHHHHHHTTCEEESSC
T ss_pred CcEeeHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccccccHHHHHHHHHHHHhCCcEEEECC
Confidence 3488999999 888778 9999999999999999999999999999999 99999999999999999999999999 999
Q ss_pred EEEEEEEeCCCc---EEEEEecCCCCCceEEEcCEEEEccCCCCCCC-CCCccccCeeecCCCceEcCCCCCcCCCCEEE
Q psy14461 302 VIEKVISSFDGM---KGVRGFHPESKEPFADVFKTVVNAMEKKFDFA-ALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFA 377 (535)
Q Consensus 302 ~v~~i~~~~~~~---~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~-~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA 377 (535)
+|++++.++++. +.|++ .+|+ .++++|.|++|+|++||++ ++ +.+|++++++|+|.||+++||+.|+|||
T Consensus 277 ~V~~i~~~~~~~v~~~~v~~---~~G~-~~i~aD~Vv~A~G~~p~~~~~l--~~~gl~~~~~G~i~Vd~~~~t~~~~IyA 350 (523)
T 1mo9_A 277 NVTRIEEDANGRVQAVVAMT---PNGE-MRIETDFVFLGLGEQPRSAELA--KILGLDLGPKGEVLVNEYLQTSVPNVYA 350 (523)
T ss_dssp EEEEEEECTTSBEEEEEEEE---TTEE-EEEECSCEEECCCCEECCHHHH--HHHTCCBCTTSCBCCCTTSBCSSTTEEE
T ss_pred EEEEEEEcCCCceEEEEEEE---CCCc-EEEEcCEEEECcCCccCCccCH--HHcCCccCCCCCEEECCCCccCCCCEEE
Confidence 999998753333 45665 3563 3699999999999999998 55 7789999889999999999999999999
Q ss_pred eCCcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCC---
Q psy14461 378 VGGIVHGKPNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPT--- 454 (535)
Q Consensus 378 ~GD~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~--- 454 (535)
+|||+ +.+.+++.|.+||++||.||+|.. ..+++..+|+++|++|++++||+||+||++.+. ++.+...++..
T Consensus 351 ~GD~~-~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~--~~~~~~~~~~~~~~ 426 (523)
T 1mo9_A 351 VGDLI-GGPMEMFKARKSGCYAARNVMGEK-ISYTPKNYPDFLHTHYEVSFLGMGEEEARAAGH--EIVTIKMPPDTENG 426 (523)
T ss_dssp CGGGG-CSSCSHHHHHHHHHHHHHHHTTCC-CCCCCCSCCEEEESSSEEEEEECCHHHHHHTTC--CEEEEEESCCSTTT
T ss_pred EeecC-CCcccHHHHHHHHHHHHHHHcCCC-CCCCCCCCCeEEECCCceEEEeCCHHHHHhCCC--CEEEEEEecccccc
Confidence 99999 888999999999999999999854 445678899999999999999999999998854 67777666654
Q ss_pred cccccCCCCCcchhhhhhccCCcccccccc--cCcceEEEEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCCCHHHH
Q psy14461 455 FDNLLDPLLPENFVKLVCLKGGERVLGIHV--IGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAEL 532 (535)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~~l 532 (535)
...+. |.++. +.-++... +++.||+|+++|+++++|||+|++|++|.|+|+.+++||++++|++||
T Consensus 427 ~~~~~-~~~~~-----------~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l 494 (523)
T 1mo9_A 427 LNVAL-PASDR-----------TMLYAFGKGTAHMSGFQKIVIDAKTRKVLGAHHVGYGAKDAFQYLNVLIKQGLTVDEL 494 (523)
T ss_dssp TCSSC-SCCTT-----------THHHHHSTTTGGGGCEEEEEEETTTCBEEEEEEEESSCHHHHHHHHHHHHTTCBHHHH
T ss_pred ccccc-ccccc-----------cccceEEeecCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHH
Confidence 00111 21110 00011112 257899999999999999999999999999999999999999999999
Q ss_pred cCC
Q psy14461 533 DGT 535 (535)
Q Consensus 533 ~~~ 535 (535)
.++
T Consensus 495 ~~~ 497 (523)
T 1mo9_A 495 GDM 497 (523)
T ss_dssp HTS
T ss_pred HhC
Confidence 764
No 33
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=2.1e-54 Score=458.92 Aligned_cols=384 Identities=18% Similarity=0.144 Sum_probs=296.8
Q ss_pred EEEEeeCCccHHHHHHHHHhhC--CCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTN--QRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKR 166 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~--~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (535)
.+|+|||+|++|+.+|..+... +.+|+|||+++.+++.++++|++ +.+. .++..+..+..
T Consensus 4 ~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~---~~~~--------------~~~~~~~~~~~- 65 (449)
T 3kd9_A 4 KKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYV---VEGL--------------STPDKLMYYPP- 65 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------------------------
T ss_pred CcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccc---cCCC--------------CCHHHhhhcCH-
Confidence 4789999999999999766554 78999999999988888888776 2321 11111111111
Q ss_pred HHHHHHHHHHHHHHhcCcEEEEe-EEEEecCCEEEE--ce--eEEEcceEEEeeCceecC-CCCC---Ccee---chhhH
Q psy14461 167 FCIRAKNDSMRELKALGIDIVRT-AAAFTNPHTIKL--SN--RSVTGFNFLLAVERRCLP-EPRN---SALI---SADDL 234 (535)
Q Consensus 167 ~~~~~~~~~~~~~~~~gV~~~~g-~~~~~~~~~v~~--~~--~~~~~d~lViATGs~p~~-~i~G---~~v~---~~~~~ 234 (535)
....+..+|+++.+ ++..++.....+ .+ .++.||+||||||++|+. ++|| ++++ +.++.
T Consensus 66 ---------~~~~~~~gi~v~~~~~v~~i~~~~~~v~~~~g~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~ 136 (449)
T 3kd9_A 66 ---------EVFIKKRGIDLHLNAEVIEVDTGYVRVRENGGEKSYEWDYLVFANGASPQVPAIEGVNLKGVFTADLPPDA 136 (449)
T ss_dssp ---------CTHHHHTTCEEETTCEEEEECSSEEEEECSSSEEEEECSEEEECCCEEECCCSCBTTTSTTEECSCSTHHH
T ss_pred ---------HHHHHhcCcEEEecCEEEEEecCCCEEEECCceEEEEcCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHH
Confidence 12235679999988 676666554333 33 479999999999999998 8888 3454 34555
Q ss_pred HhccC-----CCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCcc-CcHHHHHHHHHhhhcCCeEE-cceEEEEE
Q psy14461 235 FRLGA-----WPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKH-FDQEMVRILLSSLTKAGVSI-QCCVIEKV 306 (535)
Q Consensus 235 ~~~~~-----~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~-~~~~~~~~~~~~l~~~gV~i-~~~~v~~i 306 (535)
+.+.. .+++++|||+|++|+|+|..|+++|.+|+++++ +++++. +++++.+.+.+.+++. |++ .++.+.++
T Consensus 137 ~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~-v~i~~~~~v~~i 215 (449)
T 3kd9_A 137 LAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRSFDKEVTDILEEKLKKH-VNLRLQEITMKI 215 (449)
T ss_dssp HHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHTTT-SEEEESCCEEEE
T ss_pred HHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhC-cEEEeCCeEEEE
Confidence 44332 568999999999999999999999999999999 999986 9999999999999999 999 99999999
Q ss_pred EEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCC---
Q psy14461 307 ISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVH--- 383 (535)
Q Consensus 307 ~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~--- 383 (535)
+.+ +.+...+. +|+ ++++|.|++|+|++|+++++ +.+|++++++|+|.||+++||+.|+|||+|||+.
T Consensus 216 ~~~--~~v~~v~~---~g~--~i~~D~Vv~a~G~~p~~~l~--~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~ 286 (449)
T 3kd9_A 216 EGE--ERVEKVVT---DAG--EYKAELVILATGIKPNIELA--KQLGVRIGETGAIWTNEKMQTSVENVYAAGDVAETRH 286 (449)
T ss_dssp ECS--SSCCEEEE---TTE--EEECSEEEECSCEEECCHHH--HHTTCCBCTTSSBCCCTTCBCSSTTEEECSTTBCEEB
T ss_pred ecc--CcEEEEEe---CCC--EEECCEEEEeeCCccCHHHH--HhCCccCCCCCCEEECCCCccCCCCEEEeeeeeeecc
Confidence 864 23332332 565 79999999999999999875 7889999999999999999999999999999973
Q ss_pred ---CC---CCcHHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCccc
Q psy14461 384 ---GK---PNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDN 457 (535)
Q Consensus 384 ---~~---~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~ 457 (535)
+. +++++.|.+||++||+||+|.......+..+|++.|++|++++||+||+||++.+. ++.+.. +....+
T Consensus 287 ~~~g~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~g~--~~~~~~--~~~~~~ 362 (449)
T 3kd9_A 287 VITGRRVWVPLAPAGNKMGYVAGSNIAGKELHFPGVLGTAVTKFMDVEIGKTGLTEMEALKEGY--DVRTAF--IKASTR 362 (449)
T ss_dssp TTTCSEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTC--CEEEEE--EEEESS
T ss_pred ccCCceEEeccHHHHHHHHHHHHHHhcCCCccCCCcccceEEEEcCcEEEEecCCHHHHHHCCC--ceEEEE--EecCCc
Confidence 22 57899999999999999999765544555678999999999999999999998733 455443 332233
Q ss_pred ccCCCCCcchhhhhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCCCHHHHcCC
Q psy14461 458 LLDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535 (535)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~~l~~~ 535 (535)
+. .. .+++.||+||++|++|++|||+|++|++|.|+|+.+++||++++|++||.++
T Consensus 363 ~~-~~---------------------~~~~~~~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~ 418 (449)
T 3kd9_A 363 PH-YY---------------------PGGREIWLKGVVDNETNRLLGVQVVGSDILPRIDTAAAMLMAGFTTKDAFFT 418 (449)
T ss_dssp CT-TS---------------------TTCCEEEEEEEEETTTCBEEEEEEEESSCHHHHHHHHHHHHTTCBHHHHHTC
T ss_pred cc-cC---------------------CCCceEEEEEEEECCCCEEEEEEEEChHHHHHHHHHHHHHHcCCcHHHHhhc
Confidence 22 00 0146899999999999999999999999999999999999999999999864
No 34
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=4.8e-54 Score=456.43 Aligned_cols=380 Identities=18% Similarity=0.157 Sum_probs=298.8
Q ss_pred EEEEeeCCccHHHHHHHHHhhC--CCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTN--QRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKR 166 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~--~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (535)
++|+|||+|++|+++|..+... +.+|+|||+++.++|.+++++++ +.+.. .++..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~---~~~~~-------------~~~~~------- 59 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAY---FNHTI-------------NELHE------- 59 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC--------------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhh---hcCCC-------------CCHHH-------
Confidence 4789999999999999876655 89999999999998888887766 33210 01111
Q ss_pred HHHHHHHHHHHHHHhcCcEEEEe-EEEEe--cCCEEEE----ceeEEEcceEEEeeCceecC-CCCC---CceechhhH-
Q psy14461 167 FCIRAKNDSMRELKALGIDIVRT-AAAFT--NPHTIKL----SNRSVTGFNFLLAVERRCLP-EPRN---SALISADDL- 234 (535)
Q Consensus 167 ~~~~~~~~~~~~~~~~gV~~~~g-~~~~~--~~~~v~~----~~~~~~~d~lViATGs~p~~-~i~G---~~v~~~~~~- 234 (535)
+.......+++.+++++.+ ++..+ +.+.+.+ ++.++.||+||||||++|.. ++|| +.+++..++
T Consensus 60 ----~~~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~ 135 (452)
T 3oc4_A 60 ----ARYITEEELRRQKIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGASQFSTQIRGSQTEKLLKYKFLS 135 (452)
T ss_dssp -----CCCCHHHHHHTTEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCCCBCCCCCBTTTCTTEEEGGGCC
T ss_pred ----hhcCCHHHHHHCCCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCcccCCCCCCCCCCCCEEEeCCHH
Confidence 1111224456689998754 34443 4567766 33689999999999999998 8998 456655432
Q ss_pred -----HhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCcc-CcHHHHHHHHHhhhcCCeEE-cceEEEEE
Q psy14461 235 -----FRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKH-FDQEMVRILLSSLTKAGVSI-QCCVIEKV 306 (535)
Q Consensus 235 -----~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~-~~~~~~~~~~~~l~~~gV~i-~~~~v~~i 306 (535)
+.....+++++|||+|++|+|+|..|+++|.+||++++ +++++. +++++.+.+.+.++++||++ +++.|+++
T Consensus 136 ~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i 215 (452)
T 3oc4_A 136 GALAAVPLLENSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFHFEETVLGI 215 (452)
T ss_dssp ----CCHHHHTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEEEEETCCEEEE
T ss_pred HHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccccCCHHHHHHHHHHHHHcCCEEEeCCEEEEE
Confidence 23335689999999999999999999999999999999 999885 89999999999999999999 99999999
Q ss_pred EEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCCC-
Q psy14461 307 ISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGK- 385 (535)
Q Consensus 307 ~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~- 385 (535)
+.. ++.+.|.+ ++| ++++|.|++|+|++||++++ +.. ++++++|+|.||+++||+.|+|||+|||+ +.
T Consensus 216 ~~~-~~~v~v~~---~~g---~i~aD~Vv~A~G~~p~~~~l--~~~-~~~~~~g~i~vd~~~~t~~~~IyA~GD~~-~~~ 284 (452)
T 3oc4_A 216 EET-ANGIVLET---SEQ---EISCDSGIFALNLHPQLAYL--DKK-IQRNLDQTIAVDAYLQTSVPNVFAIGDCI-SVM 284 (452)
T ss_dssp EEC-SSCEEEEE---SSC---EEEESEEEECSCCBCCCSSC--CTT-SCBCTTSCBCCCTTCBCSSTTEEECGGGB-CEE
T ss_pred Ecc-CCeEEEEE---CCC---EEEeCEEEECcCCCCChHHH--Hhh-hccCCCCCEEECcCccCCCCCEEEEEeeE-Eec
Confidence 865 45566665 234 69999999999999999986 443 78888999999999999999999999999 43
Q ss_pred ---------CCcHHHHHHHHHHHHHHHhCCCCCCC-CCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCc
Q psy14461 386 ---------PNNASMAAISARLIIERLYGMQDQLM-DYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTF 455 (535)
Q Consensus 386 ---------~~~~~~A~~~g~~aa~~i~g~~~~~~-~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~ 455 (535)
+++++.|..||++||+||++...... .+..+|+.+| +|++++||+||+||++.+. ++.+....+..
T Consensus 285 ~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~-~~~~a~vG~te~~a~~~g~--~~~~~~~~~~~- 360 (452)
T 3oc4_A 285 NEPVAETFYAPLVNNAVRTGLVVANNLEEKTHRFIGSLRTMGTKVG-DYYLASTGLTETEGLFFPQ--TLASIIVRQPA- 360 (452)
T ss_dssp EGGGTEEECCCCHHHHHHHHHHHTTSSSSCCCCCCCCCCCEEEEET-TEEEEEEECCSGGGGGSSS--CEEEEEEEEEC-
T ss_pred cccCCceeecchHHHHHHHHHHHHHHhcCCCccCCCccccEEEEEc-CeeEEEecCCHHHHHHCCC--ceEEEEEecCC-
Confidence 35899999999999999998654332 4566788888 5799999999999998733 66665544432
Q ss_pred ccccCCCCCcchhhhhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcC-chhHHHHHHHHHHHCCCCHHHHcC
Q psy14461 456 DNLLDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQ-NVAGMIFGYSLALRKFLTKAELDG 534 (535)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~-~a~e~i~~~~~~i~~~~t~~~l~~ 534 (535)
+.+ +. .+.||+||++|++|++|||+|++|+ +|.|+|+.+++||++++|++||.+
T Consensus 361 -~~~-~~-----------------------~~~~~~kli~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~ 415 (452)
T 3oc4_A 361 -PPL-QH-----------------------GTEILGKLIYDKVTQRVLGAQLCSKNNCLEKINTLALSIQTGQTLTDLLQ 415 (452)
T ss_dssp -TTT-TC-----------------------SCEEEEEEEEETTTCBEEEEEEEESSCCTHHHHHHHHHHHTTCBHHHHHT
T ss_pred -ccC-CC-----------------------CCeEEEEEEEECCCCEEEEEEEEeCCCHHHHHHHHHHHHHcCCCHHHHHh
Confidence 222 21 4689999999999999999999999 799999999999999999999976
Q ss_pred C
Q psy14461 535 T 535 (535)
Q Consensus 535 ~ 535 (535)
+
T Consensus 416 ~ 416 (452)
T 3oc4_A 416 K 416 (452)
T ss_dssp C
T ss_pred h
Confidence 4
No 35
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=2.3e-53 Score=453.64 Aligned_cols=393 Identities=17% Similarity=0.138 Sum_probs=286.5
Q ss_pred EEEEeeCCccHHHHHHHHHhhC--CCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTN--QRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKR 166 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~--~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (535)
.+|+|||+|++|+++|..+... +.+|+|||+++.++|.++++|++ +++... +...+.....
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~---~~g~~~-------------~~~~~~~~~~- 66 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYY---VSGEVS-------------NIESLQATPY- 66 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC----------------------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchh---hcCCCC-------------chHHhccccc-
Confidence 4789999999999999876655 89999999999999988888876 443210 1111100000
Q ss_pred HHHHHHHHHHHHHHhcCcEEEEe-EEEEe--cCCEEEEce------eEEEcceEEEeeCceecC-CCCC---Ccee---c
Q psy14461 167 FCIRAKNDSMRELKALGIDIVRT-AAAFT--NPHTIKLSN------RSVTGFNFLLAVERRCLP-EPRN---SALI---S 230 (535)
Q Consensus 167 ~~~~~~~~~~~~~~~~gV~~~~g-~~~~~--~~~~v~~~~------~~~~~d~lViATGs~p~~-~i~G---~~v~---~ 230 (535)
.+........+..+++++.+ ++..+ +.+.+.+.+ .++.||+||||||++|.. ++|| +.++ +
T Consensus 67 ---~~~~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~ 143 (472)
T 3iwa_A 67 ---NVVRDPEFFRINKDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTN 143 (472)
T ss_dssp -----------------CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCSCTTTTSBTEEECCS
T ss_pred ---hhccCHHHHhhhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcCCCCCCCCCCCCEEEeCC
Confidence 00111112223468888654 44443 356676642 379999999999999998 8988 2333 3
Q ss_pred hhhHHhcc-----CCCCcEEEECCChHHHHHHHHHHhC-CCcEEEEEc-CcCCc-cCcHHHHHHHHHhhhcCCeEE-cce
Q psy14461 231 ADDLFRLG-----AWPGKTLVLGGSLMAVEIAATLNFL-GVPVTLVYS-RRLLK-HFDQEMVRILLSSLTKAGVSI-QCC 301 (535)
Q Consensus 231 ~~~~~~~~-----~~~k~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~-~~~l~-~~~~~~~~~~~~~l~~~gV~i-~~~ 301 (535)
.++...+. ..+++++|||+|++|+|+|..|++. |.+|+++++ +.+++ .+++++.+.+.+.+++.||++ +++
T Consensus 144 ~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~ 223 (472)
T 3iwa_A 144 LDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGE 223 (472)
T ss_dssp HHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHHHHHHHHHHHHHTTCEEECSC
T ss_pred HHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccccCHHHHHHHHHHHHhcCCEEEeCC
Confidence 44554443 4589999999999999999999999 999999999 99998 899999999999999999999 999
Q ss_pred EEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCc
Q psy14461 302 VIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGI 381 (535)
Q Consensus 302 ~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~ 381 (535)
+|++++.+ ++.+.+++. +|+ ++++|.|++|+|++|+++++ +.+|++++++|+|.||++++|+.|+|||+|||
T Consensus 224 ~v~~i~~~-~~~v~v~~~---~g~--~i~aD~Vv~a~G~~p~~~l~--~~~gl~~~~~g~i~vd~~~~t~~~~Iya~GD~ 295 (472)
T 3iwa_A 224 KVVRLEGE-NGKVARVIT---DKR--TLDADLVILAAGVSPNTQLA--RDAGLELDPRGAIIVDTRMRTSDPDIFAGGDC 295 (472)
T ss_dssp CEEEEEES-SSBEEEEEE---SSC--EEECSEEEECSCEEECCHHH--HHHTCCBCTTCCEECCTTCBCSSTTEEECGGG
T ss_pred EEEEEEcc-CCeEEEEEe---CCC--EEEcCEEEECCCCCcCHHHH--HhCCccCCCCCCEEECCCcccCCCCEEEeccc
Confidence 99999875 466777774 676 89999999999999999865 67889999999999999999999999999999
Q ss_pred CC------CC---CCcHHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEec
Q psy14461 382 VH------GK---PNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSY 452 (535)
Q Consensus 382 ~~------~~---~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~ 452 (535)
+. +. +.+++.|.+||++||+||+|...........+++.|++|++++||+||+||++.+. ++.+...
T Consensus 296 ~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~a~vG~~e~~a~~~g~--~~~~~~~-- 371 (472)
T 3iwa_A 296 VTIPNLVTGKPGFFPLGSMANRQGRVIGTNLADGDATFPGAVGSWAVKLFEGSASGAGLTVEGALREGY--DAVNVHV-- 371 (472)
T ss_dssp EEEEBTTTSSEECCCCTTHHHHHHHHHHHHHTTCCCCCCCBCCCEEEECSSCEEEEEECCHHHHHHTTC--CEEEEEE--
T ss_pred eecccccCCceeecchHHHHHHHHHHHHHHhcCCCccCCCCCcceEEEECCceeEEEECCHHHHHHcCC--ceEEEEE--
Confidence 83 21 35788999999999999999765433333445677999999999999999998833 5555433
Q ss_pred CCcccccCCCCCcchhhhhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcC---chhHHHHHHHHHHHCCCCH
Q psy14461 453 PTFDNLLDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQ---NVAGMIFGYSLALRKFLTK 529 (535)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~---~a~e~i~~~~~~i~~~~t~ 529 (535)
....++. .. .+++.||+||++|++|++|||+|++|+ +|.|+|+.+++||++++|+
T Consensus 372 ~~~~~~~-~~---------------------~~~~~~~~kli~~~~~~~ilG~~~~g~~~~~~~~~i~~~~~ai~~~~t~ 429 (472)
T 3iwa_A 372 EQFDRAH-FY---------------------PEKTIMTLQLVVDRPTRRVLGIQGFSTLGDALTARINAVATMLASKPTV 429 (472)
T ss_dssp EC---------------------------------CEEEEEEEETTTCBEEEEEEEESCHHHHHHHHHHHHHHHTTCCBH
T ss_pred ecCCccC-cc---------------------CCCceEEEEEEEECCCCEEEEEEEECCCcccHHHHHHHHHHHHHcCCCH
Confidence 3323322 00 025789999999999999999999999 4699999999999999999
Q ss_pred HHHcCC
Q psy14461 530 AELDGT 535 (535)
Q Consensus 530 ~~l~~~ 535 (535)
+||.++
T Consensus 430 ~~l~~~ 435 (472)
T 3iwa_A 430 EDISNA 435 (472)
T ss_dssp HHHHTC
T ss_pred HHHhcc
Confidence 999864
No 36
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=7.5e-53 Score=459.73 Aligned_cols=388 Identities=16% Similarity=0.126 Sum_probs=304.5
Q ss_pred EEEEeeCCccHHHHHHHHHhhC--CCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTN--QRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKR 166 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~--~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (535)
.+|+|||+|++|+++|..+... +.+|+|||+++.++|.++++|++ +++.... . ......+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~---~~~~~~~--~----~~~~~~~--------- 63 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYH---ISGEIAQ--R----SALVLQT--------- 63 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHH---HTSSSCC--G----GGGBCCC---------
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHH---hcCCcCC--h----HHhhccC---------
Confidence 3689999999999999766554 78999999999998888888765 3321000 0 0000111
Q ss_pred HHHHHHHHHHHHHHhcCcEEEEe-EEEEe--cCCEEEEce------eEEEcceEEEeeCceecC-CCCC---Cceechhh
Q psy14461 167 FCIRAKNDSMRELKALGIDIVRT-AAAFT--NPHTIKLSN------RSVTGFNFLLAVERRCLP-EPRN---SALISADD 233 (535)
Q Consensus 167 ~~~~~~~~~~~~~~~~gV~~~~g-~~~~~--~~~~v~~~~------~~~~~d~lViATGs~p~~-~i~G---~~v~~~~~ 233 (535)
.....+..+++++.+ ++..+ +.+.+.+.+ .++.||+||||||++|+. ++|| ..+++..+
T Consensus 64 --------~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~ipG~~~~~v~~~~~ 135 (565)
T 3ntd_A 64 --------PESFKARFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVPPIPGVDNPLTHSLRN 135 (565)
T ss_dssp --------HHHHHHHHCCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTCCSTTEECCSS
T ss_pred --------HHHHHHhcCcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCCCCCCCCCCCCCEEEeCC
Confidence 112233468888643 44443 356677642 379999999999999999 8998 34555433
Q ss_pred HH---hc-----cCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEE
Q psy14461 234 LF---RL-----GAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVI 303 (535)
Q Consensus 234 ~~---~~-----~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v 303 (535)
+. .+ ...+++|+|||+|++|+|+|..|++.|.+||++++ +.+++.+++++.+.+.+.+++.||++ +++.+
T Consensus 136 ~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v 215 (565)
T 3ntd_A 136 IPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTPVDREMAGFAHQAIRDQGVDLRLGTAL 215 (565)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEETCCE
T ss_pred HHHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchhcCHHHHHHHHHHHHHCCCEEEeCCeE
Confidence 22 22 24578999999999999999999999999999999 99999999999999999999999999 99999
Q ss_pred EEEEEe------------------CCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcC
Q psy14461 304 EKVISS------------------FDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCN 365 (535)
Q Consensus 304 ~~i~~~------------------~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd 365 (535)
++++.. .++.+.+.+ .+|+ ++++|.|++|+|++|+++++ +.+|++++++|+|.||
T Consensus 216 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~g~--~i~~D~vi~a~G~~p~~~l~--~~~g~~~~~~g~i~vd 288 (565)
T 3ntd_A 216 SEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTL---SNGE--LLETDLLIMAIGVRPETQLA--RDAGLAIGELGGIKVN 288 (565)
T ss_dssp EEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEE---TTSC--EEEESEEEECSCEEECCHHH--HHHTCCBCTTSSBCCC
T ss_pred EEEeccccccccccccccccccccCCCcEEEEE---cCCC--EEEcCEEEECcCCccchHHH--HhCCcccCCCCCEEEC
Confidence 999873 245566666 3676 89999999999999999865 7778999999999999
Q ss_pred CCCCcCCCCEEEeCCcCC------CC---CCcHHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEEcCCceeeecCCHHHH
Q psy14461 366 EKDQTSVGNIFAVGGIVH------GK---PNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAA 436 (535)
Q Consensus 366 ~~~~T~~~~IyA~GD~~~------~~---~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a 436 (535)
++++|+.|+|||+|||+. +. +.+++.|.+||++||+||+|...........+++.|++|++++||+||+||
T Consensus 289 ~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a 368 (565)
T 3ntd_A 289 AMMQTSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFGREERYQGTQGTAICKVFDLAVGATGKNEKQL 368 (565)
T ss_dssp TTCBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEEEEEECCHHHH
T ss_pred CCcccCCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcCCCccCCCcccceEEEEcCcEEEEecCCHHHH
Confidence 999999999999999973 22 357899999999999999997654333444557889999999999999999
Q ss_pred HHhcCCCCEEEEEEecCCcccccCCCCCcchhhhhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCch-hHH
Q psy14461 437 AKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNV-AGM 515 (535)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a-~e~ 515 (535)
++.+. ++.+.. +....++.+ . .+.+.||+||++|+++++|||+|++|++| .|+
T Consensus 369 ~~~g~--~~~~~~--~~~~~~~~~-~---------------------~~~~~~~~k~v~~~~~~~ilG~~~~g~~a~~e~ 422 (565)
T 3ntd_A 369 KQAGI--AFEKVY--VHTASHASY-Y---------------------PGAEVVSFKLLFDPVKGTIFGAQAVGKDGIDKR 422 (565)
T ss_dssp HHTTC--CCEEEE--EEEESSCTT-S---------------------TTCCEEEEEEEECTTTCBEEEEEEEESSSHHHH
T ss_pred HHcCC--CeEEEE--EecCcccCc-C---------------------CCCceEEEEEEEECCCCEEEEEEEECCccHHHH
Confidence 98733 444433 322223220 0 01468999999999999999999999998 999
Q ss_pred HHHHHHHHHCCCCHHHHcCC
Q psy14461 516 IFGYSLALRKFLTKAELDGT 535 (535)
Q Consensus 516 i~~~~~~i~~~~t~~~l~~~ 535 (535)
|+.+++||++++|++||.++
T Consensus 423 i~~~~~ai~~~~~~~~l~~~ 442 (565)
T 3ntd_A 423 IDVMAVAQRAGMTVEQLQHL 442 (565)
T ss_dssp HHHHHHHHHTTCBHHHHTTC
T ss_pred HHHHHHHHHcCCCHHHHhhh
Confidence 99999999999999999874
No 37
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=9.9e-53 Score=446.39 Aligned_cols=384 Identities=15% Similarity=0.067 Sum_probs=304.9
Q ss_pred EEEeeCCccHHHHHHHHHhhC--CCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHH
Q psy14461 90 YLDRIGDEGILLEEELKRQTN--QRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRF 167 (535)
Q Consensus 90 ~v~iiG~G~aG~~~al~~~~~--~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (535)
+++|||+|++|+.+|..+... +.+|+|||+++.++|.+++++.+ +.+... ..++.++.
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~---~~g~~~-----------~~~~~~~~------ 61 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALY---LGKEIK-----------NNDPRGLF------ 61 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHH---HTTCBG-----------GGCGGGGB------
T ss_pred eEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhh---hcCCcc-----------cCCHHHhh------
Confidence 689999999999999877665 89999999999888877776654 222100 01121111
Q ss_pred HHHHHHHHHHHHHhcCcEEEEeE-EEEe--cCCEEEEc------eeEEEcceEEEeeCceecC-CCCC---Cceech---
Q psy14461 168 CIRAKNDSMRELKALGIDIVRTA-AAFT--NPHTIKLS------NRSVTGFNFLLAVERRCLP-EPRN---SALISA--- 231 (535)
Q Consensus 168 ~~~~~~~~~~~~~~~gV~~~~g~-~~~~--~~~~v~~~------~~~~~~d~lViATGs~p~~-~i~G---~~v~~~--- 231 (535)
......++..||+++.+. +..+ +.+++.+. +.++.||+||||||++|.. ++|| +++++.
T Consensus 62 -----~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~~p~i~g~~~~~v~~~~~~ 136 (452)
T 2cdu_A 62 -----YSSPEELSNLGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPTVPPIPGIDSSRVYLCKNY 136 (452)
T ss_dssp -----SCCHHHHHHTTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTTSTTEEECSSH
T ss_pred -----hcCHHHHHHcCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcCCCCCCCCCCCCEEEeCcH
Confidence 111244566799997775 5544 36778774 3579999999999999998 8998 345543
Q ss_pred ---hhHHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCc-cCcHHHHHHHHHhhhcCCeEE-cceEEEE
Q psy14461 232 ---DDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLK-HFDQEMVRILLSSLTKAGVSI-QCCVIEK 305 (535)
Q Consensus 232 ---~~~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~-~~~~~~~~~~~~~l~~~gV~i-~~~~v~~ 305 (535)
.+++.....+++++|||+|++|+|+|..|+++|.+||++++ +++++ .+++++.+.+.+.+++.||++ ++++|++
T Consensus 137 ~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 216 (452)
T 2cdu_A 137 NDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAA 216 (452)
T ss_dssp HHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEESSCEEE
T ss_pred HHHHHHHHHhccCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhHHHHHHHHHHHCCCEEEcCCeeEE
Confidence 34444455689999999999999999999999999999999 89888 799999999999999999999 9999999
Q ss_pred EEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCCC
Q psy14461 306 VISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGK 385 (535)
Q Consensus 306 i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~ 385 (535)
++.. ++++.... .+|+ ++++|.|++|+|++||++++ +.. ++++++|+|.||+++||+.|+|||+|||+ +.
T Consensus 217 i~~~-~~~v~~v~---~~g~--~i~~D~vv~a~G~~p~~~ll--~~~-l~~~~~G~i~Vd~~~~t~~~~IyA~GD~~-~~ 286 (452)
T 2cdu_A 217 FEEV-DDEIITKT---LDGK--EIKSDIAILCIGFRPNTELL--KGK-VAMLDNGAIITDEYMHSSNRDIFAAGDSA-AV 286 (452)
T ss_dssp EEEE-TTEEEEEE---TTSC--EEEESEEEECCCEEECCGGG--TTT-SCBCTTSCBCCCTTSBCSSTTEEECSTTB-CE
T ss_pred EEcC-CCeEEEEE---eCCC--EEECCEEEECcCCCCCHHHH--HHh-hhcCCCCCEEECCCcCcCCCCEEEcceEE-Ee
Confidence 9864 35443222 2666 79999999999999999875 666 88888999999999999999999999999 42
Q ss_pred ----------CCcHHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCc
Q psy14461 386 ----------PNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTF 455 (535)
Q Consensus 386 ----------~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~ 455 (535)
+++++.|.+||++||+||++.......+...|++.|++|+++++|+++++|++.+. ++.+. .+...
T Consensus 287 ~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~--~~~~~--~~~~~ 362 (452)
T 2cdu_A 287 HYNPTNSNAYIPLATNAVRQGRLVGLNLTEDKVKDMGTQSSSGLKLYGRTYVSTGINTALAKANNL--KVSEV--IIADN 362 (452)
T ss_dssp EETTTTEEECCCCHHHHHHHHHHHHHTSSSCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTC--CCEEE--EEEEE
T ss_pred ccccCCCeeecchHHHHHHHHHHHHHHhCCCCCcCCCccceEEEEECCeeeEeecCCHHHHHHcCC--ceEEE--EEecC
Confidence 46899999999999999998654444555678899999999999999999998732 45443 23332
Q ss_pred ccccCCCCCcchhhhhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcC-chhHHHHHHHHHHHCCCCHHHHcC
Q psy14461 456 DNLLDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQ-NVAGMIFGYSLALRKFLTKAELDG 534 (535)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~-~a~e~i~~~~~~i~~~~t~~~l~~ 534 (535)
.+..+.. +.+.+|+|+++++++++|||+|++|+ ++.|+|+.++++|++++|++||.+
T Consensus 363 ~~~~~~~----------------------~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~i~~~~~ai~~~~~~~~l~~ 420 (452)
T 2cdu_A 363 YRPEFML----------------------STDEVLMSLVYDPKTRVILGGALSSMHDVSQSANVLSVCIQNKNTIDDLAM 420 (452)
T ss_dssp SSCTTBS----------------------CCCEEEEEEEECTTTCBEEEEEEEESSCCHHHHHHHHHHHHTTCBHHHHHH
T ss_pred CccccCC----------------------CCceEEEEEEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhh
Confidence 2221000 13579999999999999999999999 899999999999999999999874
No 38
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=6.8e-52 Score=439.34 Aligned_cols=381 Identities=17% Similarity=0.154 Sum_probs=301.2
Q ss_pred EEEeeCCccHHHHHHHHHhhC--CCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHH
Q psy14461 90 YLDRIGDEGILLEEELKRQTN--QRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRF 167 (535)
Q Consensus 90 ~v~iiG~G~aG~~~al~~~~~--~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (535)
+++|||+|++|+.+|..+... +.+|+|||+++.++|.+++++.+ +.+.. .++.++.
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~---~~~~~-------------~~~~~~~------ 59 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLY---LEGKV-------------KDVNSVR------ 59 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHH---HTTSS-------------CCGGGSB------
T ss_pred eEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhh---hcCcc-------------CCHHHhh------
Confidence 689999999999999877655 89999999999888877776654 22210 0111111
Q ss_pred HHHHHHHHHHHHHhcCcEEEEeEEE-Ee--cCCEEEEce------eEEEcceEEEeeCceecC-CCCC---Cceech---
Q psy14461 168 CIRAKNDSMRELKALGIDIVRTAAA-FT--NPHTIKLSN------RSVTGFNFLLAVERRCLP-EPRN---SALISA--- 231 (535)
Q Consensus 168 ~~~~~~~~~~~~~~~gV~~~~g~~~-~~--~~~~v~~~~------~~~~~d~lViATGs~p~~-~i~G---~~v~~~--- 231 (535)
......+++.||+++.+... .+ +.++|.+.+ .++.||+||||||++|.. ++|| +++++.
T Consensus 60 -----~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~ 134 (447)
T 1nhp_A 60 -----YMTGEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKDLDNIYLMRGR 134 (447)
T ss_dssp -----SCCHHHHHHTTCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCSTTTTSBSEECCCHH
T ss_pred -----cCCHHHHHHCCCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcCCCCCCCCCCCCeEEECCH
Confidence 11124456679999776543 33 567787742 258999999999999998 8998 346654
Q ss_pred hhHHhcc---C--CCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCc-cCcHHHHHHHHHhhhcCCeEE-cceEE
Q psy14461 232 DDLFRLG---A--WPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLK-HFDQEMVRILLSSLTKAGVSI-QCCVI 303 (535)
Q Consensus 232 ~~~~~~~---~--~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~-~~~~~~~~~~~~~l~~~gV~i-~~~~v 303 (535)
+++..+. . .+++++|||+|++|+|+|..|+++|.+|+++++ +.+++ .+++++.+.+.+.+++.||++ +++.+
T Consensus 135 ~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~i~~~~~v 214 (447)
T 1nhp_A 135 QWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGETV 214 (447)
T ss_dssp HHHHHHHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEESCCE
T ss_pred HHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccccCCHHHHHHHHHHHHhCCCEEEcCCEE
Confidence 4443332 2 689999999999999999999999999999999 88888 689999999999999999999 99999
Q ss_pred EEEEEeCCCcE-EEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcC
Q psy14461 304 EKVISSFDGMK-GVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIV 382 (535)
Q Consensus 304 ~~i~~~~~~~~-~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~ 382 (535)
++++.+ +.+ .+.+ +|+ ++++|.|++|+|++|+++++ +.. ++++++|+|.||+++||+.|+|||+|||+
T Consensus 215 ~~i~~~--~~v~~v~~----~~~--~i~~d~vi~a~G~~p~~~~~--~~~-~~~~~~G~i~Vd~~~~t~~~~Iya~GD~~ 283 (447)
T 1nhp_A 215 ERYEGD--GRVQKVVT----DKN--AYDADLVVVAVGVRPNTAWL--KGT-LELHPNGLIKTDEYMRTSEPDVFAVGDAT 283 (447)
T ss_dssp EEEECS--SBCCEEEE----SSC--EEECSEEEECSCEEESCGGG--TTT-SCBCTTSCBCCCTTCBCSSTTEEECGGGS
T ss_pred EEEEcc--CcEEEEEE----CCC--EEECCEEEECcCCCCChHHH--Hhh-hhhcCCCcEEECccccCCCCCEEEeeeEE
Confidence 999864 333 4554 455 79999999999999999876 565 77888899999999999999999999999
Q ss_pred C------C---CCCcHHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecC
Q psy14461 383 H------G---KPNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYP 453 (535)
Q Consensus 383 ~------~---~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~ 453 (535)
. + .+++++.|.+||++||+||++......++..+|++.|++|+++++|+++++|++.+. ++.+. .+.
T Consensus 284 ~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~--~~~~~--~~~ 359 (447)
T 1nhp_A 284 LIKYNPADTEVNIALATNARKQGRFAVKNLEEPVKPFPGVQGSSGLAVFDYKFASTGINEVMAQKLGK--ETKAV--TVV 359 (447)
T ss_dssp CEEEGGGTEEECCCCHHHHHHHHHHHHHTSSSCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHHTC--CCEEE--EEE
T ss_pred EeeccCCCCceechhHHHHHHHHHHHHHhhcCCCCCCCCccccEEEEECCeeeEEecCCHHHHHHcCC--ceEEE--EEE
Confidence 3 0 246899999999999999998654444556789999999999999999999998733 44443 232
Q ss_pred CcccccCCCCCcchhhhhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCc-hhHHHHHHHHHHHCCCCHHHH
Q psy14461 454 TFDNLLDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQN-VAGMIFGYSLALRKFLTKAEL 532 (535)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~-a~e~i~~~~~~i~~~~t~~~l 532 (535)
...+.. ... +++.+|+|+++++++++|||+|++|++ |.|+|+.++++|++++|++||
T Consensus 360 ~~~~~~-~~~---------------------~~~~~~~k~~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~~~l 417 (447)
T 1nhp_A 360 EDYLMD-FNP---------------------DKQKAWFKLVYDPETTQILGAQLMSKADLTANINAISLAIQAKMTIEDL 417 (447)
T ss_dssp EESSCT-TCT---------------------TCCEEEEEEEECTTTCBEEEEEEEESSCCTTHHHHHHHHHHTTCBHHHH
T ss_pred cCCccc-cCC---------------------CCceEEEEEEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHH
Confidence 222221 000 146799999999989999999999998 999999999999999999999
Q ss_pred cC
Q psy14461 533 DG 534 (535)
Q Consensus 533 ~~ 534 (535)
.+
T Consensus 418 ~~ 419 (447)
T 1nhp_A 418 AY 419 (447)
T ss_dssp HT
T ss_pred hh
Confidence 86
No 39
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=8.8e-52 Score=442.19 Aligned_cols=383 Identities=16% Similarity=0.158 Sum_probs=305.2
Q ss_pred EEEEeeCCccHHHHHHHHHhhC--CCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTN--QRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKR 166 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~--~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (535)
++|+|||+|++|+.+|..+... +.+|+|||+++..+|.+++++.+ +.+. ..++.++..+.
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~---~~~~-------------~~~~~~l~~~~-- 98 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYV---ISGA-------------IASTEKLIARN-- 98 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHH---HTTS-------------SSCGGGGBSSC--
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchh---hcCC-------------cCCHHHhhhcC--
Confidence 5789999999999999877653 78999999999888877776654 2221 11222221111
Q ss_pred HHHHHHHHHHHHH-HhcCcEEEEe-EEEEe--cCCEEEEce----e--EEEcceEEEeeCceecC-CCCC---Ccee---
Q psy14461 167 FCIRAKNDSMREL-KALGIDIVRT-AAAFT--NPHTIKLSN----R--SVTGFNFLLAVERRCLP-EPRN---SALI--- 229 (535)
Q Consensus 167 ~~~~~~~~~~~~~-~~~gV~~~~g-~~~~~--~~~~v~~~~----~--~~~~d~lViATGs~p~~-~i~G---~~v~--- 229 (535)
.+.+ +..||+++.+ .+..+ +.+++.+.+ . ++.||+||||||++|+. ++|| ++++
T Consensus 99 ---------~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~ 169 (480)
T 3cgb_A 99 ---------VKTFRDKYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMPEWEGRDLQGVHLLK 169 (480)
T ss_dssp ---------HHHHHHTTCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCBTTTSBTEECCS
T ss_pred ---------HHHHHhhcCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCcccCCCCCCccCCCEEEeC
Confidence 1223 4459999875 44444 356777752 2 79999999999999998 8988 3444
Q ss_pred chhhHHhccC-----CCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceE
Q psy14461 230 SADDLFRLGA-----WPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCV 302 (535)
Q Consensus 230 ~~~~~~~~~~-----~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~ 302 (535)
+.++++.+.+ .+++|+|||+|++|+|+|..|++.|.+|+++++ +.+++.+++++.+.+.+.+++.||++ +++.
T Consensus 170 ~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~ 249 (480)
T 3cgb_A 170 TIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTIYDGDMAEYIYKEADKHHIEILTNEN 249 (480)
T ss_dssp SHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSSSCHHHHHHHHHHHHHTTCEEECSCC
T ss_pred CHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhcCCHHHHHHHHHHHHHcCcEEEcCCE
Confidence 4566665543 689999999999999999999999999999999 89999999999999999999999999 9999
Q ss_pred EEEEEEeCCCcE-EEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCc
Q psy14461 303 IEKVISSFDGMK-GVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGI 381 (535)
Q Consensus 303 v~~i~~~~~~~~-~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~ 381 (535)
+++++.+ +.+ .+.+ ++. ++++|.|++|+|++|+++++ +.+|++++++|+|.||+++||+.|+|||+|||
T Consensus 250 v~~i~~~--~~v~~v~~----~~~--~i~~D~vi~a~G~~p~~~~l--~~~g~~~~~~G~I~Vd~~~~ts~p~IyA~GD~ 319 (480)
T 3cgb_A 250 VKAFKGN--ERVEAVET----DKG--TYKADLVLVSVGVKPNTDFL--EGTNIRTNHKGAIEVNAYMQTNVQDVYAAGDC 319 (480)
T ss_dssp EEEEEES--SBEEEEEE----TTE--EEECSEEEECSCEEESCGGG--TTSCCCBCTTSCBCCCTTSBCSSTTEEECGGG
T ss_pred EEEEEcC--CcEEEEEE----CCC--EEEcCEEEECcCCCcChHHH--HhCCcccCCCCCEEECCCccCCCCCEEEeeeE
Confidence 9999864 333 3444 344 79999999999999999876 77889998899999999999999999999999
Q ss_pred CC------CC---CCcHHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEec
Q psy14461 382 VH------GK---PNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSY 452 (535)
Q Consensus 382 ~~------~~---~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~ 452 (535)
+. +. +++++.|.+||++||+||++......++..+|++.|++|+++++|+++++|++.+. ++.+.....
T Consensus 320 ~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~--~~~~~~~~~ 397 (480)
T 3cgb_A 320 ATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLDKRRAFKGTLGTGIIKFMNLTLARTGLNEKEAKGLHI--PYKTVKVDS 397 (480)
T ss_dssp BCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTC--CEEEEEEEE
T ss_pred EEecCCCCCcceecchHHHHHHHHHHHHHHhcCCCccCCCccceeEEEECCcEEEEeCCCHHHHHHcCC--ceEEEEEec
Confidence 84 11 25789999999999999998654444566789999999999999999999998743 565544333
Q ss_pred CCcccccCCCCCcchhhhhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCc-hhHHHHHHHHHHHCCCCHHH
Q psy14461 453 PTFDNLLDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQN-VAGMIFGYSLALRKFLTKAE 531 (535)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~-a~e~i~~~~~~i~~~~t~~~ 531 (535)
....... + +.+.+|+|+++|+++++|||+|++|++ |.|+|+.++++|++++|++|
T Consensus 398 ~~~~~~~-~-----------------------~~~~~~~kl~~~~~~~~ilG~~~vg~~~a~e~i~~~~~ai~~~~~~~~ 453 (480)
T 3cgb_A 398 TNMAGYY-P-----------------------NAKPLYLKLLYRSDTKQLLGGQVIGEEGVDKRIDVIAMALFNKMSIHD 453 (480)
T ss_dssp ESSCTTS-T-----------------------TCCEEEEEEEEETTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGG
T ss_pred CCccccc-C-----------------------CCceEEEEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHHcCCCHHH
Confidence 2111111 1 146799999999999999999999998 99999999999999999999
Q ss_pred HcC
Q psy14461 532 LDG 534 (535)
Q Consensus 532 l~~ 534 (535)
|.+
T Consensus 454 l~~ 456 (480)
T 3cgb_A 454 LED 456 (480)
T ss_dssp GGG
T ss_pred Hhh
Confidence 976
No 40
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=7e-52 Score=444.09 Aligned_cols=382 Identities=15% Similarity=0.131 Sum_probs=301.1
Q ss_pred EEEEeeCCccHHHHHHHHHhhCC---CeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQ---RRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIK 165 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~---~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 165 (535)
++|+|||+|++|+.+|..+...+ .+|+|||+++.++|.+++++.+ +.+.. .++.++
T Consensus 36 ~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~---~~~~~-------------~~~~~~----- 94 (490)
T 2bc0_A 36 SKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALW---IGEQI-------------AGPEGL----- 94 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHH---HTTSS-------------SCSGGG-----
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchh---hcCcc-------------CCHHHh-----
Confidence 57899999999999998776654 8999999999887877776544 22210 001111
Q ss_pred HHHHHHHHHHHHHHHhcCcEEEEeE-EEEe--cCCEEEEc----eeEEEcceEEEeeCceecC-CCCC-C----------
Q psy14461 166 RFCIRAKNDSMRELKALGIDIVRTA-AAFT--NPHTIKLS----NRSVTGFNFLLAVERRCLP-EPRN-S---------- 226 (535)
Q Consensus 166 ~~~~~~~~~~~~~~~~~gV~~~~g~-~~~~--~~~~v~~~----~~~~~~d~lViATGs~p~~-~i~G-~---------- 226 (535)
.....+.++..||+++.+. +..+ +++++.+. +.++.||+||||||++|.. ++|| +
T Consensus 95 ------~~~~~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~~~~f~~ 168 (490)
T 2bc0_A 95 ------FYSDKEELESLGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPILPPIKGAEIKEGSLEFEA 168 (490)
T ss_dssp ------BSCCHHHHHHTTCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCEEECCCSCBTCCBCTTCTTCCB
T ss_pred ------hhcCHHHHHhCCCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcCCCCCCCcccccccccccc
Confidence 0011234556799987665 5554 36778875 3579999999999999988 8887 5
Q ss_pred ---ceec------hhhHHhcc--CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCc-cCcHHHHHHHHHhhhc
Q psy14461 227 ---ALIS------ADDLFRLG--AWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLK-HFDQEMVRILLSSLTK 293 (535)
Q Consensus 227 ---~v~~------~~~~~~~~--~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~-~~~~~~~~~~~~~l~~ 293 (535)
++++ +++++... ..+++|+|||||++|+|+|..|+++|.+||++++ +++++ .+++++.+.+.+.+++
T Consensus 169 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~ 248 (490)
T 2bc0_A 169 TLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEE 248 (490)
T ss_dssp SSTTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHT
T ss_pred ccCCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhHHHHHHHHHHHHHHHh
Confidence 2443 33444433 5689999999999999999999999999999999 88888 7999999999999999
Q ss_pred CCeEE-cceEEEEEEEeCCCcE-EEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcC
Q psy14461 294 AGVSI-QCCVIEKVISSFDGMK-GVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTS 371 (535)
Q Consensus 294 ~gV~i-~~~~v~~i~~~~~~~~-~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~ 371 (535)
.||++ +++++++++.+ +++ .+.+ +|+ ++++|.|++|+|++||++++ +.. ++++++|+|.||+++||+
T Consensus 249 ~GV~i~~~~~v~~i~~~--~~v~~v~~----~g~--~i~~D~Vi~a~G~~p~~~ll--~~~-l~~~~~G~I~Vd~~~~t~ 317 (490)
T 2bc0_A 249 HGIQLAFGETVKEVAGN--GKVEKIIT----DKN--EYDVDMVILAVGFRPNTTLG--NGK-IDLFRNGAFLVNKRQETS 317 (490)
T ss_dssp TTCEEEETCCEEEEECS--SSCCEEEE----SSC--EEECSEEEECCCEEECCGGG--TTC-SCBCTTSCBCCCTTCBCS
T ss_pred CCeEEEeCCEEEEEEcC--CcEEEEEE----CCc--EEECCEEEECCCCCcChHHH--Hhh-hccCCCCCEEECCCcccC
Confidence 99999 99999999863 333 3554 566 79999999999999999875 555 788889999999999999
Q ss_pred CCCEEEeCCcCCCC----------CCcHHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcC
Q psy14461 372 VGNIFAVGGIVHGK----------PNNASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYG 441 (535)
Q Consensus 372 ~~~IyA~GD~~~~~----------~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~ 441 (535)
.|+|||+|||+ +. +.+++.|.+||++||.||++.......+...|++.+++|+++++|+++++|++.+.
T Consensus 318 ~~~IyA~GD~~-~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~ 396 (490)
T 2bc0_A 318 IPGVYAIGDCA-TIYDNATRDTNYIALASNAVRTGIVAAHNACGTDLEGIGVQGSNGISIYGLHMVSTGLTLEKAKRLGF 396 (490)
T ss_dssp STTEEECGGGB-CEEETTTTEEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTC
T ss_pred CCCEEEeeeeE-EeccccCCceeecccHHHHHHHHHHHHHHhcCCCCCCCCcccceEEEECCcEeEEeeCCHHHHHHcCC
Confidence 99999999999 42 46899999999999999998654444555677888889999999999999998732
Q ss_pred CCCEEEEEEecCCcccccCCCCCcchhhhhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcC-chhHHHHHHH
Q psy14461 442 ADGLVIYKSSYPTFDNLLDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQ-NVAGMIFGYS 520 (535)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~-~a~e~i~~~~ 520 (535)
++.+. .+....+..+... +.+.+|+|+++++++++|||+|++|+ ++.|+|+.++
T Consensus 397 --~~~~~--~~~~~~~~~~~~~---------------------~~~~~~~kl~~~~~~~~ilG~~~~g~~~a~e~i~~~~ 451 (490)
T 2bc0_A 397 --DAAVT--EYTDNQKPEFIEH---------------------GNFPVTIKIVYDKDSRRILGAQMAAREDVSMGIHMFS 451 (490)
T ss_dssp --CEEEE--EEEEESSCTTCCS---------------------SCCEEEEEEEEETTTCBEEEEEEEESSCCTTHHHHHH
T ss_pred --ceEEE--EEecCCcccccCC---------------------CCceEEEEEEEECCCCEEEEEEEEcCcCHHHHHHHHH
Confidence 45543 3333223220000 13579999999999999999999999 8999999999
Q ss_pred HHHHCCCCHHHHcC
Q psy14461 521 LALRKFLTKAELDG 534 (535)
Q Consensus 521 ~~i~~~~t~~~l~~ 534 (535)
++|++++|++||.+
T Consensus 452 ~ai~~~~~~~~l~~ 465 (490)
T 2bc0_A 452 LAIQEGVTIEKLAL 465 (490)
T ss_dssp HHHHHTCBHHHHHH
T ss_pred HHHHcCCCHHHHhh
Confidence 99999999999974
No 41
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=5e-52 Score=455.16 Aligned_cols=385 Identities=17% Similarity=0.152 Sum_probs=303.0
Q ss_pred EEEEeeCCccHHHHHHHHHhhC--CCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTN--QRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKR 166 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~--~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (535)
.+|+|||+|++|+++|..+... +.+|+|||+++.++|.++++|++ +++... ....+
T Consensus 37 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~---~~g~~~-------------~~~~~------ 94 (588)
T 3ics_A 37 RKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYY---IGGVIT-------------ERQKL------ 94 (588)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHH---HTTSSC-------------CGGGG------
T ss_pred CCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchh---hcCcCC-------------ChHHh------
Confidence 5789999999999999876655 89999999999999988888876 333210 00000
Q ss_pred HHHHHHHHHHHHHHhcCcEEEEeE-EEEe--cCCEEEEc----e--eEEEcceEEEeeCceecC-CCCC----Cceechh
Q psy14461 167 FCIRAKNDSMRELKALGIDIVRTA-AAFT--NPHTIKLS----N--RSVTGFNFLLAVERRCLP-EPRN----SALISAD 232 (535)
Q Consensus 167 ~~~~~~~~~~~~~~~~gV~~~~g~-~~~~--~~~~v~~~----~--~~~~~d~lViATGs~p~~-~i~G----~~v~~~~ 232 (535)
+........+..++++..+. +..+ +.+++.+. + .++.||+||||||++|.. ++|| ..+++..
T Consensus 95 ----~~~~~~~~~~~~gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~v~~~~ 170 (588)
T 3ics_A 95 ----LVQTVERMSKRFNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIVPSIPGIEEAKALFTLR 170 (588)
T ss_dssp ----BSSCHHHHHHHTTCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTTTCTTEEECS
T ss_pred ----hccCHHHHHHhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCCCCCCCCCcccCCCeEEeC
Confidence 00111234456789986543 4333 45677764 2 378999999999999998 8888 3455554
Q ss_pred hHHhc--------cCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceE
Q psy14461 233 DLFRL--------GAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCV 302 (535)
Q Consensus 233 ~~~~~--------~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~ 302 (535)
++... ...+++++|||+|++|+|+|..|++.|.+|+++++ +.+++.+++++.+.+.+.+++.||++ +++.
T Consensus 171 ~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~ 250 (588)
T 3ics_A 171 NVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPPIDYEMAAYVHEHMKNHDVELVFEDG 250 (588)
T ss_dssp SHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCC
T ss_pred CHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccccCCHHHHHHHHHHHHHcCCEEEECCe
Confidence 43322 24689999999999999999999999999999999 99999999999999999999999999 9999
Q ss_pred EEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcC
Q psy14461 303 IEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIV 382 (535)
Q Consensus 303 v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~ 382 (535)
|++++.+ ++ .|++. +|+ ++++|.|++|+|++|+++++ +.+|++++++|+|.||++++|+.|+|||+|||+
T Consensus 251 v~~i~~~-~~--~v~~~---~g~--~i~~D~Vi~a~G~~p~~~~l--~~~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~ 320 (588)
T 3ics_A 251 VDALEEN-GA--VVRLK---SGS--VIQTDMLILAIGVQPESSLA--KGAGLALGVRGTIKVNEKFQTSDPHIYAIGDAI 320 (588)
T ss_dssp EEEEEGG-GT--EEEET---TSC--EEECSEEEECSCEEECCHHH--HHTTCCBCGGGCBCCCTTSBCSSTTEEECGGGB
T ss_pred EEEEecC-CC--EEEEC---CCC--EEEcCEEEEccCCCCChHHH--HhcCceEcCCCCEEECCccccCCCCEEEeeeee
Confidence 9999864 23 46663 676 89999999999999999875 788999999999999999999999999999998
Q ss_pred C------C---CCCcHHHHHHHHHHHHHHHhC-CCCCCCCCCCCcEEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEec
Q psy14461 383 H------G---KPNNASMAAISARLIIERLYG-MQDQLMDYSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSY 452 (535)
Q Consensus 383 ~------~---~~~~~~~A~~~g~~aa~~i~g-~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~ 452 (535)
. + .+++++.|.+||++||+||+| ...........++..|++|++++||+||+||++++. ++.+.....
T Consensus 321 ~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~a~vGlte~~a~~~g~--~~~~~~~~~ 398 (588)
T 3ics_A 321 EVKDFVTETETMIPLAWPANRQGRMLADIIHGHTDSLYKGTLGTSVAKVFDLTVATTGLNEKILKRLNI--PYEVVHVQA 398 (588)
T ss_dssp CEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCSSCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTC--CCEEEEEEE
T ss_pred ecccccCCcccccccHHHHHHHHHHHHHHhcCCCccccCCcccceEEEECCeEEEEecCCHHHHHHcCC--CeEEEEEec
Confidence 3 2 246889999999999999998 543322222334556899999999999999998843 555544332
Q ss_pred CCcccccCCCCCcchhhhhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCc-hhHHHHHHHHHHHCCCCHHH
Q psy14461 453 PTFDNLLDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQN-VAGMIFGYSLALRKFLTKAE 531 (535)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~-a~e~i~~~~~~i~~~~t~~~ 531 (535)
..+.. ...+++.||+||++|++|++|||+|++|++ |.|+|+.+++||++++|++|
T Consensus 399 --~~~~~----------------------~~~~~~~~~~k~i~~~~~~~ilG~~~~g~~~~~e~i~~~~~ai~~~~t~~~ 454 (588)
T 3ics_A 399 --NSHAG----------------------YYPNATPVLIKLIFNKDSGKIYGAQTLGRDGVDKRMDVIATAIKANLTVLD 454 (588)
T ss_dssp --ESSCT----------------------TSTTCCEEEEEEEECTTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBTTT
T ss_pred --CCccc----------------------cCCCCceEEEEEEEECCCCeEEEEEEEcCCcHHHHHHHHHHHHHcCCCHHH
Confidence 12211 011257899999999999999999999985 89999999999999999999
Q ss_pred HcCC
Q psy14461 532 LDGT 535 (535)
Q Consensus 532 l~~~ 535 (535)
|.++
T Consensus 455 l~~~ 458 (588)
T 3ics_A 455 LPDL 458 (588)
T ss_dssp GGGC
T ss_pred hhhh
Confidence 9764
No 42
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=1.5e-43 Score=367.96 Aligned_cols=351 Identities=16% Similarity=0.118 Sum_probs=272.4
Q ss_pred EEEEeeCCccHHHHHHHHHhhCC--CeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQ--RRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKR 166 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~--~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (535)
++++|||+|++|+.+|..+...+ .+|+|+|++....|....++.. +.. .....++.
T Consensus 5 ~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~~l~~~---~~~--------------~~~~~~~~----- 62 (384)
T 2v3a_A 5 APLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTG---FSK--------------NKDADGLA----- 62 (384)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGGGGGGT---TTT--------------TCCHHHHE-----
T ss_pred CcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcccccHH---HhC--------------CCCHHHhh-----
Confidence 46899999999999998776665 5799999987554443333222 111 01111111
Q ss_pred HHHHHHHHHHHHHHhcCcEEEEeE-EEEec--CCEEEEceeEEEcceEEEeeCceecC-CCCC---CceechhhHHhcc-
Q psy14461 167 FCIRAKNDSMRELKALGIDIVRTA-AAFTN--PHTIKLSNRSVTGFNFLLAVERRCLP-EPRN---SALISADDLFRLG- 238 (535)
Q Consensus 167 ~~~~~~~~~~~~~~~~gV~~~~g~-~~~~~--~~~v~~~~~~~~~d~lViATGs~p~~-~i~G---~~v~~~~~~~~~~- 238 (535)
.......++..+++++.+. +..++ .++|.+++.++.||+||||||++|.. ++|| +.+++..++..+.
T Consensus 63 -----~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~ 137 (384)
T 2v3a_A 63 -----MAEPGAMAEQLNARILTHTRVTGIDPGHQRIWIGEEEVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYAR 137 (384)
T ss_dssp -----EECHHHHHHHTTCEEECSCCCCEEEGGGTEEEETTEEEECSEEEECCCEEECCCCCBSTTTTCEEECSSHHHHHH
T ss_pred -----ccCHHHHHHhCCcEEEeCCEEEEEECCCCEEEECCcEEECCEEEEeCCCCcCCCCCCCcCcCCEEEECCHHHHHH
Confidence 1112345567899988764 45443 47888877789999999999999998 8988 4577766655432
Q ss_pred -----CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCcc-CcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeC
Q psy14461 239 -----AWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKH-FDQEMVRILLSSLTKAGVSI-QCCVIEKVISSF 310 (535)
Q Consensus 239 -----~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~-~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~ 310 (535)
..+++++|||+|++|+|+|..|+++|.+|+++++ +.+++. +++++.+.+.+.+++.||++ +++++++++.+
T Consensus 138 ~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~- 216 (384)
T 2v3a_A 138 FRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKA- 216 (384)
T ss_dssp HHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEE-
T ss_pred HHHhhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEec-
Confidence 2389999999999999999999999999999999 888876 58999999999999999999 99999999876
Q ss_pred CCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCC-CC--CC
Q psy14461 311 DGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVH-GK--PN 387 (535)
Q Consensus 311 ~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~-~~--~~ 387 (535)
++.+.|++. +|+ ++++|.|++|+|++|+++++ +.+|++++ +| |.||+++||+.|+|||+|||+. .+ ..
T Consensus 217 ~~~~~v~~~---~g~--~i~~d~vv~a~G~~p~~~l~--~~~g~~~~-~g-i~vd~~~~t~~~~IyA~GD~~~~~~~~~~ 287 (384)
T 2v3a_A 217 GEGLEAHLS---DGE--VIPCDLVVSAVGLRPRTELA--FAAGLAVN-RG-IVVDRSLRTSHANIYALGDCAEVDGLNLL 287 (384)
T ss_dssp TTEEEEEET---TSC--EEEESEEEECSCEEECCHHH--HHTTCCBS-SS-EEECTTCBCSSTTEEECGGGEEETTBCCC
T ss_pred CCEEEEEEC---CCC--EEECCEEEECcCCCcCHHHH--HHCCCCCC-CC-EEECCCCCCCCCCEEEeeeeeeECCCCcc
Confidence 455667763 676 79999999999999999864 77888887 68 9999999999999999999983 12 23
Q ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCCCCCcEEEEcC-CceeeecCCHHHHHHhcCCCCEEEEEEecCCcccccCCCCCcc
Q psy14461 388 NASMAAISARLIIERLYGMQDQLMDYSFLPVVVRGD-VEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPEN 466 (535)
Q Consensus 388 ~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~-~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (535)
.++.|.+||++||+||+|.. .++++..+|+++|+. +++.++|+++.+ . ..... .
T Consensus 288 ~~~~a~~~g~~~a~~i~g~~-~~~~~~~~p~~~~~~~~~~~~~g~~~~~---~----~~~~~----------~------- 342 (384)
T 2v3a_A 288 YVMPLMACARALAQTLAGNP-SQVAYGPMPVTVKTPACPLVVSPPPRGM---D----GQWLV----------E------- 342 (384)
T ss_dssp SHHHHHHHHHHHHHHHTTCC-CCCCCCCCCEEECCTTSCEEEECCCTTC---C----CEEEE----------E-------
T ss_pred hHHHHHHHHHHHHHHhcCCC-ccCCCCCcceEEEECCeeEEEecCCCCC---C----ceEEE----------E-------
Confidence 57779999999999999865 567888899999986 589999986531 0 11000 0
Q ss_pred hhhhhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCchhHHHHHHH
Q psy14461 467 FVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYS 520 (535)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~ 520 (535)
+++.||.|++++ ++++|+|+|++|++|+|+++.+.
T Consensus 343 ------------------~~~~g~~~~~~~-~~~~i~G~~~~g~~a~e~~~~~~ 377 (384)
T 2v3a_A 343 ------------------GSGTDLKVLCRD-TAGRVIGYALTGAAVNEKLALNK 377 (384)
T ss_dssp ------------------EETTEEEEEEEC-TTSCEEEEEEEGGGGGGHHHHHT
T ss_pred ------------------ecCCcEEEEEEc-cCCEEEEEEEECcchHHHHHHHH
Confidence 024689999988 67999999999999999988754
No 43
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=4.4e-45 Score=376.91 Aligned_cols=326 Identities=17% Similarity=0.217 Sum_probs=252.2
Q ss_pred EEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHHHH
Q psy14461 90 YLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRFCI 169 (535)
Q Consensus 90 ~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 169 (535)
+++|||+|++|+.+|..+...+ +|+|||+++...|.++.++.+ +.+ ..++.++..+
T Consensus 10 ~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~---~~g--------------~~~~~~~~~~------ 65 (367)
T 1xhc_A 10 KVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHY---IAG--------------FIPRNRLFPY------ 65 (367)
T ss_dssp EEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHH---HTT--------------SSCGGGGCSS------
T ss_pred cEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHH---HhC--------------CCCHHHhccC------
Confidence 6799999999999999887777 999999999776655544433 222 1122222111
Q ss_pred HHHHHHHHHHHhcCcEEEEeE-EEEecC--CEEEEceeEEEcceEEEeeCceecC-CCCC-Cceec---hhhHHhccC--
Q psy14461 170 RAKNDSMRELKALGIDIVRTA-AAFTNP--HTIKLSNRSVTGFNFLLAVERRCLP-EPRN-SALIS---ADDLFRLGA-- 239 (535)
Q Consensus 170 ~~~~~~~~~~~~~gV~~~~g~-~~~~~~--~~v~~~~~~~~~d~lViATGs~p~~-~i~G-~~v~~---~~~~~~~~~-- 239 (535)
..+.+++.||+++.++ +..++. ++|..++.++.||+||||||++|+. ++|| +++++ .+++..+..
T Consensus 66 -----~~~~~~~~~v~~~~g~~v~~id~~~~~V~~~g~~~~~d~lViATGs~p~~p~i~G~~~v~~~~~~~~~~~l~~~~ 140 (367)
T 1xhc_A 66 -----SLDWYRKRGIEIRLAEEAKLIDRGRKVVITEKGEVPYDTLVLATGARAREPQIKGKEYLLTLRTIFDADRIKESI 140 (367)
T ss_dssp -----CHHHHHHHTEEEECSCCEEEEETTTTEEEESSCEEECSEEEECCCEEECCCCSBTGGGEECCCSHHHHHHHHHHH
T ss_pred -----CHHHHHhCCcEEEECCEEEEEECCCCEEEECCcEEECCEEEECCCCCCCCCCCCCcCCEEEEcCHHHHHHHHHHh
Confidence 1244566799999884 666653 4666344789999999999999999 8998 55554 455555432
Q ss_pred -CCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEE
Q psy14461 240 -WPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGV 316 (535)
Q Consensus 240 -~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v 316 (535)
.+++++|||||++|+|+|..|+++|.+||++++ +++++ +++++.+.+.+.++++||++ +++++++++. + .|
T Consensus 141 ~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~---~--~v 214 (367)
T 1xhc_A 141 ENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG-LDEELSNMIKDMLEETGVKFFLNSELLEANE---E--GV 214 (367)
T ss_dssp HHHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT-CCHHHHHHHHHHHHHTTEEEECSCCEEEECS---S--EE
T ss_pred hcCCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc-CCHHHHHHHHHHHHHCCCEEEcCCEEEEEEe---e--EE
Confidence 358999999999999999999999999999999 89999 99999999999999999999 9999999862 2 35
Q ss_pred EEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCC--CC-CCcHHHHH
Q psy14461 317 RGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVH--GK-PNNASMAA 393 (535)
Q Consensus 317 ~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~--~~-~~~~~~A~ 393 (535)
+++ +|+ +++|.|++|+|++||++++ +.++++.+ +| |.||+++||+.|+|||+|||+. +. +++++.|.
T Consensus 215 ~~~---~g~---i~~D~vi~a~G~~p~~~ll--~~~gl~~~-~g-i~Vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~ 284 (367)
T 1xhc_A 215 LTN---SGF---IEGKVKICAIGIVPNVDLA--RRSGIHTG-RG-ILIDDNFRTSAKDVYAIGDCAEYSGIIAGTAKAAM 284 (367)
T ss_dssp EET---TEE---EECSCEEEECCEEECCHHH--HHTTCCBS-SS-EECCTTSBCSSTTEEECGGGEEBTTBCCCSHHHHH
T ss_pred EEC---CCE---EEcCEEEECcCCCcCHHHH--HhCCCCCC-CC-EEECCCcccCCCCEEEeEeeeecCCCCccHHHHHH
Confidence 663 553 8999999999999999865 77888876 55 9999999999999999999973 22 46899999
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCc--EEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCcccccCCCCCcchhhhh
Q psy14461 394 ISARLIIERLYGMQDQLMDYSFLP--VVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLV 471 (535)
Q Consensus 394 ~~g~~aa~~i~g~~~~~~~~~~~p--~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (535)
+||++||+||++.. .++++ .+| ++.|++|+++++|++++++. ++
T Consensus 285 ~qg~~aa~~i~g~~-~~~~~-~~~~~~~~~~~~~~~~vG~~~~~~~--------~~------------------------ 330 (367)
T 1xhc_A 285 EQARVLADILKGEP-RRYNF-KFRSTVFKFGKLQIAIIGNTKGEGK--------WI------------------------ 330 (367)
T ss_dssp HHHHHHHHHHTTCC-CCCCS-SCCEEEEEETTEEEEEEECCSSCEE--------EE------------------------
T ss_pred HHHHHHHHHhcCCC-ccCCC-CCCceEEEECCceEEEECCCCCCCc--------cc------------------------
Confidence 99999999999864 33333 234 35899999999999987321 11
Q ss_pred hccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCch
Q psy14461 472 CLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNV 512 (535)
Q Consensus 472 ~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a 512 (535)
.+|+|++++ +++|||+|++|+.+
T Consensus 331 ----------------~~~~k~~~~--~~~ilG~~~~g~~~ 353 (367)
T 1xhc_A 331 ----------------EDNTKVFYE--NGKIIGAVVFNDIR 353 (367)
T ss_dssp ----------------ETTEEEEC-------CEEEEESCHH
T ss_pred ----------------ceEEEEEEE--CCEEEEEEEECChH
Confidence 258999997 48999999999864
No 44
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=2.3e-44 Score=373.61 Aligned_cols=344 Identities=14% Similarity=0.215 Sum_probs=272.4
Q ss_pred EEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHHHH
Q psy14461 90 YLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRFCI 169 (535)
Q Consensus 90 ~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 169 (535)
+|+|||+|++|+.+|..+...+.+|+|||++++++|.++.++.+ +.+. .+..++.
T Consensus 11 ~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~---l~g~--------------~~~~~l~-------- 65 (385)
T 3klj_A 11 KILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEI---IAKN--------------KSIDDIL-------- 65 (385)
T ss_dssp SEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHH---HHSC--------------CCGGGTB--------
T ss_pred CEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHH---HcCC--------------CCHHHcc--------
Confidence 46999999999999998877889999999999998887777655 3321 0111111
Q ss_pred HHHHHHHHHHHhcCcEEEEe-EEEEec--CCEEEEce-eEEEcceEEEeeCceecC-CCCC-Ccee---chhhHHhccC-
Q psy14461 170 RAKNDSMRELKALGIDIVRT-AAAFTN--PHTIKLSN-RSVTGFNFLLAVERRCLP-EPRN-SALI---SADDLFRLGA- 239 (535)
Q Consensus 170 ~~~~~~~~~~~~~gV~~~~g-~~~~~~--~~~v~~~~-~~~~~d~lViATGs~p~~-~i~G-~~v~---~~~~~~~~~~- 239 (535)
....+++++.+|+++.+ ++..++ .++|++.+ .++.||+||||||++|+. ++|| ++++ +.+++..+..
T Consensus 66 ---~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~~p~i~G~~~v~~~~~~~d~~~l~~~ 142 (385)
T 3klj_A 66 ---IKKNDWYEKNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANKIKVPHADEIFSLYSYDDALKIKDE 142 (385)
T ss_dssp ---SSCHHHHHHTTCEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCCCTTCSCEECCSSHHHHHHHHHH
T ss_pred ---CCCHHHHHHCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEecCCCcCCCCCCCCCCeEEeCCHHHHHHHHHH
Confidence 11224566789999987 465544 56888865 689999999999999999 9999 5554 4566655542
Q ss_pred --CCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCcc-CcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcE
Q psy14461 240 --WPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKH-FDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMK 314 (535)
Q Consensus 240 --~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~-~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~ 314 (535)
.+++|+|||||++|+|+|..|+++|.+||++++ +++++. +++++.+.+.+.+++.||++ +++.++++
T Consensus 143 l~~~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i-------- 214 (385)
T 3klj_A 143 CKNKGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEM-------- 214 (385)
T ss_dssp HHHHSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGGC--------
T ss_pred hhcCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEEc--------
Confidence 268999999999999999999999999999999 888875 89999999999999999999 88776544
Q ss_pred EEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCC--C-CCCcHHH
Q psy14461 315 GVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVH--G-KPNNASM 391 (535)
Q Consensus 315 ~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~--~-~~~~~~~ 391 (535)
|+ ++++|.|++|+|++||++++ +.++++.+ +| |.||++++|+.|+|||+|||+. + .+.+++.
T Consensus 215 ---------g~--~~~~D~vv~a~G~~p~~~~~--~~~gl~~~-~g-i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~ 279 (385)
T 3klj_A 215 ---------GD--LIRSSCVITAVGVKPNLDFI--KDTEIASK-RG-ILVNDHMETSIKDIYACGDVAEFYGKNPGLINI 279 (385)
T ss_dssp ---------HH--HHHHSEEEECCCEEECCGGG--TTSCCCBS-SS-EEECTTCBCSSTTEEECGGGEEETTBCCCCHHH
T ss_pred ---------Ce--EEecCeEEECcCcccChhhh--hhcCCCcC-CC-EEECCCcccCCCCEEEEEeeEecCCCcccHHHH
Confidence 23 58899999999999999886 77788876 56 9999999999999999999983 1 3678899
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCC-Cc--EEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCcccccCCCCCcchh
Q psy14461 392 AAISARLIIERLYGMQDQLMDYSF-LP--VVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFV 468 (535)
Q Consensus 392 A~~~g~~aa~~i~g~~~~~~~~~~-~p--~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (535)
|..||++||+||+|.... |.. .| |..+++++++++|+++.+. . +. +.. . +
T Consensus 280 A~~qg~~aa~~i~g~~~~---~~~~~~~~~~~~~~~~~~~~G~~~~~~----~--~~-~~~--------~--~------- 332 (385)
T 3klj_A 280 ANKQGEVAGLNACGEDAS---YSEIIPSPILKVSGISIISCGDIENNK----P--SK-VFR--------S--T------- 332 (385)
T ss_dssp HHHHHHHHHHHHTTCCCC---CCCCCCCCEEEETTEEEEEESCCTTCC----C--SE-EEE--------E--E-------
T ss_pred HHHHHHHHHHHhcCCCcC---CCCCCCcEEEEeCCCcEEEEcCCCCCC----C--eE-EEE--------E--C-------
Confidence 999999999999996543 333 34 5566899999999997642 1 22 111 0 1
Q ss_pred hhhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCCCHHHH
Q psy14461 469 KLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAEL 532 (535)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~~l 532 (535)
.+..|+|++++ +++|+|++++|+.+.+. .+..+|+++.++++|
T Consensus 333 -----------------~~~~~~~~~~~--~~~l~g~~~~g~~~~~~--~~~~~i~~~~~~~~~ 375 (385)
T 3klj_A 333 -----------------QEDKYIVCMLK--ENKIDAAAVIGDVSLGT--KLKKAIDSSKSFDNI 375 (385)
T ss_dssp -----------------CSSCEEEEEEE--TTEEEEEEEESCHHHHH--HHHHHHHTTCBCSCC
T ss_pred -----------------CCCeEEEEEEE--CCEEEEEEEECCcHHHH--HHHHHHHcCCCcccc
Confidence 23579999995 68999999999976554 788999999988775
No 45
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=8.9e-41 Score=349.70 Aligned_cols=354 Identities=15% Similarity=0.123 Sum_probs=269.8
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCC--eEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQR--RDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKR 166 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~--~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (535)
++|+|||+|++|+.+|..+...+. +|+|||+++.++|..+.++... +.+. . .
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~--~~~~--------------~-~--------- 61 (408)
T 2gqw_A 8 APVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDF--MAHG--------------D-A--------- 61 (408)
T ss_dssp SSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHH--HHHC--------------C-G---------
T ss_pred CcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHH--hCCC--------------c-h---------
Confidence 468999999999999987765554 6999999988776654443210 1110 0 0
Q ss_pred HHHHHHHHHHHHHHhcCcEEEEeE-EEEec--CCEEEEce-eEEEcceEEEeeCceecC-CC-CC--Cce---echhhHH
Q psy14461 167 FCIRAKNDSMRELKALGIDIVRTA-AAFTN--PHTIKLSN-RSVTGFNFLLAVERRCLP-EP-RN--SAL---ISADDLF 235 (535)
Q Consensus 167 ~~~~~~~~~~~~~~~~gV~~~~g~-~~~~~--~~~v~~~~-~~~~~d~lViATGs~p~~-~i-~G--~~v---~~~~~~~ 235 (535)
+++.. . .+++.+|+++.++ +..++ .++|.+.+ .++.||+||||||++|.. ++ || +++ .+.+++.
T Consensus 62 --~~~~~--~-~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~~~~~~i~~G~~~~v~~~~~~~~~~ 136 (408)
T 2gqw_A 62 --EKIRL--D-CKRAPEVEWLLGVTAQSFDPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDAR 136 (408)
T ss_dssp --GGSBC--C-CTTSCSCEEEETCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCGGGTTCSSCEEECCSHHHHH
T ss_pred --hhhhH--H-HHHHCCCEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCCCCCccCCCCCcEEEECCHHHHH
Confidence 00000 0 3456799999986 66655 46788854 689999999999999998 88 88 344 3566765
Q ss_pred hccC---CCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCc-cCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEe
Q psy14461 236 RLGA---WPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLK-HFDQEMVRILLSSLTKAGVSI-QCCVIEKVISS 309 (535)
Q Consensus 236 ~~~~---~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~-~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~ 309 (535)
.+.. .+++|+|||+|++|+|+|..|+++|.+||++++ +.+++ .+++++.+.+.+.+++.||++ +++++++++ +
T Consensus 137 ~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~ 215 (408)
T 2gqw_A 137 RIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSV-D 215 (408)
T ss_dssp HHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEE-T
T ss_pred HHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEeCCEEEEEE-C
Confidence 5532 479999999999999999999999999999999 88887 589999999999999999999 999999998 3
Q ss_pred CCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCCCC---
Q psy14461 310 FDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKP--- 386 (535)
Q Consensus 310 ~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~~--- 386 (535)
+ .|++. +|+ ++++|.|++|+|++||++++ +.++++++ +| |.||+++||+.|+|||+|||+ ..+
T Consensus 216 --~--~v~~~---~g~--~i~~D~vi~a~G~~p~~~l~--~~~gl~~~-~g-i~Vd~~~~t~~~~IyA~GD~~-~~~~~~ 281 (408)
T 2gqw_A 216 --G--VVLLD---DGT--RIAADMVVVGIGVLANDALA--RAAGLACD-DG-IFVDAYGRTTCPDVYALGDVT-RQRNPL 281 (408)
T ss_dssp --T--EEEET---TSC--EEECSEEEECSCEEECCHHH--HHHTCCBS-SS-EECCTTCBCSSTTEEECGGGE-EEEETT
T ss_pred --C--EEEEC---CCC--EEEcCEEEECcCCCccHHHH--HhCCCCCC-CC-EEECCCCccCCCCEEEEEEEE-EecCcc
Confidence 3 56663 676 89999999999999999875 77788876 56 999999999999999999999 432
Q ss_pred -------CcHHHHHHHHHHHHHHHhCCCCCCCCCCCCcEE--EEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCccc
Q psy14461 387 -------NNASMAAISARLIIERLYGMQDQLMDYSFLPVV--VRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDN 457 (535)
Q Consensus 387 -------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~--~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~ 457 (535)
.+++.|.+||++||.||++... ..|..+|+. .+++++++++|+ +. .. ...+ . ..
T Consensus 282 ~g~~~~~~~~~~A~~~g~~aa~~i~g~~~--~~~~~~p~~~~~~~~~~~~~~G~-~~-----~~--~~~~-~---~~--- 344 (408)
T 2gqw_A 282 SGRFERIETWSNAQNQGIAVARHLVDPTA--PGYAELPWYWSDQGALRIQVAGL-AS-----GD--EEIV-R---GE--- 344 (408)
T ss_dssp TTEEECCCCHHHHHHHHHHHHHHHHCTTS--CCCCCCCEEEEEETTEEEEEEEC-SC-----CS--EEEE-E---SC---
T ss_pred CCceeeccHHHHHHHHHHHHHHHhcCCCC--CcCCCCCeEEEEECCceEEEECC-CC-----CC--EEEE-E---cc---
Confidence 2678999999999999998653 146667754 456799999999 21 11 1111 1 00
Q ss_pred ccCCCCCcchhhhhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCCCH--HHHcC
Q psy14461 458 LLDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTK--AELDG 534 (535)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~--~~l~~ 534 (535)
+.. ...+|.+++.+ +++|+|++++|+.+ .+..+..+|+.++++ .+|.+
T Consensus 345 ---~~~----------------------~~~~~~~~~~~--~~~l~G~~~~g~~~--~~~~~~~~i~~~~~~~~~~l~~ 394 (408)
T 2gqw_A 345 ---VSL----------------------DAPKFTLIELQ--KGRIVGATCVNNAR--DFAPLRRLLAVGAKPDRAALAD 394 (408)
T ss_dssp ---CCS----------------------SSCCEEEEEEE--TTEEEEEEEESCHH--HHHHHHHHHHTTCCCCHHHHHC
T ss_pred ---CCC----------------------CCCeEEEEEEe--CCEEEEEEEECChH--HHHHHHHHHHCCCCCChHHhcC
Confidence 110 13568888875 79999999999864 357889999999854 55544
No 46
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=1.9e-40 Score=349.58 Aligned_cols=363 Identities=18% Similarity=0.133 Sum_probs=277.4
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCC--eEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQR--RDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKR 166 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~--~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (535)
++++|||+|++|+.+|..+...+. +|+|||+++.++|..+.+.... +.+. ..+..+
T Consensus 5 ~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~--~~~~--------------~~~~~~------ 62 (431)
T 1q1r_A 5 DNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAY--LAGK--------------ATAESL------ 62 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTT--TTTC--------------SCSGGG------
T ss_pred CcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHH--hCCC--------------CChHHh------
Confidence 478999999999999987776665 8999999987766544332110 1110 001000
Q ss_pred HHHHHHHHHHHHHHhcCcEEEEeE-EEEec--CCEEEEce-eEEEcceEEEeeCceecC-CCCC---Cc---e---echh
Q psy14461 167 FCIRAKNDSMRELKALGIDIVRTA-AAFTN--PHTIKLSN-RSVTGFNFLLAVERRCLP-EPRN---SA---L---ISAD 232 (535)
Q Consensus 167 ~~~~~~~~~~~~~~~~gV~~~~g~-~~~~~--~~~v~~~~-~~~~~d~lViATGs~p~~-~i~G---~~---v---~~~~ 232 (535)
.....+.+++.||+++.++ +..++ .++|.+.+ .++.||+||||||++|+. ++|| .+ + .+.+
T Consensus 63 -----~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~p~~~~i~G~~~~~~~~v~~~~~~~ 137 (431)
T 1q1r_A 63 -----YLRTPDAYAAQNIQLLGGTQVTAINRDRQQVILSDGRALDYDRLVLATGGRPRPLPVASGAVGKANNFRYLRTLE 137 (431)
T ss_dssp -----BSSCHHHHHHTTEEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCGGGTTHHHHSTTEEESSSHH
T ss_pred -----cccCHHHHHhCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEcCCCCccCCCCCCcccCCCceEEEECCHH
Confidence 0011244566899998875 45544 46788754 689999999999999998 8888 23 4 3566
Q ss_pred hHHhcc---CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCcc-CcHHHHHHHHHhhhcCCeEE-cceEEEEE
Q psy14461 233 DLFRLG---AWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKH-FDQEMVRILLSSLTKAGVSI-QCCVIEKV 306 (535)
Q Consensus 233 ~~~~~~---~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~-~~~~~~~~~~~~l~~~gV~i-~~~~v~~i 306 (535)
++..+. ..+++|+|||+|++|+|+|..|++.|.+|+++++ +.+++. +++++.+.+.+.+++.||++ +++.++++
T Consensus 138 d~~~l~~~l~~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i 217 (431)
T 1q1r_A 138 DAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGF 217 (431)
T ss_dssp HHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEECSCCEEEE
T ss_pred HHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccchhhHHHHHHHHHHHHhCCeEEEeCCEEEEE
Confidence 665543 3479999999999999999999999999999999 888874 89999999999999999999 99999999
Q ss_pred EE--eCCCcE-EEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCC
Q psy14461 307 IS--SFDGMK-GVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVH 383 (535)
Q Consensus 307 ~~--~~~~~~-~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~ 383 (535)
+. . ++++ .|++ .+|+ ++++|.|++|+|++|+++++ +.++++++ +| |.||++++|+.|+|||+|||+
T Consensus 218 ~~~~~-~~~v~~v~~---~~G~--~i~~D~Vv~a~G~~p~~~l~--~~~gl~~~-~g-i~Vd~~~~ts~~~IyA~GD~~- 286 (431)
T 1q1r_A 218 EMSTD-QQKVTAVLC---EDGT--RLPADLVIAGIGLIPNCELA--SAAGLQVD-NG-IVINEHMQTSDPLIMAVGDCA- 286 (431)
T ss_dssp EECTT-TCCEEEEEE---TTSC--EEECSEEEECCCEEECCHHH--HHTTCCBS-SS-EECCTTSBCSSTTEEECGGGE-
T ss_pred EeccC-CCcEEEEEe---CCCC--EEEcCEEEECCCCCcCcchh--hccCCCCC-CC-EEECCCcccCCCCEEEEEeEE-
Confidence 86 4 3444 5666 3676 89999999999999999875 77788876 56 999999999999999999999
Q ss_pred CCC----------CcHHHHHHHHHHHHHHHhCCCCCCCCCCCCcEE--EEcCCceeeecCCHHHHHHhcCCCCEEEEEEe
Q psy14461 384 GKP----------NNASMAAISARLIIERLYGMQDQLMDYSFLPVV--VRGDVEFGTVGMSEEAAAKVYGADGLVIYKSS 451 (535)
Q Consensus 384 ~~~----------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~--~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~ 451 (535)
..+ ..++.|..||++||.||+|... .|..+|+. .+++++++++|+++.. . .+.+ ...
T Consensus 287 ~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~---~~~~~p~~~~~~~~~~~~~~G~~~~~-----~--~~~~-~~~ 355 (431)
T 1q1r_A 287 RFHSQLYDRWVRIESVPNALEQARKIAAILCGKVP---RDEAAPWFWSDQYEIGLKMVGLSEGY-----D--RIIV-RGS 355 (431)
T ss_dssp EEEETTTTEEEECCSHHHHHHHHHHHHHHHTTCCC---CCCCCCEEEEEETTEEEEEEECCTTC-----S--EEEE-EEE
T ss_pred EEccccCCceEeeCHHHHHHHHHHHHHHHhcCCCC---CCCCCCeEEEEECCceEEEEeCCCCC-----C--EEEE-Ecc
Confidence 432 2567899999999999998653 45567754 3457899999997631 1 1211 110
Q ss_pred cCCcccccCCCCCcchhhhhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCCCHHH
Q psy14461 452 YPTFDNLLDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAE 531 (535)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t~~~ 531 (535)
+ ....|++++. ++++|+|++++|+.+.+.+...+++++.+++.++
T Consensus 356 ---------~------------------------~~~~~~~~~~--~~~~l~G~~~~g~~~~~~~~~~~i~~~~~~~~~~ 400 (431)
T 1q1r_A 356 ---------L------------------------AQPDFSVFYL--QGDRVLAVDTVNRPVEFNQSKQIITDRLPVEPNL 400 (431)
T ss_dssp ---------T------------------------TTTEEEEEEE--ETTEEEEEEEESCHHHHHHHHHHHHTTCCCCHHH
T ss_pred ---------C------------------------CCCeEEEEEE--eCCEEEEEEEECChHHHHHHHHHHHCCCCCCHHH
Confidence 1 1246777654 3799999999999999999999999999999999
Q ss_pred HcCC
Q psy14461 532 LDGT 535 (535)
Q Consensus 532 l~~~ 535 (535)
|.++
T Consensus 401 l~~~ 404 (431)
T 1q1r_A 401 LGDE 404 (431)
T ss_dssp HTCT
T ss_pred hhCC
Confidence 8763
No 47
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=1.7e-39 Score=340.28 Aligned_cols=358 Identities=15% Similarity=0.144 Sum_probs=268.5
Q ss_pred EEEeeCCccHHHHHHHHHhhCCCe--EEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHH
Q psy14461 90 YLDRIGDEGILLEEELKRQTNQRR--DELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRF 167 (535)
Q Consensus 90 ~v~iiG~G~aG~~~al~~~~~~~~--V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (535)
+|+|||+|++|+++|..+...+.+ |+|||++++++|.+..++... +.+... . . .. ..
T Consensus 4 ~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~--~~g~~~---~-~---~~-~~----------- 62 (410)
T 3ef6_A 4 HVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAV--LDGSLE---R-P---PI-LA----------- 62 (410)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHH--HHTSSS---S-C---CB-SS-----------
T ss_pred CEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHH--hCCCCC---H-H---Hh-cC-----------
Confidence 689999999999999877666655 999999998888765544310 111100 0 0 00 00
Q ss_pred HHHHHHHHHHHHHhcCcEEEEe-EEEEec--CCEEEEce-eEEEcceEEEeeCceecC-CCCC---Ccee---chhhHHh
Q psy14461 168 CIRAKNDSMRELKALGIDIVRT-AAAFTN--PHTIKLSN-RSVTGFNFLLAVERRCLP-EPRN---SALI---SADDLFR 236 (535)
Q Consensus 168 ~~~~~~~~~~~~~~~gV~~~~g-~~~~~~--~~~v~~~~-~~~~~d~lViATGs~p~~-~i~G---~~v~---~~~~~~~ 236 (535)
...++++.+|+++.+ ++..++ .++|.+.+ .++.||+||||||++|+. ++|| ++++ +.+++..
T Consensus 63 -------~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~ipG~~~~~v~~~~~~~d~~~ 135 (410)
T 3ef6_A 63 -------EADWYGEARIDMLTGPEVTALDVQTRTISLDDGTTLSADAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQV 135 (410)
T ss_dssp -------CTTHHHHTTCEEEESCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCCCTTTTSTTEECCCSHHHHHH
T ss_pred -------CHHHHHHCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEccCCcccCCCCCCccccceEEeccHHHHHH
Confidence 013455679999999 676655 45787765 689999999999999999 8998 3444 5566554
Q ss_pred cc---CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCc-cCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeC
Q psy14461 237 LG---AWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLK-HFDQEMVRILLSSLTKAGVSI-QCCVIEKVISSF 310 (535)
Q Consensus 237 ~~---~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~-~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~ 310 (535)
+. ..+++++|||+|++|+|+|..|++.|.+||++++ +.+++ .+++++.+.+.+.++++||++ +++.+++++.+
T Consensus 136 l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~- 214 (410)
T 3ef6_A 136 LRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVGFSGE- 214 (410)
T ss_dssp HHHHCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEECSCCEEEEECS-
T ss_pred HHHHhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEecc-
Confidence 43 3479999999999999999999999999999999 88886 589999999999999999999 99999999875
Q ss_pred CCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCCCC----
Q psy14461 311 DGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKP---- 386 (535)
Q Consensus 311 ~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~~---- 386 (535)
+....|++. +|+ ++++|.|++|+|++|+++++ +.+|++++ +| |.||++++|+.|+|||+|||+ ..+
T Consensus 215 ~~~~~v~~~---dg~--~i~aD~Vv~a~G~~p~~~l~--~~~gl~~~-~g-i~vd~~~~t~~~~IyA~GD~a-~~~~~~g 284 (410)
T 3ef6_A 215 GQLEQVMAS---DGR--SFVADSALICVGAEPADQLA--RQAGLACD-RG-VIVDHCGATLAKGVFAVGDVA-SWPLRAG 284 (410)
T ss_dssp SSCCEEEET---TSC--EEECSEEEECSCEEECCHHH--HHTTCCBS-SS-EECCTTSBCSSTTEEECGGGE-EEEBTTS
T ss_pred CcEEEEEEC---CCC--EEEcCEEEEeeCCeecHHHH--HhCCCccC-Ce-EEEccCeeECCCCEEEEEcce-eccCCCC
Confidence 333467773 787 89999999999999999876 77888887 55 999999999999999999998 432
Q ss_pred -----CcHHHHHHHHHHHHHHHhCCCCCCCCCCCCc--EEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCccccc
Q psy14461 387 -----NNASMAAISARLIIERLYGMQDQLMDYSFLP--VVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLL 459 (535)
Q Consensus 387 -----~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p--~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~ 459 (535)
..++.|..||++||+||+|... .|..+| |+.+++..+.++|+++.. + ++.. .
T Consensus 285 ~~~~~~~~~~A~~qg~~aa~~i~g~~~---~~~~~p~~~~~~~~~~~~~~G~~~~~--------~-~~~~---~------ 343 (410)
T 3ef6_A 285 GRRSLETYMNAQRQAAAVAAAILGKNV---SAPQLPVSWTEIAGHRMQMAGDIEGP--------G-DFVS---R------ 343 (410)
T ss_dssp SEECCCCHHHHHHHHHHHHHHHTTCCC---CCCBCCEEEEEETTEEEEEESCSSSS--------S-EEEE---E------
T ss_pred CeeeechHHHHHHHHHHHHHHHcCCCC---CCCCCCeeEEEECCceEEEEcCCCCC--------C-EEEE---E------
Confidence 2478999999999999999653 455667 556678899999987531 1 1110 0
Q ss_pred CCCCCcchhhhhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCC--CHHHHcC
Q psy14461 460 DPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFL--TKAELDG 534 (535)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~--t~~~l~~ 534 (535)
... ....|.+++++ +++|+|++++|.. .....+..+|..+. +.++|.+
T Consensus 344 --~~~---------------------~~~~~~~~~~~--~~~l~g~~~~~~~--~~~~~~~~~i~~~~~~~~~~l~~ 393 (410)
T 3ef6_A 344 --GMP---------------------GSGAALLFRLQ--ERRIQAVVAVDAP--RDFALATRLVEARAAIEPARLAD 393 (410)
T ss_dssp --SCT---------------------TSSSEEEEEEE--TTEEEEEEEESCH--HHHHHHHHHHHHTCBCCHHHHHC
T ss_pred --eeC---------------------CCCeEEEEEEE--CCEEEEEEEECCh--HHHHHHHHHHhCCCCCCHHHhcC
Confidence 000 12458887774 6899999999984 23334445555544 4455543
No 48
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=1.2e-38 Score=334.39 Aligned_cols=361 Identities=15% Similarity=0.145 Sum_probs=272.9
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCe--EEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHH
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRR--DELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIK 165 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~--V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 165 (535)
..+|+|||+|++|+++|..+...+.+ |+|||++++++|.+..++... +.+. .+...+.
T Consensus 9 ~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~--~~~~--------------~~~~~~~---- 68 (415)
T 3lxd_A 9 RADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEY--LARE--------------KTFERIC---- 68 (415)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTT--TTTS--------------SCSGGGB----
T ss_pred CCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHH--HcCC--------------CCHHHhc----
Confidence 46899999999999999877766655 999999998887765444210 2211 0011111
Q ss_pred HHHHHHHHHHHHHHHhcCcEEEEe-EEEEec--CCEEEEce-eEEEcceEEEeeCceecC-CCCC---Ccee---chhhH
Q psy14461 166 RFCIRAKNDSMRELKALGIDIVRT-AAAFTN--PHTIKLSN-RSVTGFNFLLAVERRCLP-EPRN---SALI---SADDL 234 (535)
Q Consensus 166 ~~~~~~~~~~~~~~~~~gV~~~~g-~~~~~~--~~~v~~~~-~~~~~d~lViATGs~p~~-~i~G---~~v~---~~~~~ 234 (535)
......++..+|+++.+ ++..++ .+++.+.+ ..+.||+||||||++|+. ++|| ++++ +.+++
T Consensus 69 -------~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~i~g~~~~~v~~~~~~~d~ 141 (415)
T 3lxd_A 69 -------IRPAQFWEDKAVEMKLGAEVVSLDPAAHTVKLGDGSAIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDA 141 (415)
T ss_dssp -------SSCHHHHHHTTEEEEETCCEEEEETTTTEEEETTSCEEEEEEEEECCCEECCCCBTTSSCCBTEECCCSHHHH
T ss_pred -------cCCHHHHHHCCcEEEeCCEEEEEECCCCEEEECCCCEEEeeEEEEccCCccCCCCCCCccccCEEEEcCHHHH
Confidence 11124556789999998 566654 45777754 689999999999999998 8888 3444 55665
Q ss_pred Hhcc---CC-CCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCc-cCcHHHHHHHHHhhhcCCeEE-cceEEEEEE
Q psy14461 235 FRLG---AW-PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLK-HFDQEMVRILLSSLTKAGVSI-QCCVIEKVI 307 (535)
Q Consensus 235 ~~~~---~~-~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~-~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~ 307 (535)
..+. .. +++++|||+|++|+|+|..|++.|.+||++++ +.+++ .+++++.+.+.+.+++.||++ +++.|++++
T Consensus 142 ~~l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~ 221 (415)
T 3lxd_A 142 DRLMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIE 221 (415)
T ss_dssp HHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEE
T ss_pred HHHHHHhhhcCCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEECCEEEEEE
Confidence 5443 23 79999999999999999999999999999999 88887 589999999999999999999 999999998
Q ss_pred EeCCCcE-EEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCCCC
Q psy14461 308 SSFDGMK-GVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKP 386 (535)
Q Consensus 308 ~~~~~~~-~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~~ 386 (535)
.+ ++++ .|++. +|+ ++++|.|++|+|++|+++++ +.++++.+ +| |.||++++|+.|+|||+|||+ ..+
T Consensus 222 ~~-~~~v~~v~l~---dG~--~i~aD~Vv~a~G~~p~~~l~--~~~gl~~~-~g-i~vd~~~~t~~~~iyA~GD~a-~~~ 290 (415)
T 3lxd_A 222 GD-GTKVTGVRMQ---DGS--VIPADIVIVGIGIVPCVGAL--ISAGASGG-NG-VDVDEFCRTSLTDVYAIGDCA-AHA 290 (415)
T ss_dssp ES-SSBEEEEEES---SSC--EEECSEEEECSCCEESCHHH--HHTTCCCS-SS-EECCTTCBCSSTTEEECGGGE-EEE
T ss_pred ec-CCcEEEEEeC---CCC--EEEcCEEEECCCCccChHHH--HhCCCCcC-CC-EEECCCCCcCCCCEEEEEeee-eec
Confidence 75 4554 57773 787 89999999999999999876 77788876 56 999999999999999999998 433
Q ss_pred C-----------cHHHHHHHHHHHHHHHhCCCCCCCCCCCCc--EEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecC
Q psy14461 387 N-----------NASMAAISARLIIERLYGMQDQLMDYSFLP--VVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYP 453 (535)
Q Consensus 387 ~-----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p--~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~ 453 (535)
. .++.|..||++||+||+|... .|..+| |+.+++..+.++|++.. . +-.+...+.
T Consensus 291 ~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~---~~~~~p~~~~~~~~~~~~~~G~~~~------~--~~~~~~~~~- 358 (415)
T 3lxd_A 291 NDFADGAVIRLESVQNANDMATAAAKDICGAPV---PYKATPWFWSNQYDLKLQTVGLSTG------H--DNAVLRGDP- 358 (415)
T ss_dssp CGGGTTCEECCCSHHHHHHHHHHHHHHHTTCCC---CCCCCCEEEEEETTEEEEEEECCTT------C--SEEEEEEEG-
T ss_pred CcccCCcceeechHHHHHHHHHHHHHHhcCCCC---CCCCCCeeEeeeCCcEEEEEeCCCC------C--CEEEEEecC-
Confidence 2 358899999999999999653 466677 57778999999999742 1 111111100
Q ss_pred CcccccCCCCCcchhhhhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCC--CHHH
Q psy14461 454 TFDNLLDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFL--TKAE 531 (535)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~--t~~~ 531 (535)
....|.++++. +++|+|+..+|.. .....+..+|..+. +.++
T Consensus 359 --------------------------------~~~~~~~~~~~--~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 402 (415)
T 3lxd_A 359 --------------------------------ATRSFSVVYLK--GGKVVALDCVNMV--KDYVQGKKLVEARAQIAPEQ 402 (415)
T ss_dssp --------------------------------GGTEEEEEEEE--TTEEEEEEEESCH--HHHHHHHHHHHHTCCCCHHH
T ss_pred --------------------------------CCCeEEEEEEE--CCEEEEEEEECCh--HHHHHHHHHHHCCCCCCHHH
Confidence 13568999885 5899999999983 33344555666554 4455
Q ss_pred HcC
Q psy14461 532 LDG 534 (535)
Q Consensus 532 l~~ 534 (535)
|.+
T Consensus 403 l~~ 405 (415)
T 3lxd_A 403 LAD 405 (415)
T ss_dssp HTC
T ss_pred hcC
Confidence 543
No 49
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=2.9e-38 Score=330.26 Aligned_cols=358 Identities=15% Similarity=0.144 Sum_probs=271.0
Q ss_pred EEEeeCCccHHHHHHHHHhhCCC--eEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHH
Q psy14461 90 YLDRIGDEGILLEEELKRQTNQR--RDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRF 167 (535)
Q Consensus 90 ~v~iiG~G~aG~~~al~~~~~~~--~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (535)
+|+|||+|++|+++|..+...+. +|+|||++++++|.+..++... +.+.. ....+.
T Consensus 3 ~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~--l~~~~--------------~~~~~~------ 60 (404)
T 3fg2_P 3 TVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAY--LKSGG--------------DPNSLM------ 60 (404)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGG--GGSCC--------------CTTSSB------
T ss_pred CEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHH--HCCCC--------------CHHHcc------
Confidence 57999999999999987776666 8999999998887765444210 11110 000000
Q ss_pred HHHHHHHHHHHHHhcCcEEEEeEEEEec--CCEEEEce-eEEEcceEEEeeCceecC-CCCC---Ccee---chhhHHhc
Q psy14461 168 CIRAKNDSMRELKALGIDIVRTAAAFTN--PHTIKLSN-RSVTGFNFLLAVERRCLP-EPRN---SALI---SADDLFRL 237 (535)
Q Consensus 168 ~~~~~~~~~~~~~~~gV~~~~g~~~~~~--~~~v~~~~-~~~~~d~lViATGs~p~~-~i~G---~~v~---~~~~~~~~ 237 (535)
......+...+|+++..++..++ .+++.+.+ .++.||+||||||++|+. ++|| .+++ +.+++..+
T Consensus 61 -----~~~~~~~~~~~i~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~i~g~~~~~v~~~~~~~d~~~l 135 (404)
T 3fg2_P 61 -----FRPEKFFQDQAIELISDRMVSIDREGRKLLLASGTAIEYGHLVLATGARNRMLDVPNASLPDVLYLRTLDESEVL 135 (404)
T ss_dssp -----SSCHHHHHHTTEEEECCCEEEEETTTTEEEESSSCEEECSEEEECCCEEECCCCSTTTTSTTEECCSSHHHHHHH
T ss_pred -----CCCHHHHHhCCCEEEEEEEEEEECCCCEEEECCCCEEECCEEEEeeCCCccCCCCCCCCCCcEEEECCHHHHHHH
Confidence 01124456679999886666654 46777765 689999999999999998 8988 4455 44555443
Q ss_pred c---CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCc-cCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCC
Q psy14461 238 G---AWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLK-HFDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFD 311 (535)
Q Consensus 238 ~---~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~-~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~ 311 (535)
. ..+++++|||+|++|+|+|..|++.|.+|+++++ +.+++ .+++++.+.+.+.+++.||++ +++.|++++.+ +
T Consensus 136 ~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~ 214 (404)
T 3fg2_P 136 RQRMPDKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIAAE-G 214 (404)
T ss_dssp HHHGGGCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-T
T ss_pred HHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEECCEEEEEEec-C
Confidence 2 3578999999999999999999999999999999 88886 589999999999999999999 99999999876 3
Q ss_pred CcE-EEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCCCC----
Q psy14461 312 GMK-GVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKP---- 386 (535)
Q Consensus 312 ~~~-~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~~---- 386 (535)
+++ .|++ .+|+ ++++|.|++|+|++|+++++ +.+|++.+ +| |.||++++|+.|+|||+|||+. .+
T Consensus 215 ~~v~~V~~---~dG~--~i~aD~Vv~a~G~~p~~~l~--~~~gl~~~-~G-i~vd~~~~t~~~~iya~GD~a~-~~~~~~ 284 (404)
T 3fg2_P 215 DRVTGVVL---SDGN--TLPCDLVVVGVGVIPNVEIA--AAAGLPTA-AG-IIVDQQLLTSDPHISAIGDCAL-FESVRF 284 (404)
T ss_dssp TEEEEEEE---TTSC--EEECSEEEECCCEEECCHHH--HHTTCCBS-SS-EEECTTSBCSSTTEEECGGGEE-EEETTT
T ss_pred CcEEEEEe---CCCC--EEEcCEEEECcCCccCHHHH--HhCCCCCC-CC-EEECCCcccCCCCEEEeeccee-ecCccC
Confidence 444 4666 3787 89999999999999999876 77888877 56 9999999999999999999983 22
Q ss_pred ------CcHHHHHHHHHHHHHHHhCCCCCCCCCCCCc--EEEEcCCceeeecCCHHHHHHhcCCCCEEEEEEecCCcccc
Q psy14461 387 ------NNASMAAISARLIIERLYGMQDQLMDYSFLP--VVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNL 458 (535)
Q Consensus 387 ------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p--~~~~~~~~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~ 458 (535)
..++.|..||++||+||+|... .|..+| |+.+++..+.++|++.. . +-.+...+
T Consensus 285 g~~~~~~~~~~A~~qg~~aa~~i~g~~~---~~~~~p~~~~~~~~~~~~~~G~~~~------~--~~~~~~~~------- 346 (404)
T 3fg2_P 285 GETMRVESVQNATDQARCVAARLTGDAK---PYDGYPWFWSDQGDDKLQIVGLTAG------F--DQVVIRGS------- 346 (404)
T ss_dssp TEEECCCSHHHHHHHHHHHHHHTTTCCC---CCCCCCEEEEEETTEEEEEEECCTT------C--CEEEEEEE-------
T ss_pred CceeeehHHHHHHHHHHHHHHHhCCCCC---CCCCCCceEeEECCcEEEEEeCCCC------C--CEEEEEec-------
Confidence 2478999999999999998653 355666 67788999999999742 1 21121110
Q ss_pred cCCCCCcchhhhhhccCCcccccccccCcceEEEEEEECCCCeEEEEEEEcCchhHHHHHHHHHHHCCCC--HHHHc
Q psy14461 459 LDPLLPENFVKLVCLKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLT--KAELD 533 (535)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~ilGa~~~G~~a~e~i~~~~~~i~~~~t--~~~l~ 533 (535)
+ ....|.|+++. +++|+|+..+|.. .....+..+|..+.. .++|.
T Consensus 347 --~------------------------~~~~~~~~~~~--~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~ 393 (404)
T 3fg2_P 347 --V------------------------AERSFSAFCYK--AGKLIGIESVNRA--ADHVFGRKILPLDKSVTPEQAA 393 (404)
T ss_dssp --T------------------------TTTEEEEEEEE--TTEEEEEEEESCH--HHHHHHHHHTTTTCCCCHHHHH
T ss_pred --C------------------------CCCcEEEEEEE--CCEEEEEEEeCCH--HHHHHHHHHHHcCCCCCHHHhc
Confidence 1 13569999985 5899999999973 444556667776654 34554
No 50
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=2.8e-35 Score=296.39 Aligned_cols=288 Identities=14% Similarity=0.065 Sum_probs=203.4
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHH
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRF 167 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (535)
.+||+|||+||||+++|+++...+.+|+|||++...+...++.... ...+.+++++ ...+++.++..+..
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~----~~~i~~~~g~----~~~i~~~~l~~~~~-- 73 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTT----TTIIENFPGF----PNGIDGNELMMNMR-- 73 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGG----SSEECCSTTC----TTCEEHHHHHHHHH--
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCC----hHHhhhccCC----cccCCHHHHHHHHH--
Confidence 4799999999999999999988999999999986432222221111 0011112222 11234444444333
Q ss_pred HHHHHHHHHHHHHhcCcEEEEeEEEEec----CCEEEEce-eEEEcceEEEeeCceecC-CCCC-C-----ceechhhHH
Q psy14461 168 CIRAKNDSMRELKALGIDIVRTAAAFTN----PHTIKLSN-RSVTGFNFLLAVERRCLP-EPRN-S-----ALISADDLF 235 (535)
Q Consensus 168 ~~~~~~~~~~~~~~~gV~~~~g~~~~~~----~~~v~~~~-~~~~~d~lViATGs~p~~-~i~G-~-----~v~~~~~~~ 235 (535)
..++..++++...++.... ...+...+ .++.||+||||||++|+. ++|| + .+.......
T Consensus 74 ---------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~~~~ipG~~~~~~~~~~~~~~~~ 144 (314)
T 4a5l_A 74 ---------TQSEKYGTTIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICD 144 (314)
T ss_dssp ---------HHHHHTTCEEECCCEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHH
T ss_pred ---------HHHhhcCcEEEEeEEEEeecCCCceEEEECCCeEEEEeEEEEcccccccccCCCccccccccceeeehhhh
Confidence 4566678887766654422 22333433 789999999999999999 9999 1 233333332
Q ss_pred hcc--CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCC
Q psy14461 236 RLG--AWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFD 311 (535)
Q Consensus 236 ~~~--~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~ 311 (535)
... ..+++++|||||++|+|+|..|+++|.+||++++ +.+.. .++. ..+.+...++.. ....+.++....+
T Consensus 145 ~~~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~ 219 (314)
T 4a5l_A 145 GAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRA--SKTM---QERVLNHPKIEVIWNSELVELEGDGD 219 (314)
T ss_dssp TTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS--CHHH---HHHHHTCTTEEEECSEEEEEEEESSS
T ss_pred hhhhhcCCCeEEEECCChHHHHHHHHHHHhCCeeeeecccccccc--cchh---hhhhhcccceeeEeeeeeEEEEeeee
Confidence 222 3478999999999999999999999999999998 65443 2222 234455667888 8888888887532
Q ss_pred CcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCCCC-CcHH
Q psy14461 312 GMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKP-NNAS 390 (535)
Q Consensus 312 ~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~~-~~~~ 390 (535)
....+.+.....++.+++++|.|++++|++||++++. ..++++++|++ ||+++|||+|||||+|||+ +.+ .+++
T Consensus 220 ~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~pn~~~l~---~~~~~~~~G~i-v~~~~~Ts~pgIyA~GDv~-~~~~~~~~ 294 (314)
T 4a5l_A 220 LLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLG---GQVKTADDGYI-LTEGPKTSVDGVFACGDVC-DRVYRQAI 294 (314)
T ss_dssp SEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGT---TSSCBCTTSCB-CCBTTBCSSTTEEECSTTT-CSSCCCHH
T ss_pred ccceeEEeecccccceeeccccceEecccccChhHhc---ccceEcCCeeE-eCCCCccCCCCEEEEEecc-CCcchHHH
Confidence 2223444432345556899999999999999999873 24778888866 8899999999999999999 554 5889
Q ss_pred HHHHHHHHHHHHHh
Q psy14461 391 MAAISARLIIERLY 404 (535)
Q Consensus 391 ~A~~~g~~aa~~i~ 404 (535)
.|+.||++||.++.
T Consensus 295 ~A~~~G~~AA~~~~ 308 (314)
T 4a5l_A 295 VAAGSGCMAALSCE 308 (314)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999885
No 51
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.1e-34 Score=292.20 Aligned_cols=283 Identities=14% Similarity=0.066 Sum_probs=199.0
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRFC 168 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 168 (535)
+||+|||+||||+++|+++...+.+|+|||++. +++. |... +.+.++|++. .....++..+..
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~-~gG~-~~~~-------~~i~~~p~~~-----~~~~~~~~~~~~--- 69 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASRANLKTVMIERGI-PGGQ-MANT-------EEVENFPGFE-----MITGPDLSTKMF--- 69 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTGG-GGGC-------SCBCCSTTCS-----SBCHHHHHHHHH---
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC-CCCe-eecc-------cccCCcCCcc-----ccchHHHHHHHH---
Confidence 789999999999999999988999999999864 2211 1000 0001112211 223344433322
Q ss_pred HHHHHHHHHHHHhcCcEEEEeEEEE---ecC-CEEEEceeEEEcceEEEeeCceecC-CCCC-C-----ceechhhHHhc
Q psy14461 169 IRAKNDSMRELKALGIDIVRTAAAF---TNP-HTIKLSNRSVTGFNFLLAVERRCLP-EPRN-S-----ALISADDLFRL 237 (535)
Q Consensus 169 ~~~~~~~~~~~~~~gV~~~~g~~~~---~~~-~~v~~~~~~~~~d~lViATGs~p~~-~i~G-~-----~v~~~~~~~~~ 237 (535)
....+.++.+..+.... ... +.+..++.++.||+||||||++|+. ++|| + .+.+.......
T Consensus 70 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~liiAtGs~~~~~~ipG~~~~~~~~v~~~~~~~~~ 141 (312)
T 4gcm_A 70 --------EHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGA 141 (312)
T ss_dssp --------HHHHHTTCEEEECCCCEEEECSSCEEEECSSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGG
T ss_pred --------HHHhhccccccceeeeeeeeeecceeeccCCeEEEeceeEEcccCccCcCCCCChhhhCCccEEeeeccCcc
Confidence 33445566655543221 112 2333344789999999999999999 9999 2 23333222223
Q ss_pred cCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcE-
Q psy14461 238 GAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMK- 314 (535)
Q Consensus 238 ~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~- 314 (535)
...+|+|+|||||++|+|+|..|+++|.+||++++ +++++.... ..+.+++.++.. ....+..+... +...
T Consensus 142 ~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 215 (312)
T 4gcm_A 142 FFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQRIL-----QDRAFKNDKIDFIWSHTLKSINEK-DGKVG 215 (312)
T ss_dssp GGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSCHHH-----HHHHHHCTTEEEECSEEEEEEEEE-TTEEE
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCcchhH-----HHHHHHhcCcceeeecceeeeecc-ccccc
Confidence 34579999999999999999999999999999999 888764222 234556778888 77777776654 2222
Q ss_pred EEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCCCCCcHHHHHH
Q psy14461 315 GVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAI 394 (535)
Q Consensus 315 ~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~~~~~~~A~~ 394 (535)
........+++...+++|.|++++|.+|++.++ +..++. +++|+|.||+++|||+|||||+|||+..++++++.|+.
T Consensus 216 ~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~--~~~g~~-~~~G~I~vd~~~~Ts~pgIyA~GDv~~~~~~~~~~A~~ 292 (312)
T 4gcm_A 216 SVTLTSTKDGSEETHEADGVFIYIGMKPLTAPF--KDLGIT-NDVGYIVTKDDMTTSVPGIFAAGDVRDKGLRQIVTATG 292 (312)
T ss_dssp EEEEEETTTCCEEEEECSEEEECSCEEESCGGG--GGGTCB-CTTSCBCCCTTSBCSSTTEEECSTTBSCSCCSHHHHHH
T ss_pred cceeeeecCCceeEEeeeeEEeecCCCcCchhH--Hhccee-cCCCeEeeCCCCccCCCCEEEEeecCCCcchHHHHHHH
Confidence 222222235566689999999999999999876 666765 56899999999999999999999999335679999999
Q ss_pred HHHHHHHHHhC
Q psy14461 395 SARLIIERLYG 405 (535)
Q Consensus 395 ~g~~aa~~i~g 405 (535)
||++||.||..
T Consensus 293 ~G~~AA~~i~~ 303 (312)
T 4gcm_A 293 DGSIAAQSAAE 303 (312)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999963
No 52
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=2.6e-33 Score=283.75 Aligned_cols=284 Identities=12% Similarity=0.027 Sum_probs=207.6
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHH
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRF 167 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (535)
.++|+|||+|++|+.+|+.+...+.+|+|||+.. ++.. +..... +. .++++ ...+++.++..+.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~-~~~~~~---~~----~~~~~----~~~~~~~~~~~~l--- 71 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGM-PGGQ-IAWSEE---VE----NFPGF----PEPIAGMELAQRM--- 71 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTGG-GGGCSC---BC----CSTTC----SSCBCHHHHHHHH---
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCC-CCcc-cccccc---cc----cCCCC----CCCCCHHHHHHHH---
Confidence 4789999999999999998888889999999983 3221 100000 00 01111 1122344433332
Q ss_pred HHHHHHHHHHHHHhcCcEEEEeEEEEec----C---CEEEEc-eeEEEcceEEEeeCceecC-CCCC-C-----ceechh
Q psy14461 168 CIRAKNDSMRELKALGIDIVRTAAAFTN----P---HTIKLS-NRSVTGFNFLLAVERRCLP-EPRN-S-----ALISAD 232 (535)
Q Consensus 168 ~~~~~~~~~~~~~~~gV~~~~g~~~~~~----~---~~v~~~-~~~~~~d~lViATGs~p~~-~i~G-~-----~v~~~~ 232 (535)
...+++.|++++.+++..++ . .++.+. +.++.||+||+|||++|.. ++|| + .++...
T Consensus 72 --------~~~~~~~gv~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~i~g~~~~~~~~~~~~~ 143 (325)
T 2q7v_A 72 --------HQQAEKFGAKVEMDEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRKLGIPGEDNFWGKGVSTCA 143 (325)
T ss_dssp --------HHHHHHTTCEEEECCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCH
T ss_pred --------HHHHHHcCCEEEeeeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhhccCceEEEec
Confidence 24566779999887765532 2 245443 3689999999999999988 8888 2 233333
Q ss_pred hHHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeC
Q psy14461 233 DLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVISSF 310 (535)
Q Consensus 233 ~~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~ 310 (535)
........+++++|||+|++|+|+|..|++.|.+|+++++ +.+.. ++.+. .+.+++.||++ ++++++++..+
T Consensus 144 ~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~--~~~~~---~~l~~~~gv~i~~~~~v~~i~~~- 217 (325)
T 2q7v_A 144 TCDGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA--NKVAQ---ARAFANPKMKFIWDTAVEEIQGA- 217 (325)
T ss_dssp HHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS--CHHHH---HHHHTCTTEEEECSEEEEEEEES-
T ss_pred cCCHHHcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc--chHHH---HHHHhcCCceEecCCceEEEccC-
Confidence 2222334568999999999999999999999999999999 66543 33332 23334569999 99999999874
Q ss_pred CCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCCC-CCcH
Q psy14461 311 DGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGK-PNNA 389 (535)
Q Consensus 311 ~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~-~~~~ 389 (535)
+....|++++..+|++.++++|.|++|+|++||++++ +.. ++++++|+|.||++++|+.|+|||+|||+ +. ++++
T Consensus 218 ~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l--~~~-~~~~~~g~i~vd~~~~t~~~~vya~GD~~-~~~~~~~ 293 (325)
T 2q7v_A 218 DSVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTAFV--KDT-VSLRDDGYVDVRDEIYTNIPMLFAAGDVS-DYIYRQL 293 (325)
T ss_dssp SSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGG--TTT-SCBCTTSCBCCBTTTBCSSTTEEECSTTT-CSSCCCH
T ss_pred CcEEEEEEEECCCCcEEEEEcCEEEEccCCCCChHHH--hhh-cccCCCccEecCCCCccCCCCEEEeeccc-CccHHHH
Confidence 2323566653236766689999999999999999887 555 77888999999999999999999999999 55 6899
Q ss_pred HHHHHHHHHHHHHHhC
Q psy14461 390 SMAAISARLIIERLYG 405 (535)
Q Consensus 390 ~~A~~~g~~aa~~i~g 405 (535)
+.|++||++||.||..
T Consensus 294 ~~A~~~g~~aa~~i~~ 309 (325)
T 2q7v_A 294 ATSVGAGTRAAMMTER 309 (325)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999974
No 53
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=100.00 E-value=2.3e-36 Score=319.62 Aligned_cols=320 Identities=17% Similarity=0.176 Sum_probs=229.2
Q ss_pred CCCCChhHHHH------------hhhcCCcEEEEeCCCchh--hHHHH----------------HHHHHh----cC----
Q psy14461 42 PSFETPPAYIS------------RLSYENRILIFTHAVLRE--ENARA----------------ERYLNA----RG---- 83 (535)
Q Consensus 42 p~~~~l~~~~~------------~~i~~~~v~v~~k~~cp~--~~~~~----------------k~~~~~----~~---- 83 (535)
|..++++.|+. .+.++|++..++.+.||+ .|..+ ++.+.+ .+
T Consensus 35 P~~~~i~~~~~~~~~g~~~~A~~~~~~~n~~p~~~grvCp~~~~Ce~~C~~~~~~~~~v~I~~le~~~~~~~~~~~~~~~ 114 (456)
T 2vdc_G 35 PVSNNIPDWLKLTSEGRLEEAYEVSQATNNFPEICGRICPQDRLCEGNCVIEQSTHGAVTIGSVEKYINDTAWDQGWVKP 114 (456)
T ss_dssp TTCCCHHHHHHHHHHTCHHHHHHHHHHHCSCHHHHHHHCCGGGSGGGGCGGGGSSSCSCCHHHHHHHHHHHHHHHTCCCC
T ss_pred CCCCcHHHHHHHHHCCCHHHHHHHHHhhCCCCccccccCCCCcchHHhcccCCCCCCCccHHHHHHHHHHHHHHcCCCCC
Confidence 66667777644 456678888888889996 46532 122110 11
Q ss_pred ---CcceEEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHH
Q psy14461 84 ---DRFAVLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAA 160 (535)
Q Consensus 84 ---~~~~~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l 160 (535)
....-.+|+|||+|++|+++|..+...+.+|+|||+.+.+++. ..| +++.. ..+ .++
T Consensus 115 ~~~~~~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~----l~~--gip~~-------------~~~-~~~ 174 (456)
T 2vdc_G 115 RTPSRELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGL----LVY--GIPGF-------------KLE-KSV 174 (456)
T ss_dssp CCSCSSCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTH----HHH--TSCTT-------------TSC-HHH
T ss_pred CCCcCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCe----eee--cCCCc-------------cCC-HHH
Confidence 0112367999999999999999888888999999999866432 111 12211 111 122
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCcEEEEeEEEEecCCEEEEceeEEEcceEEEeeCce-ecC-CCCC---CceechhhHH
Q psy14461 161 TKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLSNRSVTGFNFLLAVERR-CLP-EPRN---SALISADDLF 235 (535)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~~~~~~~d~lViATGs~-p~~-~i~G---~~v~~~~~~~ 235 (535)
..+ ..+.++..||+++.++.. .+++++++..+.||+||||||+. |+. ++|| .++++..+++
T Consensus 175 ~~~-----------~~~~l~~~gv~~~~~~~v---~~~v~~~~~~~~~d~vvlAtG~~~~~~~~ipG~~~~gv~~a~~~l 240 (456)
T 2vdc_G 175 VER-----------RVKLLADAGVIYHPNFEV---GRDASLPELRRKHVAVLVATGVYKARDIKAPGSGLGNIVAALDYL 240 (456)
T ss_dssp HHH-----------HHHHHHHTTCEEETTCCB---TTTBCHHHHHSSCSEEEECCCCCEECCTTCSCCTTTTEEEHHHHH
T ss_pred HHH-----------HHHHHHHCCcEEEeCCEe---ccEEEhhHhHhhCCEEEEecCCCCCCCCCCCCCcCCCcEEHHHHH
Confidence 222 235567789998887631 23344444346799999999996 666 8998 5677765554
Q ss_pred h------c------------cCCCCcEEEECCChHHHHHHHHHHhCCC-cEEEEEc-CcC-CccCcHHHHHHHHHhhhcC
Q psy14461 236 R------L------------GAWPGKTLVLGGSLMAVEIAATLNFLGV-PVTLVYS-RRL-LKHFDQEMVRILLSSLTKA 294 (535)
Q Consensus 236 ~------~------------~~~~k~vvViGgG~~g~e~A~~l~~~g~-~Vtlv~~-~~~-l~~~~~~~~~~~~~~l~~~ 294 (535)
. + ...+++|+|||||++|+|+|..+.+.|. +||++++ +.. +|..+.++ +.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~~~~e~-----~~~~~~ 315 (456)
T 2vdc_G 241 TTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQREV-----AHAEEE 315 (456)
T ss_dssp HHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSSCHHHH-----HHHHHT
T ss_pred HHhhhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCCCHHHH-----HHHHHC
Confidence 2 1 1346899999999999999999999998 5999999 665 67655542 446678
Q ss_pred CeEE-cceEEEEEEEeCCCcEE-EEEec------CC---------CCCceEEEcCEEEEccCCCCCCC--CCCccccCee
Q psy14461 295 GVSI-QCCVIEKVISSFDGMKG-VRGFH------PE---------SKEPFADVFKTVVNAMEKKFDFA--ALNLHHIGVD 355 (535)
Q Consensus 295 gV~i-~~~~v~~i~~~~~~~~~-v~~~~------~~---------~G~~~~~~~D~vi~a~G~~p~~~--~l~l~~~gl~ 355 (535)
||++ ++..+++|..+ +++. |++.. .. +|+++++++|.||+|+|+.|++. ++ +..+++
T Consensus 316 Gv~~~~~~~~~~i~~~--g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l--~~~gl~ 391 (456)
T 2vdc_G 316 GVEFIWQAAPEGFTGD--TVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAF--DEPELK 391 (456)
T ss_dssp TCEEECCSSSCCEEEE--EEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHH--HSTTSC
T ss_pred CCEEEeCCCceEEeCC--CcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhc--ccCCee
Confidence 9999 99988888753 3221 22110 01 34456899999999999999976 44 677899
Q ss_pred ecCCCceEcCCC-CCcCCCCEEEeCCcCCCCCCcHHHHHHHHHHHHHHHhC
Q psy14461 356 IKKKSYVVCNEK-DQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYG 405 (535)
Q Consensus 356 ~~~~G~i~vd~~-~~T~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g 405 (535)
++++|+|.||++ ++|+.|+|||+|||+ .++.++..|+.||+.||.+|..
T Consensus 392 ~~~~G~i~vd~~~~~Ts~~~VfA~GD~~-~g~~~v~~A~~~G~~aA~~i~~ 441 (456)
T 2vdc_G 392 VTRWGTLLVDHRTKMTNMDGVFAAGDIV-RGASLVVWAIRDGRDAAEGIHA 441 (456)
T ss_dssp BCTTSSBCCCTTTCBCSSTTEEECGGGG-SSCCSHHHHHHHHHHHHHHHHH
T ss_pred ECCCCCEEECCCCCcCCCCCEEEecccc-CCchHHHHHHHHHHHHHHHHHH
Confidence 999999999997 999999999999999 7889999999999999999974
No 54
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=4.8e-33 Score=279.74 Aligned_cols=283 Identities=14% Similarity=0.046 Sum_probs=207.5
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCC-eEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQR-RDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRF 167 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~-~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (535)
++|+|||+|++|+.+|+.+...+. +|+|||++. ++.. ......+. .++++ ...++...+..+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~-~gg~----~~~~~~~~----~~~~~----~~~~~~~~~~~~l~-- 66 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGM-PGGQ----ITGSSEIE----NYPGV----KEVVSGLDFMQPWQ-- 66 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSS-TTCG----GGGCSCBC----CSTTC----CSCBCHHHHHHHHH--
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCC-CCcc----cccccccc----cCCCC----cccCCHHHHHHHHH--
Confidence 589999999999999998888888 999999963 2111 10000000 01111 11234444444332
Q ss_pred HHHHHHHHHHHHHhcCcEEEEeEEEEec--CC--EEEEce-eEEEcceEEEeeCceecC-CCCC-C-----ceechhhHH
Q psy14461 168 CIRAKNDSMRELKALGIDIVRTAAAFTN--PH--TIKLSN-RSVTGFNFLLAVERRCLP-EPRN-S-----ALISADDLF 235 (535)
Q Consensus 168 ~~~~~~~~~~~~~~~gV~~~~g~~~~~~--~~--~v~~~~-~~~~~d~lViATGs~p~~-~i~G-~-----~v~~~~~~~ 235 (535)
..+++.+++++.+++..++ .+ ++.+.+ .++.||+||+|||++|.. ++|| + .+++.....
T Consensus 67 ---------~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~ 137 (311)
T 2q0l_A 67 ---------EQCFRFGLKHEMTAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCD 137 (311)
T ss_dssp ---------HHHHTTSCEEECSCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEECCCCCBTHHHHBTTTEESCHHHH
T ss_pred ---------HHHHHcCCEEEEEEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCCCCCCCChhhccCCcEEEeecCC
Confidence 4456678998876655432 34 444433 679999999999999988 8888 2 244433333
Q ss_pred hccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhh-hcCCeEE-cceEEEEEEEeCCC
Q psy14461 236 RLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSL-TKAGVSI-QCCVIEKVISSFDG 312 (535)
Q Consensus 236 ~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l-~~~gV~i-~~~~v~~i~~~~~~ 312 (535)
.....+++|+|||+|++|+|+|..|++.|.+|+++++ +.+. .++++. +.+ ++.||++ +++.++++..+ ++
T Consensus 138 ~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--~~~~~~----~~l~~~~gv~v~~~~~v~~i~~~-~~ 210 (311)
T 2q0l_A 138 GFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR--CAPITL----EHAKNNDKIEFLTPYVVEEIKGD-AS 210 (311)
T ss_dssp GGGGTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC--SCHHHH----HHHHTCTTEEEETTEEEEEEEEE-TT
T ss_pred hhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC--CCHHHH----HHHhhCCCeEEEeCCEEEEEECC-CC
Confidence 3334579999999999999999999999999999999 6653 344433 334 3579999 99999999875 34
Q ss_pred cE-EEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCcccc----CeeecCCCceEcCCCCCcCCCCEEEeCCcCCCC-C
Q psy14461 313 MK-GVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHI----GVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGK-P 386 (535)
Q Consensus 313 ~~-~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~----gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~-~ 386 (535)
++ .|++++..+|++.++++|.|++|+|++|+++++ +.. +++++++|+|.||++++|+.|+|||+|||+ +. +
T Consensus 211 ~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l--~~~g~~~~l~~~~~g~i~vd~~~~t~~~~vya~GD~~-~~~~ 287 (311)
T 2q0l_A 211 GVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAVL--KQEDNSMLCKCDEYGSIVVDFSMKTNVQGLFAAGDIR-IFAP 287 (311)
T ss_dssp EEEEEEEEETTTCCEEEEECSEEEECSCEEECCGGG--BCTTSCBSSCBCTTSCBCCCTTCBCSSTTEEECSTTB-TTCC
T ss_pred cEeEEEEEecCCCceEEEecCEEEEEecCccChhhh--hcccccceeEeccCCCEEeCCccccCCCCeEEccccc-Ccch
Confidence 43 466653236766689999999999999999887 455 388888999999999999999999999999 54 7
Q ss_pred CcHHHHHHHHHHHHHHHhC
Q psy14461 387 NNASMAAISARLIIERLYG 405 (535)
Q Consensus 387 ~~~~~A~~~g~~aa~~i~g 405 (535)
++++.|+.||++||.||..
T Consensus 288 ~~~~~A~~~g~~aa~~i~~ 306 (311)
T 2q0l_A 288 KQVVCAASDGATAALSVIS 306 (311)
T ss_dssp CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHH
Confidence 8999999999999999964
No 55
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=2.7e-33 Score=301.74 Aligned_cols=281 Identities=13% Similarity=0.073 Sum_probs=207.3
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHH
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRF 167 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (535)
.++|+|||+|++|+.+|+.+...+.+|+|+|+. +++. .....++.. +.+ ....+..++..+
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~--~GG~----~~~~~~~~~----~~~-----~~~~~~~~l~~~---- 272 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARKGIRTGLMGER--FGGQ----VLDTVDIEN----YIS-----VPKTEGQKLAGA---- 272 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS--TTGG----GTTCSCBCC----BTT-----BSSBCHHHHHHH----
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCeEEEEECC--CCCc----ccccccccc----cCC-----CCCCCHHHHHHH----
Confidence 357999999999999999988889999999863 2111 111000110 000 112233333332
Q ss_pred HHHHHHHHHHHHHhcCcEEEEe-EEEEec-------CCEEEEce-eEEEcceEEEeeCceecC-CCCC-C-----ceech
Q psy14461 168 CIRAKNDSMRELKALGIDIVRT-AAAFTN-------PHTIKLSN-RSVTGFNFLLAVERRCLP-EPRN-S-----ALISA 231 (535)
Q Consensus 168 ~~~~~~~~~~~~~~~gV~~~~g-~~~~~~-------~~~v~~~~-~~~~~d~lViATGs~p~~-~i~G-~-----~v~~~ 231 (535)
+...+++.|++++.+ ++..++ ..+|++.+ .++.||+||+|||++|+. ++|| . .++..
T Consensus 273 -------l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~~~ipG~~~~~~~~v~~~ 345 (521)
T 1hyu_A 273 -------LKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRNMNVPGEDQYRTKGVTYC 345 (521)
T ss_dssp -------HHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTTTTTEECC
T ss_pred -------HHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCCCCCCChhhhcCceEEEe
Confidence 235567789999988 666653 23466644 689999999999999988 8888 2 23322
Q ss_pred hhHHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhc-CCeEE-cceEEEEEEE
Q psy14461 232 DDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTK-AGVSI-QCCVIEKVIS 308 (535)
Q Consensus 232 ~~~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~-~gV~i-~~~~v~~i~~ 308 (535)
.........+++|+|||||++|+|+|..|++.|.+||++++ +.+.+ + ..+.+.+++ .||++ +++.++++..
T Consensus 346 ~~~~~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~--~----~~l~~~l~~~~gV~v~~~~~v~~i~~ 419 (521)
T 1hyu_A 346 PHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA--D----QVLQDKVRSLKNVDIILNAQTTEVKG 419 (521)
T ss_dssp TTCCGGGGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS--C----HHHHHHHTTCTTEEEECSEEEEEEEE
T ss_pred ecCchhhcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc--C----HHHHHHHhcCCCcEEEeCCEEEEEEc
Confidence 21111123478999999999999999999999999999999 77653 3 234556666 69999 9999999987
Q ss_pred eCCCcE-EEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCCC-C
Q psy14461 309 SFDGMK-GVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGK-P 386 (535)
Q Consensus 309 ~~~~~~-~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~-~ 386 (535)
+ ++++ .+++.+..+|++.++++|.|++++|++||++++ +. .++++++|+|.||++++|+.|+|||+|||+ +. +
T Consensus 420 ~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~l--~~-~l~~~~~G~I~Vd~~~~ts~p~VfA~GD~~-~~~~ 494 (521)
T 1hyu_A 420 D-GSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWL--EG-ALERNRMGEIIIDAKCETSVKGVFAAGDCT-TVPY 494 (521)
T ss_dssp C-SSSEEEEEEEETTTCCEEEEECSEEEECCCEEESCGGG--TT-TSCBCTTSCBCCCTTCBCSSTTEEECSTTB-CCSS
T ss_pred C-CCcEEEEEEEeCCCCceEEEEcCEEEECcCCCCCchHH--hh-hhccCCCCcEEeCCCCCCCCCCEEEeeccc-CCCc
Confidence 5 3444 466654335766689999999999999999887 43 478888999999999999999999999999 54 4
Q ss_pred CcHHHHHHHHHHHHHHHhC
Q psy14461 387 NNASMAAISARLIIERLYG 405 (535)
Q Consensus 387 ~~~~~A~~~g~~aa~~i~g 405 (535)
+.+..|+.||+.||.+|+.
T Consensus 495 ~~~~~A~~~g~~aa~~i~~ 513 (521)
T 1hyu_A 495 KQIIIATGEGAKASLSAFD 513 (521)
T ss_dssp CCHHHHHHHHHHHHHHHHH
T ss_pred ceeeehHHhHHHHHHHHHH
Confidence 6899999999999999863
No 56
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=2.4e-33 Score=282.59 Aligned_cols=281 Identities=11% Similarity=0.017 Sum_probs=211.1
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccc--cccccccccccchhhcccccccccccccCHHHHHHHHH
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRK--KRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIK 165 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~--~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 165 (535)
.++|+|||+|++|+.+|+.+...+.+|+|||++ ++... ...++. .+ ++ ...+..++..+.
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~~~~~---~~-------~~-----~~~~~~~~~~~~- 76 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAGIVDD---YL-------GL-----IEIQASDMIKVF- 76 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCCEECC---ST-------TS-----TTEEHHHHHHHH-
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecccccccc---cC-------CC-----CCCCHHHHHHHH-
Confidence 478999999999999999988889999999998 22111 011110 11 11 112233333332
Q ss_pred HHHHHHHHHHHHHHHhcCcEEEEeEEEEecCC----EEEEce-eEEEcceEEEeeCceecC-CCCC-C-----ceechhh
Q psy14461 166 RFCIRAKNDSMRELKALGIDIVRTAAAFTNPH----TIKLSN-RSVTGFNFLLAVERRCLP-EPRN-S-----ALISADD 233 (535)
Q Consensus 166 ~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~----~v~~~~-~~~~~d~lViATGs~p~~-~i~G-~-----~v~~~~~ 233 (535)
...+++.|++++..++..++.. .+.+.+ .++.||+||+|||+.|.. ++|| . .++....
T Consensus 77 ----------~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~i~g~~~~~~~~~~~~~~ 146 (323)
T 3f8d_A 77 ----------NKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSV 146 (323)
T ss_dssp ----------HHHHHTTTCCEEESCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEECCCCCTTTTTTBTTTEESCHH
T ss_pred ----------HHHHHHcCCEEEEEEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCCccCCCCchhhhcCCceEEecc
Confidence 3556677999888766554322 455554 789999999999999988 8888 2 2323222
Q ss_pred HHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCC
Q psy14461 234 LFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFD 311 (535)
Q Consensus 234 ~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~ 311 (535)
.......+++++|||+|++|+|+|..|++.|.+|+++++ +.+++ ++++ +.+.+++.||++ +++.+++++.+ +
T Consensus 147 ~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~--~~~~---~~~~~~~~gv~~~~~~~v~~i~~~-~ 220 (323)
T 3f8d_A 147 ADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA--QPIY---VETVKKKPNVEFVLNSVVKEIKGD-K 220 (323)
T ss_dssp HHGGGGTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS--CHHH---HHHHHTCTTEEEECSEEEEEEEES-S
T ss_pred CCHhHcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc--CHHH---HHHHHhCCCcEEEeCCEEEEEecc-C
Confidence 222334578999999999999999999999999999999 77766 3333 333344569999 99999999875 3
Q ss_pred CcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCCC---CCc
Q psy14461 312 GMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGK---PNN 388 (535)
Q Consensus 312 ~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~---~~~ 388 (535)
+...|++.+..+|++.++++|.|++++|++|+++++ +.++++++++|+|.||++++|+.|+|||+|||+ +. +.+
T Consensus 221 ~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~--~~~g~~~~~~g~i~vd~~~~t~~~~vya~GD~~-~~~~~~~~ 297 (323)
T 3f8d_A 221 VVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFA--KSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCT-SAWLGFRQ 297 (323)
T ss_dssp SEEEEEEEETTTCCEEEEECSEEEECCCEECCHHHH--HHTTCCBCTTSSBCCCTTCBCSSTTEEECSTTB-STTTTCCC
T ss_pred ceeEEEEEECCCCceEEEEcCEEEEEECCCCChhHH--hhcCeeecCCCcEecCCCceecCCCEEEcceec-CCCCcccc
Confidence 444577764345776689999999999999998876 778899999999999999999999999999999 54 789
Q ss_pred HHHHHHHHHHHHHHHhC
Q psy14461 389 ASMAAISARLIIERLYG 405 (535)
Q Consensus 389 ~~~A~~~g~~aa~~i~g 405 (535)
++.|+.||+.||.||+.
T Consensus 298 ~~~A~~~g~~aa~~i~~ 314 (323)
T 3f8d_A 298 VITAVAQGAVAATSAYR 314 (323)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred eeehhhHHHHHHHHHHH
Confidence 99999999999999963
No 57
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=9.9e-34 Score=303.22 Aligned_cols=300 Identities=14% Similarity=0.144 Sum_probs=214.0
Q ss_pred EEEEEeeCCccHHHHHH--HHHhhCCCeEEEEecCCcccccccccccccccccchh------hcccccccccccccCHHH
Q psy14461 88 VLYLDRIGDEGILLEEE--LKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLE------LEQDSTSALNVTIRNWNA 159 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~a--l~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~------~~~~~~~~~~~~~~~~~~ 159 (535)
.++++|||+|++|+++| |++...+.+|+|||++++++|.++.+.... +.+.. ..+.++... ...+.+..
T Consensus 11 ~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 87 (493)
T 1m6i_A 11 HVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKEL--WFSDDPNVTKTLRFKQWNGK-ERSIYFQP 87 (493)
T ss_dssp EEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGG--GCC--CTHHHHCEEECTTSC-EEESBSSC
T ss_pred cCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHh--hcCCccchhhcccccccccc-cccccccc
Confidence 47899999999999999 455555899999999998877665332110 01000 000000000 00000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcEEEEe-EEEEec--CCEEEEce-eEEEcceEEEeeCceecC-CCCC-------Cc
Q psy14461 160 ATKLIKRFCIRAKNDSMRELKALGIDIVRT-AAAFTN--PHTIKLSN-RSVTGFNFLLAVERRCLP-EPRN-------SA 227 (535)
Q Consensus 160 l~~~~~~~~~~~~~~~~~~~~~~gV~~~~g-~~~~~~--~~~v~~~~-~~~~~d~lViATGs~p~~-~i~G-------~~ 227 (535)
...+.. ...+ ..+...||+++.+ .+..++ .++|.+.+ .++.||+||||||++|+. +++| +.
T Consensus 88 ~~~~~~--~~~l-----~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g~~i~yd~lviATGs~p~~~~~~~~~~~~~~~~ 160 (493)
T 1m6i_A 88 PSFYVS--AQDL-----PHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSR 160 (493)
T ss_dssp GGGSBC--TTTT-----TTSTTCEEEEEETCCEEEEEGGGTEEEETTSCEEEEEEEEECCCEEECCCHHHHTSCHHHHHT
T ss_pred hHhhcc--hhhh-----hhhhcCCeEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCCCCCCcccccccccCc
Confidence 000000 0000 0123468999998 454443 67888864 679999999999999987 5543 12
Q ss_pred e---echhhHHhcc---CCCCcEEEECCChHHHHHHHHHHh----CCCcEEEEEc-CcCCc-cCcHHHHHHHHHhhhcCC
Q psy14461 228 L---ISADDLFRLG---AWPGKTLVLGGSLMAVEIAATLNF----LGVPVTLVYS-RRLLK-HFDQEMVRILLSSLTKAG 295 (535)
Q Consensus 228 v---~~~~~~~~~~---~~~k~vvViGgG~~g~e~A~~l~~----~g~~Vtlv~~-~~~l~-~~~~~~~~~~~~~l~~~g 295 (535)
+ .+.+++..+. ..+++|+|||||++|+|+|..|++ .|.+|+++++ +.+++ .+++++.+.+.+.++++|
T Consensus 161 v~~~~~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l~~~~~~~~~~~l~~~G 240 (493)
T 1m6i_A 161 TTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREG 240 (493)
T ss_dssp EEECCSHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHTTT
T ss_pred eEEEcCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccccCCHHHHHHHHHHHHhcC
Confidence 2 3455655443 247999999999999999999987 4789999998 66554 578899999999999999
Q ss_pred eEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecC-CCceEcCCCCCcCCC
Q psy14461 296 VSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKK-KSYVVCNEKDQTSVG 373 (535)
Q Consensus 296 V~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~-~G~i~vd~~~~T~~~ 373 (535)
|++ +++.|++++.+ ++.+.|++ .+|+ ++++|.|++|+|++||++++ +.+|+++++ +|+|.||+++|| .|
T Consensus 241 V~v~~~~~V~~i~~~-~~~~~v~l---~dG~--~i~aD~Vv~a~G~~pn~~l~--~~~gl~~~~~~ggi~Vd~~l~t-~~ 311 (493)
T 1m6i_A 241 VKVMPNAIVQSVGVS-SGKLLIKL---KDGR--KVETDHIVAAVGLEPNVELA--KTGGLEIDSDFGGFRVNAELQA-RS 311 (493)
T ss_dssp CEEECSCCEEEEEEE-TTEEEEEE---TTSC--EEEESEEEECCCEEECCTTH--HHHTCCBCTTTCSEECCTTCEE-ET
T ss_pred CEEEeCCEEEEEEec-CCeEEEEE---CCCC--EEECCEEEECCCCCccHHHH--HHcCCccccCCCcEEECCCccc-CC
Confidence 999 99999999875 45566776 3777 89999999999999999876 777888875 688999999998 59
Q ss_pred CEEEeCCcCCCC---------CCcHHHHHHHHHHHHHHHhCCC
Q psy14461 374 NIFAVGGIVHGK---------PNNASMAAISARLIIERLYGMQ 407 (535)
Q Consensus 374 ~IyA~GD~~~~~---------~~~~~~A~~~g~~aa~~i~g~~ 407 (535)
+|||+|||+ .. ...+..|..||++||.||+|..
T Consensus 312 ~IyA~GD~a-~~~~~~~g~~~~~~~~~A~~qg~~aa~ni~g~~ 353 (493)
T 1m6i_A 312 NIWVAGDAA-CFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAA 353 (493)
T ss_dssp TEEECGGGE-EEEETTTEEECCCCHHHHHHHHHHHHHHHTSCC
T ss_pred CeeEeeeeE-eccCcccCccccchHHHHHHHHHHHHHHhcCCC
Confidence 999999998 32 1235589999999999999864
No 58
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=6.5e-33 Score=280.06 Aligned_cols=283 Identities=10% Similarity=0.040 Sum_probs=208.0
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHH
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRF 167 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (535)
.++|+|||+|++|+.+|+.+...+.+|+|||+.. ++.. +..... +. .++++ ..++...+..+.
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~-~~~~~~---~~----~~~~~-----~~~~~~~~~~~~--- 78 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV-AGGL-TAEAPL---VE----NYLGF-----KSIVGSELAKLF--- 78 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTGG-GGGCSC---BC----CBTTB-----SSBCHHHHHHHH---
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-CCcc-ccccch---hh----hcCCC-----cccCHHHHHHHH---
Confidence 3689999999999999998888889999999953 2211 100000 00 01111 112333333322
Q ss_pred HHHHHHHHHHHHHhcCcEEEEeEEEEec--CC--EEEEceeEEEcceEEEeeCceecC-CCCC-C-----ceechhhHHh
Q psy14461 168 CIRAKNDSMRELKALGIDIVRTAAAFTN--PH--TIKLSNRSVTGFNFLLAVERRCLP-EPRN-S-----ALISADDLFR 236 (535)
Q Consensus 168 ~~~~~~~~~~~~~~~gV~~~~g~~~~~~--~~--~v~~~~~~~~~d~lViATGs~p~~-~i~G-~-----~v~~~~~~~~ 236 (535)
...+++.+++++.+++..++ .+ +|.+++.++.||+||+|||++|.. ++|| . .++.......
T Consensus 79 --------~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~li~AtG~~~~~~~i~g~~~~~~~~~~~~~~~~~ 150 (319)
T 3cty_A 79 --------ADHAANYAKIREGVEVRSIKKTQGGFDIETNDDTYHAKYVIITTGTTHKHLGVKGESEYFGKGTSYCSTCDG 150 (319)
T ss_dssp --------HHHHHTTSEEEETCCEEEEEEETTEEEEEESSSEEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHHHG
T ss_pred --------HHHHHHcCCEEEEeeEEEEEEeCCEEEEEECCCEEEeCEEEECCCCCcccCCCCChHHhCCceEEEEEecch
Confidence 24556678988776665443 34 354545679999999999999988 8887 2 2333222222
Q ss_pred ccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcE
Q psy14461 237 LGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMK 314 (535)
Q Consensus 237 ~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~ 314 (535)
....+++++|||+|++|+|+|..|++.|.+|+++++ +.+.. ++. +.+.+++.||++ ++++++++..+ ++++
T Consensus 151 ~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~--~~~----l~~~l~~~gv~i~~~~~v~~i~~~-~~~v 223 (319)
T 3cty_A 151 YLFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC--ENA----YVQEIKKRNIPYIMNAQVTEIVGD-GKKV 223 (319)
T ss_dssp GGGBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS--CHH----HHHHHHHTTCCEECSEEEEEEEES-SSSE
T ss_pred hhcCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC--CHH----HHHHHhcCCcEEEcCCeEEEEecC-CceE
Confidence 233468999999999999999999999999999999 66542 333 344556789999 99999999875 3423
Q ss_pred -EEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCCC-CCcHHHH
Q psy14461 315 -GVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGK-PNNASMA 392 (535)
Q Consensus 315 -~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~-~~~~~~A 392 (535)
.|.+.+..+|+..++++|.|++|+|++||++++ +..+++++++|+|.||++++|+.|+|||+|||+ +. +.+++.|
T Consensus 224 ~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l--~~~gl~~~~~g~i~vd~~~~t~~~~vya~GD~~-~~~~~~~~~A 300 (319)
T 3cty_A 224 TGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFL--KDSGVKLDERGYIVVDSRQRTSVPGVYAAGDVT-SGNFAQIASA 300 (319)
T ss_dssp EEEEEEETTTCCEEEECCSEEEECCCEEECCGGG--TTSCCCBCTTSCBCCCTTCBCSSTTEEECSTTB-TTCCCCHHHH
T ss_pred EEEEEEEcCCCceEEEecCEEEEeeCCccChHHH--hhccccccCCccEeCCCCCccCCCCEEEeeccc-CcchhhHHHH
Confidence 466653236765679999999999999999887 677888898999999999999999999999999 54 5789999
Q ss_pred HHHHHHHHHHHhC
Q psy14461 393 AISARLIIERLYG 405 (535)
Q Consensus 393 ~~~g~~aa~~i~g 405 (535)
+.||++||.||..
T Consensus 301 ~~~g~~aa~~i~~ 313 (319)
T 3cty_A 301 VGDGCKAALSLYS 313 (319)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999964
No 59
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=9.4e-33 Score=277.49 Aligned_cols=277 Identities=14% Similarity=0.059 Sum_probs=206.2
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccc---cccccccccccchhhcccccccccccccCHHHHHHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRK---KRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIK 165 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~---~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 165 (535)
++|+|||+|++|+.+|+.+...+.+|+|+|+.. ++.. .+++.+ ++ ....+...+..+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~--gG~~~~~~~~~~~-----------~~-----~~~~~~~~~~~~-- 61 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGERF--GGQILDTVDIENY-----------IS-----VPKTEGQKLAGA-- 61 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSST--TGGGGGCCEECCB-----------TT-----BSSEEHHHHHHH--
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC--Cceeccccccccc-----------cC-----cCCCCHHHHHHH--
Confidence 578999999999999999888899999998642 1110 111111 00 111223333322
Q ss_pred HHHHHHHHHHHHHHHhcCcEEEEe-EEEEecC-------CEEEEce-eEEEcceEEEeeCceecC-CCCC-C-----cee
Q psy14461 166 RFCIRAKNDSMRELKALGIDIVRT-AAAFTNP-------HTIKLSN-RSVTGFNFLLAVERRCLP-EPRN-S-----ALI 229 (535)
Q Consensus 166 ~~~~~~~~~~~~~~~~~gV~~~~g-~~~~~~~-------~~v~~~~-~~~~~d~lViATGs~p~~-~i~G-~-----~v~ 229 (535)
+...+++.+++++.+ ++..++. ..+.+.+ .++.||+||+|||++|.. ++|| + .++
T Consensus 62 ---------~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~ 132 (310)
T 1fl2_A 62 ---------LKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGEDQYRTKGVT 132 (310)
T ss_dssp ---------HHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEE
T ss_pred ---------HHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhhcccceeE
Confidence 235566789999988 6766532 3455544 589999999999999988 8888 2 244
Q ss_pred chhhHHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhc-CCeEE-cceEEEEE
Q psy14461 230 SADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTK-AGVSI-QCCVIEKV 306 (535)
Q Consensus 230 ~~~~~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~-~gV~i-~~~~v~~i 306 (535)
...........+++|+|||+|++|+|+|..|++.|.+|+++++ +.+. +++. +.+.+++ .||++ ++++++++
T Consensus 133 ~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--~~~~----~~~~l~~~~gv~v~~~~~v~~i 206 (310)
T 1fl2_A 133 YCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK--ADQV----LQDKLRSLKNVDIILNAQTTEV 206 (310)
T ss_dssp SCHHHHGGGGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC--SCHH----HHHHHHTCTTEEEESSEEEEEE
T ss_pred EeccCcHhhcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC--ccHH----HHHHHhhCCCeEEecCCceEEE
Confidence 4333322233578999999999999999999999999999999 7653 3433 3445555 69999 99999999
Q ss_pred EEeCCCcE-EEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCCC
Q psy14461 307 ISSFDGMK-GVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGK 385 (535)
Q Consensus 307 ~~~~~~~~-~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~ 385 (535)
..+ ++++ .|++.+..+|++.++++|.|++|+|++||++++ +.. ++++++|+|.||++++|+.|+|||+|||+ +.
T Consensus 207 ~~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l--~~~-l~~~~~g~i~vd~~~~t~~~~vya~GD~~-~~ 281 (310)
T 1fl2_A 207 KGD-GSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWL--EGA-VERNRMGEIIIDAKCETNVKGVFAAGDCT-TV 281 (310)
T ss_dssp EES-SSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGG--TTT-SCBCTTSCBCCCTTCBCSSTTEEECSTTB-SC
T ss_pred EcC-CCcEEEEEEEECCCCcEEEEEcCEEEEeeCCccCchHH--hcc-ccccCCCcEEcCCCCccCCCCEEEeeccc-CC
Confidence 875 3444 566654335766689999999999999999876 433 77888999999999999999999999999 54
Q ss_pred -CCcHHHHHHHHHHHHHHHhC
Q psy14461 386 -PNNASMAAISARLIIERLYG 405 (535)
Q Consensus 386 -~~~~~~A~~~g~~aa~~i~g 405 (535)
+..+..|+.||+.||.||..
T Consensus 282 ~~~~~~~A~~~g~~aa~~i~~ 302 (310)
T 1fl2_A 282 PYKQIIIATGEGAKASLSAFD 302 (310)
T ss_dssp SSCCHHHHHHHHHHHHHHHHH
T ss_pred cchhhhhhHhhHHHHHHHHHH
Confidence 46889999999999999974
No 60
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=3.5e-33 Score=280.59 Aligned_cols=287 Identities=12% Similarity=0.046 Sum_probs=212.4
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEE-EecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHH
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDEL-QERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKR 166 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~l-ie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (535)
.++|+|||+|++|+++|..+...+.+|+| +|++ .+++... .... +. .+|++ .......++..+..
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~-~~gG~~~-~~~~---~~----~~~~~----~~~~~~~~~~~~~~- 69 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKG-MPGGQIT-SSSE---IE----NYPGV----AQVMDGISFMAPWS- 69 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSS-STTGGGG-GCSC---BC----CSTTC----CSCBCHHHHHHHHH-
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC-CCCceee-eece---ec----cCCCC----CCCCCHHHHHHHHH-
Confidence 36899999999999999988888999999 9994 3322110 0000 10 01111 11234444444433
Q ss_pred HHHHHHHHHHHHHHhcCcEEEEeEEEEe-cC--CEEE--Ece-eEEEcceEEEeeCceecC-CCCC-C-----ceechhh
Q psy14461 167 FCIRAKNDSMRELKALGIDIVRTAAAFT-NP--HTIK--LSN-RSVTGFNFLLAVERRCLP-EPRN-S-----ALISADD 233 (535)
Q Consensus 167 ~~~~~~~~~~~~~~~~gV~~~~g~~~~~-~~--~~v~--~~~-~~~~~d~lViATGs~p~~-~i~G-~-----~v~~~~~ 233 (535)
..++..+++++.+++..+ +. +.+. +.. .++.||+||+|||++|.. ++|| + .+++...
T Consensus 70 ----------~~~~~~~v~~~~~~v~~i~~~~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~g~~~~~~~~~~~~~~ 139 (315)
T 3r9u_A 70 ----------EQCMRFGLKHEMVGVEQILKNSDGSFTIKLEGGKTELAKAVIVCTGSAPKKAGFKGEDEFFGKGVSTCAT 139 (315)
T ss_dssp ----------HHHTTTCCEEECCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHH
T ss_pred ----------HHHHHcCcEEEEEEEEEEecCCCCcEEEEEecCCEEEeCEEEEeeCCCCCCCCCCChhhcCCCeEEeeec
Confidence 556778999988876655 33 3343 421 289999999999999988 8888 2 2444444
Q ss_pred HHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCC
Q psy14461 234 LFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFD 311 (535)
Q Consensus 234 ~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~ 311 (535)
.......+++++|||+|++|+|+|..|++.|.+|+++++ +.+. .++++ +.+.+++.||++ +++.++++..+ +
T Consensus 140 ~~~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~--~~~~~---~~~~~~~~gv~~~~~~~v~~i~~~-~ 213 (315)
T 3r9u_A 140 CDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFR--AAPST---VEKVKKNEKIELITSASVDEVYGD-K 213 (315)
T ss_dssp HHGGGGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCB--SCHHH---HHHHHHCTTEEEECSCEEEEEEEE-T
T ss_pred ccccccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCC--CCHHH---HHHHHhcCCeEEEeCcEEEEEEcC-C
Confidence 444445679999999999999999999999999999999 6653 24433 344456889999 99999999876 3
Q ss_pred CcE-EEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCc-cccC-eeecCCCceEcCCCCCcCCCCEEEeCCcCCCCCCc
Q psy14461 312 GMK-GVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNL-HHIG-VDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNN 388 (535)
Q Consensus 312 ~~~-~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l-~~~g-l~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~~~~ 388 (535)
+++ .|++. ..+|++.++++|.|++|+|++|++.++.. +.+| ++++++|+|.||++++|+.|+|||+|||+...++.
T Consensus 214 ~~~~~v~~~-~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~vd~~~~t~~~~v~a~GD~~~~~~~~ 292 (315)
T 3r9u_A 214 MGVAGVKVK-LKDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQTSVAGLFAAGDLRKDAPKQ 292 (315)
T ss_dssp TEEEEEEEE-CTTSCEEEECCSCEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBCSSTTEEECGGGBTTCCCC
T ss_pred CcEEEEEEE-cCCCCeEEeecCeEEEEEcCCCCchhhhcccccceeeecCCCcEEeCCCcccCCCCEEEeecccCCchhh
Confidence 343 35554 24777678999999999999999988743 3365 88898999999999999999999999998336789
Q ss_pred HHHHHHHHHHHHHHHhC
Q psy14461 389 ASMAAISARLIIERLYG 405 (535)
Q Consensus 389 ~~~A~~~g~~aa~~i~g 405 (535)
+..|+.||+.||.||..
T Consensus 293 ~~~A~~~g~~aa~~i~~ 309 (315)
T 3r9u_A 293 VICAAGDGAVAALSAMA 309 (315)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hhhHHhhHHHHHHHHHH
Confidence 99999999999999863
No 61
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=4.6e-33 Score=282.60 Aligned_cols=289 Identities=15% Similarity=0.059 Sum_probs=210.8
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHH
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRF 167 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (535)
..+|+|||+|++|+.+|+.+...+.+|+|||+.+......++...+...+. .++++. ......++..+
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~----~~~~~~----~~~~~~~~~~~---- 89 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIE----NFPGFP----DGLTGSELMDR---- 89 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEEC----CSTTCT----TCEEHHHHHHH----
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhc----ccCCCc----ccCCHHHHHHH----
Confidence 478999999999999999998889999999996522222222222100000 011110 11122333333
Q ss_pred HHHHHHHHHHHHHhcCcEEEEeEEEEec--CCEEEE------ceeEEEcceEEEeeCceecC-CCCC-C-----ceechh
Q psy14461 168 CIRAKNDSMRELKALGIDIVRTAAAFTN--PHTIKL------SNRSVTGFNFLLAVERRCLP-EPRN-S-----ALISAD 232 (535)
Q Consensus 168 ~~~~~~~~~~~~~~~gV~~~~g~~~~~~--~~~v~~------~~~~~~~d~lViATGs~p~~-~i~G-~-----~v~~~~ 232 (535)
+...++..|++++.+++..++ .+.+.+ ++.++.||+||+|||++|.. ++|| + .+.+..
T Consensus 90 -------~~~~~~~~gv~i~~~~v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~~~~g~~~~~~~~~~~~~ 162 (338)
T 3itj_A 90 -------MREQSTKFGTEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMHLPGEETYWQKGISACA 162 (338)
T ss_dssp -------HHHHHHHTTCEEECSCEEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCH
T ss_pred -------HHHHHHHcCCEEEEeEEEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcCCCCCCCchhccCccEEEch
Confidence 235666789999988865543 334444 23679999999999999998 8998 2 333333
Q ss_pred hHHhc--cCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhc-CCeEE-cceEEEEEE
Q psy14461 233 DLFRL--GAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTK-AGVSI-QCCVIEKVI 307 (535)
Q Consensus 233 ~~~~~--~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~-~gV~i-~~~~v~~i~ 307 (535)
..... ...+++++|||+|++|+|+|..|++.|.+|+++++ +.+++ ...+.+.+.+ .||++ +++.+++++
T Consensus 163 ~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~------~~~~~~~l~~~~gv~i~~~~~v~~i~ 236 (338)
T 3itj_A 163 VCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------STIMQKRAEKNEKIEILYNTVALEAK 236 (338)
T ss_dssp HHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS------CHHHHHHHHHCTTEEEECSEEEEEEE
T ss_pred hcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC------CHHHHHHHHhcCCeEEeecceeEEEE
Confidence 32222 23578999999999999999999999999999999 77655 2233444544 49999 999999998
Q ss_pred EeCCCcE-EEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEc-CCCCCcCCCCEEEeCCcCCCC
Q psy14461 308 SSFDGMK-GVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVC-NEKDQTSVGNIFAVGGIVHGK 385 (535)
Q Consensus 308 ~~~~~~~-~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~v-d~~~~T~~~~IyA~GD~~~~~ 385 (535)
.+ ++.+ .|++++..+|+..++++|.|++|+|++|++.++ +. +++++++|+|.+ |++++|+.|+|||+|||+...
T Consensus 237 ~~-~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~--~~-~l~~~~~G~i~v~~~~~~t~~~~vya~GD~~~~~ 312 (338)
T 3itj_A 237 GD-GKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIV--AG-QVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSK 312 (338)
T ss_dssp ES-SSSEEEEEEEETTTTEEEEEECSEEEECSCEEECCGGG--BT-TBCBCTTSCBCCCTTSSBCSSTTEEECGGGGCSS
T ss_pred cc-cCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCChhHh--hC-ceEecCCCcEEEcCcccccCCCCEEEeeccCCCC
Confidence 86 3433 477764335655689999999999999999887 34 888999999995 889999999999999999335
Q ss_pred CCcHHHHHHHHHHHHHHHhC
Q psy14461 386 PNNASMAAISARLIIERLYG 405 (535)
Q Consensus 386 ~~~~~~A~~~g~~aa~~i~g 405 (535)
+..+..|+.||+.||.||..
T Consensus 313 ~~~~~~A~~~g~~aa~~i~~ 332 (338)
T 3itj_A 313 YRQAITSAGSGCMAALDAEK 332 (338)
T ss_dssp CCCHHHHHHHHHHHHHHHHH
T ss_pred ccceeeehhhhHHHHHHHHH
Confidence 68899999999999999964
No 62
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=6.6e-34 Score=304.59 Aligned_cols=282 Identities=16% Similarity=0.095 Sum_probs=211.6
Q ss_pred EEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHHHH
Q psy14461 90 YLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRFCI 169 (535)
Q Consensus 90 ~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 169 (535)
+|+|||+|++|+.+|.++...+.+|||||+++++.|.+ .|+.. ..|. ++..++..
T Consensus 44 rVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~P-lL~~v---a~G~--------------l~~~~i~~------- 98 (502)
T 4g6h_A 44 NVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTP-LLPSA---PVGT--------------VDEKSIIE------- 98 (502)
T ss_dssp EEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGG-GGGGT---TTTS--------------SCGGGGEE-------
T ss_pred CEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCccccc-chhHH---hhcc--------------ccHHHhhh-------
Confidence 57999999999999988877789999999999876653 23222 1221 11111110
Q ss_pred HHHHHHHHH--HHhcCcEEEEeEEEEec--CCEEEEc---------------------eeEEEcceEEEeeCceecC-CC
Q psy14461 170 RAKNDSMRE--LKALGIDIVRTAAAFTN--PHTIKLS---------------------NRSVTGFNFLLAVERRCLP-EP 223 (535)
Q Consensus 170 ~~~~~~~~~--~~~~gV~~~~g~~~~~~--~~~v~~~---------------------~~~~~~d~lViATGs~p~~-~i 223 (535)
.+... .+..+++++.+++..+| .++|++. +.++.||+||||||++|.. ++
T Consensus 99 ----p~~~~~~~~~~~v~~~~~~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~i 174 (502)
T 4g6h_A 99 ----PIVNFALKKKGNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGI 174 (502)
T ss_dssp ----EHHHHHTTCSSCEEEEEEEEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTTC
T ss_pred ----hHHHHHHhhcCCeEEEEEEEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCCc
Confidence 01111 13458999999987764 5677653 2579999999999999999 99
Q ss_pred CC--Cc---eechhhHHhcc-------------C-------CCCcEEEECCChHHHHHHHHHHhCC--------------
Q psy14461 224 RN--SA---LISADDLFRLG-------------A-------WPGKTLVLGGSLMAVEIAATLNFLG-------------- 264 (535)
Q Consensus 224 ~G--~~---v~~~~~~~~~~-------------~-------~~k~vvViGgG~~g~e~A~~l~~~g-------------- 264 (535)
|| ++ +.+.+|+..+. . ...+++|||||++|+|+|..|++++
T Consensus 175 pG~~e~a~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~ 254 (502)
T 4g6h_A 175 PGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEE 254 (502)
T ss_dssp TTHHHHCEECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHH
T ss_pred cCcccccCCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhccccccc
Confidence 99 33 33445543321 0 1247999999999999999887542
Q ss_pred CcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCC--ceEEEcCEEEEccCC
Q psy14461 265 VPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKE--PFADVFKTVVNAMEK 340 (535)
Q Consensus 265 ~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~--~~~~~~D~vi~a~G~ 340 (535)
.+|+++++ +++++.+++++++.+++.|+++||++ ++++|++++. +.+.+.... .+|+ ++++++|+||||+|.
T Consensus 255 ~~V~lve~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~---~~~~~~~~~-~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 255 VQIHLVEALPIVLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEE---KQLLAKTKH-EDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp CEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEETTEEEEEECS---SEEEEEEEC-TTSCEEEEEEECSEEEECCCE
T ss_pred ceeEEeccccccccCCCHHHHHHHHHHHHhcceeeecCceEEEEeC---CceEEEEEe-cCcccceeeeccCEEEEccCC
Confidence 68999999 99999999999999999999999999 9999999974 333333321 3553 247999999999999
Q ss_pred CCCCCCCC-ccccCeeecCCCceEcCCCCCc-CCCCEEEeCCcCC-CCCCcHHHHHHHHHHHHHHHh
Q psy14461 341 KFDFAALN-LHHIGVDIKKKSYVVCNEKDQT-SVGNIFAVGGIVH-GKPNNASMAAISARLIIERLY 404 (535)
Q Consensus 341 ~p~~~~l~-l~~~gl~~~~~G~i~vd~~~~T-~~~~IyA~GD~~~-~~~~~~~~A~~~g~~aa~~i~ 404 (535)
+||..... ....+...+.+|+|.||++||| +.|||||+|||+. +.|++++.|.+||+++|+||.
T Consensus 331 ~~~~~~~~l~~~~~~~~~~~g~I~Vd~~lq~~~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ni~ 397 (502)
T 4g6h_A 331 KARPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFD 397 (502)
T ss_dssp ECCHHHHHHHHHSGGGTTCCSSEEBCTTSBBTTCSSEEECGGGEESSSCCCHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHhHHHhccccccCCCceeECCccccCCCCCEEEEEcccCCCCCCchHHHHHHHHHHHHHHH
Confidence 99842110 1344566677899999999998 8999999999984 457899999999999999985
No 63
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=1.9e-33 Score=282.36 Aligned_cols=275 Identities=11% Similarity=0.033 Sum_probs=198.0
Q ss_pred eEEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHH
Q psy14461 87 AVLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKR 166 (535)
Q Consensus 87 ~~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (535)
+.+||+|||+||+|++||+++.+.+.+|+|||++..-+......+.+ . ....+.+.++.+...
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~----~------------~~~~~~~~~~~~~~~- 67 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGF----I------------TRDGIKPEEFKEIGL- 67 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCS----T------------TCTTBCHHHHHHHHH-
T ss_pred CCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCc----c------------CCCCCCHHHHHHHHH-
Confidence 34899999999999999999888899999999975321111111111 0 011234444443222
Q ss_pred HHHHHHHHHHHHHHhcCcEEEEeEEEEe---cC--CEEEEce-eEEEcceEEEeeCceecC-CCCC------Cceechhh
Q psy14461 167 FCIRAKNDSMRELKALGIDIVRTAAAFT---NP--HTIKLSN-RSVTGFNFLLAVERRCLP-EPRN------SALISADD 233 (535)
Q Consensus 167 ~~~~~~~~~~~~~~~~gV~~~~g~~~~~---~~--~~v~~~~-~~~~~d~lViATGs~p~~-~i~G------~~v~~~~~ 233 (535)
.+..+..++.++.+++... +. +++.+.+ .++.||+||||||++|+. ++|| ..+++...
T Consensus 68 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~~p~i~G~~~~~~~~v~~~~~ 138 (304)
T 4fk1_A 68 ---------NEVMKYPSVHYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQEEFPSIPNVREYYGKSLFSCPY 138 (304)
T ss_dssp ---------HHHTTSTTEEEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEEECCSCTTHHHHBTTTEESCHH
T ss_pred ---------HHHHhcCCEEEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCccccccccCccccccceeeeccc
Confidence 1222334567766665442 22 2455543 789999999999999999 9999 23555554
Q ss_pred HHhccCCCCcEEEECCCh-HHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeC
Q psy14461 234 LFRLGAWPGKTLVLGGSL-MAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVISSF 310 (535)
Q Consensus 234 ~~~~~~~~k~vvViGgG~-~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~ 310 (535)
.......+++++|||||. +++|+|..+++.+.+|+++.+ +.+. +.+.+.|+++|+.+ .+. ++.+..+
T Consensus 139 ~~~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~~--------~~~~~~l~~~g~~~~~~~-v~~~~~~- 208 (304)
T 4fk1_A 139 CDGWELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNELS--------QTIMDELSNKNIPVITES-IRTLQGE- 208 (304)
T ss_dssp HHSGGGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCCC--------HHHHHHHHTTTCCEECSC-EEEEESG-
T ss_pred cchhHhcCCceeeecCCCchhhhHHHHHHhCCceEEEEeccccch--------hhhhhhhhccceeEeeee-EEEeecC-
Confidence 444444567888888886 568899999999999999988 5443 23456677889999 654 7777765
Q ss_pred CCcE-EEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCCCCCcH
Q psy14461 311 DGMK-GVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNA 389 (535)
Q Consensus 311 ~~~~-~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~~~~~ 389 (535)
++.+ .|++ .+|+ ++++|.++++.|.+|++.++ +.+|++++++|+|.||+++|||+|||||+|||+...+.++
T Consensus 209 ~~~~~~v~~---~~g~--~i~~~~~vi~~g~~~~~~~~--~~~g~~~~~~G~I~vd~~~~Ts~p~IyA~GDv~~~~~~~~ 281 (304)
T 4fk1_A 209 GGYLKKVEF---HSGL--RIERAGGFIVPTFFRPNQFI--EQLGCELQSNGTFVIDDFGRTSEKNIYLAGETTTQGPSSL 281 (304)
T ss_dssp GGCCCEEEE---TTSC--EECCCEEEECCEEECSSCHH--HHTTCCCCTTSSSCSSTTCBCSSTTEEECSHHHHTSCCCH
T ss_pred CCeeeeeec---cccc--eeeecceeeeeccccCChhh--hhcCeEECCCCCEEECcCCccCCCCEEEEeccCCCcchHH
Confidence 3333 4666 3777 89999999988888777765 7889999999999999999999999999999983345678
Q ss_pred HHHHHHHHHHHHHHh
Q psy14461 390 SMAAISARLIIERLY 404 (535)
Q Consensus 390 ~~A~~~g~~aa~~i~ 404 (535)
..|+.||++||.+|.
T Consensus 282 ~~A~~~G~~AA~~i~ 296 (304)
T 4fk1_A 282 IIAASQGNKAAIAIN 296 (304)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 899999999999884
No 64
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=100.00 E-value=2.1e-35 Score=340.86 Aligned_cols=351 Identities=13% Similarity=0.078 Sum_probs=248.1
Q ss_pred CCCCChhHHHH------------hhhcCCcEEEEeCCCchh--hHHHH----------------HHHHHh----cC----
Q psy14461 42 PSFETPPAYIS------------RLSYENRILIFTHAVLRE--ENARA----------------ERYLNA----RG---- 83 (535)
Q Consensus 42 p~~~~l~~~~~------------~~i~~~~v~v~~k~~cp~--~~~~~----------------k~~~~~----~~---- 83 (535)
|..++++.|+. .+.++|++..++.+.||+ .|..+ +++..+ .+
T Consensus 92 P~~~~ip~~~~~~~~g~~~~A~~~~~~~n~~p~~~grvCp~~~~Ce~~C~~~~~~~~pv~I~~le~~~~d~~~~~~~~~~ 171 (1025)
T 1gte_A 92 PTHLDIKSFITSISNKNYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGSINIGGLQQFASEVFKAMNIPQI 171 (1025)
T ss_dssp TTCCCHHHHHHHHHTTCHHHHHHHHHHHCTTHHHHHHHCCGGGSGGGGCGGGGSTTCCCCHHHHHHHHHHHHHHHTCCCC
T ss_pred CCCCCHHHHHHHHHCCCHHHHHHHHHhcCChhHhhcCCCCChhhHHhhCccCCCCCCCccHhHHHHHHHHHHHHhCCccc
Confidence 67777777744 456778888888889995 56532 111111 11
Q ss_pred --Cc---------ceEEEEEeeCCccHHHHHHHHHhhCCC-eEEEEecCCcccccc-cccccccccccchhhcccccccc
Q psy14461 84 --DR---------FAVLYLDRIGDEGILLEEELKRQTNQR-RDELQERGSHLSFRK-KRRLYYPVAMSDLELEQDSTSAL 150 (535)
Q Consensus 84 --~~---------~~~~~v~iiG~G~aG~~~al~~~~~~~-~V~lie~~~~~~~~~-~~l~~~~~~i~~~~~~~~~~~~~ 150 (535)
.. ..-.+|+|||+|++|+++|..+...+. +|+|||+.+.+++.. .++|.+
T Consensus 172 ~~p~~~~~~~~~~~~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~ip~~----------------- 234 (1025)
T 1gte_A 172 RNPCLPSQEKMPEAYSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQF----------------- 234 (1025)
T ss_dssp CCTTSCCGGGSCGGGGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHTSCTT-----------------
T ss_pred cCccccccccCCccCCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccccCCcc-----------------
Confidence 10 113579999999999999998888888 799999988664431 112221
Q ss_pred cccccCHHHHHHHHHHHHHHHHHHHHHHHHhcCcEEEEeEEEEecCCEEEEce-eEEEcceEEEeeCc-eecC-CC-CC-
Q psy14461 151 NVTIRNWNAATKLIKRFCIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLSN-RSVTGFNFLLAVER-RCLP-EP-RN- 225 (535)
Q Consensus 151 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~~-~~~~~d~lViATGs-~p~~-~i-~G- 225 (535)
.... ++.++. .+++++.||+++.++.. ..+++++++ .++.||+||||||+ +|+. ++ +|
T Consensus 235 ---~~~~-~~~~~~-----------~~~~~~~gv~~~~~~~v--~~~~v~~~~~~~~~~d~vvlAtGa~~p~~l~~~~G~ 297 (1025)
T 1gte_A 235 ---RLPY-DVVNFE-----------IELMKDLGVKIICGKSL--SENEITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGL 297 (1025)
T ss_dssp ---TSCH-HHHHHH-----------HHHHHTTTCEEEESCCB--STTSBCHHHHHHTTCCEEEECCCCCEECCCGGGTTC
T ss_pred ---cCCH-HHHHHH-----------HHHHHHCCcEEEcccEe--ccceEEhhhcCccCCCEEEEecCCCCCCCCCCCCCC
Confidence 0111 122221 25677789999998753 224455544 45789999999999 6887 54 44
Q ss_pred ---CceechhhHHhc----------------cCCCCcEEEECCChHHHHHHHHHHhCCC-cEEEEEc-C-cCCccCcHHH
Q psy14461 226 ---SALISADDLFRL----------------GAWPGKTLVLGGSLMAVEIAATLNFLGV-PVTLVYS-R-RLLKHFDQEM 283 (535)
Q Consensus 226 ---~~v~~~~~~~~~----------------~~~~k~vvViGgG~~g~e~A~~l~~~g~-~Vtlv~~-~-~~l~~~~~~~ 283 (535)
++++++.+++.. ...+++|+|||||++|+|+|..++++|. +||++++ + ..++.+++++
T Consensus 298 ~~~~gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~~~~e~ 377 (1025)
T 1gte_A 298 TQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRAVPEEV 377 (1025)
T ss_dssp CTTTTEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCCSCHHHH
T ss_pred CCCCCEEEhHHHHHHHHhhcccccccccccccccCCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCCCCHHHH
Confidence 468888877641 2346799999999999999999999996 8999999 6 5667777665
Q ss_pred HHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEE-EEEec---CCC-------CCceEEEcCEEEEccCCCCCCCCCCccc
Q psy14461 284 VRILLSSLTKAGVSI-QCCVIEKVISSFDGMKG-VRGFH---PES-------KEPFADVFKTVVNAMEKKFDFAALNLHH 351 (535)
Q Consensus 284 ~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~-v~~~~---~~~-------G~~~~~~~D~vi~a~G~~p~~~~l~l~~ 351 (535)
+.++++||++ ++..++++..+ ++++. |++.. ..+ |+++++++|.||+|+|++|+...+..+.
T Consensus 378 -----~~~~~~Gv~~~~~~~~~~i~~~-~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~ 451 (1025)
T 1gte_A 378 -----ELAKEEKCEFLPFLSPRKVIVK-GGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEAL 451 (1025)
T ss_dssp -----HHHHHTTCEEECSEEEEEEEEE-TTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHT
T ss_pred -----HHHHHcCCEEEeCCCceEEEcc-CCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcc
Confidence 3566789999 99999999865 45442 44421 012 3345799999999999987543331223
Q ss_pred cCeeecCCCceEcCC-CCCcCCCCEEEeCCcCCCCCCcHHHHHHHHHHHHHHHhCCCC--CCCCCCCCcEEEEcCCceee
Q psy14461 352 IGVDIKKKSYVVCNE-KDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYGMQD--QLMDYSFLPVVVRGDVEFGT 428 (535)
Q Consensus 352 ~gl~~~~~G~i~vd~-~~~T~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~~~--~~~~~~~~p~~~~~~~~~a~ 428 (535)
.|++++++|+|.||+ +++|+.|+|||+|||+ +.+.+++.|+.||+.||.+|.+... ...++..+|...|+.|+++.
T Consensus 452 ~gl~~~~~G~I~vd~~~~~Ts~~~VfA~GD~~-~~~~~~~~A~~~G~~aA~~i~~~L~~~~~~~~~~~~~~p~~~~ev~~ 530 (1025)
T 1gte_A 452 SPIKFNRWDLPEVDPETMQTSEPWVFAGGDIV-GMANTTVESVNDGKQASWYIHKYIQAQYGASVSAKPELPLFYTPVDL 530 (1025)
T ss_dssp TTSCBCTTSSBCCCTTTCBCSSTTEEECSGGG-CSCCCHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCCBCCCCCGGGG
T ss_pred cCceECCCCCEEECCCCCccCCCCEEEeCCCC-CCchHHHHHHHHHHHHHHHHHHHHHhccCCCcccCcCcccccccccc
Confidence 588899999999997 8999999999999999 7889999999999999999984210 11234456667777777766
Q ss_pred ecCCH
Q psy14461 429 VGMSE 433 (535)
Q Consensus 429 vG~te 433 (535)
++++.
T Consensus 531 v~ls~ 535 (1025)
T 1gte_A 531 VDISV 535 (1025)
T ss_dssp CCCCE
T ss_pred cccee
Confidence 66543
No 65
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=2.5e-32 Score=275.55 Aligned_cols=285 Identities=13% Similarity=0.047 Sum_probs=211.3
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHH
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRF 167 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (535)
.++|+|||+|++|+.+|+.+...+.+|+|||+.. ++.. ..+ ......++++ ...+....+..+.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~----~~~----~~~~~~~~~~----~~~~~~~~~~~~~--- 68 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGME-KGGQ----LTT----TTEVENWPGD----PNDLTGPLLMERM--- 68 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS-TTGG----GGG----CSBCCCSTTC----CSSCBHHHHHHHH---
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCC-CCce----Eec----chhhhhCCCC----CCCCCHHHHHHHH---
Confidence 4789999999999999999888889999999753 2111 110 0000001111 0112333333332
Q ss_pred HHHHHHHHHHHHHhcCcEEEEeEEEEec--CCEEE-E-ceeEEEcceEEEeeCceecC-CCCC-C-----ceechhhHHh
Q psy14461 168 CIRAKNDSMRELKALGIDIVRTAAAFTN--PHTIK-L-SNRSVTGFNFLLAVERRCLP-EPRN-S-----ALISADDLFR 236 (535)
Q Consensus 168 ~~~~~~~~~~~~~~~gV~~~~g~~~~~~--~~~v~-~-~~~~~~~d~lViATGs~p~~-~i~G-~-----~v~~~~~~~~ 236 (535)
...++..+++++.+++..++ .+.+. + ++.++.||+||+|||++|.. ++|| + .+++......
T Consensus 69 --------~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~ 140 (320)
T 1trb_A 69 --------HEHATKFETEIIFDHINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATSDG 140 (320)
T ss_dssp --------HHHHHHTTCEEECCCEEEEECSSSSEEEEESSCEEEEEEEEECCCEEECCCCCHHHHHTBTTTEESCHHHHG
T ss_pred --------HHHHHHCCCEEEEeeeeEEEecCCEEEEEeCCCEEEcCEEEECCCCCcCCCCCCChHHhCCceeEecccCCc
Confidence 24556779999988866654 23333 2 33689999999999999988 8887 2 2333333222
Q ss_pred ccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcE
Q psy14461 237 LGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMK 314 (535)
Q Consensus 237 ~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~ 314 (535)
....+++|+|||+|++|+|+|..|++.|.+|+++++ +.+. .++.+.+.+.+.+++.||++ +++++++++.+ ++++
T Consensus 141 ~~~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~v 217 (320)
T 1trb_A 141 FFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR--AEKILIKRLMDKVENGNIILHTNRTLEEVTGD-QMGV 217 (320)
T ss_dssp GGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC--CCHHHHHHHHHHHHTSSEEEECSCEEEEEEEC-SSSE
T ss_pred cccCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc--cCHHHHHHHHHhcccCCeEEEcCceeEEEEcC-CCce
Confidence 234578999999999999999999999999999999 6654 36778888888899999999 99999999876 3343
Q ss_pred -EEEEecCCC-CCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCC-----CcCCCCEEEeCCcCCCC-C
Q psy14461 315 -GVRGFHPES-KEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKD-----QTSVGNIFAVGGIVHGK-P 386 (535)
Q Consensus 315 -~v~~~~~~~-G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~-----~T~~~~IyA~GD~~~~~-~ 386 (535)
.|++.+..+ |+..++++|.|++|+|++|+++++ + .+++++ +|+|.||+++ +|+.|+|||+|||+ +. +
T Consensus 218 ~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~~--~-~~l~~~-~G~i~vd~~~~~~~~~t~~~~vya~GD~~-~~~~ 292 (320)
T 1trb_A 218 TGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIF--E-GQLELE-NGYIKVQSGIHGNATQTSIPGVFAAGDVM-DHIY 292 (320)
T ss_dssp EEEEEECCTTCCCCEEEECSEEEECSCEEESCGGG--T-TTSCEE-TTEECCCCSSSSCTTBCSSTTEEECGGGG-CSSS
T ss_pred EEEEEEeccCCCceEEEEcCEEEEEeCCCCChHHh--c-cccccc-CceEEECCCcccccccCCCCCEEEccccc-CCcc
Confidence 366653112 655689999999999999999876 3 467788 8999999987 89999999999999 54 5
Q ss_pred CcHHHHHHHHHHHHHHHh
Q psy14461 387 NNASMAAISARLIIERLY 404 (535)
Q Consensus 387 ~~~~~A~~~g~~aa~~i~ 404 (535)
..+..|+.||+.||.+|.
T Consensus 293 ~~~~~A~~~g~~aa~~i~ 310 (320)
T 1trb_A 293 RQAITSAGTGCMAALDAE 310 (320)
T ss_dssp CCHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhccHHHHHHHHH
Confidence 788999999999999996
No 66
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=4.5e-33 Score=277.41 Aligned_cols=269 Identities=15% Similarity=0.099 Sum_probs=203.8
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRFC 168 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 168 (535)
++|+|||+|++|+.+|..+...+.+|+|||+++.....+.....+ .+ ....+..++..+..
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~----~~------------~~~~~~~~~~~~~~--- 63 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGF----LG------------QDGKAPGEIIAEAR--- 63 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSS----TT------------CTTCCHHHHHHHHH---
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCC----cC------------CCCCCHHHHHHHHH---
Confidence 578999999999999999888889999999976332111111111 10 11234444444333
Q ss_pred HHHHHHHHHHHHhc-CcEEEEeEEEEecC----CEEEEce-eEEEcceEEEeeCceecC-CCCC-C-----ceechhhHH
Q psy14461 169 IRAKNDSMRELKAL-GIDIVRTAAAFTNP----HTIKLSN-RSVTGFNFLLAVERRCLP-EPRN-S-----ALISADDLF 235 (535)
Q Consensus 169 ~~~~~~~~~~~~~~-gV~~~~g~~~~~~~----~~v~~~~-~~~~~d~lViATGs~p~~-~i~G-~-----~v~~~~~~~ 235 (535)
..+++. +++++.+++..++. ..+.+.+ .++.||+||+|||++|.. ++|| . .+++.....
T Consensus 64 --------~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~ 135 (297)
T 3fbs_A 64 --------RQIERYPTIHWVEGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDELPEIAGLRERWGSAVFHCPYCH 135 (297)
T ss_dssp --------HHHTTCTTEEEEESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEECCCCBTTGGGBTTTEESCHHHH
T ss_pred --------HHHHhcCCeEEEEeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCCCCCCCCchhhcCCeeEEcccCc
Confidence 445555 79988887766542 2555544 679999999999999988 8888 2 334443222
Q ss_pred hccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCc
Q psy14461 236 RLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGM 313 (535)
Q Consensus 236 ~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~ 313 (535)
.....+++++|||+|++|+|+|..|++.| +|+++++ +. .+++ .+.+.+++.||++ . +.+++++.+ +
T Consensus 136 ~~~~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~---~~~~----~~~~~l~~~gv~i~~-~~v~~i~~~--~- 203 (297)
T 3fbs_A 136 GYELDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV---EPDA----DQHALLAARGVRVET-TRIREIAGH--A- 203 (297)
T ss_dssp TGGGTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC---CCCH----HHHHHHHHTTCEEEC-SCEEEEETT--E-
T ss_pred chhhcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC---CCCH----HHHHHHHHCCcEEEc-ceeeeeecC--C-
Confidence 33345799999999999999999999999 9999998 54 2233 4566778889999 6 889998753 2
Q ss_pred EEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeec--CCC-ceEcCCCCCcCCCCEEEeCCcCCCCCCcHH
Q psy14461 314 KGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIK--KKS-YVVCNEKDQTSVGNIFAVGGIVHGKPNNAS 390 (535)
Q Consensus 314 ~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~--~~G-~i~vd~~~~T~~~~IyA~GD~~~~~~~~~~ 390 (535)
.|++. +|+ ++++|.|++++|++|+++++ +.++++++ ++| ++.||++++|+.|+|||+|||+ +.+++++
T Consensus 204 -~v~~~---~g~--~~~~D~vi~a~G~~p~~~~~--~~~g~~~~~~~~G~~i~vd~~~~t~~~~vya~GD~~-~~~~~~~ 274 (297)
T 3fbs_A 204 -DVVLA---DGR--SIALAGLFTQPKLRITVDWI--EKLGCAVEEGPMGSTIVTDPMKQTTARGIFACGDVA-RPAGSVA 274 (297)
T ss_dssp -EEEET---TSC--EEEESEEEECCEEECCCSCH--HHHTCCEEEETTEEEECCCTTCBCSSTTEEECSGGG-CTTCCHH
T ss_pred -eEEeC---CCC--EEEEEEEEEccCcccCchhH--HhcCCccccCCCCceEEeCCCCccCCCCEEEEeecC-CchHHHH
Confidence 56663 777 89999999999999999875 77777776 457 8999999999999999999999 7799999
Q ss_pred HHHHHHHHHHHHHhC
Q psy14461 391 MAAISARLIIERLYG 405 (535)
Q Consensus 391 ~A~~~g~~aa~~i~g 405 (535)
.|+.||+.||.||..
T Consensus 275 ~A~~~g~~aa~~i~~ 289 (297)
T 3fbs_A 275 LAVGDGAMAGAAAHR 289 (297)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHH
Confidence 999999999999863
No 67
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.3e-32 Score=274.42 Aligned_cols=283 Identities=15% Similarity=0.055 Sum_probs=204.6
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHH
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRF 167 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (535)
.++|+|||+|++|+.+|+.+...+.+|+|||+.. ++.. ..+ ......++++ ...++..++..+.
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~----~~~----~~~~~~~~~~----~~~~~~~~~~~~l--- 77 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-FGGA----LMT----TTDVENYPGF----RNGITGPELMDEM--- 77 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-CSCG----GGS----CSCBCCSTTC----TTCBCHHHHHHHH---
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CCCc----eec----cchhhhcCCC----CCCCCHHHHHHHH---
Confidence 3689999999999999998888899999999753 2111 110 0000001111 0112334443333
Q ss_pred HHHHHHHHHHHHHhcCcEEEEeEEEEecC---CEE-EEce-eEEEcceEEEeeCceecC-CCCC-C-----ceechhhHH
Q psy14461 168 CIRAKNDSMRELKALGIDIVRTAAAFTNP---HTI-KLSN-RSVTGFNFLLAVERRCLP-EPRN-S-----ALISADDLF 235 (535)
Q Consensus 168 ~~~~~~~~~~~~~~~gV~~~~g~~~~~~~---~~v-~~~~-~~~~~d~lViATGs~p~~-~i~G-~-----~v~~~~~~~ 235 (535)
...+++.+++++.+++..++. .++ .+.+ .++.||+||+|||++|.. ++|| . .+++.....
T Consensus 78 --------~~~~~~~~v~~~~~~v~~i~~~~~~~v~~~~~g~~~~~d~lviAtG~~~~~~~i~g~~~~~~~~~~~~~~~~ 149 (335)
T 2a87_A 78 --------REQALRFGADLRMEDVESVSLHGPLKSVVTADGQTHRARAVILAMGAAARYLQVPGEQELLGRGVSSCATCD 149 (335)
T ss_dssp --------HHHHHHTTCEEECCCEEEEECSSSSEEEEETTSCEEEEEEEEECCCEEECCCCCTHHHHTBTTTEESCHHHH
T ss_pred --------HHHHHHcCCEEEEeeEEEEEeCCcEEEEEeCCCCEEEeCEEEECCCCCccCCCCCchHhccCCceEEeeccc
Confidence 244566799998887655442 356 5543 689999999999999988 8888 2 243333333
Q ss_pred hccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCc
Q psy14461 236 RLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGM 313 (535)
Q Consensus 236 ~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~ 313 (535)
.....+++|+|||+|++|+|+|..|++.|.+|+++++ +.+.. .+.+. .+.+++.||++ +++++++++.+ ++.
T Consensus 150 ~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~--~~~~~---~~~~~~~gV~v~~~~~v~~i~~~-~~~ 223 (335)
T 2a87_A 150 GFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA--SKIML---DRARNNDKIRFLTNHTVVAVDGD-TTV 223 (335)
T ss_dssp GGGGTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS--CTTHH---HHHHHCTTEEEECSEEEEEEECS-SSC
T ss_pred hhhcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc--cHHHH---HHHhccCCcEEEeCceeEEEecC-CcE
Confidence 2234579999999999999999999999999999999 76543 22221 23456789999 99999999865 232
Q ss_pred EEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCC-CCcCCCCEEEeCCcCCCC-CCcHHH
Q psy14461 314 KGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEK-DQTSVGNIFAVGGIVHGK-PNNASM 391 (535)
Q Consensus 314 ~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~-~~T~~~~IyA~GD~~~~~-~~~~~~ 391 (535)
..|.+.+..+|+..++++|.|++|+|++|+++++ + .+++++++|+|.||++ ++|+.|+|||+|||+ +. +..+..
T Consensus 224 ~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~--~-~~l~~~~~G~i~vd~~~~~t~~~~iya~GD~~-~~~~~~~~~ 299 (335)
T 2a87_A 224 TGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLV--R-EAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLV-DRTYRQAVT 299 (335)
T ss_dssp CEEEEEEETTSCCEEECCSCEEECSCEEECCTTT--B-TTBCBCTTSCBCCSTTSSBCSSTTEEECGGGT-CCSCCCHHH
T ss_pred eEEEEEEcCCCceEEeecCEEEEccCCccChhHh--h-cccccCCCccEEeCCCCCccCCCCEEEeeecC-CccHHHHHH
Confidence 3455543235655589999999999999999887 3 4688888999999986 689999999999999 54 578899
Q ss_pred HHHHHHHHHHHHh
Q psy14461 392 AAISARLIIERLY 404 (535)
Q Consensus 392 A~~~g~~aa~~i~ 404 (535)
|+.||+.||.||.
T Consensus 300 A~~~g~~aA~~i~ 312 (335)
T 2a87_A 300 AAGSGCAAAIDAE 312 (335)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHH
Confidence 9999999999996
No 68
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=1.1e-31 Score=272.44 Aligned_cols=286 Identities=14% Similarity=0.054 Sum_probs=204.4
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEec----CCcccccccccccccccccchhhcccccccccccccCHHHHHHH
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQER----GSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKL 163 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~----~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~ 163 (535)
.++|+|||+|++|+.+|+.+...+.+|+|||+ ....+. .... ......++++. ..++...+..+
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg----~~~~----~~~~~~~~~~~----~~~~~~~~~~~ 75 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGG----QLTT----TTDVENFPGFP----EGILGVELTDK 75 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTC----GGGG----CSEECCSTTCT----TCEEHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCc----eeee----ccccccCCCCc----cCCCHHHHHHH
Confidence 47899999999999999988888999999998 222211 1110 00000011110 01223333332
Q ss_pred HHHHHHHHHHHHHHHHHhcCcEEEEeEEEEec--CC--EEEEceeEEEcceEEEeeCceecC-CCCC-Cc---------e
Q psy14461 164 IKRFCIRAKNDSMRELKALGIDIVRTAAAFTN--PH--TIKLSNRSVTGFNFLLAVERRCLP-EPRN-SA---------L 228 (535)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~--~~--~v~~~~~~~~~d~lViATGs~p~~-~i~G-~~---------v 228 (535)
. ...++..|++++.+++..++ .+ +|.+++.++.||+||+|||++|.. ++|| +. +
T Consensus 76 l-----------~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~vv~A~G~~~~~~~~~g~~~~~~~~~~~~~ 144 (333)
T 1vdc_A 76 F-----------RKQSERFGTTIFTETVTKVDFSSKPFKLFTDSKAILADAVILAIGAVAKRLSFVGSGEVLGGFWNRGI 144 (333)
T ss_dssp H-----------HHHHHHTTCEEECCCCCEEECSSSSEEEECSSEEEEEEEEEECCCEEECCCCCBTCSSSSSCCBTTTE
T ss_pred H-----------HHHHHHCCCEEEEeEEEEEEEcCCEEEEEECCcEEEcCEEEECCCCCcCCCCCCCccccccccccCcE
Confidence 2 34556679999888755443 22 455545789999999999999988 8888 22 2
Q ss_pred echhhHHhcc--CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEE
Q psy14461 229 ISADDLFRLG--AWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIE 304 (535)
Q Consensus 229 ~~~~~~~~~~--~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~ 304 (535)
++........ ..+++|+|||+|++|+|+|..|++.|.+|+++++ +.+.. .+.+ ..+.+++.||++ ++++++
T Consensus 145 ~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~--~~~~---~~~~~~~~gv~i~~~~~v~ 219 (333)
T 1vdc_A 145 SACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA--SKIM---QQRALSNPKIDVIWNSSVV 219 (333)
T ss_dssp ESCHHHHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS--CHHH---HHHHHTCTTEEEECSEEEE
T ss_pred EEeccCccchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc--cHHH---HHHHHhCCCeeEecCCceE
Confidence 2222222222 4578999999999999999999999999999999 66533 2222 224456789999 999999
Q ss_pred EEEEeCCC-cE-EEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCC-CCcCCCCEEEeCCc
Q psy14461 305 KVISSFDG-MK-GVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEK-DQTSVGNIFAVGGI 381 (535)
Q Consensus 305 ~i~~~~~~-~~-~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~-~~T~~~~IyA~GD~ 381 (535)
+++.++++ ++ .|++.+..+|+..++++|.|++|+|++|+++++ + .+++++++|+|.||++ ++|+.|+|||+|||
T Consensus 220 ~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~--~-~~l~~~~~G~i~vd~~~~~t~~~~vya~GD~ 296 (333)
T 1vdc_A 220 EAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFL--D-GGVELDSDGYVVTKPGTTQTSVPGVFAAGDV 296 (333)
T ss_dssp EEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGG--T-TSSCBCTTSCBCCCTTSCBCSSTTEEECGGG
T ss_pred EEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccchHHh--h-ccccccCCCCEEechhhcccCCCCEEEeeec
Confidence 99875221 43 366653235655689999999999999999876 3 4688888999999987 58999999999999
Q ss_pred CCCC-CCcHHHHHHHHHHHHHHHhC
Q psy14461 382 VHGK-PNNASMAAISARLIIERLYG 405 (535)
Q Consensus 382 ~~~~-~~~~~~A~~~g~~aa~~i~g 405 (535)
+ +. +..+..|+.||+.||.+|..
T Consensus 297 ~-~~~~~~~~~A~~~g~~aa~~i~~ 320 (333)
T 1vdc_A 297 Q-DKKYRQAITAAGTGCMAALDAEH 320 (333)
T ss_dssp G-CSSCCCHHHHHHHHHHHHHHHHH
T ss_pred c-CCCchhHHHHHHhHHHHHHHHHH
Confidence 9 54 57899999999999999963
No 69
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=8.9e-32 Score=273.35 Aligned_cols=288 Identities=13% Similarity=0.056 Sum_probs=210.0
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccc-cccccccccchhhcccccccccccccCHHHHHHHHHH
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKR-RLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKR 166 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~-l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (535)
.++|+|||+|++|+.+|+.+...+.+|+|||+++.+++.... .|... +. ..++ ....++.++..+.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~--~~----~~~~-----~~~~~~~~~~~~l-- 71 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKY--IY----DVAG-----FPKVYAKDLVKGL-- 71 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSE--EC----CSTT-----CSSEEHHHHHHHH--
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCce--ee----ccCC-----CCCCCHHHHHHHH--
Confidence 468999999999999999888888999999998866433211 11000 00 0001 0112333333322
Q ss_pred HHHHHHHHHHHHHHhcCcEEEEe-EEEEec--CCE--EEEce-eEEEcceEEEeeCc---eecC-CCCC-Cc-----eec
Q psy14461 167 FCIRAKNDSMRELKALGIDIVRT-AAAFTN--PHT--IKLSN-RSVTGFNFLLAVER---RCLP-EPRN-SA-----LIS 230 (535)
Q Consensus 167 ~~~~~~~~~~~~~~~~gV~~~~g-~~~~~~--~~~--v~~~~-~~~~~d~lViATGs---~p~~-~i~G-~~-----v~~ 230 (535)
...++..+++++.+ ++..++ ... |.+.+ .++.||+||+|||+ .|.. ++|| +. ++.
T Consensus 72 ---------~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~ 142 (335)
T 2zbw_A 72 ---------VEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYY 142 (335)
T ss_dssp ---------HHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEES
T ss_pred ---------HHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEE
Confidence 24455668888765 343322 223 44433 57999999999999 6777 7887 21 221
Q ss_pred -hhhHHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEE
Q psy14461 231 -ADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVI 307 (535)
Q Consensus 231 -~~~~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~ 307 (535)
..+.. ...+++|+|||+|++|+|+|..|++.|.+|+++++ +.+++ .++..+.+.+.+++.||++ +++.+++++
T Consensus 143 ~~~~~~--~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~--~~~~~~~l~~~l~~~gv~v~~~~~v~~i~ 218 (335)
T 2zbw_A 143 AVKSKA--EFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA--HEASVKELMKAHEEGRLEVLTPYELRRVE 218 (335)
T ss_dssp SCSCGG--GGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS--CHHHHHHHHHHHHTTSSEEETTEEEEEEE
T ss_pred ecCchh--hcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc--cHHHHHHHHhccccCCeEEecCCcceeEc
Confidence 11111 12478999999999999999999999999999999 77655 3567788888899999999 999999998
Q ss_pred EeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCC--CC
Q psy14461 308 SSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVH--GK 385 (535)
Q Consensus 308 ~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~--~~ 385 (535)
.+ ++...|++....+|+..++++|.|++|+|++|+++++ +.++++++ +|+|.||++++|+.|+|||+|||+. +.
T Consensus 219 ~~-~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l--~~~~~~~~-~g~i~vd~~~~t~~~~vya~GD~~~~~~~ 294 (335)
T 2zbw_A 219 GD-ERVRWAVVFHNQTQEELALEVDAVLILAGYITKLGPL--ANWGLALE-KNKIKVDTTMATSIPGVYACGDIVTYPGK 294 (335)
T ss_dssp ES-SSEEEEEEEETTTCCEEEEECSEEEECCCEEEECGGG--GGSCCCEE-TTEEECCTTCBCSSTTEEECSTTEECTTC
T ss_pred cC-CCeeEEEEEECCCCceEEEecCEEEEeecCCCCchHh--hhcceecc-CCeeeeCCCCCCCCCCEEEeccccccCcc
Confidence 74 3333566653236755589999999999999999876 77788877 7899999999999999999999983 24
Q ss_pred CCcHHHHHHHHHHHHHHHhC
Q psy14461 386 PNNASMAAISARLIIERLYG 405 (535)
Q Consensus 386 ~~~~~~A~~~g~~aa~~i~g 405 (535)
+.+++.|..||++||.||.+
T Consensus 295 ~~~~~~A~~~g~~aa~~i~~ 314 (335)
T 2zbw_A 295 LPLIVLGFGEAAIAANHAAA 314 (335)
T ss_dssp CCCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhHHHHHHHHHHHHH
Confidence 67899999999999999974
No 70
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=8.9e-32 Score=272.41 Aligned_cols=284 Identities=14% Similarity=0.106 Sum_probs=209.6
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccc-cccccccccchhhcccccccccccccCHHHHHHHHHH
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKR-RLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKR 166 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~-l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (535)
..+|+|||+|++|+.+|+.+...+.+|+|||+++.+++.... .|... +. +.+++ ...+..++..+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~--~~----~~~~~-----~~~~~~~~~~~~-- 73 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKY--IY----DVAGF-----PKIRAQELINNL-- 73 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSE--EC----CSTTC-----SSEEHHHHHHHH--
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCce--Ee----ccCCC-----CCCCHHHHHHHH--
Confidence 468999999999999999888889999999999876432210 11000 00 01111 112233333332
Q ss_pred HHHHHHHHHHHHHHhcCcEEEEe-EEEEe--cCC---EEEEceeEEEcceEEEeeCc---eecC-CCCC-Cc-----eec
Q psy14461 167 FCIRAKNDSMRELKALGIDIVRT-AAAFT--NPH---TIKLSNRSVTGFNFLLAVER---RCLP-EPRN-SA-----LIS 230 (535)
Q Consensus 167 ~~~~~~~~~~~~~~~~gV~~~~g-~~~~~--~~~---~v~~~~~~~~~d~lViATGs---~p~~-~i~G-~~-----v~~ 230 (535)
...+++.+++++.+ ++..+ +.+ .+.+.+.++.||+||+|||+ .|.. ++|| +. ++.
T Consensus 74 ---------~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~ 144 (332)
T 3lzw_A 74 ---------KEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEETHYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHY 144 (332)
T ss_dssp ---------HHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEEEEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEES
T ss_pred ---------HHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCEEEeCEEEECCCCCcCCCCCCCCCChhhccCceEEE
Confidence 35566678998864 34433 223 56666666999999999999 8988 8888 21 222
Q ss_pred hhhHHhccC-CCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEE
Q psy14461 231 ADDLFRLGA-WPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVI 307 (535)
Q Consensus 231 ~~~~~~~~~-~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~ 307 (535)
.+..... .+++++|||+|.+|+|+|..|++.|.+|+++++ +.+.+ .++. .+.+++.||++ .++.+++++
T Consensus 145 --~~~~~~~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~-~~~~-----~~~l~~~gv~~~~~~~v~~i~ 216 (332)
T 3lzw_A 145 --FVDDLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA-HEHS-----VENLHASKVNVLTPFVPAELI 216 (332)
T ss_dssp --SCSCGGGGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS-CHHH-----HHHHHHSSCEEETTEEEEEEE
T ss_pred --ecCCHHHcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc-cHHH-----HHHHhcCCeEEEeCceeeEEe
Confidence 2222222 368999999999999999999999999999999 76643 2322 23467889999 999999998
Q ss_pred EeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCC--CC
Q psy14461 308 SSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVH--GK 385 (535)
Q Consensus 308 ~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~--~~ 385 (535)
.+ ++...|++.+..+|+..++++|.|++|+|++|+++++ +.+++++ ++|+|.||++++|+.|+|||+|||+. +.
T Consensus 217 ~~-~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~--~~~~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~ 292 (332)
T 3lzw_A 217 GE-DKIEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPI--KNWGLDI-EKNSIVVKSTMETNIEGFFAAGDICTYEGK 292 (332)
T ss_dssp CS-SSCCEEEEEETTSCCEEEEECSEEEECCCEECCCGGG--GGSSCCE-ETTEEECCTTSBCSSTTEEECGGGEECTTC
T ss_pred cC-CceEEEEEEecCCCceEEEECCEEEEeeccCCCchHH--hhcCccc-cCCeEEeCCCCceecCCEEEccceecCCCC
Confidence 75 3445677765345555689999999999999999876 7788888 68999999999999999999999984 35
Q ss_pred CCcHHHHHHHHHHHHHHHhC
Q psy14461 386 PNNASMAAISARLIIERLYG 405 (535)
Q Consensus 386 ~~~~~~A~~~g~~aa~~i~g 405 (535)
++++..|..||+.||.||+.
T Consensus 293 ~~~~~~A~~~g~~aa~~i~~ 312 (332)
T 3lzw_A 293 VNLIASGFGEAPTAVNNAKA 312 (332)
T ss_dssp CCCHHHHHHHHHHHHHHHHH
T ss_pred cceEeeehhhHHHHHHHHHH
Confidence 78999999999999999974
No 71
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.98 E-value=4.5e-31 Score=271.20 Aligned_cols=286 Identities=12% Similarity=0.067 Sum_probs=207.2
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccc-cccccccccchhhcccccccccccccCHHHHHHHHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKR-RLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRF 167 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~-l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (535)
++|+|||+|++|+.+|+.+...+.+|+|||+.+.+++.... .|... +. ..++ ...++..++..+.
T Consensus 15 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~--~~----~~~~-----~~~~~~~~~~~~l--- 80 (360)
T 3ab1_A 15 RDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKH--IY----DVAG-----FPEVPAIDLVESL--- 80 (360)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSE--EC----CSTT-----CSSEEHHHHHHHH---
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcc--cc----cCCC-----CCCCCHHHHHHHH---
Confidence 68999999999999999888889999999998866432211 11000 00 0011 0112333333322
Q ss_pred HHHHHHHHHHHHHhcCcEEEEe-EEEEec--CC---EEEEce-eEEEcceEEEeeCc---eecC-CCCC-C-c-----ee
Q psy14461 168 CIRAKNDSMRELKALGIDIVRT-AAAFTN--PH---TIKLSN-RSVTGFNFLLAVER---RCLP-EPRN-S-A-----LI 229 (535)
Q Consensus 168 ~~~~~~~~~~~~~~~gV~~~~g-~~~~~~--~~---~v~~~~-~~~~~d~lViATGs---~p~~-~i~G-~-~-----v~ 229 (535)
...++..+++++.+ ++..++ .+ +|.+.+ .++.||+||+|||+ .|.. ++|| . . ++
T Consensus 81 --------~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~ 152 (360)
T 3ab1_A 81 --------WAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVY 152 (360)
T ss_dssp --------HHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEE
T ss_pred --------HHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEE
Confidence 24556678888765 343332 22 455543 58999999999999 5555 5665 1 1 22
Q ss_pred c-hhhHHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEE
Q psy14461 230 S-ADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKV 306 (535)
Q Consensus 230 ~-~~~~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i 306 (535)
. ..+.. ...+++|+|||+|++|+|+|..|++.|.+|+++++ +.+.+. ++..+.+.+.+++.||++ .+++++++
T Consensus 153 ~~~~~~~--~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~--~~~~~~l~~~~~~~gv~i~~~~~v~~i 228 (360)
T 3ab1_A 153 YAVKSVE--DFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH--GKTAHEVERARANGTIDVYLETEVASI 228 (360)
T ss_dssp SSCSCGG--GGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC--SHHHHSSHHHHHHTSEEEESSEEEEEE
T ss_pred EecCCHH--HcCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC--HHHHHHHHHHhhcCceEEEcCcCHHHh
Confidence 1 11111 12478999999999999999999999999999999 766553 355667777788899999 99999999
Q ss_pred EEeCCCcE-EEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCC--
Q psy14461 307 ISSFDGMK-GVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVH-- 383 (535)
Q Consensus 307 ~~~~~~~~-~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~-- 383 (535)
+.+ ++++ .|++. ..+|++.++++|.|++|+|++|+++++ +..+++++ +|+|.||++++|+.|+|||+|||+.
T Consensus 229 ~~~-~~~v~~v~~~-~~~g~~~~i~~D~vi~a~G~~p~~~~l--~~~~~~~~-~g~i~vd~~~~t~~~~vya~GD~~~~~ 303 (360)
T 3ab1_A 229 EES-NGVLTRVHLR-SSDGSKWTVEADRLLILIGFKSNLGPL--ARWDLELY-ENALVVDSHMKTSVDGLYAAGDIAYYP 303 (360)
T ss_dssp EEE-TTEEEEEEEE-ETTCCEEEEECSEEEECCCBCCSCGGG--GGSSCCEE-TTEEECCTTSBCSSTTEEECSTTEECT
T ss_pred ccC-CCceEEEEEE-ecCCCeEEEeCCEEEECCCCCCCHHHH--Hhhccccc-cCeeeecCCCcCCCCCEEEecCccCCC
Confidence 876 3543 45554 136755689999999999999999876 67788877 7899999999999999999999983
Q ss_pred CCCCcHHHHHHHHHHHHHHHhC
Q psy14461 384 GKPNNASMAAISARLIIERLYG 405 (535)
Q Consensus 384 ~~~~~~~~A~~~g~~aa~~i~g 405 (535)
+.+++++.|..||++||.||.+
T Consensus 304 ~~~~~~~~A~~~g~~aa~~i~~ 325 (360)
T 3ab1_A 304 GKLKIIQTGLSEATMAVRHSLS 325 (360)
T ss_dssp TCCCSHHHHHHHHHHHHHHHHH
T ss_pred CccceeehhHHHHHHHHHHHHh
Confidence 2467899999999999999975
No 72
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.97 E-value=1.3e-30 Score=275.19 Aligned_cols=279 Identities=16% Similarity=0.133 Sum_probs=205.9
Q ss_pred EEEEeeCCccHHHHHHHHHhh---CCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQT---NQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIK 165 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~---~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 165 (535)
.+|+|||+|++|+.+|..+.. .+.+|+|||+++++.|.+ .++.. ..+ ..+..
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~-~~~~~---~~g--------------~~~~~------- 59 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVP-SNPWV---GVG--------------WKERD------- 59 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGG-GHHHH---HHT--------------SSCHH-------
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccC-Ccccc---ccC--------------ccCHH-------
Confidence 478999999999999987766 789999999999765543 22221 111 11111
Q ss_pred HHHHHHHHHHHHHHHhcCcEEEEeEEEEecC--CEEEEce-eEEEcceEEEeeCceecC-CCCC-C-------ceechhh
Q psy14461 166 RFCIRAKNDSMRELKALGIDIVRTAAAFTNP--HTIKLSN-RSVTGFNFLLAVERRCLP-EPRN-S-------ALISADD 233 (535)
Q Consensus 166 ~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~--~~v~~~~-~~~~~d~lViATGs~p~~-~i~G-~-------~v~~~~~ 233 (535)
++...+...++..||+++.+++..++. ++|++++ .++.||+||||||++|.. ++|| . .+++.++
T Consensus 60 ----~~~~~l~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g~~i~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~~~~ 135 (437)
T 3sx6_A 60 ----DIAFPIRHYVERKGIHFIAQSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLAFENVPGSDPHEGPVQSICTVDH 135 (437)
T ss_dssp ----HHEEECHHHHHTTTCEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCCEECGGGSTTCSTTTSSEECCSSHHH
T ss_pred ----HHHHHHHHHHHHCCCEEEEeEEEEEEcCCCEEEECCCCEEECCEEEECCCCCcCcccCCCCCcccCcceecccccH
Confidence 222334466777899999888877653 5788765 679999999999999998 8998 2 2456666
Q ss_pred HHhccC------CCCcEEEECCChHH------HHHH----HHHHhCCCc-----EEEEEc-CcCC----ccCcHHHHHHH
Q psy14461 234 LFRLGA------WPGKTLVLGGSLMA------VEIA----ATLNFLGVP-----VTLVYS-RRLL----KHFDQEMVRIL 287 (535)
Q Consensus 234 ~~~~~~------~~k~vvViGgG~~g------~e~A----~~l~~~g~~-----Vtlv~~-~~~l----~~~~~~~~~~~ 287 (535)
+..+.+ .+++++|||+|+.| +|+| ..+++.|.+ ||++++ +.+. +.++ +....+
T Consensus 136 a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~l~~~~-~~~~~~ 214 (437)
T 3sx6_A 136 AERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGVG-DSKGIL 214 (437)
T ss_dssp HHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTTTTCCT-THHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccccCcch-HHHHHH
Confidence 654421 13567889986543 7777 667788864 999999 7663 3333 477888
Q ss_pred HHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCC---ceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceE
Q psy14461 288 LSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKE---PFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVV 363 (535)
Q Consensus 288 ~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~---~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~ 363 (535)
++.++++||++ +++.+++|+. +.+.++... .+|+ ..++++|.+++++|++|+.... +..++ .+++|+|.
T Consensus 215 ~~~l~~~gI~~~~~~~v~~v~~---~~v~~~~~~-~~g~~~~~~~i~~D~vv~~~g~~~~~~~~--~~~gl-~~~~G~i~ 287 (437)
T 3sx6_A 215 TKGLKEEGIEAYTNCKVTKVED---NKMYVTQVD-EKGETIKEMVLPVKFGMMIPAFKGVPAVA--GVEGL-CNPGGFVL 287 (437)
T ss_dssp HHHHHHTTCEEECSEEEEEEET---TEEEEEEEC-TTSCEEEEEEEECSEEEEECCEECCHHHH--TSTTT-BCTTSCBC
T ss_pred HHHHHHCCCEEEcCCEEEEEEC---CeEEEEecc-cCCccccceEEEEeEEEEcCCCcCchhhh--ccccc-cCCCCcEE
Confidence 99999999999 9999999974 334443221 2443 3479999999999998876543 33456 57899999
Q ss_pred cCCCCCc-CCCCEEEeCCcCCC-----------CCCcHHHHHHHHHHHHHHHh
Q psy14461 364 CNEKDQT-SVGNIFAVGGIVHG-----------KPNNASMAAISARLIIERLY 404 (535)
Q Consensus 364 vd~~~~T-~~~~IyA~GD~~~~-----------~~~~~~~A~~~g~~aa~~i~ 404 (535)
||+++|| +.|||||+|||+.. .|++++.|..||++||+||.
T Consensus 288 Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~ 340 (437)
T 3sx6_A 288 VDEHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIK 340 (437)
T ss_dssp BCTTSBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred eChhccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 9999999 99999999999841 35789999999999999997
No 73
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.97 E-value=9.8e-31 Score=272.80 Aligned_cols=303 Identities=12% Similarity=0.018 Sum_probs=210.2
Q ss_pred EEEeeCCccHHHHHHH--HHhhCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHH
Q psy14461 90 YLDRIGDEGILLEEEL--KRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRF 167 (535)
Q Consensus 90 ~v~iiG~G~aG~~~al--~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (535)
+|+|||+|++|+.+|. ++...+.+|+|||++++..+. +.++.. +.+. .+.+++
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~-p~~~~v---~~g~--------------~~~~~~------- 58 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTC-YMSNEV---IGGD--------------RELASL------- 58 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECS-TTHHHH---HHTS--------------SCGGGG-------
T ss_pred EEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCc-cCHHHH---hcCC--------------CCHHHH-------
Confidence 4699999999999985 444556799999998865333 222222 1111 011100
Q ss_pred HHHHHHHHHHHHHhcCcEEEEeEEEEec--CCEEEEce-eEEEcceEEEeeCceecC-CCCC--Cc--------eechhh
Q psy14461 168 CIRAKNDSMRELKALGIDIVRTAAAFTN--PHTIKLSN-RSVTGFNFLLAVERRCLP-EPRN--SA--------LISADD 233 (535)
Q Consensus 168 ~~~~~~~~~~~~~~~gV~~~~g~~~~~~--~~~v~~~~-~~~~~d~lViATGs~p~~-~i~G--~~--------v~~~~~ 233 (535)
...+ +.+...||+++.+++..+| .+++.+.+ .++.||+||||||+++.. ++|| +. ..+.++
T Consensus 59 ----~~~~-~~~~~~gv~~i~~~v~~id~~~~~v~~~~g~~i~yd~LviAtG~~~~~~~i~G~~e~~~~~~~~~~~~~~~ 133 (401)
T 3vrd_B 59 ----RVGY-DGLRAHGIQVVHDSALGIDPDKKLVKTAGGAEFAYDRCVVAPGIDLLYDKIEGYSEALAAKLPHAWKAGEQ 133 (401)
T ss_dssp ----EECS-HHHHHTTCEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCEEECGGGSBTCCSGGGGTSCCCSSCSHH
T ss_pred ----hhCH-HHHHHCCCEEEEeEEEEEEccCcEEEecccceeecceeeeccCCccccCCccCchhhcccCccceeccHHH
Confidence 0011 2244579999999988765 46777765 789999999999999998 8888 11 223344
Q ss_pred HHhcc----C-CCCcEEEECCCh-----------HHHHHHHHHHhCC--CcEEEEEc-CcCC--ccCcHHHHHHHHHhhh
Q psy14461 234 LFRLG----A-WPGKTLVLGGSL-----------MAVEIAATLNFLG--VPVTLVYS-RRLL--KHFDQEMVRILLSSLT 292 (535)
Q Consensus 234 ~~~~~----~-~~k~vvViGgG~-----------~g~e~A~~l~~~g--~~Vtlv~~-~~~l--~~~~~~~~~~~~~~l~ 292 (535)
...+. . ...+.+|+++|. .++++|..|++.+ .+|++++. +.+. +.+++.+.+.+.+.++
T Consensus 134 ~~~~~~~l~~~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~ 213 (401)
T 3vrd_B 134 TALLRRQLESMDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQTFSKQAQFTKGWERLYGFGTE 213 (401)
T ss_dssp HHHHHHHHHHSCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSSSCTTHHHHHHHHHHHSCTTST
T ss_pred HHHHHHHHHhcccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhcCCCCEEEEEcccccccccccccHHHHHHHHHHHH
Confidence 43321 1 123344444332 4567777777765 68999988 6653 4677888888888899
Q ss_pred cCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCC-CC-
Q psy14461 293 KAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEK-DQ- 369 (535)
Q Consensus 293 ~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~-~~- 369 (535)
+.||++ ++.++..++.+ .+...+++ .+|+ ++++|++++++|.+|+. ++ +.+++ .+++|+|.||++ +|
T Consensus 214 ~~gi~v~~~~~v~~v~~~-~~~~~v~~---~~g~--~i~~D~vi~~~g~~~~~-~~--~~~gl-~~~~G~i~VD~~tl~~ 283 (401)
T 3vrd_B 214 NALIEWHPGPDAAVVKTD-TEAMTVET---SFGE--TFKAAVINLIPPQRAGK-IA--QSASL-TNDSGWCPVDIRTFES 283 (401)
T ss_dssp TCSEEEECTTTTCEEEEE-TTTTEEEE---TTSC--EEECSEEEECCCEEECH-HH--HHTTC-CCTTSSBCBCTTTCBB
T ss_pred hcCcEEEeCceEEEEEec-ccceEEEc---CCCc--EEEeeEEEEecCcCCch-hH--hhccc-cccCCCEEECCCccee
Confidence 999999 99999888876 34556776 4787 89999999999999984 33 67777 477999999987 55
Q ss_pred cCCCCEEEeCCcCCC--CCCcHHHHHHHHHHHHHHHh----CCCCCCCCCCCCcEEEEcCCceeeecCCH
Q psy14461 370 TSVGNIFAVGGIVHG--KPNNASMAAISARLIIERLY----GMQDQLMDYSFLPVVVRGDVEFGTVGMSE 433 (535)
Q Consensus 370 T~~~~IyA~GD~~~~--~~~~~~~A~~~g~~aa~~i~----g~~~~~~~~~~~p~~~~~~~~~a~vG~te 433 (535)
|+.|||||+|||+.+ .|++++.|.+||+++|+||+ |+++.++.|....++ +..+..+.+.+++
T Consensus 284 t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~~~l~G~~~~~~~y~~~~~~-~~~~~~~~~~~~~ 352 (401)
T 3vrd_B 284 SLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVVALLKGEEPGTPSYLNTCYS-ILAPGYGISIAAV 352 (401)
T ss_dssp SSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHHHHHHTCCCCCCCEEEEEEE-EEETTEEEEEEEE
T ss_pred cCCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCeEEE-EEecCCceEEEEE
Confidence 899999999999842 36799999999999999997 554444444443333 3355566655543
No 74
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.97 E-value=2.3e-30 Score=270.84 Aligned_cols=272 Identities=11% Similarity=0.132 Sum_probs=207.4
Q ss_pred EEEeeCCccHHHHHHHHHhh---CCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHH
Q psy14461 90 YLDRIGDEGILLEEELKRQT---NQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKR 166 (535)
Q Consensus 90 ~v~iiG~G~aG~~~al~~~~---~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (535)
+|+|||+|++|+.+|..+.. .+.+|+|||+++.+.+.+. +++. ..+. .+..+
T Consensus 3 ~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~-~~~~---~~~~--------------~~~~~------- 57 (409)
T 3h8l_A 3 KVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPA-LPHV---AIGV--------------RDVDE------- 57 (409)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCS-SCCC---CSSC--------------CCCCC-------
T ss_pred eEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccc-hhhc---ccCC--------------cCHHH-------
Confidence 68999999999999987776 7899999999997755532 2222 1110 00000
Q ss_pred HHHHHHHHHHHHHHhcCcEEEEeEEEEec--CCEEEEce-----eEEEcceEEEeeCceecC-CCCC--C---ceechhh
Q psy14461 167 FCIRAKNDSMRELKALGIDIVRTAAAFTN--PHTIKLSN-----RSVTGFNFLLAVERRCLP-EPRN--S---ALISADD 233 (535)
Q Consensus 167 ~~~~~~~~~~~~~~~~gV~~~~g~~~~~~--~~~v~~~~-----~~~~~d~lViATGs~p~~-~i~G--~---~v~~~~~ 233 (535)
+...+...+++.|++++.+++..++ .++|++.+ .++.||+||+|||++|.. ++|| + .+++.++
T Consensus 58 ----~~~~~~~~~~~~gv~~~~~~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~~~~ipG~~~~~~~~~~~~~ 133 (409)
T 3h8l_A 58 ----LKVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEF 133 (409)
T ss_dssp ----EEEEHHHHTGGGTCEEEECEEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEECGGGSBTHHHHCEESSSTTH
T ss_pred ----HHHHHHHHHhhCCeEEEEeeEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCcCccCCCChhhcCcCcCCHHH
Confidence 1112235566789999999877764 44777754 349999999999999988 8998 2 3445555
Q ss_pred HHhcc----CCCCcEEEECCCh-------------------------HHHHHH----HHHHhCCC----cEEEEEc-CcC
Q psy14461 234 LFRLG----AWPGKTLVLGGSL-------------------------MAVEIA----ATLNFLGV----PVTLVYS-RRL 275 (535)
Q Consensus 234 ~~~~~----~~~k~vvViGgG~-------------------------~g~e~A----~~l~~~g~----~Vtlv~~-~~~ 275 (535)
...+. ...++++|||+|. +++|+| ..+++.|. +|+++++ + +
T Consensus 134 ~~~~~~~l~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~-~ 212 (409)
T 3h8l_A 134 ATKLREKLESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGE-Y 212 (409)
T ss_dssp HHHHHHHHHHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEEEEECSSS-S
T ss_pred HHHHHHHHHHhcCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCc-c
Confidence 54432 2336778999991 466766 55667774 8999999 7 7
Q ss_pred CccCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCcccc--
Q psy14461 276 LKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHI-- 352 (535)
Q Consensus 276 l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~-- 352 (535)
++.+++++.+.+.+.+++.||++ ++++|++++.+ .|+++ +|+ ++++|.+++++|++|+. ++ +.+
T Consensus 213 l~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~-----~v~~~---~g~--~~~~D~vi~a~G~~~~~-~l--~~~~~ 279 (409)
T 3h8l_A 213 LSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIREH-----EIVDE---KGN--TIPADITILLPPYTGNP-AL--KNSTP 279 (409)
T ss_dssp STTBCHHHHHHHHHHHHHHTCEEECSCCEEEECSS-----EEEET---TSC--EEECSEEEEECCEECCH-HH--HTSCG
T ss_pred ccccCHHHHHHHHHHHHHCCCEEEcCCceEEECCC-----eEEEC---CCC--EEeeeEEEECCCCCccH-HH--Hhccc
Confidence 88889999999999999999999 99999999743 25663 777 89999999999999985 33 454
Q ss_pred CeeecCCCceEcCCCCCc-CCCCEEEeCCcCC-CCCCcHHHHHHHHHHHHHHHhC
Q psy14461 353 GVDIKKKSYVVCNEKDQT-SVGNIFAVGGIVH-GKPNNASMAAISARLIIERLYG 405 (535)
Q Consensus 353 gl~~~~~G~i~vd~~~~T-~~~~IyA~GD~~~-~~~~~~~~A~~~g~~aa~~i~g 405 (535)
++ .+++|+|.||+++|| +.|||||+|||+. +.+++++.|..||++||+||.+
T Consensus 280 ~l-~~~~G~i~vd~~~~~~~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~ 333 (409)
T 3h8l_A 280 DL-VDDGGFIPTDLNMVSIKYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLAN 333 (409)
T ss_dssp GG-SCTTSCBCBBTTSBBSSCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHH
T ss_pred cC-cCCCCCEEeCcccccCCCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHH
Confidence 44 367899999999999 9999999999994 3578999999999999999975
No 75
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.97 E-value=2.4e-30 Score=272.39 Aligned_cols=280 Identities=13% Similarity=0.069 Sum_probs=198.6
Q ss_pred EEEeeCCccHHHHHHHHHh--hCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHH
Q psy14461 90 YLDRIGDEGILLEEELKRQ--TNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRF 167 (535)
Q Consensus 90 ~v~iiG~G~aG~~~al~~~--~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (535)
+|+|||+|++|+.+|.++. ..+.+|||||+++++.|. +.++.. ..+. .+.+
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~-p~l~~v---~~g~--------------~~~~--------- 56 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT-PAFPHL---AMGW--------------RKFE--------- 56 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG-GGHHHH---HHTC--------------SCGG---------
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccC-ccHHHH---hcCC--------------CCHH---------
Confidence 5799999999999986544 456899999999987775 334333 1111 0111
Q ss_pred HHHHHHHHHHHHHhcCcEEEEeEEEEec--CCEEEEce-eEEEcceEEEeeCceecCCCCC-----CceechhhHHhccC
Q psy14461 168 CIRAKNDSMRELKALGIDIVRTAAAFTN--PHTIKLSN-RSVTGFNFLLAVERRCLPEPRN-----SALISADDLFRLGA 239 (535)
Q Consensus 168 ~~~~~~~~~~~~~~~gV~~~~g~~~~~~--~~~v~~~~-~~~~~d~lViATGs~p~~~i~G-----~~v~~~~~~~~~~~ 239 (535)
++...+...+++.||+++.++++.+| .++|++++ .++.||+||||||+++..++|| ..+.+.+++..+.+
T Consensus 57 --~i~~~~~~~~~~~gv~~i~~~v~~Id~~~~~V~~~~g~~i~YD~LViAtG~~~~~~i~G~~e~~~~~~~~~~a~~~~~ 134 (430)
T 3hyw_A 57 --DISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVFGAEGQEENSTSICTAEHALETQK 134 (430)
T ss_dssp --GSEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEECCSBTHHHHSCCCSSHHHHHHHHH
T ss_pred --HhhhcHHHHHHHCCcEEEEeEEEEEECCCCEEEECCCCEEECCEEEEeCCCCccCCccCcccCcCCcccHHHHHHHHH
Confidence 11112234566789999999988765 57888865 7899999999999987447888 34556676654321
Q ss_pred ------CCCcEEEECCCh------HHHH----HHHHHHhCC----CcEEEEEc-CcCC---ccCcHHHHHHHHHhhhcCC
Q psy14461 240 ------WPGKTLVLGGSL------MAVE----IAATLNFLG----VPVTLVYS-RRLL---KHFDQEMVRILLSSLTKAG 295 (535)
Q Consensus 240 ------~~k~vvViGgG~------~g~e----~A~~l~~~g----~~Vtlv~~-~~~l---~~~~~~~~~~~~~~l~~~g 295 (535)
..+.++|+||+. .+.| ++..++++| .+|++++. +.+. +...+...+.+++.++++|
T Consensus 135 ~l~~~~~~~~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~~G 214 (430)
T 3hyw_A 135 KLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERN 214 (430)
T ss_dssp HHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTT
T ss_pred HHHhhccCCceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccchhhhccchhhHHHHHHHHHHHHhCC
Confidence 134456666553 2233 444566665 47888887 5442 3456777888999999999
Q ss_pred eEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCC-cCCC
Q psy14461 296 VSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQ-TSVG 373 (535)
Q Consensus 296 V~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~-T~~~ 373 (535)
|++ +++.|++++. +.+.++. .+|+.+++++|++++++|.+|+.... .....+..+.+|+|.||++|| |+.|
T Consensus 215 V~~~~~~~v~~v~~---~~~~~~~---~~g~~~~i~~d~vi~~~G~~~~~~~~-~~~~~l~~~~~g~i~vd~~lq~t~~~ 287 (430)
T 3hyw_A 215 IDWIANVAVKAIEP---DKVIYED---LNGNTHEVPAKFTMFMPSFQGPEVVA-SAGDKVANPANKMVIVNRCFQNPTYK 287 (430)
T ss_dssp CEEECSCEEEEECS---SEEEEEC---TTSCEEEEECSEEEEECEEECCHHHH-TTCTTTBCTTTCCBCCCTTSBCSSST
T ss_pred eEEEeCceEEEEeC---CceEEEe---eCCCceEeecceEEEeccCCCchHHH-hcccccccCCceEEEecccccCCCCC
Confidence 999 9999999964 3333332 35666689999999999999985322 112234445678899999999 8999
Q ss_pred CEEEeCCcCC-----------CCCCcHHHHHHHHHHHHHHHhC
Q psy14461 374 NIFAVGGIVH-----------GKPNNASMAAISARLIIERLYG 405 (535)
Q Consensus 374 ~IyA~GD~~~-----------~~~~~~~~A~~~g~~aa~~i~g 405 (535)
||||+|||++ +.|++++.|.+||+++|+||+.
T Consensus 288 ~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~ 330 (430)
T 3hyw_A 288 NIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVN 330 (430)
T ss_dssp TEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHH
Confidence 9999999984 1367888999999999999973
No 76
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.97 E-value=3e-29 Score=258.05 Aligned_cols=310 Identities=11% Similarity=0.043 Sum_probs=199.8
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCC-eEEEEecCCccccccccccccccccc-chhhcccccccccccccCHHHHHHHHH
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQR-RDELQERGSHLSFRKKRRLYYPVAMS-DLELEQDSTSALNVTIRNWNAATKLIK 165 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~-~V~lie~~~~~~~~~~~l~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~l~~~~~ 165 (535)
.++|+|||+|++|+.+|..+...+. +|+|||+++ ++......+.....+. .......+.........++........
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 82 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNE 82 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhccccccccccccc
Confidence 3689999999999999998888888 999999987 3211000000000000 000000000000000011000000000
Q ss_pred HH--HHHHHHHHHHHHHhcCcEEEEeE-EEEec----CCEEEEceeEEEcceEEEeeCceecCCCCCCceechhhHHhcc
Q psy14461 166 RF--CIRAKNDSMRELKALGIDIVRTA-AAFTN----PHTIKLSNRSVTGFNFLLAVERRCLPEPRNSALISADDLFRLG 238 (535)
Q Consensus 166 ~~--~~~~~~~~~~~~~~~gV~~~~g~-~~~~~----~~~v~~~~~~~~~d~lViATGs~p~~~i~G~~v~~~~~~~~~~ 238 (535)
.. ...+...+...++..|++++.++ +..++ ...|.+.+.++.||+||||||+.+...+|+..++++.++....
T Consensus 83 ~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~d~vVlAtG~~~~p~ip~~~~~~~~~~~~~~ 162 (369)
T 3d1c_A 83 EHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTETYHADYIFVATGDYNFPKKPFKYGIHYSEIEDFD 162 (369)
T ss_dssp SSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSCCEEEEEEEECCCSTTSBCCCSSSCEEGGGCSCGG
T ss_pred cCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCCEEEeCEEEECCCCCCccCCCCCceechhhcCChh
Confidence 00 01111222345566799988774 44333 2345554457899999999999754334542344444444433
Q ss_pred C-CCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCc-------cCcHHHHHHHHHhhhcCC-eEE-cceEEEEEE
Q psy14461 239 A-WPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLK-------HFDQEMVRILLSSLTKAG-VSI-QCCVIEKVI 307 (535)
Q Consensus 239 ~-~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~-------~~~~~~~~~~~~~l~~~g-V~i-~~~~v~~i~ 307 (535)
. ..++|+|||+|++|+|+|..|++.|.+||++++ +.+++ .+++...+.+.+.+++.| |++ ++..|++++
T Consensus 163 ~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~ 242 (369)
T 3d1c_A 163 NFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDID 242 (369)
T ss_dssp GSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CTTSCCHHHHHHHHHHHHTTCCEEEECSCCEEEEE
T ss_pred hcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCCcEEEecCcEEEEEE
Confidence 3 346999999999999999999999999999999 77663 255777888999999997 999 999999997
Q ss_pred EeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCC-CCcCCCCEEEeCCcCCCCC
Q psy14461 308 SSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEK-DQTSVGNIFAVGGIVHGKP 386 (535)
Q Consensus 308 ~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~-~~T~~~~IyA~GD~~~~~~ 386 (535)
.+ ++...|++. +|+. ...+|.+++|+|++|+++++ ...+++ +++|++.||++ ++|+.|+|||+|||+. .+
T Consensus 243 ~~-~~~~~v~~~---~g~~-~~~~d~vi~a~G~~~~~~~~--~~~~~~-~~~g~i~v~~~~~~t~~~~v~a~GD~~~-~~ 313 (369)
T 3d1c_A 243 FN-NGQYHISFD---SGQS-VHTPHEPILATGFDATKNPI--VQQLFV-TTNQDIKLTTHDESTRYPNIFMIGATVE-ND 313 (369)
T ss_dssp EE-TTEEEEEES---SSCC-EEESSCCEECCCBCGGGSHH--HHHHSC-CTTSCCCBCTTSBBSSSTTEEECSTTCC-CS
T ss_pred ec-CCceEEEec---CCeE-eccCCceEEeeccCCccchh--hhhhcc-CCCCCEEechhhcccCCCCeEEeccccc-cC
Confidence 65 455667773 6762 33469999999999999766 344566 67899999975 6789999999999983 32
Q ss_pred C----cHHHHHHHHHHHHHHHhCCC
Q psy14461 387 N----NASMAAISARLIIERLYGMQ 407 (535)
Q Consensus 387 ~----~~~~A~~~g~~aa~~i~g~~ 407 (535)
. ....|.+||+.+|++|.+..
T Consensus 314 ~~~~~~~~~~~~~a~~~a~~l~~~~ 338 (369)
T 3d1c_A 314 NAKLCYIYKFRARFAVLAHLLTQRE 338 (369)
T ss_dssp SCCCCSHHHHGGGHHHHHHHHHHHT
T ss_pred CeeEEEEehhhHHHHHHHHHHhccc
Confidence 2 34567889999999998743
No 77
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.96 E-value=4.2e-29 Score=254.93 Aligned_cols=292 Identities=8% Similarity=0.003 Sum_probs=191.7
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccc-cccccccccchhhcccccccc--cccccCHHHHHHHH
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKR-RLYYPVAMSDLELEQDSTSAL--NVTIRNWNAATKLI 164 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~-l~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~l~~~~ 164 (535)
.++|+|||+|++|+.+|..+...+.+|+|||+++.++..... .+......+.....++++... .........+..+.
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYL 82 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHH
Confidence 368999999999999999988889999999999865432110 000000000000111111100 01111223333322
Q ss_pred HHHHHHHHHHHHHHHHhcCcEEEEe-EEEEe--cCCE---EEEceeEEEcceEEEeeC--ceecC-CCCC-C----ceec
Q psy14461 165 KRFCIRAKNDSMRELKALGIDIVRT-AAAFT--NPHT---IKLSNRSVTGFNFLLAVE--RRCLP-EPRN-S----ALIS 230 (535)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~gV~~~~g-~~~~~--~~~~---v~~~~~~~~~d~lViATG--s~p~~-~i~G-~----~v~~ 230 (535)
...++..|++++.+ ++..+ +.+. |++++.++.||+||+||| ++|.. ++|| + ..++
T Consensus 83 -----------~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~ 151 (357)
T 4a9w_A 83 -----------AQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGRQWLARAVISATGTWGEAYTPEYQGLESFAGIQLH 151 (357)
T ss_dssp -----------HHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSCEEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEE
T ss_pred -----------HHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCCEEEeCEEEECCCCCCCCCCCCCCCccccCCcEEE
Confidence 35566678888775 33332 3444 444446899999999999 46666 7888 2 2333
Q ss_pred hhhHHhc-cCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc--CcCCccC--cHHHHHHHHHhhh-------------
Q psy14461 231 ADDLFRL-GAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS--RRLLKHF--DQEMVRILLSSLT------------- 292 (535)
Q Consensus 231 ~~~~~~~-~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~--~~~l~~~--~~~~~~~~~~~l~------------- 292 (535)
..++... ...+++|+|||+|++|+|+|..|++.| +|+++++ +.+++.. ..++.+.+.+.+.
T Consensus 152 ~~~~~~~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (357)
T 4a9w_A 152 SAHYSTPAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGRVLFERATERWKAQQEGREPDLPPG 230 (357)
T ss_dssp GGGCCCSGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTHHHHTC-------------------
T ss_pred eccCCChhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCccHHHHHHHHHhccccccCCCcccc
Confidence 3333322 234689999999999999999999998 6999988 4555532 3444433333332
Q ss_pred ---------------cCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeee
Q psy14461 293 ---------------KAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDI 356 (535)
Q Consensus 293 ---------------~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~ 356 (535)
+.|+ + .+..+.+++.. .+.+ .+|+ ++++|.|++|+|++|+++++ +.++++
T Consensus 231 ~~~~~~~~~~~~~~~~~g~-i~~~~~v~~~~~~-----~v~~---~~g~--~i~~D~vi~a~G~~p~~~~l--~~~gl~- 296 (357)
T 4a9w_A 231 GFGDIVMVPPVLDARARGV-LAAVPPPARFSPT-----GMQW---ADGT--ERAFDAVIWCTGFRPALSHL--KGLDLV- 296 (357)
T ss_dssp ---CBCCCHHHHHHHHTTC-CCEECCCSEEETT-----EEEC---TTSC--EEECSEEEECCCBCCCCGGG--TTTTCB-
T ss_pred cccCcccChhHHHHHhcCc-eEEecCcceEeCC-----eeEE---CCCC--EecCCEEEECCCcCCCCccc--Cccccc-
Confidence 2333 4 44455555432 2555 3777 89999999999999999887 778888
Q ss_pred cCCCceEcCCC--CCcCCCCEEEeC--CcCCCCCCcHHHHHHHHHHHHHHHhC
Q psy14461 357 KKKSYVVCNEK--DQTSVGNIFAVG--GIVHGKPNNASMAAISARLIIERLYG 405 (535)
Q Consensus 357 ~~~G~i~vd~~--~~T~~~~IyA~G--D~~~~~~~~~~~A~~~g~~aa~~i~g 405 (535)
+++|+|.||++ ++|+.|+|||+| ||+...+.....|..||+.||+||..
T Consensus 297 ~~~G~i~vd~~~l~~t~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~ 349 (357)
T 4a9w_A 297 TPQGQVEVDGSGLRALAVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVTA 349 (357)
T ss_dssp CTTSCBCBCTTSCBBSSCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHH
T ss_pred CCCCCccccCCcccCCCCCCeEEeccccccccchhhhhhhHHHHHHHHHHHHH
Confidence 88999999999 899999999999 66622567788899999999999975
No 78
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.96 E-value=2.3e-29 Score=266.65 Aligned_cols=277 Identities=13% Similarity=0.058 Sum_probs=196.2
Q ss_pred EEEEeeCCccHHHHHHHHHhhCC--CeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQ--RRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKR 166 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~--~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (535)
++|+|||+|++|+.+|......+ .+|+|||+++.+.. ++.+ ++.. . ......+..
T Consensus 7 ~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg----~~~~--g~~p------~-------~~~~~~~~~---- 63 (460)
T 1cjc_A 7 PQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFG----LVRF--GVAP------D-------HPEVKNVIN---- 63 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCT----HHHH--TSCT------T-------CGGGGGHHH----
T ss_pred ceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCc----eeec--ccCC------C-------CccHHHHHH----
Confidence 57899999999999998776655 89999999986521 1111 0100 0 000111221
Q ss_pred HHHHHHHHHHHHHHhcCcEEEEeEEEEecCCEEEEceeEEEcceEEEeeCcee-cC-CCCC---CceechhhHHhc----
Q psy14461 167 FCIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLSNRSVTGFNFLLAVERRC-LP-EPRN---SALISADDLFRL---- 237 (535)
Q Consensus 167 ~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~~~~~~~d~lViATGs~p-~~-~i~G---~~v~~~~~~~~~---- 237 (535)
.+...++..||+++.+... .++|++.+..+.||+||||||+.| +. ++|| ++++++.+++.+
T Consensus 64 -------~~~~~~~~~gv~~~~~~~v---~~~V~~~~~~~~~d~lVlAtGs~~~~~~~ipG~~~~gv~~~~~~~~~~~~~ 133 (460)
T 1cjc_A 64 -------TFTQTARSDRCAFYGNVEV---GRDVTVQELQDAYHAVVLSYGAEDHQALDIPGEELPGVFSARAFVGWYNGL 133 (460)
T ss_dssp -------HHHHHHTSTTEEEEBSCCB---TTTBCHHHHHHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTC
T ss_pred -------HHHHHHHhCCcEEEeeeEE---eeEEEeccceEEcCEEEEecCcCCCCCCCCCCCCCCcEEEHHHHHHHhhcC
Confidence 1235567789998876521 344555444578999999999996 66 8998 568888777431
Q ss_pred ------c-C-CCCcEEEECCChHHHHHHHHHH--------------------hCCC-cEEEEEc-CcC------------
Q psy14461 238 ------G-A-WPGKTLVLGGSLMAVEIAATLN--------------------FLGV-PVTLVYS-RRL------------ 275 (535)
Q Consensus 238 ------~-~-~~k~vvViGgG~~g~e~A~~l~--------------------~~g~-~Vtlv~~-~~~------------ 275 (535)
. . .+++|+|||+|++|+|+|..|+ +.|. +|++++| +.+
T Consensus 134 ~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l 213 (460)
T 1cjc_A 134 PENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREM 213 (460)
T ss_dssp GGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHH
T ss_pred ccccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHh
Confidence 1 2 3689999999999999999999 5687 7999998 654
Q ss_pred --CccC-------------------cHH---HHHHHHHhhhc--------------CCeEE-cceEEEEEEEeCCC-cE-
Q psy14461 276 --LKHF-------------------DQE---MVRILLSSLTK--------------AGVSI-QCCVIEKVISSFDG-MK- 314 (535)
Q Consensus 276 --l~~~-------------------~~~---~~~~~~~~l~~--------------~gV~i-~~~~v~~i~~~~~~-~~- 314 (535)
+|.. ++. +.+.+.+.+++ +||++ ++..+.+|..++++ ++
T Consensus 214 ~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~ 293 (460)
T 1cjc_A 214 IQLPGTRPMLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAA 293 (460)
T ss_dssp HTCTTEEEECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEE
T ss_pred hcCCCceeEechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEE
Confidence 2210 110 23334444444 89999 99999999875224 33
Q ss_pred EEEEecC------------CCCCceEEEcCEEEEccCCCCCCCCCCccccCe-eecCCCceEcCCCCCcC-CCCEEEeCC
Q psy14461 315 GVRGFHP------------ESKEPFADVFKTVVNAMEKKFDFAALNLHHIGV-DIKKKSYVVCNEKDQTS-VGNIFAVGG 380 (535)
Q Consensus 315 ~v~~~~~------------~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl-~~~~~G~i~vd~~~~T~-~~~IyA~GD 380 (535)
.|++..+ .+|+..++++|+|++|+|++|++ + .|+ +++++|.|.+|+++||+ .|+|||+||
T Consensus 294 ~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~-l-----~gl~~~d~~g~i~vn~~~rt~~~p~vya~Gd 367 (460)
T 1cjc_A 294 GIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRP-I-----DPSVPFDPKLGVVPNMEGRVVDVPGLYCSGW 367 (460)
T ss_dssp EEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCC-C-----CTTSCCBTTTTBCCEETTEETTCTTEEECTH
T ss_pred EEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCC-C-----CCCcccccCCCeeECCCCcCcCCCCEEEEEe
Confidence 2444310 03544589999999999999997 2 356 77888899999999998 799999999
Q ss_pred cCCCCCC-cHHHHHHHHHHHHHHHhC
Q psy14461 381 IVHGKPN-NASMAAISARLIIERLYG 405 (535)
Q Consensus 381 ~~~~~~~-~~~~A~~~g~~aa~~i~g 405 (535)
|+ .+|. .+..|+.+|+.+|.+|++
T Consensus 368 ~~-~g~~~~i~~a~~~g~~aa~~i~~ 392 (460)
T 1cjc_A 368 VK-RGPTGVITTTMTDSFLTGQILLQ 392 (460)
T ss_dssp HH-HCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CC-cCCCccHHHHHHHHHHHHHHHHH
Confidence 98 5555 577899999999999975
No 79
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.96 E-value=2.9e-29 Score=264.17 Aligned_cols=278 Identities=14% Similarity=0.082 Sum_probs=199.7
Q ss_pred EEEEeeCCccHHHHHHHHHhh--CCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQT--NQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKR 166 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~--~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (535)
.+|+|||+|++|+.+|..+.. .+.+|+|||+++.+.|.+ .++.. ..+. .+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~-~~~~~---~~g~--------------~~~~-------- 56 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTP-AFPHL---AMGW--------------RKFE-------- 56 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGG-GHHHH---HHTC--------------SCGG--------
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCC-Ccchh---ccCc--------------cCHH--------
Confidence 368999999999999987766 789999999999776643 22222 1110 0000
Q ss_pred HHHHHHHHHHHHHHhcCcEEEEeEEEEecC--CEEEEce-eEEEcceEEEeeCceecC-CCC--C--CceechhhHHhcc
Q psy14461 167 FCIRAKNDSMRELKALGIDIVRTAAAFTNP--HTIKLSN-RSVTGFNFLLAVERRCLP-EPR--N--SALISADDLFRLG 238 (535)
Q Consensus 167 ~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~--~~v~~~~-~~~~~d~lViATGs~p~~-~i~--G--~~v~~~~~~~~~~ 238 (535)
++...+...++..||+++.+++..++. ++|.+++ .++.||+||+|||++|.. .+. + ..+++.+++..+.
T Consensus 57 ---~~~~~~~~~~~~~gv~~~~~~v~~id~~~~~v~~~~g~~i~~d~liiAtG~~~~~pg~~~~g~~~~~~~~~~a~~~~ 133 (430)
T 3h28_A 57 ---DISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVFGAEGQEENSTSICTAEHALETQ 133 (430)
T ss_dssp ---GSEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEECCSBTHHHHSCCCSSHHHHHHHH
T ss_pred ---HHHHHHHHHHHhcCCEEEEEEEEEEECCCCEEEECCCcEEECCEEEEcCCcccccCCCCCcCCccCcCCHHHHHHHH
Confidence 111112244566799999888877653 4677765 679999999999999876 332 2 3456666665543
Q ss_pred C------CCCcEEEECCChHH------HHHH----HHHHhCC----CcEEEEEc-CcCC----ccCcHHHHHHHHHhhhc
Q psy14461 239 A------WPGKTLVLGGSLMA------VEIA----ATLNFLG----VPVTLVYS-RRLL----KHFDQEMVRILLSSLTK 293 (535)
Q Consensus 239 ~------~~k~vvViGgG~~g------~e~A----~~l~~~g----~~Vtlv~~-~~~l----~~~~~~~~~~~~~~l~~ 293 (535)
+ ..++++|||+|+.| +|+| ..++++| .+|+++++ +.+. +.+ ++..+.+++.+++
T Consensus 134 ~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~-~~~~~~l~~~l~~ 212 (430)
T 3h28_A 134 KKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGI-GASKRLVEDLFAE 212 (430)
T ss_dssp HHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCS-TTHHHHHHHHHHH
T ss_pred HHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCccccccccCcc-hHHHHHHHHHHHH
Confidence 1 13467888987654 7777 5566777 48999998 7652 222 3477888899999
Q ss_pred CCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccc-cCeeecCCC-ceEcCCCCCc
Q psy14461 294 AGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHH-IGVDIKKKS-YVVCNEKDQT 370 (535)
Q Consensus 294 ~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~-~gl~~~~~G-~i~vd~~~~T 370 (535)
.||++ +++.|++|+.+ . +++++ .+++..++++|.+++++|++|+.... +. .++ .+++| +|.||+++||
T Consensus 213 ~GV~i~~~~~v~~v~~~---~--v~~~~-~~~~g~~i~~D~vv~a~G~~~~~~l~--~~~~gl-~~~~G~~i~Vd~~l~t 283 (430)
T 3h28_A 213 RNIDWIANVAVKAIEPD---K--VIYED-LNGNTHEVPAKFTMFMPSFQGPEVVA--SAGDKV-ANPANKMVIVNRCFQN 283 (430)
T ss_dssp TTCEEECSCEEEEECSS---E--EEEEC-TTSCEEEEECSEEEEECEEECCHHHH--TTCTTT-BCTTTCCBCCCTTSBC
T ss_pred CCCEEEeCCEEEEEeCC---e--EEEEe-cCCCceEEeeeEEEECCCCccchhHh--hccccC-cCCCCCEEecCccccC
Confidence 99999 99999999742 2 34432 12334489999999999999875432 11 466 57789 9999999998
Q ss_pred -CCCCEEEeCCcCCC-----------CCCcHHHHHHHHHHHHHHHhC
Q psy14461 371 -SVGNIFAVGGIVHG-----------KPNNASMAAISARLIIERLYG 405 (535)
Q Consensus 371 -~~~~IyA~GD~~~~-----------~~~~~~~A~~~g~~aa~~i~g 405 (535)
+.|||||+|||+.. .|++.+.|..||++||+||..
T Consensus 284 ~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~ 330 (430)
T 3h28_A 284 PTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVN 330 (430)
T ss_dssp SSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 99999999999841 267899999999999999973
No 80
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.96 E-value=2.6e-29 Score=265.93 Aligned_cols=275 Identities=13% Similarity=0.042 Sum_probs=196.5
Q ss_pred EEEEeeCCccHHHHHHHHHhh-C------CCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQT-N------QRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAAT 161 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~-~------~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~ 161 (535)
++|+|||+|++|+.+|..+.. . +.+|+|||+.+.+.+. ..+ ++.. + .....++.
T Consensus 4 ~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~----~~~--gv~p------~-------~~~~~~~~ 64 (456)
T 1lqt_A 4 YYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGL----VRS--GVAP------D-------HPKIKSIS 64 (456)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTH----HHH--TSCT------T-------CTGGGGGH
T ss_pred CEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCc----ccc--ccCC------C-------CCCHHHHH
Confidence 678999999999999987766 4 8999999998764221 111 1110 0 00111122
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCcEEEEeEEEEecCCEEEEceeEEEcceEEEeeCce-ecC-CCCC---CceechhhHHh
Q psy14461 162 KLIKRFCIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLSNRSVTGFNFLLAVERR-CLP-EPRN---SALISADDLFR 236 (535)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~~~~~~~d~lViATGs~-p~~-~i~G---~~v~~~~~~~~ 236 (535)
.+ +...++..+|+++.+.. + .++|++.+.++.||+||||||+. |+. ++|| .+++++.+++.
T Consensus 65 ~~-----------~~~~~~~~~v~~~~~v~--v-~~~v~~~~~~~~~d~lViAtG~~~~~~~~ipG~~~~gv~~~~~~~~ 130 (456)
T 1lqt_A 65 KQ-----------FEKTAEDPRFRFFGNVV--V-GEHVQPGELSERYDAVIYAVGAQSDRMLNIPGEDLPGSIAAVDFVG 130 (456)
T ss_dssp HH-----------HHHHHTSTTEEEEESCC--B-TTTBCHHHHHHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHH
T ss_pred HH-----------HHHHHhcCCCEEEeeEE--E-CCEEEECCCeEeCCEEEEeeCCCCCCCCCCCCCCCCCcEEHHHHHh
Confidence 21 23456678999987732 2 34455544457899999999997 677 8998 46788777642
Q ss_pred -----------ccC-CCCcEEEECCChHHHHHHHHHHhC--------------------C-CcEEEEEc-CcCCccCcH-
Q psy14461 237 -----------LGA-WPGKTLVLGGSLMAVEIAATLNFL--------------------G-VPVTLVYS-RRLLKHFDQ- 281 (535)
Q Consensus 237 -----------~~~-~~k~vvViGgG~~g~e~A~~l~~~--------------------g-~~Vtlv~~-~~~l~~~~~- 281 (535)
+.. .+++|+|||+|++|+|+|..|++. | .+|+++++ +.+.+.+.+
T Consensus 131 ~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~ 210 (456)
T 1lqt_A 131 WYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTL 210 (456)
T ss_dssp HHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHH
T ss_pred hhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChH
Confidence 221 368999999999999999999874 5 49999998 655432221
Q ss_pred ------------------HH------------------HHHHHHhhhc------CCeEE-cceEEEEEEEeCCCcE-EEE
Q psy14461 282 ------------------EM------------------VRILLSSLTK------AGVSI-QCCVIEKVISSFDGMK-GVR 317 (535)
Q Consensus 282 ------------------~~------------------~~~~~~~l~~------~gV~i-~~~~v~~i~~~~~~~~-~v~ 317 (535)
++ .+.+.+.+++ +||++ +++.+.+|..+ +.+ .|+
T Consensus 211 elrel~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~--~~v~~v~ 288 (456)
T 1lqt_A 211 ELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGK--RKVERIV 288 (456)
T ss_dssp HHHHGGGCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECS--SSCCEEE
T ss_pred HHHHhhcCCCceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecC--CcEeEEE
Confidence 11 2344455555 79999 99999999864 332 244
Q ss_pred EecC-------------CCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCC-cCCCCEEEeCCcCC
Q psy14461 318 GFHP-------------ESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQ-TSVGNIFAVGGIVH 383 (535)
Q Consensus 318 ~~~~-------------~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~-T~~~~IyA~GD~~~ 383 (535)
++.+ .+|+..++++|+|++|+|++|++ + .+++++++|+|.+|+++| |+.|+|||+|||+
T Consensus 289 ~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~--l----~gl~~d~~g~i~vn~~~rvt~~pgvya~GD~~- 361 (456)
T 1lqt_A 289 LGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVP--T----PGLPFDDQSGTIPNVGGRINGSPNEYVVGWIK- 361 (456)
T ss_dssp EEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCC--C----TTSCCBTTTTBCCEETTEETTCSSEEECTHHH-
T ss_pred EEEEEecCCCcccccccCCCceEEEEcCEEEEccccccCC--C----CCCcccCCCCeeECCCCcCCCCCCEEEEeccC-
Confidence 4310 13544579999999999999998 2 256778889999999999 8999999999998
Q ss_pred CCCC-cHHHHHHHHHHHHHHHhC
Q psy14461 384 GKPN-NASMAAISARLIIERLYG 405 (535)
Q Consensus 384 ~~~~-~~~~A~~~g~~aa~~i~g 405 (535)
.+|. .+..|+.+|+.+|.+|++
T Consensus 362 ~gp~~~i~~a~~~g~~~a~~i~~ 384 (456)
T 1lqt_A 362 RGPTGVIGTNKKDAQDTVDTLIK 384 (456)
T ss_dssp HCSCSCTTHHHHHHHHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHHHHHH
Confidence 5555 567899999999999975
No 81
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.96 E-value=1.7e-27 Score=253.07 Aligned_cols=307 Identities=10% Similarity=-0.000 Sum_probs=197.5
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCC-----CeEEEEecCCcccccccccc-cccccccchhhccccccccc--ccccCHHH
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQ-----RRDELQERGSHLSFRKKRRL-YYPVAMSDLELEQDSTSALN--VTIRNWNA 159 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~-----~~V~lie~~~~~~~~~~~l~-~~~~~i~~~~~~~~~~~~~~--~~~~~~~~ 159 (535)
.++|+|||+|++|+++|..+...+ .+|+|||+++.+++.+..++ .....++- +.....+. .....+..
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~----~~~l~~~~~p~~~~~~~~ 105 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISF----LKDLVSLRNPTSPYSFVN 105 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCT----TSSSSTTTCTTCTTSHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcch----hhccccccCCCCCCChhH
Confidence 478999999999999998777666 89999999998776543221 11000000 00000000 00111111
Q ss_pred HHHHHHH------------HHHHHHHHHHHHHHhcCcEEEEeE-EEEec-----CC----EEEEce-e----EEEcceEE
Q psy14461 160 ATKLIKR------------FCIRAKNDSMRELKALGIDIVRTA-AAFTN-----PH----TIKLSN-R----SVTGFNFL 212 (535)
Q Consensus 160 l~~~~~~------------~~~~~~~~~~~~~~~~gV~~~~g~-~~~~~-----~~----~v~~~~-~----~~~~d~lV 212 (535)
....... ....+...+....+..++++..++ +..++ .+ +|.+.+ . ++.||+||
T Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lV 185 (463)
T 3s5w_A 106 YLHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALV 185 (463)
T ss_dssp HHHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEE
T ss_pred hhhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEE
Confidence 1100000 001122222344455678777765 43332 22 344433 2 89999999
Q ss_pred EeeCceecC-C-CCC---C-ceechhhHHh-ccC------CCCcEEEECCChHHHHHHHHHHhC--CCcEEEEEc-CcCC
Q psy14461 213 LAVERRCLP-E-PRN---S-ALISADDLFR-LGA------WPGKTLVLGGSLMAVEIAATLNFL--GVPVTLVYS-RRLL 276 (535)
Q Consensus 213 iATGs~p~~-~-i~G---~-~v~~~~~~~~-~~~------~~k~vvViGgG~~g~e~A~~l~~~--g~~Vtlv~~-~~~l 276 (535)
||||+.|.. + +++ . .++++.++.. +.. .+++|+|||+|.+|+|+|..|++. +.+|++++| +.++
T Consensus 186 lAtG~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~ 265 (463)
T 3s5w_A 186 VSPGGTPRIPQVFRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALK 265 (463)
T ss_dssp ECCCCEECCCGGGGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCC
T ss_pred ECCCCCCCCcchhhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCc
Confidence 999999876 4 333 2 5565555543 332 478999999999999999999999 899999999 7765
Q ss_pred cc--------------------CcHHHHHHHHHhhhc--------------------------CCeEE-cceEEEEEEEe
Q psy14461 277 KH--------------------FDQEMVRILLSSLTK--------------------------AGVSI-QCCVIEKVISS 309 (535)
Q Consensus 277 ~~--------------------~~~~~~~~~~~~l~~--------------------------~gV~i-~~~~v~~i~~~ 309 (535)
|. ++++....+.+.+.. .||++ +++.|++++.+
T Consensus 266 p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~ 345 (463)
T 3s5w_A 266 PADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATAT 345 (463)
T ss_dssp BCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEE
T ss_pred CccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEec
Confidence 52 222223333333222 69999 99999999886
Q ss_pred CCCcEEEEEecCCCCCceEEEcCEEEEccCCCCC--CCCCCccccCeeecCCCceEcCCCCCcC-----CCCEEEeCCcC
Q psy14461 310 FDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFD--FAALNLHHIGVDIKKKSYVVCNEKDQTS-----VGNIFAVGGIV 382 (535)
Q Consensus 310 ~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~--~~~l~l~~~gl~~~~~G~i~vd~~~~T~-----~~~IyA~GD~~ 382 (535)
++.+.|++.+..+|+.+++++|.||+|+|++|+ .+++ +.+...+ |.+.||+++++. .|+|||+|||.
T Consensus 346 -~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l--~~l~~~~---g~i~v~~~~~~~~~~~~~~~Ifa~G~~~ 419 (463)
T 3s5w_A 346 -AQGIELALRDAGSGELSVETYDAVILATGYERQLHRQLL--EPLAEYL---GDHEIGRDYRLQTDERCKVAIYAQGFSQ 419 (463)
T ss_dssp -TTEEEEEEEETTTCCEEEEEESEEEECCCEECCC-CTTT--GGGGGGB---C--CCCTTSBCCBCTTBCSEEEESSCCH
T ss_pred -CCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchh--HHHHHHh---CCcccCcccccccCCCCCCeEEEcCCCc
Confidence 566778886545787667999999999999999 5555 4333222 789999999864 46799999997
Q ss_pred C----CCCCcHHHHHHHHHHHHHHHh
Q psy14461 383 H----GKPNNASMAAISARLIIERLY 404 (535)
Q Consensus 383 ~----~~~~~~~~A~~~g~~aa~~i~ 404 (535)
. ..+.+...|.+++++++..+-
T Consensus 420 ~~~g~~~~~l~~~a~r~~~i~~~~~~ 445 (463)
T 3s5w_A 420 ASHGLSDTLLSVLPVRAEEISGSLYQ 445 (463)
T ss_dssp HHHCTTTTSSTTHHHHHHHHHHHHHH
T ss_pred ccCCcCccchhHHHHHHHHHHHHHHh
Confidence 4 346677889999999877664
No 82
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.95 E-value=1.8e-26 Score=245.10 Aligned_cols=281 Identities=12% Similarity=-0.009 Sum_probs=189.9
Q ss_pred EEEEeeCCccHHHHHHHHHhh---CCCe---EEEEecCCccccccc----------cccc----cccc---ccchhhccc
Q psy14461 89 LYLDRIGDEGILLEEELKRQT---NQRR---DELQERGSHLSFRKK----------RRLY----YPVA---MSDLELEQD 145 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~---~~~~---V~lie~~~~~~~~~~----------~l~~----~~~~---i~~~~~~~~ 145 (535)
.+|+|||+|++|+++|..+.. .+.+ |+|||+.+.+++... +++. |... .+.....++
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 478999999999999998877 7888 999999876542211 0010 0000 000000000
Q ss_pred ccccc------cccccCHHHHHHHHHHHHHHHHHHHHHHHHhcCcE--EEEe-EEEEe--cCC----EEEEce------e
Q psy14461 146 STSAL------NVTIRNWNAATKLIKRFCIRAKNDSMRELKALGID--IVRT-AAAFT--NPH----TIKLSN------R 204 (535)
Q Consensus 146 ~~~~~------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gV~--~~~g-~~~~~--~~~----~v~~~~------~ 204 (535)
++... ....++...+.++.. ..++..|++ +..+ ++..+ +.. +|++.+ .
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~-----------~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~ 151 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIK-----------GRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIY 151 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHH-----------HHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEE
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHH-----------HHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceE
Confidence 00000 011123333333333 334445665 5433 23332 122 566643 5
Q ss_pred EEEcceEEEeeC--ceecC-CCCC-C----ceechhhHHhcc-CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-Cc
Q psy14461 205 SVTGFNFLLAVE--RRCLP-EPRN-S----ALISADDLFRLG-AWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RR 274 (535)
Q Consensus 205 ~~~~d~lViATG--s~p~~-~i~G-~----~v~~~~~~~~~~-~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~ 274 (535)
++.||+||+||| +.|+. ++|| + .++++.++.... ..+++|+|||+|++|+|+|..|++.|.+|+++++ +.
T Consensus 152 ~~~~d~VVvAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 152 SEEFDYVVCCTGHFSTPYVPEFEGFEKFGGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp EEEESEEEECCCSSSSBCCCCCBTTTTCCSEEEEGGGCCCGGGGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred EEEcCEEEECCCCCCCCccCCCCCcccCCceEEehhhhCCHhHcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 789999999999 88988 8888 2 255666555433 3579999999999999999999999999999999 77
Q ss_pred CCccCcHHHHHHHHHhhhcCCeEEcceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCe
Q psy14461 275 LLKHFDQEMVRILLSSLTKAGVSIQCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGV 354 (535)
Q Consensus 275 ~l~~~~~~~~~~~~~~l~~~gV~i~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl 354 (535)
+++..- ..||++. ..|++++. + .|++. +|+ ++++|.||+|+|++|+++++. +.+++
T Consensus 232 ~~~~~~------------~~~V~~~-~~V~~i~~---~--~V~~~---dG~--~i~~D~Vi~atG~~p~~~~l~-~~~gl 287 (464)
T 2xve_A 232 PMGYKW------------PENWDER-PNLVRVDT---E--NAYFA---DGS--SEKVDAIILCTGYIHHFPFLN-DDLRL 287 (464)
T ss_dssp CCCCCC------------CTTEEEC-SCEEEECS---S--EEEET---TSC--EEECSEEEECCCBCCCCTTBC-TTTCC
T ss_pred CCCCCC------------CCceEEc-CCeEEEeC---C--EEEEC---CCC--EEeCCEEEECCCCCCCCCCcC-ccccc
Confidence 765321 2477773 45777752 2 36663 787 789999999999999999884 34678
Q ss_pred eecCCCceEcCC---CCCcCCCCEEEeCCcCCCCCCcHHHHHHHHHHHHHHHhCCC
Q psy14461 355 DIKKKSYVVCNE---KDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYGMQ 407 (535)
Q Consensus 355 ~~~~~G~i~vd~---~~~T~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~~ 407 (535)
+++++|++ ++. .++|+.|+|||+||+. . ....+.|..||+.+|++|.|..
T Consensus 288 ~~~~~~~v-~~~~~~~~~t~~p~i~aiGd~~-~-~~~~~~a~~qa~~~a~~l~G~~ 340 (464)
T 2xve_A 288 VTNNRLWP-LNLYKGVVWEDNPKFFYIGMQD-Q-WYSFNMFDAQAWYARDVIMGRL 340 (464)
T ss_dssp CCCSSSCC-SSEETTTEESSSTTEEECSCSC-C-SSCHHHHHHHHHHHHHHHTTSS
T ss_pred ccCCCccc-ccccceEecCCCCCEEEEeCcc-c-ccchHHHHHHHHHHHHHHcCCC
Confidence 87766566 443 3578999999999998 4 4578899999999999999864
No 83
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.95 E-value=9.5e-28 Score=268.13 Aligned_cols=271 Identities=10% Similarity=0.078 Sum_probs=193.1
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHH
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRF 167 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (535)
..+|+|||+|++|+.+|..+...+.+|+|||+++.+++....... ++ + ..+|..+.++.+..
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~----~p-------g-------~~~~~~~~~~~~~~ 450 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAA----LP-------G-------LGEWSYHRDYRETQ 450 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTT----ST-------T-------CGGGHHHHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeeccc----CC-------C-------hHHHHHHHHHHHHH
Confidence 368999999999999999988889999999999876432110000 11 1 11344444444322
Q ss_pred HHHHHHHHHHHHHhcCcEEEEeEEEEecCCEEEEce-eEEEcceEEEeeCcee--------cC-CCCC-C----ceechh
Q psy14461 168 CIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLSN-RSVTGFNFLLAVERRC--------LP-EPRN-S----ALISAD 232 (535)
Q Consensus 168 ~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~~-~~~~~d~lViATGs~p--------~~-~i~G-~----~v~~~~ 232 (535)
++.+. .....++++.. .+.+++++ ..+.||+||||||+.| .. ++|| + ++++..
T Consensus 451 i~~~~-----~~~~~~v~i~~-------~~~v~~~~~~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~ 518 (729)
T 1o94_A 451 ITKLL-----KKNKESQLALG-------QKPMTADDVLQYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTPE 518 (729)
T ss_dssp HHHHH-----HHSTTCEEECS-------CCCCCHHHHHTSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECHH
T ss_pred HHHhh-----cccCCceEEEe-------CeEEehhhccccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEHH
Confidence 22110 01123555432 23344433 4688999999999984 45 7888 4 688888
Q ss_pred hHHhccC-CCCcEEEEC--CChHHHHHHHHHHhCCCcEEEEEc-CcCCcc--CcHHHHHHHHHhhhcCCeEE-cceEEEE
Q psy14461 233 DLFRLGA-WPGKTLVLG--GSLMAVEIAATLNFLGVPVTLVYS-RRLLKH--FDQEMVRILLSSLTKAGVSI-QCCVIEK 305 (535)
Q Consensus 233 ~~~~~~~-~~k~vvViG--gG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~--~~~~~~~~~~~~l~~~gV~i-~~~~v~~ 305 (535)
+++.... .+++|+||| ||++|+|+|..|+++|.+||++++ + +++. ++.. ...+.+.|+++||++ +++.+++
T Consensus 519 ~~l~~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~~~~~-~~~~~~~l~~~GV~i~~~~~v~~ 596 (729)
T 1o94_A 519 QVMDGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMHFTLE-YPNMMRRLHELHVEELGDHFCSR 596 (729)
T ss_dssp HHHHCCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHHHTTC-HHHHHHHHHHTTCEEECSEEEEE
T ss_pred HHhcCCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cccccccccc-HHHHHHHHHhCCCEEEcCcEEEE
Confidence 8876543 357999999 999999999999999999999999 7 6542 3322 456778888999999 9999999
Q ss_pred EEEeCCCcEEEEEecCCCC-----------------CceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCC
Q psy14461 306 VISSFDGMKGVRGFHPESK-----------------EPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKD 368 (535)
Q Consensus 306 i~~~~~~~~~v~~~~~~~G-----------------~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~ 368 (535)
|+. +.+.++... .++ +++++++|.||+|+|++|+++++ +.++ ..+|+++
T Consensus 597 i~~---~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l~--~~l~--------~~vd~~~ 662 (729)
T 1o94_A 597 IEP---GRMEIYNIW-GDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECTLW--NELK--------ARESEWA 662 (729)
T ss_dssp EET---TEEEEEETT-CSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECCHHH--HHHH--------HTGGGTG
T ss_pred EEC---CeEEEEEec-CCceEEecccccccccccCCcceeeeCCEEEECCCCCCChHHH--HHHh--------hhccccc
Confidence 974 334443311 122 23359999999999999999865 3321 1368899
Q ss_pred CcCCCCEEEeCCcCCCCCCcHHHHHHHHHHHHHHHhCC
Q psy14461 369 QTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYGM 406 (535)
Q Consensus 369 ~T~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~ 406 (535)
+|+.|+|||+|||+ + +..+..|++||+.||.+|.+.
T Consensus 663 ~t~~~~VyAiGD~~-~-~~~~~~A~~~G~~aA~~i~~~ 698 (729)
T 1o94_A 663 ENDIKGIYLIGDAE-A-PRLIADATFTGHRVAREIEEA 698 (729)
T ss_dssp GGTCCEEEECGGGT-S-CCCHHHHHHHHHHHHHTTTSS
T ss_pred ccCCCCeEEEeCcc-c-hhhHHHHHHHHHHHHHHhhhh
Confidence 99999999999999 4 667788999999999999864
No 84
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.95 E-value=7.5e-28 Score=267.76 Aligned_cols=263 Identities=16% Similarity=0.095 Sum_probs=196.2
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHH
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRF 167 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (535)
..+|+|||+|++|+.+|..+...+.+|+|||+++.+++....... +++ ..++..+..+..
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~~----~p~--------------~~~~~~~~~~~~-- 450 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESA----LPG--------------LSAWGRVKEYRE-- 450 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHHT----STT--------------CGGGGHHHHHHH--
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeeccC----CCc--------------hhHHHHHHHHHH--
Confidence 368999999999999999888889999999999876543211000 111 113334444433
Q ss_pred HHHHHHHHHHHHHhc-CcEEEEeEEEEecCCEEEEce-eEEEcceEEEeeCceec--------C-CCCC---Cceechhh
Q psy14461 168 CIRAKNDSMRELKAL-GIDIVRTAAAFTNPHTIKLSN-RSVTGFNFLLAVERRCL--------P-EPRN---SALISADD 233 (535)
Q Consensus 168 ~~~~~~~~~~~~~~~-gV~~~~g~~~~~~~~~v~~~~-~~~~~d~lViATGs~p~--------~-~i~G---~~v~~~~~ 233 (535)
..++.. +|+++.++ .++..+ .++.||+||||||+.|+ . ++|| ..+++..+
T Consensus 451 ---------~~~~~~~gv~~~~~~-------~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~~~~v~~~~~ 514 (690)
T 3k30_A 451 ---------AVLAELPNVEIYRES-------PMTGDDIVEFGFEHVITATGATWRTDGVARFHTTALPIAEGMQVLGPDD 514 (690)
T ss_dssp ---------HHHHTCTTEEEESSC-------CCCHHHHHHTTCCEEEECCCEEECSSCCSSSCSSCCCBCTTSEEECHHH
T ss_pred ---------HHHHHcCCCEEEECC-------eecHHHHhhcCCCEEEEcCCCccccccccccCCCCCCCCCCCcEEcHHH
Confidence 445555 88877653 233222 46789999999999964 5 6787 46888888
Q ss_pred HHhcc-CCCCcEEEEC--CChHHHHHHHHHHhCCCcEEEEEc-CcCCccCc-HHHHHHHHHhhhcCCeEE-cceEEEEEE
Q psy14461 234 LFRLG-AWPGKTLVLG--GSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFD-QEMVRILLSSLTKAGVSI-QCCVIEKVI 307 (535)
Q Consensus 234 ~~~~~-~~~k~vvViG--gG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~-~~~~~~~~~~l~~~gV~i-~~~~v~~i~ 307 (535)
++... ..+++|+||| +|++|+|+|..|++.|.+|+++++ +.+++..+ +.....+.+.+++.||++ ++++|++|+
T Consensus 515 ~l~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~ 594 (690)
T 3k30_A 515 LFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVG 594 (690)
T ss_dssp HHTTCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEE
T ss_pred HhCCCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEE
Confidence 87653 3357899999 999999999999999999999999 88776543 556778888899999999 999999997
Q ss_pred EeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCCCCC
Q psy14461 308 SSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPN 387 (535)
Q Consensus 308 ~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~~~ 387 (535)
. +...+.... +++.+++++|.|++|+|++|++.++ +.++ ..+. +|+.|+|||+|||+ + +.
T Consensus 595 ~---~~~~v~~~~--~~~~~~i~aD~VV~A~G~~p~~~l~--~~l~----~~~~-------~t~~~~VyaiGD~~-~-~~ 654 (690)
T 3k30_A 595 A---GGVTVRDTY--ASIERELECDAVVMVTARLPREELY--LDLV----ARRD-------AGEIASVRGIGDAW-A-PG 654 (690)
T ss_dssp T---TEEEEEETT--TCCEEEEECSEEEEESCEEECCHHH--HHHH----HHHH-------HTSCSEEEECGGGT-S-CB
T ss_pred C---CeEEEEEcc--CCeEEEEECCEEEECCCCCCChHHH--HHHh----hhhc-------ccCCCCEEEEeCCC-c-hh
Confidence 4 334444322 3444589999999999999998865 3322 1221 78999999999999 4 55
Q ss_pred cHHHHHHHHHHHHHHHhCC
Q psy14461 388 NASMAAISARLIIERLYGM 406 (535)
Q Consensus 388 ~~~~A~~~g~~aa~~i~g~ 406 (535)
....|++||+.||.||.+.
T Consensus 655 ~~~~A~~~g~~aa~~i~~~ 673 (690)
T 3k30_A 655 TIAAAVWSGRRAAEEFDAV 673 (690)
T ss_dssp CHHHHHHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHHHHHHHHhh
Confidence 6667999999999999875
No 85
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.95 E-value=7.3e-27 Score=267.92 Aligned_cols=272 Identities=11% Similarity=0.009 Sum_probs=193.6
Q ss_pred eEEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHH
Q psy14461 87 AVLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKR 166 (535)
Q Consensus 87 ~~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (535)
..++|+|||+|++|+.+|+.+...+.+|+|||+++.+++.....+.. .+.+. ...++..
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~--~i~~~---------------~~~~~~~---- 185 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDTAGE--QIDGM---------------DSSAWIE---- 185 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCC--EETTE---------------EHHHHHH----
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccCCcc--ccCCC---------------CHHHHHH----
Confidence 34789999999999999999988899999999998764321100000 01110 0111111
Q ss_pred HHHHHHHHHHHHHHh-cCcEEEEeE-EEEecC-CEE----------EE-------ce--eEEEcceEEEeeCceecC-CC
Q psy14461 167 FCIRAKNDSMRELKA-LGIDIVRTA-AAFTNP-HTI----------KL-------SN--RSVTGFNFLLAVERRCLP-EP 223 (535)
Q Consensus 167 ~~~~~~~~~~~~~~~-~gV~~~~g~-~~~~~~-~~v----------~~-------~~--~~~~~d~lViATGs~p~~-~i 223 (535)
.....+.. .+|+++.++ +..++. ..+ .+ .+ .++.||+||||||++|+. ++
T Consensus 186 -------~~~~~l~~~~~v~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~i 258 (965)
T 2gag_A 186 -------QVTSELAEAEETTHLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIVF 258 (965)
T ss_dssp -------HHHHHHHHSTTEEEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCCC
T ss_pred -------HHHHHHhhcCCcEEEeCCEEEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCCCC
Confidence 11233444 488887664 222221 111 11 11 468999999999999998 89
Q ss_pred CC---CceechhhH---Hh-ccC-CCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcC
Q psy14461 224 RN---SALISADDL---FR-LGA-WPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKA 294 (535)
Q Consensus 224 ~G---~~v~~~~~~---~~-~~~-~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~ 294 (535)
|| ++++++.++ +. ... .+++|+|||+|++|+|+|..|++.|.+|+++++ +.+++. .+.+++.
T Consensus 259 pG~~~~gv~~~~~~~~~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~~---------~~~l~~~ 329 (965)
T 2gag_A 259 ENNDRPGIMLAGAVRSYLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARSSISAA---------AAQAVAD 329 (965)
T ss_dssp BTCCSTTEEEHHHHHHHHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCHH---------HHHHHHT
T ss_pred CCCCCCCEEEhHHHHHHHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccchh---------HHHHHhC
Confidence 98 567776544 32 122 348999999999999999999999999999999 776532 4567888
Q ss_pred CeEE-cceEEEEEEEe-CCCcEEEEEec--CC--CCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCC
Q psy14461 295 GVSI-QCCVIEKVISS-FDGMKGVRGFH--PE--SKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKD 368 (535)
Q Consensus 295 gV~i-~~~~v~~i~~~-~~~~~~v~~~~--~~--~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~ 368 (535)
||++ +++.++++..+ ++....|++.+ .. +|+..++++|.|++++|++||++++ .. .+|.|.+|+++
T Consensus 330 GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~--~~------~~g~i~vd~~~ 401 (965)
T 2gag_A 330 GVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLH--SQ------RQGKLDWDTTI 401 (965)
T ss_dssp TCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHH--HH------TTCCEEEETTT
T ss_pred CeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHH--Hh------CCCcEEEcCcc
Confidence 9999 99999999873 12222566642 00 2544589999999999999999865 22 24678899888
Q ss_pred C-----cCCCCEEEeCCcCCCCCCcHHHHHHHHHHHHHHHhC
Q psy14461 369 Q-----TSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYG 405 (535)
Q Consensus 369 ~-----T~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g 405 (535)
+ |+.|+|||+|||+ +.+.+. .|..||++||.+|++
T Consensus 402 ~~~v~~ts~p~IyAaGD~a-~~~~l~-~A~~~G~~aA~~i~~ 441 (965)
T 2gag_A 402 HAFVPADAVANQHLAGAMT-GRLDTA-SALSTGAATGAAAAT 441 (965)
T ss_dssp TEEEECSCCTTEEECGGGG-TCCSHH-HHHHHHHHHHHHHHH
T ss_pred cccccCCCCCCEEEEEecC-CchhHH-HHHHHHHHHHHHHHH
Confidence 7 8999999999999 766655 899999999999974
No 86
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.94 E-value=1.3e-25 Score=249.00 Aligned_cols=253 Identities=13% Similarity=0.058 Sum_probs=187.1
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHH
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRF 167 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (535)
..+|+|||+|++|+.+|..+...+.+|+|||+++.+++... +... +++ ..++.++..+
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~-~~~~---~~~--------------~~~~~~~~~~---- 430 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFN-IAKQ---IPG--------------KEEFYETLRY---- 430 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHH-HHTT---STT--------------CTTHHHHHHH----
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeee-cccc---CCC--------------HHHHHHHHHH----
Confidence 36899999999999999998888999999999987654311 1100 111 1123222222
Q ss_pred HHHHHHHHHHHHHhcCcEEEEeEEEEecCCEEEEceeEE-EcceEEEeeCceecC-CCCC---CceechhhHHhcc-CCC
Q psy14461 168 CIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLSNRSV-TGFNFLLAVERRCLP-EPRN---SALISADDLFRLG-AWP 241 (535)
Q Consensus 168 ~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~~~~~-~~d~lViATGs~p~~-~i~G---~~v~~~~~~~~~~-~~~ 241 (535)
+...+++.||+++.++... . ..+ .||+||||||++|+. ++|| ..+++..+++... ..+
T Consensus 431 -------~~~~~~~~gv~~~~~~~v~--~-------~~~~~~d~lviAtG~~p~~~~i~G~~~~~v~~~~~~l~~~~~~~ 494 (671)
T 1ps9_A 431 -------YRRMIEVTGVTLKLNHTVT--A-------DQLQAFDETILASGIVPRTPPIDGIDHPKVLSYLDVLRDKAPVG 494 (671)
T ss_dssp -------HHHHHHHHTCEEEESCCCC--S-------SSSCCSSEEEECCCEEECCCCCBTTTSTTEEEHHHHHTSCCCCC
T ss_pred -------HHHHHHHcCCEEEeCcEec--H-------HHhhcCCEEEEccCCCcCCCCCCCCCCCcEeeHHHHhhCCCCCC
Confidence 2355667799988876311 1 124 899999999999999 8998 4588888877643 357
Q ss_pred CcEEEECCChHHHHHHHHHHhCCC-------------------------------------cEEEEEc-CcCC-ccCcHH
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGV-------------------------------------PVTLVYS-RRLL-KHFDQE 282 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~-------------------------------------~Vtlv~~-~~~l-~~~~~~ 282 (535)
++|+|||||++|+|+|..|++.|. +|+++++ +..+ +.+++.
T Consensus 495 ~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~~ 574 (671)
T 1ps9_A 495 NKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKT 574 (671)
T ss_dssp SEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCTT
T ss_pred CeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchhhccccccc
Confidence 899999999999999999998874 4566776 5444 356677
Q ss_pred HHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCc
Q psy14461 283 MVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSY 361 (535)
Q Consensus 283 ~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~ 361 (535)
....+.+.|+++||++ +++++++++. +.+.++ . +|+++++++|.||+|+|++||++++ +. +..
T Consensus 575 ~~~~~~~~l~~~GV~v~~~~~v~~i~~---~~v~~~-~---~G~~~~i~~D~Vi~a~G~~p~~~l~--~~----l~~--- 638 (671)
T 1ps9_A 575 TGWIHRTTLLSRGVKMIPGVSYQKIDD---DGLHVV-I---NGETQVLAVDNVVICAGQEPNRALA--QP----LID--- 638 (671)
T ss_dssp THHHHHHHHHHTTCEEECSCEEEEEET---TEEEEE-E---TTEEEEECCSEEEECCCEEECCTTH--HH----HHT---
T ss_pred cHHHHHHHHHhcCCEEEeCcEEEEEeC---CeEEEe-c---CCeEEEEeCCEEEECCCccccHHHH--HH----HHh---
Confidence 7778888899999999 9999999973 334443 2 6755589999999999999999875 22 111
Q ss_pred eEcCCCCCcCCCCEEEeCCcCCCCCCcHHHHHHHHHHHHHHH
Q psy14461 362 VVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERL 403 (535)
Q Consensus 362 i~vd~~~~T~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i 403 (535)
..++||++|||+...+..+..|++||..+|.||
T Consensus 639 ---------~g~~v~aiGD~~~~~~~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 639 ---------SGKTVHLIGGCDVAMELDARRAIAQGTRLALEI 671 (671)
T ss_dssp ---------TTCCEEECGGGTCCSSCCHHHHHHHHHHHHHHC
T ss_pred ---------cCCCEEEECCcCccCchhHHHHHHHHHHHHHhC
Confidence 226899999998333446889999999999986
No 87
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.93 E-value=3.5e-25 Score=236.89 Aligned_cols=247 Identities=13% Similarity=0.069 Sum_probs=178.5
Q ss_pred eEEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHH
Q psy14461 87 AVLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKR 166 (535)
Q Consensus 87 ~~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (535)
...+|+|||+|++|+++|+.+... .+|+|||+++.+++......+. ..+ + .. +..++..+
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~---~~g-------~-----~~-~~~~~~~~--- 166 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIK---QEG-------F-----NK-DSRKVVEE--- 166 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSE---ETT-------T-----TE-EHHHHHHH---
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccc---cCC-------C-----CC-CHHHHHHH---
Confidence 346899999999999999988777 9999999998775543211111 000 0 00 12222211
Q ss_pred HHHHHHHHHHHHHHhcCcEEEEeEEE-E--ecCCEEEE---c-e--eEEEcceEEEeeCceecC-CCCC---Cceechhh
Q psy14461 167 FCIRAKNDSMRELKALGIDIVRTAAA-F--TNPHTIKL---S-N--RSVTGFNFLLAVERRCLP-EPRN---SALISADD 233 (535)
Q Consensus 167 ~~~~~~~~~~~~~~~~gV~~~~g~~~-~--~~~~~v~~---~-~--~~~~~d~lViATGs~p~~-~i~G---~~v~~~~~ 233 (535)
+.+.+ ..+++++.++.. . .+.+.+.+ + + ..+.||+||||||+.|+. ++|| +++++..+
T Consensus 167 --------l~~~l-~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~~~~g~~~~gv~~~~~ 237 (493)
T 1y56_A 167 --------LVGKL-NENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDSTMLFENNDMPGVFRRDF 237 (493)
T ss_dssp --------HHHTC-CTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEECCCCCTTTTSTTEEEHHH
T ss_pred --------HHHHH-hcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCccCCCCCCCCCCCEEEcHH
Confidence 11223 558887655422 1 12332322 2 2 369999999999999998 8998 56888777
Q ss_pred HHhcc-----CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEcCcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEE
Q psy14461 234 LFRLG-----AWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYSRRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVI 307 (535)
Q Consensus 234 ~~~~~-----~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~ 307 (535)
+..+. ..+++++|||+|++|+| +.+++.||++ +++.+++++
T Consensus 238 ~~~~~~~~~~~~~~~vvViGgG~~gle---------------------------------~~l~~~GV~v~~~~~v~~i~ 284 (493)
T 1y56_A 238 ALEVMNVWEVAPGRKVAVTGSKADEVI---------------------------------QELERWGIDYVHIPNVKRVE 284 (493)
T ss_dssp HHHHHHTSCBCSCSEEEEESTTHHHHH---------------------------------HHHHHHTCEEEECSSEEEEE
T ss_pred HHHHHHhcccCCCCEEEEECCCHHHHH---------------------------------HHHHhCCcEEEeCCeeEEEe
Confidence 65432 23589999999999998 3455679999 999999998
Q ss_pred EeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCee--ecCCCceE-cCCCCCcCCCCEEEeCCcCCC
Q psy14461 308 SSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVD--IKKKSYVV-CNEKDQTSVGNIFAVGGIVHG 384 (535)
Q Consensus 308 ~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~--~~~~G~i~-vd~~~~T~~~~IyA~GD~~~~ 384 (535)
.+ ++...+.+ .+|+ ++++|.|++|+|++|+++++ +.+|++ ++++|+|. +|++++ +.|+|||+|||+ +
T Consensus 285 ~~-~~v~~v~~---~~g~--~i~aD~Vv~a~G~~p~~~l~--~~~g~~~~~~~~g~i~~vd~~~~-s~~~vya~GD~~-~ 354 (493)
T 1y56_A 285 GN-EKVERVID---MNNH--EYKVDALIFADGRRPDINPI--TQAGGKLRFRRGYYSPVLDEYHR-IKDGIYVAGSAV-S 354 (493)
T ss_dssp CS-SSCCEEEE---TTCC--EEECSEEEECCCEEECCHHH--HHTTCCEEEETTEEEECCCTTSE-EETTEEECSTTT-C
T ss_pred cC-CceEEEEe---CCCe--EEEeCEEEECCCcCcCchHH--HhcCCCccccCCceeeccccccC-cCCCEEEEeccC-C
Confidence 64 23334555 3676 89999999999999999876 566654 45789887 899999 999999999999 4
Q ss_pred CCCcHHHHHHHHHHHHHHHhCC
Q psy14461 385 KPNNASMAAISARLIIERLYGM 406 (535)
Q Consensus 385 ~~~~~~~A~~~g~~aa~~i~g~ 406 (535)
+.++..|..||++||.||.+.
T Consensus 355 -~~~~~~A~~~g~~aa~~i~~~ 375 (493)
T 1y56_A 355 -IKPHYANYLEGKLVGAYILKE 375 (493)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHH
T ss_pred -ccCHHHHHHHHHHHHHHHHHH
Confidence 567889999999999999863
No 88
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.92 E-value=4.8e-24 Score=225.47 Aligned_cols=174 Identities=9% Similarity=-0.035 Sum_probs=134.1
Q ss_pred EEEcceEEEeeCc--eecC-CCCC-C--------ceechhhHHhccC-CCCcEEEECCChHHHHHHHHHHhCCCc-EEEE
Q psy14461 205 SVTGFNFLLAVER--RCLP-EPRN-S--------ALISADDLFRLGA-WPGKTLVLGGSLMAVEIAATLNFLGVP-VTLV 270 (535)
Q Consensus 205 ~~~~d~lViATGs--~p~~-~i~G-~--------~v~~~~~~~~~~~-~~k~vvViGgG~~g~e~A~~l~~~g~~-Vtlv 270 (535)
++.||+||+|||+ .|+. ++|| + .++++.++..... .+++|+|||+|++|+|+|..|++.|.+ |+++
T Consensus 163 ~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~~~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~ 242 (447)
T 2gv8_A 163 KDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLTPVAKHPIYQS 242 (447)
T ss_dssp EEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGGGTTCCEEEECSSHHHHHHHHHHTTTSCSSEEEE
T ss_pred EEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChhhcCCCEEEEEccCcCHHHHHHHHHHHhCCcEEEE
Confidence 6899999999998 7777 7888 2 2556655544332 579999999999999999999999999 9999
Q ss_pred Ec-CcCCccCcHHHHHHHHHhhhcCCeEEcceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC---
Q psy14461 271 YS-RRLLKHFDQEMVRILLSSLTKAGVSIQCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA--- 346 (535)
Q Consensus 271 ~~-~~~l~~~~~~~~~~~~~~l~~~gV~i~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~--- 346 (535)
++ +.+ ++..||.+ ...|+++..+ ++ .|++. +|+ ..+++|.||+|+|++|++++
T Consensus 243 ~r~~~~---------------l~~~~i~~-~~~v~~~~~~-~~--~v~~~---dG~-~~~~~D~vi~atG~~~~~~~l~~ 299 (447)
T 2gv8_A 243 LLGGGD---------------IQNESLQQ-VPEITKFDPT-TR--EIYLK---GGK-VLSNIDRVIYCTGYLYSVPFPSL 299 (447)
T ss_dssp CTTCCS---------------CBCSSEEE-ECCEEEEETT-TT--EEEET---TTE-EECCCSEEEECCCBCCCCCCHHH
T ss_pred eCCCCc---------------CCCCCeEE-ecCeEEEecC-CC--EEEEC---CCC-EeccCCEEEECCCCCcCCCCCcc
Confidence 98 654 44567775 4567777643 22 56673 776 23789999999999999998
Q ss_pred --CCcccc--CeeecCCCceEcCCCCC---cCCCCEEEeCCcCCCCCCcHHHHHHHHHHHHHHHhCCC
Q psy14461 347 --LNLHHI--GVDIKKKSYVVCNEKDQ---TSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYGMQ 407 (535)
Q Consensus 347 --l~l~~~--gl~~~~~G~i~vd~~~~---T~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~~ 407 (535)
+ +.+ ++.. ++.+.++.+.+ |+.|+||++||+. .. ...+.|..||+.+|++|.|..
T Consensus 300 ~~l--~~~~~~i~~--~~~~~~~~~~~v~~~~~p~l~~~G~~~-~~-~~~~~a~~qa~~~a~~~~g~~ 361 (447)
T 2gv8_A 300 AKL--KSPETKLID--DGSHVHNVYQHIFYIPDPTLAFVGLAL-HV-VPFPTSQAQAAFLARVWSGRL 361 (447)
T ss_dssp HSC--CSTTTCCCS--SSSSCCSEETTTEETTCTTEEESSCCB-SS-CHHHHHHHHHHHHHHHHTTSS
T ss_pred ccc--ccccCceec--CCCcccccccccccCCCCcEEEEeccc-cc-cCchHHHHHHHHHHHHHcCCC
Confidence 6 333 3333 45566665555 7899999999998 44 478899999999999999854
No 89
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.88 E-value=1e-21 Score=211.87 Aligned_cols=290 Identities=10% Similarity=-0.044 Sum_probs=179.6
Q ss_pred EEEEEeeCCccHHHHHHHHHh-hCCCeEEEEecCCcccccc---------cccccccccccchhhcccccccccccccCH
Q psy14461 88 VLYLDRIGDEGILLEEELKRQ-TNQRRDELQERGSHLSFRK---------KRRLYYPVAMSDLELEQDSTSALNVTIRNW 157 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~-~~~~~V~lie~~~~~~~~~---------~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~ 157 (535)
.++|+|||+|++|+.+|..+. ..+.+|+|||+++.+++.. +..+...+..+ ................+.
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~-~~~~~~~~~~~~~~~~~~ 86 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFS-FDRDLLQESTWKTTYITQ 86 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCC-SCHHHHHHCCCSBSEEEH
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeec-cccccccCCCCcccCCCH
Confidence 478999999999999999887 7888999999987654221 11110000000 000000000001112234
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCc--EEEEeE-EEE--ecCC----EEEEce-eEEEcceEEEeeC--ceecC-CCC
Q psy14461 158 NAATKLIKRFCIRAKNDSMRELKALGI--DIVRTA-AAF--TNPH----TIKLSN-RSVTGFNFLLAVE--RRCLP-EPR 224 (535)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~~~~~~~~gV--~~~~g~-~~~--~~~~----~v~~~~-~~~~~d~lViATG--s~p~~-~i~ 224 (535)
.++..+.. ...++.++ ++..++ +.. .+.. +|++.+ .++.||+||+||| ++|.. ++|
T Consensus 87 ~ei~~~l~-----------~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ip 155 (540)
T 3gwf_A 87 PEILEYLE-----------DVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNLP 155 (540)
T ss_dssp HHHHHHHH-----------HHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCCCCCT
T ss_pred HHHHHHHH-----------HHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCCCCCC
Confidence 44444333 34445565 444432 222 1222 455544 5799999999999 68888 899
Q ss_pred C-C----c-eechhhHHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-Cc-CCccCc----HHHHHHHH----
Q psy14461 225 N-S----A-LISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RR-LLKHFD----QEMVRILL---- 288 (535)
Q Consensus 225 G-~----~-v~~~~~~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~-~l~~~~----~~~~~~~~---- 288 (535)
| + . +++..........+|+|+|||+|.+|+|+|..|++.+.+||+++| +. ++|..+ +...+.++
T Consensus 156 G~~~f~g~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~~ 235 (540)
T 3gwf_A 156 GLDTFEGETIHTAAWPEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIKADYD 235 (540)
T ss_dssp TGGGCCSEEEEGGGCCSSCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHHHHHHHHTHH
T ss_pred CccccCCCEEEeecCCCccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHHHHHHHhccH
Confidence 8 2 2 334333334445689999999999999999999999999999999 76 344332 22221111
Q ss_pred --------------------------------------------------------------------------------
Q psy14461 289 -------------------------------------------------------------------------------- 288 (535)
Q Consensus 289 -------------------------------------------------------------------------------- 288 (535)
T Consensus 236 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dp~ 315 (540)
T 3gwf_A 236 RIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIEDPE 315 (540)
T ss_dssp HHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHHHHHHHHHCCSHH
T ss_pred HHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHH
Confidence
Q ss_pred ----------------------HhhhcCCeEE-c--ceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCC
Q psy14461 289 ----------------------SSLTKAGVSI-Q--CCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFD 343 (535)
Q Consensus 289 ----------------------~~l~~~gV~i-~--~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~ 343 (535)
+.+.+.+|++ . ...|++|+.+ .|.+ .+|+ ++++|.||+|||++++
T Consensus 316 ~~~~l~P~~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~-----gv~~---~dG~--~~~~DvIV~ATGf~~~ 385 (540)
T 3gwf_A 316 TARKLMPKGLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAK-----GVVT---EDGV--LHELDVLVFATGFDAV 385 (540)
T ss_dssp HHHHHCCCSCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSS-----EEEE---TTCC--EEECSEEEECCCBSCS
T ss_pred HHHhCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEecC-----eEEc---CCCC--EEECCEEEECCccCcc
Confidence 0122457888 4 7888888653 2555 4887 8999999999999999
Q ss_pred CCCCCccccCeeecCCCceEcCC----------CCC-cCCCCEEEe-CCcCCCCCCcHHHHHHHHHHHHHHHh
Q psy14461 344 FAALNLHHIGVDIKKKSYVVCNE----------KDQ-TSVGNIFAV-GGIVHGKPNNASMAAISARLIIERLY 404 (535)
Q Consensus 344 ~~~l~l~~~gl~~~~~G~i~vd~----------~~~-T~~~~IyA~-GD~~~~~~~~~~~A~~~g~~aa~~i~ 404 (535)
+.++ ...++. ..+| +.+++ .+. .+.||+|.+ |... ........+..|++.+++.|.
T Consensus 386 ~~~~--~~~~i~-g~~G-~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~-~~~s~~~~~e~q~~~i~~~i~ 453 (540)
T 3gwf_A 386 DGNY--RRIEIR-GRDG-LHINDHWDGQPTSYLGVSTANFPNWFMVLGPNG-PFTNLPPSIETQVEWISDTIG 453 (540)
T ss_dssp SHHH--HTSEEE-CGGG-CBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSC-BCSCHHHHHHHHHHHHHHHHH
T ss_pred ccCc--CcceEE-CCCC-cCHHHhhccChhhccccccCCCCceEEEecCCC-CCccHHHHHHHHHHHHHHHHH
Confidence 7543 222221 1122 22221 122 378999999 8776 444566788999999998875
No 90
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.87 E-value=3.6e-22 Score=184.23 Aligned_cols=149 Identities=21% Similarity=0.286 Sum_probs=128.3
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCc---------cC-----cHHHHHHHHHhhhcCCeEE-cceEEEEE
Q psy14461 243 KTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLK---------HF-----DQEMVRILLSSLTKAGVSI-QCCVIEKV 306 (535)
Q Consensus 243 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~---------~~-----~~~~~~~~~~~l~~~gV~i-~~~~v~~i 306 (535)
+|+|||||++|+++|..|++.|.+|+++++ +.+++ .+ ++++.+.+.+.+++.||++ .+ +++++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i 81 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VVKGV 81 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEE
Confidence 699999999999999999999999999999 65552 23 5788899999999999999 98 99999
Q ss_pred EEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCCCCC
Q psy14461 307 ISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKP 386 (535)
Q Consensus 307 ~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~~~~ 386 (535)
+.+ ++.+.+++ .+| ++++|.||+|+|..|+. + +.++++++ +|+|.||++++|+.|+|||+|||+ ..+
T Consensus 82 ~~~-~~~~~v~~---~~g---~i~ad~vI~A~G~~~~~--~--~~~g~~~~-~g~i~vd~~~~t~~~~i~a~GD~~-~~~ 148 (180)
T 2ywl_A 82 RDM-GGVFEVET---EEG---VEKAERLLLCTHKDPTL--P--SLLGLTRR-GAYIDTDEGGRTSYPRVYAAGVAR-GKV 148 (180)
T ss_dssp EEC-SSSEEEEC---SSC---EEEEEEEEECCTTCCHH--H--HHHTCCEE-TTEECCCTTCBCSSTTEEECGGGG-TCC
T ss_pred EEc-CCEEEEEE---CCC---EEEECEEEECCCCCCCc--c--ccCCCCcc-CceEEeCCCCCcCCCCEEEeeccc-Ccc
Confidence 876 34566665 245 69999999999999963 2 55678888 899999999999999999999999 665
Q ss_pred C-cHHHHHHHHHHHHHHHhC
Q psy14461 387 N-NASMAAISARLIIERLYG 405 (535)
Q Consensus 387 ~-~~~~A~~~g~~aa~~i~g 405 (535)
. +++.|..||++||.||.+
T Consensus 149 ~~~~~~A~~~g~~aa~~i~~ 168 (180)
T 2ywl_A 149 PGHAIISAGDGAYVAVHLVS 168 (180)
T ss_dssp SCCHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHhHHHHHHHHHH
Confidence 5 899999999999999986
No 91
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.84 E-value=3.4e-20 Score=200.13 Aligned_cols=290 Identities=12% Similarity=0.054 Sum_probs=171.4
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccccccc--ccccccccccch------hhcccccccccccccCHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKK--RRLYYPVAMSDL------ELEQDSTSALNVTIRNWNAA 160 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~--~l~~~~~~i~~~------~~~~~~~~~~~~~~~~~~~l 160 (535)
++|+|||+|++|+.+|..+...+.+|+|||+++.+++... ..|.....++.. ..+............+..++
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ei 89 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPEM 89 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHHH
Confidence 6899999999999999988888899999999876543210 011000000000 00000000111222344455
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCc--EEEEe-E---EEEecC-C--EEEEce-eEEEcceEEEeeC--ceecC-CCCC-C
Q psy14461 161 TKLIKRFCIRAKNDSMRELKALGI--DIVRT-A---AAFTNP-H--TIKLSN-RSVTGFNFLLAVE--RRCLP-EPRN-S 226 (535)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~gV--~~~~g-~---~~~~~~-~--~v~~~~-~~~~~d~lViATG--s~p~~-~i~G-~ 226 (535)
..+.+.. .++.++ .+..+ + +.+.+. . +|++.+ .++.||+||+||| ++|.. ++|| +
T Consensus 90 ~~yl~~~-----------~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~p~ipG~~ 158 (545)
T 3uox_A 90 LRYVNRA-----------ADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRMPDIKGID 158 (545)
T ss_dssp HHHHHHH-----------HHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---CCCTTGG
T ss_pred HHHHHHH-----------HHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcCCCCCCcc
Confidence 5444422 233333 22222 1 122221 2 555544 6899999999999 88888 8998 2
Q ss_pred -----ceechhhHHh-------ccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcC-CccCc----HHHHHHH-
Q psy14461 227 -----ALISADDLFR-------LGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRL-LKHFD----QEMVRIL- 287 (535)
Q Consensus 227 -----~v~~~~~~~~-------~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~-l~~~~----~~~~~~~- 287 (535)
.+++...... ....+|+|+|||+|.+|+|+|..|++.+.+||+++| +.+ +|..+ +...+.+
T Consensus 159 ~f~g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~ 238 (545)
T 3uox_A 159 SFKGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTPLGNSPMSKEKMDSLR 238 (545)
T ss_dssp GCCSEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCCCEECCCCBCCHHHHHHHH
T ss_pred ccCCCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCccccCCcCCCCHHHHHHHH
Confidence 2344433333 344579999999999999999999999999999999 763 44322 1111111
Q ss_pred --------------------------------------------------------------------------------
Q psy14461 288 -------------------------------------------------------------------------------- 287 (535)
Q Consensus 288 -------------------------------------------------------------------------------- 287 (535)
T Consensus 239 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 318 (545)
T 3uox_A 239 NRYPTILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLLLNKESNKFLADFVAKKIRQRVK 318 (545)
T ss_dssp HTHHHHHHHHTTSSSSSSCCCBSSCGGGSCHHHHHHHHHHHHHSSSTHHHHTSBTTTTTCHHHHHHHHHHHHHHHHHHCS
T ss_pred hhhHHHHHHHhhcccccccccccchhhhCCHHHHHHHHHHHHhhhhHHHHHhhhhhhhcCHHHHHHHHHHHHHHHHHHcC
Confidence
Q ss_pred --------------------------HHhhhcCCeEE-c--ceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEcc
Q psy14461 288 --------------------------LSSLTKAGVSI-Q--CCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAM 338 (535)
Q Consensus 288 --------------------------~~~l~~~gV~i-~--~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~ 338 (535)
.+.|.+.+|++ . ...|++|+.+ .|.+ .+| ++++|.||+||
T Consensus 319 d~~~~~~l~P~~~~~g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it~~-----gv~~---~dG---~~~~D~IV~AT 387 (545)
T 3uox_A 319 DPVVAEKLIPKDHPFGAKRVPMETNYYETYNRDNVHLVDIREAPIQEVTPE-----GIKT---ADA---AYDLDVIIYAT 387 (545)
T ss_dssp CHHHHHHTSCSSSCTTSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEETT-----EEEE---SSC---EEECSEEEECC
T ss_pred CHHHHHhCCCCCCCCCCCccCCCccHHHHhcCCCEEEEecCCCCceEEccC-----eEEe---CCC---eeecCEEEECC
Confidence 01122337777 4 7788888743 2555 366 58999999999
Q ss_pred CCCCCCCCCCccccCeeecCCCceEcCCC-----------CCcCCCCEEEeCCcCC--CCCCcHHHHHHHHHHHHHHHh
Q psy14461 339 EKKFDFAALNLHHIGVDIKKKSYVVCNEK-----------DQTSVGNIFAVGGIVH--GKPNNASMAAISARLIIERLY 404 (535)
Q Consensus 339 G~~p~~~~l~l~~~gl~~~~~G~i~vd~~-----------~~T~~~~IyA~GD~~~--~~~~~~~~A~~~g~~aa~~i~ 404 (535)
|+.+++.++ ....+. +.+| ..+++. +-.+.||+|.+.--.. +.......+..|++.+++.|.
T Consensus 388 Gf~~~~~~~--~~~~i~-g~~G-~~l~~~w~~~~~~y~g~~~~gfPN~f~~~gp~~~~~~~s~~~~~e~~~~~i~~~i~ 462 (545)
T 3uox_A 388 GFDAVTGSL--DRIDIR-GKDN-VRLIDAWAEGPSTYLGLQARGFPNFFTLVGPHNGSTFCNVGVCGGLQAEWVLRMIS 462 (545)
T ss_dssp CCBSSSCSC--TTSEEE-CGGG-CBHHHHTTTSCCCBTTTBCTTCTTEEECSSGGGTGGGSCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccC--CCceEE-CCCC-ccHHHhhccccceeeccccCCCCcEEEEeCCCCCCccccHHHHHHHHHHHHHHHHH
Confidence 999987655 222221 2233 333321 1237899999854331 123556678999999998885
No 92
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.82 E-value=4.5e-19 Score=191.57 Aligned_cols=179 Identities=7% Similarity=-0.037 Sum_probs=110.6
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccc---------cccccccccccchhhcccccccccccccCHH
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRK---------KRRLYYPVAMSDLELEQDSTSALNVTIRNWN 158 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~---------~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 158 (535)
.++|+|||+|++|+.+|..+...+.+|+|||+++.+++.. +..+...+..+ ................+..
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~-f~~~~~~~~~~~~~~~~~~ 99 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYS-FSPELEQEWNWSEKYATQP 99 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCC-SCHHHHHHCCCSSSSCBHH
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccc-cccccccCCCCccCCCCHH
Confidence 4789999999999999998888889999999987654211 11111100000 0000000000111223444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCc--EEEEe-EEEEe--cCC----EEEEce-eEEEcceEEEeeC--ceecC-CCCC
Q psy14461 159 AATKLIKRFCIRAKNDSMRELKALGI--DIVRT-AAAFT--NPH----TIKLSN-RSVTGFNFLLAVE--RRCLP-EPRN 225 (535)
Q Consensus 159 ~l~~~~~~~~~~~~~~~~~~~~~~gV--~~~~g-~~~~~--~~~----~v~~~~-~~~~~d~lViATG--s~p~~-~i~G 225 (535)
++..+.. ...++.++ ++..+ ++... +.. +|++.+ .++.||+||+||| ++|.. ++||
T Consensus 100 ei~~yl~-----------~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG 168 (549)
T 4ap3_A 100 EILAYLE-----------HVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANTPAFDG 168 (549)
T ss_dssp HHHHHHH-----------HHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCCCCCTT
T ss_pred HHHHHHH-----------HHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCC
Confidence 4444443 33444454 34333 22221 222 565544 5799999999999 88888 8999
Q ss_pred -C----ceechhhHH--hccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcC-Ccc
Q psy14461 226 -S----ALISADDLF--RLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRL-LKH 278 (535)
Q Consensus 226 -~----~v~~~~~~~--~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~-l~~ 278 (535)
+ .+++..... .....+|+|+|||+|.+|+|+|..|++.+.+||+++| +.+ +|.
T Consensus 169 ~~~f~g~~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ilp~ 230 (549)
T 4ap3_A 169 LDRFTGDIVHTARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANYSIPA 230 (549)
T ss_dssp GGGCCSEEEEGGGCCTTCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEEC
T ss_pred cccCCCceEEeccccccccccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccC
Confidence 2 233333222 2334579999999999999999999999999999999 763 443
No 93
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.79 E-value=3.8e-18 Score=184.47 Aligned_cols=295 Identities=11% Similarity=0.041 Sum_probs=172.4
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccccccc--ccccccccccchhh--cccc----cccccccccCHHH
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKK--RRLYYPVAMSDLEL--EQDS----TSALNVTIRNWNA 159 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~--~l~~~~~~i~~~~~--~~~~----~~~~~~~~~~~~~ 159 (535)
.++|+|||+|++|+.+|+.+...+.+|+|||+++.+++... ..|..........- .+.+ .........+..+
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 95 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPE 95 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHH
Confidence 57899999999999999988888899999999886542210 01100000000000 0000 0000111233444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcEEEEeE----EEEecC-C--EEEEce-eEEEcceEEEeeC--ceecC-CCCC-C-
Q psy14461 160 ATKLIKRFCIRAKNDSMRELKALGIDIVRTA----AAFTNP-H--TIKLSN-RSVTGFNFLLAVE--RRCLP-EPRN-S- 226 (535)
Q Consensus 160 l~~~~~~~~~~~~~~~~~~~~~~gV~~~~g~----~~~~~~-~--~v~~~~-~~~~~d~lViATG--s~p~~-~i~G-~- 226 (535)
+.++.+...+++. .++++..++ +.+.+. . +|++.+ .++.||+||+||| +.|.. ++|| +
T Consensus 96 i~~yl~~~~~~~~---------l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~~p~i~G~~~ 166 (542)
T 1w4x_A 96 ILRYINFVADKFD---------LRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPNFPGLKD 166 (542)
T ss_dssp HHHHHHHHHHHTT---------GGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCCCCCCTTGGG
T ss_pred HHHHHHHHHHHcC---------CCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCCccc
Confidence 4444433222221 012233221 222222 2 455543 5799999999999 56776 7888 2
Q ss_pred --c--eechhhHHh-ccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcC-CccC----cHHHHHH---------
Q psy14461 227 --A--LISADDLFR-LGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRL-LKHF----DQEMVRI--------- 286 (535)
Q Consensus 227 --~--v~~~~~~~~-~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~-l~~~----~~~~~~~--------- 286 (535)
+ +++...... ....+|+|+|||+|.+|+|+|..|++.+.+|+++.| +.+ +|.. .++..+.
T Consensus 167 f~G~~~hs~~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~~~~~~~~~~~~~~~~p~l~ 246 (542)
T 1w4x_A 167 FAGNLYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPLDPEFLADLKKRYAEFR 246 (542)
T ss_dssp CCSEEEEGGGCCSSCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCCCBCCHHHHHHHHTTHHHHH
T ss_pred CCCceEECCCCCCchhccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCCCCCCHHHHHHHHhhCHHHH
Confidence 1 333321111 233579999999999999999999999999999998 655 2321 1111100
Q ss_pred --------------------------------------------------------------HHH---------------
Q psy14461 287 --------------------------------------------------------------LLS--------------- 289 (535)
Q Consensus 287 --------------------------------------------------------------~~~--------------- 289 (535)
+++
T Consensus 247 ~~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 326 (542)
T 1w4x_A 247 EESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVRDPEVAERL 326 (542)
T ss_dssp HHHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHHHHHHHHHHCSSHHHHHHH
T ss_pred HHHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHcCCHHHHHhc
Confidence 000
Q ss_pred --------------------hhhcCCeEEc---ceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 290 --------------------SLTKAGVSIQ---CCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 290 --------------------~l~~~gV~i~---~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
.+.+.+|++. +..|++|+.+ .|.+. | + ++++|.||+|||+++++.+
T Consensus 327 ~P~~~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~~-----gv~~~---d-~--~~~~D~ii~atG~~~~~~~ 395 (542)
T 1w4x_A 327 VPKGYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPR-----GVRTS---E-R--EYELDSLVLATGFDALTGA 395 (542)
T ss_dssp SCCSSCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECSS-----EEEES---S-C--EEECSEEEECCCCCCTTHH
T ss_pred CCCCCCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEcCC-----eEEeC---C-e--EEecCEEEEcCCccccccC
Confidence 0112345552 5567776532 25552 5 5 8999999999999998765
Q ss_pred CCccccCeeecCCCceEcC-------CC--CC-cCCCCEEEe-CCcCC-CCCCcHHHHHHHHHHHHHHHhC
Q psy14461 347 LNLHHIGVDIKKKSYVVCN-------EK--DQ-TSVGNIFAV-GGIVH-GKPNNASMAAISARLIIERLYG 405 (535)
Q Consensus 347 l~l~~~gl~~~~~G~i~vd-------~~--~~-T~~~~IyA~-GD~~~-~~~~~~~~A~~~g~~aa~~i~g 405 (535)
+ ...++. +.+|....+ .+ +. ...||+|++ |+.+. +.+.....|..|++.+|++|..
T Consensus 396 ~--~~~~i~-g~~G~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~~~~~~~~~e~q~~~ia~~i~~ 463 (542)
T 1w4x_A 396 L--FKIDIR-GVGNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQHVEWVTDHIAY 463 (542)
T ss_dssp H--HTSEEE-CGGGCBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred c--CceeeE-CCCCCCHHHhhcCchheecccccCCCCceEEEcCCCCCcccccHHHHHHHHHHHHHHHHHH
Confidence 4 333332 234533332 12 22 378999998 99852 3455668899999999999974
No 94
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.72 E-value=8.3e-16 Score=164.44 Aligned_cols=200 Identities=13% Similarity=0.058 Sum_probs=126.2
Q ss_pred eEEEcceEEEeeCceecC-CCCC--CceechhhHHh-------ccCCCCcEEEECCChHHHHHHHHHHhC--CCcEEEEE
Q psy14461 204 RSVTGFNFLLAVERRCLP-EPRN--SALISADDLFR-------LGAWPGKTLVLGGSLMAVEIAATLNFL--GVPVTLVY 271 (535)
Q Consensus 204 ~~~~~d~lViATGs~p~~-~i~G--~~v~~~~~~~~-------~~~~~k~vvViGgG~~g~e~A~~l~~~--g~~Vtlv~ 271 (535)
.++.+++||+|||..|.. +.++ ..++++.++.. ....+|+|+|||+|.+|+|++..|++. +.+|+++.
T Consensus 199 ~~~~ar~vVlatG~~P~iP~~~~~~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~ 278 (501)
T 4b63_A 199 SARRTRKVVIAIGGTAKMPSGLPQDPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIM 278 (501)
T ss_dssp EEEEEEEEEECCCCEECCCTTSCCCTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEEC
T ss_pred EEEEeCEEEECcCCCCCCCCCCCCCcceeeccccccchhhccccccCCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEe
Confidence 568999999999999977 4443 45666655543 123578999999999999999999865 68999999
Q ss_pred c-CcCCcc---------CcHH-----------HHH--------------------HHHHhhh----------cCCeEE-c
Q psy14461 272 S-RRLLKH---------FDQE-----------MVR--------------------ILLSSLT----------KAGVSI-Q 299 (535)
Q Consensus 272 ~-~~~l~~---------~~~~-----------~~~--------------------~~~~~l~----------~~gV~i-~ 299 (535)
| +.+.|. +.++ ... .+.+.+. .....+ .
T Consensus 279 R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~~~~~~~~~~~~~~~l~~ 358 (501)
T 4b63_A 279 RDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDMYLQRVKNPDETQWQHRILP 358 (501)
T ss_dssp SSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCSCGGGCSSEEEC
T ss_pred CCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHHhhccCCCcccccceeecC
Confidence 8 655432 1111 111 1111110 112345 6
Q ss_pred ceEEEEEEEeC-CCcEEEEEec---------CCCCCceEEEcCEEEEccCCCCCCCC-CCccccCeeecCCCceEcCCCC
Q psy14461 300 CCVIEKVISSF-DGMKGVRGFH---------PESKEPFADVFKTVVNAMEKKFDFAA-LNLHHIGVDIKKKSYVVCNEKD 368 (535)
Q Consensus 300 ~~~v~~i~~~~-~~~~~v~~~~---------~~~G~~~~~~~D~vi~a~G~~p~~~~-l~l~~~gl~~~~~G~i~vd~~~ 368 (535)
+..+..+.... .+.+.+.... ..+|+ ++++|.||+|||++|+... |.-....+..|.+|.+.|+..+
T Consensus 359 ~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~--~~~~D~VI~ATGy~~~~p~~L~~~~~~l~~d~~g~~~v~rdy 436 (501)
T 4b63_A 359 ERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKE--TLEVDALMVATGYNRNAHERLLSKVQHLRPTGQDQWKPHRDY 436 (501)
T ss_dssp SEEEEEEECCSSSSCEEEEEEESCC--------CCC--EEEESEEEECCCEECCTHHHHTGGGGGGSSTTCCSCCBCTTS
T ss_pred CcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCe--EEECCEEEECcCCCCCCcchhcchhhhcCcCcCCCeeeCCCc
Confidence 66776665431 2334443321 13566 8999999999999998642 1001113556777888888765
Q ss_pred Cc--------CCCCEEEeCCcCC----CCCCcHHHHHHHHHHHHHHHhCC
Q psy14461 369 QT--------SVGNIFAVGGIVH----GKPNNASMAAISARLIIERLYGM 406 (535)
Q Consensus 369 ~T--------~~~~IyA~GD~~~----~~~~~~~~A~~~g~~aa~~i~g~ 406 (535)
+. ..++||+.|-+.+ +.+.+...|.+.|+++ +.|+|+
T Consensus 437 ~~~~~~~~~~~~~~i~~qg~~~~thG~~~~~Ls~~a~R~~~I~-~~l~g~ 485 (501)
T 4b63_A 437 RVEMDPSKVSSEAGIWLQGCNERTHGLSDSLLSVLAVRGGEMV-QSIFGE 485 (501)
T ss_dssp BBCCCTTTBCTTCEEEECSCCHHHHCTTTTSSTTHHHHHHHHH-HHHHHH
T ss_pred EEeecCCccCCCceEEecCCCcccCCcchhhHHHHHHHHHHHH-HHHhcc
Confidence 42 2467999995432 3466777899988765 556664
No 95
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.54 E-value=1.7e-15 Score=160.88 Aligned_cols=206 Identities=11% Similarity=0.075 Sum_probs=122.8
Q ss_pred HHHHHHhcCcEEEEeE-EEE-ecCCEE---EE--ceeEEEcceEEEeeCceecC-CCCC-CceechhhHH----------
Q psy14461 175 SMRELKALGIDIVRTA-AAF-TNPHTI---KL--SNRSVTGFNFLLAVERRCLP-EPRN-SALISADDLF---------- 235 (535)
Q Consensus 175 ~~~~~~~~gV~~~~g~-~~~-~~~~~v---~~--~~~~~~~d~lViATGs~p~~-~i~G-~~v~~~~~~~---------- 235 (535)
+.+.++..||+++.++ +.+ .++..+ .+ .+.++.+|.||+|||+.+.. +++. +...+.+.+.
T Consensus 125 L~~~~~~~gv~i~~~~~v~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~~~~~~~~~~~~tGdgi~~a~~aGa~~~ 204 (472)
T 2e5v_A 125 LLKLAREEGIPIIEDRLVEIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSYLYEYSSTQSTNIGDGMAIAFKAGTILA 204 (472)
T ss_dssp HHHHHHHTTCCEECCCEEEEEEETTEEEEEEETTTEEECCCSEEEECCCCCGGGSSSBSSCTTCSCHHHHHHHHTTCCEE
T ss_pred HHHHHHhCCCEEEECcEEEEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcccCccccCCCCCchHHHHHHHHcCCCEe
Confidence 3344566799998775 422 234443 34 23567899999999998766 5432 2223333321
Q ss_pred hccCCC--CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHH--------HHHHHHhhhcCCeEEcceEEE
Q psy14461 236 RLGAWP--GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEM--------VRILLSSLTKAGVSIQCCVIE 304 (535)
Q Consensus 236 ~~~~~~--k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~--------~~~~~~~l~~~gV~i~~~~v~ 304 (535)
.+.... ..++++|+| +++++..++..|..+ +..+ +++++.++++. ...+.+.+++.|.-+.+.+
T Consensus 205 d~e~~q~~p~~~~~ggg--~~~~ae~~~~~G~~~-v~~~g~rf~~~~~~~~el~~rd~v~~~i~~~~~~~~~v~ld~~-- 279 (472)
T 2e5v_A 205 DMEFVQFHPTVTSLDGE--VFLLTETLRGEGAQI-INENGERFLFNYDKRGELAPRDILSRAIYIEMLKGHKVFIDLS-- 279 (472)
T ss_dssp CTTCEEEEEEEECGGGC--CEECCTHHHHTTCEE-EETTCCCGGGGTCTTGGGSCHHHHHHHHHHHHHHTCCEEEECT--
T ss_pred CCcceEEEeEEEccCCC--ceeeehhhcCCceEE-ECCCCCCCCccCCcccCcCchhHHHHHHHHHHHhCCcEEEecc--
Confidence 111111 134556776 888999999999877 6666 88886555432 5555666655442111100
Q ss_pred EEEEeCCCcEEEEEecCCCCCceEEE-cCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCC
Q psy14461 305 KVISSFDGMKGVRGFHPESKEPFADV-FKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVH 383 (535)
Q Consensus 305 ~i~~~~~~~~~v~~~~~~~G~~~~~~-~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~ 383 (535)
.. +. +. ..++ .|.++++.|..|+ +.+.. .+......|.|.||+++||++|||||+|||+
T Consensus 280 ---~~-~~-----~~-------~~~~~~~~~~~~~G~dp~-~~i~v--~p~~~~~~GGI~vd~~~~t~ipgLyAaGd~a- 339 (472)
T 2e5v_A 280 ---KI-ED-----FE-------RKFPVVAKYLARHGHNYK-VKIPI--FPAAHFVDGGIRVNIRGESNIVNLYAIGEVS- 339 (472)
T ss_dssp ---TC-TT-----HH-------HHCHHHHHHHHHTTCCTT-SCEEC--EEEEEEESCEEECCTTCBCSSBTEEECGGGE-
T ss_pred ---ch-HH-----HH-------HHhHHHHHHHHHhCcCcc-cceEe--ehhhceeCCCeEECCCCccccCCEEecchhc-
Confidence 00 00 10 0233 4667888999999 65522 2222233688999999999999999999998
Q ss_pred C-CC----CcHHHHHHH----HHHHHHHHhC
Q psy14461 384 G-KP----NNASMAAIS----ARLIIERLYG 405 (535)
Q Consensus 384 ~-~~----~~~~~A~~~----g~~aa~~i~g 405 (535)
+ +. .+...|..+ |+.|++++.+
T Consensus 340 ~~~~hg~~rl~~~sl~~~~v~G~~a~~~~a~ 370 (472)
T 2e5v_A 340 DSGLHGANRLASNSLLEGLVFGINLPRYVDS 370 (472)
T ss_dssp ECSSSTTSCCTTHHHHHHHHHHHHGGGTTTS
T ss_pred ccccCCCCCCCcccHHHHHHHHHHHHHHHHh
Confidence 4 22 466666665 5555555554
No 96
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.49 E-value=1.2e-13 Score=132.36 Aligned_cols=156 Identities=17% Similarity=0.122 Sum_probs=107.8
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcC-----------------CccC-------cHHHHHHHHHhhhcC-C
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRL-----------------LKHF-------DQEMVRILLSSLTKA-G 295 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~-----------------l~~~-------~~~~~~~~~~~l~~~-g 295 (535)
-+|+|||||++|+++|..|++.|.+|+++++ ... +..+ ..++.+.+.+.+++. |
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~~g 83 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGLRP 83 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTCTT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcCCC
Confidence 4799999999999999999999999999998 321 1111 236677788888886 9
Q ss_pred eEEcceEEEEEEEeCCCcE-EEEEecCCCCCceEEEcCEEEEccCCCCCCCCC-C--------------------ccccC
Q psy14461 296 VSIQCCVIEKVISSFDGMK-GVRGFHPESKEPFADVFKTVVNAMEKKFDFAAL-N--------------------LHHIG 353 (535)
Q Consensus 296 V~i~~~~v~~i~~~~~~~~-~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l-~--------------------l~~~g 353 (535)
+++.+.+++++..+ ++.+ .|.+ .+|+ ++++|.||+|+|..++.... + +...+
T Consensus 84 v~i~~~~v~~i~~~-~~~v~~v~~---~~g~--~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~~~l~~~g 157 (232)
T 2cul_A 84 LHLFQATATGLLLE-GNRVVGVRT---WEGP--PARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLLEDLSRLG 157 (232)
T ss_dssp EEEEECCEEEEEEE-TTEEEEEEE---TTSC--CEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHHHHHHHTT
T ss_pred cEEEEeEEEEEEEe-CCEEEEEEE---CCCC--EEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhCHHHHhCC
Confidence 99933589999876 4544 4555 3676 79999999999995543210 0 01222
Q ss_pred eeecCC--------Cc-------eEcC-------CCCCcCCCCEEEeCCcCCCCCCcHHHHHHHHHHHHHHHhC
Q psy14461 354 VDIKKK--------SY-------VVCN-------EKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYG 405 (535)
Q Consensus 354 l~~~~~--------G~-------i~vd-------~~~~T~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g 405 (535)
++++.. |. ..+. ....|+.|+|||+|||+ . ......|+.||+.+|.+|..
T Consensus 158 ~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~-~g~~~~~~~~g~~~a~~i~~ 229 (232)
T 2cul_A 158 FRFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-R-EGDYARMSEEGKRLAEHLLH 229 (232)
T ss_dssp CCEEEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-S-CCCHHHHHHHHHHHHHHHHH
T ss_pred CeEEccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-c-CccHHHHHHHHHHHHHHHHh
Confidence 222210 00 0011 01137999999999999 4 44777899999999999974
No 97
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.39 E-value=7.3e-16 Score=155.71 Aligned_cols=241 Identities=15% Similarity=-0.023 Sum_probs=141.3
Q ss_pred EEEEEeeCCccHHHHHHHHHh--hCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHH
Q psy14461 88 VLYLDRIGDEGILLEEELKRQ--TNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIK 165 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~--~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 165 (535)
..||+|||+||+|+.+|+++. +.+.+|+|||+++.+++... ...+ -++. ..++
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~-~~~~--~~~~-------------~~l~--------- 119 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW-LGGQ--LFSA-------------MVMR--------- 119 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTT-CCST--TCCC-------------EEEE---------
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEE-eCCc--cCCH-------------HHHH---------
Confidence 578999999999999998764 45899999999987654321 1111 0111 0111
Q ss_pred HHHHHHHHHHHHHHHhcCcEEEEeEEEEecCCEEEEceeEEEcceEEEeeCceecC-CCCCCcee---chhhHHh---cc
Q psy14461 166 RFCIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLSNRSVTGFNFLLAVERRCLP-EPRNSALI---SADDLFR---LG 238 (535)
Q Consensus 166 ~~~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~~~~~~~d~lViATGs~p~~-~i~G~~v~---~~~~~~~---~~ 238 (535)
......+++.|+++.... ......+.++++++..++. +++|...+ ...++.. ..
T Consensus 120 -------~~~~~~~~e~Gv~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 180 (326)
T 3fpz_A 120 -------KPAHLFLQELEIPYEDEG------------DYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTE 180 (326)
T ss_dssp -------TTTHHHHHHTTCCCEECS------------SEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEEESSCS
T ss_pred -------HHHHHHHHHcCCEEEECC------------cceecceeEEEEcchhhhccccccceeecccccceeeccCCcc
Confidence 011234566788755421 1234455667778877777 88881111 1111111 12
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEEcceEEEEEEEeCCCcEEEE
Q psy14461 239 AWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSIQCCVIEKVISSFDGMKGVR 317 (535)
Q Consensus 239 ~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i~~~~v~~i~~~~~~~~~v~ 317 (535)
...++++|+|+|.++++.|..+.+.+.+++++.+ ........ +... ...+....+. ++....
T Consensus 181 ~~~~~v~viggg~~av~~a~~~~~~~~~v~i~~~~~~~~~~~~----------~~~~-----~~~~~~~~g~-~~~~~~- 243 (326)
T 3fpz_A 181 KGEVTVAGVVTNWTLVTQAHGTQCAMDPNVIELAGYKNDGTRD----------LSQK-----HGVILSTTGH-DGPFGA- 243 (326)
T ss_dssp SSSCEEEEEEEEEHHHHTCTTSSSCCCCEEEEESCBCTTSSBC----------TTSC-----CCEEEECCCS-CSSSCS-
T ss_pred cCCCEEEEEccCceeeehhhhhhhccCcEEEEeeccccccccc----------ceee-----cceEEEEecc-eeeEee-
Confidence 3468999999999999999999999999999987 43322110 0000 0111111111 110000
Q ss_pred EecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCeeecCCCceEcCCCCCcCCCCEEEeCCcCC---CCCC---cHHH
Q psy14461 318 GFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVH---GKPN---NASM 391 (535)
Q Consensus 318 ~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~~---~~~~---~~~~ 391 (535)
.+.+..+++|.++.+.|.+|.. +++. .+.|.+|+.++|++|||||+||++. +.+. ....
T Consensus 244 -----~~~~~~~~~~~~~~~~g~~~~~---------~~~~-e~~iv~~~~~~t~vpGv~aaGDaa~~v~g~~rmGp~~g~ 308 (326)
T 3fpz_A 244 -----FCAKRIVDIDQNQKLGGMKGLD---------MNHA-EHDVVIHSGAYAGVDNMYFAGMEVAELDGLNRMGPTFGA 308 (326)
T ss_dssp -----HHHHHHHHHCTTCCCCCCCCBC---------HHHH-HHHHHHHCEECTTSBTEEECTHHHHHHHTCCBCCSCCHH
T ss_pred -----cceeEEEecCceeeecceeccc---------cccc-CCeEEECCCeEECCCCEEEEchHhccccCCCcCchHHHH
Confidence 1111234556666666665532 2222 3568888899999999999999873 1111 2234
Q ss_pred HHHHHHHHHHHHh
Q psy14461 392 AAISARLIIERLY 404 (535)
Q Consensus 392 A~~~g~~aa~~i~ 404 (535)
++..|+.||+.|+
T Consensus 309 mi~SG~~AAe~I~ 321 (326)
T 3fpz_A 309 MALSGVHAAEQIL 321 (326)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5778999999886
No 98
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.29 E-value=9.2e-13 Score=136.74 Aligned_cols=187 Identities=10% Similarity=-0.001 Sum_probs=100.0
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccc-------cccccccccccccchhhcccccccccccccCHHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSF-------RKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAAT 161 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~-------~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~ 161 (535)
++|+|||+|++|+.+|+.+...+.+|+|+|+++.++. ..|.+..............+.+........+..++.
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDFI 84 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHHH
Confidence 5789999999999999999888999999999875421 111111000000000000000000000000111111
Q ss_pred HHHHH-----------------HHHHHHHHHHHHHHhcCcEEEEeEEE--Ee-c----CCE--EEEceeEEEcceEEEee
Q psy14461 162 KLIKR-----------------FCIRAKNDSMRELKALGIDIVRTAAA--FT-N----PHT--IKLSNRSVTGFNFLLAV 215 (535)
Q Consensus 162 ~~~~~-----------------~~~~~~~~~~~~~~~~gV~~~~g~~~--~~-~----~~~--v~~~~~~~~~d~lViAT 215 (535)
++..+ ....+...+...+++.||+++.++.. +. + +.. |.+.+.++.+|+||+||
T Consensus 85 ~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g~i~ad~VVlAt 164 (401)
T 2gqf_A 85 SLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNSTQWQCKNLIVAT 164 (401)
T ss_dssp HHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTEEEEESEEEECC
T ss_pred HHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCCEEECCEEEECC
Confidence 11110 01222233445667789999887532 22 3 333 33344579999999999
Q ss_pred CceecC---------------------CCCC-Cce-echhh-H---HhccCCCCcEEEEC---------------CChHH
Q psy14461 216 ERRCLP---------------------EPRN-SAL-ISADD-L---FRLGAWPGKTLVLG---------------GSLMA 253 (535)
Q Consensus 216 Gs~p~~---------------------~i~G-~~v-~~~~~-~---~~~~~~~k~vvViG---------------gG~~g 253 (535)
|+.+.. +.|+ ..+ ++..+ + +.....+.++.|+| +|+++
T Consensus 165 G~~s~p~~g~~G~g~~la~~~G~~i~~~~p~l~~~~~~~~~~~~~~l~g~~~~~~~~i~G~~~~~g~~l~t~~g~sG~~~ 244 (401)
T 2gqf_A 165 GGLSMPGLGATPFGYQIAEQFGIPVIPPRASLVPFTYRETDKFLTALSGISLPVTITALCGKSFYNQLLFTHRGISGPAV 244 (401)
T ss_dssp CCSSCGGGTCCSHHHHHHHHTTCCEEEEEEESCCEECCGGGGGGGGGTTCEEEEEEEETTSCEEEEEEEECSSEEESHHH
T ss_pred CCccCCCCCCChHHHHHHHHCCCCcccCcceeeceecCCchhhcccCCCeeeeeEEEEcCCceEEeCEEEECCCccHHHH
Confidence 987721 1233 112 23333 3 22223355666669 89999
Q ss_pred HHHHHHHHhCCCcEEEEEcCcCCccCc
Q psy14461 254 VEIAATLNFLGVPVTLVYSRRLLKHFD 280 (535)
Q Consensus 254 ~e~A~~l~~~g~~Vtlv~~~~~l~~~~ 280 (535)
++++..+++ |.+|++ .++|.++
T Consensus 245 l~~s~~~~~-~~~~~i----~~~p~~~ 266 (401)
T 2gqf_A 245 LQISNYWQP-TESVEI----DLLPNHN 266 (401)
T ss_dssp HHHTTTCCT-TCCEEE----ESCSSSC
T ss_pred HHHHHHHhc-CCEEEE----ECCCCCC
Confidence 999998866 777775 3455544
No 99
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.22 E-value=4e-11 Score=118.47 Aligned_cols=161 Identities=17% Similarity=0.134 Sum_probs=108.8
Q ss_pred CcEEEECCChHHHHHHHHHHhC-CCcEEEEEc-CcCCcc--------------------------------------CcH
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFL-GVPVTLVYS-RRLLKH--------------------------------------FDQ 281 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~-~~~l~~--------------------------------------~~~ 281 (535)
.+|+|||||++|+.+|..|++. |.+|+++++ +.+... ...
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 119 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAA 119 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCHH
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCHH
Confidence 4799999999999999999997 999999998 644210 124
Q ss_pred HHHHHHHHhhhc-CCeEE-cceEEEEEEEeCCCcE-EEEEec------CCC---CCceEEEcCEEEEccCCCCCCCCCCc
Q psy14461 282 EMVRILLSSLTK-AGVSI-QCCVIEKVISSFDGMK-GVRGFH------PES---KEPFADVFKTVVNAMEKKFDFAALNL 349 (535)
Q Consensus 282 ~~~~~~~~~l~~-~gV~i-~~~~v~~i~~~~~~~~-~v~~~~------~~~---G~~~~~~~D~vi~a~G~~p~~~~l~l 349 (535)
++...+.+.+.+ .||++ .+++++++..+ ++++ .|.+.. ..+ |+..++++|.||+|+|..++...+..
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~-~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~~ 198 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGV 198 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEEE-TTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHHH
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEec-CCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHHH
Confidence 455556666654 79999 99999999876 4544 344421 001 34458999999999998887543211
Q ss_pred cc-------cCeeecCCCceEcCC-------CCCcCCCCEEEeCCcCC---CCCC---cHHHHHHHHHHHHHHHhC
Q psy14461 350 HH-------IGVDIKKKSYVVCNE-------KDQTSVGNIFAVGGIVH---GKPN---NASMAAISARLIIERLYG 405 (535)
Q Consensus 350 ~~-------~gl~~~~~G~i~vd~-------~~~T~~~~IyA~GD~~~---~~~~---~~~~A~~~g~~aa~~i~g 405 (535)
.. .++... +| +.++. ..+|+.|++|++||++. +.+. ....|..+|+.+|.+|..
T Consensus 199 ~~~~~~g~~~~v~~~-~g-~~~~~~~~~~v~~~~~~~p~i~a~G~~~~~~~g~~~~gp~~~~~~~sG~~~a~~i~~ 272 (284)
T 1rp0_A 199 KRLKSIGMIDHVPGM-KA-LDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALK 272 (284)
T ss_dssp HHHHHTTSSSCCCCC-EE-ECHHHHHHHHHHHCEEEETTEEECTHHHHHHHTCEECCSCCHHHHHHHHHHHHHHHH
T ss_pred HHhhhccCCCCcCCc-CC-chhhhhhHHHhhccccccCCEEEEeeehhhhcCCCCcChHHHHHHHhHHHHHHHHHH
Confidence 10 111111 22 33331 34577899999999874 2222 345788999999999974
No 100
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.11 E-value=4.2e-10 Score=121.80 Aligned_cols=157 Identities=11% Similarity=-0.041 Sum_probs=90.8
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCC-cccccccccccc---cccccchhhcccc------------ccccc-
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGS-HLSFRKKRRLYY---PVAMSDLELEQDS------------TSALN- 151 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~-~~~~~~~~l~~~---~~~i~~~~~~~~~------------~~~~~- 151 (535)
++|+|||+|++|+.+|+.+...+.+|+|+|++. .++...|..... ...+......+.+ +..+.
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~~ 108 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNA 108 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhhc
Confidence 789999999999999999988999999999984 333222211000 0000000000000 00000
Q ss_pred ---------ccccCHHHHHHHHHHHHHHHHHHHHHHHHh-cCcEEEEeEEEEe--cCCE---EEEc-eeEEEcceEEEee
Q psy14461 152 ---------VTIRNWNAATKLIKRFCIRAKNDSMRELKA-LGIDIVRTAAAFT--NPHT---IKLS-NRSVTGFNFLLAV 215 (535)
Q Consensus 152 ---------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~gV~~~~g~~~~~--~~~~---v~~~-~~~~~~d~lViAT 215 (535)
....|... +...+...+++ .|++++.+++..+ ++.. |.+. +.++.+|.||+||
T Consensus 109 ~kgpav~~~r~~~Dr~~-----------~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLAT 177 (651)
T 3ces_A 109 SKGPAVRATRAQADRVL-----------YRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTV 177 (651)
T ss_dssp TSCGGGCEEEEEECHHH-----------HHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTSEEEEEEEEEECC
T ss_pred ccCcccccchhhCCHHH-----------HHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcC
Confidence 00112111 22233455666 6999988777665 3443 3343 3679999999999
Q ss_pred CceecC-CCCC-CceechhhHHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEE
Q psy14461 216 ERRCLP-EPRN-SALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVY 271 (535)
Q Consensus 216 Gs~p~~-~i~G-~~v~~~~~~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~ 271 (535)
|+.+.. .++| .. + .+.+ +| |.+++++|..|+++|.+|+.+.
T Consensus 178 Gt~s~~~~i~G~~~-~----------~~gr---iG-g~~a~eLA~~L~~lG~~v~~~~ 220 (651)
T 3ces_A 178 GTFLDGKIHIGLDN-Y----------SGGR---AG-DPPSIPLSRRLRELPLRVGRLK 220 (651)
T ss_dssp STTTCCEEECC----------------------------CCHHHHHHHTTTCCEEEEC
T ss_pred CCCccCccccCccc-C----------CCCC---cc-chhhhHHHHHHHhcCCeEEEec
Confidence 998877 6777 21 0 1233 56 8899999999999999999884
No 101
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.87 E-value=1.2e-07 Score=102.27 Aligned_cols=158 Identities=7% Similarity=-0.047 Sum_probs=93.0
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCC-cccccccccccc---cccccchhhccccc------------cccc-
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGS-HLSFRKKRRLYY---PVAMSDLELEQDST------------SALN- 151 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~-~~~~~~~~l~~~---~~~i~~~~~~~~~~------------~~~~- 151 (535)
++|+|||+|++|+.+|+.+...+.+|+|+|++. .++...|..... ...+..+...+.+. ..+.
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~~ 107 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLNT 107 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeeccc
Confidence 578999999999999999988899999999984 333222211000 00000000000000 0000
Q ss_pred ---------ccccCHHHHHHHHHHHHHHHHHHHHHHHHh-cCcEEEEeEEEEe--cCCE---EEEc-eeEEEcceEEEee
Q psy14461 152 ---------VTIRNWNAATKLIKRFCIRAKNDSMRELKA-LGIDIVRTAAAFT--NPHT---IKLS-NRSVTGFNFLLAV 215 (535)
Q Consensus 152 ---------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~gV~~~~g~~~~~--~~~~---v~~~-~~~~~~d~lViAT 215 (535)
....|... +...+.+.+++ .||+++.+.+..+ ++.. |.+. +..+.+|.||+||
T Consensus 108 ~kGpav~~~r~~~Dr~~-----------~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLAT 176 (637)
T 2zxi_A 108 RKGKAVQSPRAQADKKR-----------YREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTT 176 (637)
T ss_dssp TSCGGGCEEEEEECHHH-----------HHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTSCEEECSEEEECC
T ss_pred ccCccccchhhhCCHHH-----------HHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEcc
Confidence 00112211 22233455666 5999987777653 3343 3343 3679999999999
Q ss_pred CceecC-CCCCCceechhhHHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEE
Q psy14461 216 ERRCLP-EPRNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVY 271 (535)
Q Consensus 216 Gs~p~~-~i~G~~v~~~~~~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~ 271 (535)
|+.+.. .++|...+. +.+ .|+.+++++|..|.++|.+++.+.
T Consensus 177 G~~s~~~~~~G~~~~~----------~Gr----~G~~~A~~la~~L~~lG~~v~~l~ 219 (637)
T 2zxi_A 177 GTFLNGVIYIGDKMIP----------GGR----LGEPRSEGLSDFYRRFDFPLIRFK 219 (637)
T ss_dssp TTCBTCEEEETTEEEE----------CSB----TTBCCBCTHHHHHHHTTCCCEEEE
T ss_pred CCCccCceeccceecC----------CCC----CCchhHHHHHHHHHhcCCceEEec
Confidence 998877 666611110 122 245678999999999999887664
No 102
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.85 E-value=1.6e-09 Score=115.53 Aligned_cols=140 Identities=19% Similarity=0.140 Sum_probs=100.8
Q ss_pred EcceEEEeeCceecC-CCCC---Ccee---chhhHHhc--------------cCCCCcEEEECCChHHHHHHHHHHhCCC
Q psy14461 207 TGFNFLLAVERRCLP-EPRN---SALI---SADDLFRL--------------GAWPGKTLVLGGSLMAVEIAATLNFLGV 265 (535)
Q Consensus 207 ~~d~lViATGs~p~~-~i~G---~~v~---~~~~~~~~--------------~~~~k~vvViGgG~~g~e~A~~l~~~g~ 265 (535)
.||+++++||++|.. ++++ +.++ ...+...+ .....+|+|||||++|+.+|..|++.|.
T Consensus 37 ~~~~l~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG~aGl~aA~~La~~G~ 116 (497)
T 2bry_A 37 SFQGLCRALGVESGGGLSQYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAGPCGLRAAVELALLGA 116 (497)
T ss_dssp HHHHHHHHHTCCTTCHHHHHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCCCCcEeehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCCCEEEECccHHHHHHHHHHHHCCC
Confidence 478899999999876 6655 2222 23333332 1235789999999999999999999999
Q ss_pred cEEEEEc-CcCCcc-----Cc----------------------------HHHHHHHHHhhhcCCeEE-cceEEEEEEEeC
Q psy14461 266 PVTLVYS-RRLLKH-----FD----------------------------QEMVRILLSSLTKAGVSI-QCCVIEKVISSF 310 (535)
Q Consensus 266 ~Vtlv~~-~~~l~~-----~~----------------------------~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~ 310 (535)
+|+|+++ +.+... .+ .++.+.+.+.+++.||++ .++++++++.++
T Consensus 117 ~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~ 196 (497)
T 2bry_A 117 RVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPP 196 (497)
T ss_dssp EEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCC
T ss_pred eEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEec
Confidence 9999998 654210 01 456667778888889999 999999998631
Q ss_pred --CCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 311 --DGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 311 --~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
++.+.|++....+|+..++.+|.||+|+|..+....
T Consensus 197 ~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r~ 234 (497)
T 2bry_A 197 RKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPEG 234 (497)
T ss_dssp STTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCTT
T ss_pred CCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCccccc
Confidence 234567664211453236899999999999987653
No 103
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.79 E-value=4.1e-10 Score=117.63 Aligned_cols=95 Identities=12% Similarity=-0.038 Sum_probs=70.1
Q ss_pred cHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccC--------CCCCCCCCCcc
Q psy14461 280 DQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAME--------KKFDFAALNLH 350 (535)
Q Consensus 280 ~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G--------~~p~~~~l~l~ 350 (535)
+..+...+...+++.| ++ +++.|++|+.+ ++.+.|++ .+|+ ++.+|.||+|+| +.|+.+....+
T Consensus 203 ~~g~~~l~~~~~~~~g-~i~~~~~V~~i~~~-~~~v~v~~---~~g~--~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~ 275 (431)
T 3k7m_X 203 SNGSADLVDAMSQEIP-EIRLQTVVTGIDQS-GDVVNVTV---KDGH--AFQAHSVIVATPMNTWRRIVFTPALPERRRS 275 (431)
T ss_dssp TTCTHHHHHHHHTTCS-CEESSCCEEEEECS-SSSEEEEE---TTSC--CEEEEEEEECSCGGGGGGSEEESCCCHHHHH
T ss_pred CCcHHHHHHHHHhhCC-ceEeCCEEEEEEEc-CCeEEEEE---CCCC--EEEeCEEEEecCcchHhheeeCCCCCHHHHH
Confidence 3444556666666778 99 99999999876 45677776 3676 699999999999 88988764323
Q ss_pred ccCeeecCCCceEcCCCCCcCCCCEEEeCCcC
Q psy14461 351 HIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIV 382 (535)
Q Consensus 351 ~~gl~~~~~G~i~vd~~~~T~~~~IyA~GD~~ 382 (535)
..+.... ...++|+..++|+.++||+.||..
T Consensus 276 ~~~~~~~-~~~~kv~~~~~~~~~~i~~~~d~~ 306 (431)
T 3k7m_X 276 VIEEGHG-GQGLKILIHVRGAEAGIECVGDGI 306 (431)
T ss_dssp HHHHCCC-CCEEEEEEEEESCCTTEEEEBSSS
T ss_pred HHHhCCC-cceEEEEEEECCCCcCceEcCCCC
Confidence 2222222 234899999999999999999986
No 104
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.75 E-value=3.3e-08 Score=107.00 Aligned_cols=159 Identities=11% Similarity=-0.038 Sum_probs=92.2
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCC-cccccccccccc---cccccchhhcccc------------ccccc-
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGS-HLSFRKKRRLYY---PVAMSDLELEQDS------------TSALN- 151 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~-~~~~~~~~l~~~---~~~i~~~~~~~~~------------~~~~~- 151 (535)
++|+|||+|++|+.+|+.+...+.+|+|+|+.. .++...|..... ...+-......++ +..+.
T Consensus 22 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l~~ 101 (641)
T 3cp8_A 22 YDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRMLNR 101 (641)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEECS
T ss_pred CCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhccc
Confidence 789999999999999999988899999999985 233222210000 0000000000000 00000
Q ss_pred ---------ccccCHHHHHHHHHHHHHHHHHHHHHHHHh-cCcEEEEeEEEEe--cCCEE---EEc-eeEEEcceEEEee
Q psy14461 152 ---------VTIRNWNAATKLIKRFCIRAKNDSMRELKA-LGIDIVRTAAAFT--NPHTI---KLS-NRSVTGFNFLLAV 215 (535)
Q Consensus 152 ---------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~gV~~~~g~~~~~--~~~~v---~~~-~~~~~~d~lViAT 215 (535)
....|...+ ...+.+.+++ .||+++.+.+..+ ++..+ .+. +.++.+|.||+||
T Consensus 102 ~kgpav~~~r~~~Dr~~l-----------~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLAT 170 (641)
T 3cp8_A 102 SKGPAMHSPRAQADKTQY-----------SLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVTVRSGRAIQAKAAILAC 170 (641)
T ss_dssp SSCTTTCEEEEEECHHHH-----------HHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCEEEEEEEEECC
T ss_pred ccCccccchhhhcCHHHH-----------HHHHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEEECCCcEEEeCEEEECc
Confidence 001222222 2223355666 4999988777653 34443 333 3689999999999
Q ss_pred CceecC-CCCCCceechhhHHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEE
Q psy14461 216 ERRCLP-EPRNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVY 271 (535)
Q Consensus 216 Gs~p~~-~i~G~~v~~~~~~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~ 271 (535)
|+.+.. .++|..-+ . ..+++ |+.+++++|..|.+.|.+|+.+.
T Consensus 171 G~~s~~~i~~G~~~~--------~--~g~~v---G~~~a~~la~~L~~~G~kv~~l~ 214 (641)
T 3cp8_A 171 GTFLNGLIHIGMDHF--------P--GGRST---AEPPVEGLTESLASLGFSFGRLK 214 (641)
T ss_dssp TTCBTCEEEETTEEE--------E--CSSST---TSCCBCSHHHHHHHTTCCEEEEE
T ss_pred CCCCCccceeeeeee--------c--ccccc---CCchhhhhHHHHHhCCceEEeec
Confidence 998866 44441111 0 11221 46788999999999999987664
No 105
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.49 E-value=4.4e-07 Score=90.55 Aligned_cols=99 Identities=19% Similarity=0.115 Sum_probs=79.9
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCC---------------cc----CcHHHHHHHHHhhhcCCeEE-cc
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLL---------------KH----FDQEMVRILLSSLTKAGVSI-QC 300 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l---------------~~----~~~~~~~~~~~~l~~~gV~i-~~ 300 (535)
.+|+|||||+.|+.+|..|++.|.+|+++++ +.+. +. ...++...+.+.+++.|+++ .+
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICLE 87 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEcc
Confidence 5799999999999999999999999999998 6432 11 13677788888888889999 99
Q ss_pred eEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCC---CCCCCC
Q psy14461 301 CVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEK---KFDFAA 346 (535)
Q Consensus 301 ~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~---~p~~~~ 346 (535)
++|++++...++.+.|.+. +| ++.+|.+++|+|. .|....
T Consensus 88 ~~v~~i~~~~~~~~~v~~~---~g---~~~~d~vVlAtG~~~~~p~~~~ 130 (332)
T 3lzw_A 88 QAVESVEKQADGVFKLVTN---EE---THYSKTVIITAGNGAFKPRKLE 130 (332)
T ss_dssp CCEEEEEECTTSCEEEEES---SE---EEEEEEEEECCTTSCCEECCCC
T ss_pred CEEEEEEECCCCcEEEEEC---CC---EEEeCEEEECCCCCcCCCCCCC
Confidence 9999998863335677763 45 4899999999999 776543
No 106
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.48 E-value=8.6e-07 Score=86.93 Aligned_cols=99 Identities=14% Similarity=0.057 Sum_probs=76.8
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcC---------Ccc----CcHHHHHHHHHhhhcC-CeEEcceEEEEE
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRL---------LKH----FDQEMVRILLSSLTKA-GVSIQCCVIEKV 306 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~---------l~~----~~~~~~~~~~~~l~~~-gV~i~~~~v~~i 306 (535)
.+|+|||||+.|+.+|..|++.|.+|+++++ +.. ++. ...++...+.+.+++. ++++.+.+++++
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i 82 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEGRVTDA 82 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEESCEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEeEEEEE
Confidence 4799999999999999999999999999996 321 111 1246777778878776 788833489999
Q ss_pred EEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 307 ISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 307 ~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
+.+ ++...|++. +|+ ++.+|.+++|+|..|....
T Consensus 83 ~~~-~~~~~v~~~---~g~--~~~~d~vviAtG~~~~~~~ 116 (297)
T 3fbs_A 83 KGS-FGEFIVEID---GGR--RETAGRLILAMGVTDELPE 116 (297)
T ss_dssp EEE-TTEEEEEET---TSC--EEEEEEEEECCCCEEECCC
T ss_pred EEc-CCeEEEEEC---CCC--EEEcCEEEECCCCCCCCCC
Confidence 876 455677763 676 7999999999999887543
No 107
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.48 E-value=3.4e-07 Score=91.65 Aligned_cols=103 Identities=17% Similarity=0.059 Sum_probs=80.6
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-C----cC------------Ccc-----CcHHHHHHHHHhhhcCCeEE
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-R----RL------------LKH-----FDQEMVRILLSSLTKAGVSI 298 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~----~~------------l~~-----~~~~~~~~~~~~l~~~gV~i 298 (535)
.++|+|||||+.|+.+|..|++.|.+|+++++ + .+ .+. ...++...+.+.+++.|+++
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i 101 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTEI 101 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcCCEE
Confidence 46899999999999999999999999999998 4 01 111 13578888888899999999
Q ss_pred -cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCC
Q psy14461 299 -QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAAL 347 (535)
Q Consensus 299 -~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l 347 (535)
.++ +.+++.. ++.+.+.+....++. ++.+|.+++|+|.+|....+
T Consensus 102 ~~~~-v~~i~~~-~~~~~v~~~~~~~~~--~~~~d~vvlAtG~~~~~~~~ 147 (338)
T 3itj_A 102 ITET-VSKVDLS-SKPFKLWTEFNEDAE--PVTTDAIILATGASAKRMHL 147 (338)
T ss_dssp ECSC-EEEEECS-SSSEEEEETTCSSSC--CEEEEEEEECCCEEECCCCC
T ss_pred EEeE-EEEEEEc-CCEEEEEEEecCCCc--EEEeCEEEECcCCCcCCCCC
Confidence 888 9999876 456666663222444 78999999999998876543
No 108
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.45 E-value=8.3e-07 Score=88.10 Aligned_cols=98 Identities=13% Similarity=0.046 Sum_probs=77.8
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEcC--c-C--------Ccc----CcHHHHHHHHHhhhcCCeEE-cceEEEE
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYSR--R-L--------LKH----FDQEMVRILLSSLTKAGVSI-QCCVIEK 305 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~--~-~--------l~~----~~~~~~~~~~~~l~~~gV~i-~~~~v~~ 305 (535)
.+|+|||||+.|+.+|..|++.|.+|+++++. . . .+. ...++.+.+.+.+++.|+++ . .++.+
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~ 94 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL-DIVEK 94 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE-SCEEE
T ss_pred cCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE-EEEEE
Confidence 58999999999999999999999999999973 1 1 121 13577788888888899999 8 89999
Q ss_pred EEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 306 VISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 306 i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
++.+ ++.+.+.+. +|+ ++.+|.+++|+|..|....
T Consensus 95 i~~~-~~~~~v~~~---~g~--~~~~d~lvlAtG~~~~~~~ 129 (323)
T 3f8d_A 95 IENR-GDEFVVKTK---RKG--EFKADSVILGIGVKRRKLG 129 (323)
T ss_dssp EEEC---CEEEEES---SSC--EEEEEEEEECCCCEECCCC
T ss_pred EEec-CCEEEEEEC---CCC--EEEcCEEEECcCCCCccCC
Confidence 9876 455667763 566 7999999999999887653
No 109
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.45 E-value=7e-07 Score=89.87 Aligned_cols=92 Identities=13% Similarity=0.136 Sum_probs=75.0
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCC---------------------ccC-----------cHHHHHHHH
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLL---------------------KHF-----------DQEMVRILL 288 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l---------------------~~~-----------~~~~~~~~~ 288 (535)
.+|+|||||+.|+.+|..|++.|.+|+++++ +.+. +.+ ..++.+.+.
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYLA 83 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHHH
Confidence 3699999999999999999999999999998 5431 110 167888888
Q ss_pred HhhhcCCeEE-cceEEEEEEEeCCCcEE-EEEecCCCCCceEEEcCEEEEccCC
Q psy14461 289 SSLTKAGVSI-QCCVIEKVISSFDGMKG-VRGFHPESKEPFADVFKTVVNAMEK 340 (535)
Q Consensus 289 ~~l~~~gV~i-~~~~v~~i~~~~~~~~~-v~~~~~~~G~~~~~~~D~vi~a~G~ 340 (535)
+.+++.|+++ .+++|++++.. ++.+. |++ .+| ++.+|.||+|+|.
T Consensus 84 ~~~~~~~~~~~~~~~v~~i~~~-~~~~~~v~~---~~g---~~~~d~vV~AtG~ 130 (357)
T 4a9w_A 84 QYEQKYALPVLRPIRVQRVSHF-GERLRVVAR---DGR---QWLARAVISATGT 130 (357)
T ss_dssp HHHHHTTCCEECSCCEEEEEEE-TTEEEEEET---TSC---EEEEEEEEECCCS
T ss_pred HHHHHcCCEEEcCCEEEEEEEC-CCcEEEEEe---CCC---EEEeCEEEECCCC
Confidence 8888999999 99999999886 45555 554 244 6999999999995
No 110
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.43 E-value=1.2e-06 Score=79.60 Aligned_cols=106 Identities=8% Similarity=-0.023 Sum_probs=67.8
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRFC 168 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 168 (535)
++++|||+|++|+.+|......+.+|+|+|+.+........+..+ +++ +......++.+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~-----------~~~----~~~~~~~~~~~------ 60 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNY-----------PGL----LDEPSGEELLR------ 60 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCS-----------TTC----TTCCCHHHHHH------
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhcc-----------CCC----cCCCCHHHHHH------
Confidence 578999999999999998888899999999987432111111111 110 00112223322
Q ss_pred HHHHHHHHHHHHhcCcEEEEeEEEEec--CC--EEEEceeEEEcceEEEeeCceec
Q psy14461 169 IRAKNDSMRELKALGIDIVRTAAAFTN--PH--TIKLSNRSVTGFNFLLAVERRCL 220 (535)
Q Consensus 169 ~~~~~~~~~~~~~~gV~~~~g~~~~~~--~~--~v~~~~~~~~~d~lViATGs~p~ 220 (535)
.+.+.+++.||+++.+++..++ +. .+++++.++.+|.||+|||.+|.
T Consensus 61 -----~l~~~~~~~gv~v~~~~v~~i~~~~~~~~v~~~~g~i~ad~vI~A~G~~~~ 111 (180)
T 2ywl_A 61 -----RLEAHARRYGAEVRPGVVKGVRDMGGVFEVETEEGVEKAERLLLCTHKDPT 111 (180)
T ss_dssp -----HHHHHHHHTTCEEEECCCCEEEECSSSEEEECSSCEEEEEEEEECCTTCCH
T ss_pred -----HHHHHHHHcCCEEEeCEEEEEEEcCCEEEEEECCCEEEECEEEECCCCCCC
Confidence 2335677789999887543332 22 34444458999999999999884
No 111
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.43 E-value=1.5e-06 Score=91.67 Aligned_cols=106 Identities=13% Similarity=0.103 Sum_probs=79.7
Q ss_pred CcEEEECCChHHHHHHHHHHh---CCCc---EEEEEc-CcCCc-------------------------------------
Q psy14461 242 GKTLVLGGSLMAVEIAATLNF---LGVP---VTLVYS-RRLLK------------------------------------- 277 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~---~g~~---Vtlv~~-~~~l~------------------------------------- 277 (535)
++|+|||||+.|+.+|..|++ .|.+ |+++++ +.+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 689999999999999999999 9999 999998 54310
Q ss_pred cC---------------cHHHHHHHHHhhhcCCeE--E-cceEEEEEEEeCC-CcEEEEEecCCCCCceEEEcCEEEEcc
Q psy14461 278 HF---------------DQEMVRILLSSLTKAGVS--I-QCCVIEKVISSFD-GMKGVRGFHPESKEPFADVFKTVVNAM 338 (535)
Q Consensus 278 ~~---------------~~~~~~~~~~~l~~~gV~--i-~~~~v~~i~~~~~-~~~~v~~~~~~~G~~~~~~~D~vi~a~ 338 (535)
.+ ..++.+.+.+.+++.|++ + .+++|+.++..++ +...|++.+..+|+..++.+|.||+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 00 145566777777777888 8 9999999987632 256777753224544578999999999
Q ss_pred C--CCCCCCCC
Q psy14461 339 E--KKFDFAAL 347 (535)
Q Consensus 339 G--~~p~~~~l 347 (535)
| ..|+...+
T Consensus 163 G~~s~p~~p~i 173 (464)
T 2xve_A 163 GHFSTPYVPEF 173 (464)
T ss_dssp CSSSSBCCCCC
T ss_pred CCCCCCccCCC
Confidence 9 77776543
No 112
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.41 E-value=1.5e-06 Score=86.98 Aligned_cols=94 Identities=13% Similarity=0.088 Sum_probs=75.8
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCC---------------cc----CcHHHHHHHHHhhhcCCeEE-cc
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLL---------------KH----FDQEMVRILLSSLTKAGVSI-QC 300 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l---------------~~----~~~~~~~~~~~~l~~~gV~i-~~ 300 (535)
.+|+|||||+.|+.+|..|++.|.+|+++++ +.+. +. ...++...+.+.+++.++++ .+
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 85 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYSLG 85 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEEeC
Confidence 5799999999999999999999999999998 5431 11 12567777778888889999 99
Q ss_pred eEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCC
Q psy14461 301 CVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKK 341 (535)
Q Consensus 301 ~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~ 341 (535)
++|++++.. ++.+.|.+ .+|+ ++.+|.+++|+|..
T Consensus 86 ~~v~~i~~~-~~~~~v~~---~~g~--~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 86 ERAETLERE-GDLFKVTT---SQGN--AYTAKAVIIAAGVG 120 (335)
T ss_dssp CCEEEEEEE-TTEEEEEE---TTSC--EEEEEEEEECCTTS
T ss_pred CEEEEEEEC-CCEEEEEE---CCCC--EEEeCEEEECCCCC
Confidence 999999876 34566665 3565 79999999999983
No 113
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.40 E-value=1.3e-06 Score=88.67 Aligned_cols=96 Identities=14% Similarity=0.080 Sum_probs=77.5
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCC-------c--------c----CcHHHHHHHHHhhhcCCeEE-cc
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLL-------K--------H----FDQEMVRILLSSLTKAGVSI-QC 300 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l-------~--------~----~~~~~~~~~~~~l~~~gV~i-~~ 300 (535)
.+|+|||||+.|+.+|..|++.|.+|+++++ +.+. | . ...++.+.+.+.+++.++++ .+
T Consensus 15 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 94 (360)
T 3ab1_A 15 RDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVVLN 94 (360)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEEcC
Confidence 5799999999999999999999999999998 5431 1 1 12667777888888889999 99
Q ss_pred eEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCC
Q psy14461 301 CVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKF 342 (535)
Q Consensus 301 ~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p 342 (535)
++|+.++..+++.+.|++ .+|+ ++.+|.+++|+|..+
T Consensus 95 ~~v~~i~~~~~~~~~v~~---~~g~--~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 95 ETVTKYTKLDDGTFETRT---NTGN--VYRSRAVLIAAGLGA 131 (360)
T ss_dssp CCEEEEEECTTSCEEEEE---TTSC--EEEEEEEEECCTTCS
T ss_pred CEEEEEEECCCceEEEEE---CCCc--EEEeeEEEEccCCCc
Confidence 999999876333567776 3676 799999999999843
No 114
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.38 E-value=2e-06 Score=90.17 Aligned_cols=105 Identities=13% Similarity=-0.052 Sum_probs=78.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCC--cEEEEEc-CcCCc---c------------------------------------
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGV--PVTLVYS-RRLLK---H------------------------------------ 278 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~--~Vtlv~~-~~~l~---~------------------------------------ 278 (535)
..+|+|||||+.|+.+|..|++.|. +|+++++ +.+.. .
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~~ 85 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPLY 85 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCCC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCchh
Confidence 4689999999999999999999999 9999998 53310 0
Q ss_pred ---------------------------CcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCC-ceEE
Q psy14461 279 ---------------------------FDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKE-PFAD 329 (535)
Q Consensus 279 ---------------------------~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~-~~~~ 329 (535)
...++.+++.+..++.++.+ .+++|++++.. ++.+.|++.+..+|+ ..++
T Consensus 86 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~-~~~~~V~~~~~~~G~~~~~~ 164 (447)
T 2gv8_A 86 RDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKK-DGSWVVTYKGTKAGSPISKD 164 (447)
T ss_dssp TTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEE-TTEEEEEEEESSTTCCEEEE
T ss_pred hhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeC-CCeEEEEEeecCCCCeeEEE
Confidence 01245566666666667788 99999999876 566777775322354 4478
Q ss_pred EcCEEEEccCC--CCCCCC
Q psy14461 330 VFKTVVNAMEK--KFDFAA 346 (535)
Q Consensus 330 ~~D~vi~a~G~--~p~~~~ 346 (535)
.+|.||+|+|. .|+...
T Consensus 165 ~~d~VVvAtG~~s~p~~p~ 183 (447)
T 2gv8_A 165 IFDAVSICNGHYEVPYIPN 183 (447)
T ss_dssp EESEEEECCCSSSSBCBCC
T ss_pred EeCEEEECCCCCCCCCCCC
Confidence 99999999998 676543
No 115
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.36 E-value=2e-06 Score=85.13 Aligned_cols=100 Identities=13% Similarity=0.121 Sum_probs=70.1
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEEc-Cc---CC---c-------cCcHHHHHHHHHhhhcC-CeEEcceEEEEEE
Q psy14461 243 KTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RR---LL---K-------HFDQEMVRILLSSLTKA-GVSIQCCVIEKVI 307 (535)
Q Consensus 243 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~---~l---~-------~~~~~~~~~~~~~l~~~-gV~i~~~~v~~i~ 307 (535)
.|+|||+|+.|+.+|..++++|.+|+++++ .. +. + ...+++.+...+.+.+. ++.+....+..+.
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMIT 87 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEee
Confidence 599999999999999999999999999997 31 00 1 12345555555555444 4566444555555
Q ss_pred EeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCC
Q psy14461 308 SSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAAL 347 (535)
Q Consensus 308 ~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l 347 (535)
...++..++.+ .+|+ ++.+|.+|+|||.+|....+
T Consensus 88 ~~~~~~~~v~~---~~g~--~~~a~~liiATGs~p~~p~i 122 (304)
T 4fk1_A 88 KQSTGLFEIVT---KDHT--KYLAERVLLATGMQEEFPSI 122 (304)
T ss_dssp ECTTSCEEEEE---TTCC--EEEEEEEEECCCCEEECCSC
T ss_pred ecCCCcEEEEE---CCCC--EEEeCEEEEccCCccccccc
Confidence 54345566766 3677 89999999999998875443
No 116
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.35 E-value=1.3e-06 Score=89.86 Aligned_cols=98 Identities=14% Similarity=0.074 Sum_probs=72.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCC---ccCcHHH---------HHHHHHhhhcCCeEE-cceEEEEEE
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLL---KHFDQEM---------VRILLSSLTKAGVSI-QCCVIEKVI 307 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l---~~~~~~~---------~~~~~~~l~~~gV~i-~~~~v~~i~ 307 (535)
-+|+|||||+.|+.+|..|.+.+.+|+++++ +.+. +.+...+ .....+.+++.||++ .+++|++|+
T Consensus 10 ~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~id 89 (385)
T 3klj_A 10 TKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATSID 89 (385)
T ss_dssp CSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEEEEE
T ss_pred CCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEEEEE
Confidence 4799999999999999999777899999998 4421 1111111 111234456789999 999999998
Q ss_pred EeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCC
Q psy14461 308 SSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAAL 347 (535)
Q Consensus 308 ~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l 347 (535)
.+ + ..|++ .+|+ ++.+|.+++|||.+|....+
T Consensus 90 ~~--~-~~v~~---~~g~--~~~yd~lvlAtG~~p~~p~i 121 (385)
T 3klj_A 90 PN--N-KLVTL---KSGE--KIKYEKLIIASGSIANKIKV 121 (385)
T ss_dssp TT--T-TEEEE---TTSC--EEECSEEEECCCEEECCCCC
T ss_pred CC--C-CEEEE---CCCC--EEECCEEEEecCCCcCCCCC
Confidence 64 2 25666 3777 89999999999998876543
No 117
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.35 E-value=2.5e-06 Score=84.41 Aligned_cols=97 Identities=12% Similarity=0.059 Sum_probs=76.5
Q ss_pred cEEEECCChHHHHHHHHHHhCCC-cEEEEEc-Cc-----------CCcc-----CcHHHHHHHHHhhhcCCeEE-cceEE
Q psy14461 243 KTLVLGGSLMAVEIAATLNFLGV-PVTLVYS-RR-----------LLKH-----FDQEMVRILLSSLTKAGVSI-QCCVI 303 (535)
Q Consensus 243 ~vvViGgG~~g~e~A~~l~~~g~-~Vtlv~~-~~-----------~l~~-----~~~~~~~~~~~~l~~~gV~i-~~~~v 303 (535)
+|+|||+|+.|+.+|..|++.|. +|+++++ .. ..+. ..+++.+.+.+.+++.|+++ . .++
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v 81 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEM-TAV 81 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEEC-SCE
T ss_pred eEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEE-EEE
Confidence 69999999999999999999999 9999987 31 0121 12567777888888889999 7 788
Q ss_pred EEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 304 EKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 304 ~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
.+++.. ++.+.|.+ .+|+ ++.+|.+++|+|..|....
T Consensus 82 ~~i~~~-~~~~~v~~---~~g~--~~~~~~vv~AtG~~~~~~~ 118 (311)
T 2q0l_A 82 QRVSKK-DSHFVILA---EDGK--TFEAKSVIIATGGSPKRTG 118 (311)
T ss_dssp EEEEEE-TTEEEEEE---TTSC--EEEEEEEEECCCEEECCCC
T ss_pred EEEEEc-CCEEEEEE---cCCC--EEECCEEEECCCCCCCCCC
Confidence 888876 45556665 3666 7999999999998887543
No 118
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.30 E-value=2.1e-06 Score=89.19 Aligned_cols=95 Identities=17% Similarity=0.152 Sum_probs=75.4
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCcc-----------------------------------------
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKH----------------------------------------- 278 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~----------------------------------------- 278 (535)
..+|+|||||..|+.+|..|++.|.+|+|+++ +.+...
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 106 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQDF 106 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHHH
Confidence 35799999999999999999999999999998 543100
Q ss_pred -----------------------CcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEE
Q psy14461 279 -----------------------FDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTV 334 (535)
Q Consensus 279 -----------------------~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~v 334 (535)
...++.+.+.+.+++.|+++ .+++|+++..+ ++.+.|++. +| ++.+|.|
T Consensus 107 ~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~-~~~~~V~~~---~g---~i~ad~V 179 (417)
T 3v76_A 107 VALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERT-ASGFRVTTS---AG---TVDAASL 179 (417)
T ss_dssp HHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEE-TTEEEEEET---TE---EEEESEE
T ss_pred HHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEe-CCEEEEEEC---Cc---EEEeeEE
Confidence 01255666777788889999 99999999876 455667662 44 6999999
Q ss_pred EEccCCCC
Q psy14461 335 VNAMEKKF 342 (535)
Q Consensus 335 i~a~G~~p 342 (535)
|+|+|..+
T Consensus 180 IlAtG~~S 187 (417)
T 3v76_A 180 VVASGGKS 187 (417)
T ss_dssp EECCCCSS
T ss_pred EECCCCcc
Confidence 99999876
No 119
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.29 E-value=5e-07 Score=93.59 Aligned_cols=100 Identities=20% Similarity=0.178 Sum_probs=73.4
Q ss_pred CcEEEECCChHHHHHHHHHHh---CCCcEEEEEc-CcCC--cc---------CcHHHHHHHHHhhhcCCeEE-cceEEEE
Q psy14461 242 GKTLVLGGSLMAVEIAATLNF---LGVPVTLVYS-RRLL--KH---------FDQEMVRILLSSLTKAGVSI-QCCVIEK 305 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~---~g~~Vtlv~~-~~~l--~~---------~~~~~~~~~~~~l~~~gV~i-~~~~v~~ 305 (535)
++|+|||||+.|+.+|..|++ .|.+|+|+++ +.+. +. ..+++...+.+.+++.|+++ .+ ++++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~ 80 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEG-TVEK 80 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEEC-EEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEe-eEEE
Confidence 579999999999999999999 8999999998 5431 11 12233344566777789999 77 8988
Q ss_pred EEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 306 VISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 306 i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
++.+ +. .|++.+ .+++..++++|.+++|+|.+|+...
T Consensus 81 i~~~-~~--~V~~~~-g~~~~~~~~~d~lViAtG~~~~~~~ 117 (409)
T 3h8l_A 81 IDAK-SS--MVYYTK-PDGSMAEEEYDYVIVGIGAHLATEL 117 (409)
T ss_dssp EETT-TT--EEEEEC-TTSCEEEEECSEEEECCCCEECGGG
T ss_pred EeCC-CC--EEEEcc-CCcccceeeCCEEEECCCCCcCccC
Confidence 8764 22 455542 2233356999999999999988654
No 120
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.28 E-value=2.8e-06 Score=91.06 Aligned_cols=97 Identities=19% Similarity=0.218 Sum_probs=77.1
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcC------------------------------------C------c
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRL------------------------------------L------K 277 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~------------------------------------l------~ 277 (535)
..+|+|||||+.|+.+|..|++.|.+|+|+++ +.+ + +
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 46899999999999999999999999999998 532 0 0
Q ss_pred cC------------------------------cHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcE-EEEEecCCCCC
Q psy14461 278 HF------------------------------DQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMK-GVRGFHPESKE 325 (535)
Q Consensus 278 ~~------------------------------~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~-~v~~~~~~~G~ 325 (535)
.. ...+.+.+.+.+++.|+++ ++++|+++..+ ++.+ .|++ .+|+
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~-~~~v~gV~l---~~G~ 262 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHME-DGQITGVTL---SNGE 262 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEES-SSBEEEEEE---TTSC
T ss_pred cccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEe-CCEEEEEEE---CCCC
Confidence 00 0445566777788899999 99999999876 4544 4666 3676
Q ss_pred ceEEEcCEEEEccCCCCC
Q psy14461 326 PFADVFKTVVNAMEKKFD 343 (535)
Q Consensus 326 ~~~~~~D~vi~a~G~~p~ 343 (535)
++.+|.||+|+|..+.
T Consensus 263 --~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 263 --EIKSRHVVLAVGHSAR 278 (549)
T ss_dssp --EEECSCEEECCCTTCH
T ss_pred --EEECCEEEECCCCChh
Confidence 7999999999999884
No 121
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.27 E-value=3.6e-06 Score=83.28 Aligned_cols=98 Identities=15% Similarity=0.164 Sum_probs=76.2
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEEc-C--cCC-----------c-cCcHHHHHHHHHhhhcCCeEE-cceEEEEE
Q psy14461 243 KTLVLGGSLMAVEIAATLNFLGVPVTLVYS-R--RLL-----------K-HFDQEMVRILLSSLTKAGVSI-QCCVIEKV 306 (535)
Q Consensus 243 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~--~~l-----------~-~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i 306 (535)
+|+|||+|+.|+.+|..|++.|.+|+++++ . ... + ...+++.+.+.+.+++.|+++ .+++++.+
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i 82 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKL 82 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEE
Confidence 699999999999999999999999999975 1 110 0 112567778888888899999 99899999
Q ss_pred EEeCC--CcEEEEEecCCCCCceEEEcCEEEEccCCCCCCC
Q psy14461 307 ISSFD--GMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFA 345 (535)
Q Consensus 307 ~~~~~--~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~ 345 (535)
+.+.+ +...|.+ .+|+ ++.+|.+++|+|..|...
T Consensus 83 ~~~~~~~~~~~v~~---~~g~--~~~~~~lv~AtG~~~~~~ 118 (310)
T 1fl2_A 83 IPAAVEGGLHQIET---ASGA--VLKARSIIVATGAKWRNM 118 (310)
T ss_dssp ECCSSTTCCEEEEE---TTSC--EEEEEEEEECCCEEECCC
T ss_pred EecccCCceEEEEE---CCCC--EEEeCEEEECcCCCcCCC
Confidence 75421 2456766 3676 799999999999987654
No 122
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.27 E-value=7.4e-07 Score=93.19 Aligned_cols=98 Identities=12% Similarity=0.158 Sum_probs=73.4
Q ss_pred CcEEEECCChHHHHHHHHHHh---CCCcEEEEEc-CcCC--cc---------CcHHHHHHHHHhhhcCCeEEcceEEEEE
Q psy14461 242 GKTLVLGGSLMAVEIAATLNF---LGVPVTLVYS-RRLL--KH---------FDQEMVRILLSSLTKAGVSIQCCVIEKV 306 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~---~g~~Vtlv~~-~~~l--~~---------~~~~~~~~~~~~l~~~gV~i~~~~v~~i 306 (535)
++|+|||||+.|+.+|..|++ .|.+|+++++ +.+. +. ...++...+.+.+++.||++...+++.+
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~~~v~~i 84 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIAQSAEQI 84 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEECSCEEEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEEeEEEEE
Confidence 689999999999999999999 7999999998 5431 21 1123333445667788999933588888
Q ss_pred EEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCC
Q psy14461 307 ISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAAL 347 (535)
Q Consensus 307 ~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l 347 (535)
+.+ +. .|++ .+|+ ++.+|.+++|+|.+|+...+
T Consensus 85 d~~-~~--~V~~---~~g~--~i~~d~lviAtG~~~~~~~i 117 (437)
T 3sx6_A 85 DAE-AQ--NITL---ADGN--TVHYDYLMIATGPKLAFENV 117 (437)
T ss_dssp ETT-TT--EEEE---TTSC--EEECSEEEECCCCEECGGGS
T ss_pred EcC-CC--EEEE---CCCC--EEECCEEEECCCCCcCcccC
Confidence 754 22 5666 3676 79999999999999886543
No 123
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.26 E-value=5.9e-06 Score=82.17 Aligned_cols=97 Identities=8% Similarity=0.075 Sum_probs=75.5
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEcCcC------------Ccc----CcHHHHHHHHHhhhcCCeEE-cceEEE
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYSRRL------------LKH----FDQEMVRILLSSLTKAGVSI-QCCVIE 304 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~------------l~~----~~~~~~~~~~~~l~~~gV~i-~~~~v~ 304 (535)
.+|+|||||+.|+.+|..|++.|.+|+++++..+ .+. ...++.+.+.+.+++.|+++ . .++.
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~ 95 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREG-VEVR 95 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEET-CCEE
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEE-eeEE
Confidence 5799999999999999999999999999997211 121 12566777778888889999 7 6888
Q ss_pred EEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 305 KVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 305 ~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
.++.. ++.+.|.. +++ ++.+|.+++|+|..|....
T Consensus 96 ~i~~~-~~~~~v~~----~~~--~~~~~~li~AtG~~~~~~~ 130 (319)
T 3cty_A 96 SIKKT-QGGFDIET----NDD--TYHAKYVIITTGTTHKHLG 130 (319)
T ss_dssp EEEEE-TTEEEEEE----SSS--EEEEEEEEECCCEEECCCC
T ss_pred EEEEe-CCEEEEEE----CCC--EEEeCEEEECCCCCcccCC
Confidence 88875 34455654 455 7999999999998876543
No 124
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.25 E-value=5.5e-06 Score=82.58 Aligned_cols=98 Identities=11% Similarity=0.009 Sum_probs=75.4
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEcCcC------------CccC-----cHHHHHHHHHhhhcCCeEE-cceEE
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYSRRL------------LKHF-----DQEMVRILLSSLTKAGVSI-QCCVI 303 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~------------l~~~-----~~~~~~~~~~~l~~~gV~i-~~~~v 303 (535)
.+|+|||||+.|+.+|..|++.|.+|+++++..+ .+.+ ..++.+.+.+.+++.|+++ . .++
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v 87 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEM-DEV 87 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEE-CCE
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEe-eeE
Confidence 4799999999999999999999999999998311 1111 3467777788888899999 7 578
Q ss_pred EEEEEe--CCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCC
Q psy14461 304 EKVISS--FDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFA 345 (535)
Q Consensus 304 ~~i~~~--~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~ 345 (535)
.+++.. ++..+.|.+. +|+ ++.+|.+++|+|..|...
T Consensus 88 ~~i~~~~~~~~~~~v~~~---~g~--~~~~~~vv~AtG~~~~~~ 126 (325)
T 2q7v_A 88 QGVQHDATSHPYPFTVRG---YNG--EYRAKAVILATGADPRKL 126 (325)
T ss_dssp EEEEECTTSSSCCEEEEE---SSC--EEEEEEEEECCCEEECCC
T ss_pred EEEEeccCCCceEEEEEC---CCC--EEEeCEEEECcCCCcCCC
Confidence 888764 2221556554 666 799999999999987654
No 125
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.24 E-value=4.4e-06 Score=82.51 Aligned_cols=97 Identities=9% Similarity=0.046 Sum_probs=75.2
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEE-EEcCcC------------CccC-----cHHHHHHHHHhhhcCCeEE-cceE
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTL-VYSRRL------------LKHF-----DQEMVRILLSSLTKAGVSI-QCCV 302 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtl-v~~~~~------------l~~~-----~~~~~~~~~~~l~~~gV~i-~~~~ 302 (535)
.+|+|||||+.|+.+|..|++.|.+|++ ++++.+ .|.+ ..++...+.+.+++.|+++ .+ +
T Consensus 5 ~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~ 83 (315)
T 3r9u_A 5 LDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEMV-G 83 (315)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEECC-C
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCCCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEEEE-E
Confidence 5899999999999999999999999999 886211 1222 2678888888899999999 77 8
Q ss_pred EEEEEEeCC--CcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 303 IEKVISSFD--GMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 303 v~~i~~~~~--~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
+.++ .+ + +.+.+.+. ++. ++.+|.+++|+|.+|+...
T Consensus 84 v~~i-~~-~~~~~~~v~~~---~~~--~~~~d~lvlAtG~~~~~~~ 122 (315)
T 3r9u_A 84 VEQI-LK-NSDGSFTIKLE---GGK--TELAKAVIVCTGSAPKKAG 122 (315)
T ss_dssp EEEE-EE-CTTSCEEEEET---TSC--EEEEEEEEECCCEEECCCC
T ss_pred EEEE-ec-CCCCcEEEEEe---cCC--EEEeCEEEEeeCCCCCCCC
Confidence 8888 54 3 45554343 333 7999999999999887653
No 126
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.20 E-value=7.3e-06 Score=83.78 Aligned_cols=95 Identities=18% Similarity=0.081 Sum_probs=76.0
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCcc-----------------------------------------
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKH----------------------------------------- 278 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~----------------------------------------- 278 (535)
..+|+|||||+.|+.+|..|++.|.+|+|+++ +.+...
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 36899999999999999999999999999998 543210
Q ss_pred ---C-----------cHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCC
Q psy14461 279 ---F-----------DQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFD 343 (535)
Q Consensus 279 ---~-----------~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~ 343 (535)
+ ..++.+.+.+.+++.|+++ .++++++++. ++ .|++. +|+ ++.+|.||.|+|..+.
T Consensus 91 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~--~v~~~---~g~--~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 91 VSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG--RLTLQ---TGE--VLEADLIVGADGVGSK 161 (379)
T ss_dssp EEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT--EEEET---TSC--EEECSEEEECCCTTCH
T ss_pred eeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC--EEEEC---CCC--EEEcCEEEECCCccHH
Confidence 0 0345666777778889999 9999999976 33 67663 676 7999999999998875
Q ss_pred C
Q psy14461 344 F 344 (535)
Q Consensus 344 ~ 344 (535)
.
T Consensus 162 v 162 (379)
T 3alj_A 162 V 162 (379)
T ss_dssp H
T ss_pred H
Confidence 4
No 127
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.20 E-value=6.4e-06 Score=83.52 Aligned_cols=94 Identities=13% Similarity=0.125 Sum_probs=73.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCCC-cEEEEEc-CcCC--------------cc---------------------------
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGV-PVTLVYS-RRLL--------------KH--------------------------- 278 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~-~Vtlv~~-~~~l--------------~~--------------------------- 278 (535)
.+|+|||||+.|+.+|..|++.|. +|+++++ + +. +.
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 83 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEE 83 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCCS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhcccccccccccccc
Confidence 469999999999999999999999 9999998 5 10 00
Q ss_pred --CcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCC
Q psy14461 279 --FDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFD 343 (535)
Q Consensus 279 --~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~ 343 (535)
...++...+.+.+++.|+++ .++.|++++.. ++.+.|... +| ++.+|.||+|+|..+.
T Consensus 84 ~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~-~~~~~v~~~---~g---~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 84 HISGETYAEYLQVVANHYELNIFENTVVTNISAD-DAYYTIATT---TE---TYHADYIFVATGDYNF 144 (369)
T ss_dssp SCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEEC-SSSEEEEES---SC---CEEEEEEEECCCSTTS
T ss_pred CCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEC-CCeEEEEeC---CC---EEEeCEEEECCCCCCc
Confidence 01345566677778889999 99999999875 345667652 44 4899999999998764
No 128
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.17 E-value=5.6e-06 Score=89.05 Aligned_cols=100 Identities=12% Similarity=0.061 Sum_probs=78.2
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCc---------------------c----------------CcHHH
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLK---------------------H----------------FDQEM 283 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~---------------------~----------------~~~~~ 283 (535)
.+|+|||||+.|+.+|..|++.|.+|+|+++ +.+.. . ..+++
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~ei 101 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPEI 101 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHHH
T ss_pred CCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHHH
Confidence 4799999999999999999999999999998 53310 0 12467
Q ss_pred HHHHHHhhhcCCe--EE-cceEEEEEEEeCC-CcEEEEEecCCCCCceEEEcCEEEEccC--CCCCCCC
Q psy14461 284 VRILLSSLTKAGV--SI-QCCVIEKVISSFD-GMKGVRGFHPESKEPFADVFKTVVNAME--KKFDFAA 346 (535)
Q Consensus 284 ~~~~~~~l~~~gV--~i-~~~~v~~i~~~~~-~~~~v~~~~~~~G~~~~~~~D~vi~a~G--~~p~~~~ 346 (535)
.+++.+..++.|+ ++ .+++|++++.+++ +.+.|++ .+|+ ++.+|.||+|+| .+|....
T Consensus 102 ~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~---~~G~--~i~ad~lV~AtG~~s~p~~p~ 165 (549)
T 4ap3_A 102 LAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRT---DRGD--EVSARFLVVAAGPLSNANTPA 165 (549)
T ss_dssp HHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEE---TTCC--EEEEEEEEECCCSEEECCCCC
T ss_pred HHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEE---CCCC--EEEeCEEEECcCCCCCCCCCC
Confidence 7778888888888 78 9999999987632 2456776 3777 799999999999 5666543
No 129
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.17 E-value=8.1e-06 Score=83.98 Aligned_cols=97 Identities=21% Similarity=0.081 Sum_probs=76.1
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCc-------------------------------------------
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLK------------------------------------------- 277 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~------------------------------------------- 277 (535)
.+|+|||||..|+.+|..|++.|.+|+|+++ +.+.+
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~~ 86 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGEL 86 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCCE
Confidence 4799999999999999999999999999998 54300
Q ss_pred --c---------------CcHHHHHHHHHhhhcC-CeEE-cceEEEEEEEeCCCcE--EEEEecCCCCCceEEEcCEEEE
Q psy14461 278 --H---------------FDQEMVRILLSSLTKA-GVSI-QCCVIEKVISSFDGMK--GVRGFHPESKEPFADVFKTVVN 336 (535)
Q Consensus 278 --~---------------~~~~~~~~~~~~l~~~-gV~i-~~~~v~~i~~~~~~~~--~v~~~~~~~G~~~~~~~D~vi~ 336 (535)
. ...++.+.+.+.+++. |+++ .++++++++.+ ++.+ .|++. +|+ ++.+|.||.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~-~~~v~g~v~~~---~g~--~~~ad~vV~ 160 (399)
T 2x3n_A 87 LRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRD-ERHAIDQVRLN---DGR--VLRPRVVVG 160 (399)
T ss_dssp EEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEEC-TTSCEEEEEET---TSC--EEEEEEEEE
T ss_pred EEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEc-CCceEEEEEEC---CCC--EEECCEEEE
Confidence 0 0124455666777777 9999 99999999876 4556 77773 676 799999999
Q ss_pred ccCCCCCC
Q psy14461 337 AMEKKFDF 344 (535)
Q Consensus 337 a~G~~p~~ 344 (535)
|.|..+..
T Consensus 161 AdG~~s~v 168 (399)
T 2x3n_A 161 ADGIASYV 168 (399)
T ss_dssp CCCTTCHH
T ss_pred CCCCChHH
Confidence 99987653
No 130
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.17 E-value=7e-06 Score=81.47 Aligned_cols=97 Identities=13% Similarity=0.028 Sum_probs=75.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEcCcC------------Ccc-----CcHHHHHHHHHhhhcCCeEE-cceEE
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYSRRL------------LKH-----FDQEMVRILLSSLTKAGVSI-QCCVI 303 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~------------l~~-----~~~~~~~~~~~~l~~~gV~i-~~~~v 303 (535)
.+|+|||+|+.|+.+|..|++.|.+|+++++..+ .+. ..+++.+.+.+.+++.|+++ .+. +
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v 84 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDH-I 84 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCC-E
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEee-e
Confidence 4799999999999999999999999999985211 111 23567777788888899999 876 8
Q ss_pred EEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 304 EKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 304 ~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
+.++.. ++.+.+ +. +|+ ++.+|.+++|+|..|....
T Consensus 85 ~~i~~~-~~~~~v-~~---~~~--~~~~~~lv~AtG~~~~~~~ 120 (320)
T 1trb_A 85 NKVDLQ-NRPFRL-NG---DNG--EYTCDALIIATGASARYLG 120 (320)
T ss_dssp EEEECS-SSSEEE-EE---SSC--EEEEEEEEECCCEEECCCC
T ss_pred eEEEec-CCEEEE-Ee---CCC--EEEcCEEEECCCCCcCCCC
Confidence 888765 355555 43 566 7999999999999887543
No 131
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.17 E-value=3.7e-06 Score=84.06 Aligned_cols=97 Identities=13% Similarity=0.014 Sum_probs=75.1
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-----CcC------------Ccc-----CcHHHHHHHHHhhhcCCeEE-
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-----RRL------------LKH-----FDQEMVRILLSSLTKAGVSI- 298 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-----~~~------------l~~-----~~~~~~~~~~~~l~~~gV~i- 298 (535)
.+|+|||||+.|+.+|..|++.|.+|+++++ ..+ .+. ...++...+.+.+++.|+++
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~ 88 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTIF 88 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCEEE
Confidence 4799999999999999999999999999986 111 111 12467777888888899999
Q ss_pred cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 299 QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 299 ~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
.+. +..++.. ++.+.|++ +|+ ++.+|.+++|+|..|....
T Consensus 89 ~~~-v~~i~~~-~~~~~v~~----~~~--~~~~~~vv~A~G~~~~~~~ 128 (333)
T 1vdc_A 89 TET-VTKVDFS-SKPFKLFT----DSK--AILADAVILAIGAVAKRLS 128 (333)
T ss_dssp CCC-CCEEECS-SSSEEEEC----SSE--EEEEEEEEECCCEEECCCC
T ss_pred EeE-EEEEEEc-CCEEEEEE----CCc--EEEcCEEEECCCCCcCCCC
Confidence 876 8888765 34455654 455 7999999999999876543
No 132
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.16 E-value=9.3e-07 Score=92.29 Aligned_cols=95 Identities=19% Similarity=0.184 Sum_probs=68.6
Q ss_pred CCcEEEECCChHHHHHHHHHHhCC--CcEEEEEc-CcCC--ccCc---------HHHHHHHHHhhhcCCeEEcceEEEEE
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLG--VPVTLVYS-RRLL--KHFD---------QEMVRILLSSLTKAGVSIQCCVIEKV 306 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g--~~Vtlv~~-~~~l--~~~~---------~~~~~~~~~~l~~~gV~i~~~~v~~i 306 (535)
.|+|||||||+.|+.+|..|++++ .+||||++ +... |.+. +++...+.+.+++.||++...++++|
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~~v~~I 81 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESI 81 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSCEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEeEEEEE
Confidence 478999999999999999999876 68999998 5432 2111 11111234456777999933378999
Q ss_pred EEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCC
Q psy14461 307 ISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFD 343 (535)
Q Consensus 307 ~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~ 343 (535)
+.+ ..+|++ .+|+ ++++|.+++|+|.++.
T Consensus 82 d~~---~~~V~~---~~g~--~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 82 DPD---ANTVTT---QSGK--KIEYDYLVIATGPKLV 110 (430)
T ss_dssp ETT---TTEEEE---TTCC--EEECSEEEECCCCEEE
T ss_pred ECC---CCEEEE---CCCC--EEECCEEEEeCCCCcc
Confidence 864 235666 3787 8999999999998764
No 133
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.16 E-value=6.7e-06 Score=81.37 Aligned_cols=99 Identities=16% Similarity=0.060 Sum_probs=72.2
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEEc-Cc----C---C---------cc-----CcHHHHHHHHHhhhcCCeEEcc
Q psy14461 243 KTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RR----L---L---------KH-----FDQEMVRILLSSLTKAGVSIQC 300 (535)
Q Consensus 243 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~----~---l---------~~-----~~~~~~~~~~~~l~~~gV~i~~ 300 (535)
.|+|||||+.|+.+|..++++|.+|+++++ .. + + +. ..+++.+.+.+.+++.++++..
T Consensus 6 DvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~~~~ 85 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTIIT 85 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEEC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcEEEE
Confidence 699999999999999999999999999987 31 1 0 11 1256777788888888999833
Q ss_pred eEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCC
Q psy14461 301 CVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAAL 347 (535)
Q Consensus 301 ~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l 347 (535)
..+..+... .+...+.. .++. ++.+|.+++|||.+|....+
T Consensus 86 ~~v~~~~~~-~~~~~~~~---~~~~--~~~~~~liiATG~~~~~~~i 126 (314)
T 4a5l_A 86 ETIDHVDFS-TQPFKLFT---EEGK--EVLTKSVIIATGATAKRMHV 126 (314)
T ss_dssp CCEEEEECS-SSSEEEEE---TTCC--EEEEEEEEECCCEEECCCCC
T ss_pred eEEEEeecC-CCceEEEE---CCCe--EEEEeEEEEcccccccccCC
Confidence 345555443 23344444 3565 89999999999998875443
No 134
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.16 E-value=6.3e-06 Score=85.35 Aligned_cols=97 Identities=10% Similarity=0.095 Sum_probs=71.5
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCc--EEEEEc-CcCC---ccCcHHHHH---------HHHHhhhcCCeEE-cceEEEE
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVP--VTLVYS-RRLL---KHFDQEMVR---------ILLSSLTKAGVSI-QCCVIEK 305 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~--Vtlv~~-~~~l---~~~~~~~~~---------~~~~~l~~~gV~i-~~~~v~~ 305 (535)
++|+|||||+.|+.+|..|++.|.+ |+++++ +.+. +.+...+.. ...+.+++.||++ .+++++.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 82 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEADWYGEARIDMLTGPEVTA 82 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCBSSCTTHHHHTTCEEEESCCEEE
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHhcCCHHHHHHCCCEEEeCCEEEE
Confidence 5899999999999999999999987 999998 4321 122221111 1123456679999 9999999
Q ss_pred EEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 306 VISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 306 i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
++.. ...|.+ .+|+ ++.+|.+++|+|.+|....
T Consensus 83 id~~---~~~v~~---~~g~--~~~~d~lvlAtG~~p~~~~ 115 (410)
T 3ef6_A 83 LDVQ---TRTISL---DDGT--TLSADAIVIATGSRARTMA 115 (410)
T ss_dssp EETT---TTEEEE---TTSC--EEECSEEEECCCEEECCCC
T ss_pred EECC---CCEEEE---CCCC--EEECCEEEEccCCcccCCC
Confidence 9754 235666 3676 8999999999999887653
No 135
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.16 E-value=8.6e-06 Score=87.43 Aligned_cols=100 Identities=16% Similarity=0.125 Sum_probs=77.9
Q ss_pred CcEEEECCChHHHHHHHHHH-hCCCcEEEEEc-CcCC--------cc-----------------------------CcHH
Q psy14461 242 GKTLVLGGSLMAVEIAATLN-FLGVPVTLVYS-RRLL--------KH-----------------------------FDQE 282 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~-~~g~~Vtlv~~-~~~l--------~~-----------------------------~~~~ 282 (535)
.+|+|||||+.|+.+|..|+ +.|.+|+|+++ +.+. |. ..++
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~e 88 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPE 88 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHHH
Confidence 47999999999999999999 89999999998 5431 00 0246
Q ss_pred HHHHHHHhhhcCCe--EE-cceEEEEEEEeCC-CcEEEEEecCCCCCceEEEcCEEEEccCC--CCCCCC
Q psy14461 283 MVRILLSSLTKAGV--SI-QCCVIEKVISSFD-GMKGVRGFHPESKEPFADVFKTVVNAMEK--KFDFAA 346 (535)
Q Consensus 283 ~~~~~~~~l~~~gV--~i-~~~~v~~i~~~~~-~~~~v~~~~~~~G~~~~~~~D~vi~a~G~--~p~~~~ 346 (535)
+.+++.+..++.|+ .+ .+++|++++.+++ +.+.|++ .+|+ ++.+|.||+|+|. +|....
T Consensus 89 i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~---~~G~--~i~ad~lV~AtG~~s~p~~p~ 153 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTT---DHGE--VYRAKYVVNAVGLLSAINFPN 153 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEE---TTSC--EEEEEEEEECCCSCCSBCCCC
T ss_pred HHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEE---cCCC--EEEeCEEEECCcccccCCCCC
Confidence 67778888888888 78 8999999987633 2456776 3677 7999999999994 665443
No 136
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.15 E-value=4.7e-06 Score=84.98 Aligned_cols=98 Identities=17% Similarity=0.114 Sum_probs=70.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCC---ccCc---------HHHHHHHHHhhhcCCeEE-cceEEEE
Q psy14461 240 WPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLL---KHFD---------QEMVRILLSSLTKAGVSI-QCCVIEK 305 (535)
Q Consensus 240 ~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l---~~~~---------~~~~~~~~~~l~~~gV~i-~~~~v~~ 305 (535)
.+.+++|||||+.|+.+|..|+++| +|+++++ +.+. +.+. +++.....+.+++.||++ .+++++.
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v~~ 85 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAKL 85 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSCCEEE
T ss_pred CCCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECCEEEE
Confidence 3578999999999999999999999 9999998 5321 1110 111111234456679999 9988998
Q ss_pred EEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCC
Q psy14461 306 VISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAAL 347 (535)
Q Consensus 306 i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l 347 (535)
++.. ...|+ . +|+ ++++|.+++|||.+|+...+
T Consensus 86 id~~---~~~V~-~---~g~--~~~~d~lViATGs~p~~p~i 118 (367)
T 1xhc_A 86 IDRG---RKVVI-T---EKG--EVPYDTLVLATGARAREPQI 118 (367)
T ss_dssp EETT---TTEEE-E---SSC--EEECSEEEECCCEEECCCCS
T ss_pred EECC---CCEEE-E---CCc--EEECCEEEECCCCCCCCCCC
Confidence 8753 23454 3 566 79999999999999876543
No 137
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.15 E-value=3.7e-06 Score=88.27 Aligned_cols=100 Identities=10% Similarity=0.055 Sum_probs=72.0
Q ss_pred CcEEEECCChHHHHHHHHHHhC--CCcEEEEEc-CcCC--c-cC----c------HHHHHHHHHhhhcCCeEE-cceEEE
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFL--GVPVTLVYS-RRLL--K-HF----D------QEMVRILLSSLTKAGVSI-QCCVIE 304 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~--g~~Vtlv~~-~~~l--~-~~----~------~~~~~~~~~~l~~~gV~i-~~~~v~ 304 (535)
++|+|||||+.|+.+|..|++. |.+|+++++ +.+. + .. . .++.....+.+++.|+++ .+.+++
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~ 82 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVV 82 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 5899999999999999999998 899999998 5432 1 11 0 111111345567789999 999999
Q ss_pred EEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 305 KVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 305 ~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
+++.. ++.+.+.. +++..++.+|.+++|+|.+|....
T Consensus 83 ~id~~-~~~v~v~~----~~~~~~~~~d~lviAtG~~p~~p~ 119 (452)
T 3oc4_A 83 AMDVE-NQLIAWTR----KEEQQWYSYDKLILATGASQFSTQ 119 (452)
T ss_dssp EEETT-TTEEEEEE----TTEEEEEECSEEEECCCCCBCCCC
T ss_pred EEECC-CCEEEEEe----cCceEEEEcCEEEECCCcccCCCC
Confidence 99865 34455542 223348999999999999987653
No 138
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.13 E-value=1.1e-05 Score=83.30 Aligned_cols=96 Identities=19% Similarity=0.140 Sum_probs=74.0
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCc-----------------c-------------------------
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLK-----------------H------------------------- 278 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~-----------------~------------------------- 278 (535)
.+|+|||||+.|+.+|..|++.|.+|+++++ +.+.. .
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDFI 84 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHHH
Confidence 3699999999999999999999999999998 54310 0
Q ss_pred ----------------------CcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeC---CCcEEEEEecCCCCCceEEEcC
Q psy14461 279 ----------------------FDQEMVRILLSSLTKAGVSI-QCCVIEKVISSF---DGMKGVRGFHPESKEPFADVFK 332 (535)
Q Consensus 279 ----------------------~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~---~~~~~v~~~~~~~G~~~~~~~D 332 (535)
...++.+.+.+.+++.||++ .++.++++..++ ++.+.|+. .+| ++.+|
T Consensus 85 ~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~---~~g---~i~ad 158 (401)
T 2gqf_A 85 SLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQV---NST---QWQCK 158 (401)
T ss_dssp HHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEE---TTE---EEEES
T ss_pred HHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEE---CCC---EEECC
Confidence 12344566777778889999 999999998641 13456655 234 69999
Q ss_pred EEEEccCCCCC
Q psy14461 333 TVVNAMEKKFD 343 (535)
Q Consensus 333 ~vi~a~G~~p~ 343 (535)
.||+|+|..+.
T Consensus 159 ~VVlAtG~~s~ 169 (401)
T 2gqf_A 159 NLIVATGGLSM 169 (401)
T ss_dssp EEEECCCCSSC
T ss_pred EEEECCCCccC
Confidence 99999999884
No 139
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.13 E-value=3.9e-06 Score=87.59 Aligned_cols=99 Identities=13% Similarity=0.098 Sum_probs=72.1
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCC--cEEEEEc-CcCC---ccCcH----------HHHHHHHHhhhcCCeEE-cceEE
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGV--PVTLVYS-RRLL---KHFDQ----------EMVRILLSSLTKAGVSI-QCCVI 303 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~--~Vtlv~~-~~~l---~~~~~----------~~~~~~~~~l~~~gV~i-~~~~v 303 (535)
..+|+|||||+.|+.+|..|++.|. +|+++++ +.+. +.+.. ++.....+.+++.||++ .++.+
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 83 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGTQV 83 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSCCE
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCCEE
Confidence 3689999999999999999999997 7999998 4321 11111 11111134556789999 99999
Q ss_pred EEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCC
Q psy14461 304 EKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAAL 347 (535)
Q Consensus 304 ~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l 347 (535)
+.++.. + ..|++. +|+ ++.+|.+++|+|.+|+...+
T Consensus 84 ~~i~~~-~--~~v~~~---~g~--~~~~d~lviAtG~~p~~~~i 119 (431)
T 1q1r_A 84 TAINRD-R--QQVILS---DGR--ALDYDRLVLATGGRPRPLPV 119 (431)
T ss_dssp EEEETT-T--TEEEET---TSC--EEECSEEEECCCEEECCCGG
T ss_pred EEEECC-C--CEEEEC---CCC--EEECCEEEEcCCCCccCCCC
Confidence 999864 2 256663 676 79999999999999876543
No 140
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.13 E-value=1.6e-06 Score=90.35 Aligned_cols=96 Identities=19% Similarity=0.196 Sum_probs=70.5
Q ss_pred CCcEEEECCChHHHHHHHHHHh--CCCcEEEEEc-CcCCc--cC---------cHHHHHHHHHhhhcCCeEE-cceEEEE
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNF--LGVPVTLVYS-RRLLK--HF---------DQEMVRILLSSLTKAGVSI-QCCVIEK 305 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~-~~~l~--~~---------~~~~~~~~~~~l~~~gV~i-~~~~v~~ 305 (535)
.++|+|||||+.|+.+|..|++ .|.+|+++++ +.+.- .+ ..++...+.+.+++.||++ .. +++.
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~ 80 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAES 80 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEE
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEE-EEEE
Confidence 3689999999999999999999 7899999998 55421 10 1111222344566789999 64 8888
Q ss_pred EEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCC
Q psy14461 306 VISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFA 345 (535)
Q Consensus 306 i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~ 345 (535)
++.+ + ..|++ .+|+ ++.+|.+++|+|.+|+.+
T Consensus 81 id~~--~-~~v~~---~~g~--~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 81 IDPD--A-NTVTT---QSGK--KIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp EETT--T-TEEEE---TTCC--EEECSEEEECCCCEEECC
T ss_pred EECC--C-CEEEE---CCCc--EEECCEEEEcCCcccccC
Confidence 8754 2 25666 3676 799999999999998765
No 141
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.12 E-value=1.6e-05 Score=82.28 Aligned_cols=99 Identities=12% Similarity=0.017 Sum_probs=74.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCC--------cc----------------------------------
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLL--------KH---------------------------------- 278 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l--------~~---------------------------------- 278 (535)
.+|+|||||.+|+-+|..|++.|.+|+|+++ +.+. +.
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEIA 85 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCeeE
Confidence 4799999999999999999999999999998 4110 00
Q ss_pred -----------------C-cHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccC
Q psy14461 279 -----------------F-DQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAME 339 (535)
Q Consensus 279 -----------------~-~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G 339 (535)
. ...+.+.+.+.+++.|+++ .+++|++++.+ ++...+.+.. .+|+..++.+|.||.|+|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~-~~~~~v~v~~-~~g~~~~~~a~~vV~A~G 163 (421)
T 3nix_A 86 DFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFF-GTDSVTTIED-INGNKREIEARFIIDASG 163 (421)
T ss_dssp EEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEE-TTEEEEEEEE-TTSCEEEEEEEEEEECCG
T ss_pred EEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEe-CCEEEEEEEc-CCCCEEEEEcCEEEECCC
Confidence 0 0234455666666779999 99999999876 3444444432 477766799999999999
Q ss_pred CCC
Q psy14461 340 KKF 342 (535)
Q Consensus 340 ~~p 342 (535)
..+
T Consensus 164 ~~s 166 (421)
T 3nix_A 164 YGR 166 (421)
T ss_dssp GGC
T ss_pred Cch
Confidence 765
No 142
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.11 E-value=1.1e-05 Score=82.64 Aligned_cols=102 Identities=9% Similarity=-0.029 Sum_probs=77.1
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcC-----Cc--c-----------------------------------
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRL-----LK--H----------------------------------- 278 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~-----l~--~----------------------------------- 278 (535)
.+|+|||||++|+.+|..|++.|.+|+|+++ +.. .. .
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 82 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQ 82 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCc
Confidence 3699999999999999999999999999998 531 00 0
Q ss_pred ------------------CcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccC
Q psy14461 279 ------------------FDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAME 339 (535)
Q Consensus 279 ------------------~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G 339 (535)
...++.+.+.+.+.+.|+++ .++++++++.++++.+.|++.. +|++.++.+|+||.|.|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~--~g~~~~~~a~~vV~AdG 160 (394)
T 1k0i_A 83 RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFER--DGERLRLDCDYIAGCDG 160 (394)
T ss_dssp EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEE--TTEEEEEECSEEEECCC
T ss_pred eEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEec--CCcEEEEEeCEEEECCC
Confidence 01234455666666779999 9999999986523456777732 67655799999999999
Q ss_pred CCCCCC
Q psy14461 340 KKFDFA 345 (535)
Q Consensus 340 ~~p~~~ 345 (535)
......
T Consensus 161 ~~S~vr 166 (394)
T 1k0i_A 161 FHGISR 166 (394)
T ss_dssp TTCSTG
T ss_pred CCcHHH
Confidence 987653
No 143
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.11 E-value=1.8e-05 Score=85.95 Aligned_cols=34 Identities=15% Similarity=0.107 Sum_probs=30.5
Q ss_pred EEEEeeCCccHHHHHHHHHhhCC--CeEEEEecCCc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQ--RRDELQERGSH 122 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~--~~V~lie~~~~ 122 (535)
.+|+|||+|++|+.+|+.+...+ .+|+|+||...
T Consensus 6 ~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~ 41 (602)
T 1kf6_A 6 ADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYP 41 (602)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCG
T ss_pred CCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCC
Confidence 57899999999999999888777 89999999864
No 144
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.10 E-value=5.6e-06 Score=87.35 Aligned_cols=103 Identities=14% Similarity=0.084 Sum_probs=65.0
Q ss_pred CCcEEEECCChHHHHHHHHHHhC--CCcEEEEEc-CcC------Ccc-C------cHHH-------HHHHHHhhhcCCeE
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFL--GVPVTLVYS-RRL------LKH-F------DQEM-------VRILLSSLTKAGVS 297 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~--g~~Vtlv~~-~~~------l~~-~------~~~~-------~~~~~~~l~~~gV~ 297 (535)
.++|+|||||+.|+.+|..|++. |.+|+++++ +.+ ++. + ..++ ........++.|++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 36899999999999999999998 899999998 553 111 1 1111 11222222357999
Q ss_pred E-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 298 I-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 298 i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
+ .++++++++.. +..+.+.. ..+|+..++.+|.+++|+|.+|....
T Consensus 83 ~~~~~~V~~id~~-~~~v~~~~--~~~g~~~~~~~d~lviAtG~~p~~p~ 129 (472)
T 3iwa_A 83 ALVETRAHAIDRA-AHTVEIEN--LRTGERRTLKYDKLVLALGSKANRPP 129 (472)
T ss_dssp EECSEEEEEEETT-TTEEEEEE--TTTCCEEEEECSEEEECCCEEECCCS
T ss_pred EEECCEEEEEECC-CCEEEEee--cCCCCEEEEECCEEEEeCCCCcCCCC
Confidence 9 99999999865 34333332 12466568999999999999887643
No 145
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.10 E-value=5e-06 Score=87.18 Aligned_cols=99 Identities=15% Similarity=0.149 Sum_probs=68.0
Q ss_pred CCcEEEECCChHHHHHHHHHHhC--CCcEEEEEc-CcCC------ccC------cHHHHHHHHHhh-hcCCeEE-cceEE
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFL--GVPVTLVYS-RRLL------KHF------DQEMVRILLSSL-TKAGVSI-QCCVI 303 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~--g~~Vtlv~~-~~~l------~~~------~~~~~~~~~~~l-~~~gV~i-~~~~v 303 (535)
.++|+|||||+.|+.+|..|++. +.+|+++++ +.+. |.+ ..++.....+.+ ++.||++ .++++
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v 82 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEV 82 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEEETTCEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCEE
Confidence 36899999999999999999998 789999998 5431 111 111222222334 5789999 99999
Q ss_pred EEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 304 EKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 304 ~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
+.++. +...|.+ .+| +.++.+|.+++|+|.+|....
T Consensus 83 ~~i~~---~~~~v~~---~~g-~~~~~~d~lviAtG~~p~~p~ 118 (449)
T 3kd9_A 83 IEVDT---GYVRVRE---NGG-EKSYEWDYLVFANGASPQVPA 118 (449)
T ss_dssp EEECS---SEEEEEC---SSS-EEEEECSEEEECCCEEECCCS
T ss_pred EEEec---CCCEEEE---CCc-eEEEEcCEEEECCCCCCCCCC
Confidence 99864 2344544 233 347999999999999887543
No 146
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.10 E-value=1.5e-05 Score=81.94 Aligned_cols=98 Identities=18% Similarity=0.126 Sum_probs=72.2
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCcc------CcHHHHHHHHH------------------------
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKH------FDQEMVRILLS------------------------ 289 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~------~~~~~~~~~~~------------------------ 289 (535)
..+|+|||||+.|+.+|..|++.|.+|+|+++ +.+.+. +.+...+.+.+
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 84 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTGE 84 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCCC
Confidence 46899999999999999999999999999998 553211 23332222221
Q ss_pred -------------------hhhc--CCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCC
Q psy14461 290 -------------------SLTK--AGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDF 344 (535)
Q Consensus 290 -------------------~l~~--~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~ 344 (535)
.|.+ .|+++ .++++++++.+ ++.+.|++. +|+ ++.+|+||.|.|.....
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~-~~~v~v~~~---~g~--~~~ad~vV~AdG~~S~v 155 (397)
T 2vou_A 85 RVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQD-SETVQMRFS---DGT--KAEANWVIGADGGASVV 155 (397)
T ss_dssp EEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEEC-SSCEEEEET---TSC--EEEESEEEECCCTTCHH
T ss_pred ccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEec-CCEEEEEEC---CCC--EEECCEEEECCCcchhH
Confidence 1111 37888 99999999876 456777773 676 79999999999987653
No 147
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.10 E-value=1.1e-05 Score=84.35 Aligned_cols=102 Identities=9% Similarity=0.116 Sum_probs=69.9
Q ss_pred cEEEECCChHHHHHHHHHHhCC--CcEEEEEc-CcCC--c-cCcHHH-----------HHHHHHhhhcCCeEE-cceEEE
Q psy14461 243 KTLVLGGSLMAVEIAATLNFLG--VPVTLVYS-RRLL--K-HFDQEM-----------VRILLSSLTKAGVSI-QCCVIE 304 (535)
Q Consensus 243 ~vvViGgG~~g~e~A~~l~~~g--~~Vtlv~~-~~~l--~-~~~~~~-----------~~~~~~~l~~~gV~i-~~~~v~ 304 (535)
||+|||||+.|+.+|..|+++| .+|+++++ +... + .++..+ .....+.+++.+|++ .+.+++
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V~ 81 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKTYHEVI 81 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEEETEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEEeCCeEE
Confidence 5999999999999999999988 57999998 5321 0 111000 001123345679999 999999
Q ss_pred EEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCC
Q psy14461 305 KVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAAL 347 (535)
Q Consensus 305 ~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l 347 (535)
.|+.. ...+.+... .+++..++.+|.+++|||.+|+...+
T Consensus 82 ~id~~-~~~~~~~~~--~~~~~~~~~yd~lVIATGs~p~~p~i 121 (437)
T 4eqs_A 82 AINDE-RQTVSVLNR--KTNEQFEESYDKLILSPGASANSLGF 121 (437)
T ss_dssp EEETT-TTEEEEEET--TTTEEEEEECSEEEECCCEEECCCCC
T ss_pred EEEcc-CcEEEEEec--cCCceEEEEcCEEEECCCCccccccc
Confidence 99864 233333332 34555579999999999999876543
No 148
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.09 E-value=4.3e-06 Score=90.79 Aligned_cols=103 Identities=14% Similarity=0.199 Sum_probs=74.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhC--CCcEEEEEc-CcCC-cc--C-----------cHHHHHHHHHhhhcCCeEE-cceE
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFL--GVPVTLVYS-RRLL-KH--F-----------DQEMVRILLSSLTKAGVSI-QCCV 302 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~--g~~Vtlv~~-~~~l-~~--~-----------~~~~~~~~~~~l~~~gV~i-~~~~ 302 (535)
.++|+|||||+.|+.+|..|++. |.+|+++++ +.+. .. + +..+...+....++.|+++ .+++
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~~~~ 115 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLSE 115 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEECSEE
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEECCE
Confidence 47899999999999999999998 889999999 5431 00 0 1112223444556779999 9999
Q ss_pred EEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 303 IEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 303 v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
+++++.. ++.+.+.. ..+|+..++.+|.+++|+|.+|....
T Consensus 116 V~~id~~-~~~v~v~~--~~~g~~~~~~~d~lviAtG~~p~~p~ 156 (588)
T 3ics_A 116 VVKINKE-EKTITIKN--VTTNETYNEAYDVLILSPGAKPIVPS 156 (588)
T ss_dssp EEEEETT-TTEEEEEE--TTTCCEEEEECSEEEECCCEEECCCC
T ss_pred EEEEECC-CCEEEEee--cCCCCEEEEeCCEEEECCCCCCCCCC
Confidence 9999865 34344432 23566567899999999999887653
No 149
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.08 E-value=1.3e-05 Score=84.18 Aligned_cols=103 Identities=10% Similarity=-0.005 Sum_probs=75.3
Q ss_pred cEEEECCChHHHHHHHHHHhCC-----CcEEEEEc-CcCC--c-------c-----------------------------
Q psy14461 243 KTLVLGGSLMAVEIAATLNFLG-----VPVTLVYS-RRLL--K-------H----------------------------- 278 (535)
Q Consensus 243 ~vvViGgG~~g~e~A~~l~~~g-----~~Vtlv~~-~~~l--~-------~----------------------------- 278 (535)
+|+|||||+.|+.+|..|++.| .+|+++++ +.+. + .
T Consensus 32 dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~~~~ 111 (463)
T 3s5w_A 32 DLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHKHD 111 (463)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHHHTT
T ss_pred CEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhhhcC
Confidence 7999999999999999999999 99999998 6321 0 0
Q ss_pred -------------CcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCC-Cc---EEEEEecCCCCCceEEEcCEEEEccCC
Q psy14461 279 -------------FDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFD-GM---KGVRGFHPESKEPFADVFKTVVNAMEK 340 (535)
Q Consensus 279 -------------~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~-~~---~~v~~~~~~~G~~~~~~~D~vi~a~G~ 340 (535)
...++.+++....++.++++ .+++|++++..++ ++ +.|++.+ .+|++.++.+|.||+|+|.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~-g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 112 RLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRN-ADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp CHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEE-TTSCEEEEEESEEEECCCC
T ss_pred ceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEec-CCCceEEEEeCEEEECCCC
Confidence 02344555666666778899 9999999976411 22 3565543 2355457999999999999
Q ss_pred CCCCCC
Q psy14461 341 KFDFAA 346 (535)
Q Consensus 341 ~p~~~~ 346 (535)
.|..+.
T Consensus 191 ~p~~p~ 196 (463)
T 3s5w_A 191 TPRIPQ 196 (463)
T ss_dssp EECCCG
T ss_pred CCCCcc
Confidence 887543
No 150
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.08 E-value=6.5e-06 Score=85.05 Aligned_cols=96 Identities=11% Similarity=0.120 Sum_probs=70.5
Q ss_pred CcEEEECCChHHHHHHHHHHhCCC--cEEEEEc-CcCC---ccCc----------HHHHHHHHHhhhcCCeEE-cceEEE
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGV--PVTLVYS-RRLL---KHFD----------QEMVRILLSSLTKAGVSI-QCCVIE 304 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~--~Vtlv~~-~~~l---~~~~----------~~~~~~~~~~l~~~gV~i-~~~~v~ 304 (535)
++|+|||||+.|+.+|..|++.|. +|+++++ +.+. +.+. .++.....+.+.+.+|++ . .+++
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~-~~v~ 80 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELIS-DRMV 80 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEEC-CCEE
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEE-EEEE
Confidence 689999999999999999999998 8999998 4221 1111 111122334556789999 8 8999
Q ss_pred EEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 305 KVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 305 ~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
.++.. + ..|.+. +|+ ++.+|.+++|+|.+|....
T Consensus 81 ~id~~--~-~~v~~~---~g~--~~~~d~lvlAtG~~p~~~~ 114 (404)
T 3fg2_P 81 SIDRE--G-RKLLLA---SGT--AIEYGHLVLATGARNRMLD 114 (404)
T ss_dssp EEETT--T-TEEEES---SSC--EEECSEEEECCCEEECCCC
T ss_pred EEECC--C-CEEEEC---CCC--EEECCEEEEeeCCCccCCC
Confidence 99754 2 256663 676 8999999999999877543
No 151
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.07 E-value=1.6e-05 Score=85.08 Aligned_cols=100 Identities=14% Similarity=0.162 Sum_probs=78.2
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-C--cCC-----------c-cCcHHHHHHHHHhhhcCCeEE-cceEEE
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-R--RLL-----------K-HFDQEMVRILLSSLTKAGVSI-QCCVIE 304 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~--~~l-----------~-~~~~~~~~~~~~~l~~~gV~i-~~~~v~ 304 (535)
..+|+|||||+.|+.+|..|++.|.+|+++++ . ... + ...+++...+.+.+++.|+++ .+++++
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~ 291 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQSAS 291 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECSCCEE
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcCCEEE
Confidence 45799999999999999999999999999975 1 111 0 123577788888888999999 999999
Q ss_pred EEEEeC--CCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCC
Q psy14461 305 KVISSF--DGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFA 345 (535)
Q Consensus 305 ~i~~~~--~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~ 345 (535)
.++.+. ++...|++ .+|+ ++.+|.+++|+|.+|...
T Consensus 292 ~i~~~~~~~~~~~V~~---~~g~--~~~~d~vVlAtG~~~~~~ 329 (521)
T 1hyu_A 292 KLVPAATEGGLHQIET---ASGA--VLKARSIIIATGAKWRNM 329 (521)
T ss_dssp EEECCSSTTSCEEEEE---TTSC--EEEEEEEEECCCEEECCC
T ss_pred EEEeccCCCceEEEEE---CCCC--EEEcCEEEECCCCCcCCC
Confidence 997531 12466776 3676 799999999999887643
No 152
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.06 E-value=3.9e-06 Score=90.62 Aligned_cols=102 Identities=10% Similarity=0.043 Sum_probs=71.3
Q ss_pred CcEEEECCChHHHHHHHHHHhC--CCcEEEEEc-CcCC-cc--Cc----------H-HHHHHHHHhhhcCCeEE-cceEE
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFL--GVPVTLVYS-RRLL-KH--FD----------Q-EMVRILLSSLTKAGVSI-QCCVI 303 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~--g~~Vtlv~~-~~~l-~~--~~----------~-~~~~~~~~~l~~~gV~i-~~~~v 303 (535)
++|+|||||+.|+.+|..|++. +.+|+++++ +.+. .. ++ . .+........++.|+++ .+++|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V 81 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHEV 81 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECCEE
Confidence 5799999999999999999998 789999998 5431 10 00 0 01111222333468999 99999
Q ss_pred EEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 304 EKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 304 ~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
++++.. .+.+. +.+..+|+..++.+|.+++|||.+|....
T Consensus 82 ~~id~~-~~~v~--~~~~~~g~~~~~~~d~lviAtG~~p~~p~ 121 (565)
T 3ntd_A 82 VAIDRA-AKLVT--VRRLLDGSEYQESYDTLLLSPGAAPIVPP 121 (565)
T ss_dssp EEEETT-TTEEE--EEETTTCCEEEEECSEEEECCCEEECCCC
T ss_pred EEEECC-CCEEE--EEecCCCCeEEEECCEEEECCCCCCCCCC
Confidence 999865 34333 33223466568999999999999887654
No 153
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.06 E-value=1.2e-05 Score=83.31 Aligned_cols=36 Identities=11% Similarity=0.012 Sum_probs=32.5
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLS 124 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~ 124 (535)
++|+|||+|++|+.+|+.+...+.+|+|+|+.+.++
T Consensus 28 ~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g 63 (417)
T 3v76_A 28 QDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPG 63 (417)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 578999999999999999988899999999998653
No 154
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.06 E-value=9.4e-06 Score=87.21 Aligned_cols=100 Identities=13% Similarity=0.082 Sum_probs=75.5
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCC--------c-----------------------------cCcHHH
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLL--------K-----------------------------HFDQEM 283 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l--------~-----------------------------~~~~~~ 283 (535)
.+|+|||||+.|+.+|..|++.|.+|+|+++ +.+. | ...+++
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ei 89 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPEM 89 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHHH
Confidence 4799999999999999999999999999998 5431 0 013567
Q ss_pred HHHHHHhhhcCCe--EE-cceEEEEEEEeCC-CcEEEEEecCCCCCceEEEcCEEEEccC--CCCCCCC
Q psy14461 284 VRILLSSLTKAGV--SI-QCCVIEKVISSFD-GMKGVRGFHPESKEPFADVFKTVVNAME--KKFDFAA 346 (535)
Q Consensus 284 ~~~~~~~l~~~gV--~i-~~~~v~~i~~~~~-~~~~v~~~~~~~G~~~~~~~D~vi~a~G--~~p~~~~ 346 (535)
..++.+..++.|+ .+ .+++|++++.+++ +.+.|++ .+|+ ++.+|.||+|+| .+|+...
T Consensus 90 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~---~~G~--~~~ad~lV~AtG~~s~p~~p~ 153 (545)
T 3uox_A 90 LRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTL---DNEE--VVTCRFLISATGPLSASRMPD 153 (545)
T ss_dssp HHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEE---TTTE--EEEEEEEEECCCSCBC---CC
T ss_pred HHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEE---CCCC--EEEeCEEEECcCCCCCCcCCC
Confidence 7777777777777 67 8889999876532 3456776 3676 799999999999 5666543
No 155
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.05 E-value=2.2e-05 Score=82.37 Aligned_cols=102 Identities=24% Similarity=0.210 Sum_probs=77.2
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCc----c--------------------------------------
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLK----H-------------------------------------- 278 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~----~-------------------------------------- 278 (535)
-+|+|||||+.|+.+|..|++.|.+|+|+++ +.+.. .
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQT 86 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCce
Confidence 4799999999999999999999999999998 53210 0
Q ss_pred ----------C-cHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEE-EEEecCCCCCceEEEcCEEEEccCCCCCC
Q psy14461 279 ----------F-DQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKG-VRGFHPESKEPFADVFKTVVNAMEKKFDF 344 (535)
Q Consensus 279 ----------~-~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~-v~~~~~~~G~~~~~~~D~vi~a~G~~p~~ 344 (535)
+ ...+.+.+.+.+.+.|+++ .+++++++..+ ++.+. |++....+|+..++.+|.||.|+|..+..
T Consensus 87 ~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~v 164 (453)
T 3atr_A 87 VWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFE-DGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSF 164 (453)
T ss_dssp EEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTT
T ss_pred EEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEE-CCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhh
Confidence 0 0245566667777789999 99999999876 45554 66643115655579999999999987654
No 156
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.05 E-value=2.7e-05 Score=77.74 Aligned_cols=95 Identities=15% Similarity=0.195 Sum_probs=68.5
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCc--------------------cCcHHHHHHHHH-----------
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLK--------------------HFDQEMVRILLS----------- 289 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~--------------------~~~~~~~~~~~~----------- 289 (535)
.+|+|||||.+|+.+|..|++.|.+|+|+++ +.+.. ...+.+.+.+..
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEWT 82 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEEC
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeecc
Confidence 5799999999999999999999999999998 54310 112222222221
Q ss_pred --------------------------------hhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEE-EcCEEE
Q psy14461 290 --------------------------------SLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFAD-VFKTVV 335 (535)
Q Consensus 290 --------------------------------~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~-~~D~vi 335 (535)
.+ ..|+++ .+++|++++.+ ++.+.|++ .+|+ .+ .+|.||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~g~~i~~~~~v~~i~~~-~~~~~v~~---~~g~--~~~~a~~vV 155 (336)
T 1yvv_A 83 PLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAM-RGDMPVSFSCRITEVFRG-EEHWNLLD---AEGQ--NHGPFSHVI 155 (336)
T ss_dssp CCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHH-HTTCCEECSCCEEEEEEC-SSCEEEEE---TTSC--EEEEESEEE
T ss_pred ccceeccCcccccCCCCCccEEcCccHHHHHHHH-HccCcEEecCEEEEEEEe-CCEEEEEe---CCCc--CccccCEEE
Confidence 11 237899 99999999876 45677776 3676 44 599999
Q ss_pred EccCCCCC
Q psy14461 336 NAMEKKFD 343 (535)
Q Consensus 336 ~a~G~~p~ 343 (535)
+|+|....
T Consensus 156 ~a~g~~~~ 163 (336)
T 1yvv_A 156 IATPAPQA 163 (336)
T ss_dssp ECSCHHHH
T ss_pred EcCCHHHH
Confidence 99996543
No 157
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.05 E-value=1.4e-05 Score=80.11 Aligned_cols=98 Identities=12% Similarity=0.098 Sum_probs=75.5
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEEcCcC------------CccC-----cHHHHHHHHHhhhcCCeEE-cceE
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYSRRL------------LKHF-----DQEMVRILLSSLTKAGVSI-QCCV 302 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~------------l~~~-----~~~~~~~~~~~l~~~gV~i-~~~~ 302 (535)
..+|+|||||+.|+.+|..|++.|.+|+++++..+ .+.+ .+++.+.+.+.+++.|+++ .+.
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~- 92 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRMED- 92 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEECCC-
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEEee-
Confidence 35799999999999999999999999999985111 1111 2567777778888889999 876
Q ss_pred EEEEEEeCCCcEEE-EEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 303 IEKVISSFDGMKGV-RGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 303 v~~i~~~~~~~~~v-~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
+.+++. ++.+.| .+ .+|+ ++.+|.+++|+|..|....
T Consensus 93 v~~i~~--~~~~~v~~~---~~g~--~~~~d~lviAtG~~~~~~~ 130 (335)
T 2a87_A 93 VESVSL--HGPLKSVVT---ADGQ--THRARAVILAMGAAARYLQ 130 (335)
T ss_dssp EEEEEC--SSSSEEEEE---TTSC--EEEEEEEEECCCEEECCCC
T ss_pred EEEEEe--CCcEEEEEe---CCCC--EEEeCEEEECCCCCccCCC
Confidence 888875 244556 55 3666 7999999999999887543
No 158
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.04 E-value=2.6e-06 Score=87.75 Aligned_cols=99 Identities=15% Similarity=0.169 Sum_probs=68.9
Q ss_pred CCcEEEECCChHHHHHHHHHHhCC--CcEEEEEc-CcCC-ccCcHHHHH---------HHHHhhhcCCeEEcceEEEEEE
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLG--VPVTLVYS-RRLL-KHFDQEMVR---------ILLSSLTKAGVSIQCCVIEKVI 307 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g--~~Vtlv~~-~~~l-~~~~~~~~~---------~~~~~l~~~gV~i~~~~v~~i~ 307 (535)
+|||+|||||+.|+.+|..|++.+ .+||||++ +... ......+.. .-.+.+.++||++...+++.|+
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~~v~~id 81 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHDSALGID 81 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECSCEEEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEeEEEEEE
Confidence 689999999999999999998876 58999998 5421 111111110 0012345679999444688887
Q ss_pred EeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCC
Q psy14461 308 SSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAAL 347 (535)
Q Consensus 308 ~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l 347 (535)
.+ ...|.+ .+|+ ++++|.+++|+|.+|+....
T Consensus 82 ~~---~~~v~~---~~g~--~i~yd~LviAtG~~~~~~~i 113 (401)
T 3vrd_B 82 PD---KKLVKT---AGGA--EFAYDRCVVAPGIDLLYDKI 113 (401)
T ss_dssp TT---TTEEEE---TTSC--EEECSEEEECCCEEECGGGS
T ss_pred cc---CcEEEe---cccc--eeecceeeeccCCccccCCc
Confidence 64 234555 3777 89999999999998876543
No 159
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.03 E-value=3.3e-05 Score=83.52 Aligned_cols=100 Identities=14% Similarity=0.030 Sum_probs=74.5
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCcc---------------------------------------C--
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKH---------------------------------------F-- 279 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~---------------------------------------~-- 279 (535)
.+|+|||+|..|+.+|..|++.|.+|+|+++ +.+... .
T Consensus 127 ~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~~ 206 (571)
T 1y0p_A 127 VDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNINDP 206 (571)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCH
Confidence 4799999999999999999999999999998 543110 0
Q ss_pred -----------------------------------------------cHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCC
Q psy14461 280 -----------------------------------------------DQEMVRILLSSLTKAGVSI-QCCVIEKVISSFD 311 (535)
Q Consensus 280 -----------------------------------------------~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~ 311 (535)
...+.+.+.+.+++.||++ ++++++++..+++
T Consensus 207 ~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~ 286 (571)
T 1y0p_A 207 ALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDK 286 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECTT
T ss_pred HHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCC
Confidence 0233445556667789999 9999999987632
Q ss_pred CcEE-EEEecCCCCCceEEEcCEEEEccCCCC
Q psy14461 312 GMKG-VRGFHPESKEPFADVFKTVVNAMEKKF 342 (535)
Q Consensus 312 ~~~~-v~~~~~~~G~~~~~~~D~vi~a~G~~p 342 (535)
+++. |.+.. .+|+..++.+|.||+|+|...
T Consensus 287 g~v~Gv~~~~-~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 287 GTVKGILVKG-MYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp SCEEEEEEEE-TTTEEEEEECSEEEECCCCCT
T ss_pred CeEEEEEEEe-CCCcEEEEECCeEEEeCCCcc
Confidence 5543 55542 267656799999999998754
No 160
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.03 E-value=2e-05 Score=78.09 Aligned_cols=96 Identities=8% Similarity=0.008 Sum_probs=68.4
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEEcCcC----C--------cc----CcHHHHHHHHHhhhcCCeEE-cceEEEE
Q psy14461 243 KTLVLGGSLMAVEIAATLNFLGVPVTLVYSRRL----L--------KH----FDQEMVRILLSSLTKAGVSI-QCCVIEK 305 (535)
Q Consensus 243 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~----l--------~~----~~~~~~~~~~~~l~~~gV~i-~~~~v~~ 305 (535)
.|+|||||+.|+.+|..|+++|.+|++++++.+ + |. ..+++.........+.++.+ .+.....
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSV 87 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEECCCCEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccceeeeee
Confidence 599999999999999999999999999997321 1 11 12566666666677777777 6655554
Q ss_pred EEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 306 VISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 306 i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
.... .. .+.. .+++ ++.+|.+++|||.+|....
T Consensus 88 ~~~~--~~-~~~~---~~~~--~~~~d~liiAtGs~~~~~~ 120 (312)
T 4gcm_A 88 EDKG--EY-KVIN---FGNK--ELTAKAVIIATGAEYKKIG 120 (312)
T ss_dssp EECS--SC-EEEE---CSSC--EEEEEEEEECCCEEECCCC
T ss_pred eeee--cc-eeec---cCCe--EEEeceeEEcccCccCcCC
Confidence 4432 22 2222 2566 8999999999999887543
No 161
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.02 E-value=2.1e-05 Score=82.42 Aligned_cols=95 Identities=27% Similarity=0.277 Sum_probs=74.2
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCc-------------------c------------------C----
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLK-------------------H------------------F---- 279 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~-------------------~------------------~---- 279 (535)
.+|+|||||..|+.+|..|++.|.+|+|+++ +.+.. . +
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNED 106 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHHH
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHHH
Confidence 5799999999999999999999999999998 53210 0 0
Q ss_pred --------------------------cHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCc-EEEEEecCCCCCceEEEc
Q psy14461 280 --------------------------DQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGM-KGVRGFHPESKEPFADVF 331 (535)
Q Consensus 280 --------------------------~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~-~~v~~~~~~~G~~~~~~~ 331 (535)
...+.+.+.+.+++.||++ .+++|+++..+ ++. +.|++ .+|+ ++.+
T Consensus 107 ~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~-~~~v~~V~~---~~G~--~i~A 180 (447)
T 2i0z_A 107 IITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYE-NGQTKAVIL---QTGE--VLET 180 (447)
T ss_dssp HHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEE---TTCC--EEEC
T ss_pred HHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEec-CCcEEEEEE---CCCC--EEEC
Confidence 0234455666777889999 99999999875 455 55666 3675 7999
Q ss_pred CEEEEccCCCC
Q psy14461 332 KTVVNAMEKKF 342 (535)
Q Consensus 332 D~vi~a~G~~p 342 (535)
|.||+|+|..+
T Consensus 181 d~VVlAtGg~s 191 (447)
T 2i0z_A 181 NHVVIAVGGKS 191 (447)
T ss_dssp SCEEECCCCSS
T ss_pred CEEEECCCCCc
Confidence 99999999877
No 162
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.00 E-value=2.5e-05 Score=81.70 Aligned_cols=102 Identities=14% Similarity=0.032 Sum_probs=72.0
Q ss_pred CcEEEECCChHHHHHHHHHHhC--CCcEEEEEc-CcCC--cc-C----------cHHHHHHHHHhhhcCCeEE-cceEEE
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFL--GVPVTLVYS-RRLL--KH-F----------DQEMVRILLSSLTKAGVSI-QCCVIE 304 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~--g~~Vtlv~~-~~~l--~~-~----------~~~~~~~~~~~l~~~gV~i-~~~~v~ 304 (535)
++|+|||||+.|+.+|..|++. |.+|+++++ +.+. +. . .+++.....+.+++.||++ .+..+.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 80 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEIT 80 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEETEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 3699999999999999999998 899999999 5431 10 0 0111112234566779999 999999
Q ss_pred EEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 305 KVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 305 ~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
.++.+ ++ .|++.+..+|+..++.+|.+++|+|.+|....
T Consensus 81 ~i~~~-~~--~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~ 119 (447)
T 1nhp_A 81 AIQPK-EH--QVTVKDLVSGEERVENYDKLIISPGAVPFELD 119 (447)
T ss_dssp EEETT-TT--EEEEEETTTCCEEEEECSEEEECCCEEECCCC
T ss_pred EEeCC-CC--EEEEEecCCCceEEEeCCEEEEcCCCCcCCCC
Confidence 99764 33 34443212465446899999999999887654
No 163
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.00 E-value=4.8e-05 Score=81.08 Aligned_cols=100 Identities=17% Similarity=0.149 Sum_probs=75.0
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcC--------Ccc----------------------------------
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRL--------LKH---------------------------------- 278 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~--------l~~---------------------------------- 278 (535)
.+|+|||||..|+-+|..|++.|.+|+|+++ +.. .+.
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~ 87 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKEP 87 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSSCS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecCCc
Confidence 4799999999999999999999999999998 511 000
Q ss_pred --------------------C-cHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEE-EEEecCCCCCceEEEcCEEE
Q psy14461 279 --------------------F-DQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKG-VRGFHPESKEPFADVFKTVV 335 (535)
Q Consensus 279 --------------------~-~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~-v~~~~~~~G~~~~~~~D~vi 335 (535)
+ ...+.+.+.+.+++.|+++ .+++|+++..+ ++.+. |++.. .+|++.++.+|+||
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~-~~~v~gv~~~~-~dG~~~~i~ad~VI 165 (512)
T 3e1t_A 88 EPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFE-GERAVGVRYRN-TEGVELMAHARFIV 165 (512)
T ss_dssp SCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEE-TTEEEEEEEEC-SSSCEEEEEEEEEE
T ss_pred cccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEE-CCEEEEEEEEe-CCCCEEEEEcCEEE
Confidence 0 0234455666677789999 99999999886 45543 55543 36765689999999
Q ss_pred EccCCCCC
Q psy14461 336 NAMEKKFD 343 (535)
Q Consensus 336 ~a~G~~p~ 343 (535)
.|+|....
T Consensus 166 ~AdG~~S~ 173 (512)
T 3e1t_A 166 DASGNRTR 173 (512)
T ss_dssp ECCCTTCS
T ss_pred ECCCcchH
Confidence 99998643
No 164
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.99 E-value=1.3e-05 Score=82.93 Aligned_cols=97 Identities=9% Similarity=0.043 Sum_probs=71.9
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCc--EEEEEc-CcCC---ccCc----------HHHHHHHHHhhhcCCeEE-cceEEE
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVP--VTLVYS-RRLL---KHFD----------QEMVRILLSSLTKAGVSI-QCCVIE 304 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~--Vtlv~~-~~~l---~~~~----------~~~~~~~~~~l~~~gV~i-~~~~v~ 304 (535)
.+|+|||||+.|+.+|..|++.|.+ |+++++ +.+. +.+. .++.....+.+++.||++ .+++++
T Consensus 10 ~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 89 (415)
T 3lxd_A 10 ADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAEVV 89 (415)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEEETCCEE
T ss_pred CcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEEeCCEEE
Confidence 5899999999999999999999976 999998 4321 1111 111122234556789999 999999
Q ss_pred EEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 305 KVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 305 ~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
.++.. ...|.+ .+|+ ++.+|.+++|+|.+|....
T Consensus 90 ~id~~---~~~v~~---~~g~--~~~~d~lvlAtG~~~~~~~ 123 (415)
T 3lxd_A 90 SLDPA---AHTVKL---GDGS--AIEYGKLIWATGGDPRRLS 123 (415)
T ss_dssp EEETT---TTEEEE---TTSC--EEEEEEEEECCCEECCCCB
T ss_pred EEECC---CCEEEE---CCCC--EEEeeEEEEccCCccCCCC
Confidence 99753 235666 3676 8999999999999887654
No 165
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.99 E-value=1.6e-05 Score=82.17 Aligned_cols=97 Identities=15% Similarity=0.054 Sum_probs=70.6
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCC--cEEEEEc-CcCC---ccCcHHHHH-HHHH-----hhhcCCeEE-cceEEEEEE
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGV--PVTLVYS-RRLL---KHFDQEMVR-ILLS-----SLTKAGVSI-QCCVIEKVI 307 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~--~Vtlv~~-~~~l---~~~~~~~~~-~~~~-----~l~~~gV~i-~~~~v~~i~ 307 (535)
..+|+|||||+.|+.+|..|++.|. +|+++++ +.+. +.+.+.+.. ...+ .+++.|+++ .+++++.++
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~ 86 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLDCKRAPEVEWLLGVTAQSFD 86 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHHHCCGGGSBCCCTTSCSCEEEETCCEEEEE
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhCCCchhhhhHHHHHHCCCEEEcCCEEEEEE
Confidence 4689999999999999999999987 5999998 5432 122222211 0001 356779999 999999987
Q ss_pred EeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCC
Q psy14461 308 SSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFA 345 (535)
Q Consensus 308 ~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~ 345 (535)
.. ...|++. +|+ ++.+|.+++|+|.+|...
T Consensus 87 ~~---~~~v~~~---~g~--~~~~d~lviAtG~~~~~~ 116 (408)
T 2gqw_A 87 PQ---AHTVALS---DGR--TLPYGTLVLATGAAPRAL 116 (408)
T ss_dssp TT---TTEEEET---TSC--EEECSEEEECCCEEECCC
T ss_pred CC---CCEEEEC---CCC--EEECCEEEECCCCCCCCC
Confidence 53 2356663 676 799999999999988764
No 166
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.99 E-value=2.5e-05 Score=79.89 Aligned_cols=97 Identities=19% Similarity=0.149 Sum_probs=74.0
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCc--------------------c-----------------------
Q psy14461 243 KTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLK--------------------H----------------------- 278 (535)
Q Consensus 243 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~--------------------~----------------------- 278 (535)
+|+|||||..|+-+|..|++.|.+|+|+++ +.+.. .
T Consensus 6 dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (397)
T 3cgv_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPII 85 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSCEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEEEE
Confidence 699999999999999999999999999998 52210 0
Q ss_pred Cc--------------HHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEE-EEEecCCCCCceEEEcCEEEEccCCCC
Q psy14461 279 FD--------------QEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKG-VRGFHPESKEPFADVFKTVVNAMEKKF 342 (535)
Q Consensus 279 ~~--------------~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~-v~~~~~~~G~~~~~~~D~vi~a~G~~p 342 (535)
++ ..+.+.+.+.+++.|+++ .+++|++++.+ ++.+. |++.. .+...++.+|.||.|.|...
T Consensus 86 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~--~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 86 LQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRH--NNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEE--TTEEEEEEEEEEEECCCTTC
T ss_pred EeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEe-CCEEEEEEEEE--CCeEEEEEcCEEEECCCcch
Confidence 00 123455666677789999 99999999876 56665 77653 33334899999999999765
No 167
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.98 E-value=2.7e-08 Score=108.69 Aligned_cols=65 Identities=11% Similarity=-0.018 Sum_probs=47.4
Q ss_pred hhcCCeEE-cceEEEEEEEeCCC-cE-EEEEecCCCCCceEEEcCEEEEccCCCCCCCCCCccccCee
Q psy14461 291 LTKAGVSI-QCCVIEKVISSFDG-MK-GVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVD 355 (535)
Q Consensus 291 l~~~gV~i-~~~~v~~i~~~~~~-~~-~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~ 355 (535)
+++.||++ +++.|++|..++++ ++ .|++.+..+|+..++.+|.||+|+|..|++.+|.+...|..
T Consensus 270 ~~~~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~sgiG~~ 337 (623)
T 3pl8_A 270 APEERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFGQL 337 (623)
T ss_dssp EEEEEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHTTTSSCC
T ss_pred ccCCCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHhcCCCcc
Confidence 34458999 99999999875322 33 46665434677778999999999999999887744444443
No 168
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=97.98 E-value=8.6e-06 Score=68.30 Aligned_cols=73 Identities=22% Similarity=0.289 Sum_probs=56.1
Q ss_pred hhHHHHhhhcCCcEEEEeCCCchhhHHHHHHHHHhcCCcceEEEEEeeCCccHHHHHHHHHhhCCCeE-EEEecCC
Q psy14461 47 PPAYISRLSYENRILIFTHAVLREENARAERYLNARGDRFAVLYLDRIGDEGILLEEELKRQTNQRRD-ELQERGS 121 (535)
Q Consensus 47 l~~~~~~~i~~~~v~v~~k~~cp~~~~~~k~~~~~~~~~~~~~~v~iiG~G~aG~~~al~~~~~~~~V-~lie~~~ 121 (535)
....+..++++++|++|++++|| +|.+++.++.+.+.++..++++....+.. +..++....+..+| +++-.+.
T Consensus 6 ~~~~~~~~i~~~~v~vy~~~~Cp-~C~~ak~~L~~~~i~~~~~dvd~~~~~~~-~~~~l~~~~g~~tvP~vfi~g~ 79 (114)
T 3h8q_A 6 LRRHLVGLIERSRVVIFSKSYCP-HSTRVKELFSSLGVECNVLELDQVDDGAR-VQEVLSEITNQKTVPNIFVNKV 79 (114)
T ss_dssp HHHHHHHHHHHCSEEEEECTTCH-HHHHHHHHHHHTTCCCEEEETTTSTTHHH-HHHHHHHHHSCCSSCEEEETTE
T ss_pred HHHHHHHHhccCCEEEEEcCCCC-cHHHHHHHHHHcCCCcEEEEecCCCChHH-HHHHHHHHhCCCccCEEEECCE
Confidence 45677889999999999999999 99999999999999887777776655444 77777666655554 4443333
No 169
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=97.98 E-value=3.2e-05 Score=78.71 Aligned_cols=97 Identities=18% Similarity=0.121 Sum_probs=72.4
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCcc------C------------------------------------
Q psy14461 243 KTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKH------F------------------------------------ 279 (535)
Q Consensus 243 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~------~------------------------------------ 279 (535)
.|+|||||+.|+-+|..|++.|.+|+|+++ +.+... +
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPII 85 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSCEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceEee
Confidence 499999999999999999999999999998 543110 0
Q ss_pred ---------------cHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEE-EEEecCCCCCceEEEcCEEEEccCCCC
Q psy14461 280 ---------------DQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKG-VRGFHPESKEPFADVFKTVVNAMEKKF 342 (535)
Q Consensus 280 ---------------~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~-v~~~~~~~G~~~~~~~D~vi~a~G~~p 342 (535)
...+...+.+...+.|+++ .+++++.+..+ ++.+. +... .+|+..++.+|+||.|.|...
T Consensus 86 ~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~-~~~~~~v~~~--~~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 86 LQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIR--HNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEE--ETTEEEEEEEEEEEECCCTTC
T ss_pred ccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeec-cceeeeeeec--ccccceEEEEeEEEeCCcccc
Confidence 0234455666667789999 99999998776 45543 3333 256656799999999999643
No 170
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=97.98 E-value=4.1e-05 Score=77.22 Aligned_cols=54 Identities=11% Similarity=-0.007 Sum_probs=41.0
Q ss_pred HHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCC
Q psy14461 286 ILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKF 342 (535)
Q Consensus 286 ~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p 342 (535)
.+.+.+++.|+++ ++++|+++..++++.+.|.+. +|+..++.+|.||+|+|...
T Consensus 155 ~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~---~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 155 AYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFG---GAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEEC---TTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEEC---CCceeEEEeCEEEECCCcch
Confidence 4455567789999 999999998763333667663 67555899999999999753
No 171
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=97.95 E-value=1.5e-05 Score=75.70 Aligned_cols=117 Identities=9% Similarity=-0.094 Sum_probs=68.2
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHH---
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIK--- 165 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~--- 165 (535)
++|+|||+|++|+.+|+.+...+.+|+|+|+.....+..+ .+. +.+. .+..+.....
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~-~~~----~~~~---------------~~~~~~~~~~d~~ 63 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPF-LPP----KPPF---------------PPGSLLERAYDPK 63 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCS-SCC----CSCC---------------CTTCHHHHHCCTT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCccc-Ccc----cccc---------------chhhHHhhhccCC
Confidence 4789999999999999999888999999999842211111 010 1100 0000100000
Q ss_pred -HHHHHHHHHHHHHHHhc-CcEEEEeEEEEe--cCCE---EEEce-eEEEcceEEEeeCceecC-CCCC
Q psy14461 166 -RFCIRAKNDSMRELKAL-GIDIVRTAAAFT--NPHT---IKLSN-RSVTGFNFLLAVERRCLP-EPRN 225 (535)
Q Consensus 166 -~~~~~~~~~~~~~~~~~-gV~~~~g~~~~~--~~~~---v~~~~-~~~~~d~lViATGs~p~~-~i~G 225 (535)
.....+...+.+.+++. |++++..++..+ ++.. +.+.+ .++.+|+||+|||..... .++|
T Consensus 64 g~~~~~~~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G 132 (232)
T 2cul_A 64 DERVWAFHARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLG 132 (232)
T ss_dssp CCCHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEET
T ss_pred CCCHHHHHHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhceecC
Confidence 00012223344566675 999886655443 2333 44433 579999999999987655 3344
No 172
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.94 E-value=9.7e-06 Score=85.03 Aligned_cols=101 Identities=10% Similarity=0.056 Sum_probs=71.2
Q ss_pred cEEEECCChHHHHHHHHHHhC--CCcEEEEEc-CcCC--c---------cC----cHHHHHHHHHhhhcCCeEE-cceEE
Q psy14461 243 KTLVLGGSLMAVEIAATLNFL--GVPVTLVYS-RRLL--K---------HF----DQEMVRILLSSLTKAGVSI-QCCVI 303 (535)
Q Consensus 243 ~vvViGgG~~g~e~A~~l~~~--g~~Vtlv~~-~~~l--~---------~~----~~~~~~~~~~~l~~~gV~i-~~~~v 303 (535)
+|+|||||+.|+.+|..|++. |.+|+++++ +.+. + .. ..++.....+.+++.|+++ .+..+
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 81 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQMRHQV 81 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEEESEEE
T ss_pred eEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEEeCCEE
Confidence 699999999999999999998 999999999 5421 0 00 1111112234566789999 99999
Q ss_pred EEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 304 EKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 304 ~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
..++.+ ++. +.+.+..+|+..++.+|.+++|+|.+|....
T Consensus 82 ~~i~~~-~~~--v~v~~~~~g~~~~~~~d~lviAtGs~p~~p~ 121 (452)
T 2cdu_A 82 TNVDPE-TKT--IKVKDLITNEEKTEAYDKLIMTTGSKPTVPP 121 (452)
T ss_dssp EEEEGG-GTE--EEEEETTTCCEEEEECSEEEECCCEEECCCC
T ss_pred EEEEcC-CCE--EEEEecCCCceEEEECCEEEEccCCCcCCCC
Confidence 999764 333 4443212343347999999999999887654
No 173
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.94 E-value=4.6e-05 Score=82.58 Aligned_cols=100 Identities=18% Similarity=0.106 Sum_probs=76.4
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCc------------------------------------------
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLK------------------------------------------ 277 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~------------------------------------------ 277 (535)
..+|+|||||..|+-+|..|++.|.+|+|+++ +....
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 102 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQDQ 102 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCCC
Confidence 36899999999999999999999999999987 32100
Q ss_pred ---------------------cC-cHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEE
Q psy14461 278 ---------------------HF-DQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTV 334 (535)
Q Consensus 278 ---------------------~~-~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~v 334 (535)
.+ ...+...+.+.+++.|+++ .+++|+++..++++.+.|++.+ +|+..++.+|.|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~--~G~~~~i~AdlV 180 (591)
T 3i3l_A 103 APWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRR--GGESVTVESDFV 180 (591)
T ss_dssp CCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEE--TTEEEEEEESEE
T ss_pred ccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEec--CCceEEEEcCEE
Confidence 00 1234556666777889999 9999999986533456677753 675458999999
Q ss_pred EEccCCCC
Q psy14461 335 VNAMEKKF 342 (535)
Q Consensus 335 i~a~G~~p 342 (535)
|.|+|...
T Consensus 181 V~AdG~~S 188 (591)
T 3i3l_A 181 IDAGGSGG 188 (591)
T ss_dssp EECCGGGC
T ss_pred EECCCCcc
Confidence 99999764
No 174
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.92 E-value=4.5e-05 Score=80.29 Aligned_cols=98 Identities=10% Similarity=-0.023 Sum_probs=70.5
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCcc-------------------------------Cc-H-------H
Q psy14461 243 KTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKH-------------------------------FD-Q-------E 282 (535)
Q Consensus 243 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~-------------------------------~~-~-------~ 282 (535)
+|+|||||+.|+.+|..|++.|.+|+++++ +.+... ++ + .
T Consensus 6 DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (466)
T 3l8k_A 6 DVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRKDY 85 (466)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHHHh
Confidence 699999999999999999999999999996 543210 00 0 0
Q ss_pred ---HH--HHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCC
Q psy14461 283 ---MV--RILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAAL 347 (535)
Q Consensus 283 ---~~--~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l 347 (535)
+. ..+.+.+++.||++ .+ ++..++ .+.+.|.. .+|+..++.+|.+++|+|.+|....+
T Consensus 86 ~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id---~~~~~V~~---~~g~~~~~~~d~lviAtG~~p~~p~i 149 (466)
T 3l8k_A 86 VQELRFKQHKRNMSQYETLTFYKG-YVKIKD---PTHVIVKT---DEGKEIEAETRYMIIASGAETAKLRL 149 (466)
T ss_dssp HHHHHHHHHHHHHTTCTTEEEESE-EEEEEE---TTEEEEEE---TTSCEEEEEEEEEEECCCEEECCCCC
T ss_pred heeccccchHHHHHHhCCCEEEEe-EEEEec---CCeEEEEc---CCCcEEEEecCEEEECCCCCccCCCC
Confidence 11 34455667789999 66 666665 34556665 36763339999999999998876543
No 175
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=97.91 E-value=1.9e-05 Score=67.45 Aligned_cols=63 Identities=19% Similarity=0.192 Sum_probs=49.7
Q ss_pred HHHhhhcCCcEEEEeCCCchhhHHHHHHHHHhc---CCcceEEEEEeeCCccHHHHHHHHHhhCCCeE
Q psy14461 50 YISRLSYENRILIFTHAVLREENARAERYLNAR---GDRFAVLYLDRIGDEGILLEEELKRQTNQRRD 114 (535)
Q Consensus 50 ~~~~~i~~~~v~v~~k~~cp~~~~~~k~~~~~~---~~~~~~~~v~iiG~G~aG~~~al~~~~~~~~V 114 (535)
.+..+++.++|++|++++|| ||.++++++.+. +.++.+++|+....|.. +..++...++..+|
T Consensus 6 ~~~~ii~~~~Vvvysk~~Cp-~C~~ak~lL~~~~~~~v~~~~idid~~~d~~~-~~~~l~~~~G~~tV 71 (127)
T 3l4n_A 6 EYSLILDLSPIIIFSKSTCS-YSKGMKELLENEYQFIPNYYIIELDKHGHGEE-LQEYIKLVTGRGTV 71 (127)
T ss_dssp HHHHHHTSCSEEEEECTTCH-HHHHHHHHHHHHEEEESCCEEEEGGGSTTHHH-HHHHHHHHHSCCSS
T ss_pred HHHHHHccCCEEEEEcCCCc-cHHHHHHHHHHhcccCCCcEEEEecCCCCHHH-HHHHHHHHcCCCCc
Confidence 44678999999999999999 999999999874 67777778777666444 78888776655443
No 176
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.91 E-value=4.6e-05 Score=78.65 Aligned_cols=101 Identities=20% Similarity=0.187 Sum_probs=73.2
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCc-EEEEEc-CcCCcc-----Cc----------------------------------
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVP-VTLVYS-RRLLKH-----FD---------------------------------- 280 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~-Vtlv~~-~~~l~~-----~~---------------------------------- 280 (535)
.+|+|||||++|+.+|..|++.|.+ |+|+++ +.+.+. +.
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g~ 84 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSGA 84 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCCC
Confidence 4799999999999999999999999 999998 543110 00
Q ss_pred ----------------------HHHHHHHHHhhhc-CC-eEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEE
Q psy14461 281 ----------------------QEMVRILLSSLTK-AG-VSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVV 335 (535)
Q Consensus 281 ----------------------~~~~~~~~~~l~~-~g-V~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi 335 (535)
.++.+.+.+.+.+ .| +++ .++++++++. + +.+.|++.+..+|++.++.+|+||
T Consensus 85 ~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~-~~v~v~~~~~~~g~~~~~~ad~vV 162 (410)
T 3c96_A 85 TVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-R-DGRVLIGARDGHGKPQALGADVLV 162 (410)
T ss_dssp EEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-E-TTEEEEEEEETTSCEEEEEESEEE
T ss_pred EEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-C-CccEEEEecCCCCCceEEecCEEE
Confidence 1333445555554 25 589 9999999987 3 457777753223754579999999
Q ss_pred EccCCCCCC
Q psy14461 336 NAMEKKFDF 344 (535)
Q Consensus 336 ~a~G~~p~~ 344 (535)
.|.|.....
T Consensus 163 ~AdG~~S~v 171 (410)
T 3c96_A 163 GADGIHSAV 171 (410)
T ss_dssp ECCCTTCHH
T ss_pred ECCCccchh
Confidence 999987654
No 177
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.90 E-value=4.9e-05 Score=82.06 Aligned_cols=101 Identities=16% Similarity=0.038 Sum_probs=74.4
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCcc---------------------------------------C--
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKH---------------------------------------F-- 279 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~---------------------------------------~-- 279 (535)
-+|+|||+|..|+.+|..|++.|.+|+|+++ +.+... .
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~~~ 201 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQNDI 201 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCH
Confidence 3799999999999999999999999999998 532110 0
Q ss_pred -----------------------------------------------cHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCC
Q psy14461 280 -----------------------------------------------DQEMVRILLSSLTKAGVSI-QCCVIEKVISSFD 311 (535)
Q Consensus 280 -----------------------------------------------~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~ 311 (535)
...+...+.+.+++.||++ +++.++++..+++
T Consensus 202 ~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~ 281 (566)
T 1qo8_A 202 KLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDD 281 (566)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTT
T ss_pred HHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCC
Confidence 1123345556667789999 9999999987621
Q ss_pred CcEE-EEEecCCCCCceEEEcCEEEEccCCCCC
Q psy14461 312 GMKG-VRGFHPESKEPFADVFKTVVNAMEKKFD 343 (535)
Q Consensus 312 ~~~~-v~~~~~~~G~~~~~~~D~vi~a~G~~p~ 343 (535)
+++. |++.. .+|+..++.+|.||+|+|....
T Consensus 282 g~v~Gv~~~~-~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 282 HSVVGAVVHG-KHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp SBEEEEEEEE-TTTEEEEEEEEEEEECCCCCTT
T ss_pred CcEEEEEEEe-CCCcEEEEEcCEEEEecCCccc
Confidence 5543 55542 3676557899999999997554
No 178
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.88 E-value=7.2e-05 Score=77.05 Aligned_cols=96 Identities=13% Similarity=0.081 Sum_probs=72.4
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCcc-----C-----------------------------------
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKH-----F----------------------------------- 279 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~-----~----------------------------------- 279 (535)
.-+|+|||||++|+-+|..|++.|.+|+|+++ +.+.+. +
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~g 102 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRSG 102 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCCC
Confidence 35899999999999999999999999999998 532100 0
Q ss_pred -----------------------cHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEE
Q psy14461 280 -----------------------DQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVV 335 (535)
Q Consensus 280 -----------------------~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi 335 (535)
...+.+.+.+.+.+ +++ .+++|++++.+ ++.+.|++. +|+ ++.+|+||
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~-~~~v~v~~~---~g~--~~~a~~vV 174 (407)
T 3rp8_A 103 ENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEED-ADGVTVWFT---DGS--SASGDLLI 174 (407)
T ss_dssp CEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEE-TTEEEEEET---TSC--EEEESEEE
T ss_pred CEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEec-CCcEEEEEc---CCC--EEeeCEEE
Confidence 01233344444444 788 99999999887 566777773 777 89999999
Q ss_pred EccCCCCCC
Q psy14461 336 NAMEKKFDF 344 (535)
Q Consensus 336 ~a~G~~p~~ 344 (535)
.|.|.....
T Consensus 175 ~AdG~~S~v 183 (407)
T 3rp8_A 175 AADGSHSAL 183 (407)
T ss_dssp ECCCTTCSS
T ss_pred ECCCcChHH
Confidence 999987654
No 179
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.88 E-value=7.2e-05 Score=76.64 Aligned_cols=95 Identities=13% Similarity=-0.013 Sum_probs=67.8
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCcc-------CcHHHH------------------------------
Q psy14461 243 KTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKH-------FDQEMV------------------------------ 284 (535)
Q Consensus 243 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~-------~~~~~~------------------------------ 284 (535)
+|+|||||+.|+-+|..|++.|.+|+|+++ +.+... +.+...
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~~ 82 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFYN 82 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEec
Confidence 699999999999999999999999999998 543210 111100
Q ss_pred -----------------------------HHHHHhhh-cCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCE
Q psy14461 285 -----------------------------RILLSSLT-KAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKT 333 (535)
Q Consensus 285 -----------------------------~~~~~~l~-~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~ 333 (535)
..+.+.|. ..+..+ ++.++++++..+++.++|++. ||+ ++++|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v~v~~~---dG~--~~~adl 157 (412)
T 4hb9_A 83 ERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANTIQWNKTFVRYEHIENGGIKIFFA---DGS--HENVDV 157 (412)
T ss_dssp TTSCEEEC--------------CEEEEEHHHHHHHHHTTCTTTEECSCCEEEEEECTTSCEEEEET---TSC--EEEESE
T ss_pred CCcceecccCCccccccccccccceEeeHHHHHHHHHhhccceEEEEEEEEeeeEcCCCeEEEEEC---CCC--EEEeeE
Confidence 01122221 123357 788899998765667888884 788 899999
Q ss_pred EEEccCCCC
Q psy14461 334 VVNAMEKKF 342 (535)
Q Consensus 334 vi~a~G~~p 342 (535)
||-|-|...
T Consensus 158 vVgADG~~S 166 (412)
T 4hb9_A 158 LVGADGSNS 166 (412)
T ss_dssp EEECCCTTC
T ss_pred EEECCCCCc
Confidence 999999764
No 180
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.86 E-value=2.4e-05 Score=83.06 Aligned_cols=100 Identities=17% Similarity=0.071 Sum_probs=73.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCc-------------cCcHHHHHHHHHhhhcCCeEE-cceEEEEE
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLK-------------HFDQEMVRILLSSLTKAGVSI-QCCVIEKV 306 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~-------------~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i 306 (535)
.+|+|||||+.|+.+|..|++. .+|+++++ +.+.. ....++...+.+.+ +.|+++ .+..+.++
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v~~i 186 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSALGV 186 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEECCC
T ss_pred CCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEEEEE
Confidence 5799999999999999999999 99999998 65411 11234445555555 679999 99999988
Q ss_pred EEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 307 ISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 307 ~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
... +..+.+... .+++..++.+|.+++|+|..|....
T Consensus 187 ~~~-~~~~~~~~~--~~~~~~~~~~d~lvlAtGa~~~~~~ 223 (493)
T 1y56_A 187 FDK-GEYFLVPVV--RGDKLIEILAKRVVLATGAIDSTML 223 (493)
T ss_dssp EEC-SSSEEEEEE--ETTEEEEEEESCEEECCCEEECCCC
T ss_pred EcC-CcEEEEEEe--cCCeEEEEECCEEEECCCCCccCCC
Confidence 875 344444332 1454457899999999999887543
No 181
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.86 E-value=6.3e-05 Score=77.31 Aligned_cols=97 Identities=15% Similarity=0.121 Sum_probs=70.0
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCcc-------C-c---H---------------------------
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKH-------F-D---Q--------------------------- 281 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~-------~-~---~--------------------------- 281 (535)
..+|+|||||++|+.+|..|++.|.+|+|+++ +.+... + . .
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 105 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADEK 105 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECCC
Confidence 35899999999999999999999999999998 543210 0 0 0
Q ss_pred -----------------------HHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEc
Q psy14461 282 -----------------------EMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNA 337 (535)
Q Consensus 282 -----------------------~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a 337 (535)
.+.+.+.+.+. ++++ .++++++++.+ ++.+.|++. +|+ ++.+|.||.|
T Consensus 106 g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~-~~~v~v~~~---~g~--~~~ad~vV~A 177 (398)
T 2xdo_A 106 GNILSTKNVKPENRFDNPEINRNDLRAILLNSLE--NDTVIWDRKLVMLEPG-KKKWTLTFE---NKP--SETADLVILA 177 (398)
T ss_dssp SEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSC--TTSEEESCCEEEEEEC-SSSEEEEET---TSC--CEEESEEEEC
T ss_pred CCchhhccccccCCCCCceECHHHHHHHHHhhcC--CCEEEECCEEEEEEEC-CCEEEEEEC---CCc--EEecCEEEEC
Confidence 11112222221 2568 89999999876 456777773 676 6899999999
Q ss_pred cCCCCCCC
Q psy14461 338 MEKKFDFA 345 (535)
Q Consensus 338 ~G~~p~~~ 345 (535)
.|......
T Consensus 178 dG~~S~vR 185 (398)
T 2xdo_A 178 NGGMSKVR 185 (398)
T ss_dssp SCTTCSCC
T ss_pred CCcchhHH
Confidence 99887654
No 182
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.86 E-value=0.00011 Score=79.55 Aligned_cols=102 Identities=16% Similarity=0.110 Sum_probs=74.5
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCcc---------------------------------------C-
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKH---------------------------------------F- 279 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~---------------------------------------~- 279 (535)
..+|+|||+|..|+.+|..|++.|.+|+++++ +.+... .
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIND 205 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 35799999999999999999999999999987 533100 0
Q ss_pred ------------------------------------------------cHHHHHHHHHhhhcCCeEE-cceEEEEEEEeC
Q psy14461 280 ------------------------------------------------DQEMVRILLSSLTKAGVSI-QCCVIEKVISSF 310 (535)
Q Consensus 280 ------------------------------------------------~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~ 310 (535)
...+...+.+.+++.||++ +++.++++..++
T Consensus 206 ~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~ 285 (572)
T 1d4d_A 206 PELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILEDA 285 (572)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC-
T ss_pred HHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEEEEECC
Confidence 1123344556667789999 999999997652
Q ss_pred CCcE-EEEEecCCCCCceEEEcCEEEEccCCCCC
Q psy14461 311 DGMK-GVRGFHPESKEPFADVFKTVVNAMEKKFD 343 (535)
Q Consensus 311 ~~~~-~v~~~~~~~G~~~~~~~D~vi~a~G~~p~ 343 (535)
++++ .|.+.+ .+|+..++.+|.||+|+|..++
T Consensus 286 ~g~v~GV~~~~-~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 286 SGKVTGVLVKG-EYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp -CCEEEEEEEE-TTTEEEEEECSEEEECCCCCTT
T ss_pred CCeEEEEEEEe-CCCcEEEEEcCEEEEeCCCCcc
Confidence 1544 355542 3676567999999999997664
No 183
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.85 E-value=7.7e-05 Score=80.76 Aligned_cols=107 Identities=16% Similarity=0.110 Sum_probs=71.5
Q ss_pred hhhHHhccCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-Cc-CC-----cc-------------------------
Q psy14461 231 ADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RR-LL-----KH------------------------- 278 (535)
Q Consensus 231 ~~~~~~~~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~-~l-----~~------------------------- 278 (535)
+..+.......-+|+|||||..|+++|..+++.|.+|+++++ .. +. +.
T Consensus 11 ~~~~~~~~~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d 90 (641)
T 3cp8_A 11 SSGLVPRGSHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAID 90 (641)
T ss_dssp ---------CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHH
T ss_pred cCCccccccCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHH
Confidence 333333333335799999999999999999999999999997 41 11 00
Q ss_pred -----------------------Cc-HHHHHHHHHhhhc-CCeEEcceEEEEEEEeCCCcEE-EEEecCCCCCceEEEcC
Q psy14461 279 -----------------------FD-QEMVRILLSSLTK-AGVSIQCCVIEKVISSFDGMKG-VRGFHPESKEPFADVFK 332 (535)
Q Consensus 279 -----------------------~~-~~~~~~~~~~l~~-~gV~i~~~~v~~i~~~~~~~~~-v~~~~~~~G~~~~~~~D 332 (535)
.+ ..+...+.+.+++ .|+++.+..++.+..+ ++.+. |.+ .+|+ ++.+|
T Consensus 91 ~~gi~f~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d-~g~V~GV~t---~~G~--~i~Ad 164 (641)
T 3cp8_A 91 ATGIQFRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSAN-SGKFSSVTV---RSGR--AIQAK 164 (641)
T ss_dssp HHEEEEEEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEE-TTEEEEEEE---TTSC--EEEEE
T ss_pred hcCCchhhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEec-CCEEEEEEE---CCCc--EEEeC
Confidence 01 1344556666766 4999933478888765 45554 665 3676 89999
Q ss_pred EEEEccCCCCC
Q psy14461 333 TVVNAMEKKFD 343 (535)
Q Consensus 333 ~vi~a~G~~p~ 343 (535)
.||+|+|..++
T Consensus 165 ~VVLATG~~s~ 175 (641)
T 3cp8_A 165 AAILACGTFLN 175 (641)
T ss_dssp EEEECCTTCBT
T ss_pred EEEECcCCCCC
Confidence 99999998755
No 184
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.85 E-value=9e-05 Score=77.92 Aligned_cols=99 Identities=17% Similarity=0.109 Sum_probs=68.4
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEEcCcC---------------------------Ccc----------Cc-HH
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYSRRL---------------------------LKH----------FD-QE 282 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~---------------------------l~~----------~~-~~ 282 (535)
..+|+|||||+.|+.+|..|++.|.+|+++++..+ .+. .+ ..
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 83 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDRSK 83 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSTTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCCHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccCHHH
Confidence 35799999999999999999999999999998321 111 11 11
Q ss_pred HH-------HHH-----HHhhhcC-CeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 283 MV-------RIL-----LSSLTKA-GVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 283 ~~-------~~~-----~~~l~~~-gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
+. +.+ .+.+++. ||++ .+ ++..++ .+.+.|.+ .+|+..++++|.+++|+|.+|....
T Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~~~~~~---~~~~~v~~---~~g~~~~~~~d~lviAtGs~p~~p~ 154 (467)
T 1zk7_A 84 LLAQQQARVDELRHAKYEGILGGNPAITVVHG-EARFKD---DQSLTVRL---NEGGERVVMFDRCLVATGASPAVPP 154 (467)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEE-EEEEEE---TTEEEEEE---TTSSEEEEECSEEEECCCEEECCCC
T ss_pred HHHHHHHHHHHHhhhhHHHHHhccCCeEEEEE-EEEEcc---CCEEEEEe---CCCceEEEEeCEEEEeCCCCCCCCC
Confidence 11 111 2345566 9999 66 455554 34556665 3674448999999999999887654
No 185
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=97.85 E-value=3.4e-05 Score=64.27 Aligned_cols=64 Identities=11% Similarity=0.093 Sum_probs=50.6
Q ss_pred ChhHHHHhhhcCCcEEEEeC-----CCchhhHHHHHHHHHhcCCcceEEEEEeeCCccHHHHHHHHHhhCCCeE
Q psy14461 46 TPPAYISRLSYENRILIFTH-----AVLREENARAERYLNARGDRFAVLYLDRIGDEGILLEEELKRQTNQRRD 114 (535)
Q Consensus 46 ~l~~~~~~~i~~~~v~v~~k-----~~cp~~~~~~k~~~~~~~~~~~~~~v~iiG~G~aG~~~al~~~~~~~~V 114 (535)
++..++..++++++|++|+| ++|| +|.++++++.+.+.++..++|. .. +. +..++....+..+|
T Consensus 4 ~~~~~v~~~i~~~~Vvlf~kg~~~~~~Cp-~C~~ak~~L~~~gi~y~~~di~--~d-~~-~~~~l~~~~g~~tv 72 (111)
T 3zyw_A 4 DLNLRLKKLTHAAPCMLFMKGTPQEPRCG-FSKQMVEILHKHNIQFSSFDIF--SD-EE-VRQGLKAYSSWPTY 72 (111)
T ss_dssp CHHHHHHHHHTSSSEEEEESBCSSSBSSH-HHHHHHHHHHHTTCCCEEEEGG--GC-HH-HHHHHHHHHTCCSS
T ss_pred HHHHHHHHHHhcCCEEEEEecCCCCCcch-hHHHHHHHHHHcCCCeEEEECc--CC-HH-HHHHHHHHHCCCCC
Confidence 57889999999999999999 9999 9999999999999887655543 22 44 67777666554443
No 186
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.84 E-value=1.8e-05 Score=84.10 Aligned_cols=105 Identities=11% Similarity=0.190 Sum_probs=69.1
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCC--ccC--------c-HHHHHHHHHhh--hcCCeEEcceEEEEEE
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLL--KHF--------D-QEMVRILLSSL--TKAGVSIQCCVIEKVI 307 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l--~~~--------~-~~~~~~~~~~l--~~~gV~i~~~~v~~i~ 307 (535)
++|||||||+.|+.+|..|++.+.+||||++ +... |.+ + .++...+.+.+ ++.++++...++++|+
T Consensus 43 prVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~~~v~~ID 122 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEAEATSIN 122 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEEEEEEEEE
T ss_pred CCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEEEEEEEEE
Confidence 4899999999999999999999999999998 5431 211 1 11111122222 3457888555788888
Q ss_pred EeCCCcEEEEEec-------------CCCCCceEEEcCEEEEccCCCCCCCCC
Q psy14461 308 SSFDGMKGVRGFH-------------PESKEPFADVFKTVVNAMEKKFDFAAL 347 (535)
Q Consensus 308 ~~~~~~~~v~~~~-------------~~~G~~~~~~~D~vi~a~G~~p~~~~l 347 (535)
.+ ...+.+.... ...++..++++|.+++|+|.+|+...+
T Consensus 123 ~~-~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~i 174 (502)
T 4g6h_A 123 PD-RNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGI 174 (502)
T ss_dssp GG-GTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTTC
T ss_pred hh-hCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCCc
Confidence 65 3333332210 011233489999999999999987543
No 187
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.84 E-value=1.4e-05 Score=84.53 Aligned_cols=102 Identities=11% Similarity=0.123 Sum_probs=70.2
Q ss_pred CcEEEECCChHHHHHHHHHHhC--CCcEEEEEc-CcCC--c-cCc----------HHHHHHHHHhh-hcCCeEE-cceEE
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFL--GVPVTLVYS-RRLL--K-HFD----------QEMVRILLSSL-TKAGVSI-QCCVI 303 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~--g~~Vtlv~~-~~~l--~-~~~----------~~~~~~~~~~l-~~~gV~i-~~~~v 303 (535)
.+|+|||+|+.|+.+|..|++. |.+|+++++ +.+. + .++ .++.....+.+ ++.|+++ .+..+
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~v 116 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHEV 116 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCEE
Confidence 5799999999999999999986 899999998 5431 1 010 11111112334 3459999 99999
Q ss_pred EEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 304 EKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 304 ~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
..++.+ ++.+.+.. ..+|+..++.+|.+++|+|.+|....
T Consensus 117 ~~i~~~-~~~v~v~~--~~~g~~~~~~~d~lviAtG~~p~~p~ 156 (480)
T 3cgb_A 117 TKVDTE-KKIVYAEH--TKTKDVFEFSYDRLLIATGVRPVMPE 156 (480)
T ss_dssp EEEETT-TTEEEEEE--TTTCCEEEEECSEEEECCCEEECCCC
T ss_pred EEEECC-CCEEEEEE--cCCCceEEEEcCEEEECCCCcccCCC
Confidence 999764 33343332 12465457999999999999887643
No 188
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.82 E-value=9.1e-05 Score=79.49 Aligned_cols=98 Identities=14% Similarity=0.085 Sum_probs=72.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCC--------c-------------cC----------------cHHH
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLL--------K-------------HF----------------DQEM 283 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l--------~-------------~~----------------~~~~ 283 (535)
.+|+|||+|+.|+.+|..|++.|.+|+++++ +.+. | .+ .+++
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~i 96 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEI 96 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHHH
Confidence 3799999999999999999999999999998 5421 1 00 1345
Q ss_pred HHHHHHhhhcCC--eEE-cceEEEEEEEeCC-CcEEEEEecCCCCCceEEEcCEEEEccCC--CCCC
Q psy14461 284 VRILLSSLTKAG--VSI-QCCVIEKVISSFD-GMKGVRGFHPESKEPFADVFKTVVNAMEK--KFDF 344 (535)
Q Consensus 284 ~~~~~~~l~~~g--V~i-~~~~v~~i~~~~~-~~~~v~~~~~~~G~~~~~~~D~vi~a~G~--~p~~ 344 (535)
.+++....++.+ +++ .+++|++++.+++ +...|++ .+|+ ++.+|.||+|+|. .|..
T Consensus 97 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~---~~G~--~~~ad~vV~AtG~~s~p~~ 158 (542)
T 1w4x_A 97 LRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDT---NHGD--RIRARYLIMASGQLSVPQL 158 (542)
T ss_dssp HHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEE---TTCC--EEEEEEEEECCCSCCCCCC
T ss_pred HHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEE---CCCC--EEEeCEEEECcCCCCCCCC
Confidence 555555555555 567 8899999987532 3466776 3676 7999999999995 4544
No 189
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.81 E-value=0.00017 Score=76.50 Aligned_cols=98 Identities=13% Similarity=0.050 Sum_probs=74.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCcc------------------------------------------
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKH------------------------------------------ 278 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~------------------------------------------ 278 (535)
.+|+|||||++|+-+|..|++.|.+|+|+++ +.+...
T Consensus 12 ~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 91 (500)
T 2qa1_A 12 AAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPIDFG 91 (500)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEEEGG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceecccc
Confidence 5799999999999999999999999999997 432100
Q ss_pred -C-----------cHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCC
Q psy14461 279 -F-----------DQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKF 342 (535)
Q Consensus 279 -~-----------~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p 342 (535)
. ...+.+.+.+.+++.|+++ .++++++++.+ ++.++|++.+ .+| +.++.+|+||.|.|...
T Consensus 92 ~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~-~~~v~v~~~~-~~g-~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 92 VLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDD-GAGVTVEVRG-PEG-KHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp GSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEE-TTEEEEEEEE-TTE-EEEEEESEEEECCCTTC
T ss_pred cCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEc-CCeEEEEEEc-CCC-CEEEEeCEEEECCCcch
Confidence 0 0234455666677789999 99999999887 4667787763 233 34799999999999653
No 190
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.81 E-value=5.4e-05 Score=79.68 Aligned_cols=98 Identities=14% Similarity=-0.021 Sum_probs=68.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCcc--------------------------------------Cc-H
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKH--------------------------------------FD-Q 281 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~--------------------------------------~~-~ 281 (535)
.+|+|||||+.|+.+|..|++.|.+|+++++ +.+... .+ +
T Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 82 (468)
T 2qae_A 3 YDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDSA 82 (468)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCHH
Confidence 3699999999999999999999999999999 543100 00 0
Q ss_pred H-----------HHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 282 E-----------MVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 282 ~-----------~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
. +...+.+.+++.||++ .+..+ .++ .+.+.|.. .+|+..++.+|.+++|+|.+|....
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~-~i~---~~~~~v~~---~~G~~~~~~~d~lviAtG~~p~~p~ 152 (468)
T 2qae_A 83 KMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGS-FET---AHSIRVNG---LDGKQEMLETKKTIIATGSEPTELP 152 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEE-EEE---TTEEEEEE---TTSCEEEEEEEEEEECCCEEECCBT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-Eee---CCEEEEEe---cCCceEEEEcCEEEECCCCCcCCCC
Confidence 1 1112244566678999 77644 343 34556655 3664347999999999999887543
No 191
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.81 E-value=0.00017 Score=76.54 Aligned_cols=99 Identities=13% Similarity=0.099 Sum_probs=75.3
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCcc-----------------------------------------
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKH----------------------------------------- 278 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~----------------------------------------- 278 (535)
..+|+|||||++|+-+|..|++.|.+|+|+++ +.+...
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 91 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVDF 91 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEEG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceeccc
Confidence 35799999999999999999999999999997 432100
Q ss_pred ------C-------cHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCC
Q psy14461 279 ------F-------DQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKF 342 (535)
Q Consensus 279 ------~-------~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p 342 (535)
. ...+.+.+.+.+++.|+++ .++++++++.+ ++.++|++.+ .+| +.++.+|+||.|.|...
T Consensus 92 ~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~-~~~v~v~~~~-~~g-~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 92 GVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDE-GDHVVVEVEG-PDG-PRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp GGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEEC-SSCEEEEEEC-SSC-EEEEEEEEEEECCCTTC
T ss_pred ccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEe-CCEEEEEEEc-CCC-cEEEEeCEEEEccCccc
Confidence 0 0234455666677789999 99999999876 4567788763 233 35799999999999653
No 192
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.81 E-value=1.2e-05 Score=85.18 Aligned_cols=100 Identities=8% Similarity=0.068 Sum_probs=70.9
Q ss_pred CcEEEECCChHHHHHHHHHHhCC---CcEEEEEc-CcCC--cc-C----------cHHHHHHHHHhhhcCCeEE-cceEE
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLG---VPVTLVYS-RRLL--KH-F----------DQEMVRILLSSLTKAGVSI-QCCVI 303 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g---~~Vtlv~~-~~~l--~~-~----------~~~~~~~~~~~l~~~gV~i-~~~~v 303 (535)
.+|+|||+|+.|+.+|..|++.| .+|+++++ +.+. +. + .+++.....+.+++.||++ .+.++
T Consensus 36 ~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~v 115 (490)
T 2bc0_A 36 SKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKVYMESPV 115 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEETTCCE
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCCCEEEeCCEE
Confidence 68999999999999999999988 99999998 5421 10 0 1111111234566789999 99999
Q ss_pred EEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 304 EKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 304 ~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
..++.+ ++. +++.. +|+..++.+|.+++|+|.+|....
T Consensus 116 ~~i~~~-~~~--v~v~~--~g~~~~~~~d~lviAtG~~p~~p~ 153 (490)
T 2bc0_A 116 QSIDYD-AKT--VTALV--DGKNHVETYDKLIFATGSQPILPP 153 (490)
T ss_dssp EEEETT-TTE--EEEEE--TTEEEEEECSEEEECCCEEECCCS
T ss_pred EEEECC-CCE--EEEEe--CCcEEEEECCEEEECCCCCcCCCC
Confidence 999754 333 44421 333347999999999999887653
No 193
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.81 E-value=8.7e-05 Score=80.39 Aligned_cols=97 Identities=18% Similarity=0.110 Sum_probs=71.5
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-Cc-CC-----c------------------c------------------
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RR-LL-----K------------------H------------------ 278 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~-~l-----~------------------~------------------ 278 (535)
-+|+|||||..|+++|..+++.|.+|+|+++ .. +. + .
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~~ 108 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNA 108 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhhc
Confidence 3799999999999999999999999999997 31 10 0 0
Q ss_pred ------------Cc-HHHHHHHHHhhhc-CCeEEcceEEEEEEEeCCCcE-EEEEecCCCCCceEEEcCEEEEccCCCCC
Q psy14461 279 ------------FD-QEMVRILLSSLTK-AGVSIQCCVIEKVISSFDGMK-GVRGFHPESKEPFADVFKTVVNAMEKKFD 343 (535)
Q Consensus 279 ------------~~-~~~~~~~~~~l~~-~gV~i~~~~v~~i~~~~~~~~-~v~~~~~~~G~~~~~~~D~vi~a~G~~p~ 343 (535)
.+ ..+...+.+.+++ .|+++.+..++.+..+ ++.+ .|.+ .+|. ++.+|.||+|+|..++
T Consensus 109 ~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e-~g~V~GV~t---~dG~--~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 109 SKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVE-NDRVVGAVT---QMGL--KFRAKAVVLTVGTFLD 182 (651)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEES-SSBEEEEEE---TTSE--EEEEEEEEECCSTTTC
T ss_pred ccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEec-CCEEEEEEE---CCCC--EEECCEEEEcCCCCcc
Confidence 01 1345556667777 6999944688888765 4544 4665 3675 7999999999998764
Q ss_pred C
Q psy14461 344 F 344 (535)
Q Consensus 344 ~ 344 (535)
.
T Consensus 183 ~ 183 (651)
T 3ces_A 183 G 183 (651)
T ss_dssp C
T ss_pred C
Confidence 3
No 194
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.80 E-value=0.00011 Score=78.58 Aligned_cols=98 Identities=22% Similarity=0.148 Sum_probs=74.7
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCc-------------------------------------------
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLK------------------------------------------- 277 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~------------------------------------------- 277 (535)
.+|+|||||++|+-+|..|++.|.+|+|+++ +.+..
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLAE 85 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEES
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEEe
Confidence 4799999999999999999999999999998 42200
Q ss_pred ------------cC-------------------cHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCC----cEEEEEecC
Q psy14461 278 ------------HF-------------------DQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDG----MKGVRGFHP 321 (535)
Q Consensus 278 ------------~~-------------------~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~----~~~v~~~~~ 321 (535)
.+ ...+...+.+.+++.|+++ .++++++++.+ ++ .+++++.+
T Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~-~~~~~~~v~v~~~~- 163 (535)
T 3ihg_A 86 SVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQH-DDDAGAGVTARLAG- 163 (535)
T ss_dssp SSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEE-CGGGCSEEEEEEEE-
T ss_pred ccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEC-CCCccccEEEEEEc-
Confidence 00 1234455666777789999 99999999887 45 67777753
Q ss_pred CCCCceEEEcCEEEEccCCCC
Q psy14461 322 ESKEPFADVFKTVVNAMEKKF 342 (535)
Q Consensus 322 ~~G~~~~~~~D~vi~a~G~~p 342 (535)
.+| +.++.+|+||.|.|...
T Consensus 164 ~~~-~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 164 PDG-EYDLRAGYLVGADGNRS 183 (535)
T ss_dssp TTE-EEEEEEEEEEECCCTTC
T ss_pred CCC-eEEEEeCEEEECCCCcc
Confidence 122 34899999999999753
No 195
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.79 E-value=0.00016 Score=78.10 Aligned_cols=97 Identities=15% Similarity=0.135 Sum_probs=71.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-C-cCC-----cc--------C---------------------------
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-R-RLL-----KH--------F--------------------------- 279 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~-~~l-----~~--------~--------------------------- 279 (535)
-+|+|||||..|+++|..+++.|.+|.|+++ . .+. +. +
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~~ 107 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLNT 107 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeeccc
Confidence 4799999999999999999999999999997 3 111 00 0
Q ss_pred -------------c-HHHHHHHHHhhhc-CCeEEcceEEEEEEEeCCCcE-EEEEecCCCCCceEEEcCEEEEccCCCCC
Q psy14461 280 -------------D-QEMVRILLSSLTK-AGVSIQCCVIEKVISSFDGMK-GVRGFHPESKEPFADVFKTVVNAMEKKFD 343 (535)
Q Consensus 280 -------------~-~~~~~~~~~~l~~-~gV~i~~~~v~~i~~~~~~~~-~v~~~~~~~G~~~~~~~D~vi~a~G~~p~ 343 (535)
+ ..+...+.+.+++ .|+++.+..|+++..+ ++.+ .|.+ .+|+ ++.+|.||+|+|..++
T Consensus 108 ~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e-~g~V~GV~t---~dG~--~i~AdaVVLATG~~s~ 181 (637)
T 2zxi_A 108 RKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVK-NNQVVGVRT---NLGV--EYKTKAVVVTTGTFLN 181 (637)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEES-SSBEEEEEE---TTSC--EEECSEEEECCTTCBT
T ss_pred ccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEec-CCEEEEEEE---CCCc--EEEeCEEEEccCCCcc
Confidence 0 1244556666766 5999944688888765 4554 3665 3676 7999999999998765
Q ss_pred C
Q psy14461 344 F 344 (535)
Q Consensus 344 ~ 344 (535)
.
T Consensus 182 ~ 182 (637)
T 2zxi_A 182 G 182 (637)
T ss_dssp C
T ss_pred C
Confidence 4
No 196
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.76 E-value=6.9e-05 Score=76.25 Aligned_cols=53 Identities=13% Similarity=-0.001 Sum_probs=40.2
Q ss_pred HHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCC
Q psy14461 283 MVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKF 342 (535)
Q Consensus 283 ~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p 342 (535)
+.+.+.+.+++.|+++ .+++|++++.+ ++.+.|++ .+| ++.+|.||+|+|...
T Consensus 166 ~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~~v~~---~~g---~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 166 VCKAYVKAAKMLGAEIFEHTPVLHVERD-GEALFIKT---PSG---DVWANHVVVASGVWS 219 (382)
T ss_dssp HHHHHHHHHHHTTCEEETTCCCCEEECS-SSSEEEEE---TTE---EEEEEEEEECCGGGT
T ss_pred HHHHHHHHHHHCCCEEEcCCcEEEEEEE-CCEEEEEc---CCc---eEEcCEEEECCChhH
Confidence 4455666777889999 99999999875 45565655 244 689999999999854
No 197
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.76 E-value=7.7e-05 Score=80.53 Aligned_cols=97 Identities=14% Similarity=0.133 Sum_probs=74.2
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCC-------------------------------------c-----c
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLL-------------------------------------K-----H 278 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l-------------------------------------~-----~ 278 (535)
-+|+|||||++|+-+|..|++.|.+|+|+++ +.+. . .
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 129 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQG 129 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTTC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccccc
Confidence 4799999999999999999999999999997 4211 0 0
Q ss_pred C----------------cHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCC
Q psy14461 279 F----------------DQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKK 341 (535)
Q Consensus 279 ~----------------~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~ 341 (535)
+ ...+.+.+.+.+++.|+++ .+++|++++.+ ++.+.|++.. .+|+ .++.+|+||.|.|..
T Consensus 130 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~-~~~v~v~~~~-~~G~-~~~~a~~vV~ADG~~ 206 (570)
T 3fmw_A 130 LDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQD-AEAVEVTVAG-PSGP-YPVRARYGVGCDGGR 206 (570)
T ss_dssp CBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBC-SSCEEEEEEE-TTEE-EEEEESEEEECSCSS
T ss_pred ccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCeEEEEEEe-CCCc-EEEEeCEEEEcCCCC
Confidence 0 1345566667777779999 99999999876 4567777742 2562 379999999999964
No 198
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.75 E-value=5.5e-05 Score=79.63 Aligned_cols=98 Identities=16% Similarity=0.054 Sum_probs=68.4
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCcc-------------------------------------Cc-HH
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKH-------------------------------------FD-QE 282 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~-------------------------------------~~-~~ 282 (535)
.+|+|||||+.|+.+|..|++.|.+|+++++ +.+... .+ +.
T Consensus 7 ~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 86 (470)
T 1dxl_A 7 NDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDLAA 86 (470)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCHHH
Confidence 5799999999999999999999999999999 544110 00 00
Q ss_pred -----------HHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 283 -----------MVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 283 -----------~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
+...+.+.+++.||++ .+..+. ++ .+.+.|.+ .+|+..++.+|.+|+|+|.+|....
T Consensus 87 ~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~---~~~~~v~~---~~G~~~~i~~d~lIiAtGs~p~~p~ 155 (470)
T 1dxl_A 87 MMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF-VS---PSEISVDT---IEGENTVVKGKHIIIATGSDVKSLP 155 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE-EE---TTEEEECC---SSSCCEEEECSEEEECCCEEECCBT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-ec---CCEEEEEe---CCCceEEEEcCEEEECCCCCCCCCC
Confidence 1112344556679999 887653 32 34455544 3563347999999999999887643
No 199
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=97.75 E-value=0.00027 Score=69.05 Aligned_cols=37 Identities=11% Similarity=0.024 Sum_probs=32.8
Q ss_pred EEEEEeeCCccHHHHHHHHHhhC-CCeEEEEecCCccc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTN-QRRDELQERGSHLS 124 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~-~~~V~lie~~~~~~ 124 (535)
.++|+|||+|++|+.+|+.+... +.+|+|+|+.+.++
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~g 76 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPG 76 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCC
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCC
Confidence 47899999999999999988886 89999999988653
No 200
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=97.75 E-value=6.4e-05 Score=63.62 Aligned_cols=65 Identities=12% Similarity=0.038 Sum_probs=49.2
Q ss_pred hhHHHHhhhcCCcEEEEeCC-----CchhhHHHHHHHHHhcCCcce-EEEEEeeCCccHHHHHHHHHhhCCCeE
Q psy14461 47 PPAYISRLSYENRILIFTHA-----VLREENARAERYLNARGDRFA-VLYLDRIGDEGILLEEELKRQTNQRRD 114 (535)
Q Consensus 47 l~~~~~~~i~~~~v~v~~k~-----~cp~~~~~~k~~~~~~~~~~~-~~~v~iiG~G~aG~~~al~~~~~~~~V 114 (535)
...++..++++++|++|+|+ +|| ||.++++++.+.+..+. +..++ |..++. +..++....+..+|
T Consensus 5 ~~~~v~~~i~~~~Vvvfsk~t~~~p~Cp-~C~~ak~lL~~~gv~~~~~~~~d-v~~~~~-~~~~l~~~sg~~tv 75 (121)
T 3gx8_A 5 IRKAIEDAIESAPVVLFMKGTPEFPKCG-FSRATIGLLGNQGVDPAKFAAYN-VLEDPE-LREGIKEFSEWPTI 75 (121)
T ss_dssp HHHHHHHHHHSCSEEEEESBCSSSBCTT-HHHHHHHHHHHHTBCGGGEEEEE-CTTCHH-HHHHHHHHHTCCSS
T ss_pred HHHHHHHHhccCCEEEEEeccCCCCCCc-cHHHHHHHHHHcCCCcceEEEEE-ecCCHH-HHHHHHHHhCCCCC
Confidence 56788999999999999997 999 99999999999997732 22333 334455 77788776655544
No 201
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.75 E-value=0.00013 Score=76.56 Aligned_cols=97 Identities=21% Similarity=0.077 Sum_probs=68.2
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEcCcCC---------c---------------------------cCc-H---
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYSRRLL---------K---------------------------HFD-Q--- 281 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~l---------~---------------------------~~~-~--- 281 (535)
.+|+|||||+.|+.+|..|++.|.+|+++++..+. | ..+ +
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 83 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFAKVQ 83 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHHHHH
Confidence 46999999999999999999999999999984211 0 000 0
Q ss_pred --------HHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 282 --------EMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 282 --------~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
.+.+.+.+.+++.||++ .+..+. ++ .+.+.|.. .+|+ .++.+|.+++|+|.+|....
T Consensus 84 ~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-id---~~~v~V~~---~~G~-~~i~~d~lViATGs~p~~~~ 149 (455)
T 1ebd_A 84 EWKASVVKKLTGGVEGLLKGNKVEIVKGEAYF-VD---ANTVRVVN---GDSA-QTYTFKNAIIATGSRPIELP 149 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEESEEEE-EE---TTEEEEEE---TTEE-EEEECSEEEECCCEEECCBT
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-cc---CCeEEEEe---CCCc-EEEEeCEEEEecCCCCCCCC
Confidence 12222345667789999 877553 43 34556655 2552 37999999999999887643
No 202
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.75 E-value=0.00017 Score=76.25 Aligned_cols=95 Identities=19% Similarity=0.054 Sum_probs=65.5
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCcc----------------------------C---------c---
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKH----------------------------F---------D--- 280 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~----------------------------~---------~--- 280 (535)
.+|+|||||+.|+.+|..|+++|.+|+++++ +.+... + +
T Consensus 26 ~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 105 (491)
T 3urh_A 26 YDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKLNLQK 105 (491)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEECHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCccCHHH
Confidence 5799999999999999999999999999998 654210 0 0
Q ss_pred ---------HHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCC
Q psy14461 281 ---------QEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFD 343 (535)
Q Consensus 281 ---------~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~ 343 (535)
..+...+...+++.+|++ .+.... +. .+.+.|.. .+|+..++.+|.+++|||.+|.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~-~~---~~~~~v~~---~~g~~~~~~~d~lViATGs~p~ 171 (491)
T 3urh_A 106 MMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKV-LG---QGKVSVTN---EKGEEQVLEAKNVVIATGSDVA 171 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE-CS---SSEEEEEC---TTSCEEEEECSEEEECCCEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-ec---CCEEEEEe---CCCceEEEEeCEEEEccCCCCC
Confidence 011122334456778888 655322 21 34455553 3665568999999999998874
No 203
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.72 E-value=9.9e-05 Score=78.34 Aligned_cols=125 Identities=11% Similarity=-0.026 Sum_probs=69.5
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccccccccccccccccc-----chhhcccccccccccccCHHHHHH
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMS-----DLELEQDSTSALNVTIRNWNAATK 162 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~-----~~~~~~~~~~~~~~~~~~~~~l~~ 162 (535)
..+|+|||+|++|+.+|+.+...+.+|+|||+.+.++... .....+..+. +.......+.......++..
T Consensus 92 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~-~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~---- 166 (497)
T 2bry_A 92 NTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHN-VLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIR---- 166 (497)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCC-EEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHH----
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCC-cccCChhHHHHHHHcCCccccccccccccccCCHH----
Confidence 3689999999999999999888899999999987653211 0000000000 00000000000000001111
Q ss_pred HHHHHHHHHHHHHHHHHHhcCcEEEEeE-EEEec-------CCEEEE----ce--eEEEcceEEEeeCceecC-CCC
Q psy14461 163 LIKRFCIRAKNDSMRELKALGIDIVRTA-AAFTN-------PHTIKL----SN--RSVTGFNFLLAVERRCLP-EPR 224 (535)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~gV~~~~g~-~~~~~-------~~~v~~----~~--~~~~~d~lViATGs~p~~-~i~ 224 (535)
.+...+.+.+++.||+++.++ +..+. ...|++ ++ .++.+|+||+|||+.+.. ...
T Consensus 167 -------~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r~~~ 236 (497)
T 2bry_A 167 -------QLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPEGFT 236 (497)
T ss_dssp -------HHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCTTCE
T ss_pred -------HHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCccccccc
Confidence 222233355666799998875 33322 125665 22 368999999999998765 443
No 204
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=97.70 E-value=5.9e-05 Score=63.52 Aligned_cols=63 Identities=16% Similarity=0.232 Sum_probs=49.1
Q ss_pred ChhHHHHhhhcCCcEEEEeCC-----CchhhHHHHHHHHHhcCCc-ceEEEEEeeCCccHHHHHHHHHhhCCCe
Q psy14461 46 TPPAYISRLSYENRILIFTHA-----VLREENARAERYLNARGDR-FAVLYLDRIGDEGILLEEELKRQTNQRR 113 (535)
Q Consensus 46 ~l~~~~~~~i~~~~v~v~~k~-----~cp~~~~~~k~~~~~~~~~-~~~~~v~iiG~G~aG~~~al~~~~~~~~ 113 (535)
.+..++..++++++|++|+|+ +|| ||.++++++.+.+.+ +..++|. ..+. +..++....+..+
T Consensus 8 ~~~~~v~~~i~~~~Vvvfsk~t~~~p~Cp-~C~~ak~lL~~~gv~~~~~vdV~---~d~~-~~~~l~~~tg~~t 76 (118)
T 2wem_A 8 GSAEQLDALVKKDKVVVFLKGTPEQPQCG-FSNAVVQILRLHGVRDYAAYNVL---DDPE-LRQGIKDYSNWPT 76 (118)
T ss_dssp -CHHHHHHHHHHSSEEEEESBCSSSBSSH-HHHHHHHHHHHTTCCCCEEEESS---SCHH-HHHHHHHHHTCCS
T ss_pred cHHHHHHHHhccCCEEEEEecCCCCCccH-HHHHHHHHHHHcCCCCCEEEEcC---CCHH-HHHHHHHHhCCCC
Confidence 567889999999999999997 999 999999999999984 7666654 3344 6677766654433
No 205
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.70 E-value=0.00022 Score=72.52 Aligned_cols=31 Identities=32% Similarity=0.505 Sum_probs=29.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
.+|+|||||.+|+.+|..|++.|.+|+|+++
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~ 36 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAKRGEEVTVIEK 36 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 4799999999999999999999999999997
No 206
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.70 E-value=0.00012 Score=77.13 Aligned_cols=98 Identities=9% Similarity=-0.044 Sum_probs=67.4
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCcc--------------------------------------Cc-H
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKH--------------------------------------FD-Q 281 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~--------------------------------------~~-~ 281 (535)
.+|+|||||+.|+.+|..|++.|.+|+++++ +.+... .+ +
T Consensus 7 ~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 86 (474)
T 1zmd_A 7 ADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLNLD 86 (474)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEECHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCccCHH
Confidence 4699999999999999999999999999999 543100 00 0
Q ss_pred H-----------HHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 282 E-----------MVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 282 ~-----------~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
. +...+.+.+++.||++ .+..+ .++ .+.+.|.+ .+|...++.+|.+|+|+|.+|....
T Consensus 87 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~~~---~~~~~v~~---~~gg~~~~~~d~lViAtGs~p~~p~ 156 (474)
T 1zmd_A 87 KMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGK-ITG---KNQVTATK---ADGGTQVIDTKNILIATGSEVTPFP 156 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEE-EEE---TTEEEEEC---TTSCEEEEEEEEEEECCCEEECCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-Eec---CCEEEEEe---cCCCcEEEEeCEEEECCCCCCCCCC
Confidence 1 1112345567789999 77643 332 34455554 2422237999999999999887643
No 207
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.70 E-value=0.00011 Score=75.00 Aligned_cols=36 Identities=19% Similarity=0.118 Sum_probs=32.5
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLS 124 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~ 124 (535)
++|+|||+|++|+.+|+.+...+.+|+|+|+.+...
T Consensus 12 ~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~ 47 (379)
T 3alj_A 12 RRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELR 47 (379)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCC
Confidence 578999999999999999888899999999987653
No 208
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.70 E-value=1.7e-05 Score=83.26 Aligned_cols=87 Identities=16% Similarity=0.095 Sum_probs=67.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcC-------Cc--cCcHHHHHHHHHhhhcCCeEE-cceEEEEEEE
Q psy14461 240 WPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRL-------LK--HFDQEMVRILLSSLTKAGVSI-QCCVIEKVIS 308 (535)
Q Consensus 240 ~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~-------l~--~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~ 308 (535)
..++|+|||||+.|+.+|..|++.|.+|+++++ +.+ .| .++.++.....+.+++.||++ .++.+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~---- 196 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVG---- 196 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTTCEEETTCCBT----
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCcEEEeCCEec----
Confidence 357899999999999999999999999999998 654 23 235677777788888999999 887642
Q ss_pred eCCCcEEEEEecCCCCCceEEEcCEEEEccCCC
Q psy14461 309 SFDGMKGVRGFHPESKEPFADVFKTVVNAMEKK 341 (535)
Q Consensus 309 ~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~ 341 (535)
. .+++. ++ .+++|.|++|+|..
T Consensus 197 ---~--~v~~~---~~---~~~~d~vvlAtG~~ 218 (456)
T 2vdc_G 197 ---R--DASLP---EL---RRKHVAVLVATGVY 218 (456)
T ss_dssp ---T--TBCHH---HH---HSSCSEEEECCCCC
T ss_pred ---c--EEEhh---Hh---HhhCCEEEEecCCC
Confidence 1 12221 22 25699999999986
No 209
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.69 E-value=0.00011 Score=73.76 Aligned_cols=92 Identities=14% Similarity=0.098 Sum_probs=65.6
Q ss_pred cEEEECCChHHHHHHHHHHh---CCCcEEEEEc-CcCCc--------------------c---CcH---HHHHH------
Q psy14461 243 KTLVLGGSLMAVEIAATLNF---LGVPVTLVYS-RRLLK--------------------H---FDQ---EMVRI------ 286 (535)
Q Consensus 243 ~vvViGgG~~g~e~A~~l~~---~g~~Vtlv~~-~~~l~--------------------~---~~~---~~~~~------ 286 (535)
+|+|||||.+|+-+|..|++ .|.+|+++++ +.+.. . .+. .+...
T Consensus 3 dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~ 82 (342)
T 3qj4_A 3 QVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELLA 82 (342)
T ss_dssp EEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHHH
T ss_pred cEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHHh
Confidence 69999999999999999999 8999999987 43210 0 000 11111
Q ss_pred --------------------------------HHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCE
Q psy14461 287 --------------------------------LLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKT 333 (535)
Q Consensus 287 --------------------------------~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~ 333 (535)
++...++.|+++ +++.|++|+.+ ++.+.|++. +|+ ++.+|.
T Consensus 83 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~-~~~~~v~~~---~g~--~~~ad~ 156 (342)
T 3qj4_A 83 YGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLR-DDKWEVSKQ---TGS--PEQFDL 156 (342)
T ss_dssp TTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEEC-SSSEEEEES---SSC--CEEESE
T ss_pred CCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEc-CCEEEEEEC---CCC--EEEcCE
Confidence 111222238999 99999999886 466777763 676 579999
Q ss_pred EEEccCC
Q psy14461 334 VVNAMEK 340 (535)
Q Consensus 334 vi~a~G~ 340 (535)
||+|+..
T Consensus 157 vV~A~p~ 163 (342)
T 3qj4_A 157 IVLTMPV 163 (342)
T ss_dssp EEECSCH
T ss_pred EEECCCH
Confidence 9999874
No 210
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.69 E-value=0.00016 Score=76.23 Aligned_cols=97 Identities=23% Similarity=0.175 Sum_probs=67.4
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEcCcCC---------------------------------------c---cC
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYSRRLL---------------------------------------K---HF 279 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~l---------------------------------------~---~~ 279 (535)
.+|+|||||+.|+.+|..|++.|.+|+++++..+. + .+
T Consensus 12 ~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 91 (479)
T 2hqm_A 12 YDYLVIGGGSGGVASARRAASYGAKTLLVEAKALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEHLTF 91 (479)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGGCCB
T ss_pred CCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCCcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCcccccccccccCcc
Confidence 47999999999999999999999999999983210 0 00
Q ss_pred c------------HHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCC
Q psy14461 280 D------------QEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFA 345 (535)
Q Consensus 280 ~------------~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~ 345 (535)
+ ..+...+.+.+++.||++ .+. +..++ .+.+.|.. .+|+..++.+|.+++|+|.+|...
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i~---~~~~~v~~---~~g~~~~~~~d~lviAtGs~p~~p 163 (479)
T 2hqm_A 92 NWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGW-ARFNK---DGNVEVQK---RDNTTEVYSANHILVATGGKAIFP 163 (479)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEE-EEECT---TSCEEEEE---SSSCCEEEEEEEEEECCCEEECCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEee---CCEEEEEe---CCCcEEEEEeCEEEEcCCCCCCCC
Confidence 0 011122344566789999 664 54442 34455655 256545799999999999998765
No 211
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=97.67 E-value=0.00022 Score=72.62 Aligned_cols=52 Identities=10% Similarity=0.017 Sum_probs=38.1
Q ss_pred HHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCC
Q psy14461 285 RILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFD 343 (535)
Q Consensus 285 ~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~ 343 (535)
..+.+.+++.|+++ .+++|++++.+ ++.+.|++ .+| ++.+|.||+|+|...+
T Consensus 154 ~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~~~v~~---~~g---~~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 154 RAYRELAEARGAKVLTHTRVEDFDIS-PDSVKIET---ANG---SYTADKLIVSMGAWNS 206 (389)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEEC-SSCEEEEE---TTE---EEEEEEEEECCGGGHH
T ss_pred HHHHHHHHHCCCEEEcCcEEEEEEec-CCeEEEEe---CCC---EEEeCEEEEecCccHH
Confidence 34445566779999 99999999876 34566654 234 6999999999997643
No 212
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.67 E-value=0.00017 Score=73.05 Aligned_cols=51 Identities=10% Similarity=0.089 Sum_probs=37.9
Q ss_pred HHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCC
Q psy14461 285 RILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKF 342 (535)
Q Consensus 285 ~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p 342 (535)
..+.+.+++.|+++ .+++|++++.+ ++.+.|+. .+| ++.+|.||+|+|...
T Consensus 153 ~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~~~v~~---~~g---~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 153 KTWIQLAKEAGCAQLFNCPVTAIRHD-DDGVTIET---ADG---EYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEEC-SSSEEEEE---SSC---EEEEEEEEECCGGGG
T ss_pred HHHHHHHHHCCCEEEcCCEEEEEEEc-CCEEEEEE---CCC---eEEcCEEEEcCCccH
Confidence 34445566789999 99999999876 34566655 245 489999999999653
No 213
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=97.67 E-value=5.2e-05 Score=63.55 Aligned_cols=64 Identities=14% Similarity=0.180 Sum_probs=50.0
Q ss_pred ChhHHHHhhhcCCcEEEEeCC-----CchhhHHHHHHHHHhcCC-cceEEEEEeeCCccHHHHHHHHHhhCCCeE
Q psy14461 46 TPPAYISRLSYENRILIFTHA-----VLREENARAERYLNARGD-RFAVLYLDRIGDEGILLEEELKRQTNQRRD 114 (535)
Q Consensus 46 ~l~~~~~~~i~~~~v~v~~k~-----~cp~~~~~~k~~~~~~~~-~~~~~~v~iiG~G~aG~~~al~~~~~~~~V 114 (535)
..+..++.+|++|+|++|+|. +|| ||.+++.++...+. ++..+ ++ -.++. +..++...++..+|
T Consensus 8 ~~~e~i~~~i~~~~VvvF~Kgt~~~P~C~-fc~~ak~lL~~~gv~~~~~~--~v-~~~~~-~r~~l~~~sg~~Tv 77 (118)
T 2wul_A 8 GSAEQLDALVKKDKVVVFLKGTPEQPQCG-FSNAVVQILRLHGVRDYAAY--NV-LDDPE-LRQGIKDYSNWPTI 77 (118)
T ss_dssp -CHHHHHHHHHHSSEEEEESBCSSSBSSH-HHHHHHHHHHHTTCCSCEEE--ET-TSCHH-HHHHHHHHHTCCSS
T ss_pred chHHHHHHHHhcCCEEEEEcCCCCCCCCH-HHHHHHHHHHHhCCcCeEee--cc-cCCHH-HHHHHHHhccCCCC
Confidence 456788999999999999985 799 99999999999986 45433 33 34465 89999888776655
No 214
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.65 E-value=3.7e-05 Score=81.60 Aligned_cols=95 Identities=17% Similarity=0.192 Sum_probs=66.4
Q ss_pred CcEEEECCChHHHHHHHHHHhC--CCcEEEEEc-CcCC---ccCcH------H--HHHHH----------------HH--
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFL--GVPVTLVYS-RRLL---KHFDQ------E--MVRIL----------------LS-- 289 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~--g~~Vtlv~~-~~~l---~~~~~------~--~~~~~----------------~~-- 289 (535)
.+|+|||||+.|+.+|..|++. |.+|+++++ +.+. +.+.. . ..... .+
T Consensus 12 ~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (493)
T 1m6i_A 12 VPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPPSFY 91 (493)
T ss_dssp EEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCGGGS
T ss_pred CCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccchHhh
Confidence 4799999999999999999887 889999998 5431 10000 0 00000 00
Q ss_pred ----h---hhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCC
Q psy14461 290 ----S---LTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDF 344 (535)
Q Consensus 290 ----~---l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~ 344 (535)
. +.+.||++ .++.+.+++.. . .+|++ .+|+ ++.+|.+++|||.+|..
T Consensus 92 ~~~~~l~~~~~~gv~~~~g~~v~~id~~-~--~~V~~---~~g~--~i~yd~lviATGs~p~~ 146 (493)
T 1m6i_A 92 VSAQDLPHIENGGVAVLTGKKVVQLDVR-D--NMVKL---NDGS--QITYEKCLIATGGTPRS 146 (493)
T ss_dssp BCTTTTTTSTTCEEEEEETCCEEEEEGG-G--TEEEE---TTSC--EEEEEEEEECCCEEECC
T ss_pred cchhhhhhhhcCCeEEEcCCEEEEEECC-C--CEEEE---CCCC--EEECCEEEECCCCCCCC
Confidence 0 12468999 99999999864 2 25666 3676 79999999999998864
No 215
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.65 E-value=8.9e-05 Score=77.91 Aligned_cols=96 Identities=15% Similarity=0.044 Sum_probs=67.1
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEEcCcCC---------cc---------------------------Cc-H----
Q psy14461 243 KTLVLGGSLMAVEIAATLNFLGVPVTLVYSRRLL---------KH---------------------------FD-Q---- 281 (535)
Q Consensus 243 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~l---------~~---------------------------~~-~---- 281 (535)
+|+|||||+.|+.+|..|++.|.+|+++++..+. |. .+ +
T Consensus 5 dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 84 (464)
T 2a8x_A 5 DVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKYWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYGIAYD 84 (464)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCHHHHHH
Confidence 6999999999999999999999999999983211 00 00 0
Q ss_pred -------HHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCC
Q psy14461 282 -------EMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFA 345 (535)
Q Consensus 282 -------~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~ 345 (535)
.+...+.+.+++.||++ .++.+. + + .+.+.|.+ .+|+..++.+|.+++|+|.+|...
T Consensus 85 ~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~-i--d-~~~v~V~~---~~G~~~~~~~d~lViAtG~~~~~~ 149 (464)
T 2a8x_A 85 RSRKVAEGRVAGVHFLMKKNKITEIHGYGTF-A--D-ANTLLVDL---NDGGTESVTFDNAIIATGSSTRLV 149 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEEECEEEEE-S--S-SSEEEEEE---TTSCCEEEEEEEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-e--c-CCeEEEEe---CCCceEEEEcCEEEECCCCCCCCC
Confidence 01122345567789999 776543 2 2 34556665 356334899999999999988654
No 216
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=97.63 E-value=0.00017 Score=73.91 Aligned_cols=31 Identities=19% Similarity=0.234 Sum_probs=29.4
Q ss_pred CcEEEECCChHHHHHHHHHHh-CC-CcEEEEEc
Q psy14461 242 GKTLVLGGSLMAVEIAATLNF-LG-VPVTLVYS 272 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~-~g-~~Vtlv~~ 272 (535)
.+|+|||||.+|+.+|..|++ .| .+|+|+++
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~ 54 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKNHGITNVAVLEK 54 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCCEEEECS
T ss_pred CCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 479999999999999999999 99 99999987
No 217
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.62 E-value=0.00013 Score=77.04 Aligned_cols=100 Identities=18% Similarity=0.051 Sum_probs=67.0
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCc------------------------------------cCc-HH-
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLK------------------------------------HFD-QE- 282 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~------------------------------------~~~-~~- 282 (535)
.+|+|||||+.|+.+|..|++.|.+|+++++ +.+.. ..+ ..
T Consensus 7 ~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~~~~ 86 (482)
T 1ojt_A 7 YDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDML 86 (482)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCHHHH
Confidence 3699999999999999999999999999998 65310 001 01
Q ss_pred ----------HHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecC-------CCCCceEEEcCEEEEccCCCCCC
Q psy14461 283 ----------MVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHP-------ESKEPFADVFKTVVNAMEKKFDF 344 (535)
Q Consensus 283 ----------~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~-------~~G~~~~~~~D~vi~a~G~~p~~ 344 (535)
+...+.+.+++.||++ .+..+. + + ++.+.|...+. .+|+..++.+|.+|+|+|..|..
T Consensus 87 ~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~--~-~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~~ 162 (482)
T 1ojt_A 87 RAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF-L--D-PHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTK 162 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE-E--E-TTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE-c--c-CCEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCCC
Confidence 1112334566789999 776543 2 2 34455554310 01222479999999999999875
Q ss_pred C
Q psy14461 345 A 345 (535)
Q Consensus 345 ~ 345 (535)
.
T Consensus 163 ~ 163 (482)
T 1ojt_A 163 L 163 (482)
T ss_dssp C
T ss_pred C
Confidence 4
No 218
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.62 E-value=0.00033 Score=77.22 Aligned_cols=50 Identities=14% Similarity=0.104 Sum_probs=38.5
Q ss_pred HHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCC
Q psy14461 287 LLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKF 342 (535)
Q Consensus 287 ~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p 342 (535)
+.+.+++.|+++ .+++|+++..+ ++.+.|++ .+|. ++.+|.||+|+|...
T Consensus 423 L~~~a~~~Gv~i~~~t~V~~l~~~-~~~v~V~t---~~G~--~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 423 VLELAQQQGLQIYYQYQLQNFSRK-DDCWLLNF---AGDQ--QATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHTTCEEEESCCEEEEEEE-TTEEEEEE---TTSC--EEEESEEEECCGGGG
T ss_pred HHHHHHhCCCEEEeCCeeeEEEEe-CCeEEEEE---CCCC--EEECCEEEECCCcch
Confidence 334445679999 99999999877 46666665 3566 699999999999763
No 219
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.61 E-value=7.7e-05 Score=62.14 Aligned_cols=67 Identities=21% Similarity=0.249 Sum_probs=51.3
Q ss_pred ChhHHHHhhhcCCcEEEEeCCCchhhHHHHHHHHHhcCCcceEEEEEeeC-CccHHHHHHHHHhhCCCeE
Q psy14461 46 TPPAYISRLSYENRILIFTHAVLREENARAERYLNARGDRFAVLYLDRIG-DEGILLEEELKRQTNQRRD 114 (535)
Q Consensus 46 ~l~~~~~~~i~~~~v~v~~k~~cp~~~~~~k~~~~~~~~~~~~~~v~iiG-~G~aG~~~al~~~~~~~~V 114 (535)
....++..++..++|++|++++|| +|.+++.++.+.+.++..++++... .++. +...+....+..+|
T Consensus 7 ~~~~~~~~~i~~~~v~vy~~~~Cp-~C~~~~~~L~~~~i~~~~~di~~~~~~~~~-~~~~l~~~~g~~tv 74 (113)
T 3rhb_A 7 RMEESIRKTVTENTVVIYSKTWCS-YCTEVKTLFKRLGVQPLVVELDQLGPQGPQ-LQKVLERLTGQHTV 74 (113)
T ss_dssp HHHHHHHHHHHHSSEEEEECTTCH-HHHHHHHHHHHTTCCCEEEEGGGSTTHHHH-HHHHHHHHHSCCSS
T ss_pred HHHHHHHHHHhcCCEEEEECCCCh-hHHHHHHHHHHcCCCCeEEEeecCCCChHH-HHHHHHHHhCCCCc
Confidence 456788888999999999999999 9999999999999988777766543 2233 56666665554443
No 220
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.61 E-value=0.00013 Score=77.88 Aligned_cols=99 Identities=10% Similarity=0.011 Sum_probs=66.7
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-Cc--------CCc-----------------------------------
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RR--------LLK----------------------------------- 277 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~--------~l~----------------------------------- 277 (535)
-+|+|||+|+.|+.+|..|++.|.+|+++++ +. +-.
T Consensus 33 ~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~~~ 112 (519)
T 3qfa_A 33 YDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVEE 112 (519)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCcccCC
Confidence 4799999999999999999999999999997 31 100
Q ss_pred --cCc-H-----------HHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCC
Q psy14461 278 --HFD-Q-----------EMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKF 342 (535)
Q Consensus 278 --~~~-~-----------~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p 342 (535)
..+ + .+...+...++..+|++ .+. ...+. ...+.|.. .+|+.+++.+|.+|+|||.+|
T Consensus 113 ~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~-a~~~d---~~~v~v~~---~~g~~~~i~~d~lViATGs~p 185 (519)
T 3qfa_A 113 TVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAY-GQFIG---PHRIKATN---NKGKEKIYSAERFLIATGERP 185 (519)
T ss_dssp SCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSE-EEEEE---TTEEEEEC---TTCCCCEEEEEEEEECCCEEE
T ss_pred cCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEee---CCEEEEEc---CCCCEEEEECCEEEEECCCCc
Confidence 000 0 11112233456778998 554 44443 34445543 356556899999999999998
Q ss_pred CCCCC
Q psy14461 343 DFAAL 347 (535)
Q Consensus 343 ~~~~l 347 (535)
....+
T Consensus 186 ~~p~i 190 (519)
T 3qfa_A 186 RYLGI 190 (519)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 76543
No 221
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.60 E-value=8.7e-05 Score=78.27 Aligned_cols=95 Identities=13% Similarity=0.032 Sum_probs=66.0
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCcc--------------------------------------Cc-H
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKH--------------------------------------FD-Q 281 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~--------------------------------------~~-~ 281 (535)
.+|+|||||+.|+.+|..|++.|.+|+++++ +.+... ++ +
T Consensus 6 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~ 85 (478)
T 1v59_A 6 HDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKINVA 85 (478)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEECHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCHH
Confidence 4699999999999999999999999999998 543100 00 0
Q ss_pred H-----------HHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceE------EEcCEEEEccCCCCC
Q psy14461 282 E-----------MVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFA------DVFKTVVNAMEKKFD 343 (535)
Q Consensus 282 ~-----------~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~------~~~D~vi~a~G~~p~ 343 (535)
+ +...+.+.+++.||++ .++.+.. + .+.+.|.+ .+|+..+ +.+|.+|+|+|.+|.
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~---~-~~~v~V~~---~~G~~~~~~~~~~i~~d~lViAtGs~p~ 158 (478)
T 1v59_A 86 NFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFE---D-ETKIRVTP---VDGLEGTVKEDHILDVKNIIVATGSEVT 158 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEES---S-SSEEEEEC---CTTCTTCCSSCEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEc---c-CCeEEEEe---cCCCcccccccceEEeCEEEECcCCCCC
Confidence 0 1112334566789999 8876542 2 34455554 2552225 999999999999884
No 222
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.60 E-value=0.00041 Score=73.61 Aligned_cols=56 Identities=11% Similarity=0.044 Sum_probs=41.0
Q ss_pred HHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCC
Q psy14461 286 ILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKF 342 (535)
Q Consensus 286 ~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p 342 (535)
.+.+.+++.|+++ .+++|+++..+ ++...|++.+..+|++.++.+|.||.|+|.-.
T Consensus 154 ~l~~~a~~~Gv~i~~~~~V~~l~~~-~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 154 ANAQMVVRKGGEVLTRTRATSARRE-NGLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHTTCEEECSEEEEEEEEE-TTEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHcCCEEEcCcEEEEEEEe-CCEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 3445556789999 99999999876 34456666532357655799999999999653
No 223
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=97.58 E-value=0.00011 Score=60.81 Aligned_cols=64 Identities=13% Similarity=0.166 Sum_probs=49.7
Q ss_pred ChhHHHHhhhcCCcEEEEeCC-----CchhhHHHHHHHHHhcCCcceEEEEEeeCCccHHHHHHHHHhhCCCeE
Q psy14461 46 TPPAYISRLSYENRILIFTHA-----VLREENARAERYLNARGDRFAVLYLDRIGDEGILLEEELKRQTNQRRD 114 (535)
Q Consensus 46 ~l~~~~~~~i~~~~v~v~~k~-----~cp~~~~~~k~~~~~~~~~~~~~~v~iiG~G~aG~~~al~~~~~~~~V 114 (535)
++..++..++++++|++|+++ +|| +|.++++++.+.+.++..++|. ..+. +..++....+..+|
T Consensus 6 ~~~~~v~~~i~~~~Vvvy~k~t~~~p~Cp-~C~~ak~~L~~~gi~~~~~dI~---~~~~-~~~~l~~~~g~~tv 74 (109)
T 3ipz_A 6 QLKDTLEKLVNSEKVVLFMKGTRDFPMCG-FSNTVVQILKNLNVPFEDVNIL---ENEM-LRQGLKEYSNWPTF 74 (109)
T ss_dssp HHHHHHHHHHTSSSEEEEESBCSSSBSSH-HHHHHHHHHHHTTCCCEEEEGG---GCHH-HHHHHHHHHTCSSS
T ss_pred HHHHHHHHHHccCCEEEEEecCCCCCCCh-hHHHHHHHHHHcCCCcEEEECC---CCHH-HHHHHHHHHCCCCC
Confidence 457788999999999999997 899 9999999999999887665543 2344 66777666554433
No 224
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.58 E-value=0.00038 Score=74.05 Aligned_cols=58 Identities=17% Similarity=0.142 Sum_probs=41.7
Q ss_pred HHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcE-EEEEecCCCCCceEEEcC-EEEEccCCCC
Q psy14461 283 MVRILLSSLTKAGVSI-QCCVIEKVISSFDGMK-GVRGFHPESKEPFADVFK-TVVNAMEKKF 342 (535)
Q Consensus 283 ~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~-~v~~~~~~~G~~~~~~~D-~vi~a~G~~p 342 (535)
+...+.+.+++.||++ +++.++++..++++++ .|.+.. +|+..++.+| .||+|+|--.
T Consensus 204 l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~--~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 204 LMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQ--YGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEE--TTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEE--CCcEEEEEeCCeEEEeCCChh
Confidence 3344455566789999 9999999987633554 366553 5665679997 9999998654
No 225
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.58 E-value=0.00032 Score=75.94 Aligned_cols=101 Identities=16% Similarity=0.159 Sum_probs=73.8
Q ss_pred CcEEEECCChHHHHHHHHHHhC------CCcEEEEEc-CcCCcc------------------------------------
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFL------GVPVTLVYS-RRLLKH------------------------------------ 278 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~-~~~l~~------------------------------------ 278 (535)
-+|+|||||+.|+-+|..|++. |.+|+|+++ +.+...
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~~ 115 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRFG 115 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhee
Confidence 4799999999999999999998 999999997 432100
Q ss_pred ---------C---c--------------HHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEE-EEEec---CCCCCc-
Q psy14461 279 ---------F---D--------------QEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKG-VRGFH---PESKEP- 326 (535)
Q Consensus 279 ---------~---~--------------~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~-v~~~~---~~~G~~- 326 (535)
+ + ..+.+.+.+.+++.||++ .++.++++..++++.+. |.+.+ ..+|+.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~ 195 (584)
T 2gmh_A 116 ILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPK 195 (584)
T ss_dssp EECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEE
T ss_pred eeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcc
Confidence 0 0 134556667777789999 99999999876445554 66531 013421
Q ss_pred ------eEEEcCEEEEccCCCC
Q psy14461 327 ------FADVFKTVVNAMEKKF 342 (535)
Q Consensus 327 ------~~~~~D~vi~a~G~~p 342 (535)
.++.+|.||.|.|...
T Consensus 196 ~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 196 TTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp EEEECCCEEECSEEEECCCTTC
T ss_pred cccCCceEEECCEEEEeeCCCc
Confidence 3799999999999764
No 226
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.56 E-value=0.00022 Score=76.15 Aligned_cols=94 Identities=14% Similarity=0.080 Sum_probs=68.0
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCc---------------------------------cC------cH
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLK---------------------------------HF------DQ 281 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~---------------------------------~~------~~ 281 (535)
.+|+|||||+.|+.+|..|++.|.+|+++++ +.+.. .+ ..
T Consensus 44 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 123 (523)
T 1mo9_A 44 YDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVVGIK 123 (523)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCCCHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhhhHH
Confidence 5799999999999999999999999999999 63211 00 12
Q ss_pred HHHHHHH-------Hhh-----hcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 282 EMVRILL-------SSL-----TKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 282 ~~~~~~~-------~~l-----~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
++...+. +.+ ++.||++ ...+++.++. . .|.+ +|+ ++.+|.+++|+|.+|....
T Consensus 124 ~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~---~--~v~~----~g~--~~~~d~lViATGs~p~~p~ 190 (523)
T 1mo9_A 124 EVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN---H--TVEA----AGK--VFKAKNLILAVGAGPGTLD 190 (523)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET---T--EEEE----TTE--EEEBSCEEECCCEECCCCC
T ss_pred HHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC---C--EEEE----CCE--EEEeCEEEECCCCCCCCCC
Confidence 2222222 445 6778998 6888877752 2 3555 354 7999999999999887654
No 227
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.55 E-value=8.2e-05 Score=76.13 Aligned_cols=96 Identities=9% Similarity=0.068 Sum_probs=68.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCC--CcEEEEEc-CcCCc---cC---------cHHHHH-HHHHhhhcCCeEE-cceEEE
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLG--VPVTLVYS-RRLLK---HF---------DQEMVR-ILLSSLTKAGVSI-QCCVIE 304 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g--~~Vtlv~~-~~~l~---~~---------~~~~~~-~~~~~l~~~gV~i-~~~~v~ 304 (535)
.+|+|||||+.|+.+|..|++.| .+|+++++ +...+ .+ ..++.. .+.+.+++.|+++ .+.+++
T Consensus 5 ~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~ 84 (384)
T 2v3a_A 5 APLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNARILTHTRVT 84 (384)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGGGGGGTTTTTCCHHHHEEECHHHHHHHTTCEEECSCCCC
T ss_pred CcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcccccHHHhCCCCHHHhhccCHHHHHHhCCcEEEeCCEEE
Confidence 57999999999999999999998 56899987 42111 00 112211 2344456789999 898898
Q ss_pred EEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 305 KVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 305 ~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
.++.. + ..|++ ++. ++.+|.+++|+|.+|....
T Consensus 85 ~i~~~-~--~~v~~----~~~--~~~~d~lviAtG~~p~~p~ 117 (384)
T 2v3a_A 85 GIDPG-H--QRIWI----GEE--EVRYRDLVLAWGAEPIRVP 117 (384)
T ss_dssp EEEGG-G--TEEEE----TTE--EEECSEEEECCCEEECCCC
T ss_pred EEECC-C--CEEEE----CCc--EEECCEEEEeCCCCcCCCC
Confidence 88753 1 24555 333 6999999999999987643
No 228
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.54 E-value=0.00054 Score=70.08 Aligned_cols=30 Identities=20% Similarity=0.255 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 243 KTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 243 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
+|+|||||.+|+-+|..|+++|.+|+|+++
T Consensus 6 DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~ 35 (397)
T 2oln_A 6 DVVVVGGGPVGLATAWQVAERGHRVLVLER 35 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 699999999999999999999999999998
No 229
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.54 E-value=0.00047 Score=74.04 Aligned_cols=96 Identities=14% Similarity=0.122 Sum_probs=69.5
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCcc-----Cc-----------------------------------
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKH-----FD----------------------------------- 280 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~-----~~----------------------------------- 280 (535)
.+|+|||||++|+-+|..|++.|.+|+|+++ +.+... +.
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 106 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTRV 106 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESSB
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEeccC
Confidence 3699999999999999999999999999987 432100 00
Q ss_pred -------------------------------HHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceE
Q psy14461 281 -------------------------------QEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFA 328 (535)
Q Consensus 281 -------------------------------~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~ 328 (535)
..+.+.+.+.+++. + .++++++++.+ ++.+++++.+..+|++.+
T Consensus 107 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~-~~~v~v~~~~~~~G~~~~ 182 (549)
T 2r0c_A 107 GGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQR-DDHVRATITDLRTGATRA 182 (549)
T ss_dssp TSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEEC-SSCEEEEEEETTTCCEEE
T ss_pred CCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEe-CCEEEEEEEECCCCCEEE
Confidence 12333444444444 7 89999999876 456777776433475558
Q ss_pred EEcCEEEEccCCC
Q psy14461 329 DVFKTVVNAMEKK 341 (535)
Q Consensus 329 ~~~D~vi~a~G~~ 341 (535)
+.+|.||.|.|..
T Consensus 183 i~a~~vVgADG~~ 195 (549)
T 2r0c_A 183 VHARYLVACDGAS 195 (549)
T ss_dssp EEEEEEEECCCTT
T ss_pred EEeCEEEECCCCC
Confidence 9999999999964
No 230
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.53 E-value=0.00021 Score=76.50 Aligned_cols=43 Identities=14% Similarity=0.153 Sum_probs=38.2
Q ss_pred eEcCCCCCc-CCCCEEEeCCcCCCCCCcHHHHHHHHHHHHHHHhC
Q psy14461 362 VVCNEKDQT-SVGNIFAVGGIVHGKPNNASMAAISARLIIERLYG 405 (535)
Q Consensus 362 i~vd~~~~T-~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g 405 (535)
|..|+.++| +++|+|+|||.+ |-..-+..|..+|..+|+.|+.
T Consensus 497 i~~~~~~~~~~~~gly~~Gega-G~a~gi~~Aa~~G~~~a~~i~~ 540 (549)
T 3nlc_A 497 IKRGKDFQSVNLKGFYPAGEGA-GYAGGILSAGIDGIKVAEAVAR 540 (549)
T ss_dssp CCCTTTTSCTTCBTEEECHHHH-TSCCSHHHHHHHHHHHHHHHHH
T ss_pred EEECCCceECCcCCEEEccccC-ChhhHHHHHHHHHHHHHHHHHH
Confidence 678899998 899999999999 8777888899999999998864
No 231
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.51 E-value=0.00038 Score=72.76 Aligned_cols=35 Identities=17% Similarity=0.116 Sum_probs=31.7
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHL 123 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~ 123 (535)
++|+|||+|++|+.+|+.+...+.+|+|+|+.+.+
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~ 61 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKL 61 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 57899999999999999988888999999998754
No 232
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.50 E-value=0.00023 Score=75.47 Aligned_cols=100 Identities=14% Similarity=0.052 Sum_probs=67.8
Q ss_pred CcEEEECCChHHHHHHHHHHhC---CCcEEEEEc-CcCCc-----------------------------c---------C
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFL---GVPVTLVYS-RRLLK-----------------------------H---------F 279 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~---g~~Vtlv~~-~~~l~-----------------------------~---------~ 279 (535)
.+|+|||||+.|+.+|..|+++ |.+|+++++ + +.. . .
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 81 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAKI 81 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------CB
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCcc
Confidence 3699999999999999999999 999999998 5 200 0 0
Q ss_pred c-HH-----------HHHHHHHhhhcCCeEE-cceEEEEEEEe---CCCcEEEEEecCCCCCceEEEcCEEEEccCCCCC
Q psy14461 280 D-QE-----------MVRILLSSLTKAGVSI-QCCVIEKVISS---FDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFD 343 (535)
Q Consensus 280 ~-~~-----------~~~~~~~~l~~~gV~i-~~~~v~~i~~~---~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~ 343 (535)
+ +. +...+.+.+++.||++ .+. +..++.. +++.+.|.. .+|++.++.+|.+++|+|.+|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i~~~~~~~~~~~~V~~---~~g~~~~~~~d~lviATGs~p~ 157 (499)
T 1xdi_A 82 SLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGR-GELIDSTPGLARHRIKATA---ADGSTSEHEADVVLVATGASPR 157 (499)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESE-EEECCSSSCCSSEEEEEEC---TTSCEEEEEESEEEECCCEEEC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEecCcccCCCCEEEEEe---CCCcEEEEEeCEEEEcCCCCCC
Confidence 1 11 1222456667889999 775 5555431 012334443 2454347999999999999887
Q ss_pred CCC
Q psy14461 344 FAA 346 (535)
Q Consensus 344 ~~~ 346 (535)
...
T Consensus 158 ~p~ 160 (499)
T 1xdi_A 158 ILP 160 (499)
T ss_dssp CCG
T ss_pred CCC
Confidence 543
No 233
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.50 E-value=0.00017 Score=76.11 Aligned_cols=94 Identities=20% Similarity=0.150 Sum_probs=65.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEcCcCC------------------------------------ccCc-----
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYSRRLL------------------------------------KHFD----- 280 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~l------------------------------------~~~~----- 280 (535)
.+|+|||||+.|+.+|..|++.|.+|++++++.+. +.++
T Consensus 21 ~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 100 (478)
T 3dk9_A 21 YDYLVIGGGSGGLASARRAAELGARAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNWRVIK 100 (478)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCCHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccCHHHHH
Confidence 57999999999999999999999999999983210 0001
Q ss_pred -------HHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCC
Q psy14461 281 -------QEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFA 345 (535)
Q Consensus 281 -------~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~ 345 (535)
..+...+...+++.||++ .+. +..+. .....|.. +|+ ++.+|.+++|+|.+|...
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~~~---~~~~~v~~----~g~--~~~~d~lviAtG~~p~~p 163 (478)
T 3dk9_A 101 EKRDAYVSRLNAIYQNNLTKSHIEIIRGH-AAFTS---DPKPTIEV----SGK--KYTAPHILIATGGMPSTP 163 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCEEEESC-EEECS---CSSCEEEE----TTE--EEECSCEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEee---CCeEEEEE----CCE--EEEeeEEEEccCCCCCCC
Confidence 112233445567789998 664 33222 22344553 565 799999999999988765
No 234
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.47 E-value=0.0003 Score=73.91 Aligned_cols=93 Identities=14% Similarity=0.090 Sum_probs=64.2
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEcCcCCc------------------------------------cCc-H---
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYSRRLLK------------------------------------HFD-Q--- 281 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~l~------------------------------------~~~-~--- 281 (535)
.+|+|||||+.|+.+|..|++.|.+|+++++..+.. ..+ +
T Consensus 5 ~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~ 84 (463)
T 2r9z_A 5 FDLIAIGGGSGGLAVAEKAAAFGKRVALIESKALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLDWPRLV 84 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CCHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCCCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcCHHHHH
Confidence 479999999999999999999999999999832100 000 0
Q ss_pred --------HHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCC
Q psy14461 282 --------EMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 282 --------~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
.+...+.+.+++.||++ .+. +..++ .. .|++ +|+ ++.+|.+++|+|.+|....
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i~---~~--~v~~----~g~--~~~~d~lviAtGs~p~~p~ 146 (463)
T 2r9z_A 85 AGRDRYIGAINSFWDGYVERLGITRVDGH-ARFVD---AH--TIEV----EGQ--RLSADHIVIATGGRPIVPR 146 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCEEEESC-EEEEE---TT--EEEE----TTE--EEEEEEEEECCCEEECCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEEeE-EEEcc---CC--EEEE----CCE--EEEcCEEEECCCCCCCCCC
Confidence 11122334456789999 764 33343 22 3554 455 7999999999999887654
No 235
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.45 E-value=0.00032 Score=73.83 Aligned_cols=96 Identities=16% Similarity=0.040 Sum_probs=65.1
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcC------C----------------------------ccC-------
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRL------L----------------------------KHF------- 279 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~------l----------------------------~~~------- 279 (535)
-+|+|||||+.|+.+|..|++.|.+|+++++ +.+ . ..+
T Consensus 4 ~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~~~ 83 (476)
T 3lad_A 4 FDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTGEV 83 (476)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECSCC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 3699999999999999999999999999998 511 0 000
Q ss_pred --c------------HHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCC
Q psy14461 280 --D------------QEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDF 344 (535)
Q Consensus 280 --~------------~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~ 344 (535)
+ ..+...+...+++.||++ .+.... +. .+.+.|.. .+|+..++.+|.+++|+|.+|..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~-~~---~~~~~v~~---~~g~~~~~~~d~lvlAtG~~p~~ 156 (476)
T 3lad_A 84 AIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKL-LA---GKKVEVTA---ADGSSQVLDTENVILASGSKPVE 156 (476)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEE-CS---TTCEEEEC---TTSCEEEECCSCEEECCCEEECC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-ec---CCEEEEEc---CCCceEEEEcCEEEEcCCCCCCC
Confidence 0 011122234456678888 665332 22 34455554 36655589999999999998864
No 236
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.44 E-value=3e-05 Score=81.48 Aligned_cols=88 Identities=10% Similarity=0.004 Sum_probs=66.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCC--CcEEEEEc-CcCC--------cc--CcHHHHHHHHHhhhcCCeEE-cceEEEE
Q psy14461 240 WPGKTLVLGGSLMAVEIAATLNFLG--VPVTLVYS-RRLL--------KH--FDQEMVRILLSSLTKAGVSI-QCCVIEK 305 (535)
Q Consensus 240 ~~k~vvViGgG~~g~e~A~~l~~~g--~~Vtlv~~-~~~l--------~~--~~~~~~~~~~~~l~~~gV~i-~~~~v~~ 305 (535)
.+++|+|||+|+.|+.+|..|++.| .+|+++++ +.+. |. ...++...+.+.+++.||++ .+..+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~- 83 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVG- 83 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCBT-
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEEe-
Confidence 4578999999999999999999998 89999998 6654 22 23456677778888899999 876551
Q ss_pred EEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCC
Q psy14461 306 VISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKF 342 (535)
Q Consensus 306 i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p 342 (535)
. .|++. +. .+.+|.||+|||..|
T Consensus 84 ------~--~V~~~---~~---~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 84 ------R--DVTVQ---EL---QDAYHAVVLSYGAED 106 (460)
T ss_dssp ------T--TBCHH---HH---HHHSSEEEECCCCCE
T ss_pred ------e--EEEec---cc---eEEcCEEEEecCcCC
Confidence 1 13331 22 368999999999885
No 237
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.43 E-value=0.00036 Score=73.70 Aligned_cols=92 Identities=17% Similarity=0.104 Sum_probs=64.7
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEcCcCCc------------------------------------cCc-----
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYSRRLLK------------------------------------HFD----- 280 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~l~------------------------------------~~~----- 280 (535)
.+|+|||||+.|+.+|..|+++|.+|++++++.+.. .++
T Consensus 27 ~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~ 106 (484)
T 3o0h_A 27 FDLFVIGSGSGGVRAARLAGALGKRVAIAEEYRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNWEKLV 106 (484)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHhCcCEEEEEeCCCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCHHHHH
Confidence 479999999999999999999999999999832110 000
Q ss_pred -------HHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCC
Q psy14461 281 -------QEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFD 343 (535)
Q Consensus 281 -------~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~ 343 (535)
..+...+...+++.+|++ .+ .+..++ .. .+.+. .+++ ++.+|.+++|+|.+|.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~i~---~~--~v~v~--~~~~--~~~~d~lviAtG~~p~ 167 (484)
T 3o0h_A 107 AAKNKEISRLEGLYREGLQNSNVHIYES-RAVFVD---EH--TLELS--VTGE--RISAEKILIATGAKIV 167 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEEEE---TT--EEEET--TTCC--EEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEee---CC--EEEEe--cCCe--EEEeCEEEEccCCCcc
Confidence 122333455667789999 65 444443 22 34442 1555 7999999999999887
No 238
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.41 E-value=0.00046 Score=72.93 Aligned_cols=97 Identities=14% Similarity=0.033 Sum_probs=64.5
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEEc-Cc--------CC-------------------------------------
Q psy14461 243 KTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RR--------LL------------------------------------- 276 (535)
Q Consensus 243 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~--------~l------------------------------------- 276 (535)
.|+|||+|+.|+.+|..|++.|.+|+++++ +. +-
T Consensus 8 DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~~~~ 87 (488)
T 3dgz_A 8 DLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEVAQP 87 (488)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCCCSS
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCcccCCc
Confidence 699999999999999999999999999984 11 00
Q ss_pred ccCc-HH-----------HHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCC
Q psy14461 277 KHFD-QE-----------MVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFD 343 (535)
Q Consensus 277 ~~~~-~~-----------~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~ 343 (535)
+..+ +. +...+...+++.+|++ .+. +..+. ...+.|.. .+|+..++.+|.+|+|||.+|.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~-~~~~~---~~~v~v~~---~~g~~~~~~~d~lViATGs~p~ 160 (488)
T 3dgz_A 88 VQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIK-ASFVD---EHTVRGVD---KGGKATLLSAEHIVIATGGRPR 160 (488)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCE-EEESS---SSEEEEEC---TTSCEEEEEEEEEEECCCEEEC
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEcc---CCeEEEEe---CCCceEEEECCEEEEcCCCCCC
Confidence 0011 01 1112333456678888 443 33332 23344443 3665568999999999999987
Q ss_pred CCC
Q psy14461 344 FAA 346 (535)
Q Consensus 344 ~~~ 346 (535)
...
T Consensus 161 ~p~ 163 (488)
T 3dgz_A 161 YPT 163 (488)
T ss_dssp CCS
T ss_pred CCC
Confidence 654
No 239
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.39 E-value=0.00073 Score=72.74 Aligned_cols=52 Identities=21% Similarity=0.146 Sum_probs=39.5
Q ss_pred HhhhcCCeEE-cceEEEEEEEeCCCcE-EEEEecCCCCCceEEEcCEEEEccCCC
Q psy14461 289 SSLTKAGVSI-QCCVIEKVISSFDGMK-GVRGFHPESKEPFADVFKTVVNAMEKK 341 (535)
Q Consensus 289 ~~l~~~gV~i-~~~~v~~i~~~~~~~~-~v~~~~~~~G~~~~~~~D~vi~a~G~~ 341 (535)
+.+++.|+++ .+++|+++..+ ++++ .|++.+..+|+..++.+|.||.|+|.-
T Consensus 178 ~~a~~~G~~i~~~~~V~~l~~~-~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~ 231 (561)
T 3da1_A 178 KEAVARGAVALNYMKVESFIYD-QGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPW 231 (561)
T ss_dssp HHHHHTTCEEEESEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCGGG
T ss_pred HHHHHcCCEEEcCCEEEEEEEc-CCeEEEEEEEEcCCCceEEEECCEEEECCCcc
Confidence 3456689999 99999999886 4554 476654345665689999999999964
No 240
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=97.39 E-value=0.00018 Score=61.54 Aligned_cols=66 Identities=12% Similarity=0.184 Sum_probs=50.3
Q ss_pred ChhHHHHhhhcCCcEEEEeCCCchhhHHHH-HHHHHhcC---CcceEEEEEeeCCccHHHHHHHHHhhCCCe
Q psy14461 46 TPPAYISRLSYENRILIFTHAVLREENARA-ERYLNARG---DRFAVLYLDRIGDEGILLEEELKRQTNQRR 113 (535)
Q Consensus 46 ~l~~~~~~~i~~~~v~v~~k~~cp~~~~~~-k~~~~~~~---~~~~~~~v~iiG~G~aG~~~al~~~~~~~~ 113 (535)
.....+..++..++|++|++++|| +|.++ +.++.+.+ .++.+++|+....|.. +...+....+..+
T Consensus 25 ~~~~~v~~~i~~~~Vvvy~~~~Cp-~C~~a~k~~L~~~~~~~i~~~~vdvd~~~~~~~-~~~~L~~~~g~~t 94 (129)
T 3ctg_A 25 ETVAHVKDLIGQKEVFVAAKTYCP-YCKATLSTLFQELNVPKSKALVLELDEMSNGSE-IQDALEEISGQKT 94 (129)
T ss_dssp HHHHHHHHHHHHSSEEEEECTTCH-HHHHHHHHHHTTSCCCGGGEEEEEGGGSTTHHH-HHHHHHHHHSCCS
T ss_pred HHHHHHHHHHcCCCEEEEECCCCC-chHHHHHHHHHhcCccCCCcEEEEccccCCHHH-HHHHHHHHhCCCC
Confidence 357778888999999999999999 99999 99999998 7776666655544333 6666766555433
No 241
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.39 E-value=0.00047 Score=72.06 Aligned_cols=94 Identities=13% Similarity=0.126 Sum_probs=64.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEcCcCCcc-------------------------------------Cc-H--
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYSRRLLKH-------------------------------------FD-Q-- 281 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~l~~-------------------------------------~~-~-- 281 (535)
.+|+|||||+.|+.+|..|++.|.+|+++++..+... .+ +
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~~~~~l 84 (450)
T 1ges_A 5 YDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWETL 84 (450)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEECHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCCCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCccCHHHH
Confidence 4799999999999999999999999999998321100 00 0
Q ss_pred ---------HHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCCCCCC
Q psy14461 282 ---------EMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAAL 347 (535)
Q Consensus 282 ---------~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l 347 (535)
.+...+...+++.||++ .+.. ..++ .. .|.+ +|+ ++.+|.+++|+|.+|....+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~-~~i~---~~--~v~~----~g~--~~~~d~lviAtGs~p~~p~i 148 (450)
T 1ges_A 85 IASRTAYIDRIHTSYENVLGKNNVDVIKGFA-RFVD---AK--TLEV----NGE--TITADHILIATGGRPSHPDI 148 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEESCC-EEEE---TT--EEEE----TTE--EEEEEEEEECCCEEECCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEeEE-EEec---CC--EEEE----CCE--EEEeCEEEECCCCCCCCCCC
Confidence 11122234456789999 6643 3443 22 3444 455 79999999999998876543
No 242
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.38 E-value=0.00051 Score=72.69 Aligned_cols=99 Identities=9% Similarity=-0.089 Sum_probs=65.3
Q ss_pred CcEEEECCChHHHHHHHHHHh-CCCcEEEEE---------cCcCCc----------------------------------
Q psy14461 242 GKTLVLGGSLMAVEIAATLNF-LGVPVTLVY---------SRRLLK---------------------------------- 277 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~-~g~~Vtlv~---------~~~~l~---------------------------------- 277 (535)
.+|+|||||+.|+.+|..|++ .|.+|++++ ++.+..
T Consensus 4 ~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~ 83 (490)
T 1fec_A 4 YDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWELD 83 (490)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEECC
T ss_pred ccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCcccC
Confidence 369999999999999999999 999999999 332210
Q ss_pred ----cCc-HH-----------HHHHHHHhhhcC-CeEE-cceEEEEEEEeCCCcEEEEEecC--CCCC-ceEEEcCEEEE
Q psy14461 278 ----HFD-QE-----------MVRILLSSLTKA-GVSI-QCCVIEKVISSFDGMKGVRGFHP--ESKE-PFADVFKTVVN 336 (535)
Q Consensus 278 ----~~~-~~-----------~~~~~~~~l~~~-gV~i-~~~~v~~i~~~~~~~~~v~~~~~--~~G~-~~~~~~D~vi~ 336 (535)
.++ +. +...+.+.+++. ||++ .+. +..++ .. .+.+... .+|+ ..++.+|.+++
T Consensus 84 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~-~~~i~---~~--~v~v~~~~~~~g~~~~~~~~d~lvi 157 (490)
T 1fec_A 84 RESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGF-GALQD---NH--TVLVRESADPNSAVLETLDTEYILL 157 (490)
T ss_dssp GGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESE-EEEEE---TT--EEEEESSSSTTSCEEEEEEEEEEEE
T ss_pred CcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeE-EEEee---CC--EEEEEeeccCCCCceEEEEcCEEEE
Confidence 001 01 112233455677 9999 775 55554 23 3444210 1451 13799999999
Q ss_pred ccCCCCCCCC
Q psy14461 337 AMEKKFDFAA 346 (535)
Q Consensus 337 a~G~~p~~~~ 346 (535)
|||.+|....
T Consensus 158 AtGs~p~~p~ 167 (490)
T 1fec_A 158 ATGSWPQHLG 167 (490)
T ss_dssp CCCEEECCCC
T ss_pred eCCCCCCCCC
Confidence 9999987654
No 243
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.37 E-value=0.00072 Score=70.72 Aligned_cols=93 Identities=16% Similarity=0.094 Sum_probs=64.3
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRFC 168 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 168 (535)
.+++|||+|..|+..|......+.+|+|+|+.+.+ +|.. + ..+.+
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~------l~~~----------------------~-~~~~~------ 212 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRI------LPTM----------------------D-LEVSR------ 212 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS------CTTS----------------------C-HHHHH------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcc------cccc----------------------C-HHHHH------
Confidence 46899999999999998777788999999998754 1211 1 01111
Q ss_pred HHHHHHHHHHHHhcCcEEEEeE-EEEe--cCCEEEE--c-eeEEEcceEEEeeCceecC
Q psy14461 169 IRAKNDSMRELKALGIDIVRTA-AAFT--NPHTIKL--S-NRSVTGFNFLLAVERRCLP 221 (535)
Q Consensus 169 ~~~~~~~~~~~~~~gV~~~~g~-~~~~--~~~~v~~--~-~~~~~~d~lViATGs~p~~ 221 (535)
.+.+.+++.||+++.++ +..+ +...+.+ . +.++.+|.||+|||.+|..
T Consensus 213 -----~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 213 -----AAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp -----HHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred -----HHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCC
Confidence 12355667799998763 3332 2333433 2 3679999999999999987
No 244
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.35 E-value=0.00056 Score=69.21 Aligned_cols=33 Identities=15% Similarity=0.169 Sum_probs=29.9
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-Cc
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RR 274 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~ 274 (535)
.++|+|||||.+|+-+|..|+ .|.+|+|+++ +.
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~ 42 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQ 42 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCC
Confidence 478999999999999999999 5999999998 53
No 245
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.35 E-value=0.00064 Score=70.03 Aligned_cols=35 Identities=9% Similarity=-0.084 Sum_probs=32.0
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHL 123 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~ 123 (535)
++|+|||+|++|+.+|+.+...+.+|+|+|+.+..
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~ 40 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFP 40 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 68999999999999999988889999999998743
No 246
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.35 E-value=0.00045 Score=73.18 Aligned_cols=30 Identities=20% Similarity=0.148 Sum_probs=28.8
Q ss_pred CcEEEECCChHHHHHHHHHHh-CCCcEEEEE
Q psy14461 242 GKTLVLGGSLMAVEIAATLNF-LGVPVTLVY 271 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~-~g~~Vtlv~ 271 (535)
.+|+|||||+.|+.+|..|++ .|.+|++++
T Consensus 8 ~dvvVIGgG~aGl~aA~~la~~~G~~V~liE 38 (495)
T 2wpf_A 8 FDLVVIGAGSGGLEAGWNAATLYGKRVAVVD 38 (495)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCEEEEE
T ss_pred cCEEEECCChhHHHHHHHHHHhcCCeEEEEe
Confidence 479999999999999999999 999999999
No 247
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=97.34 E-value=0.0014 Score=68.05 Aligned_cols=31 Identities=23% Similarity=0.263 Sum_probs=29.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCCC-cEEEEEc
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGV-PVTLVYS 272 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~-~Vtlv~~ 272 (535)
.+|+|||||..|+-+|..|++.|. +|+|+++
T Consensus 7 ~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~ 38 (438)
T 3dje_A 7 SSLLIVGAGTWGTSTALHLARRGYTNVTVLDP 38 (438)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCCEEEEES
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCCcEEEEeC
Confidence 479999999999999999999999 9999987
No 248
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.33 E-value=0.00088 Score=76.77 Aligned_cols=103 Identities=15% Similarity=0.048 Sum_probs=70.4
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCc---c-----C----cHHHHHHHHHhhhc-CCeEE-cceEEEEE
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLK---H-----F----DQEMVRILLSSLTK-AGVSI-QCCVIEKV 306 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~---~-----~----~~~~~~~~~~~l~~-~gV~i-~~~~v~~i 306 (535)
.+|+|||+|+.|+.+|..|++.|.+|+|+++ +.+.. . + ..++...+.+.+.+ .+|++ .++++..+
T Consensus 129 ~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~i 208 (965)
T 2gag_A 129 TDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTVFGS 208 (965)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEEEee
Confidence 5799999999999999999999999999998 55421 1 1 23444455555655 49999 99999988
Q ss_pred EEeCCCcEE-EEEec-----C-C----CCCceEEEcCEEEEccCCCCCCCC
Q psy14461 307 ISSFDGMKG-VRGFH-----P-E----SKEPFADVFKTVVNAMEKKFDFAA 346 (535)
Q Consensus 307 ~~~~~~~~~-v~~~~-----~-~----~G~~~~~~~D~vi~a~G~~p~~~~ 346 (535)
... +... +.... . . +++..++.+|.+|+|||..|....
T Consensus 209 ~~~--~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~ 257 (965)
T 2gag_A 209 YDA--NYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIV 257 (965)
T ss_dssp ETT--TEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCC
T ss_pred ecC--CceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCCC
Confidence 642 2221 11100 0 0 122236899999999999876543
No 249
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.33 E-value=0.0012 Score=69.71 Aligned_cols=30 Identities=20% Similarity=0.235 Sum_probs=28.8
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEE
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVY 271 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~ 271 (535)
-+|+|||||+.|+.+|..|++.|.+|++++
T Consensus 10 ~DvvVIGgG~aGl~aA~~la~~G~~V~liE 39 (483)
T 3dgh_A 10 YDLIVIGGGSAGLACAKEAVLNGARVACLD 39 (483)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCEEEEEE
Confidence 479999999999999999999999999998
No 250
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.33 E-value=0.00047 Score=70.61 Aligned_cols=36 Identities=8% Similarity=-0.256 Sum_probs=32.5
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHL 123 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~ 123 (535)
.++|+|||+|++|+.+|+.+...+.+|+|+|+.+..
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~ 41 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRE 41 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 368999999999999999998889999999998754
No 251
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.33 E-value=0.00072 Score=70.84 Aligned_cols=93 Identities=19% Similarity=0.095 Sum_probs=64.7
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRFC 168 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 168 (535)
.+++|||+|..|+..|......+.+|+|+++.+.+ ++.. +. ++.+
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~------l~~~----------------------~~-~~~~------ 216 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERI------LPTY----------------------DS-ELTA------ 216 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS------STTS----------------------CH-HHHH------
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcc------cccc----------------------CH-HHHH------
Confidence 46899999999999998777778899999998754 1211 10 1111
Q ss_pred HHHHHHHHHHHHhcCcEEEEeE-EEEecCCEEEEc---e--eEEEcceEEEeeCceecC
Q psy14461 169 IRAKNDSMRELKALGIDIVRTA-AAFTNPHTIKLS---N--RSVTGFNFLLAVERRCLP 221 (535)
Q Consensus 169 ~~~~~~~~~~~~~~gV~~~~g~-~~~~~~~~v~~~---~--~~~~~d~lViATGs~p~~ 221 (535)
.+.+.+++.||+++.++ +..++...+.+. + .++.+|.||+|||.+|..
T Consensus 217 -----~l~~~l~~~gv~i~~~~~v~~i~~~~v~v~~~~G~~~~i~~D~vv~a~G~~p~~ 270 (458)
T 1lvl_A 217 -----PVAESLKKLGIALHLGHSVEGYENGCLLANDGKGGQLRLEADRVLVAVGRRPRT 270 (458)
T ss_dssp -----HHHHHHHHHTCEEETTCEEEEEETTEEEEECSSSCCCEECCSCEEECCCEEECC
T ss_pred -----HHHHHHHHCCCEEEECCEEEEEEeCCEEEEECCCceEEEECCEEEECcCCCcCC
Confidence 12355677899998763 333332335443 3 579999999999999987
No 252
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.32 E-value=0.00028 Score=74.08 Aligned_cols=95 Identities=21% Similarity=0.180 Sum_probs=64.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEcCcCCc------------------------------------cCc-----
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYSRRLLK------------------------------------HFD----- 280 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~l~------------------------------------~~~----- 280 (535)
-+|+|||||+.|+.+|..|++.|.+|++++++.+.. .++
T Consensus 6 ~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 85 (463)
T 4dna_A 6 YDLFVIGGGSGGVRSGRLAAALGKKVAIAEEFRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDWAKLV 85 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECHHHHH
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCHHHHH
Confidence 369999999999999999999999999999732110 001
Q ss_pred -------HHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCC-CCC
Q psy14461 281 -------QEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFD-FAA 346 (535)
Q Consensus 281 -------~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~-~~~ 346 (535)
..+...+.+.+++.||++ .+ .+..++ . ..+.+. .+++ ++.+|.+++|+|.+|. ...
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~---~--~~v~~~--~~~~--~~~~d~lviAtG~~p~~~p~ 150 (463)
T 4dna_A 86 AAKEQEIARLEGLYRKGLANAGAEILDT-RAELAG---P--NTVKLL--ASGK--TVTAERIVIAVGGHPSPHDA 150 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCEEEES-CEEESS---S--SEEEET--TTTE--EEEEEEEEECCCEEECCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEee---C--CEEEEe--cCCe--EEEeCEEEEecCCCcccCCC
Confidence 122233445566678988 66 333332 1 244442 2455 7999999999999887 543
No 253
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.31 E-value=7.4e-05 Score=78.37 Aligned_cols=89 Identities=12% Similarity=0.069 Sum_probs=66.5
Q ss_pred CCcEEEECCChHHHHHHHHHHh-C------CCcEEEEEc-CcCCc----------cCcHHHHHHHHHhhhcCCeEE-cce
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNF-L------GVPVTLVYS-RRLLK----------HFDQEMVRILLSSLTKAGVSI-QCC 301 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~-~------g~~Vtlv~~-~~~l~----------~~~~~~~~~~~~~l~~~gV~i-~~~ 301 (535)
+++|+|||||+.|+.+|..|++ . |.+|+++++ +.+.. ....++...+.+.+++.||++ .+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~v 82 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNV 82 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEESC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCCEEEeeE
Confidence 4689999999999999999999 7 999999999 66532 123456677778888889999 775
Q ss_pred EEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCC-CCC
Q psy14461 302 VIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKK-FDF 344 (535)
Q Consensus 302 ~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~-p~~ 344 (535)
.+ +.. |++. ++ ++.+|.||+|+|.. |..
T Consensus 83 ~v-------~~~--v~~~---~~---~~~~d~lViAtG~~~~~~ 111 (456)
T 1lqt_A 83 VV-------GEH--VQPG---EL---SERYDAVIYAVGAQSDRM 111 (456)
T ss_dssp CB-------TTT--BCHH---HH---HHHSSEEEECCCCCEECC
T ss_pred EE-------CCE--EEEC---CC---eEeCCEEEEeeCCCCCCC
Confidence 42 121 3332 34 37899999999996 443
No 254
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.30 E-value=0.00024 Score=78.27 Aligned_cols=86 Identities=15% Similarity=0.095 Sum_probs=63.4
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCC---------ccC--cHHHHHHHHHhhhcCCeEE-cceEEEEEE
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLL---------KHF--DQEMVRILLSSLTKAGVSI-QCCVIEKVI 307 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l---------~~~--~~~~~~~~~~~l~~~gV~i-~~~~v~~i~ 307 (535)
.++|+|||||+.|+.+|..|++.|.+|+|+++ +.+. +.. ..+....+.+.+++.||++ .++.++
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~--- 449 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVT--- 449 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCC---
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEec---
Confidence 46899999999999999999999999999998 6542 111 1234445666677788888 765331
Q ss_pred EeCCCcEEEEEecCCCCCceEE-EcCEEEEccCCCCCCCCC
Q psy14461 308 SSFDGMKGVRGFHPESKEPFAD-VFKTVVNAMEKKFDFAAL 347 (535)
Q Consensus 308 ~~~~~~~~v~~~~~~~G~~~~~-~~D~vi~a~G~~p~~~~l 347 (535)
.. .+ .+|.+++|||.+|....+
T Consensus 450 ----------------~~--~~~~~d~lviAtG~~p~~~~i 472 (671)
T 1ps9_A 450 ----------------AD--QLQAFDETILASGIVPRTPPI 472 (671)
T ss_dssp ----------------SS--SSCCSSEEEECCCEEECCCCC
T ss_pred ----------------HH--HhhcCCEEEEccCCCcCCCCC
Confidence 01 23 799999999999876543
No 255
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=97.29 E-value=0.00089 Score=70.70 Aligned_cols=47 Identities=9% Similarity=0.039 Sum_probs=35.6
Q ss_pred hhhcCCeEE-cceEEEEEEEeCCCcEE-EEEecCCCCCceEEEcCEEEEccCCCC
Q psy14461 290 SLTKAGVSI-QCCVIEKVISSFDGMKG-VRGFHPESKEPFADVFKTVVNAMEKKF 342 (535)
Q Consensus 290 ~l~~~gV~i-~~~~v~~i~~~~~~~~~-v~~~~~~~G~~~~~~~D~vi~a~G~~p 342 (535)
.+++.|++| +++.|++|..+ +++++ |++ .+|+ ++.+|.||.+++...
T Consensus 230 ~~~~~Gg~I~~~~~V~~I~~~-~~~~~gV~~---~~g~--~~~ad~VV~~a~~~~ 278 (501)
T 4dgk_A 230 LFQDLGGEVVLNARVSHMETT-GNKIEAVHL---EDGR--RFLTQAVASNADVVH 278 (501)
T ss_dssp HHHHTTCEEECSCCEEEEEEE-TTEEEEEEE---TTSC--EEECSCEEECCC---
T ss_pred HHHHhCCceeeecceeEEEee-CCeEEEEEe---cCCc--EEEcCEEEECCCHHH
Confidence 345678999 99999999887 56654 676 4788 899999999876543
No 256
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.29 E-value=0.00034 Score=57.85 Aligned_cols=70 Identities=19% Similarity=0.221 Sum_probs=49.6
Q ss_pred hhHHHHhhhcCCcEEEEeC-----CCchhhHHHHHHHHHhcCCcceEEEEEeeCCccHHHHHHHHHhhCCCeE-EEEecC
Q psy14461 47 PPAYISRLSYENRILIFTH-----AVLREENARAERYLNARGDRFAVLYLDRIGDEGILLEEELKRQTNQRRD-ELQERG 120 (535)
Q Consensus 47 l~~~~~~~i~~~~v~v~~k-----~~cp~~~~~~k~~~~~~~~~~~~~~v~iiG~G~aG~~~al~~~~~~~~V-~lie~~ 120 (535)
+...+..++.+++|++|++ ++|| +|.+++.++.+.+.++..++|. -. +. +...+....+..+| +|+-.+
T Consensus 4 ~~~~~~~~i~~~~vvvy~~g~~~~~~Cp-~C~~ak~~L~~~~i~~~~vdi~--~~-~~-~~~~l~~~~g~~~vP~ifi~g 78 (109)
T 1wik_A 4 GSSGLKVLTNKASVMLFMKGNKQEAKCG-FSKQILEILNSTGVEYETFDIL--ED-EE-VRQGLKTFSNWPTYPQLYVRG 78 (109)
T ss_dssp SCCCHHHHHTTSSEEEEESSTTTCCCSS-THHHHHHHHHHTCSCEEEEESS--SC-HH-HHHHHHHHHSCCSSCEEECSS
T ss_pred HHHHHHHHhccCCEEEEEecCCCCCCCc-hHHHHHHHHHHcCCCeEEEECC--CC-HH-HHHHHHHHhCCCCCCEEEECC
Confidence 4455677888999999999 9999 9999999999999876555443 22 43 66667665555444 444333
Q ss_pred C
Q psy14461 121 S 121 (535)
Q Consensus 121 ~ 121 (535)
.
T Consensus 79 ~ 79 (109)
T 1wik_A 79 D 79 (109)
T ss_dssp S
T ss_pred E
Confidence 3
No 257
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.27 E-value=0.0015 Score=72.15 Aligned_cols=35 Identities=23% Similarity=0.301 Sum_probs=31.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcC
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRL 275 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~ 275 (535)
..+|+|||||.+|+-+|..|++.|.+|+|+++ +.+
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~ 299 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQP 299 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSST
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCcc
Confidence 36899999999999999999999999999998 533
No 258
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=97.27 E-value=0.00098 Score=66.92 Aligned_cols=34 Identities=12% Similarity=-0.065 Sum_probs=31.6
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSH 122 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~ 122 (535)
++|+|||+|.+|+.+|+.+...+.+|+|+|+++.
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEG 38 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 6899999999999999999889999999999863
No 259
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.26 E-value=0.0019 Score=69.04 Aligned_cols=32 Identities=22% Similarity=0.199 Sum_probs=30.1
Q ss_pred CCcEEEECCChHHHHHHHHHHh---CCCcEEEEEc
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNF---LGVPVTLVYS 272 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~---~g~~Vtlv~~ 272 (535)
..+|+|||||.+|+-+|..|++ .|.+|+|+++
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~ 39 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIES 39 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECC
Confidence 3589999999999999999999 9999999997
No 260
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.26 E-value=0.00072 Score=73.34 Aligned_cols=32 Identities=13% Similarity=0.146 Sum_probs=30.1
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
..+|+|||||+.|+.+|..|+++|.+|+++++
T Consensus 107 ~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~ 138 (598)
T 2x8g_A 107 DYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDY 138 (598)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred cccEEEECCCccHHHHHHHHHhCCCeEEEEec
Confidence 45899999999999999999999999999985
No 261
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.26 E-value=0.0027 Score=63.51 Aligned_cols=162 Identities=14% Similarity=0.154 Sum_probs=95.8
Q ss_pred CcEEEECCChHHHHHHHHHHhC--CCcEEEEEc-CcCCc--------------------------------------cCc
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFL--GVPVTLVYS-RRLLK--------------------------------------HFD 280 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~--g~~Vtlv~~-~~~l~--------------------------------------~~~ 280 (535)
-+|+|||||+.|+.+|..|+++ |.+|+|+++ +.+.. ...
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~~ 159 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKHA 159 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEecH
Confidence 4799999999999999999997 999999998 53310 001
Q ss_pred HHHHHHHHHhhhc-CCeEE-cceEEEEEEEeCC----------------C--cE-EEEEec---CCCC------CceEEE
Q psy14461 281 QEMVRILLSSLTK-AGVSI-QCCVIEKVISSFD----------------G--MK-GVRGFH---PESK------EPFADV 330 (535)
Q Consensus 281 ~~~~~~~~~~l~~-~gV~i-~~~~v~~i~~~~~----------------~--~~-~v~~~~---~~~G------~~~~~~ 330 (535)
.++.+.+.+.+.+ .|+++ .++.++++..+++ + ++ -|.... ..+| +..++.
T Consensus 160 ~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~ 239 (344)
T 3jsk_A 160 ALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTIN 239 (344)
T ss_dssp HHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEE
Confidence 3344555666666 59999 9999999876521 2 22 133311 0122 335899
Q ss_pred cCEEEEccCCCCCCCCCC---ccccCeeecCCCc--eEcC-------CCCCcCCCCEEEeCCcCC---CC----CCcHHH
Q psy14461 331 FKTVVNAMEKKFDFAALN---LHHIGVDIKKKSY--VVCN-------EKDQTSVGNIFAVGGIVH---GK----PNNASM 391 (535)
Q Consensus 331 ~D~vi~a~G~~p~~~~l~---l~~~gl~~~~~G~--i~vd-------~~~~T~~~~IyA~GD~~~---~~----~~~~~~ 391 (535)
++.||.|+|........- +...++...-.|. ..++ ++.+--+|++|++|=.++ |. |.+..
T Consensus 240 Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~~v~~gl~~~gm~~~~~~g~~rmgp~fg~- 318 (344)
T 3jsk_A 240 APVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNTREIVPGLIVGGMELSEIDGANRMGPTFGA- 318 (344)
T ss_dssp CSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTCEEEETTEEECGGGHHHHHTCEECCSCCHH-
T ss_pred cCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhhcccCceEcCCEEEechhhHhhcCCCCCCcccce-
Confidence 999999999876532110 0111221000111 1111 011113699999997665 32 33332
Q ss_pred HHHHHHHHHHHHh
Q psy14461 392 AAISARLIIERLY 404 (535)
Q Consensus 392 A~~~g~~aa~~i~ 404 (535)
=...|+.||+-|+
T Consensus 319 m~~sg~~~a~~~~ 331 (344)
T 3jsk_A 319 MALSGVKAAHEAI 331 (344)
T ss_dssp HHHHHHHHHHHHH
T ss_pred eeecCHHHHHHHH
Confidence 2456777777765
No 262
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.24 E-value=0.0012 Score=72.28 Aligned_cols=100 Identities=11% Similarity=0.011 Sum_probs=73.2
Q ss_pred CcEEEECCChHHHHHHHHHHh-CCCcEEEEEc-CcCCcc-----------------------------------------
Q psy14461 242 GKTLVLGGSLMAVEIAATLNF-LGVPVTLVYS-RRLLKH----------------------------------------- 278 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~-~g~~Vtlv~~-~~~l~~----------------------------------------- 278 (535)
-+|+|||||++|+-+|..|++ .|.+|+|+++ +.+...
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 112 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPDPG 112 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEECTT
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCCCC
Confidence 369999999999999999999 9999999987 432100
Q ss_pred -------------------------Cc-HHHHHHHHHhhhcCCe--EE-cceEEEEEEEeCC---CcEEEEEecC---CC
Q psy14461 279 -------------------------FD-QEMVRILLSSLTKAGV--SI-QCCVIEKVISSFD---GMKGVRGFHP---ES 323 (535)
Q Consensus 279 -------------------------~~-~~~~~~~~~~l~~~gV--~i-~~~~v~~i~~~~~---~~~~v~~~~~---~~ 323 (535)
.+ ..+.+.+.+.+++.|+ ++ .++++++++.+++ ..+.|++++. .+
T Consensus 113 ~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~ 192 (639)
T 2dkh_A 113 QPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHA 192 (639)
T ss_dssp STTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGT
T ss_pred CCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCC
Confidence 00 2344556666777776 99 9999999987632 2477777520 14
Q ss_pred CCceEEEcCEEEEccCCC
Q psy14461 324 KEPFADVFKTVVNAMEKK 341 (535)
Q Consensus 324 G~~~~~~~D~vi~a~G~~ 341 (535)
|+..++.+|.||.|.|..
T Consensus 193 G~~~~i~a~~vVgADG~~ 210 (639)
T 2dkh_A 193 GQIETVQARYVVGCDGAR 210 (639)
T ss_dssp TCEEEEEEEEEEECCCTT
T ss_pred CCeEEEEeCEEEECCCcc
Confidence 655589999999999964
No 263
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.23 E-value=0.00012 Score=84.59 Aligned_cols=91 Identities=14% Similarity=0.165 Sum_probs=67.9
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCC-cEEEEEc-CcCC-------c--cCcHHHHHHHHHhhhcCCeEE-cceEEEEEEE
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGV-PVTLVYS-RRLL-------K--HFDQEMVRILLSSLTKAGVSI-QCCVIEKVIS 308 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~-~Vtlv~~-~~~l-------~--~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~ 308 (535)
.++|+|||||+.|+.+|..|++.|. +|+++++ +.+. | .++.++.+...+.+++.||++ .++.+..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~--- 263 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSE--- 263 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTTTCEEEESCCBST---
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHCCcEEEcccEecc---
Confidence 4789999999999999999999998 7999999 6542 1 234556666677888899999 8876521
Q ss_pred eCCCcEEEEEecCCCCCceEEEcCEEEEccCC-CCCC
Q psy14461 309 SFDGMKGVRGFHPESKEPFADVFKTVVNAMEK-KFDF 344 (535)
Q Consensus 309 ~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~-~p~~ 344 (535)
. .+++. +++ ++.+|.|++|||. +|..
T Consensus 264 ---~--~v~~~---~~~--~~~~d~vvlAtGa~~p~~ 290 (1025)
T 1gte_A 264 ---N--EITLN---TLK--EEGYKAAFIGIGLPEPKT 290 (1025)
T ss_dssp ---T--SBCHH---HHH--HTTCCEEEECCCCCEECC
T ss_pred ---c--eEEhh---hcC--ccCCCEEEEecCCCCCCC
Confidence 1 12232 333 4689999999998 5764
No 264
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.23 E-value=0.0011 Score=69.47 Aligned_cols=93 Identities=19% Similarity=0.056 Sum_probs=64.4
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRFC 168 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 168 (535)
.+++|||+|..|+..|......+.+|+|+|+.+.+ ++.. +. ++.
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~------l~~~----------------------~~-~~~------- 213 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEI------LPQG----------------------DP-ETA------- 213 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS------STTS----------------------CH-HHH-------
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcc------cccc----------------------CH-HHH-------
Confidence 46799999999999998777788999999998754 1111 10 111
Q ss_pred HHHHHHHHHHHHhcCcEEEEeE-EEEe--cCC--EEEEc----ee--EEEcceEEEeeCceecC
Q psy14461 169 IRAKNDSMRELKALGIDIVRTA-AAFT--NPH--TIKLS----NR--SVTGFNFLLAVERRCLP 221 (535)
Q Consensus 169 ~~~~~~~~~~~~~~gV~~~~g~-~~~~--~~~--~v~~~----~~--~~~~d~lViATGs~p~~ 221 (535)
..+.+.+++.||+++.++ +..+ +.. .+.+. +. ++.+|.||+|+|.+|..
T Consensus 214 ----~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~ 273 (464)
T 2eq6_A 214 ----ALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRT 273 (464)
T ss_dssp ----HHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEESC
T ss_pred ----HHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccCC
Confidence 122356777899999874 3332 222 34443 33 79999999999999987
No 265
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=97.21 E-value=0.00043 Score=59.63 Aligned_cols=65 Identities=28% Similarity=0.250 Sum_probs=50.7
Q ss_pred CChhHHHHhhhcCCcEEEEeC-----CCchhhHHHHHHHHHhcCCcceEEEEEeeCCccHHHHHHHHHhhCCCeE
Q psy14461 45 ETPPAYISRLSYENRILIFTH-----AVLREENARAERYLNARGDRFAVLYLDRIGDEGILLEEELKRQTNQRRD 114 (535)
Q Consensus 45 ~~l~~~~~~~i~~~~v~v~~k-----~~cp~~~~~~k~~~~~~~~~~~~~~v~iiG~G~aG~~~al~~~~~~~~V 114 (535)
+++...+..++..++|++|++ .+|| +|.++++++.+.+.++..++|. -. +. +...+....+..+|
T Consensus 22 ~~~~~~v~~~i~~~~Vvvy~ks~~~~~~Cp-~C~~ak~~L~~~gv~y~~vdI~--~d-~~-~~~~L~~~~G~~tv 91 (135)
T 2wci_A 22 STTIEKIQRQIAENPILLYMKGSPKLPSCG-FSAQAVQALAACGERFAYVDIL--QN-PD-IRAELPKYANWPTF 91 (135)
T ss_dssp CHHHHHHHHHHHHCSEEEEESBCSSSBSSH-HHHHHHHHHHTTCSCCEEEEGG--GC-HH-HHHHHHHHHTCCSS
T ss_pred HHHHHHHHHHhccCCEEEEEEecCCCCCCc-cHHHHHHHHHHcCCceEEEECC--CC-HH-HHHHHHHHHCCCCc
Confidence 356888999999999999999 8999 9999999999999887655543 23 44 67777766555444
No 266
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.21 E-value=0.00052 Score=54.86 Aligned_cols=34 Identities=15% Similarity=0.109 Sum_probs=29.2
Q ss_pred CCcEEEEeCCCchhhHHHHHHHHHhcCCcceEEEE
Q psy14461 57 ENRILIFTHAVLREENARAERYLNARGDRFAVLYL 91 (535)
Q Consensus 57 ~~~v~v~~k~~cp~~~~~~k~~~~~~~~~~~~~~v 91 (535)
+.+|.+|++++|| ||.++|+++.+.|.+++.++|
T Consensus 3 ta~I~vYs~~~Cp-~C~~aK~~L~~~gi~y~~idi 36 (92)
T 2lqo_A 3 TAALTIYTTSWCG-YCLRLKTALTANRIAYDEVDI 36 (92)
T ss_dssp SSCEEEEECTTCS-SHHHHHHHHHHTTCCCEEEET
T ss_pred CCcEEEEcCCCCH-hHHHHHHHHHhcCCceEEEEc
Confidence 3469999999999 999999999999988765553
No 267
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.21 E-value=0.0036 Score=62.18 Aligned_cols=161 Identities=16% Similarity=0.227 Sum_probs=94.9
Q ss_pred CcEEEECCChHHHHHHHHHHhC--CCcEEEEEc-CcCCcc--------------------------------------Cc
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFL--GVPVTLVYS-RRLLKH--------------------------------------FD 280 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~--g~~Vtlv~~-~~~l~~--------------------------------------~~ 280 (535)
-+|+|||+|+.|+.+|..|++. |.+|+++++ +.+... ..
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~~ 145 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHA 145 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESCH
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcch
Confidence 3799999999999999999998 999999998 543200 01
Q ss_pred HHHHHHHHHhhhc-CCeEE-cceEEEEEEEeC--C-C--cEE-EEEec---CCCC------CceEEEc------------
Q psy14461 281 QEMVRILLSSLTK-AGVSI-QCCVIEKVISSF--D-G--MKG-VRGFH---PESK------EPFADVF------------ 331 (535)
Q Consensus 281 ~~~~~~~~~~l~~-~gV~i-~~~~v~~i~~~~--~-~--~~~-v~~~~---~~~G------~~~~~~~------------ 331 (535)
.++...+.+.+.+ .||++ .++.++++..++ + + ++. |.+.. ..+| ...++.+
T Consensus 146 ~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~ 225 (326)
T 2gjc_A 146 ALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLS 225 (326)
T ss_dssp HHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSS
T ss_pred HHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeecccccccccc
Confidence 3344555665666 49999 999999997652 2 2 332 33321 0122 3347999
Q ss_pred ---CEEEEccCCCCCCCCCCccccCeeecCCCceE----cC---------CCCCc--CCCCEEEeCCcCC---C----CC
Q psy14461 332 ---KTVVNAMEKKFDFAALNLHHIGVDIKKKSYVV----CN---------EKDQT--SVGNIFAVGGIVH---G----KP 386 (535)
Q Consensus 332 ---D~vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~----vd---------~~~~T--~~~~IyA~GD~~~---~----~~ 386 (535)
|.||.|+|.......+-.... ..++..+.+. .| +..+- -+|++|++|-... + +|
T Consensus 226 ~~~~~VV~ATG~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~g~ 304 (326)
T 2gjc_A 226 QKHGVILSTTGHDGPFGAFCAKRI-VDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELDGLNRMGP 304 (326)
T ss_dssp TTCCEEEECCCCC--CCSHHHHHH-HHHHSSCCCCCCCCBCHHHHHHHHHHHCEECTTSTTEEECTHHHHHHHTCCBCCS
T ss_pred ccCCEEEECcCCCchHHHHHHhhc-cccccccccCceeccccccchhheeecCCCccccCCEEECChHHHHhcCCCCCCh
Confidence 999999998765432200111 0111111111 01 01111 5799999998764 2 23
Q ss_pred CcHHHHHHHHHHHHHHHh
Q psy14461 387 NNASMAAISARLIIERLY 404 (535)
Q Consensus 387 ~~~~~A~~~g~~aa~~i~ 404 (535)
.+.. -.-.|+.||+.|+
T Consensus 305 ~fg~-m~~sg~~~a~~~~ 321 (326)
T 2gjc_A 305 TFGA-MALSGVHAAEQIL 321 (326)
T ss_dssp CCHH-HHHHHHHHHHHHH
T ss_pred hhhh-hhhhhHHHHHHHH
Confidence 3332 2446777877765
No 268
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.21 E-value=0.0019 Score=70.03 Aligned_cols=98 Identities=11% Similarity=0.096 Sum_probs=69.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCC--CcEEEEEc-CcCCc-----------cC---------------------c------
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLG--VPVTLVYS-RRLLK-----------HF---------------------D------ 280 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g--~~Vtlv~~-~~~l~-----------~~---------------------~------ 280 (535)
-.|+|||+|..|+-+|..|++.| .+|+|+++ +.... .+ +
T Consensus 6 ~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~~ 85 (602)
T 1kf6_A 6 ADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDY 85 (602)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHHHH
Confidence 36999999999999999999999 99999998 42200 00 0
Q ss_pred ------------------------------------------------HHHHHHHHHhhhcCC-eEE-cceEEEEEEEeC
Q psy14461 281 ------------------------------------------------QEMVRILLSSLTKAG-VSI-QCCVIEKVISSF 310 (535)
Q Consensus 281 ------------------------------------------------~~~~~~~~~~l~~~g-V~i-~~~~v~~i~~~~ 310 (535)
..+...+.+.+++.| |++ .++.++++..+
T Consensus 86 ~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~- 164 (602)
T 1kf6_A 86 FVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVD- 164 (602)
T ss_dssp HHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEEEE-
T ss_pred HHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEEEe-
Confidence 122233334445667 999 99999999876
Q ss_pred CCcE-EEEEecCCCCCceEEEcCEEEEccCC
Q psy14461 311 DGMK-GVRGFHPESKEPFADVFKTVVNAMEK 340 (535)
Q Consensus 311 ~~~~-~v~~~~~~~G~~~~~~~D~vi~a~G~ 340 (535)
++++ .|...+..+|+...+.++.||+|+|.
T Consensus 165 ~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 195 (602)
T 1kf6_A 165 DGHVRGLVAMNMMEGTLVQIRANAVVMATGG 195 (602)
T ss_dssp TTEEEEEEEEETTTTEEEEEECSCEEECCCC
T ss_pred CCEEEEEEEEEcCCCcEEEEEcCeEEECCCC
Confidence 4544 24333224676567999999999994
No 269
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.21 E-value=0.0011 Score=67.34 Aligned_cols=35 Identities=17% Similarity=0.014 Sum_probs=32.1
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSH 122 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~ 122 (535)
..+|+|||+|.+|+.+|+.+...+.+|+|+|+...
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~ 51 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTM 51 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 47999999999999999999888999999999864
No 270
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.21 E-value=0.0013 Score=66.41 Aligned_cols=35 Identities=14% Similarity=-0.111 Sum_probs=31.0
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHL 123 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~ 123 (535)
..+|+|||+|.+|+++|+.+. .+.+|+|+|+++.+
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~ 43 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQP 43 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSST
T ss_pred cCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCc
Confidence 467899999999999999888 58999999998644
No 271
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.19 E-value=0.00033 Score=72.11 Aligned_cols=31 Identities=29% Similarity=0.282 Sum_probs=29.4
Q ss_pred CcEEEECCChHHHHHHHHHHhC--CCcEEEEEc
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFL--GVPVTLVYS 272 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~--g~~Vtlv~~ 272 (535)
.+|+|||||.+|+-+|..|++. |.+|+|+++
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~ 69 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEE 69 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECS
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeC
Confidence 4799999999999999999999 999999987
No 272
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.18 E-value=0.002 Score=64.98 Aligned_cols=35 Identities=9% Similarity=-0.099 Sum_probs=31.7
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHL 123 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~ 123 (535)
.+|+|||+|.+|+++|+.+...+.+|+|+|+....
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~ 37 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPP 37 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 58999999999999999988889999999998643
No 273
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.17 E-value=0.00023 Score=67.31 Aligned_cols=38 Identities=13% Similarity=0.013 Sum_probs=34.0
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccccc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFR 126 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~ 126 (535)
.+|+|||+||+|+.+|+.+...+.+|+||||.+.+++.
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~ 40 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGR 40 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCc
Confidence 46899999999999999999999999999999877543
No 274
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.14 E-value=0.00053 Score=57.59 Aligned_cols=65 Identities=17% Similarity=0.180 Sum_probs=47.3
Q ss_pred hhHHHHhhhcCCcEEEEeCCCchhhHHHH-HHHHHhcC---CcceEEEEEeeCCccHHHHHHHHHhhCCCe
Q psy14461 47 PPAYISRLSYENRILIFTHAVLREENARA-ERYLNARG---DRFAVLYLDRIGDEGILLEEELKRQTNQRR 113 (535)
Q Consensus 47 l~~~~~~~i~~~~v~v~~k~~cp~~~~~~-k~~~~~~~---~~~~~~~v~iiG~G~aG~~~al~~~~~~~~ 113 (535)
....+..++..++|++|++++|| +|.++ +.++.+.+ .++..++++....|.. ....+....+..+
T Consensus 14 ~~~~~~~~i~~~~Vvvf~~~~Cp-~C~~alk~~L~~~~~~~i~~~~vdid~~~~~~~-~~~~l~~~~g~~t 82 (118)
T 3c1r_A 14 TIKHVKDLIAENEIFVASKTYCP-YCHAALNTLFEKLKVPRSKVLVLQLNDMKEGAD-IQAALYEINGQRT 82 (118)
T ss_dssp HHHHHHHHHHHSSEEEEECSSCH-HHHHHHHHHHTTSCCCGGGEEEEEGGGSTTHHH-HHHHHHHHHSCCS
T ss_pred HHHHHHHHHccCcEEEEEcCCCc-CHHHHHHHHHHHcCCCCCCeEEEECccCCChHH-HHHHHHHHhCCCC
Confidence 45677888888999999999999 99999 99999888 6665555554433333 5566665554433
No 275
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=97.13 E-value=0.0028 Score=65.25 Aligned_cols=48 Identities=10% Similarity=0.187 Sum_probs=37.1
Q ss_pred HhhhcCCeEE-cceEEEEEEEeCCCcEE-EEEecCCCCCceEEEcCEEEEccCCCCC
Q psy14461 289 SSLTKAGVSI-QCCVIEKVISSFDGMKG-VRGFHPESKEPFADVFKTVVNAMEKKFD 343 (535)
Q Consensus 289 ~~l~~~gV~i-~~~~v~~i~~~~~~~~~-v~~~~~~~G~~~~~~~D~vi~a~G~~p~ 343 (535)
+.+++.|+++ +++.|++|..+ ++++. |++ +|+ ++.+|.||+|+|....
T Consensus 204 ~~~~~~G~~i~~~~~V~~i~~~-~~~~~gv~~----~g~--~~~ad~VV~a~~~~~~ 253 (425)
T 3ka7_A 204 TVISANGGKIHTGQEVSKILIE-NGKAAGIIA----DDR--IHDADLVISNLGHAAT 253 (425)
T ss_dssp HHHHHTTCEEECSCCEEEEEEE-TTEEEEEEE----TTE--EEECSEEEECSCHHHH
T ss_pred HHHHHcCCEEEECCceeEEEEE-CCEEEEEEE----CCE--EEECCEEEECCCHHHH
Confidence 4456679999 99999999876 46554 554 565 7999999999986543
No 276
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.13 E-value=0.00084 Score=67.18 Aligned_cols=37 Identities=3% Similarity=-0.252 Sum_probs=32.6
Q ss_pred EEEEeeCCccHHHHHHHHHhh---CCCeEEEEecCCcccc
Q psy14461 89 LYLDRIGDEGILLEEELKRQT---NQRRDELQERGSHLSF 125 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~---~~~~V~lie~~~~~~~ 125 (535)
.+|+|||+|++|+.+|+.+.. .+.+|+||||++..++
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg 41 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGG 41 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCG
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCcc
Confidence 478999999999999998888 8899999999876543
No 277
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=97.12 E-value=0.0019 Score=66.50 Aligned_cols=31 Identities=19% Similarity=0.209 Sum_probs=29.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
++|+|||||..|+-+|..|++.|.+|+|+++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~ 31 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEK 31 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 3699999999999999999999999999987
No 278
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.11 E-value=0.00012 Score=81.02 Aligned_cols=85 Identities=21% Similarity=0.183 Sum_probs=64.0
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCC---------cc--CcHHHHHHHHHhhhcC-CeEE-cceEEEEE
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLL---------KH--FDQEMVRILLSSLTKA-GVSI-QCCVIEKV 306 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l---------~~--~~~~~~~~~~~~l~~~-gV~i-~~~~v~~i 306 (535)
.++|+|||||+.|+.+|..|+++|.+|+|+++ +.+. |. ...++...+.+.+++. ||++ .++.++
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~-- 468 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYRESPMT-- 468 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHHTSTTCGGGGHHHHHHHHHHHTCTTEEEESSCCCC--
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeeccCCCchhHHHHHHHHHHHHHHHcCCCEEEECCeec--
Confidence 46899999999999999999999999999998 6442 11 1245566677777776 8998 765321
Q ss_pred EEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCC
Q psy14461 307 ISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFD 343 (535)
Q Consensus 307 ~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~ 343 (535)
.. +++ ++.+|.+++|+|..|.
T Consensus 469 -----------~~---~~~--~~~~d~lvlAtG~~~~ 489 (690)
T 3k30_A 469 -----------GD---DIV--EFGFEHVITATGATWR 489 (690)
T ss_dssp -----------HH---HHH--HTTCCEEEECCCEEEC
T ss_pred -----------HH---HHh--hcCCCEEEEcCCCccc
Confidence 11 233 5789999999999865
No 279
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.11 E-value=0.005 Score=66.21 Aligned_cols=38 Identities=8% Similarity=0.038 Sum_probs=33.9
Q ss_pred eEEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccc
Q psy14461 87 AVLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLS 124 (535)
Q Consensus 87 ~~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~ 124 (535)
..++|+|||+|++|+.+|+.+...+.+|+|+||.+..+
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~g 157 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSG 157 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 35799999999999999999888889999999998653
No 280
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.11 E-value=0.0022 Score=65.27 Aligned_cols=36 Identities=6% Similarity=-0.095 Sum_probs=32.7
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHL 123 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~ 123 (535)
.++|+|||+|++|+.+|+.+...+.+|+|+|+.+..
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~ 39 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 478999999999999999998889999999998754
No 281
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.07 E-value=0.0027 Score=69.73 Aligned_cols=30 Identities=17% Similarity=0.242 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHHHh-----CCCcEEEEEc
Q psy14461 243 KTLVLGGSLMAVEIAATLNF-----LGVPVTLVYS 272 (535)
Q Consensus 243 ~vvViGgG~~g~e~A~~l~~-----~g~~Vtlv~~ 272 (535)
+|+|||||++|+-+|..|++ .|.+|+|+++
T Consensus 10 dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~ 44 (665)
T 1pn0_A 10 DVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDK 44 (665)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECS
T ss_pred cEEEECcCHHHHHHHHHHhccccccCCCCEEEEeC
Confidence 69999999999999999999 9999999987
No 282
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=97.07 E-value=0.0036 Score=63.47 Aligned_cols=35 Identities=6% Similarity=-0.020 Sum_probs=31.8
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHL 123 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~ 123 (535)
++|+|||+|.+|+.+|+.+...+.+|+|+|++...
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~ 38 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPP 38 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 68999999999999999998889999999998743
No 283
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.05 E-value=0.0013 Score=53.74 Aligned_cols=70 Identities=17% Similarity=0.210 Sum_probs=49.3
Q ss_pred hhHHHHhhhcCCcEEEEeC-----CCchhhHHHHHHHHHhcCCcceEEEEEeeCCccHHHHHHHHHhhCCCeE-EEEecC
Q psy14461 47 PPAYISRLSYENRILIFTH-----AVLREENARAERYLNARGDRFAVLYLDRIGDEGILLEEELKRQTNQRRD-ELQERG 120 (535)
Q Consensus 47 l~~~~~~~i~~~~v~v~~k-----~~cp~~~~~~k~~~~~~~~~~~~~~v~iiG~G~aG~~~al~~~~~~~~V-~lie~~ 120 (535)
+...+..++..++|++|++ ++|| +|.+++.++.+.+.++..++|. -. +. +...+....+..+| +|+-.+
T Consensus 6 ~~~~~~~~i~~~~vvvf~~g~~~~~~C~-~C~~~~~~L~~~~i~~~~vdi~--~~-~~-~~~~l~~~~g~~~vP~v~i~g 80 (105)
T 2yan_A 6 LEERLKVLTNKASVMLFMKGNKQEAKCG-FSKQILEILNSTGVEYETFDIL--ED-EE-VRQGLKAYSNWPTYPQLYVKG 80 (105)
T ss_dssp HHHHHHHHHTSSSEEEEESBCSSSBCTT-HHHHHHHHHHHHTCCCEEEEGG--GC-HH-HHHHHHHHHTCCSSCEEEETT
T ss_pred HHHHHHHHhccCCEEEEEecCCCCCCCc-cHHHHHHHHHHCCCCeEEEECC--CC-HH-HHHHHHHHHCCCCCCeEEECC
Confidence 4567788899999999999 9999 9999999999999876555443 22 33 66666555544443 344333
Q ss_pred C
Q psy14461 121 S 121 (535)
Q Consensus 121 ~ 121 (535)
.
T Consensus 81 ~ 81 (105)
T 2yan_A 81 E 81 (105)
T ss_dssp E
T ss_pred E
Confidence 3
No 284
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.05 E-value=0.002 Score=67.21 Aligned_cols=34 Identities=9% Similarity=-0.132 Sum_probs=31.5
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSH 122 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~ 122 (535)
++|+|||+|++|+.+|+.+...+.+|+|+|+.+.
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~ 40 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPW 40 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 5789999999999999999888999999999875
No 285
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.04 E-value=0.0022 Score=64.95 Aligned_cols=33 Identities=9% Similarity=-0.071 Sum_probs=30.4
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCC
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGS 121 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~ 121 (535)
.+|+|||+|.+|+.+|+.+...+.+|+|+|++.
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 578999999999999999888899999999985
No 286
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.04 E-value=0.0031 Score=67.89 Aligned_cols=37 Identities=11% Similarity=0.153 Sum_probs=33.5
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLS 124 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~ 124 (535)
..+|+|||+|++|+.+|+.+...+.+|+|+||.+..+
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~g 162 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIG 162 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 4689999999999999999988899999999998654
No 287
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.04 E-value=0.0027 Score=67.76 Aligned_cols=35 Identities=17% Similarity=-0.013 Sum_probs=32.3
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHL 123 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~ 123 (535)
.+|+|||+|++|+.+|+.+...+.+|+|||+.+..
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~ 40 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGL 40 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSC
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 68999999999999999999999999999998754
No 288
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.02 E-value=0.0026 Score=68.80 Aligned_cols=35 Identities=14% Similarity=-0.015 Sum_probs=31.7
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHL 123 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~ 123 (535)
.+|+|||+|++|+.+|+.+...+.+|+|+|+.+..
T Consensus 24 ~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~ 58 (591)
T 3i3l_A 24 SKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFP 58 (591)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCC
Confidence 68999999999999999888889999999998643
No 289
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.01 E-value=0.0026 Score=68.51 Aligned_cols=35 Identities=9% Similarity=-0.118 Sum_probs=31.3
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHL 123 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~ 123 (535)
++|+|||+|++|+.+|+.+...+.+|+|||+.+..
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~ 84 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEP 84 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCC
Confidence 67899999999999999998899999999998754
No 290
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.00 E-value=0.0014 Score=70.82 Aligned_cols=36 Identities=17% Similarity=0.125 Sum_probs=31.7
Q ss_pred EEEEeeCCccHHHHHHHHHhhC------CCeEEEEecCCccc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTN------QRRDELQERGSHLS 124 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~------~~~V~lie~~~~~~ 124 (535)
++|+|||+|++|+++|+.+... +.+|+|+||.+.++
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g 77 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIG 77 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTT
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCC
Confidence 5789999999999999988776 89999999987653
No 291
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=96.98 E-value=0.0047 Score=66.51 Aligned_cols=32 Identities=19% Similarity=0.319 Sum_probs=30.0
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
.-+|+|||||.+|+-+|..|+++|.+|+|+++
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~ 63 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIKTGLIEM 63 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC
Confidence 45799999999999999999999999999986
No 292
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=96.97 E-value=0.003 Score=71.22 Aligned_cols=31 Identities=16% Similarity=0.360 Sum_probs=29.5
Q ss_pred CcEEEECCChHHHHHHHHHHhCCC-cEEEEEc
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGV-PVTLVYS 272 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~-~Vtlv~~ 272 (535)
.+|+|||||.+|+-+|..|++.|. +|+|+++
T Consensus 5 ~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~ 36 (830)
T 1pj5_A 5 PRIVIIGAGIVGTNLADELVTRGWNNITVLDQ 36 (830)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCCEEEECS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCcEEEEeC
Confidence 479999999999999999999998 9999998
No 293
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=96.96 E-value=0.0037 Score=62.48 Aligned_cols=36 Identities=17% Similarity=0.036 Sum_probs=31.5
Q ss_pred EEEEeeCCccHHHHHHHHHhhC--CCeEEEEecCCccc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTN--QRRDELQERGSHLS 124 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~--~~~V~lie~~~~~~ 124 (535)
++|+|||+|++|+.+|+.+... +.+|+|+|+...++
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~G 117 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPG 117 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCC
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccC
Confidence 5789999999999999988765 89999999987654
No 294
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=96.96 E-value=0.0033 Score=66.74 Aligned_cols=35 Identities=23% Similarity=-0.028 Sum_probs=32.1
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSH 122 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~ 122 (535)
.++|+|||+|++|+.+|+.+...+.+|+|+|+.+.
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~ 41 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAF 41 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCC
Confidence 47899999999999999998888999999999874
No 295
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=96.95 E-value=0.0026 Score=66.91 Aligned_cols=30 Identities=20% Similarity=0.354 Sum_probs=28.5
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 243 KTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 243 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
.|+|||+|..|+-+|..|++.|.+|+++++
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek 30 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISK 30 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeC
Confidence 489999999999999999999999999987
No 296
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.94 E-value=0.0017 Score=55.41 Aligned_cols=67 Identities=16% Similarity=0.211 Sum_probs=49.8
Q ss_pred CCCCChhHHHHhhhcCCcEEEEeCCCchhhHHHHHHHHHhcCCcceEEEEEeeCCccHHHHHHHHHhhC
Q psy14461 42 PSFETPPAYISRLSYENRILIFTHAVLREENARAERYLNARGDRFAVLYLDRIGDEGILLEEELKRQTN 110 (535)
Q Consensus 42 p~~~~l~~~~~~~i~~~~v~v~~k~~cp~~~~~~k~~~~~~~~~~~~~~v~iiG~G~aG~~~al~~~~~ 110 (535)
+.-......+..++..++|++|++.+|| +|.+++.++.+.+.++..++|+..-.++. +...+....+
T Consensus 11 ~~~~~~~~~~~~~i~~~~vvvf~~~~Cp-~C~~~~~~L~~~~i~~~~vdid~~~~~~~-~~~~l~~~~g 77 (130)
T 2cq9_A 11 NLATAPVNQIQETISDNCVVIFSKTSCS-YCTMAKKLFHDMNVNYKVVELDLLEYGNQ-FQDALYKMTG 77 (130)
T ss_dssp CCSCCHHHHHHHHHHHSSEEEEECSSCS-HHHHHHHHHHHHTCCCEEEETTTSTTHHH-HHHHHHHHHS
T ss_pred cccHHHHHHHHHHHcCCcEEEEEcCCCh-HHHHHHHHHHHcCCCcEEEECcCCcCcHH-HHHHHHHHhC
Confidence 3445667778888888999999999999 99999999999998877666654433333 4555554444
No 297
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.92 E-value=0.0037 Score=66.19 Aligned_cols=93 Identities=18% Similarity=0.094 Sum_probs=64.8
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRFC 168 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 168 (535)
.+++|||+|..|+..|......+.+|+|+++.+.+ ++.+ +. ++.
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~------l~~~----------------------d~-~~~------- 220 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRI------LRKF----------------------DE-SVI------- 220 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSS------CTTS----------------------CH-HHH-------
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCcc------Cccc----------------------ch-hhH-------
Confidence 46899999999999988777788999999998754 1111 11 111
Q ss_pred HHHHHHHHHHHHhcCcEEEEeE-EEEec---CC--EEEEce-eE-EEcceEEEeeCceecC
Q psy14461 169 IRAKNDSMRELKALGIDIVRTA-AAFTN---PH--TIKLSN-RS-VTGFNFLLAVERRCLP 221 (535)
Q Consensus 169 ~~~~~~~~~~~~~~gV~~~~g~-~~~~~---~~--~v~~~~-~~-~~~d~lViATGs~p~~ 221 (535)
..+.+.+++.||+++.+. +..+. .. .+.+.+ .+ +.+|.||+|+|.+|..
T Consensus 221 ----~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 221 ----NVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp ----HHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTT
T ss_pred ----HHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCC
Confidence 122356778899998874 33222 12 455543 55 8999999999999976
No 298
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=96.92 E-value=0.005 Score=62.77 Aligned_cols=35 Identities=14% Similarity=0.016 Sum_probs=31.4
Q ss_pred EEEEEeeCCccHHHHHHHHHhh-CC-CeEEEEecCCc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQT-NQ-RRDELQERGSH 122 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~-~~-~~V~lie~~~~ 122 (535)
..+|+|||+|.+|+.+|+.+.. .+ .+|+|+|++..
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~~ 57 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWL 57 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSST
T ss_pred cCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCCC
Confidence 4789999999999999998887 78 89999999873
No 299
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.92 E-value=0.0072 Score=63.94 Aligned_cols=105 Identities=15% Similarity=0.054 Sum_probs=74.8
Q ss_pred cEEEECCChHHHHHHHHHHhCC--------------CcEEEEEc-CcC-------Ccc----------------------
Q psy14461 243 KTLVLGGSLMAVEIAATLNFLG--------------VPVTLVYS-RRL-------LKH---------------------- 278 (535)
Q Consensus 243 ~vvViGgG~~g~e~A~~l~~~g--------------~~Vtlv~~-~~~-------l~~---------------------- 278 (535)
.|+|||+|+.|+-+|..|.+.| ....++++ +.+ +|.
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~~s 120 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSSFT 120 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCTTS
T ss_pred cEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCccc
Confidence 5999999999999999988643 24567776 432 110
Q ss_pred ----------------------CcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCC-------cEEEEEecCCCCCceE
Q psy14461 279 ----------------------FDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDG-------MKGVRGFHPESKEPFA 328 (535)
Q Consensus 279 ----------------------~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~-------~~~v~~~~~~~G~~~~ 328 (535)
...++.++++...++.+..+ ++++|++++..+.+ ..+|+..+..+|+..+
T Consensus 121 f~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~ 200 (501)
T 4b63_A 121 FLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISA 200 (501)
T ss_dssp HHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEE
T ss_pred hHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEE
Confidence 01355666666666666678 89999999865322 3677776655677778
Q ss_pred EEcCEEEEccCCCCCCCCC
Q psy14461 329 DVFKTVVNAMEKKFDFAAL 347 (535)
Q Consensus 329 ~~~D~vi~a~G~~p~~~~l 347 (535)
+.++.|++|+|..|+....
T Consensus 201 ~~ar~vVlatG~~P~iP~~ 219 (501)
T 4b63_A 201 RRTRKVVIAIGGTAKMPSG 219 (501)
T ss_dssp EEEEEEEECCCCEECCCTT
T ss_pred EEeCEEEECcCCCCCCCCC
Confidence 9999999999998886643
No 300
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.90 E-value=0.0034 Score=69.13 Aligned_cols=35 Identities=11% Similarity=-0.199 Sum_probs=32.0
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHL 123 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~ 123 (535)
.+|+|||+|.+|+++|+.+...+.+|+|+|+...+
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~ 307 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLRRGWQVTLYCADEAP 307 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 68999999999999999999999999999997644
No 301
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=96.90 E-value=0.0016 Score=56.93 Aligned_cols=64 Identities=17% Similarity=0.248 Sum_probs=48.9
Q ss_pred CChhHHHHhhhcCCcEEEEeCCCchhhHHHHHHHHHhcCCcceEEEEEeeCCccHHHHHHHHHhhC
Q psy14461 45 ETPPAYISRLSYENRILIFTHAVLREENARAERYLNARGDRFAVLYLDRIGDEGILLEEELKRQTN 110 (535)
Q Consensus 45 ~~l~~~~~~~i~~~~v~v~~k~~cp~~~~~~k~~~~~~~~~~~~~~v~iiG~G~aG~~~al~~~~~ 110 (535)
.+....+..++.+++|++|++++|| +|.+++.++.+.+.++..++|+..-.++. +...+....+
T Consensus 36 ~~~~~~~~~~i~~~~Vvvf~~~~Cp-~C~~~k~~L~~~~i~~~~vdId~~~~~~~-~~~~L~~~~g 99 (146)
T 2ht9_A 36 TAPVNQIQETISDNCVVIFSKTSCS-YCTMAKKLFHDMNVNYKVVELDLLEYGNQ-FQDALYKMTG 99 (146)
T ss_dssp TCCHHHHHHHHHHCSEEEEECTTCH-HHHHHHHHHHHHTCCCEEEEGGGCTTHHH-HHHHHHHHHS
T ss_pred hHHHHHHHHHhcCCCEEEEECCCCh-hHHHHHHHHHHcCCCeEEEECccCcCCHH-HHHHHHHHhC
Confidence 4567777888888999999999999 99999999999998887776655433333 5555655444
No 302
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=96.89 E-value=0.009 Score=64.54 Aligned_cols=51 Identities=18% Similarity=0.070 Sum_probs=36.6
Q ss_pred hhcCCeEE-cceEEEEEEEeCCCcE-EEEEecCCCCCceEEEcCEEEEccCCC
Q psy14461 291 LTKAGVSI-QCCVIEKVISSFDGMK-GVRGFHPESKEPFADVFKTVVNAMEKK 341 (535)
Q Consensus 291 l~~~gV~i-~~~~v~~i~~~~~~~~-~v~~~~~~~G~~~~~~~D~vi~a~G~~ 341 (535)
+++.||++ .++.++++..++++++ .|...++.+|+...+.++.||+|+|..
T Consensus 153 ~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~ 205 (588)
T 2wdq_A 153 NLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGA 205 (588)
T ss_dssp HHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCC
Confidence 34568999 9999999986423444 355443246766679999999999964
No 303
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=96.88 E-value=0.0065 Score=65.10 Aligned_cols=32 Identities=25% Similarity=0.242 Sum_probs=30.2
Q ss_pred CCcEEEECCChHHHHHHHHHHh---CCCcEEEEEc
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNF---LGVPVTLVYS 272 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~---~g~~Vtlv~~ 272 (535)
..+|+|||||..|+-+|..|++ .|.+|+|+++
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~ 59 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQA 59 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEEC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeC
Confidence 4689999999999999999999 9999999997
No 304
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.87 E-value=0.00034 Score=77.83 Aligned_cols=85 Identities=15% Similarity=0.047 Sum_probs=56.2
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCcc---------C--cHHHHHHHHHhhhc------CCeEE-cce
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKH---------F--DQEMVRILLSSLTK------AGVSI-QCC 301 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~---------~--~~~~~~~~~~~l~~------~gV~i-~~~ 301 (535)
.++|+|||||+.|+.+|..|+++|.+|+|+++ +.+... . -..+.+.+.+.++. .++++ .+.
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~~pg~~~~~~~~~~~~~~i~~~~~~~~~~v~i~~~~ 468 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAALPGLGEWSYHRDYRETQITKLLKKNKESQLALGQK 468 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTTSTTCGGGHHHHHHHHHHHHHHHHHSTTCEEECSCC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecccCCChHHHHHHHHHHHHHHHHhhcccCCceEEEeCe
Confidence 46899999999999999999999999999998 654221 1 12223333232222 25555 432
Q ss_pred EEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCC
Q psy14461 302 VIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFD 343 (535)
Q Consensus 302 ~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~ 343 (535)
. ++++ ++. .+.+|.|++|||..|.
T Consensus 469 ~-------------v~~~---~~~--~~~~d~vviAtG~~~~ 492 (729)
T 1o94_A 469 P-------------MTAD---DVL--QYGADKVIIATGARWN 492 (729)
T ss_dssp C-------------CCHH---HHH--TSCCSEEEECCCEEEC
T ss_pred E-------------Eehh---hcc--ccCCCEEEEcCCCCcc
Confidence 1 2221 333 4789999999999864
No 305
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=96.86 E-value=0.0024 Score=65.53 Aligned_cols=35 Identities=17% Similarity=0.041 Sum_probs=31.3
Q ss_pred EEEEEeeCCccHHHHHHHHHhhC--CCeEEEEecCCc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTN--QRRDELQERGSH 122 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~--~~~V~lie~~~~ 122 (535)
..+|+|||+|.+|+++|+.+... +.+|+|+|++..
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~ 72 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGL 72 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCS
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 47899999999999999988877 899999999763
No 306
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=96.85 E-value=0.0015 Score=65.34 Aligned_cols=66 Identities=12% Similarity=0.049 Sum_probs=49.9
Q ss_pred hhHHHHhhhcCCcEEEEeCCCchhhHHHHHH-HHHhcCCcceEEEEE---eeCCccHHHHHHHHHhhCCCeE
Q psy14461 47 PPAYISRLSYENRILIFTHAVLREENARAER-YLNARGDRFAVLYLD---RIGDEGILLEEELKRQTNQRRD 114 (535)
Q Consensus 47 l~~~~~~~i~~~~v~v~~k~~cp~~~~~~k~-~~~~~~~~~~~~~v~---iiG~G~aG~~~al~~~~~~~~V 114 (535)
+...+..+++.++|++|++++|| +|.++++ ++.+.+.++..++|+ .+..++. +..++....+..+|
T Consensus 250 ~~~~V~~lI~~~~VvVYsk~~CP-yC~~Ak~~LL~~~gV~y~eidVlEld~~~~~~e-~~~~L~~~tG~~TV 319 (362)
T 2jad_A 250 TIKHVKDLIAENEIFVASKTYCP-YSHAALNTLFEKLKVPRSKVLVLQLNDMKEGAD-IQAALYEINGQRTV 319 (362)
T ss_dssp HHHHHHHHHHTCSEEEEECTTCH-HHHHHHHHHHTTTCCCTTTEEEEEGGGSTTHHH-HHHHHHHHHCCCSS
T ss_pred HHHHHHHHhccCCEEEEEcCCCc-chHHHHHHHHHHcCCCcceEEEEEeccccCCHH-HHHHHHHHHCCCCc
Confidence 56788899999999999999999 9999997 788888776544443 2334444 77777776655444
No 307
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=96.84 E-value=0.0055 Score=64.82 Aligned_cols=36 Identities=8% Similarity=-0.198 Sum_probs=32.6
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHL 123 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~ 123 (535)
.++|+|||+|++|+.+|+.+...+.+|+|+|+.+..
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~ 47 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQR 47 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 378999999999999999998899999999998754
No 308
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=96.83 E-value=0.0037 Score=61.92 Aligned_cols=36 Identities=11% Similarity=0.018 Sum_probs=32.1
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLS 124 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~ 124 (535)
.+|+|||+|++|+.+|+.+...+.+|+|+|+.+..+
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~g 38 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSG 38 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCc
Confidence 368999999999999999888899999999987553
No 309
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=96.80 E-value=0.0004 Score=70.80 Aligned_cols=34 Identities=21% Similarity=0.180 Sum_probs=30.8
Q ss_pred CcEEEECCChHHHHHHHHHHhC--CCcEEEEEc-CcC
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFL--GVPVTLVYS-RRL 275 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~--g~~Vtlv~~-~~~ 275 (535)
.+|+|||||+.|+.+|..|++. |.+|+|+++ +.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 3699999999999999999999 999999998 543
No 310
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=96.80 E-value=0.0021 Score=52.24 Aligned_cols=60 Identities=10% Similarity=0.211 Sum_probs=43.7
Q ss_pred HHHHhhhcCCcEEEEeCCCchhhHHHHHHHHHhcCCc---ceEEEEEeeCCccHHHHHHHHHhhC
Q psy14461 49 AYISRLSYENRILIFTHAVLREENARAERYLNARGDR---FAVLYLDRIGDEGILLEEELKRQTN 110 (535)
Q Consensus 49 ~~~~~~i~~~~v~v~~k~~cp~~~~~~k~~~~~~~~~---~~~~~v~iiG~G~aG~~~al~~~~~ 110 (535)
..+..++.+++|++|++++|| +|.+++.++.+.+.+ +..++++.-..++. +...+....+
T Consensus 3 ~~~~~~i~~~~v~~f~~~~C~-~C~~~~~~L~~~~~~~~~~~~vdi~~~~~~~~-~~~~l~~~~g 65 (105)
T 1kte_A 3 AFVNSKIQPGKVVVFIKPTCP-FCRKTQELLSQLPFKEGLLEFVDITATSDTNE-IQDYLQQLTG 65 (105)
T ss_dssp HHHHHHCCTTCEEEEECSSCH-HHHHHHHHHHHSCBCTTSEEEEEGGGSTTHHH-HHHHHHHHHS
T ss_pred hHHHhhcccCCEEEEEcCCCH-hHHHHHHHHHHcCCCCCccEEEEccCCCCHHH-HHHHHHHHhC
Confidence 456778889999999999999 999999999998877 65555544333333 4555555444
No 311
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=96.79 E-value=0.0034 Score=67.11 Aligned_cols=30 Identities=17% Similarity=0.233 Sum_probs=28.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
-.|+|||+|..|+-+|..|++ |.+|+|+++
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk 38 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-QHQVIVLSK 38 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-TSCEEEECS
T ss_pred CCEEEECccHHHHHHHHHHhc-CCcEEEEEC
Confidence 369999999999999999999 999999998
No 312
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=96.79 E-value=0.01 Score=63.97 Aligned_cols=37 Identities=16% Similarity=0.095 Sum_probs=33.1
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLS 124 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~ 124 (535)
..+|+|||+|++|+.+|+.+...+.+|+|+|+.+.++
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~ 162 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPG 162 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCC
Confidence 4678999999999999999988899999999998654
No 313
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=96.71 E-value=0.011 Score=64.31 Aligned_cols=50 Identities=14% Similarity=-0.087 Sum_probs=36.3
Q ss_pred hcCCeEE-cceEEEEEEEeCCCcEE-EEEecCCCCCceEEEcCEEEEccCCCC
Q psy14461 292 TKAGVSI-QCCVIEKVISSFDGMKG-VRGFHPESKEPFADVFKTVVNAMEKKF 342 (535)
Q Consensus 292 ~~~gV~i-~~~~v~~i~~~~~~~~~-v~~~~~~~G~~~~~~~D~vi~a~G~~p 342 (535)
.+.||++ .++.+.++..+ ++++. |...+..+|+...+.++.||+|+|-..
T Consensus 166 ~~~gv~i~~~~~v~~Li~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 166 LRYDTSYFVEYFALDLLME-NGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp TTSCCEEEETEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HhCCCEEEEceEEEEEEEE-CCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 4568999 99999999765 45543 444322367766799999999999644
No 314
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=96.69 E-value=0.008 Score=63.60 Aligned_cols=36 Identities=8% Similarity=-0.201 Sum_probs=31.9
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHL 123 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~ 123 (535)
.++|+|||+|++|+.+|+.+...+.+|+|+|+.+..
T Consensus 11 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~ 46 (500)
T 2qa1_A 11 DAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVER 46 (500)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 367899999999999999998899999999998754
No 315
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=96.68 E-value=0.0059 Score=62.64 Aligned_cols=35 Identities=17% Similarity=-0.041 Sum_probs=31.7
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCe-EEEEecCCcc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRR-DELQERGSHL 123 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~-V~lie~~~~~ 123 (535)
++|+|||+|++|+.+|+.+...+.+ |+|+|+.+..
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~ 40 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEI 40 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCc
Confidence 5789999999999999998888999 9999998754
No 316
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=96.68 E-value=0.0061 Score=64.90 Aligned_cols=32 Identities=22% Similarity=0.247 Sum_probs=30.1
Q ss_pred CCcEEEECCChHHHHHHHHHHh------------CCCcEEEEEc
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNF------------LGVPVTLVYS 272 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~------------~g~~Vtlv~~ 272 (535)
..+|+|||||..|+-+|..|++ .|.+|+|+++
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~ 50 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIES 50 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeC
Confidence 4689999999999999999999 8999999997
No 317
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=96.67 E-value=0.005 Score=62.89 Aligned_cols=34 Identities=15% Similarity=0.065 Sum_probs=31.3
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSH 122 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~ 122 (535)
.+|+|||+|++|+.+|+.+...+.+|+|+|+.+.
T Consensus 6 ~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 6 DRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 4789999999999999999888999999999875
No 318
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=96.66 E-value=0.0071 Score=64.57 Aligned_cols=92 Identities=13% Similarity=-0.056 Sum_probs=63.4
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRFC 168 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 168 (535)
.+++|||+|..|+..|-.....+.+|||+++...+ +.+ |.+ +
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L-------~~~----------------------D~e-i-------- 265 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVL-------RGF----------------------DQQ-C-------- 265 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSS-------TTS----------------------CHH-H--------
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEecccccc-------ccc----------------------chh-H--------
Confidence 46799999999999887777778899999876532 211 111 1
Q ss_pred HHHHHHHHHHHHhcCcEEEEeEEE-E--ecCCEEEE--ce-eEEEcceEEEeeCceecC
Q psy14461 169 IRAKNDSMRELKALGIDIVRTAAA-F--TNPHTIKL--SN-RSVTGFNFLLAVERRCLP 221 (535)
Q Consensus 169 ~~~~~~~~~~~~~~gV~~~~g~~~-~--~~~~~v~~--~~-~~~~~d~lViATGs~p~~ 221 (535)
...+...+++.||+++.+... . .....+.+ .+ .++.+|.|++|+|-+|+.
T Consensus 266 ---~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt 321 (542)
T 4b1b_A 266 ---AVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGDI 321 (542)
T ss_dssp ---HHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEESC
T ss_pred ---HHHHHHHHHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCCc
Confidence 122346678899999887522 1 22333333 33 678899999999999987
No 319
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=96.64 E-value=0.0068 Score=64.70 Aligned_cols=34 Identities=12% Similarity=-0.095 Sum_probs=30.6
Q ss_pred EEEEeeCCccHHHHHHHHHhh---CCCeEEEEecCCc
Q psy14461 89 LYLDRIGDEGILLEEELKRQT---NQRRDELQERGSH 122 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~---~~~~V~lie~~~~ 122 (535)
.+|+|||+|++|+.+|+.+.. .+.+|+|+|+...
T Consensus 6 ~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 42 (538)
T 2aqj_A 6 KNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAI 42 (538)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence 579999999999999998888 8899999999763
No 320
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=96.60 E-value=0.0066 Score=61.78 Aligned_cols=34 Identities=15% Similarity=-0.037 Sum_probs=30.7
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSH 122 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~ 122 (535)
.+|+|||+|++|+.+|+.+...+.+|+|+|+.+.
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 4689999999999999988888999999999874
No 321
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=96.58 E-value=0.01 Score=62.85 Aligned_cols=31 Identities=29% Similarity=0.292 Sum_probs=29.5
Q ss_pred CcEEEECCChHHHHHHHHHHh---CCCcEEEEEc
Q psy14461 242 GKTLVLGGSLMAVEIAATLNF---LGVPVTLVYS 272 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~---~g~~Vtlv~~ 272 (535)
.+|+|||||.+|+-+|..|++ .|.+|+|+++
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~ 36 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVES 36 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEec
Confidence 579999999999999999999 9999999987
No 322
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=96.58 E-value=0.0029 Score=52.51 Aligned_cols=62 Identities=15% Similarity=0.197 Sum_probs=44.9
Q ss_pred hhHHHHhhhcCCcEEEEeCCCchhhHHHHHHHHHhcCCc---ceEEEEEeeCCccHHHHHHHHHhhC
Q psy14461 47 PPAYISRLSYENRILIFTHAVLREENARAERYLNARGDR---FAVLYLDRIGDEGILLEEELKRQTN 110 (535)
Q Consensus 47 l~~~~~~~i~~~~v~v~~k~~cp~~~~~~k~~~~~~~~~---~~~~~v~iiG~G~aG~~~al~~~~~ 110 (535)
.+..+..++..++|++|++++|| +|.+++.++.+.+.+ +..++|..-..|.. ....+....+
T Consensus 8 ~~~~~~~~i~~~~vv~f~~~~Cp-~C~~~~~~L~~~~~~~~~~~~vdi~~~~~~~~-~~~~l~~~~g 72 (114)
T 2hze_A 8 AEEFVQQRLANNKVTIFVKYTCP-FCRNALDILNKFSFKRGAYEIVDIKEFKPENE-LRDYFEQITG 72 (114)
T ss_dssp HHHHHHTTCCTTCEEEEECTTCH-HHHHHHHHHTTSCBCTTSEEEEEGGGSSSHHH-HHHHHHHHHS
T ss_pred HHHHHHHHhccCCEEEEEeCCCh-hHHHHHHHHHHcCCCcCceEEEEccCCCChHH-HHHHHHHHhC
Confidence 45678888999999999999999 999999999988877 65555443322223 4455554443
No 323
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=96.58 E-value=0.0051 Score=48.24 Aligned_cols=52 Identities=12% Similarity=0.075 Sum_probs=38.4
Q ss_pred cEEEEeCC----CchhhHHHHHHHHHhcCCcceEEEEEeeC--CccHHHHHHHHHhhCCC
Q psy14461 59 RILIFTHA----VLREENARAERYLNARGDRFAVLYLDRIG--DEGILLEEELKRQTNQR 112 (535)
Q Consensus 59 ~v~v~~k~----~cp~~~~~~k~~~~~~~~~~~~~~v~iiG--~G~aG~~~al~~~~~~~ 112 (535)
+|.+|+++ +|| +|.+++.++.+.+.+++.++|.... ..+. ...++....+..
T Consensus 1 ~v~iY~~~~~~~~Cp-~C~~ak~~L~~~gi~y~~idI~~~~~~~~~~-~~~~l~~~~g~~ 58 (87)
T 1aba_A 1 MFKVYGYDSNIHKCG-PCDNAKRLLTVKKQPFEFINIMPEKGVFDDE-KIAELLTKLGRD 58 (87)
T ss_dssp CEEEEECCTTTSCCH-HHHHHHHHHHHTTCCEEEEESCSBTTBCCHH-HHHHHHHHHTCS
T ss_pred CEEEEEeCCCCCcCc-cHHHHHHHHHHcCCCEEEEEeeccccccCHH-HHHHHHHHhCCC
Confidence 37899999 999 9999999999999888776665332 2344 666676555444
No 324
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=96.56 E-value=0.0017 Score=61.16 Aligned_cols=33 Identities=21% Similarity=0.279 Sum_probs=30.8
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcC
Q psy14461 243 KTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRL 275 (535)
Q Consensus 243 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~ 275 (535)
.|+|||+|++|+-+|..|++.|.+|+|+++ +.+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 599999999999999999999999999998 654
No 325
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=96.53 E-value=0.0021 Score=65.01 Aligned_cols=37 Identities=5% Similarity=-0.093 Sum_probs=33.5
Q ss_pred eEEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcc
Q psy14461 87 AVLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHL 123 (535)
Q Consensus 87 ~~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~ 123 (535)
+-+||+|||+||+|+.+|+.+...+.+|+|+||.+.+
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~ 39 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 3579999999999999999999999999999998754
No 326
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=96.51 E-value=0.015 Score=63.67 Aligned_cols=30 Identities=23% Similarity=0.408 Sum_probs=28.6
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 243 KTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 243 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
.|+|||+|..|+-+|..+++.|.+|+++++
T Consensus 7 DVvVIGgG~AGL~AAl~aae~G~~V~vlEK 36 (660)
T 2bs2_A 7 DSLVIGGGLAGLRAAVATQQKGLSTIVLSL 36 (660)
T ss_dssp SEEEECCSHHHHHHHHHHHTTTCCEEEECS
T ss_pred cEEEECchHHHHHHHHHHHHCCCcEEEEec
Confidence 699999999999999999999999999987
No 327
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=96.49 E-value=0.011 Score=62.24 Aligned_cols=92 Identities=12% Similarity=-0.043 Sum_probs=61.5
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHHH
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRFC 168 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 168 (535)
.+++|||+|..|+..|......+.+|+++++.+.+ ++.. +. ++.+
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~------l~~~----------------------d~-~~~~------ 219 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSV------ANLQ----------------------DE-EMKR------ 219 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCC------TTCC----------------------CH-HHHH------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcc------cccC----------------------CH-HHHH------
Confidence 46799999999999998887888999999998754 1111 11 1111
Q ss_pred HHHHHHHHHHHHhcCcEEEEeE-EEEe--cCC--EEEE---ce--eEEEcceEEEeeCceecC
Q psy14461 169 IRAKNDSMRELKALGIDIVRTA-AAFT--NPH--TIKL---SN--RSVTGFNFLLAVERRCLP 221 (535)
Q Consensus 169 ~~~~~~~~~~~~~~gV~~~~g~-~~~~--~~~--~v~~---~~--~~~~~d~lViATGs~p~~ 221 (535)
.+.+.+++. |+++.+. +..+ ++. .+.+ ++ .++.+|.||+|||.+|..
T Consensus 220 -----~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~ 276 (492)
T 3ic9_A 220 -----YAEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKANV 276 (492)
T ss_dssp -----HHHHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEESC
T ss_pred -----HHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccCC
Confidence 122445555 8887653 2222 222 2444 23 679999999999999987
No 328
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=96.41 E-value=0.003 Score=51.11 Aligned_cols=49 Identities=22% Similarity=0.277 Sum_probs=36.7
Q ss_pred cCCcEEEEeCCCchhhHHHHHHHHHhcCCcceEEEEEeeCCccHHHHHHHHHhh
Q psy14461 56 YENRILIFTHAVLREENARAERYLNARGDRFAVLYLDRIGDEGILLEEELKRQT 109 (535)
Q Consensus 56 ~~~~v~v~~k~~cp~~~~~~k~~~~~~~~~~~~~~v~iiG~G~aG~~~al~~~~ 109 (535)
..++|.+|++++|| +|.+++.++.+.+.++..++|.. . +. ....+....
T Consensus 14 ~~~~v~vy~~~~Cp-~C~~ak~~L~~~~i~y~~idI~~--~-~~-~~~~l~~~~ 62 (99)
T 3qmx_A 14 VSAKIEIYTWSTCP-FCMRALALLKRKGVEFQEYCIDG--D-NE-AREAMAARA 62 (99)
T ss_dssp CCCCEEEEECTTCH-HHHHHHHHHHHHTCCCEEEECTT--C-HH-HHHHHHHHT
T ss_pred CCCCEEEEEcCCCh-hHHHHHHHHHHCCCCCEEEEcCC--C-HH-HHHHHHHHh
Confidence 45689999999999 99999999999998876555432 2 33 555565544
No 329
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=96.22 E-value=0.017 Score=62.98 Aligned_cols=36 Identities=11% Similarity=-0.067 Sum_probs=32.5
Q ss_pred EEEEEeeCCccHHHHHHHHHhh-CCCeEEEEecCCcc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQT-NQRRDELQERGSHL 123 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~-~~~~V~lie~~~~~ 123 (535)
..+|+|||+|++|+.+|+.+.. .+.+|+|+|+.+..
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~ 68 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGP 68 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSC
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 4789999999999999999988 89999999998753
No 330
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=95.92 E-value=0.0056 Score=49.74 Aligned_cols=37 Identities=16% Similarity=0.373 Sum_probs=32.0
Q ss_pred cCCcEEEEeCCCchhhHHHHHHHHHhcCCcceEEEEEe
Q psy14461 56 YENRILIFTHAVLREENARAERYLNARGDRFAVLYLDR 93 (535)
Q Consensus 56 ~~~~v~v~~k~~cp~~~~~~k~~~~~~~~~~~~~~v~i 93 (535)
.+++|.+|++++|| +|.+++.++.+.+.+++.++|..
T Consensus 20 ~~~~v~ly~~~~Cp-~C~~ak~~L~~~~i~y~~vdI~~ 56 (103)
T 3nzn_A 20 DRGKVIMYGLSTCV-WCKKTKKLLTDLGVDFDYVYVDR 56 (103)
T ss_dssp CCSCEEEEECSSCH-HHHHHHHHHHHHTBCEEEEEGGG
T ss_pred CCCeEEEEcCCCCc-hHHHHHHHHHHcCCCcEEEEeec
Confidence 45789999999999 99999999999998877666654
No 331
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=95.91 E-value=0.006 Score=62.07 Aligned_cols=36 Identities=17% Similarity=-0.042 Sum_probs=32.4
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLS 124 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~ 124 (535)
++|+|||+|++|+.+|+.+...+.+|+||||.+...
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~ 37 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAAS 37 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCC
Confidence 578999999999999999999999999999987543
No 332
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=95.89 E-value=0.0069 Score=63.89 Aligned_cols=51 Identities=16% Similarity=0.143 Sum_probs=40.6
Q ss_pred HHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccC
Q psy14461 281 QEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAME 339 (535)
Q Consensus 281 ~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G 339 (535)
..+.+.+.+.+.+.|+++ +++.|++|..+ ++ .+++ .+|+ ++.+|.||.++.
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~-~~--~v~~---~~G~--~~~ad~vI~t~P 273 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNAN-NK--TVTL---QDGT--TIGYKKLVSTMA 273 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETT-TT--EEEE---TTSC--EEEEEEEEECSC
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEcc-CC--EEEE---cCCC--EEECCEEEECCC
Confidence 456777888888999999 99999999864 33 3555 3788 899999998875
No 333
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=95.86 E-value=0.032 Score=60.85 Aligned_cols=31 Identities=29% Similarity=0.337 Sum_probs=28.6
Q ss_pred CcEEEECCChHHHHHHHHHH---h-CCCcEEEEEc
Q psy14461 242 GKTLVLGGSLMAVEIAATLN---F-LGVPVTLVYS 272 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~---~-~g~~Vtlv~~ 272 (535)
-.|+|||+|..|+-+|..++ + .|.+|+|+++
T Consensus 23 ~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK 57 (643)
T 1jnr_A 23 TDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEK 57 (643)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECS
T ss_pred CCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeC
Confidence 36999999999999999999 6 8999999987
No 334
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=95.83 E-value=0.034 Score=62.57 Aligned_cols=34 Identities=12% Similarity=-0.061 Sum_probs=30.7
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCC-eEEEEecCCc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQR-RDELQERGSH 122 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~-~V~lie~~~~ 122 (535)
.+|+|||+|.+|+++|+.+...+. +|+|+|++..
T Consensus 5 ~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~ 39 (830)
T 1pj5_A 5 PRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPL 39 (830)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCT
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCC
Confidence 478999999999999999888887 9999999874
No 335
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=95.67 E-value=0.036 Score=61.70 Aligned_cols=34 Identities=21% Similarity=0.394 Sum_probs=31.1
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-Cc
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RR 274 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~ 274 (535)
..+|+|||+|.+|+-+|..|++.|.+|+++++ +.
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~ 370 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDR 370 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccc
Confidence 36899999999999999999999999999987 53
No 336
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=95.49 E-value=0.01 Score=60.95 Aligned_cols=56 Identities=7% Similarity=0.027 Sum_probs=44.9
Q ss_pred cHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCC
Q psy14461 280 DQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFD 343 (535)
Q Consensus 280 ~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~ 343 (535)
...+.+.+.+.+++.|+++ +++.|++|..+ ++++ |. .+|+ ++.+|.||+|+|....
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~v-V~----~~g~--~~~ad~Vv~a~~~~~~ 244 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILTRKEVVEINIE-EKKV-YT----RDNE--EYSFDVAISNVGVRET 244 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEESSCCEEEEETT-TTEE-EE----TTCC--EEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEE-CCEE-EE----eCCc--EEEeCEEEECCCHHHH
Confidence 3677888888999999999 99999999875 4555 42 2676 7999999999997543
No 337
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=95.46 E-value=0.025 Score=61.77 Aligned_cols=31 Identities=19% Similarity=0.133 Sum_probs=28.7
Q ss_pred CcEEEECCChHHHHHHHHHHhC------CCcEEEEEc
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFL------GVPVTLVYS 272 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~ 272 (535)
-.|+|||+|..|+-+|..|++. |.+|+|+++
T Consensus 23 ~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK 59 (662)
T 3gyx_A 23 VDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDK 59 (662)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECS
T ss_pred cCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEe
Confidence 3699999999999999999997 999999987
No 338
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=95.46 E-value=0.011 Score=60.78 Aligned_cols=36 Identities=17% Similarity=-0.067 Sum_probs=32.4
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLS 124 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~ 124 (535)
++|+|||+|.+|+++|..+...+.+|+|+|+++.++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~G 36 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITG 36 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSB
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCC
Confidence 378999999999999999988899999999987654
No 339
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=95.36 E-value=0.0082 Score=63.21 Aligned_cols=36 Identities=17% Similarity=-0.117 Sum_probs=29.6
Q ss_pred EEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccc
Q psy14461 90 YLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSF 125 (535)
Q Consensus 90 ~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~ 125 (535)
+|+|||+|.+|++||..+...+.+|+|+|+.+.+++
T Consensus 3 ~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG 38 (501)
T 4dgk_A 3 PTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGG 38 (501)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEECCC-----
T ss_pred CEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCC
Confidence 579999999999999999999999999999986654
No 340
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=95.26 E-value=0.035 Score=43.92 Aligned_cols=48 Identities=13% Similarity=0.362 Sum_probs=35.8
Q ss_pred CcEEEEeCCCchhhH------HHHHHHHHhcCCcceEEEEEeeCCccHHHHHHHHHhhC
Q psy14461 58 NRILIFTHAVLREEN------ARAERYLNARGDRFAVLYLDRIGDEGILLEEELKRQTN 110 (535)
Q Consensus 58 ~~v~v~~k~~cp~~~------~~~k~~~~~~~~~~~~~~v~iiG~G~aG~~~al~~~~~ 110 (535)
.+|++|+++.|| +| .++++++.+.+.+++.++|. .. +. ....+....+
T Consensus 2 ~~v~ly~~~~C~-~c~~~~~~~~ak~~L~~~~i~~~~~di~--~~-~~-~~~~l~~~~g 55 (93)
T 1t1v_A 2 SGLRVYSTSVTG-SREIKSQQSEVTRILDGKRIQYQLVDIS--QD-NA-LRDEMRTLAG 55 (93)
T ss_dssp CCEEEEECSSCS-CHHHHHHHHHHHHHHHHTTCCCEEEETT--SC-HH-HHHHHHHHTT
T ss_pred CCEEEEEcCCCC-CchhhHHHHHHHHHHHHCCCceEEEECC--CC-HH-HHHHHHHHhC
Confidence 368999999999 99 89999999999887655543 22 33 5666666544
No 341
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=95.16 E-value=0.018 Score=44.79 Aligned_cols=36 Identities=14% Similarity=0.207 Sum_probs=31.3
Q ss_pred cEEEEeCCCchhhHHHHHHHHHhcCCcceEEEEEeeC
Q psy14461 59 RILIFTHAVLREENARAERYLNARGDRFAVLYLDRIG 95 (535)
Q Consensus 59 ~v~v~~k~~cp~~~~~~k~~~~~~~~~~~~~~v~iiG 95 (535)
+|.+|++++|| +|.+++.++.+.+.+++.+++++.-
T Consensus 5 ~v~ly~~~~Cp-~C~~~~~~L~~~~i~~~~~~vd~~~ 40 (89)
T 3msz_A 5 KVKIYTRNGCP-YCVWAKQWFEENNIAFDETIIDDYA 40 (89)
T ss_dssp CEEEEECTTCH-HHHHHHHHHHHTTCCCEEEECCSHH
T ss_pred EEEEEEcCCCh-hHHHHHHHHHHcCCCceEEEeecCC
Confidence 58899999999 9999999999999888777776653
No 342
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=95.11 E-value=0.017 Score=61.19 Aligned_cols=40 Identities=15% Similarity=-0.059 Sum_probs=35.6
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCC-CeEEEEecCCcccccc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQ-RRDELQERGSHLSFRK 127 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~-~~V~lie~~~~~~~~~ 127 (535)
..+|+|||+|.+|+++|..+...+ .+|+|+|+.+.+++..
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCce
Confidence 468999999999999999888888 9999999999887653
No 343
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=95.09 E-value=0.016 Score=59.26 Aligned_cols=36 Identities=11% Similarity=-0.067 Sum_probs=32.6
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHL 123 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~ 123 (535)
.++|+|||+|++|+.+|+.+...+.+|+|+|+.+..
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~ 58 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEI 58 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 368999999999999999998899999999998754
No 344
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=95.01 E-value=0.02 Score=58.41 Aligned_cols=35 Identities=20% Similarity=0.058 Sum_probs=31.8
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHL 123 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~ 123 (535)
.+|+|||+|++|+.+|+.+...+.+|+|||+.+..
T Consensus 27 ~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 61 (398)
T 2xdo_A 27 KNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDR 61 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSST
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCc
Confidence 57899999999999999998889999999998754
No 345
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=94.99 E-value=0.04 Score=43.00 Aligned_cols=34 Identities=18% Similarity=0.335 Sum_probs=28.5
Q ss_pred CcEEEEeCCCchhhHHHHHHHHHhcCCcceEEEEE
Q psy14461 58 NRILIFTHAVLREENARAERYLNARGDRFAVLYLD 92 (535)
Q Consensus 58 ~~v~v~~k~~cp~~~~~~k~~~~~~~~~~~~~~v~ 92 (535)
+++++|++++|| +|.+++.++...+.++..+++.
T Consensus 6 ~~v~~y~~~~C~-~C~~~~~~L~~~~i~~~~vdv~ 39 (89)
T 2klx_A 6 KEIILYTRPNCP-YCKRARDLLDKKGVKYTDIDAS 39 (89)
T ss_dssp CCEEEESCSCCT-TTHHHHHHHHHHTCCEEEECSC
T ss_pred ceEEEEECCCCh-hHHHHHHHHHHcCCCcEEEECC
Confidence 368899999999 9999999999998877555544
No 346
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=94.97 E-value=0.019 Score=58.33 Aligned_cols=54 Identities=13% Similarity=0.097 Sum_probs=41.8
Q ss_pred HHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCC
Q psy14461 281 QEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKK 341 (535)
Q Consensus 281 ~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~ 341 (535)
..+...+.+.+++.|+++ .+++|++++.+ ++.+.|+. .+| ++.+|.||+|+|..
T Consensus 153 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~-~~~v~v~t---~~g---~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 153 RGTLAALFTLAQAAGATLRAGETVTELVPD-ADGVSVTT---DRG---TYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEE-TTEEEEEE---SSC---EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEc-CCeEEEEE---CCC---EEEcCEEEEcCCcC
Confidence 355667777788889999 99999999876 45566554 234 69999999999975
No 347
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=94.95 E-value=0.021 Score=60.51 Aligned_cols=37 Identities=11% Similarity=-0.101 Sum_probs=33.8
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLS 124 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~ 124 (535)
..+|+|||+|++|+.+|+.+...+.+|+|+||.+..+
T Consensus 41 ~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~G 77 (510)
T 4at0_A 41 EADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWG 77 (510)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 4799999999999999999988899999999998654
No 348
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=94.93 E-value=0.022 Score=59.08 Aligned_cols=39 Identities=10% Similarity=-0.055 Sum_probs=34.7
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccccc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFR 126 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~ 126 (535)
..+|+|||+|.+|+++|..+...+.+|+|+|+.+.+++.
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~ 43 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGR 43 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCc
Confidence 468999999999999999888889999999999877654
No 349
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=94.89 E-value=0.018 Score=59.03 Aligned_cols=38 Identities=16% Similarity=0.116 Sum_probs=33.6
Q ss_pred EEEEeeCCccHHHHHHHHHhhCC-CeEEEEecCCccccc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQ-RRDELQERGSHLSFR 126 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~-~~V~lie~~~~~~~~ 126 (535)
.+|+|||+|.+|+++|..+...+ .+|+|+|+.+.+++.
T Consensus 7 ~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~ 45 (424)
T 2b9w_A 7 SRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGK 45 (424)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTT
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCc
Confidence 46899999999999999888888 899999999887654
No 350
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=94.78 E-value=0.018 Score=58.33 Aligned_cols=34 Identities=12% Similarity=-0.033 Sum_probs=30.4
Q ss_pred EEEeeCCccHHHHHHHHHhhC--CCeEEEEecCCcc
Q psy14461 90 YLDRIGDEGILLEEELKRQTN--QRRDELQERGSHL 123 (535)
Q Consensus 90 ~v~iiG~G~aG~~~al~~~~~--~~~V~lie~~~~~ 123 (535)
+|+|||+|++|+.+|+.+... +.+|+|+|+.+..
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 689999999999999988776 8999999998754
No 351
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=94.76 E-value=0.018 Score=59.98 Aligned_cols=57 Identities=14% Similarity=-0.014 Sum_probs=43.6
Q ss_pred HHHHHHHHHhhhcCCeEE-cceEEEEEEEeC-CCcE-EEEEecCCCCCceEEEcCEEEEccCCCCC
Q psy14461 281 QEMVRILLSSLTKAGVSI-QCCVIEKVISSF-DGMK-GVRGFHPESKEPFADVFKTVVNAMEKKFD 343 (535)
Q Consensus 281 ~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~-~~~~-~v~~~~~~~G~~~~~~~D~vi~a~G~~p~ 343 (535)
..+.+.+.+.+++.|+++ +++.|++|..+. ++++ .|.. +|+ ++.+|.||+++|..|.
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~----~g~--~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT----KLG--TFKAPLVIADPTYFPE 301 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE----TTE--EEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE----CCe--EEECCEEEECCCccch
Confidence 357777888888899999 999999998651 2443 3443 565 7999999999987754
No 352
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=94.70 E-value=0.028 Score=56.78 Aligned_cols=38 Identities=8% Similarity=-0.068 Sum_probs=33.8
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccccc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFR 126 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~ 126 (535)
++++|||+|.+|+.+|.++...+.+|+|+|+++.+++.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~ 39 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGN 39 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGG
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcc
Confidence 57899999999999999988888999999999876554
No 353
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=94.70 E-value=0.034 Score=45.59 Aligned_cols=47 Identities=17% Similarity=0.282 Sum_probs=38.5
Q ss_pred ChhHHHHhhhcCCcEEEEeCCCchhhHHHHHHHHHhcCCcceEEEEEe
Q psy14461 46 TPPAYISRLSYENRILIFTHAVLREENARAERYLNARGDRFAVLYLDR 93 (535)
Q Consensus 46 ~l~~~~~~~i~~~~v~v~~k~~cp~~~~~~k~~~~~~~~~~~~~~v~i 93 (535)
.+..++..+++.++|++|..++|| +|.+++..+.+.+.++.+++++.
T Consensus 8 ~~~~~~~~~~~~~~vv~f~a~~C~-~C~~~~~~l~~~~~~~~~v~v~~ 54 (116)
T 2e7p_A 8 AALKKAKELASSAPVVVFSKTYCG-YCNRVKQLLTQVGASYKVVELDE 54 (116)
T ss_dssp HHHHHHHHHHTSSSEEEEECTTCH-HHHHHHHHHHHHTCCCEEEEGGG
T ss_pred HHHHHHHHHHcCCCEEEEECCCCh-hHHHHHHHHHHcCCCeEEEEccC
Confidence 455677788888999999999999 99999999999888776555543
No 354
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=94.70 E-value=0.026 Score=58.85 Aligned_cols=53 Identities=19% Similarity=0.130 Sum_probs=41.1
Q ss_pred HHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCC
Q psy14461 282 EMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEK 340 (535)
Q Consensus 282 ~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~ 340 (535)
.+.+.+.+.+++.|+++ +++.|++|+.++++.+.|+. +|. ++.+|.||+|++.
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~----~~~--~~~ad~vv~a~p~ 288 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSL----RDS--SLEADHVISAIPA 288 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEEC----SSC--EEEESEEEECSCH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEE----CCe--EEEcCEEEECCCH
Confidence 46777788888889999 99999999876322256654 455 6999999999975
No 355
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=94.67 E-value=0.019 Score=59.66 Aligned_cols=38 Identities=13% Similarity=-0.030 Sum_probs=33.3
Q ss_pred EEEEeeCCccHHHHHHHHHhhCC------CeEEEEecCCccccc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQ------RRDELQERGSHLSFR 126 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~------~~V~lie~~~~~~~~ 126 (535)
.+|+|||+|.+|+++|..+...+ .+|+|+|+.+.+++.
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~ 49 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGK 49 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTT
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCce
Confidence 67899999999999999887777 899999999877554
No 356
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=94.66 E-value=0.029 Score=57.28 Aligned_cols=39 Identities=10% Similarity=-0.060 Sum_probs=34.4
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccccc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFR 126 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~ 126 (535)
.++++|||+|.+|+.+|..+...+.+|+|+|+.+.+++.
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~ 67 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGN 67 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGG
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCc
Confidence 478999999999999999888889999999999877544
No 357
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=94.66 E-value=0.021 Score=59.09 Aligned_cols=34 Identities=15% Similarity=0.149 Sum_probs=30.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 239 AWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 239 ~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
+..++|+|||||+.|+-+|..|++.|.+|+|+++
T Consensus 20 ~m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~ 53 (430)
T 3ihm_A 20 HMKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTD 53 (430)
T ss_dssp ---CEEEEECCHHHHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcC
Confidence 3446899999999999999999999999999998
No 358
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=94.56 E-value=0.029 Score=58.80 Aligned_cols=38 Identities=13% Similarity=-0.011 Sum_probs=34.0
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccccc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFR 126 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~ 126 (535)
.+|+|||+|.+|+.+|..+...+.+|+|+|+.+.+++.
T Consensus 12 ~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~ 49 (489)
T 2jae_A 12 HSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGR 49 (489)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCc
Confidence 57899999999999999988888999999999877554
No 359
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=94.54 E-value=0.023 Score=60.12 Aligned_cols=38 Identities=8% Similarity=-0.114 Sum_probs=33.9
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccccc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFR 126 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~ 126 (535)
.+|+|||+|.+|+++|..+...+.+|+|+|+++.+++.
T Consensus 5 ~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr 42 (520)
T 1s3e_A 5 CDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGR 42 (520)
T ss_dssp CSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTT
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCc
Confidence 46899999999999999888888999999999987655
No 360
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=94.48 E-value=0.026 Score=58.29 Aligned_cols=33 Identities=9% Similarity=-0.045 Sum_probs=30.7
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCC
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGS 121 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~ 121 (535)
.+|+|||+|++|+.+|+.+...+.+|+|+|+.+
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 468999999999999999999999999999986
No 361
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=94.46 E-value=0.033 Score=56.43 Aligned_cols=38 Identities=11% Similarity=-0.102 Sum_probs=33.7
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecC-Cccccc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERG-SHLSFR 126 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~-~~~~~~ 126 (535)
.+|+|||+|.+|+.+|..+...+.+|+|+|+. +.+++.
T Consensus 45 ~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr 83 (376)
T 2e1m_A 45 KRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGR 83 (376)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTT
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCc
Confidence 57899999999999999888888999999999 776554
No 362
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=94.41 E-value=0.033 Score=58.44 Aligned_cols=55 Identities=16% Similarity=0.224 Sum_probs=44.2
Q ss_pred HHHHHHHHHhhhcCC-eEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCC
Q psy14461 281 QEMVRILLSSLTKAG-VSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKK 341 (535)
Q Consensus 281 ~~~~~~~~~~l~~~g-V~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~ 341 (535)
..+.+.+.+.+++.| +++ +++.|++|+.. ++.+.|++ .+|+ ++.+|.||+|+|..
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~-~~~v~v~~---~~g~--~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNE-RDAARVTA---RDGR--EFVAKRVVCTIPLN 311 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEEC-SSSEEEEE---TTCC--EEEEEEEEECCCGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEc-CCEEEEEE---CCCC--EEEcCEEEECCCHH
Confidence 456777788888888 999 99999999876 45677776 3676 79999999999853
No 363
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=94.29 E-value=0.024 Score=57.94 Aligned_cols=39 Identities=21% Similarity=0.122 Sum_probs=33.8
Q ss_pred EEEEeeCCccHHHHHHHHHhhC-CCeEEEEecCCcccccc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTN-QRRDELQERGSHLSFRK 127 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~-~~~V~lie~~~~~~~~~ 127 (535)
++++|||+|.+|+.+|..+... +.+|+|+|+++.+++..
T Consensus 8 ~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~ 47 (399)
T 1v0j_A 8 FDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNA 47 (399)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGG
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCee
Confidence 4689999999999999888776 88999999999876553
No 364
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=94.24 E-value=0.035 Score=57.18 Aligned_cols=57 Identities=5% Similarity=-0.064 Sum_probs=45.8
Q ss_pred cHHHHHHHHHhhhcCCeEE-cce---EEEEEEEeCCCcEE-EEEecCCCCCceEEEcCEEEEccCCCC
Q psy14461 280 DQEMVRILLSSLTKAGVSI-QCC---VIEKVISSFDGMKG-VRGFHPESKEPFADVFKTVVNAMEKKF 342 (535)
Q Consensus 280 ~~~~~~~~~~~l~~~gV~i-~~~---~v~~i~~~~~~~~~-v~~~~~~~G~~~~~~~D~vi~a~G~~p 342 (535)
...+...+.+.+++.|+++ .++ +|++|..+ ++.+. |++ .+|+ ++.+|.||+|+|...
T Consensus 160 ~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~-~~~v~gV~t---~~G~--~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFE-NNDVKGAVT---ADGK--IWRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEE-TTEEEEEEE---TTTE--EEECSEEEECCGGGG
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEec-CCeEEEEEE---CCCC--EEECCEEEECCCCCh
Confidence 3567778888888899999 999 99999876 56665 766 3675 799999999999753
No 365
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=94.17 E-value=0.032 Score=58.62 Aligned_cols=37 Identities=22% Similarity=0.269 Sum_probs=33.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCC
Q psy14461 240 WPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLL 276 (535)
Q Consensus 240 ~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l 276 (535)
.+++|+|||||.+|+.+|..|++.|.+|+|+++ +++.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~g 69 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPG 69 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSB
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCC
Confidence 357899999999999999999999999999998 6654
No 366
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.05 E-value=0.038 Score=45.45 Aligned_cols=46 Identities=15% Similarity=0.083 Sum_probs=34.1
Q ss_pred CcEEEEeCCCchhhHH------HHHHHHHhcCCcceEEEEEeeCCccHHHHHHHHHh
Q psy14461 58 NRILIFTHAVLREENA------RAERYLNARGDRFAVLYLDRIGDEGILLEEELKRQ 108 (535)
Q Consensus 58 ~~v~v~~k~~cp~~~~------~~k~~~~~~~~~~~~~~v~iiG~G~aG~~~al~~~ 108 (535)
.+|++|++++|| +|. +++.++.+.+.+++.++|. .. +. ....+...
T Consensus 8 m~V~vy~~~~C~-~C~~~~~~~~ak~~L~~~gi~y~~vdI~--~~-~~-~~~~l~~~ 59 (111)
T 2ct6_A 8 MVIRVFIASSSG-FVAIKKKQQDVVRFLEANKIEFEEVDIT--MS-EE-QRQWMYKN 59 (111)
T ss_dssp CCEEEEECSSCS-CHHHHHHHHHHHHHHHHTTCCEEEEETT--TC-HH-HHHHHHHS
T ss_pred cEEEEEEcCCCC-CcccchhHHHHHHHHHHcCCCEEEEECC--CC-HH-HHHHHHHH
Confidence 368999999999 999 8999999999876554443 22 44 55556554
No 367
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=94.04 E-value=0.037 Score=57.74 Aligned_cols=38 Identities=13% Similarity=0.037 Sum_probs=34.0
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccccc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFR 126 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~ 126 (535)
.+|+|||+|.+|+.+|..+...+.+|+|+|+.+.+++.
T Consensus 17 ~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr 54 (478)
T 2ivd_A 17 MNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGA 54 (478)
T ss_dssp CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCce
Confidence 46899999999999999888889999999999987654
No 368
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.99 E-value=0.065 Score=46.72 Aligned_cols=35 Identities=17% Similarity=0.112 Sum_probs=31.5
Q ss_pred cCCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 238 GAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 238 ~~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
....++|+|+|+|.+|..+|..|.+.|.+|+++++
T Consensus 16 ~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~ 50 (155)
T 2g1u_A 16 KQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDK 50 (155)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEEC
Confidence 34467899999999999999999999999999987
No 369
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=93.99 E-value=0.048 Score=58.26 Aligned_cols=36 Identities=11% Similarity=-0.028 Sum_probs=32.7
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHL 123 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~ 123 (535)
..+|+|||+|++|+.+|+.+...+.+|+|+|+.+..
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~ 61 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGT 61 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 478999999999999999998899999999998754
No 370
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=93.96 E-value=0.038 Score=54.77 Aligned_cols=37 Identities=14% Similarity=-0.023 Sum_probs=32.3
Q ss_pred EEEEEeeCCccHHHHHHHHHhhC--CCeEEEEecCCccc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTN--QRRDELQERGSHLS 124 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~--~~~V~lie~~~~~~ 124 (535)
..+|+|||+|++|+.+|+.+... +.+|+|+|+.+..+
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~g 103 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccc
Confidence 46899999999999999988766 89999999987654
No 371
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=93.89 E-value=0.052 Score=55.04 Aligned_cols=31 Identities=42% Similarity=0.443 Sum_probs=29.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
++|+|||||..|+++|..+++.|.+|+++++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~ 32 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEM 32 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEec
Confidence 4799999999999999999999999999987
No 372
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=93.88 E-value=0.049 Score=55.33 Aligned_cols=38 Identities=5% Similarity=-0.103 Sum_probs=33.6
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccccc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFR 126 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~ 126 (535)
++++|||+|.+|+.+|..+...+.+|+|+|+++.+++.
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~ 41 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGN 41 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCc
Confidence 47899999999999999888888999999999877644
No 373
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=93.82 E-value=0.036 Score=43.49 Aligned_cols=35 Identities=20% Similarity=0.527 Sum_probs=30.2
Q ss_pred cEEEEeCCCchhhHHHHHHHHHhcCCcceEEEEEee
Q psy14461 59 RILIFTHAVLREENARAERYLNARGDRFAVLYLDRI 94 (535)
Q Consensus 59 ~v~v~~k~~cp~~~~~~k~~~~~~~~~~~~~~v~ii 94 (535)
+|.+|+.++|| +|.+++.++...+.+++.++|...
T Consensus 13 ~v~ly~~~~Cp-~C~~~~~~L~~~gi~~~~~~v~~~ 47 (92)
T 3ic4_A 13 EVLMYGLSTCP-HCKRTLEFLKREGVDFEVIWIDKL 47 (92)
T ss_dssp SSEEEECTTCH-HHHHHHHHHHHHTCCCEEEEGGGC
T ss_pred eEEEEECCCCh-HHHHHHHHHHHcCCCcEEEEeeeC
Confidence 58899999999 999999999999988877766543
No 374
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=93.81 E-value=0.057 Score=57.88 Aligned_cols=35 Identities=23% Similarity=0.029 Sum_probs=32.4
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSH 122 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~ 122 (535)
.++|+|||+|.+|+.+|+.+...+.+|+|+|+++.
T Consensus 18 ~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~ 52 (561)
T 3da1_A 18 QLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDF 52 (561)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSST
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 37999999999999999999999999999999864
No 375
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=93.81 E-value=0.05 Score=54.51 Aligned_cols=33 Identities=15% Similarity=0.016 Sum_probs=30.6
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCC
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGS 121 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~ 121 (535)
.+|+|||+|.+|+++|+.+...+.+|+|+|+..
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 578999999999999999888899999999976
No 376
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=93.79 E-value=0.043 Score=56.30 Aligned_cols=33 Identities=30% Similarity=0.476 Sum_probs=30.7
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcC
Q psy14461 243 KTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRL 275 (535)
Q Consensus 243 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~ 275 (535)
+|+|||||..|+-+|..|++.|.+|+|+++ +.+
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERL 36 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCc
Confidence 699999999999999999999999999998 654
No 377
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=93.68 E-value=0.059 Score=55.20 Aligned_cols=35 Identities=11% Similarity=0.198 Sum_probs=32.1
Q ss_pred CCcEEEECCChHHHHHHHHHHhCC-CcEEEEEc-CcC
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLG-VPVTLVYS-RRL 275 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g-~~Vtlv~~-~~~ 275 (535)
..+|+|||||..|+-+|..|++.| .+|+++++ +++
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHV 42 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCC
Confidence 468999999999999999999999 89999998 655
No 378
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=93.68 E-value=0.051 Score=58.58 Aligned_cols=36 Identities=14% Similarity=0.034 Sum_probs=32.6
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHL 123 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~ 123 (535)
..+|+|||+|.+|+.+|+.+...+.+|+|+||....
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~ 42 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPT 42 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 478999999999999999998889999999998754
No 379
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=93.67 E-value=0.046 Score=57.43 Aligned_cols=35 Identities=26% Similarity=0.162 Sum_probs=30.9
Q ss_pred CcEEEECCChHHHHHHHHHHh-CCCcEEEEEc-CcCC
Q psy14461 242 GKTLVLGGSLMAVEIAATLNF-LGVPVTLVYS-RRLL 276 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~-~g~~Vtlv~~-~~~l 276 (535)
-.|+|||||.+|+-+|..|++ .|.+|+|+++ +++.
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~G 47 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPG 47 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCC
T ss_pred CCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCc
Confidence 369999999999999999987 5999999998 7653
No 380
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=93.66 E-value=0.056 Score=56.80 Aligned_cols=38 Identities=13% Similarity=-0.033 Sum_probs=34.0
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccccc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFR 126 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~ 126 (535)
.+|+|||+|.+|+.+|..+...+.+|+|+|+.+.+++.
T Consensus 14 ~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~ 51 (504)
T 1sez_A 14 KRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGK 51 (504)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSS
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCc
Confidence 57899999999999999988889999999999987554
No 381
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=93.64 E-value=0.035 Score=55.35 Aligned_cols=34 Identities=15% Similarity=-0.028 Sum_probs=29.3
Q ss_pred EEEEeeCCccHHHHHHHHHhhCC------CeEEEEecCCc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQ------RRDELQERGSH 122 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~------~~V~lie~~~~ 122 (535)
++|+|||+|.+|+++|+.+...+ .+|+|+|++..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 37899999999999998777665 89999999863
No 382
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=93.58 E-value=0.046 Score=57.26 Aligned_cols=35 Identities=29% Similarity=0.302 Sum_probs=32.0
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcC
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRL 275 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~ 275 (535)
..+|+|||+|..|+-+|..|++.|.+|+|+++ +++
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 46 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRP 46 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCC
Confidence 46899999999999999999999999999998 654
No 383
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=93.57 E-value=0.06 Score=57.52 Aligned_cols=58 Identities=17% Similarity=0.085 Sum_probs=43.3
Q ss_pred HHHHHHHHHhhhcC-CeEE-cceEEEEEEEeCCCc-EEEEEecCCCCCceEEEcCEEEEccCCCCCC
Q psy14461 281 QEMVRILLSSLTKA-GVSI-QCCVIEKVISSFDGM-KGVRGFHPESKEPFADVFKTVVNAMEKKFDF 344 (535)
Q Consensus 281 ~~~~~~~~~~l~~~-gV~i-~~~~v~~i~~~~~~~-~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~~ 344 (535)
..+.+.+.+.+++. ||++ .+ +|+++..++++. +.|++ .+|+ ++.+|.||.|+|..+..
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~---~~G~--~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRT---ATGR--VFDADLFVDCSGFRGLL 254 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEE---TTSC--EEECSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEE---CCCC--EEECCEEEECCCCchhh
Confidence 45677777878777 9999 88 899997653333 34555 3676 79999999999987654
No 384
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=93.56 E-value=0.055 Score=58.67 Aligned_cols=35 Identities=9% Similarity=-0.078 Sum_probs=32.0
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSH 122 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~ 122 (535)
..+|+|||+|++|+.+|+.+...+.+|+|+||...
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~ 52 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFP 52 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCG
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 46899999999999999999888999999999864
No 385
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=93.56 E-value=0.049 Score=57.80 Aligned_cols=34 Identities=9% Similarity=-0.186 Sum_probs=30.2
Q ss_pred EEEEeeCCccHHHHHHHHHhh------------CCCeEEEEecCCc
Q psy14461 89 LYLDRIGDEGILLEEELKRQT------------NQRRDELQERGSH 122 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~------------~~~~V~lie~~~~ 122 (535)
.+|+|||+|++|+.+|+.+.. .+.+|+|||+.+.
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~ 53 (526)
T 2pyx_A 8 TEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDV 53 (526)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCC
Confidence 578999999999999987777 7899999999764
No 386
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=93.49 E-value=0.054 Score=59.58 Aligned_cols=58 Identities=12% Similarity=0.103 Sum_probs=44.7
Q ss_pred cHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCC
Q psy14461 280 DQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKF 342 (535)
Q Consensus 280 ~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p 342 (535)
+..+...+.+.+++.|+++ .+++|+++..+ ++.+.|++. +|+ .++.+|.||+|+|...
T Consensus 411 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~-~~~v~V~t~---~G~-~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 411 PSDLTHALMMLAQQNGMTCHYQHELQRLKRI-DSQWQLTFG---QSQ-AAKHHATVILATGHRL 469 (689)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEC-SSSEEEEEC----CC-CCEEESEEEECCGGGT
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeEeEEEEe-CCeEEEEeC---CCc-EEEECCEEEECCCcch
Confidence 4567777888888899999 99999999876 455666663 442 1489999999999764
No 387
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=93.46 E-value=0.06 Score=53.90 Aligned_cols=31 Identities=23% Similarity=0.360 Sum_probs=29.7
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
.+|+|||||.+|+-+|..|++.|.+|+++++
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~ 37 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILARKGYSVHILAR 37 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCEEEEEec
Confidence 5799999999999999999999999999997
No 388
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=93.43 E-value=0.081 Score=40.18 Aligned_cols=48 Identities=23% Similarity=0.368 Sum_probs=34.0
Q ss_pred cEEEEeCCCchhhHHHHHHHHHhcCCcceEEEEEeeCCccHHHHHHHHHhhCC
Q psy14461 59 RILIFTHAVLREENARAERYLNARGDRFAVLYLDRIGDEGILLEEELKRQTNQ 111 (535)
Q Consensus 59 ~v~v~~k~~cp~~~~~~k~~~~~~~~~~~~~~v~iiG~G~aG~~~al~~~~~~ 111 (535)
++.+|++++|| +|.+++.++.+.+.++..+++. .++. ....+....+.
T Consensus 2 ~i~~y~~~~C~-~C~~~~~~l~~~~i~~~~~~i~---~~~~-~~~~~~~~~~~ 49 (82)
T 1fov_A 2 NVEIYTKETCP-YCHRAKALLSSKGVSFQELPID---GNAA-KREEMIKRSGR 49 (82)
T ss_dssp CEEEEECSSCH-HHHHHHHHHHHHTCCCEEEECT---TCSH-HHHHHHHHHSS
T ss_pred cEEEEECCCCh-hHHHHHHHHHHCCCCcEEEECC---CCHH-HHHHHHHHhCC
Confidence 57889999999 9999999999998877655543 3344 44445444433
No 389
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=93.39 E-value=0.05 Score=56.64 Aligned_cols=34 Identities=32% Similarity=0.404 Sum_probs=31.4
Q ss_pred CcEEEECCChHHHHHHHHHHhCCC--cEEEEEc-CcC
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGV--PVTLVYS-RRL 275 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~--~Vtlv~~-~~~ 275 (535)
++|+|||||.+|+-+|..|++.|. +|+|+++ +++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERL 39 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 579999999999999999999999 9999998 654
No 390
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=93.36 E-value=0.046 Score=57.70 Aligned_cols=34 Identities=12% Similarity=-0.023 Sum_probs=28.5
Q ss_pred EEEEeeCCccHHHHHHHHHhh---CCCeEEEEecCCc
Q psy14461 89 LYLDRIGDEGILLEEELKRQT---NQRRDELQERGSH 122 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~---~~~~V~lie~~~~ 122 (535)
.+|+|||+|++|+.+|+.+.. .+.+|+|+|+.+.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCC
Confidence 478999999999999988877 8899999999763
No 391
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=93.32 E-value=0.062 Score=55.99 Aligned_cols=38 Identities=18% Similarity=0.030 Sum_probs=33.0
Q ss_pred EEEEeeCCccHHHHHHHHHhhCC--CeEEEEecCCccccc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQ--RRDELQERGSHLSFR 126 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~--~~V~lie~~~~~~~~ 126 (535)
.+|+|||+|.+|+++|..+...+ .+|+|+|+.+.+++.
T Consensus 5 ~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~ 44 (475)
T 3lov_A 5 KRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGK 44 (475)
T ss_dssp CEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTT
T ss_pred ccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCce
Confidence 47899999999999999887777 999999998876543
No 392
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=93.29 E-value=0.061 Score=56.42 Aligned_cols=39 Identities=10% Similarity=-0.090 Sum_probs=34.0
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccccc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFR 126 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~ 126 (535)
..+|+|||+|.+|+.+|..+...+.+|+|+|+.+.+++.
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~ 71 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGR 71 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCc
Confidence 357899999999999999888888999999999877554
No 393
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=93.27 E-value=0.06 Score=53.19 Aligned_cols=35 Identities=11% Similarity=0.139 Sum_probs=30.3
Q ss_pred CCcEEEECCChHHHHHHHHHH--hCCCcEEEEEc-CcC
Q psy14461 241 PGKTLVLGGSLMAVEIAATLN--FLGVPVTLVYS-RRL 275 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~--~~g~~Vtlv~~-~~~ 275 (535)
...|+|||+|+.|+-+|..|+ +.|.+|+++++ +.+
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~ 102 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCC
Confidence 357999999999999999996 45999999998 654
No 394
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=93.25 E-value=0.065 Score=55.72 Aligned_cols=35 Identities=17% Similarity=0.164 Sum_probs=32.4
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCC
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLL 276 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l 276 (535)
.+|+|||+|..|+-+|..|++.|.+|+++++ +.+.
T Consensus 12 ~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~G 47 (453)
T 2bcg_G 12 YDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYG 47 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 5799999999999999999999999999999 7664
No 395
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=93.25 E-value=0.061 Score=55.61 Aligned_cols=55 Identities=15% Similarity=0.018 Sum_probs=42.4
Q ss_pred cHHHHHHHHHhhhcCCeEE-cceEEEEEEE---------------eCCCcE-EEEEecCCCCCceEE--EcCEEEEccCC
Q psy14461 280 DQEMVRILLSSLTKAGVSI-QCCVIEKVIS---------------SFDGMK-GVRGFHPESKEPFAD--VFKTVVNAMEK 340 (535)
Q Consensus 280 ~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~---------------~~~~~~-~v~~~~~~~G~~~~~--~~D~vi~a~G~ 340 (535)
...+...+.+.+++.|+++ .+++|+++.. . ++.+ .|.+ .+| ++ .+|.||+|+|.
T Consensus 180 ~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~-~~~v~~V~t---~~g---~i~~~Ad~VV~AtG~ 252 (448)
T 3axb_A 180 AEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQ-EARASAAVL---SDG---TRVEVGEKLVVAAGV 252 (448)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTS-CEEEEEEEE---TTS---CEEEEEEEEEECCGG
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccC-CCceEEEEe---CCC---EEeecCCEEEECCCc
Confidence 3477788888888999999 9999999986 3 3443 3554 356 47 99999999996
Q ss_pred C
Q psy14461 341 K 341 (535)
Q Consensus 341 ~ 341 (535)
.
T Consensus 253 ~ 253 (448)
T 3axb_A 253 W 253 (448)
T ss_dssp G
T ss_pred C
Confidence 4
No 396
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=93.11 E-value=0.093 Score=41.03 Aligned_cols=48 Identities=21% Similarity=0.306 Sum_probs=34.4
Q ss_pred CcEEEEeCCCchhhHHHHHHHHHhcCCcceEEEEEeeCCccHHHHHHHHHhhC
Q psy14461 58 NRILIFTHAVLREENARAERYLNARGDRFAVLYLDRIGDEGILLEEELKRQTN 110 (535)
Q Consensus 58 ~~v~v~~k~~cp~~~~~~k~~~~~~~~~~~~~~v~iiG~G~aG~~~al~~~~~ 110 (535)
+++.+|++++|| +|.+++.++.+.+.+++.+++. ..+. ....+....+
T Consensus 6 ~~v~ly~~~~C~-~C~~~~~~L~~~~i~~~~~di~---~~~~-~~~~l~~~~~ 53 (92)
T 2khp_A 6 VDVIIYTRPGCP-YCARAKALLARKGAEFNEIDAS---ATPE-LRAEMQERSG 53 (92)
T ss_dssp CCEEEEECTTCH-HHHHHHHHHHHTTCCCEEEEST---TSHH-HHHHHHHHHT
T ss_pred ccEEEEECCCCh-hHHHHHHHHHHcCCCcEEEECC---CCHH-HHHHHHHHhC
Confidence 368899999999 9999999999998877655543 2233 4555544433
No 397
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=93.10 E-value=0.078 Score=43.79 Aligned_cols=32 Identities=6% Similarity=0.140 Sum_probs=27.7
Q ss_pred EEEEeCCCchhhHHHHHHHHHhcCCcceEEEEE
Q psy14461 60 ILIFTHAVLREENARAERYLNARGDRFAVLYLD 92 (535)
Q Consensus 60 v~v~~k~~cp~~~~~~k~~~~~~~~~~~~~~v~ 92 (535)
|.+|+++.|| +|.++++++.+.|..++++++.
T Consensus 2 i~iY~~~~C~-~C~kak~~L~~~gi~~~~~di~ 33 (114)
T 1rw1_A 2 YVLYGIKACD-TMKKARTWLDEHKVAYDFHDYK 33 (114)
T ss_dssp EEEEECSSCH-HHHHHHHHHHHTTCCEEEEEHH
T ss_pred EEEEECCCCh-HHHHHHHHHHHCCCceEEEeec
Confidence 6789999999 9999999999999887665554
No 398
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=93.05 E-value=0.069 Score=56.44 Aligned_cols=34 Identities=24% Similarity=0.395 Sum_probs=31.5
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcC
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRL 275 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~ 275 (535)
.+|+|||||..|+-+|..|++.|.+|+|+++ +++
T Consensus 5 ~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~ 39 (520)
T 1s3e_A 5 CDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRV 39 (520)
T ss_dssp CSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 5799999999999999999999999999998 654
No 399
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=92.94 E-value=0.051 Score=53.94 Aligned_cols=76 Identities=12% Similarity=0.012 Sum_probs=55.0
Q ss_pred CCcEEEECCChHHHH-HHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEE
Q psy14461 241 PGKTLVLGGSLMAVE-IAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVR 317 (535)
Q Consensus 241 ~k~vvViGgG~~g~e-~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~ 317 (535)
.++|.|||.|-+|+. +|..|.++|.+|++.+. +.. + ..+.|++.||++ .+...
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~-~---------~~~~L~~~gi~v~~g~~~-------------- 59 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYP-P---------MSTQLEALGIDVYEGFDA-------------- 59 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCT-T---------HHHHHHHTTCEEEESCCG--------------
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCc-H---------HHHHHHhCCCEEECCCCH--------------
Confidence 578999999999996 88999999999999997 431 1 124466678877 43210
Q ss_pred EecCCCCCceE-EEcCEEEEccCCCCCCCCC
Q psy14461 318 GFHPESKEPFA-DVFKTVVNAMEKKFDFAAL 347 (535)
Q Consensus 318 ~~~~~~G~~~~-~~~D~vi~a~G~~p~~~~l 347 (535)
+... ..+|.|+++.|..|+.+.+
T Consensus 60 -------~~l~~~~~d~vV~Spgi~~~~p~~ 83 (326)
T 3eag_A 60 -------AQLDEFKADVYVIGNVAKRGMDVV 83 (326)
T ss_dssp -------GGGGSCCCSEEEECTTCCTTCHHH
T ss_pred -------HHcCCCCCCEEEECCCcCCCCHHH
Confidence 0001 2479999999999887654
No 400
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=92.89 E-value=0.072 Score=56.33 Aligned_cols=33 Identities=21% Similarity=0.387 Sum_probs=30.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCC-CcEEEEEc-Cc
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLG-VPVTLVYS-RR 274 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g-~~Vtlv~~-~~ 274 (535)
.+|+|||||..|+-+|..|++.| .+|+|+++ ++
T Consensus 9 ~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~r 43 (516)
T 1rsg_A 9 KKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDR 43 (516)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCC
Confidence 57999999999999999999999 99999987 54
No 401
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=92.72 E-value=0.16 Score=54.57 Aligned_cols=35 Identities=11% Similarity=-0.085 Sum_probs=30.9
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCC-CeEEEEecCCc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQ-RRDELQERGSH 122 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~-~~V~lie~~~~ 122 (535)
.+|++|||+|.||+..|.++...+ .+|+|+|++..
T Consensus 6 ~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 6 HFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp EEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 479999999999999999887655 79999999875
No 402
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=92.69 E-value=0.081 Score=55.10 Aligned_cols=35 Identities=29% Similarity=0.383 Sum_probs=31.6
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcC
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRL 275 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~ 275 (535)
..+|+|||+|..|+-+|..|++.|.+|+|+++ +++
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~ 51 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARL 51 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCC
Confidence 46899999999999999999999999999998 654
No 403
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=92.67 E-value=0.041 Score=57.00 Aligned_cols=34 Identities=21% Similarity=0.323 Sum_probs=31.2
Q ss_pred CcEEEECCChHHHHHHHHHHhCC------CcEEEEEc-CcC
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLG------VPVTLVYS-RRL 275 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g------~~Vtlv~~-~~~ 275 (535)
++|+|||||.+|+-+|..|++.| .+|+|+++ +++
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~ 46 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRV 46 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCC
Confidence 57999999999999999999999 99999998 554
No 404
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=92.61 E-value=0.066 Score=57.06 Aligned_cols=35 Identities=17% Similarity=0.073 Sum_probs=31.4
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHL 123 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~ 123 (535)
..+|+|||+|++|+.+|+.+.. +.+|+|+||....
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~ 42 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVT 42 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTT
T ss_pred CCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCC
Confidence 3578999999999999999988 9999999998754
No 405
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=92.55 E-value=0.092 Score=54.25 Aligned_cols=34 Identities=18% Similarity=0.337 Sum_probs=31.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcC
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRL 275 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~ 275 (535)
.+|+|||+|..|+-+|..|++.|.+|+|+++ +.+
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 40 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRV 40 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 4799999999999999999999999999998 654
No 406
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=92.51 E-value=0.091 Score=57.49 Aligned_cols=35 Identities=9% Similarity=-0.064 Sum_probs=31.5
Q ss_pred EEEEEeeCCccHHHHHHHHHhh-----CCCeEEEEecCCc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQT-----NQRRDELQERGSH 122 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~-----~~~~V~lie~~~~ 122 (535)
.++|+|||+|++|+.+|+.+.. .+.+|+|||+.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 4789999999999999998888 8999999999764
No 407
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=92.50 E-value=0.12 Score=39.23 Aligned_cols=31 Identities=26% Similarity=0.384 Sum_probs=26.0
Q ss_pred cEEEEeCCCchhhHHHHHHHHHhcCCcceEEE
Q psy14461 59 RILIFTHAVLREENARAERYLNARGDRFAVLY 90 (535)
Q Consensus 59 ~v~v~~k~~cp~~~~~~k~~~~~~~~~~~~~~ 90 (535)
++.+|+.++|| +|.+++.++.+.+.++..++
T Consensus 2 ~v~~f~~~~C~-~C~~~~~~l~~~~i~~~~vd 32 (81)
T 1h75_A 2 RITIYTRNDCV-QCHATKRAMENRGFDFEMIN 32 (81)
T ss_dssp CEEEEECTTCH-HHHHHHHHHHHTTCCCEEEE
T ss_pred EEEEEcCCCCh-hHHHHHHHHHHCCCCeEEEE
Confidence 47889999999 99999999999887765443
No 408
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=92.44 E-value=0.097 Score=54.93 Aligned_cols=38 Identities=13% Similarity=-0.080 Sum_probs=32.7
Q ss_pred EEEEeeCCccHHHHHHHHHhhCC-CeEEEEecCCccccc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQ-RRDELQERGSHLSFR 126 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~-~~V~lie~~~~~~~~ 126 (535)
.+++|||+|.+|+.+|..+...+ .+|+|+|+.+.+++.
T Consensus 10 ~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~ 48 (484)
T 4dsg_A 10 PKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGL 48 (484)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGG
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCe
Confidence 46799999999999999887776 799999999877554
No 409
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=92.44 E-value=0.11 Score=52.80 Aligned_cols=34 Identities=21% Similarity=0.322 Sum_probs=31.4
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcC
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRL 275 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~ 275 (535)
.+|+|||+|.+|+.+|..|++.|.+|+++++ +++
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 38 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHI 38 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCc
Confidence 4799999999999999999999999999998 655
No 410
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=92.37 E-value=0.091 Score=53.16 Aligned_cols=33 Identities=21% Similarity=0.393 Sum_probs=30.9
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEEcC
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYSR 273 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~ 273 (535)
+.+|+|||+|..|+-+|..|++.|.+|+|+++.
T Consensus 44 ~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~ 76 (376)
T 2e1m_A 44 PKRILIVGAGIAGLVAGDLLTRAGHDVTILEAN 76 (376)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTSCEEEEECSC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 568999999999999999999999999999874
No 411
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=92.36 E-value=0.21 Score=42.40 Aligned_cols=33 Identities=12% Similarity=0.149 Sum_probs=28.2
Q ss_pred cEEEEeCCCchhhHHHHHHHHHhcCCcceEEEEE
Q psy14461 59 RILIFTHAVLREENARAERYLNARGDRFAVLYLD 92 (535)
Q Consensus 59 ~v~v~~k~~cp~~~~~~k~~~~~~~~~~~~~~v~ 92 (535)
.|.+|+++.|| +|.+++.++.+.|.+++++++.
T Consensus 2 mi~lY~~~~C~-~C~ka~~~L~~~gi~y~~~di~ 34 (132)
T 1z3e_A 2 MVTLYTSPSCT-SCRKARAWLEEHEIPFVERNIF 34 (132)
T ss_dssp CEEEEECTTCH-HHHHHHHHHHHTTCCEEEEETT
T ss_pred eEEEEeCCCCh-HHHHHHHHHHHcCCceEEEEcc
Confidence 37789999999 9999999999999887665554
No 412
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=92.35 E-value=0.13 Score=53.60 Aligned_cols=56 Identities=9% Similarity=-0.002 Sum_probs=43.4
Q ss_pred HHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcE-EEEEecCCCCCceEEEcCEEEEccCCC
Q psy14461 281 QEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMK-GVRGFHPESKEPFADVFKTVVNAMEKK 341 (535)
Q Consensus 281 ~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~-~v~~~~~~~G~~~~~~~D~vi~a~G~~ 341 (535)
.++.+.+.+.+++.|+++ .++.|++|..++++++ .|++ .+|+ ++.||.||.+.+..
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~---~~G~--~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKS---SDGE--IAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEE---TTSC--EEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEE---CCCc--EEECCEEEECCCcc
Confidence 467788888899999999 9999999987324554 4666 3677 79999999999988
No 413
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=92.33 E-value=0.13 Score=38.15 Aligned_cols=32 Identities=13% Similarity=0.274 Sum_probs=26.6
Q ss_pred cEEEEeCCCchhhHHHHHHHHHhcCCcceEEEE
Q psy14461 59 RILIFTHAVLREENARAERYLNARGDRFAVLYL 91 (535)
Q Consensus 59 ~v~v~~k~~cp~~~~~~k~~~~~~~~~~~~~~v 91 (535)
++.+|+.++|| +|.+++.++.+.+.++..+++
T Consensus 2 ~i~~y~~~~C~-~C~~~~~~l~~~~i~~~~~di 33 (75)
T 1r7h_A 2 SITLYTKPACV-QCTATKKALDRAGLAYNTVDI 33 (75)
T ss_dssp CEEEEECTTCH-HHHHHHHHHHHTTCCCEEEET
T ss_pred eEEEEeCCCCh-HHHHHHHHHHHcCCCcEEEEC
Confidence 47789999999 999999999999877655443
No 414
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=92.31 E-value=0.076 Score=55.97 Aligned_cols=34 Identities=12% Similarity=-0.220 Sum_probs=31.1
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSH 122 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~ 122 (535)
++|+|||+|.+|+.+|+.+...+.+|+|+|+++.
T Consensus 4 ~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~ 37 (501)
T 2qcu_A 4 KDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDL 37 (501)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSST
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCC
Confidence 5789999999999999999888999999999863
No 415
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=92.25 E-value=0.094 Score=53.16 Aligned_cols=33 Identities=12% Similarity=-0.132 Sum_probs=30.4
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCC
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGS 121 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~ 121 (535)
.+|+|||+|.+|+.+|+.....+.+|+|+|+.+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 368999999999999999999999999999876
No 416
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=92.23 E-value=0.082 Score=57.72 Aligned_cols=35 Identities=11% Similarity=-0.179 Sum_probs=31.6
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHL 123 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~ 123 (535)
.+|+|||+|.+|+.+|+.+...+.+|+|+||....
T Consensus 6 ~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~ 40 (660)
T 2bs2_A 6 CDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVK 40 (660)
T ss_dssp CSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGG
T ss_pred ccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 57899999999999999998888999999998743
No 417
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=92.22 E-value=0.19 Score=42.92 Aligned_cols=33 Identities=12% Similarity=0.201 Sum_probs=30.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 240 WPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 240 ~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
..++++|+|.|.+|..+|..|.+.|.+|+++++
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~ 38 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIET 38 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEEC
Confidence 457899999999999999999999999999986
No 418
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=92.18 E-value=0.078 Score=52.75 Aligned_cols=30 Identities=10% Similarity=0.249 Sum_probs=28.7
Q ss_pred cEEEECCChHHHHHHHHHHhCC------CcEEEEEc
Q psy14461 243 KTLVLGGSLMAVEIAATLNFLG------VPVTLVYS 272 (535)
Q Consensus 243 ~vvViGgG~~g~e~A~~l~~~g------~~Vtlv~~ 272 (535)
+|+|||||.+|+-+|..|++.| .+|+|+++
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~ 37 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYAD 37 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEES
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEEC
Confidence 6999999999999999999998 89999998
No 419
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=92.16 E-value=0.093 Score=54.19 Aligned_cols=57 Identities=12% Similarity=-0.024 Sum_probs=44.3
Q ss_pred HHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEEecCCCCCceEEEcCEEEEccCCCCC
Q psy14461 281 QEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFD 343 (535)
Q Consensus 281 ~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~~~~~~G~~~~~~~D~vi~a~G~~p~ 343 (535)
..+.+.+.+.+++.|+++ +++.|++|... ++++..... +|+ ++.+|.||+++|..+.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~-~~~v~~v~~---~g~--~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIME-NGKVVGVKS---EGE--VARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEE-TTEEEEEEE---TTE--EEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEe-CCEEEEEEE---CCe--EEECCEEEECCCCCcc
Confidence 367777778788889999 99999999876 455543332 676 7999999999998764
No 420
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=92.15 E-value=0.11 Score=54.63 Aligned_cols=35 Identities=20% Similarity=0.332 Sum_probs=32.2
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcC
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRL 275 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~ 275 (535)
..+|+|||+|..|+-+|..|++.|.+|+|+++ +++
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 48 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKA 48 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCC
Confidence 46899999999999999999999999999998 665
No 421
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=92.14 E-value=0.085 Score=57.49 Aligned_cols=35 Identities=11% Similarity=-0.070 Sum_probs=30.9
Q ss_pred EEEEEeeCCccHHHHHHHHHh---h-CCCeEEEEecCCc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQ---T-NQRRDELQERGSH 122 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~---~-~~~~V~lie~~~~ 122 (535)
..+|+|||+|++|+.+|+.+. . .+.+|+|+||...
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 358999999999999999887 5 6899999999874
No 422
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=92.05 E-value=0.25 Score=52.99 Aligned_cols=57 Identities=18% Similarity=0.095 Sum_probs=39.9
Q ss_pred HHHHHhhhcCCeEE-cceEEEEEEEeC---CCcE-EEEEecCCCCCceEEEcC-EEEEccCCCC
Q psy14461 285 RILLSSLTKAGVSI-QCCVIEKVISSF---DGMK-GVRGFHPESKEPFADVFK-TVVNAMEKKF 342 (535)
Q Consensus 285 ~~~~~~l~~~gV~i-~~~~v~~i~~~~---~~~~-~v~~~~~~~G~~~~~~~D-~vi~a~G~~p 342 (535)
.++...+++.++++ +++.|++|.-++ +++. -|++.. .+|+..++.+. -||+|.|.--
T Consensus 231 ayL~p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~-~~G~~~~v~A~kEVILsAGa~~ 293 (583)
T 3qvp_A 231 EWLLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGT-HKGNTHNVYAKHEVLLAAGSAV 293 (583)
T ss_dssp HHTTTTTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEES-STTCEEEEEEEEEEEECSCTTT
T ss_pred HHHHHhhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEe-cCCcEEEEEECCEEEEeCCccC
Confidence 34444556789999 999999997652 2333 366652 26777788887 6999999653
No 423
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=92.02 E-value=0.13 Score=56.35 Aligned_cols=37 Identities=16% Similarity=-0.100 Sum_probs=33.4
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSF 125 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~ 125 (535)
.+|+|||+|++|+++|..+...+.+|+|+|+.+.+++
T Consensus 108 ~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg 144 (662)
T 2z3y_A 108 GKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 144 (662)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBT
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 5789999999999999998888999999999987654
No 424
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=92.00 E-value=0.19 Score=43.48 Aligned_cols=32 Identities=28% Similarity=0.380 Sum_probs=30.0
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
.++++|+|+|.+|..+|..|.+.|.+|+++++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~ 34 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISN 34 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEC
Confidence 46899999999999999999999999999986
No 425
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=91.98 E-value=0.14 Score=39.95 Aligned_cols=38 Identities=8% Similarity=-0.044 Sum_probs=29.6
Q ss_pred cEEEEeCCCchhhHHHHHHHHHhcCCcceEEEEEeeCCccH
Q psy14461 59 RILIFTHAVLREENARAERYLNARGDRFAVLYLDRIGDEGI 99 (535)
Q Consensus 59 ~v~v~~k~~cp~~~~~~k~~~~~~~~~~~~~~v~iiG~G~a 99 (535)
+|++|++++|| +|..++.++.+.+.++ +.+++|-.. +.
T Consensus 2 ~vv~f~a~~C~-~C~~~~~~L~~~~~~~-~~~vdid~~-~~ 39 (87)
T 1ttz_A 2 ALTLYQRDDCH-LCDQAVEALAQARAGA-FFSVFIDDD-AA 39 (87)
T ss_dssp CEEEEECSSCH-HHHHHHHHHHHTTCCC-EEEEECTTC-HH
T ss_pred EEEEEECCCCc-hHHHHHHHHHHHHHhh-eEEEECCCC-HH
Confidence 47899999999 9999999999988763 355665543 44
No 426
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=91.89 E-value=0.13 Score=52.49 Aligned_cols=34 Identities=21% Similarity=0.242 Sum_probs=31.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcC
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRL 275 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~ 275 (535)
.+|+|||||..|+-+|..|++.|.+|+++++ +++
T Consensus 30 ~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 30 FDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHI 64 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECccHHHHHHHHHHHHCCCceEEEeccCCC
Confidence 4799999999999999999999999999998 654
No 427
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=91.80 E-value=0.086 Score=57.54 Aligned_cols=35 Identities=11% Similarity=-0.043 Sum_probs=30.6
Q ss_pred EEEEEeeCCccHHHHHHHHHhhC------CCeEEEEecCCc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTN------QRRDELQERGSH 122 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~------~~~V~lie~~~~ 122 (535)
..+|+|||+|.+|+.+|+.+... +.+|+|+||...
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~ 62 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASL 62 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCC
Confidence 36799999999999999988765 889999999763
No 428
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=91.78 E-value=0.089 Score=54.33 Aligned_cols=34 Identities=18% Similarity=0.160 Sum_probs=31.0
Q ss_pred CcEEEECCChHHHHHHHHHHhCC-CcEEEEEc-CcC
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLG-VPVTLVYS-RRL 275 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g-~~Vtlv~~-~~~ 275 (535)
.+|+|||||.+|+-+|..|+++| .+|+|+++ ..+
T Consensus 24 ~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~ 59 (448)
T 3axb_A 24 FDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAP 59 (448)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSST
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCC
Confidence 47999999999999999999999 99999998 544
No 429
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.72 E-value=0.2 Score=42.56 Aligned_cols=31 Identities=23% Similarity=0.236 Sum_probs=29.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
++++|+|+|.+|..+|..|.+.|.+|+++++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~ 37 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDK 37 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEC
Confidence 6899999999999999999999999999986
No 430
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=91.72 E-value=0.14 Score=57.45 Aligned_cols=38 Identities=18% Similarity=-0.056 Sum_probs=34.1
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCccccc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFR 126 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~ 126 (535)
.+|+|||+|++|+++|..+...+.+|+|+|+.+.+++.
T Consensus 279 ~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~ 316 (852)
T 2xag_A 279 GKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGR 316 (852)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCc
Confidence 58899999999999999998899999999999876543
No 431
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=91.68 E-value=0.14 Score=42.61 Aligned_cols=45 Identities=9% Similarity=0.047 Sum_probs=33.0
Q ss_pred EEEEeCCCchhhH------HHHHHHHHhcCCcceEEEEEeeCCccHHHHHHHHHhh
Q psy14461 60 ILIFTHAVLREEN------ARAERYLNARGDRFAVLYLDRIGDEGILLEEELKRQT 109 (535)
Q Consensus 60 v~v~~k~~cp~~~------~~~k~~~~~~~~~~~~~~v~iiG~G~aG~~~al~~~~ 109 (535)
|.||+.+.|| +| .+++.+|.+.+..++.++ |-.. +. ....++...
T Consensus 2 V~vYtt~~c~-~c~~kk~c~~aK~lL~~kgV~feEid--I~~d-~~-~r~eM~~~~ 52 (121)
T 1u6t_A 2 IRVYIASSSG-STAIKKKQQDVLGFLEANKIGFEEKD--IAAN-EE-NRKWMRENV 52 (121)
T ss_dssp EEEEECTTCS-CHHHHHHHHHHHHHHHHTTCCEEEEE--CTTC-HH-HHHHHHHHS
T ss_pred EEEEecCCCC-CccchHHHHHHHHHHHHCCCceEEEE--CCCC-HH-HHHHHHHhc
Confidence 7889999999 98 799999999998775544 4333 44 555555544
No 432
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=91.59 E-value=0.14 Score=42.58 Aligned_cols=33 Identities=12% Similarity=0.172 Sum_probs=28.4
Q ss_pred cEEEEeCCCchhhHHHHHHHHHhcCCcceEEEEE
Q psy14461 59 RILIFTHAVLREENARAERYLNARGDRFAVLYLD 92 (535)
Q Consensus 59 ~v~v~~k~~cp~~~~~~k~~~~~~~~~~~~~~v~ 92 (535)
.|.+|+++.|| +|.++++++.+.|..++.+++.
T Consensus 6 ~i~iY~~~~C~-~C~ka~~~L~~~gi~y~~~di~ 38 (120)
T 2kok_A 6 SVTIYGIKNCD-TMKKARIWLEDHGIDYTFHDYK 38 (120)
T ss_dssp CEEEEECSSCH-HHHHHHHHHHHHTCCEEEEEHH
T ss_pred EEEEEECCCCh-HHHHHHHHHHHcCCcEEEEeee
Confidence 47899999999 9999999999999887666544
No 433
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=91.53 E-value=0.16 Score=42.36 Aligned_cols=32 Identities=16% Similarity=0.199 Sum_probs=27.3
Q ss_pred EEEEeCCCchhhHHHHHHHHHhcCCcceEEEEE
Q psy14461 60 ILIFTHAVLREENARAERYLNARGDRFAVLYLD 92 (535)
Q Consensus 60 v~v~~k~~cp~~~~~~k~~~~~~~~~~~~~~v~ 92 (535)
|.+|+++.|| +|.++++++.+.|..++++++.
T Consensus 2 i~iY~~~~C~-~c~ka~~~L~~~gi~~~~~di~ 33 (120)
T 3l78_A 2 VTLFLSPSCT-SCRKARAWLNRHDVVFQEHNIM 33 (120)
T ss_dssp EEEEECSSCH-HHHHHHHHHHHTTCCEEEEETT
T ss_pred EEEEeCCCCH-HHHHHHHHHHHcCCCeEEEecc
Confidence 6789999999 9999999999999887655544
No 434
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=91.52 E-value=0.12 Score=55.32 Aligned_cols=61 Identities=15% Similarity=0.062 Sum_probs=44.0
Q ss_pred cHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcE-EEEEecCCCCCceEEEcCEEEEccCCC
Q psy14461 280 DQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMK-GVRGFHPESKEPFADVFKTVVNAMEKK 341 (535)
Q Consensus 280 ~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~-~v~~~~~~~G~~~~~~~D~vi~a~G~~ 341 (535)
+..+...+.+.+.+.|+++ .+++|+++..+ ++.+ .|++.+..+|+..++.+|.||+|+|.-
T Consensus 187 ~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~-~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~w 249 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAYLVSKMKAVGFLYE-GDQIVGVKARDLLTDEVIEIKAKLVINTSGPW 249 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEBSCEEECCGGG
T ss_pred hHHHHHHHHHHHHHcCCeEEeccEEEEEEEe-CCEEEEEEEEEcCCCCEEEEEcCEEEECCChh
Confidence 3455566667778889999 99999999876 4443 466543224554479999999999953
No 435
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=91.50 E-value=0.13 Score=53.78 Aligned_cols=34 Identities=21% Similarity=0.385 Sum_probs=31.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcC
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRL 275 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~ 275 (535)
.+|+|||+|..|+-+|..|++.|.+|+|+++ +++
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 74 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRI 74 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBS
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 5799999999999999999999999999998 655
No 436
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=91.44 E-value=0.12 Score=52.58 Aligned_cols=34 Identities=15% Similarity=0.209 Sum_probs=31.2
Q ss_pred CcEEEECCChHHHHHHHHHHhC-CCcEEEEEc-CcC
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFL-GVPVTLVYS-RRL 275 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~-~~~ 275 (535)
.+|+|||+|..|+-+|..|++. |.+|+|+++ +++
T Consensus 8 ~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 8 FDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 5799999999999999999998 999999998 654
No 437
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=91.43 E-value=0.14 Score=47.76 Aligned_cols=34 Identities=24% Similarity=0.242 Sum_probs=31.1
Q ss_pred CCCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 239 AWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 239 ~~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
-.+++|+|||||.+|...+..|.+.|++|+++.+
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap 62 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAP 62 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECC
Confidence 3468999999999999999999999999999974
No 438
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=91.03 E-value=0.17 Score=47.49 Aligned_cols=53 Identities=21% Similarity=0.266 Sum_probs=37.9
Q ss_pred hcCCcEEEEeCCCchhhHHHHHHHHHhcCCcceEEEEEeeCCccHHHHHHHHHhhCCCe
Q psy14461 55 SYENRILIFTHAVLREENARAERYLNARGDRFAVLYLDRIGDEGILLEEELKRQTNQRR 113 (535)
Q Consensus 55 i~~~~v~v~~k~~cp~~~~~~k~~~~~~~~~~~~~~v~iiG~G~aG~~~al~~~~~~~~ 113 (535)
+...++.+|++++|| +|.+++.++.+.+.+++.++|. .. +. ...+....+..+
T Consensus 167 i~~~~i~ly~~~~Cp-~C~~a~~~L~~~~i~~~~~~i~--~~-~~--~~~l~~~~g~~~ 219 (241)
T 1nm3_A 167 QVQESISIFTKPGCP-FCAKAKQLLHDKGLSFEEIILG--HD-AT--IVSVRAVSGRTT 219 (241)
T ss_dssp CCCCCEEEEECSSCH-HHHHHHHHHHHHTCCCEEEETT--TT-CC--HHHHHHHTCCSS
T ss_pred cccceEEEEECCCCh-HHHHHHHHHHHcCCceEEEECC--Cc-hH--HHHHHHHhCCCC
Confidence 456789999999999 9999999999999887655543 22 33 245555454433
No 439
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=90.97 E-value=0.17 Score=52.73 Aligned_cols=38 Identities=11% Similarity=-0.052 Sum_probs=32.6
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCC-eEEEEecCCccccc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQR-RDELQERGSHLSFR 126 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~-~V~lie~~~~~~~~ 126 (535)
.+|+|||+|.+|+.+|..+...+. +|+|+|+.+.+++.
T Consensus 5 ~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~ 43 (472)
T 1b37_A 5 PRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGR 43 (472)
T ss_dssp CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCc
Confidence 467999999999999998888887 89999999876543
No 440
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=90.94 E-value=0.13 Score=53.46 Aligned_cols=34 Identities=21% Similarity=0.320 Sum_probs=31.2
Q ss_pred CcEEEECCChHHHHHHHHHHhCC--CcEEEEEc-CcC
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLG--VPVTLVYS-RRL 275 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g--~~Vtlv~~-~~~ 275 (535)
.+|+|||||.+|+-+|..|++.| .+|+++++ +.+
T Consensus 5 ~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~ 41 (475)
T 3lov_A 5 KRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERL 41 (475)
T ss_dssp CEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCC
Confidence 57999999999999999999999 99999998 653
No 441
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=90.90 E-value=0.15 Score=51.39 Aligned_cols=33 Identities=18% Similarity=0.311 Sum_probs=30.4
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcC
Q psy14461 243 KTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRL 275 (535)
Q Consensus 243 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~ 275 (535)
+++|||+|..|+-+|..|++.|.+|+++++ +++
T Consensus 3 ~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHI 36 (367)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence 689999999999999999999999999998 654
No 442
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=90.89 E-value=0.09 Score=40.01 Aligned_cols=34 Identities=21% Similarity=0.138 Sum_probs=23.5
Q ss_pred CcEEEEeCCCchhhHHHHHHHHH----hcCCcceEEEEE
Q psy14461 58 NRILIFTHAVLREENARAERYLN----ARGDRFAVLYLD 92 (535)
Q Consensus 58 ~~v~v~~k~~cp~~~~~~k~~~~----~~~~~~~~~~v~ 92 (535)
.++.+|.+++|| +|.+++..+. +.+.++.+++++
T Consensus 2 ~~~~~f~~~~C~-~C~~~~~~l~~~~~~~~~~~~~~~v~ 39 (80)
T 2k8s_A 2 ASKAIFYHAGCP-VCVSAEQAVANAIDPSKYTVEIVHLG 39 (80)
T ss_dssp CEEEEEEECSCH-HHHHHHHHHHHHSCTTTEEEEEEETT
T ss_pred cceEEEeCCCCC-chHHHHHHHHHHHHhcCCeEEEEEec
Confidence 358889999999 9999999444 444444444443
No 443
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=90.86 E-value=0.26 Score=41.45 Aligned_cols=31 Identities=16% Similarity=0.157 Sum_probs=29.1
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
.+++|+|+|.+|..+|..|.+.|.+|+++++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEC
Confidence 4799999999999999999999999999986
No 444
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=90.82 E-value=0.23 Score=39.78 Aligned_cols=37 Identities=24% Similarity=0.218 Sum_probs=28.3
Q ss_pred CCcEEEEeCCCchhhHHHHHHHHHhcCCcceEEEEEee
Q psy14461 57 ENRILIFTHAVLREENARAERYLNARGDRFAVLYLDRI 94 (535)
Q Consensus 57 ~~~v~v~~k~~cp~~~~~~k~~~~~~~~~~~~~~v~ii 94 (535)
...|++|++.+|| +|.+++.++.+....+.+..++|-
T Consensus 16 ~~~v~~f~~~~C~-~C~~~~~~L~~l~~~i~~~~vdi~ 52 (100)
T 1wjk_A 16 LPVLTLFTKAPCP-LCDEAKEVLQPYKDRFILQEVDIT 52 (100)
T ss_dssp CCEEEEEECSSCH-HHHHHHHHTSTTSSSSEEEEEETT
T ss_pred CCEEEEEeCCCCc-chHHHHHHHHHhhhCCeEEEEECC
Confidence 3457789999999 999999999865444556666664
No 445
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=90.68 E-value=0.16 Score=38.84 Aligned_cols=22 Identities=18% Similarity=0.176 Sum_probs=19.8
Q ss_pred cEEEEeCCCchhhHHHHHHHHHh
Q psy14461 59 RILIFTHAVLREENARAERYLNA 81 (535)
Q Consensus 59 ~v~v~~k~~cp~~~~~~k~~~~~ 81 (535)
+|++|++++|| +|.+++.++.+
T Consensus 2 ~v~~f~~~~C~-~C~~~~~~l~~ 23 (85)
T 1ego_A 2 QTVIFGRSGCP-YCVRAKDLAEK 23 (85)
T ss_dssp EEEEECCTTST-HHHHHHHHHHH
T ss_pred EEEEEeCCCCC-CHHHHHHHHHH
Confidence 47889999999 99999999986
No 446
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=90.66 E-value=0.18 Score=56.06 Aligned_cols=37 Identities=11% Similarity=-0.074 Sum_probs=33.3
Q ss_pred EEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccc
Q psy14461 89 LYLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSF 125 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~ 125 (535)
.+|+|||+|.+|+++|..+...+.+|+|+|+.+.+++
T Consensus 337 ~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 337 KSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 6899999999999999988888999999999887654
No 447
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=90.62 E-value=0.21 Score=56.12 Aligned_cols=35 Identities=29% Similarity=0.497 Sum_probs=31.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-Cc
Q psy14461 240 WPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RR 274 (535)
Q Consensus 240 ~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~ 274 (535)
..++|+|||+|..|+.+|..|++.|.+|+|+++ +.
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~ 312 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDR 312 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCc
Confidence 357899999999999999999999999999987 54
No 448
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=90.59 E-value=0.2 Score=54.77 Aligned_cols=35 Identities=29% Similarity=0.497 Sum_probs=31.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-Cc
Q psy14461 240 WPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RR 274 (535)
Q Consensus 240 ~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~ 274 (535)
..++|+|||+|..|+.+|..|.+.|.+|+++++ +.
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~ 141 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDR 141 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 357899999999999999999999999999987 54
No 449
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=90.59 E-value=0.26 Score=41.59 Aligned_cols=32 Identities=22% Similarity=0.147 Sum_probs=29.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
.++++|+|+|.+|..+|..|.+.|.+|+++++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~ 37 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDI 37 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEES
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 36799999999999999999999999999986
No 450
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=90.50 E-value=0.26 Score=51.66 Aligned_cols=35 Identities=20% Similarity=0.189 Sum_probs=31.7
Q ss_pred CCcEEEECCChHHHHHHHHHHhCC-CcEEEEEc-CcC
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLG-VPVTLVYS-RRL 275 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g-~~Vtlv~~-~~~ 275 (535)
..+|+|||||..|+-+|..|++.| .+|+++++ +.+
T Consensus 9 ~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 9 TPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTP 45 (484)
T ss_dssp SCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 468999999999999999999998 79999998 654
No 451
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=90.41 E-value=0.21 Score=40.52 Aligned_cols=32 Identities=25% Similarity=0.173 Sum_probs=29.4
Q ss_pred CCcEEEECCChHHHHHHHHHHhCC-CcEEEEEc
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLG-VPVTLVYS 272 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g-~~Vtlv~~ 272 (535)
.++++|+|+|.+|..++..|.+.| .+|+++.+
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r 37 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADH 37 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEES
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeC
Confidence 368999999999999999999999 89999887
No 452
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=90.40 E-value=0.2 Score=52.84 Aligned_cols=35 Identities=14% Similarity=-0.016 Sum_probs=30.6
Q ss_pred EEEEEeeCCccHHHHHHHHHhh-CCCeEEEEecCCc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQT-NQRRDELQERGSH 122 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~-~~~~V~lie~~~~ 122 (535)
.+|++|||+|.+|...|.++.. .+.+|+|+|++..
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 3789999999999999988865 6789999999974
No 453
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=90.35 E-value=0.22 Score=40.54 Aligned_cols=36 Identities=6% Similarity=0.028 Sum_probs=27.0
Q ss_pred CcEEEEeCCCchhhHHHHHHHHHh----cCCcceEEEEEeeCC
Q psy14461 58 NRILIFTHAVLREENARAERYLNA----RGDRFAVLYLDRIGD 96 (535)
Q Consensus 58 ~~v~v~~k~~cp~~~~~~k~~~~~----~~~~~~~~~v~iiG~ 96 (535)
..|++|++.+|| +|.+++.++.+ .+.++ .+++|-..
T Consensus 30 ~~vv~y~~~~C~-~C~~a~~~L~~l~~e~~i~~--~~vDId~d 69 (107)
T 2fgx_A 30 RKLVVYGREGCH-LCEEMIASLRVLQKKSWFEL--EVINIDGN 69 (107)
T ss_dssp CCEEEEECSSCH-HHHHHHHHHHHHHHHSCCCC--EEEETTTC
T ss_pred cEEEEEeCCCCh-hHHHHHHHHHHHHHhcCCeE--EEEECCCC
Confidence 358899999999 99999999987 56444 45555433
No 454
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=90.16 E-value=0.23 Score=52.90 Aligned_cols=36 Identities=14% Similarity=-0.026 Sum_probs=32.1
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHL 123 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~ 123 (535)
.++++|||+|++|+.+|.++...+.+|+|+|++...
T Consensus 7 ~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 7 PYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred ceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 378999999999999999888889999999998743
No 455
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=90.13 E-value=0.18 Score=48.57 Aligned_cols=33 Identities=24% Similarity=0.276 Sum_probs=31.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 240 WPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 240 ~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
.+++|+|||||.+|...+..|.+.|++|+++.+
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap 44 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSP 44 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcC
Confidence 468999999999999999999999999999986
No 456
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=89.85 E-value=0.24 Score=52.57 Aligned_cols=35 Identities=14% Similarity=-0.024 Sum_probs=31.6
Q ss_pred eEEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCc
Q psy14461 87 AVLYLDRIGDEGILLEEELKRQTNQRRDELQERGSH 122 (535)
Q Consensus 87 ~~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~ 122 (535)
..+|++|||+|.+|+..|.++.. +.+|+|+|++..
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~ 59 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBC
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCC
Confidence 35799999999999999999888 899999999974
No 457
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=89.58 E-value=0.22 Score=49.07 Aligned_cols=32 Identities=25% Similarity=0.301 Sum_probs=29.8
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
.++|.|||+|.+|.-+|..++..|.+|++++.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~ 37 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDI 37 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEEC
Confidence 46899999999999999999999999999987
No 458
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=89.38 E-value=0.69 Score=47.88 Aligned_cols=125 Identities=12% Similarity=-0.067 Sum_probs=76.8
Q ss_pred EEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHHHH
Q psy14461 90 YLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRFCI 169 (535)
Q Consensus 90 ~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 169 (535)
++.++|.|++|+++|..+...+.+|+++|..... . + .
T Consensus 11 ~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~------~-------~------------------~------------ 47 (451)
T 3lk7_A 11 KVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFD------E-------N------------------P------------ 47 (451)
T ss_dssp EEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGG------G-------C------------------H------------
T ss_pred EEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCccc------C-------C------------------h------------
Confidence 5699999999999998888899999999986521 0 0 0
Q ss_pred HHHHHHHHHHHhcCcEEEEeEEEEecCCEEEEceeEEE-cceEEEeeCceecC-CCC-----CCceechhhHHhccCCCC
Q psy14461 170 RAKNDSMRELKALGIDIVRTAAAFTNPHTIKLSNRSVT-GFNFLLAVERRCLP-EPR-----NSALISADDLFRLGAWPG 242 (535)
Q Consensus 170 ~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~~~~~~-~d~lViATGs~p~~-~i~-----G~~v~~~~~~~~~~~~~k 242 (535)
..+.+++.||++..|.. .. ...-. +|.||+++|..+.. .+. |-.+++-.+++......+
T Consensus 48 -----~~~~L~~~gi~~~~g~~----~~-----~~~~~~~d~vv~spgi~~~~p~~~~a~~~gi~v~~~~e~~~~~~~~~ 113 (451)
T 3lk7_A 48 -----TAQSLLEEGIKVVCGSH----PL-----ELLDEDFCYMIKNPGIPYNNPMVKKALEKQIPVLTEVELAYLVSESQ 113 (451)
T ss_dssp -----HHHHHHHTTCEEEESCC----CG-----GGGGSCEEEEEECTTSCTTSHHHHHHHHTTCCEECHHHHHHHHCCSE
T ss_pred -----HHHHHHhCCCEEEECCC----hH-----HhhcCCCCEEEECCcCCCCChhHHHHHHCCCcEEeHHHHHHHhcCCC
Confidence 01345667999877641 10 00012 89999999986644 221 134566656554222223
Q ss_pred cEEEECC-Ch--HHHHHHHHHHhCCCcEEEEE
Q psy14461 243 KTLVLGG-SL--MAVEIAATLNFLGVPVTLVY 271 (535)
Q Consensus 243 ~vvViGg-G~--~g~e~A~~l~~~g~~Vtlv~ 271 (535)
-|.|-|. |- +..-++..|...|.++.+..
T Consensus 114 ~IaVTGTnGKTTTt~ml~~iL~~~g~~~~~~G 145 (451)
T 3lk7_A 114 LIGITGSNGKTTTTTMIAEVLNAGGQRGLLAG 145 (451)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHHhcCCCEEEee
Confidence 4445553 22 34456777888887775443
No 459
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=89.09 E-value=0.3 Score=40.70 Aligned_cols=32 Identities=9% Similarity=0.144 Sum_probs=27.4
Q ss_pred EEEEeCCCchhhHHHHHHHHHhcCCcceEEEEE
Q psy14461 60 ILIFTHAVLREENARAERYLNARGDRFAVLYLD 92 (535)
Q Consensus 60 v~v~~k~~cp~~~~~~k~~~~~~~~~~~~~~v~ 92 (535)
|.+|..+.|| +|.++++++.+.|..++.+++.
T Consensus 6 i~iY~~p~C~-~c~ka~~~L~~~gi~~~~~di~ 37 (120)
T 3gkx_A 6 TLFLQYPACS-TCQKAKKWLIENNIEYTNRLIV 37 (120)
T ss_dssp CEEEECTTCH-HHHHHHHHHHHTTCCCEEEETT
T ss_pred EEEEECCCCh-HHHHHHHHHHHcCCceEEEecc
Confidence 6789999999 9999999999999887655543
No 460
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=88.84 E-value=0.34 Score=49.92 Aligned_cols=35 Identities=17% Similarity=0.134 Sum_probs=31.8
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCC
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLL 276 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l 276 (535)
.+|+|||+|..|+-+|..|++.|.+|+++++ +.+.
T Consensus 7 ~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~g 42 (433)
T 1d5t_A 7 YDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYG 42 (433)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCcc
Confidence 5799999999999999999999999999998 6543
No 461
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=88.83 E-value=0.95 Score=44.58 Aligned_cols=122 Identities=14% Similarity=0.028 Sum_probs=73.4
Q ss_pred EEEEeeCCccHHHH-HHHHHhhCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHH
Q psy14461 89 LYLDRIGDEGILLE-EELKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRF 167 (535)
Q Consensus 89 ~~v~iiG~G~aG~~-~al~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (535)
.++.+||-|++|++ .|..+...+.+|++.|+.... . .
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~--------~------------------------~---------- 42 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYP--------P------------------------M---------- 42 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCT--------T------------------------H----------
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCc--------H------------------------H----------
Confidence 46799999999996 666777889999999986521 0 0
Q ss_pred HHHHHHHHHHHHHhcCcEEEEeEEEEecCCEEEEceeE-EEcceEEEeeCceecC-CCC-----CCceechhhHHhc--c
Q psy14461 168 CIRAKNDSMRELKALGIDIVRTAAAFTNPHTIKLSNRS-VTGFNFLLAVERRCLP-EPR-----NSALISADDLFRL--G 238 (535)
Q Consensus 168 ~~~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~~~~-~~~d~lViATGs~p~~-~i~-----G~~v~~~~~~~~~--~ 238 (535)
.+.+++.||++..|. +.. ... ..+|.||+.+|..|.. .+. |-.+++-.+++.. .
T Consensus 43 --------~~~L~~~gi~v~~g~----~~~-----~l~~~~~d~vV~Spgi~~~~p~~~~a~~~gi~v~~~~e~~~~~~~ 105 (326)
T 3eag_A 43 --------STQLEALGIDVYEGF----DAA-----QLDEFKADVYVIGNVAKRGMDVVEAILNLGLPYISGPQWLSENVL 105 (326)
T ss_dssp --------HHHHHHTTCEEEESC----CGG-----GGGSCCCSEEEECTTCCTTCHHHHHHHHTTCCEEEHHHHHHHHTG
T ss_pred --------HHHHHhCCCEEECCC----CHH-----HcCCCCCCEEEECCCcCCCCHHHHHHHHcCCcEEeHHHHHHHHHh
Confidence 133566799877653 111 011 2489999999976543 221 2235555554431 1
Q ss_pred CCCCcEEEECC-Ch--HHHHHHHHHHhCCCcEEE
Q psy14461 239 AWPGKTLVLGG-SL--MAVEIAATLNFLGVPVTL 269 (535)
Q Consensus 239 ~~~k~vvViGg-G~--~g~e~A~~l~~~g~~Vtl 269 (535)
...+-|.|-|. |- +..-++..|...|.++.+
T Consensus 106 ~~~~~IaVTGTnGKTTTt~ll~~iL~~~g~~~~~ 139 (326)
T 3eag_A 106 HHHWVLGVAGTHGKTTTASMLAWVLEYAGLAPGF 139 (326)
T ss_dssp GGSEEEEEESSSCHHHHHHHHHHHHHHTTCCCEE
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHHHcCCCceE
Confidence 21233445453 22 344566777888877654
No 462
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=88.73 E-value=0.34 Score=50.50 Aligned_cols=34 Identities=15% Similarity=0.234 Sum_probs=31.6
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCC
Q psy14461 243 KTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLL 276 (535)
Q Consensus 243 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l 276 (535)
+|+|||+|..|+-+|..|++.|.+|.++++ +.+.
T Consensus 22 dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~G 56 (475)
T 3p1w_A 22 DVIILGTGLKECILSGLLSHYGKKILVLDRNPYYG 56 (475)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCC
Confidence 799999999999999999999999999999 6654
No 463
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=88.48 E-value=0.37 Score=40.07 Aligned_cols=33 Identities=9% Similarity=0.102 Sum_probs=27.4
Q ss_pred cEEEEeCCCchhhHHHHHHHHHhcCCcceEEEEE
Q psy14461 59 RILIFTHAVLREENARAERYLNARGDRFAVLYLD 92 (535)
Q Consensus 59 ~v~v~~k~~cp~~~~~~k~~~~~~~~~~~~~~v~ 92 (535)
.+.+|..+.|| +|.++++++.+.|..++.+++.
T Consensus 4 Mi~iY~~~~C~-~c~ka~~~L~~~gi~~~~~di~ 36 (120)
T 3fz4_A 4 MLTFYEYPKCS-TCRRAKAELDDLAWDYDAIDIK 36 (120)
T ss_dssp SEEEEECSSCH-HHHHHHHHHHHHTCCEEEEETT
T ss_pred eEEEEeCCCCh-HHHHHHHHHHHcCCceEEEEec
Confidence 36789999999 9999999999999887555443
No 464
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=88.28 E-value=0.27 Score=41.01 Aligned_cols=33 Identities=9% Similarity=0.113 Sum_probs=27.6
Q ss_pred cEEEEeCCCchhhHHHHHHHHHhcCCcceEEEEE
Q psy14461 59 RILIFTHAVLREENARAERYLNARGDRFAVLYLD 92 (535)
Q Consensus 59 ~v~v~~k~~cp~~~~~~k~~~~~~~~~~~~~~v~ 92 (535)
.|.+|..+.|| +|.++++++.+.|..++.+++.
T Consensus 6 ~i~iY~~p~C~-~c~ka~~~L~~~gi~~~~~di~ 38 (121)
T 3rdw_A 6 DVTIYHNPRCS-KSRETLALVEQQGITPQVVLYL 38 (121)
T ss_dssp CCEEECCTTCH-HHHHHHHHHHTTTCCCEEECTT
T ss_pred cEEEEECCCCH-HHHHHHHHHHHcCCCcEEEeec
Confidence 37789999999 9999999999999887654443
No 465
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.17 E-value=0.44 Score=42.43 Aligned_cols=32 Identities=16% Similarity=0.066 Sum_probs=29.9
Q ss_pred CCcEEEECCChHHHHHHHHHHhC-CCcEEEEEc
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFL-GVPVTLVYS 272 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~ 272 (535)
.++++|+|.|.+|..+|..|.+. |.+|+++++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~ 71 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEI 71 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEES
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEEC
Confidence 46899999999999999999999 999999986
No 466
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=88.10 E-value=0.28 Score=42.09 Aligned_cols=33 Identities=9% Similarity=0.175 Sum_probs=28.0
Q ss_pred cEEEEeCCCchhhHHHHHHHHHhcCCcceEEEEE
Q psy14461 59 RILIFTHAVLREENARAERYLNARGDRFAVLYLD 92 (535)
Q Consensus 59 ~v~v~~k~~cp~~~~~~k~~~~~~~~~~~~~~v~ 92 (535)
.|.+|+.+.|| +|.++++++.+.|..++++++.
T Consensus 3 ~itiY~~p~C~-~crkak~~L~~~gi~~~~idi~ 35 (141)
T 1s3c_A 3 NITIYHNPASG-TSRNTLEMIRNSGTEPTIILYL 35 (141)
T ss_dssp CCEEECCTTCH-HHHHHHHHHHHTTCCCEEECTT
T ss_pred cEEEEECCCCh-HHHHHHHHHHHcCCCEEEEECC
Confidence 47789999999 9999999999999887655544
No 467
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=87.99 E-value=0.37 Score=52.21 Aligned_cols=33 Identities=15% Similarity=0.131 Sum_probs=30.5
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc-Cc
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RR 274 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~ 274 (535)
-.|+|||+|..|+.+|..|++.|.+|+++++ +.
T Consensus 47 ~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~ 80 (623)
T 3pl8_A 47 YDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEI 80 (623)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCC
Confidence 3699999999999999999999999999998 53
No 468
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=87.48 E-value=0.52 Score=49.55 Aligned_cols=36 Identities=14% Similarity=-0.045 Sum_probs=32.4
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHL 123 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~ 123 (535)
.++++|||+|.+|+.+|.++...+.+|+|+|++...
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 40 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLW 40 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 478999999999999999888889999999998854
No 469
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=87.40 E-value=0.81 Score=47.33 Aligned_cols=80 Identities=19% Similarity=0.052 Sum_probs=56.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEE
Q psy14461 240 WPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVR 317 (535)
Q Consensus 240 ~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~ 317 (535)
.+++|.|||.|.+|+-+|..|.++|.+|++.+. +... ++ ..+.|++.||++ .+.... .
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~---~~-----~~~~L~~~gi~~~~g~~~~-------~----- 67 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDE---NP-----TAQSLLEEGIKVVCGSHPL-------E----- 67 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGG---CH-----HHHHHHHTTCEEEESCCCG-------G-----
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccC---Ch-----HHHHHHhCCCEEEECCChH-------H-----
Confidence 368999999999999999999999999999997 4211 11 224566778887 543210 0
Q ss_pred EecCCCCCceEEEcCEEEEccCCCCCCCCC
Q psy14461 318 GFHPESKEPFADVFKTVVNAMEKKFDFAAL 347 (535)
Q Consensus 318 ~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l 347 (535)
+ .++ .+|.|++++|..|+.+.+
T Consensus 68 ~---~~~-----~~d~vv~spgi~~~~p~~ 89 (451)
T 3lk7_A 68 L---LDE-----DFCYMIKNPGIPYNNPMV 89 (451)
T ss_dssp G---GGS-----CEEEEEECTTSCTTSHHH
T ss_pred h---hcC-----CCCEEEECCcCCCCChhH
Confidence 0 011 168999999998877654
No 470
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=87.33 E-value=0.33 Score=46.82 Aligned_cols=31 Identities=29% Similarity=0.336 Sum_probs=29.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
++|.|||+|.+|..+|..|++.|.+|+++++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~ 35 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDI 35 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeC
Confidence 6899999999999999999999999999987
No 471
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=87.28 E-value=0.4 Score=51.26 Aligned_cols=35 Identities=9% Similarity=-0.119 Sum_probs=30.9
Q ss_pred EEEEeeCCccHHHHHHHHHhh-CCCeEEEEecCCcc
Q psy14461 89 LYLDRIGDEGILLEEELKRQT-NQRRDELQERGSHL 123 (535)
Q Consensus 89 ~~v~iiG~G~aG~~~al~~~~-~~~~V~lie~~~~~ 123 (535)
+|++|||+|.+|+..|.++.. .+.+|+|+|++...
T Consensus 3 yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 3 FDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp EEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred cCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 688999999999999998876 78999999998743
No 472
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=87.16 E-value=0.37 Score=49.75 Aligned_cols=123 Identities=10% Similarity=-0.094 Sum_probs=73.7
Q ss_pred EEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcccccccccccccccccchhhcccccccccccccCHHHHHHHHHHHHH
Q psy14461 90 YLDRIGDEGILLEEELKRQTNQRRDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIKRFCI 169 (535)
Q Consensus 90 ~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 169 (535)
++.++|.|++|+++|..+...+.+|+++|........
T Consensus 7 ~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~------------------------------------------- 43 (439)
T 2x5o_A 7 NVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGL------------------------------------------- 43 (439)
T ss_dssp CEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTG-------------------------------------------
T ss_pred EEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchh-------------------------------------------
Confidence 4689999999999998888889999999987632100
Q ss_pred HHHHHHHHHHHhcCcEEEEeEEEEecCCEEEEceeEEEcceEEEeeCceecC-CCCC-----CceechhhHHhccCCCCc
Q psy14461 170 RAKNDSMRELKALGIDIVRTAAAFTNPHTIKLSNRSVTGFNFLLAVERRCLP-EPRN-----SALISADDLFRLGAWPGK 243 (535)
Q Consensus 170 ~~~~~~~~~~~~~gV~~~~g~~~~~~~~~v~~~~~~~~~d~lViATGs~p~~-~i~G-----~~v~~~~~~~~~~~~~k~ 243 (535)
..++ .|+++..|.- . .+... .+|.||+++|..|.. .+.. ..+++..+++......+.
T Consensus 44 -------~~l~-~G~~~~~g~~---~-----~~~~~-~~d~vV~s~gi~~~~p~~~~a~~~~~~v~~~~~~~~~~~~~~v 106 (439)
T 2x5o_A 44 -------DKLP-EAVERHTGSL---N-----DEWLM-AADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCREAQAPI 106 (439)
T ss_dssp -------GGSC-TTSCEEESSC---C-----HHHHH-TCSEEEECTTSCTTCHHHHHHHHTTCEEECHHHHHHHHCCSCE
T ss_pred -------HHhh-CCCEEEECCC---c-----HHHhc-cCCEEEeCCCCCCCCHHHHHHHHCCCcEEEHHHHHHHhcCCCE
Confidence 1133 4666554420 0 00011 478999999976543 2221 234554444332222345
Q ss_pred EEEECCC---hHHHHHHHHHHhCCCcEEEEEc
Q psy14461 244 TLVLGGS---LMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 244 vvViGgG---~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
|.|-|.. -+..-++..|...|.++.+...
T Consensus 107 I~VTGTnGKTTT~~ml~~iL~~~g~~~~~~gn 138 (439)
T 2x5o_A 107 VAITGSNGKSTVTTLVGEMAKAAGVNVGVGGN 138 (439)
T ss_dssp EEEECSSSHHHHHHHHHHHHHHTTCCEEEEES
T ss_pred EEEECCCCHHHHHHHHHHHHHhcCCCEEEecc
Confidence 5565542 3555677788888888765543
No 473
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=87.06 E-value=0.49 Score=49.14 Aligned_cols=34 Identities=15% Similarity=0.333 Sum_probs=30.2
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCC-cEEEEEc-Cc
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGV-PVTLVYS-RR 274 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~-~Vtlv~~-~~ 274 (535)
..+|+|||+|..|+-+|..|++.|. +|+++++ ++
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~ 39 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDH 39 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCC
Confidence 3579999999999999999999998 8999987 53
No 474
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=87.00 E-value=0.35 Score=53.02 Aligned_cols=36 Identities=6% Similarity=-0.055 Sum_probs=31.1
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCC--------CeEEEEecCC-cc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQ--------RRDELQERGS-HL 123 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~--------~~V~lie~~~-~~ 123 (535)
..+|+|||+|.+|+.+|..+...+ .+|+|+|+.+ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 367899999999999998776655 8999999998 76
No 475
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=86.28 E-value=0.42 Score=39.69 Aligned_cols=35 Identities=11% Similarity=0.150 Sum_probs=29.1
Q ss_pred EEEEeCCCchhhHHHHHHHHHhcCCcceEEEEEeeC
Q psy14461 60 ILIFTHAVLREENARAERYLNARGDRFAVLYLDRIG 95 (535)
Q Consensus 60 v~v~~k~~cp~~~~~~k~~~~~~~~~~~~~~v~iiG 95 (535)
+.+|..+.|| +|.++++++.+.|..++.+++.--+
T Consensus 6 i~iY~~p~C~-~c~ka~~~L~~~gi~~~~~di~~~~ 40 (119)
T 3f0i_A 6 VVIYHNPKCS-KSRETLALLENQGIAPQVIKYLETS 40 (119)
T ss_dssp CEEECCTTCH-HHHHHHHHHHHTTCCCEEECHHHHC
T ss_pred EEEEECCCCh-HHHHHHHHHHHcCCceEEEEeccCc
Confidence 6789999999 9999999999999887666554443
No 476
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=85.86 E-value=0.62 Score=48.99 Aligned_cols=36 Identities=14% Similarity=-0.052 Sum_probs=32.2
Q ss_pred EEEEEeeCCccHHHHHHHHHhhCCCeEEEEecCCcc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQTNQRRDELQERGSHL 123 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~~~~~V~lie~~~~~ 123 (535)
.++++|||+|.+|+.+|.++...+.+|+|+|++...
T Consensus 11 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 11 RVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSW 46 (507)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 478999999999999999888889999999998753
No 477
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=85.01 E-value=0.74 Score=42.31 Aligned_cols=30 Identities=20% Similarity=0.303 Sum_probs=28.6
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 243 KTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 243 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
+|+|+|+|.+|..+|..|.+.|.+|+++++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~ 31 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINK 31 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEEC
Confidence 699999999999999999999999999986
No 478
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=84.90 E-value=0.76 Score=47.37 Aligned_cols=75 Identities=11% Similarity=0.040 Sum_probs=52.6
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEEEE
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGVRG 318 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v~~ 318 (535)
+++|+|||.|.+|+.+|..|.++|.+|+..+. ... +. . ..|+ .|+++ .+... .+ .+
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~-~~-~--------~~l~-~G~~~~~g~~~----~~-------~~ 62 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP-PG-L--------DKLP-EAVERHTGSLN----DE-------WL 62 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC-TT-G--------GGSC-TTSCEEESSCC----HH-------HH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc-ch-h--------HHhh-CCCEEEECCCc----HH-------Hh
Confidence 57899999999999999999999999999987 432 11 0 3455 67776 44310 00 00
Q ss_pred ecCCCCCceEEEcCEEEEccCCCCCCCCC
Q psy14461 319 FHPESKEPFADVFKTVVNAMEKKFDFAAL 347 (535)
Q Consensus 319 ~~~~~G~~~~~~~D~vi~a~G~~p~~~~l 347 (535)
. .+|.|++++|..|..+.+
T Consensus 63 ---------~-~~d~vV~s~gi~~~~p~~ 81 (439)
T 2x5o_A 63 ---------M-AADLIVASPGIALAHPSL 81 (439)
T ss_dssp ---------H-TCSEEEECTTSCTTCHHH
T ss_pred ---------c-cCCEEEeCCCCCCCCHHH
Confidence 1 468999999988765443
No 479
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=84.52 E-value=0.88 Score=41.64 Aligned_cols=33 Identities=21% Similarity=0.172 Sum_probs=29.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 240 WPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 240 ~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
...+|.|||.|.+|.-+|..|.+.|.+|+++.+
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcC
Confidence 356899999999999999999999999999987
No 480
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=84.40 E-value=0.85 Score=48.95 Aligned_cols=36 Identities=14% Similarity=-0.103 Sum_probs=32.1
Q ss_pred EEEEEeeCCccHHHHHHHHHhh-CCCeEEEEecCCcc
Q psy14461 88 VLYLDRIGDEGILLEEELKRQT-NQRRDELQERGSHL 123 (535)
Q Consensus 88 ~~~v~iiG~G~aG~~~al~~~~-~~~~V~lie~~~~~ 123 (535)
.++++|||+|.+|+..|.++.. .+.+|+|+|++...
T Consensus 24 ~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 24 TYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 5789999999999999998877 78999999998753
No 481
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=83.97 E-value=0.44 Score=40.67 Aligned_cols=33 Identities=27% Similarity=0.349 Sum_probs=30.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 240 WPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 240 ~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
.+++|+|||+|.+|..++..|.+.|.+|+++.+
T Consensus 20 ~~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r 52 (144)
T 3oj0_A 20 GGNKILLVGNGMLASEIAPYFSYPQYKVTVAGR 52 (144)
T ss_dssp CCCEEEEECCSHHHHHHGGGCCTTTCEEEEEES
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcC
Confidence 378999999999999999999999988888876
No 482
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=83.46 E-value=0.41 Score=52.40 Aligned_cols=35 Identities=14% Similarity=0.208 Sum_probs=32.0
Q ss_pred CCcEEEECCChHHHHHHHHHHhCC--------CcEEEEEc-C-cC
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLG--------VPVTLVYS-R-RL 275 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g--------~~Vtlv~~-~-~~ 275 (535)
+++|+|||+|..|+-+|..|.+.| .+|+|+++ + ++
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 368999999999999999999988 89999999 7 66
No 483
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=83.33 E-value=1.1 Score=44.62 Aligned_cols=31 Identities=29% Similarity=0.313 Sum_probs=29.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
|+|+|+|||..|.+++..+++.|.+|.+++.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~ 32 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDK 32 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 6899999999999999999999999999986
No 484
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=83.30 E-value=0.74 Score=45.28 Aligned_cols=31 Identities=26% Similarity=0.307 Sum_probs=29.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
++|.|||+|.+|.-+|..|++.|.+|+++++
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~ 37 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDI 37 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeC
Confidence 6899999999999999999999999999987
No 485
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=83.25 E-value=0.98 Score=46.83 Aligned_cols=33 Identities=24% Similarity=0.178 Sum_probs=30.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 240 WPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 240 ~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
..++|+|||+|.+|...+..|.+.|.+|+++.+
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~ 43 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNAL 43 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcC
Confidence 358999999999999999999999999999985
No 486
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=83.02 E-value=0.99 Score=47.93 Aligned_cols=55 Identities=9% Similarity=0.014 Sum_probs=38.7
Q ss_pred HHHhhhcCCeEE-cceEEEEEEEeCCCcE-EEEEecCCCCCceEEEcC-EEEEccCCC
Q psy14461 287 LLSSLTKAGVSI-QCCVIEKVISSFDGMK-GVRGFHPESKEPFADVFK-TVVNAMEKK 341 (535)
Q Consensus 287 ~~~~l~~~gV~i-~~~~v~~i~~~~~~~~-~v~~~~~~~G~~~~~~~D-~vi~a~G~~ 341 (535)
+....++.|+++ +++.|++|..++++++ .|++.+..+|+..++.++ .||+|+|.-
T Consensus 215 l~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~ 272 (546)
T 2jbv_A 215 IHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAI 272 (546)
T ss_dssp TGGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHH
T ss_pred HHHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCcc
Confidence 344445679999 9999999987521444 466653112776789999 999999963
No 487
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=82.36 E-value=1.1 Score=45.33 Aligned_cols=33 Identities=24% Similarity=0.276 Sum_probs=30.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 240 WPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 240 ~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
.+.+|+|+|+|.+|..+|..+..+|.+|+++++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~ 221 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDV 221 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcC
Confidence 367999999999999999999999999998876
No 488
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=81.95 E-value=0.74 Score=48.66 Aligned_cols=77 Identities=21% Similarity=0.112 Sum_probs=54.4
Q ss_pred CCCcEEEECCChHHHH-HHHHHHhCCCcEEEEEc-CcCCccCcHHHHHHHHHhhhcCCeEE-cceEEEEEEEeCCCcEEE
Q psy14461 240 WPGKTLVLGGSLMAVE-IAATLNFLGVPVTLVYS-RRLLKHFDQEMVRILLSSLTKAGVSI-QCCVIEKVISSFDGMKGV 316 (535)
Q Consensus 240 ~~k~vvViGgG~~g~e-~A~~l~~~g~~Vtlv~~-~~~l~~~~~~~~~~~~~~l~~~gV~i-~~~~v~~i~~~~~~~~~v 316 (535)
..++|.+||-|-+|+- +|..|.++|.+|+..+. ... + ..+.|++.||++ .+...
T Consensus 18 ~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~-----~-----~~~~L~~~gi~~~~G~~~------------- 74 (524)
T 3hn7_A 18 QGMHIHILGICGTFMGSLALLARALGHTVTGSDANIYP-----P-----MSTQLEQAGVTIEEGYLI------------- 74 (524)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCCT-----T-----HHHHHHHTTCEEEESCCG-------------
T ss_pred cCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCCc-----H-----HHHHHHHCCCEEECCCCH-------------
Confidence 3689999999999997 68889999999999987 421 1 234566678877 44210
Q ss_pred EEecCCCCCceEEEcCEEEEccCCCCCCCCC
Q psy14461 317 RGFHPESKEPFADVFKTVVNAMEKKFDFAAL 347 (535)
Q Consensus 317 ~~~~~~~G~~~~~~~D~vi~a~G~~p~~~~l 347 (535)
+.....+|+|+++.|..|..+.+
T Consensus 75 --------~~~~~~~d~vV~Spgi~~~~p~l 97 (524)
T 3hn7_A 75 --------AHLQPAPDLVVVGNAMKRGMDVI 97 (524)
T ss_dssp --------GGGCSCCSEEEECTTCCTTSHHH
T ss_pred --------HHcCCCCCEEEECCCcCCCCHHH
Confidence 00012479999999998887654
No 489
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=81.89 E-value=0.97 Score=45.45 Aligned_cols=33 Identities=30% Similarity=0.285 Sum_probs=30.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 240 WPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 240 ~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
.+++|+|+|+|.+|..+|..+..+|.+|+++++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~ 215 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDV 215 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECS
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeC
Confidence 368999999999999999999999999999876
No 490
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=81.85 E-value=1.2 Score=43.56 Aligned_cols=32 Identities=19% Similarity=0.209 Sum_probs=28.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 240 WPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 240 ~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
...+|.|||+|.+|.-+|..|++.|.+|+++ +
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~ 49 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-A 49 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-C
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-E
Confidence 4578999999999999999999999999998 5
No 491
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=81.83 E-value=1.1 Score=43.44 Aligned_cols=31 Identities=35% Similarity=0.432 Sum_probs=29.5
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
++|.|||+|.+|.-+|..|++.|.+|+++++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~ 46 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQ 46 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEC
Confidence 6899999999999999999999999999987
No 492
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=81.32 E-value=1.6 Score=40.31 Aligned_cols=32 Identities=19% Similarity=0.159 Sum_probs=30.1
Q ss_pred CCcEEEECC-ChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 241 PGKTLVLGG-SLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 241 ~k~vvViGg-G~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
+++|+|.|+ |.+|..++..|.+.|.+|+++.|
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R 53 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVR 53 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEEC
Confidence 578999997 99999999999999999999998
No 493
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=81.07 E-value=1 Score=42.53 Aligned_cols=33 Identities=21% Similarity=0.244 Sum_probs=30.0
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCC-cEEEEEcC
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGV-PVTLVYSR 273 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~-~Vtlv~~~ 273 (535)
.++|+|||.|-+|.++|..|++.|. ++++++++
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d 64 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD 64 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 3789999999999999999999997 89999873
No 494
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=81.02 E-value=1.1 Score=47.41 Aligned_cols=30 Identities=20% Similarity=0.214 Sum_probs=28.8
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 243 KTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 243 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
.++|||+|..|+-+|..|++.|.+|.++++
T Consensus 9 D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~ 38 (546)
T 1kdg_A 9 DYIIVGAGPGGIIAADRLSEAGKKVLLLER 38 (546)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred eEEEECcCHHHHHHHHHHHhCCCeEEEEeC
Confidence 699999999999999999999999999987
No 495
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=80.87 E-value=1.5 Score=43.93 Aligned_cols=32 Identities=25% Similarity=0.414 Sum_probs=30.2
Q ss_pred CCcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 241 PGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 241 ~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
+++|+|+|+|.+|..+|..++..|.+|+++++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~ 197 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDV 197 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEEC
Confidence 58999999999999999999999999999986
No 496
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=80.52 E-value=1.7 Score=41.35 Aligned_cols=31 Identities=29% Similarity=0.313 Sum_probs=29.8
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
++|+|.|+|++|..++..|.+.|.+|+.+.|
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r 34 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRR 34 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 6899999999999999999999999999998
No 497
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=80.42 E-value=1.2 Score=42.59 Aligned_cols=24 Identities=17% Similarity=0.120 Sum_probs=21.5
Q ss_pred CcEEEEeCCCchhhHHHHHHHHHhc
Q psy14461 58 NRILIFTHAVLREENARAERYLNAR 82 (535)
Q Consensus 58 ~~v~v~~k~~cp~~~~~~k~~~~~~ 82 (535)
..|.+|++..|| ||.++++++.+.
T Consensus 44 ~~VelyTs~gCp-~C~~Ak~lL~~~ 67 (270)
T 2axo_A 44 GVVELFTSQGCA-SCPPADEALRKM 67 (270)
T ss_dssp CEEEEEECTTCT-TCHHHHHHHHHH
T ss_pred cEEEEEeCCCCC-ChHHHHHHHHHh
Confidence 358889999999 999999999877
No 498
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=79.80 E-value=1.4 Score=43.19 Aligned_cols=31 Identities=26% Similarity=0.199 Sum_probs=29.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 242 GKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 242 k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
.+|.|||+|.+|.-+|..|++.|.+|+++.|
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r 33 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSR 33 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeC
Confidence 5799999999999999999999999999987
No 499
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=79.77 E-value=1.4 Score=44.68 Aligned_cols=33 Identities=24% Similarity=0.349 Sum_probs=30.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 240 WPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 240 ~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
.+++|+|+|+|.+|..++..++.+|.+|+++++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~ 203 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDT 203 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcC
Confidence 368999999999999999999999999988876
No 500
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=79.43 E-value=1.8 Score=43.54 Aligned_cols=33 Identities=24% Similarity=0.309 Sum_probs=30.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHhCCCcEEEEEc
Q psy14461 240 WPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYS 272 (535)
Q Consensus 240 ~~k~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 272 (535)
.+++|+|+|+|.+|..+|..++..|.+|+++++
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~ 199 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDI 199 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeC
Confidence 368999999999999999999999999998876
Done!