Your job contains 1 sequence.
>psy14468
MTRSTSTALQAIFLSLDATELVKTFNYVHSDMKVPHERILEFPNILTSRRFRIENRHSYL
KSLGRDQYDPCKENYVSMKSLVSGTDAEFCANVAKTTPETYNLFLKSL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14468
(108 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0037008 - symbol:mTerf3 species:7227 "Drosophila m... 245 8.0e-21 1
UNIPROTKB|F1RY61 - symbol:MTERFD1 "Uncharacterized protei... 231 7.4e-19 1
UNIPROTKB|G3V130 - symbol:MTERFD1 "mTERF domain-containin... 226 8.3e-19 1
UNIPROTKB|Q1LZE3 - symbol:MTERFD1 "Uncharacterized protei... 226 2.7e-18 1
UNIPROTKB|E2RL82 - symbol:MTERFD1 "Uncharacterized protei... 226 2.7e-18 1
UNIPROTKB|Q96E29 - symbol:MTERFD1 "mTERF domain-containin... 226 2.7e-18 1
RGD|735158 - symbol:Mterfd1 "MTERF domain containing 1" s... 224 4.3e-18 1
MGI|MGI:1913660 - symbol:Mterfd1 "MTERF domain containing... 218 2.0e-17 1
UNIPROTKB|F1P3M7 - symbol:MTERFD1 "mTERF domain-containin... 208 2.5e-16 1
UNIPROTKB|Q5ZJC8 - symbol:MTERFD1 "mTERF domain-containin... 208 2.5e-16 1
ZFIN|ZDB-GENE-040718-359 - symbol:mterfd1 "MTERF domain c... 194 8.5e-15 1
MGI|MGI:1918355 - symbol:Mterfd2 "MTERF domain containing... 100 0.00012 1
UNIPROTKB|B4DFP7 - symbol:MTERFD2 "cDNA FLJ59868, highly ... 95 0.00012 1
RGD|1562440 - symbol:Mterfd2 "MTERF domain containing 2" ... 99 0.00015 1
UNIPROTKB|Q7Z6M4 - symbol:MTERFD2 "mTERF domain-containin... 95 0.00048 1
>FB|FBgn0037008 [details] [associations]
symbol:mTerf3 species:7227 "Drosophila melanogaster"
[GO:0006264 "mitochondrial DNA replication" evidence=IMP]
[GO:0006390 "transcription from mitochondrial promoter"
evidence=IMP] [GO:0032543 "mitochondrial translation" evidence=IMP]
GO:GO:0005739 EMBL:AE014296 GO:GO:0032543 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 OMA:TRVAYLQ
GeneTree:ENSGT00390000005801 EMBL:AY051744 RefSeq:NP_649240.1
UniGene:Dm.7718 SMR:Q9VPD5 IntAct:Q9VPD5 MINT:MINT-743061
STRING:Q9VPD5 EnsemblMetazoa:FBtr0078215 GeneID:40279
KEGG:dme:Dmel_CG5047 UCSC:CG5047-RA CTD:40279 FlyBase:FBgn0037008
InParanoid:Q9VPD5 OrthoDB:EOG4GHX4W GenomeRNAi:40279 NextBio:817950
Uniprot:Q9VPD5
Length = 354
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 45/94 (47%), Positives = 66/94 (70%)
Query: 14 LSLDATELVKTFNYVHSDMKVPHERILEFPNILTSRRFRIENRHSYLKSLGRDQYDPCKE 73
L + +LV+ F+Y+H DM +PH +I++ P +L SR FR+ RH +LK LGR QYDP K+
Sbjct: 260 LMIPPDDLVERFSYIHQDMGLPHAQIVQCPELLASREFRLRERHEFLKLLGRAQYDPQKD 319
Query: 74 NYVSMKSLVSGTDAEFCANVAKTTPETYNLFLKS 107
Y+S K++V G + F NVAK+ ET++LFLK+
Sbjct: 320 LYISPKTIVEGNNFYFVRNVAKSDLETFDLFLKT 353
>UNIPROTKB|F1RY61 [details] [associations]
symbol:MTERFD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] GO:GO:0005739 GO:GO:0044212 CTD:51001 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 OMA:TRVAYLQ
GeneTree:ENSGT00390000005801 EMBL:CU463146 RefSeq:XP_001929306.1
UniGene:Ssc.10844 Ensembl:ENSSSCT00000006681 GeneID:100152384
KEGG:ssc:100152384 Uniprot:F1RY61
Length = 414
Score = 231 (86.4 bits), Expect = 7.4e-19, P = 7.4e-19
Identities = 42/95 (44%), Positives = 63/95 (66%)
Query: 14 LSLDATELVKTFNYVHSDMKVPHERILEFPNILTSRRFRIENRHSYLKSLGRDQYDPCKE 73
L+ + +L +TF+YVH+ M++PH I+ FP + +R F+I+ RH +L LGR QYDP K
Sbjct: 320 LTANKRKLTETFDYVHNVMRIPHHVIVRFPQVFNTRLFKIKERHLFLAYLGRAQYDPAKP 379
Query: 74 NYVSMKSLVSGTDAEFCANVAKTTPETYNLFLKSL 108
NY+S+ LVS D FC +AK + + + FLK+L
Sbjct: 380 NYISLDKLVSMPDEIFCEEMAKASVQDFEKFLKTL 414
>UNIPROTKB|G3V130 [details] [associations]
symbol:MTERFD1 "mTERF domain-containing protein 1,
mitochondrial" species:9606 "Homo sapiens" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] GO:GO:0005739
EMBL:CH471060 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
EMBL:AP003465 UniGene:Hs.308613 HGNC:HGNC:24258
ProteinModelPortal:G3V130 SMR:G3V130 Ensembl:ENST00000522822
ArrayExpress:G3V130 Bgee:G3V130 Uniprot:G3V130
Length = 296
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 40/95 (42%), Positives = 63/95 (66%)
Query: 14 LSLDATELVKTFNYVHSDMKVPHERILEFPNILTSRRFRIENRHSYLKSLGRDQYDPCKE 73
L+ + +L +TF++VH+ M +PH I++FP + +R F+++ RH +L LGR QYDP K
Sbjct: 202 LTANKMKLTETFDFVHNVMSIPHHIIVKFPQVFNTRLFKVKERHLFLTYLGRAQYDPAKP 261
Query: 74 NYVSMKSLVSGTDAEFCANVAKTTPETYNLFLKSL 108
NY+S+ LVS D FC +AK + + + FLK+L
Sbjct: 262 NYISLDKLVSIPDEIFCEEIAKASVQDFEKFLKTL 296
>UNIPROTKB|Q1LZE3 [details] [associations]
symbol:MTERFD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] GO:GO:0005739 GO:GO:0044212 CTD:51001
eggNOG:NOG246142 HOGENOM:HOG000044443 HOVERGEN:HBG062577 KO:K15032
OrthoDB:EOG4CRM08 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
OMA:TRVAYLQ GeneTree:ENSGT00390000005801 EMBL:DAAA02039445
EMBL:BC116050 IPI:IPI00697939 RefSeq:NP_001069349.1
UniGene:Bt.53018 Ensembl:ENSBTAT00000001994 GeneID:526138
KEGG:bta:526138 InParanoid:Q1LZE3 NextBio:20874312 Uniprot:Q1LZE3
Length = 417
Score = 226 (84.6 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 41/95 (43%), Positives = 63/95 (66%)
Query: 14 LSLDATELVKTFNYVHSDMKVPHERILEFPNILTSRRFRIENRHSYLKSLGRDQYDPCKE 73
L+ + +L +TF+YVH+ M+VPH I+ FP + +R F+++ RH +L LGR QYDP +
Sbjct: 323 LTANKRKLTETFDYVHNVMRVPHHVIVRFPQVFNTRLFKVKERHLFLAYLGRAQYDPTEP 382
Query: 74 NYVSMKSLVSGTDAEFCANVAKTTPETYNLFLKSL 108
NY+S+ LVS D FC +AK + + + FLK+L
Sbjct: 383 NYISLDKLVSVPDGIFCEGMAKASIQDFEKFLKTL 417
>UNIPROTKB|E2RL82 [details] [associations]
symbol:MTERFD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] GO:GO:0005739
GO:GO:0044212 CTD:51001 KO:K15032 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 OMA:TRVAYLQ GeneTree:ENSGT00390000005801
EMBL:AAEX03015990 RefSeq:XP_003433727.1 Ensembl:ENSCAFT00000015040
GeneID:100684270 KEGG:cfa:100684270 Uniprot:E2RL82
Length = 417
Score = 226 (84.6 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 40/95 (42%), Positives = 61/95 (64%)
Query: 14 LSLDATELVKTFNYVHSDMKVPHERILEFPNILTSRRFRIENRHSYLKSLGRDQYDPCKE 73
L+ + +L +TF+YVH+ M +PH I+ FP + +R F+++ RH +L LGR QYDP K
Sbjct: 323 LTANKRKLTETFDYVHNVMNIPHHLIVRFPQVFNTRLFKVKERHLFLTYLGRAQYDPTKP 382
Query: 74 NYVSMKSLVSGTDAEFCANVAKTTPETYNLFLKSL 108
NY+S+ VS D FC +AK + + + FLK+L
Sbjct: 383 NYISLDKFVSVPDEIFCEEIAKASVQDFEKFLKTL 417
>UNIPROTKB|Q96E29 [details] [associations]
symbol:MTERFD1 "mTERF domain-containing protein 1,
mitochondrial" species:9606 "Homo sapiens" [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
GO:GO:0005739 GO:GO:0045892 GO:GO:0006351 GO:GO:0044212 CTD:51001
eggNOG:NOG246142 HOGENOM:HOG000044443 HOVERGEN:HBG062577 KO:K15032
OrthoDB:EOG4CRM08 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
EMBL:AF132946 EMBL:AP003465 EMBL:BC012995 IPI:IPI00101163
IPI:IPI00798150 RefSeq:NP_057026.3 UniGene:Hs.308613 PDB:3M66
PDB:3OPG PDBsum:3M66 PDBsum:3OPG ProteinModelPortal:Q96E29
SMR:Q96E29 STRING:Q96E29 DMDM:74731522 PaxDb:Q96E29 PRIDE:Q96E29
DNASU:51001 Ensembl:ENST00000287025 GeneID:51001 KEGG:hsa:51001
UCSC:uc003yhr.1 GeneCards:GC08M097321 HGNC:HGNC:24258 HPA:HPA002966
neXtProt:NX_Q96E29 PharmGKB:PA142671309 InParanoid:Q96E29
OMA:TRVAYLQ PhylomeDB:Q96E29 EvolutionaryTrace:Q96E29
GenomeRNAi:51001 NextBio:53456 ArrayExpress:Q96E29 Bgee:Q96E29
CleanEx:HS_MTERFD1 Genevestigator:Q96E29 GermOnline:ENSG00000156469
Uniprot:Q96E29
Length = 417
Score = 226 (84.6 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 40/95 (42%), Positives = 63/95 (66%)
Query: 14 LSLDATELVKTFNYVHSDMKVPHERILEFPNILTSRRFRIENRHSYLKSLGRDQYDPCKE 73
L+ + +L +TF++VH+ M +PH I++FP + +R F+++ RH +L LGR QYDP K
Sbjct: 323 LTANKMKLTETFDFVHNVMSIPHHIIVKFPQVFNTRLFKVKERHLFLTYLGRAQYDPAKP 382
Query: 74 NYVSMKSLVSGTDAEFCANVAKTTPETYNLFLKSL 108
NY+S+ LVS D FC +AK + + + FLK+L
Sbjct: 383 NYISLDKLVSIPDEIFCEEIAKASVQDFEKFLKTL 417
>RGD|735158 [details] [associations]
symbol:Mterfd1 "MTERF domain containing 1" species:10116 "Rattus
norvegicus" [GO:0005739 "mitochondrion" evidence=ISO;ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=ISO;ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;ISS] RGD:735158
GO:GO:0005739 GO:GO:0045892 GO:GO:0006351 GO:GO:0044212 CTD:51001
eggNOG:NOG246142 HOGENOM:HOG000044443 HOVERGEN:HBG062577 KO:K15032
OrthoDB:EOG4CRM08 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
EMBL:BC062080 IPI:IPI00400733 RefSeq:NP_955419.1 UniGene:Rn.103375
STRING:Q6P6Q6 PRIDE:Q6P6Q6 GeneID:299514 KEGG:rno:299514
UCSC:RGD:735158 InParanoid:Q6P6Q6 NextBio:645359
ArrayExpress:Q6P6Q6 Genevestigator:Q6P6Q6
GermOnline:ENSRNOG00000004492 Uniprot:Q6P6Q6
Length = 409
Score = 224 (83.9 bits), Expect = 4.3e-18, P = 4.3e-18
Identities = 41/95 (43%), Positives = 61/95 (64%)
Query: 14 LSLDATELVKTFNYVHSDMKVPHERILEFPNILTSRRFRIENRHSYLKSLGRDQYDPCKE 73
L+ + +L +TF+YVH+ M +PH I++FP + +R F+I+ RH +L LG+ QYDP K
Sbjct: 315 LTANKRKLTETFDYVHNVMNIPHHIIVKFPQVFNTRVFKIKERHLFLAYLGKAQYDPAKP 374
Query: 74 NYVSMKSLVSGTDAEFCANVAKTTPETYNLFLKSL 108
NYVS+ VS D FC +AK + + FLK+L
Sbjct: 375 NYVSLDKFVSFPDEVFCKEIAKASVNDFEKFLKTL 409
>MGI|MGI:1913660 [details] [associations]
symbol:Mterfd1 "MTERF domain containing 1" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IMP] MGI:MGI:1913660 GO:GO:0005739 GO:GO:0045892
GO:GO:0006351 GO:GO:0044212 CTD:51001 eggNOG:NOG246142
HOGENOM:HOG000044443 HOVERGEN:HBG062577 KO:K15032 OrthoDB:EOG4CRM08
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 OMA:TRVAYLQ
EMBL:AK010525 EMBL:AK011934 EMBL:BC025173 EMBL:BC085282
IPI:IPI00109282 RefSeq:NP_079823.2 UniGene:Mm.347939
ProteinModelPortal:Q8R3J4 SMR:Q8R3J4 STRING:Q8R3J4 PRIDE:Q8R3J4
DNASU:66410 Ensembl:ENSMUST00000021991 GeneID:66410 KEGG:mmu:66410
UCSC:uc007qzw.2 GeneTree:ENSGT00390000005801 InParanoid:Q8R3J4
NextBio:321609 Bgee:Q8R3J4 CleanEx:MM_MTERFD1 Genevestigator:Q8R3J4
GermOnline:ENSMUSG00000021519 Uniprot:Q8R3J4
Length = 412
Score = 218 (81.8 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 41/95 (43%), Positives = 60/95 (63%)
Query: 14 LSLDATELVKTFNYVHSDMKVPHERILEFPNILTSRRFRIENRHSYLKSLGRDQYDPCKE 73
L+ + +L + F+YVH+ M +PH I++FP + +R F+I+ RH +L LGR QYDP K
Sbjct: 318 LTANKRKLTEIFDYVHNVMNIPHHIIVKFPQLFNTRVFKIKERHLFLAYLGRAQYDPAKP 377
Query: 74 NYVSMKSLVSGTDAEFCANVAKTTPETYNLFLKSL 108
NYVS+ VS D FC +AK + + FLK+L
Sbjct: 378 NYVSLDKFVSFPDKIFCKEIAKASLNDFEKFLKTL 412
>UNIPROTKB|F1P3M7 [details] [associations]
symbol:MTERFD1 "mTERF domain-containing protein 1,
mitochondrial" species:9031 "Gallus gallus" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] GO:GO:0005739
GO:GO:0044212 IPI:IPI00591676 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 OMA:TRVAYLQ GeneTree:ENSGT00390000005801
EMBL:AADN02024909 PRIDE:F1P3M7 Ensembl:ENSGALT00000025772
Uniprot:F1P3M7
Length = 405
Score = 208 (78.3 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 38/95 (40%), Positives = 58/95 (61%)
Query: 14 LSLDATELVKTFNYVHSDMKVPHERILEFPNILTSRRFRIENRHSYLKSLGRDQYDPCKE 73
L+ L +TF+Y+H+ M +PH + FP + S+ RI+ RH +L LGR QYDP K
Sbjct: 311 LTASKKRLRQTFDYLHNIMGIPHNMLTRFPQVFNSKLLRIKERHMFLIFLGRAQYDPTKP 370
Query: 74 NYVSMKSLVSGTDAEFCANVAKTTPETYNLFLKSL 108
+Y+S+ LVS D FC +AK + + + FLK++
Sbjct: 371 SYISLDQLVSLPDEVFCTEIAKASMQDFEKFLKTI 405
>UNIPROTKB|Q5ZJC8 [details] [associations]
symbol:MTERFD1 "mTERF domain-containing protein 1,
mitochondrial" species:9031 "Gallus gallus" [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISS]
GO:GO:0005739 GO:GO:0045892 GO:GO:0006351 GO:GO:0044212
EMBL:AJ720506 IPI:IPI00591676 RefSeq:NP_001006348.1
UniGene:Gga.6457 PRIDE:Q5ZJC8 GeneID:420237 KEGG:gga:420237
CTD:51001 eggNOG:NOG246142 HOGENOM:HOG000044443 HOVERGEN:HBG062577
InParanoid:Q5ZJC8 KO:K15032 OrthoDB:EOG4CRM08 NextBio:20823185
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 Uniprot:Q5ZJC8
Length = 405
Score = 208 (78.3 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 38/95 (40%), Positives = 58/95 (61%)
Query: 14 LSLDATELVKTFNYVHSDMKVPHERILEFPNILTSRRFRIENRHSYLKSLGRDQYDPCKE 73
L+ L +TF+Y+H+ M +PH + FP + S+ RI+ RH +L LGR QYDP K
Sbjct: 311 LTASKKRLRQTFDYLHNIMGIPHNMLTRFPQVFNSKLLRIKERHMFLIFLGRAQYDPTKP 370
Query: 74 NYVSMKSLVSGTDAEFCANVAKTTPETYNLFLKSL 108
+Y+S+ LVS D FC +AK + + + FLK++
Sbjct: 371 SYISLDQLVSLPDEVFCTEIAKASMQDFEKFLKTI 405
>ZFIN|ZDB-GENE-040718-359 [details] [associations]
symbol:mterfd1 "MTERF domain containing 1"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] ZFIN:ZDB-GENE-040718-359 CTD:51001 HOVERGEN:HBG062577
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
EMBL:BC075975 IPI:IPI00510144 RefSeq:NP_001002615.1
UniGene:Dr.161828 GeneID:436888 KEGG:dre:436888 InParanoid:Q6DHJ7
NextBio:20831315 Uniprot:Q6DHJ7
Length = 402
Score = 194 (73.4 bits), Expect = 8.5e-15, P = 8.5e-15
Identities = 37/89 (41%), Positives = 55/89 (61%)
Query: 20 ELVKTFNYVHSDMKVPHERILEFPNILTSRRFRIENRHSYLKSLGRDQYDPCKENYVSMK 79
+L + F++VH+ M +PH I +FP +L ++ RI RH +L+ LGR QY P + NY+S+
Sbjct: 314 KLTQIFDFVHNTMNIPHSLIAKFPQVLNAKFLRIRERHLFLEYLGRAQYQPDQPNYISLS 373
Query: 80 SLVSGTDAEFCANVAKTTPETYNLFLKSL 108
LV D FC+ VA T E + F K+L
Sbjct: 374 RLVFLPDDVFCSEVALATLEDFERFQKTL 402
>MGI|MGI:1918355 [details] [associations]
symbol:Mterfd2 "MTERF domain containing 2" species:10090
"Mus musculus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005762 "mitochondrial large
ribosomal subunit" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0006390 "transcription from mitochondrial
promoter" evidence=IMP] [GO:0006626 "protein targeting to
mitochondrion" evidence=IMP] [GO:0007507 "heart development"
evidence=IMP] [GO:0019843 "rRNA binding" evidence=ISO] [GO:0042255
"ribosome assembly" evidence=IMP] [GO:0043010 "camera-type eye
development" evidence=IMP] MGI:MGI:1918355 GO:GO:0006626
GO:GO:0007507 GO:GO:0043010 GO:GO:0005762 GO:GO:0019843
GO:GO:0042255 KO:K15032 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 CTD:130916 eggNOG:NOG44738 HOGENOM:HOG000069984
HOVERGEN:HBG081990 OMA:TEILHRC OrthoDB:EOG4MKNGP GO:GO:0006390
EMBL:AK077142 EMBL:BC002280 EMBL:BC055877 EMBL:BC064709
IPI:IPI00225936 RefSeq:NP_835152.1 UniGene:Mm.52809
ProteinModelPortal:Q8BVN4 SMR:Q8BVN4 PhosphoSite:Q8BVN4
PaxDb:Q8BVN4 PRIDE:Q8BVN4 Ensembl:ENSMUST00000027492 GeneID:69821
KEGG:mmu:69821 UCSC:uc007cdo.1 GeneTree:ENSGT00460000041648
InParanoid:Q8BVN4 NextBio:330419 Bgee:Q8BVN4 CleanEx:MM_MTERFD2
Genevestigator:Q8BVN4 GermOnline:ENSMUSG00000026273 Uniprot:Q8BVN4
Length = 346
Score = 100 (40.3 bits), Expect = 0.00012, P = 0.00012
Identities = 32/100 (32%), Positives = 50/100 (50%)
Query: 14 LSLDATELVKTFNYVHSDMKVPHERILEFPNILTSRRFRIENRHSYLKSLGRDQYDPCKE 73
L D EL F Y + M + H I+ N L +I+ RH YL+ LGR Q P K+
Sbjct: 223 LQEDPNELEYKFQYAYFRMGLTHLDIVR-TNFLQYSITKIKQRHIYLERLGRYQ-TPDKK 280
Query: 74 NYV-----SMKSLVSGTDAEFCANVAKTTPETYNLFLKSL 108
S+++++ ++AEF A A ++ E + +F K L
Sbjct: 281 GQTQIPNPSLRNILRVSEAEFLARTACSSVEEFQVFKKLL 320
>UNIPROTKB|B4DFP7 [details] [associations]
symbol:MTERFD2 "cDNA FLJ59868, highly similar to Homo
sapiens MTERF domain containing 2 (MTERFD2), mRNA" species:9606
"Homo sapiens" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006390 "transcription from mitochondrial promoter"
evidence=IEA] [GO:0006626 "protein targeting to mitochondrion"
evidence=IEA] [GO:0007507 "heart development" evidence=IEA]
[GO:0042255 "ribosome assembly" evidence=IEA] [GO:0043010
"camera-type eye development" evidence=IEA] GO:GO:0005739
GO:GO:0006626 GO:GO:0007507 GO:GO:0043010 EMBL:AC005237
GO:GO:0042255 InterPro:IPR003690 SMART:SM00733 UniGene:Hs.159556
HGNC:HGNC:28785 ChiTaRS:MTERFD2 GO:GO:0006390 EMBL:AK294192
IPI:IPI00894053 SMR:B4DFP7 Ensembl:ENST00000406593 Uniprot:B4DFP7
Length = 193
Score = 95 (38.5 bits), Expect = 0.00012, P = 0.00012
Identities = 30/97 (30%), Positives = 48/97 (49%)
Query: 17 DATELVKTFNYVHSDMKVPHERILEFPNILTSRRFRIENRHSYLKSLGRDQYDPCKENYV 76
D +L F Y + M + H I++ + S +I+ RH YL+ LGR Q P K+
Sbjct: 38 DLGQLEYKFQYAYFRMGIKHPDIVKSEYLQYSLT-KIKQRHIYLERLGRYQ-TPDKKGQT 95
Query: 77 S-----MKSLVSGTDAEFCANVAKTTPETYNLFLKSL 108
+K ++ ++AEF A A T+ E + +F K L
Sbjct: 96 QIPNPLLKDILRVSEAEFLARTACTSVEEFQVFKKLL 132
>RGD|1562440 [details] [associations]
symbol:Mterfd2 "MTERF domain containing 2" species:10116 "Rattus
norvegicus" [GO:0005739 "mitochondrion" evidence=ISO] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=IEA;ISO]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0006390
"transcription from mitochondrial promoter" evidence=IEA;ISO]
[GO:0006626 "protein targeting to mitochondrion" evidence=IEA;ISO]
[GO:0007507 "heart development" evidence=IEA;ISO] [GO:0019843 "rRNA
binding" evidence=IEA;ISO] [GO:0042255 "ribosome assembly"
evidence=IEA;ISO] [GO:0043010 "camera-type eye development"
evidence=IEA;ISO] RGD:1562440 GO:GO:0006626 GO:GO:0007507
GO:GO:0043010 GO:GO:0005762 GO:GO:0019843 GO:GO:0042255 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 CTD:130916
eggNOG:NOG44738 HOGENOM:HOG000069984 HOVERGEN:HBG081990 OMA:TEILHRC
OrthoDB:EOG4MKNGP GO:GO:0006390 GeneTree:ENSGT00460000041648
EMBL:BC098676 IPI:IPI00367144 RefSeq:NP_001032286.1
UniGene:Rn.41249 PRIDE:Q4G078 Ensembl:ENSRNOT00000056558
GeneID:363289 KEGG:rno:363289 UCSC:RGD:1562440 InParanoid:Q4G078
NextBio:683147 Genevestigator:Q4G078 GermOnline:ENSRNOG00000037376
Uniprot:Q4G078
Length = 347
Score = 99 (39.9 bits), Expect = 0.00015, P = 0.00015
Identities = 31/100 (31%), Positives = 51/100 (51%)
Query: 14 LSLDATELVKTFNYVHSDMKVPHERILEFPNILTSRRFRIENRHSYLKSLGRDQYDPCKE 73
L D +EL F Y + M + H I+ + L +++ RH YL+ LGR Q P K+
Sbjct: 223 LQEDPSELEYKFQYAYFRMGLTHLDIVR-TDFLQYSIAKVKQRHIYLERLGRYQ-TPDKK 280
Query: 74 NYV-----SMKSLVSGTDAEFCANVAKTTPETYNLFLKSL 108
S+K+++ ++AEF A A ++ E + +F K L
Sbjct: 281 GQTQIPNPSLKNILRVSEAEFLARTACSSAEEFEVFKKLL 320
>UNIPROTKB|Q7Z6M4 [details] [associations]
symbol:MTERFD2 "mTERF domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0006390 "transcription from mitochondrial
promoter" evidence=IEA] [GO:0006626 "protein targeting to
mitochondrion" evidence=IEA] [GO:0007507 "heart development"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IEA]
[GO:0043010 "camera-type eye development" evidence=IEA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=IDA] [GO:0019843
"rRNA binding" evidence=IDA] GO:GO:0006626 GO:GO:0007507
GO:GO:0043010 GO:GO:0005762 GO:GO:0019843 EMBL:AC005237
GO:GO:0042255 KO:K15032 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 EMBL:BC053533 EMBL:AF161359 IPI:IPI00376346
RefSeq:NP_872307.2 UniGene:Hs.159556 PDB:4FP9 PDB:4FZV PDBsum:4FP9
PDBsum:4FZV ProteinModelPortal:Q7Z6M4 SMR:Q7Z6M4 DIP:DIP-49918N
IntAct:Q7Z6M4 MINT:MINT-2878691 PhosphoSite:Q7Z6M4 DMDM:296439296
PaxDb:Q7Z6M4 PRIDE:Q7Z6M4 Ensembl:ENST00000241527
Ensembl:ENST00000391980 GeneID:130916 KEGG:hsa:130916
UCSC:uc002wan.1 CTD:130916 GeneCards:GC02M242014 H-InvDB:HIX0002987
HGNC:HGNC:28785 HPA:HPA027097 neXtProt:NX_Q7Z6M4
PharmGKB:PA142671310 eggNOG:NOG44738 HOGENOM:HOG000069984
HOVERGEN:HBG081990 InParanoid:Q7Z6M4 OMA:TEILHRC OrthoDB:EOG4MKNGP
PhylomeDB:Q7Z6M4 ChiTaRS:MTERFD2 GenomeRNAi:130916 NextBio:82844
ArrayExpress:Q7Z6M4 Bgee:Q7Z6M4 CleanEx:HS_MTERFD2
Genevestigator:Q7Z6M4 GermOnline:ENSG00000122085 GO:GO:0006390
Uniprot:Q7Z6M4
Length = 381
Score = 95 (38.5 bits), Expect = 0.00048, P = 0.00048
Identities = 30/97 (30%), Positives = 48/97 (49%)
Query: 17 DATELVKTFNYVHSDMKVPHERILEFPNILTSRRFRIENRHSYLKSLGRDQYDPCKENYV 76
D +L F Y + M + H I++ + S +I+ RH YL+ LGR Q P K+
Sbjct: 226 DLGQLEYKFQYAYFRMGIKHPDIVKSEYLQYSLT-KIKQRHIYLERLGRYQ-TPDKKGQT 283
Query: 77 S-----MKSLVSGTDAEFCANVAKTTPETYNLFLKSL 108
+K ++ ++AEF A A T+ E + +F K L
Sbjct: 284 QIPNPLLKDILRVSEAEFLARTACTSVEEFQVFKKLL 320
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.131 0.372 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 108 108 0.00091 102 3 11 22 0.41 30
29 0.40 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 531 (57 KB)
Total size of DFA: 109 KB (2074 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 11.54u 0.15s 11.69t Elapsed: 00:00:01
Total cpu time: 11.54u 0.15s 11.69t Elapsed: 00:00:01
Start: Thu Aug 15 11:55:43 2013 End: Thu Aug 15 11:55:44 2013