RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14461
(535 letters)
>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 122
Score = 56.2 bits (135), Expect = 2e-10
Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 229 ISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYSRRLLKHFDQEMVRILL 288
IS+DDLF L PGKTLV+G S +A+E A L +G+ VT++ LL+ FDQ+M +
Sbjct: 8 ISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIG 67
Query: 289 SSLTKAGVSIQCCV----IEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNA 337
+ + G+ IE++ + G V S+E D F TV+ A
Sbjct: 68 EHMEEHGIKFIRQFVPTKIEQIEAGTPGRLKVTAKSTNSEETIEDEFNTVLLA 120
>d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase
{Crithidia fasciculata [TaxId: 5656]}
Length = 240
Score = 55.0 bits (131), Expect = 5e-09
Identities = 13/66 (19%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 347 LNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYGM 406
L L GV++ K + + +T+V NI+A+G + + +A ++ ++
Sbjct: 176 LQLEKAGVEVAKNGAIKVDAYSKTNVDNIYAIGDVT-DRVMLTPVAINEGAAFVDTVFAN 234
Query: 407 QDQLMD 412
+ + D
Sbjct: 235 KPRATD 240
>d1v59a3 d.87.1.1 (A:356-478) Dihydrolipoamide dehydrogenase
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 123
Score = 51.6 bits (123), Expect = 9e-09
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Query: 413 YSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVC 472
Y+ +P V+ E VG +EE + I K + E FVK++
Sbjct: 1 YNNIPSVMYSHPEVAWVGKTEEQLKEAGIDY--KIGKFPFAANSRAKTNQDTEGFVKILI 58
Query: 473 LKGGERVLGIHVIG 486
ER+LG H+IG
Sbjct: 59 DSKTERILGAHIIG 72
>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 223
Score = 52.5 bits (125), Expect = 2e-08
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 347 LNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYGM 406
L L IG+ + + + +++ +TSV NIFA+G IV P A A+ ++ E + G
Sbjct: 158 LGLEQIGIKMTNRGLIEVDQQCRTSVPNIFAIGDIV-PGPALAHKASYEGKVAAEAIAG- 215
Query: 407 QDQLMDY 413
+DY
Sbjct: 216 HPSAVDY 222
>d3lada3 d.87.1.1 (A:349-472) Dihydrolipoamide dehydrogenase
{Azotobacter vinelandii [TaxId: 354]}
Length = 124
Score = 50.3 bits (120), Expect = 2e-08
Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 25/123 (20%)
Query: 413 YSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVC 472
Y +P V+ E VG +E+A V +
Sbjct: 1 YDLIPAVIYTHPEIAGVGKTEQALKAEG-----------------------VAINVGVFP 37
Query: 473 LKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAEL 532
R + + FVK++ +RVLG+HVIG + A ++ ++A+ + +L
Sbjct: 38 FAASGRAMAAN--DTAGFVKVIADAKTDRVLGVHVIGPSAAELVQQGAIAMEFGTSAEDL 95
Query: 533 DGT 535
Sbjct: 96 GMM 98
>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin
reductase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 235
Score = 51.3 bits (121), Expect = 7e-08
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 358 KKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYGMQDQLMD 412
K + +++QT+V I+A+G I+ GK +A + RL+ +RLYG D
Sbjct: 181 KTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLYGGSTVKCD 235
>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 221
Score = 49.5 bits (117), Expect = 3e-07
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 347 LNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYG 405
L+L+ +G+ K +++ +E T+V I+AV G V GK +A + R + RL+
Sbjct: 156 LSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAV-GDVCGKALLTPVAIAAGRKLAHRLFE 213
>d1mo9a3 d.87.1.1 (A:384-523) NADH-dependent 2-ketopropyl coenzyme M
oxidoreductase/carboxylase {Xanthobacter sp., py2
[TaxId: 35809]}
Length = 140
Score = 47.4 bits (112), Expect = 4e-07
Identities = 21/119 (17%), Positives = 35/119 (29%), Gaps = 9/119 (7%)
Query: 417 PVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCLKGG 476
P + E +GM EE A + N+ P +
Sbjct: 5 PDFLHTHYEVSFLGMGEEEARAAGHEIVTIKMPPDTENGLNVALPASDRTMLYAFGKGTA 64
Query: 477 ERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535
+ F K+V +VLG H +G ++ +++ LT EL
Sbjct: 65 H---------MSGFQKIVIDAKTRKVLGAHHVGYGAKDAFQYLNVLIKQGLTVDELGDM 114
>d1gesa3 d.87.1.1 (A:336-450) Glutathione reductase {Escherichia
coli [TaxId: 562]}
Length = 115
Score = 46.7 bits (110), Expect = 4e-07
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 23/123 (18%)
Query: 413 YSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVC 472
YS +P VV GTVG++E A + YG D + +YKSS+
Sbjct: 1 YSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTAMYT--------------- 45
Query: 473 LKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAEL 532
+ Q +KLVC+ E+++GIH IG + M+ G+++AL+ TK +
Sbjct: 46 --------AVTTHRQPCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDF 97
Query: 533 DGT 535
D T
Sbjct: 98 DNT 100
>d1dxla3 d.87.1.1 (A:348-470) Dihydrolipoamide dehydrogenase {Garden
pea (Pisum sativum) [TaxId: 3888]}
Length = 123
Score = 46.1 bits (109), Expect = 6e-07
Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Query: 413 YSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVC 472
Y +P VV + E +VG +EE + + K + E VK++
Sbjct: 1 YDKVPGVVYTNPEVASVGKTEEQVKETGVE--YRVGKFPFMANSRAKAIDNAEGLVKIIA 58
Query: 473 LKGGERVLGIHVI 485
K +++LG+H++
Sbjct: 59 EKETDKILGVHIM 71
>d1onfa3 d.87.1.1 (A:377-495) Glutathione reductase {Plasmodium
falciparum [TaxId: 5833]}
Length = 119
Score = 45.6 bits (107), Expect = 1e-06
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 19/123 (15%)
Query: 413 YSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVC 472
Y +P V+ GT+G+SEEAA ++YG + + IY+S +
Sbjct: 1 YKLIPTVIFSHPPIGTIGLSEEAAIQIYGKENVKIYESKFTNLFF--------------- 45
Query: 473 LKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAEL 532
+ + ++KLVC+ E + G+H+IG N ++ G+++AL+ TK +
Sbjct: 46 ----SVYDIEPELKEKTYLKLVCVGKDELIKGLHIIGLNADEIVQGFAVALKMNATKKDF 101
Query: 533 DGT 535
D T
Sbjct: 102 DET 104
>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 221
Score = 46.7 bits (110), Expect = 2e-06
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 347 LNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYG 405
LNL IGV+ K ++ NE+ T+V ++A+G ++ G P A A +E L G
Sbjct: 158 LNLDKIGVETDKLGRILVNERFSTNVSGVYAIGDVIPG-PMLAHKAEEDGVACVEYLAG 215
>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide
dehydrogenase {Neisseria meningitidis [TaxId: 487]}
Length = 229
Score = 46.8 bits (110), Expect = 2e-06
Identities = 17/93 (18%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Query: 313 MKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSV 372
P ++ ++ A + + ++ GV + + ++ +++ +T+V
Sbjct: 132 GDAYEQAAPTGEKKIVAFKNCIIAAGSRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNV 191
Query: 373 GNIFAVGGIVHGKPNNASMAAISARLIIERLYG 405
+I+A+G IV G+P A A + E G
Sbjct: 192 PHIYAIGDIV-GQPMLAHKAVHEGHVAAENCAG 223
>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 233
Score = 45.6 bits (107), Expect = 4e-06
Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Query: 337 AMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISA 396
+ ++ A L IG+++ K+ +V +++ + +I VG + G P A A
Sbjct: 160 FVGRRPYIAGLGAEKIGLEVDKRGRLVIDDQFNSKFPHIKVVGDVTFG-PMLAHKAEEEG 218
Query: 397 RLIIERLYGM 406
+E L
Sbjct: 219 IAAVEMLKTG 228
>d1h6va3 d.87.1.1 (A:367-499) Mammalian thioredoxin reductase {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 133
Score = 43.2 bits (101), Expect = 1e-05
Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 21/123 (17%)
Query: 413 YSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVC 472
Y +P V +E+G G+SEE A + +G + + +Y S + +
Sbjct: 1 YDNVPTTVFTPLEYGCCGLSEEKAVEKFGEENIEVYHSFFWPLEW-------------TV 47
Query: 473 LKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAEL 532
VI LK ERV+G HV+G N + G++ AL+ LTK +L
Sbjct: 48 PSRDNNKCYAKVI--------CNLKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKQQL 99
Query: 533 DGT 535
D T
Sbjct: 100 DST 102
>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase
{Azotobacter vinelandii [TaxId: 354]}
Length = 229
Score = 44.7 bits (104), Expect = 1e-05
Identities = 20/134 (14%), Positives = 48/134 (35%), Gaps = 2/134 (1%)
Query: 278 HFDQEMVRILLSSLTKAGVS-IQCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVN 336
+ + + S + GV+ + + E +
Sbjct: 96 QIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPV 155
Query: 337 AMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISA 396
+ ++ L GV + ++ ++ ++ TSV ++A+G +V G A A+
Sbjct: 156 EIPRRPVTTDLLAADSGVTLDERGFIYVDDYCATSVPGVYAIGDVVRG-AMLAHKASEEG 214
Query: 397 RLIIERLYGMQDQL 410
++ ER+ G + Q+
Sbjct: 215 VVVAERIAGHKAQM 228
>d1aoga1 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductase
{Trypanosoma cruzi [TaxId: 5693]}
Length = 238
Score = 44.3 bits (103), Expect = 1e-05
Identities = 20/113 (17%), Positives = 37/113 (32%), Gaps = 2/113 (1%)
Query: 295 GVSIQCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGV 354
G + E++ + L L + GV
Sbjct: 124 GWGSLESKNVVNVRESADPASAVKERLETEHILLASGSWPHMPNGRSPRTKDLQLQNAGV 183
Query: 355 DIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYGMQ 407
IK V +E +T+V NI+A+ G V + +A A +++ ++G
Sbjct: 184 MIKN-GGVQVDEYSRTNVSNIYAI-GDVTNRVMLTPVAINEAAALVDTVFGTT 234
>d1xdia1 c.3.1.5 (A:2-161,A:276-348) Dihydrolipoamide dehydrogenase
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 233
Score = 43.5 bits (101), Expect = 2e-05
Identities = 15/75 (20%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Query: 331 FKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNAS 390
+ + + L L +G+ + + +Y+ + +T I+A G G AS
Sbjct: 153 ASPRILPSGSVPNTSGLGLERVGIQLGRGNYLTVDRVSRTLATGIYAAGDCT-GLLPLAS 211
Query: 391 MAAISARLIIERLYG 405
+AA+ R+ + G
Sbjct: 212 VAAMQGRIAMYHALG 226
>d3grsa3 d.87.1.1 (A:364-478) Glutathione reductase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 115
Score = 41.4 bits (96), Expect = 3e-05
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 413 YSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVC 472
Y+ +P VV GTVG++E+ A YG + + Y +S+ + + + +K+VC
Sbjct: 1 YNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVC 60
Query: 473 LKGGERVLGIHVIGQN 488
E+V+GIH+ G
Sbjct: 61 ANKEEKVVGIHMQGLG 76
>d1ebda3 d.87.1.1 (A:347-461) Dihydrolipoamide dehydrogenase
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 115
Score = 39.7 bits (92), Expect = 1e-04
Identities = 25/119 (21%), Positives = 40/119 (33%), Gaps = 25/119 (21%)
Query: 417 PVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCLKGG 476
P VV D E +VG E+ A + + L
Sbjct: 3 PAVVFSDPECASVGYFEQQAKDEGIDVIAAKFPFAANGR----------------ALALN 46
Query: 477 ERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535
+ + F+KLV K ++G +IG N + MI LA+ +T ++ T
Sbjct: 47 D---------TDGFLKLVVRKEDGVIIGAQIIGPNASDMIAELGLAIEAGMTAEDIALT 96
>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl
coenzyme M oxidoreductase/carboxylase {Xanthobacter sp.,
py2 [TaxId: 35809]}
Length = 261
Score = 41.5 bits (96), Expect = 1e-04
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 350 HHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYGMQDQ 409
+G+D+ K V+ NE QTSV N++AVG ++ G P A S + G +
Sbjct: 201 KILGLDLGPKGEVLVNEYLQTSVPNVYAVGDLIGG-PMEMFKARKSGCYAARNVMGEK-- 257
Query: 410 LMDYS 414
+ Y+
Sbjct: 258 -ISYT 261
>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium
falciparum [TaxId: 5833]}
Length = 117
Score = 39.3 bits (91), Expect = 1e-04
Identities = 21/101 (20%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Query: 229 ISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVY-SRRLLKHFDQEMVRIL 287
IS+D+ F + K ++G +AVE+ + LG+ + R+L+ FD+ ++ +L
Sbjct: 11 ISSDEFFNI-KESKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRKFDESVINVL 69
Query: 288 LSSLTKAGVSIQC-CVIEKVISSFDGMKGVRGFHPESKEPF 327
+ + K ++I + ++ D + E F
Sbjct: 70 ENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHF 110
>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase
{Escherichia coli [TaxId: 562]}
Length = 217
Score = 41.1 bits (95), Expect = 1e-04
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 347 LNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYGM 406
+NL GV +K Y+V ++ T++ I+AVG +A + R + ERL+
Sbjct: 152 INLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGDNTGA-VELTPVAVAAGRRLSERLFNN 210
Query: 407 QD 408
+
Sbjct: 211 KP 212
>d1nhpa3 d.87.1.1 (A:322-447) NADH peroxidase {Enterococcus faecalis
[TaxId: 1351]}
Length = 126
Score = 39.1 bits (91), Expect = 2e-04
Identities = 20/114 (17%), Positives = 39/114 (34%), Gaps = 27/114 (23%)
Query: 423 DVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCLKGGERVLGI 482
D +F + G++E A K+ K+ D ++
Sbjct: 12 DYKFASTGINEVMAQKLGKE-----TKAVTVVEDY---------------------LMDF 45
Query: 483 HVIGQNNFVKLVCLKGGERVLGIHVIGQNVAG-MIFGYSLALRKFLTKAELDGT 535
+ Q + KLV ++LG ++ + I SLA++ +T +L
Sbjct: 46 NPDKQKAWFKLVYDPETTQILGAQLMSKADLTANINAISLAIQAKMTIEDLAYA 99
>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli
[TaxId: 562]}
Length = 116
Score = 38.2 bits (88), Expect = 3e-04
Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 2/97 (2%)
Query: 223 PRNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPV-TLVYSRRLLKHFDQ 281
P I +D F L A P + V+G + VE+ +N LG L FD
Sbjct: 3 PGVEYGIDSDGFFALPALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPSFDP 62
Query: 282 EMVRILLSSLTKAGVSIQC-CVIEKVISSFDGMKGVR 317
+ L+ + G + + + V+ + DG +
Sbjct: 63 MISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLE 99
>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 37.5 bits (86), Expect = 7e-04
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 223 PRNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYSRRLLKHFDQE 282
P S I++D F+L PG+++++G +AVE+A L+ LG +L+ +
Sbjct: 4 PGASLGITSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDS 63
Query: 283 MV-RILLSSLTKAGVSIQC-CVIEKVISSFDGMK 314
M+ L AGV + +++V + G++
Sbjct: 64 MISTNCTEELENAGVEVLKFSQVKEVKKTLSGLE 97
>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase
{Pseudomonas putida [TaxId: 303]}
Length = 220
Score = 38.8 bits (89), Expect = 8e-04
Identities = 19/107 (17%), Positives = 41/107 (38%), Gaps = 2/107 (1%)
Query: 299 QCCVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVDIKK 358
V+ DG + E + + ++ NL + + +
Sbjct: 110 GVKVVHGWAKVLDGKQVEVDGQRIQCEHLLLATGSSSVELPRRPRTKGFNLECLDLKMNG 169
Query: 359 KSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAISARLIIERLYG 405
+ + +E+ QTS+ N++A+G + G+P A A ++ E + G
Sbjct: 170 AAIAI-DERCQTSMHNVWAIGDVA-GEPMLAHRAMAQGEMVAEIIAG 214
>d1ojta3 d.87.1.1 (A:471-598) Dihydrolipoamide dehydrogenase
{Neisseria meningitidis [TaxId: 487]}
Length = 128
Score = 37.3 bits (86), Expect = 0.001
Identities = 20/121 (16%), Positives = 33/121 (27%), Gaps = 25/121 (20%)
Query: 415 FLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCLK 474
+P V E VG +E +A + +
Sbjct: 3 VIPGVAYTSPEVAWVGETELSAKASARKITKANFPWAASGRAIANGC------------- 49
Query: 475 GGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDG 534
F KL+ R++G ++G N MI LA+ A++
Sbjct: 50 ------------DKPFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADIGK 97
Query: 535 T 535
T
Sbjct: 98 T 98
>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase
{Neisseria meningitidis [TaxId: 487]}
Length = 125
Score = 37.1 bits (85), Expect = 0.001
Identities = 20/96 (20%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
Query: 223 PRNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVY-SRRLLKHFDQ 281
P + +I + L PGK L++GG ++ +E+ + LG + +V L++ D+
Sbjct: 8 PEDPRIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGADR 67
Query: 282 EMVRILLSSLTKAGVSIQCCVIEKVISSFDGMKGVR 317
++V++ +I K ++ GV
Sbjct: 68 DLVKVWQKQNEYRFDNIMVN--TKTVAVEPKEDGVY 101
>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden
pea (Pisum sativum) [TaxId: 3888]}
Length = 123
Score = 36.0 bits (82), Expect = 0.002
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 229 ISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLV-YSRRLLKHFDQEMVRIL 287
+S+ L P K +V+G + +E+ + +G VT+V ++ ++ D E+ +
Sbjct: 13 VSSTGALALSEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPTMDAEIRKQF 72
Query: 288 LSSLTKAGVSIQC-CVIEKVISSFDGMK 314
SL K G+ + + V +S DG+K
Sbjct: 73 QRSLEKQGMKFKLKTKVVGVDTSGDGVK 100
>d1feca3 d.87.1.1 (A:358-485) Trypanothione reductase {Crithidia
fasciculata [TaxId: 5656]}
Length = 128
Score = 35.8 bits (82), Expect = 0.003
Identities = 22/113 (19%), Positives = 38/113 (33%), Gaps = 16/113 (14%)
Query: 413 YSFLPVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVC 472
++ + V G G EE AAK Y V S P N+ + V++V
Sbjct: 1 HTKVACAVFSIPPMGVCGYVEEDAAKKYD-QVAVYESSFTPLMHNISGSTYKKFMVRIVT 59
Query: 473 LKGGERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQN------VAGMIFGY 519
VLG+H++G + E + + + + I +
Sbjct: 60 NHADGEVLGVHMLGDS---------SPEIIQSVAICLKMGAKISDFYNTIGVH 103
>d1lvla3 d.87.1.1 (A:336-458) Dihydrolipoamide dehydrogenase
{Pseudomonas putida [TaxId: 303]}
Length = 123
Score = 35.5 bits (81), Expect = 0.004
Identities = 18/119 (15%), Positives = 39/119 (32%), Gaps = 25/119 (21%)
Query: 417 PVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCLKGG 476
V D E VG + E A++ + + + L+
Sbjct: 5 AAVCFTDPEVVVVGKTPEQASQQGLDCIVAQFPFAANGRAMSLES--------------- 49
Query: 477 ERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535
++ FV++V + +LG +G V+ + ++ +L ++ GT
Sbjct: 50 ----------KSGFVRVVARRDNHLILGWQAVGVAVSELSTAFAQSLEMGACLEDVAGT 98
>d1xdia2 d.87.1.1 (A:349-466) Dihydrolipoamide dehydrogenase
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 118
Score = 35.1 bits (80), Expect = 0.004
Identities = 18/119 (15%), Positives = 35/119 (29%), Gaps = 25/119 (21%)
Query: 417 PVVVRGDVEFGTVGMSEEAAAKVYGADGLVIYKSSYPTFDNLLDPLLPENFVKLVCLKGG 476
V E VG+ + A ++
Sbjct: 5 AATVFTRPEIAAVGVPQSVIDAGSVAARTIMLPLRTNARA-------------------- 44
Query: 477 ERVLGIHVIGQNNFVKLVCLKGGERVLGIHVIGQNVAGMIFGYSLALRKFLTKAELDGT 535
++ FVK+ C + V+G V+ + +I ++A++ +T EL T
Sbjct: 45 -----KMSEMRHGFVKIFCRRSTGVVIGGVVVAPIASELILPIAVAVQNRITVNELAQT 98
>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma
cruzi [TaxId: 5693]}
Length = 117
Score = 35.2 bits (80), Expect = 0.004
Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 5/100 (5%)
Query: 223 PRNSALISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVP---VTLVYSR-RLLKH 278
P IS+++ F L P + L +GG ++VE A N VTL Y +L+
Sbjct: 2 PGIEHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEMILRG 61
Query: 279 FDQEMVRILLSSLTKAGVSIQC-CVIEKVISSFDGMKGVR 317
FD + L LT G+ I KV + DG K V
Sbjct: 62 FDHTLREELTKQLTANGIQILTKENPAKVELNADGSKSVT 101
>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase,
BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Length = 121
Score = 35.1 bits (80), Expect = 0.005
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 228 LISADDLFRLGAW---PGKTLVLGGSLMAVEIAATLNFLGVPVTLVY--SRRLLKHFDQE 282
L + +D R+ A + L++GG ++ +E+AAT GV V+LV R + +
Sbjct: 14 LRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPAT 73
Query: 283 MVRILLSSLTKAGVSIQC 300
+ + GV ++
Sbjct: 74 LADFVARYHAAQGVDLRF 91
>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase
{Pyrococcus furiosus [TaxId: 2261]}
Length = 167
Score = 35.9 bits (81), Expect = 0.006
Identities = 20/169 (11%), Positives = 45/169 (26%), Gaps = 10/169 (5%)
Query: 243 KTLVLGGSLMAVEIAATLNFLGVPVTLVYSRRLLKHFDQEMVRILLSSLTKAGVSIQCCV 302
K +++G E+A L+ VT++ + + + +
Sbjct: 2 KVVIVGNGPGGFELAKQLS-QTYEVTVIDKEPVPYYSKPMLSHY---IAGFIPRNRLFPY 57
Query: 303 IEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIGVD---IKKK 359
+ V A + I
Sbjct: 58 SLDWYRKRGIEIRLAEEAKLIDRGRKVVITEKGEVPYDTLVLATGAPNVDLARRSGIHTG 117
Query: 360 SYVVCNEKDQTSVGNIFAVGGIVHGK---PNNASMAAISARLIIERLYG 405
++ ++ +TS +++A+G A A AR++ + L G
Sbjct: 118 RGILIDDNFRTSAKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILKG 166
>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase
{Pseudomonas putida [TaxId: 303]}
Length = 185
Score = 35.5 bits (80), Expect = 0.007
Identities = 28/178 (15%), Positives = 52/178 (29%), Gaps = 17/178 (9%)
Query: 245 LVLGGSLMAVEIAATLNFLGVPVTLVY---SRRLLKHFDQEMVRILLSSLTKAGVSI-QC 300
+++G L VE+A L G + + + H L T + +
Sbjct: 7 VIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTP 66
Query: 301 CVIEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIG----VDI 356
G V + + ++ + + + + +
Sbjct: 67 DAYAAQNIQLLGGTQVTAINRDRQQVILSDGRALDYDRLVLATGGRPLIPNCELASAAGL 126
Query: 357 KKKSYVVCNEKDQTSVGNIFAVG------GIVHGKPNN---ASMAAISARLIIERLYG 405
+ + +V NE QTS I AVG ++ + A AR I L G
Sbjct: 127 QVDNGIVINEHMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCG 184
>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase
{Plasmodium falciparum [TaxId: 5833]}
Length = 259
Score = 36.2 bits (82), Expect = 0.007
Identities = 19/117 (16%), Positives = 42/117 (35%), Gaps = 8/117 (6%)
Query: 330 VFKTVVNAMEKKFDFAALNLHHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNA 389
+ + + D L L + V+ VV +E +TSV NI+AVG +
Sbjct: 145 LIAVGNKPVGRSPDTENLKLEKLNVETNNNYIVV-DENQRTSVNNIYAVGDCC-MVKKSK 202
Query: 390 SMAAISARLIIERLYGMQDQLMDYSFLPVVVRGDVEFGTVGMSEE--AAAKVYGADG 444
+ ++ + + L + + +V+ V ++ A +++
Sbjct: 203 EIEDLNLLKLYNE----ERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFLKKT 255
>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase
subunit F (AhpF), C-terminal domains {Escherichia coli
[TaxId: 562]}
Length = 184
Score = 34.7 bits (78), Expect = 0.012
Identities = 26/162 (16%), Positives = 46/162 (28%), Gaps = 11/162 (6%)
Query: 245 LVLGGSLMAVEIAATLNFLGVPVTLVYSRRLLKHFDQEMVRILLSS-------LTKAGVS 297
L++G A G+ L+ R + D + +S L A
Sbjct: 5 LIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKV 64
Query: 298 IQCCVIEKVISSFDGMKGV----RGFHPESKEPFADVFKTVVNAMEKKFDFAALNLHHIG 353
VI S K + G + + V K + N
Sbjct: 65 HVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKLPNTNWLEGA 124
Query: 354 VDIKKKSYVVCNEKDQTSVGNIFAVGGIVHGKPNNASMAAIS 395
V+ + ++ + K +T+V +FA G +A
Sbjct: 125 VERNRMGEIIIDAKCETNVKGVFAAGDCTTVPYKQIIIATGE 166
>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus
faecalis [TaxId: 1351]}
Length = 198
Score = 34.8 bits (78), Expect = 0.015
Identities = 28/191 (14%), Positives = 52/191 (27%), Gaps = 28/191 (14%)
Query: 243 KTLVLGGSLMAVEIAATLNFLG--VPVTLVYSRRLL--------------KHFDQEMVRI 286
K +VLG S E L L + + + +
Sbjct: 2 KVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYM 61
Query: 287 LLSSLTKAGVSIQCCVIEKVISSFD-GMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFA 345
+ GV++ I + + E + D A+ + D
Sbjct: 62 TGEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDGV 121
Query: 346 ALNL--HHIGVDIKKKSYVVCNEKDQTSVGNIFAVGGIV------HGKPNN---ASMAAI 394
N +++ + +E +TS ++FAVG N A+ A
Sbjct: 122 RPNTAWLKGTLELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNARK 181
Query: 395 SARLIIERLYG 405
R ++ L
Sbjct: 182 QGRFAVKNLEE 192
>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin
reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Length = 183
Score = 33.9 bits (76), Expect = 0.021
Identities = 18/152 (11%), Positives = 40/152 (26%), Gaps = 6/152 (3%)
Query: 239 AWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYSRRLLKHFDQEMVRILLSSLTKAGVSI 298
A +VLG L +V A L G + + I
Sbjct: 1 ALKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKI 60
Query: 299 QCCV-----IEKVISSFDGMKGVRGFHPESKEPFADVFKTVVNAMEKKFDFAALNL-HHI 352
+ +E ++ + + + T+V A N
Sbjct: 61 RLDCKRAPEVEWLLGVTAQSFDPQAHTVALSDGRTLPYGTLVLATGAAPRAVLANDALAR 120
Query: 353 GVDIKKKSYVVCNEKDQTSVGNIFAVGGIVHG 384
+ + + +T+ +++A+G +
Sbjct: 121 AAGLACDDGIFVDAYGRTTCPDVYALGDVTRQ 152
>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 122
Score = 32.9 bits (74), Expect = 0.027
Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 229 ISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYSR-RLLKHFDQEMVRIL 287
+S+ L P + ++GG ++ +E+ + + LG VT+V + ++ D E+ +
Sbjct: 11 VSSTGALSLKEIPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASMDGEVAKAT 70
Query: 288 LSSLTKAGVSI 298
L K G+
Sbjct: 71 QKFLKKQGLDF 81
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide
dehydrogenase, FCSD, flavin-binding subunit {Purple
phototrophic bacterium (Chromatium vinosum) [TaxId:
1049]}
Length = 186
Score = 33.2 bits (74), Expect = 0.044
Identities = 15/179 (8%), Positives = 39/179 (21%), Gaps = 16/179 (8%)
Query: 243 KTLVLGGSLMAVEIAATLNFLG--VPVTLVYSRRLLKHFDQEMVRILLSSLTKAGVSIQC 300
K +V+GG A + + VTL+ + ++ +
Sbjct: 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLI-EPNTDYYTCYLSNEVIGGDRKLESIKHGY 62
Query: 301 CVIEKVISSFDGMKGVRGFHPESKEPFADV----FKTVVNAMEKKFDFAALNLHHIGVDI 356
+ + A + V A + + + +
Sbjct: 63 DGLRAHGIQVVHDSATGIDPDKKLVKTAGGAEFGYDRCVVAPGIELIYDKIEQRAGKIAQ 122
Query: 357 KKKSYVV-------CNEKDQTSVGNIFAVGGIVHGK--PNNASMAAISARLIIERLYGM 406
+ + I +G P + A ++ + +
Sbjct: 123 IAGLTNDAGWCPVDIKTFESSIHKGIHVIGDASIANPMPKSGYSANSQGKVAAAAVVVL 181
>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase
{Azotobacter vinelandii [TaxId: 354]}
Length = 119
Score = 32.0 bits (72), Expect = 0.049
Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Query: 228 LISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLG-VPVTLVYSRRLLKHFDQEMVRI 286
++ + PGK V+G ++ +E+ + LG L + L D+++ +
Sbjct: 9 IVDSTGALDFQNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPAVDEQVAKE 68
Query: 287 LLSSLTKAGVSIQCCVIEKVISSFDGMKGVR 317
LTK G ++ + +V + K V
Sbjct: 69 AQKILTKQG--LKILLGARVTGTEVKNKQVT 97
>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia
fasciculata [TaxId: 5656]}
Length = 117
Score = 30.9 bits (69), Expect = 0.11
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Query: 229 ISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNFLGVPVTLVYSR----RLLKHFDQEMV 284
I++++ F L P + L +GG +++E A N V +L+ FD E+
Sbjct: 6 ITSNEAFYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELR 65
Query: 285 RILLSSLTKAGVSIQC-CVIEKVISSFDGMKGVR 317
+ L L G++++ KV + DG + V
Sbjct: 66 KQLTEQLRANGINVRTHENPAKVTKNADGTRHVV 99
>d2z15a1 d.370.1.1 (A:10-126) TOB1, N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 117
Score = 28.9 bits (65), Expect = 0.55
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Query: 252 MAVEIAATLNFLGVPVTLVY---SRRLLKHFDQEMVRIL 287
M +EI LNF+ ++ +Y RR + F +E+ R+L
Sbjct: 1 MQLEIQVALNFI---ISYLYNKLPRRRVNIFGEELERLL 36
>d1vg0a1 c.3.1.3 (A:3-444,A:558-606) Rab escort protein 1 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 491
Score = 29.7 bits (66), Expect = 1.1
Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Query: 463 LPENFVKLVCLKGGERVLG-----IHVIGQNNFVKLVCLKGGERVLGIHVIG 509
LP+ F ++ + GG L + V ++ K V + G+R++ H I
Sbjct: 378 LPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFII 429
>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase
{Pseudomonas putida [TaxId: 303]}
Length = 115
Score = 27.8 bits (61), Expect = 1.3
Identities = 8/34 (23%), Positives = 15/34 (44%)
Query: 229 ISADDLFRLGAWPGKTLVLGGSLMAVEIAATLNF 262
IS+ + A P +V+GG + +E+
Sbjct: 9 ISSTEALAPKALPQHLVVVGGGYIGLELGIAYRK 42
>d3e9va1 d.370.1.1 (A:9-128) NGF-inducible anti-proliferative
protein PC3 (BTG2) {Human (Homo sapiens) [TaxId: 9606]}
Length = 120
Score = 27.4 bits (61), Expect = 1.7
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 8/41 (19%)
Query: 252 MAVEIAATLNFLGVPVTLVY-----SRRLLKHFDQEMVRIL 287
M EIAA + FL +L+ S + LK F + L
Sbjct: 2 MLPEIAAAVGFL---SSLLRTRGCVSEQRLKVFSGALQEAL 39
>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 137
Score = 27.8 bits (61), Expect = 1.9
Identities = 14/101 (13%), Positives = 32/101 (31%), Gaps = 9/101 (8%)
Query: 231 ADDLFRLGAWPGKTLVLGGSLMAVEIAATLN----FLGVPVTLVYSRRLL--KHFDQEMV 284
L ++ ++GG + E+A L LG V ++ + K + +
Sbjct: 27 FRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLS 86
Query: 285 RILLSSLTKAGVSIQCCVIEKVISSFDGMKGVRGFHPESKE 325
+ + + GV + ++ S G +
Sbjct: 87 NWTMEKVRREGVKVMP---NAIVQSVGVSSGKLLIKLKDGR 124
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase
{Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Length = 373
Score = 28.3 bits (61), Expect = 2.4
Identities = 19/143 (13%), Positives = 43/143 (30%), Gaps = 16/143 (11%)
Query: 277 KHFDQEMVRILLSSLTKAGVSIQCCV----IEKVISSFDGMKGVRGFHPESKEPFADVFK 332
Q + + L + + + V S + P ++ + F
Sbjct: 227 LGGMQTLTDAICKDLREDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFD 286
Query: 333 TVVNA--------MEKKFDFAALNLHHIG--VDIKKKSYVVCNEKDQTSVGNIFAVGGIV 382
V+ M+ L+ I S + +K + ++ +F G
Sbjct: 287 AVIMTAPLCDVKSMKIAKRGNPFLLNFIPEVYGHNYDSVLDAIDKMEKNLPGLFYAGNHR 346
Query: 383 HGKPNNASMAA--ISARLIIERL 403
G ++++ +A L+I L
Sbjct: 347 GGLSVGKALSSGCNAADLVISYL 369
>d2hiya1 d.356.1.1 (A:1-180) Hypothetical protein SP0830
{Streptococcus pneumoniae [TaxId: 1313]}
Length = 180
Score = 27.6 bits (61), Expect = 2.8
Identities = 13/113 (11%), Positives = 29/113 (25%), Gaps = 3/113 (2%)
Query: 53 RLSYENRILIFTHAVLREENARAERYLNARGDRFAVLYLDRIGDEGILLEEELKRQTNQR 112
+ + + E + + R L+ D ++ +
Sbjct: 67 HYPFIQSFSLLSLEDFEAELENLPAWWSRDLARKDFLFYTEGLDVDQVIATVESLELKDE 126
Query: 113 RDELQERGSHLSFRKKRRLYYPVAMSDLELEQDSTSALNVTIRNWNAATKLIK 165
+ G + Y A L+ ++TIRN K+ +
Sbjct: 127 VLYFGKLGIFWGKFSEES-YSKTAYHKYLLK--VPFYRHITIRNAKTFDKIGQ 176
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea
mays) [TaxId: 4577]}
Length = 347
Score = 27.6 bits (59), Expect = 4.1
Identities = 8/44 (18%), Positives = 14/44 (31%), Gaps = 2/44 (4%)
Query: 369 QTSVGNIFAVGGIVHGK-PNNASMAAISARLIIERLYG-MQDQL 410
+ VG ++ G A +S E L Q ++
Sbjct: 303 RAPVGRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILINCAQKKM 346
>d1nrja_ d.110.4.4 (A:) Srx domain of the signal recognition
particle receptor alpha-subunit {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 155
Score = 26.1 bits (57), Expect = 6.5
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 127 KKRRLYYPV--AMSDLELEQDSTSALNVTIRNWNA 159
K+ LY+ V A LEL Q++ L + ++ WN+
Sbjct: 81 KQPELYFVVTFAEQTLELNQETQQTLALVLKLWNS 115
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 311
Score = 26.4 bits (57), Expect = 8.3
Identities = 9/53 (16%), Positives = 17/53 (32%), Gaps = 10/53 (18%)
Query: 361 YVVCNEKDQTSVGNIFAVG---GIVHGKPNN-----ASMAA--ISARLIIERL 403
VV + V N++ G + G A + +A I++
Sbjct: 257 DVVIHSGAYAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHF 309
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.138 0.398
Gapped
Lambda K H
0.267 0.0600 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,976,999
Number of extensions: 94335
Number of successful extensions: 367
Number of sequences better than 10.0: 1
Number of HSP's gapped: 356
Number of HSP's successfully gapped: 63
Length of query: 535
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 445
Effective length of database: 1,171,896
Effective search space: 521493720
Effective search space used: 521493720
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.2 bits)