RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy14466
         (231 letters)



>d1d02a_ c.52.1.8 (A:) Restriction endonuclease MunI {Mycoplasma,
           unidentified species [TaxId: 2093]}
          Length = 197

 Score = 24.9 bits (54), Expect = 8.9
 Identities = 9/22 (40%), Positives = 11/22 (50%)

Query: 73  RNNNHYSFLKYFGPGVLKKVQE 94
           R N H    K F PG+LK  + 
Sbjct: 110 RGNAHERSCKLFTPGLLKAYRT 131


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.322    0.137    0.400 

Gapped
Lambda     K      H
   0.267   0.0489    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 842,173
Number of extensions: 37793
Number of successful extensions: 100
Number of sequences better than 10.0: 1
Number of HSP's gapped: 100
Number of HSP's successfully gapped: 6
Length of query: 231
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 149
Effective length of database: 1,281,736
Effective search space: 190978664
Effective search space used: 190978664
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.0 bits)