RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14473
(94 letters)
>d1hnga1 b.1.1.1 (A:2-99) CD2, first domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 98
Score = 37.8 bits (87), Expect = 2e-05
Identities = 11/64 (17%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Query: 10 YSYHQSFYTEGRTLPINRKQKVFPNGTLIIENVERQSDQATYTCVAKTAQGYS-SRGTLE 68
+ F + + + ++ NG L I+N+ + D TY + G L+
Sbjct: 35 STLVAEFKRKMKPFLKSGAFEILANGDLKIKNL-TRDDSGTYNVTVYSTNGTRILNKALD 93
Query: 69 VQVM 72
++++
Sbjct: 94 LRIL 97
>d1l6za1 b.1.1.1 (A:1-107) Biliary glycoprotein C (CD66a,
CEACAM1A[1,4]), N-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 107
Score = 36.2 bits (83), Expect = 7e-05
Identities = 9/71 (12%), Positives = 24/71 (33%), Gaps = 1/71 (1%)
Query: 1 MPPLLLFLIYSYHQSFYTEGRTLPINRKQKVFPNGTLIIENVERQSDQATYTCVAKTAQG 60
+ I + + + ++ ++ NG+L+ + + D YT
Sbjct: 37 NTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMI-TMKDMGVYTLDMTDENY 95
Query: 61 YSSRGTLEVQV 71
++ T+ V
Sbjct: 96 RRTQATVRFHV 106
>d1f97a1 b.1.1.1 (A:27-128) Junction adhesion molecule, JAM,
N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 102
Score = 34.7 bits (78), Expect = 3e-04
Identities = 10/64 (15%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Query: 10 YSYHQSFYTEGRTLPINRKQKVFPNGTLIIENVERQSDQATYTCVAKTAQGY-SSRGTLE 68
S + + F + + +V R D YTC+ G ++
Sbjct: 40 GSTTALVCYNSQITAPYADRVTFSSSGITFSSVTR-KDNGEYTCMVSEEGGQNYGEVSIH 98
Query: 69 VQVM 72
+ V+
Sbjct: 99 LTVL 102
>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein
phosphatase mu {Human (Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 33.8 bits (76), Expect = 5e-04
Identities = 9/71 (12%), Positives = 21/71 (29%), Gaps = 6/71 (8%)
Query: 2 PPLLLFLIYSYHQSFYTEGRTLPINRKQKVFPNGTLIIENVERQSDQATYTCVAKTAQG- 60
+ + ++ + + + N + D Y C+ +T G
Sbjct: 30 VAGDRLWLQGIDVRDAPLKEIKVTSSRRFIA---SFNVVNTTK-RDAGKYRCMIRTEGGV 85
Query: 61 -YSSRGTLEVQ 70
S+ L V+
Sbjct: 86 GISNYAELVVK 96
>d2avga1 b.1.1.4 (A:1-110) Cardiac myosin binding protein C,
different domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 110
Score = 33.1 bits (74), Expect = 0.001
Identities = 8/38 (21%), Positives = 12/38 (31%), Gaps = 2/38 (5%)
Query: 34 NGTLIIENVERQSDQATYTCVAKTAQGY-SSRGTLEVQ 70
L I + + + Y C T + S L V
Sbjct: 71 LFELHITDAQP-AFTGGYRCEVSTKDKFDCSNFNLTVH 107
>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 89
Score = 32.4 bits (73), Expect = 0.002
Identities = 12/48 (25%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Query: 24 PINRKQKVFPNGTLIIENVERQSDQATYTCVAKTAQGYSSRGTLEVQV 71
P++ + + L+I+ V+ D+ Y C A G VQV
Sbjct: 43 PLSGGRATVTDSGLVIKGVKN-GDKGYYGCRATNEHG-DKYFETLVQV 88
>d2crya1 b.1.1.1 (A:8-122) Kin of IRRE-like protein 3, KIRREL3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 115
Score = 32.8 bits (73), Expect = 0.002
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Query: 36 TLIIENVERQSDQATYTCVAKTAQGYSSRGTLEVQVMGINE-KPFSG 81
TL I N+ R Q Y C A + G S + ++ G P SG
Sbjct: 70 TLTISNIVRADFQTIYNCTAWNSFG-SDTEIIRLKEQGSEMSGPSSG 115
>d1fhga_ b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo) [TaxId:
9103]}
Length = 102
Score = 32.2 bits (72), Expect = 0.002
Identities = 10/30 (33%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 44 RQSDQATYTCVAKTAQGY-SSRGTLEVQVM 72
D A YTC A + G + L V+ M
Sbjct: 73 CGDDDAKYTCKAVNSLGEATCTAELLVETM 102
>d1rhfa1 b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor tyro3,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 31.9 bits (71), Expect = 0.003
Identities = 13/64 (20%), Positives = 20/64 (31%), Gaps = 3/64 (4%)
Query: 9 IYSYHQSFYTEGRTLPINRKQKVFPNGTLIIENVERQSDQATYTCVAKTAQG--YSSRGT 66
I + + G L +++VER SD Y C + S
Sbjct: 28 IQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVER-SDAGRYWCQVEDGGETEISQPVW 86
Query: 67 LEVQ 70
L V+
Sbjct: 87 LTVE 90
>d1gl4b_ b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 89
Score = 31.5 bits (70), Expect = 0.004
Identities = 15/48 (31%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Query: 24 PINRKQKVFPNGTLIIENVERQSDQATYTCVAKTAQGY-SSRGTLEVQ 70
+ + NG L I NV+ SD TY C TL VQ
Sbjct: 43 GKLPSRAMDFNGILTIRNVQP-SDAGTYVCTGSNMFAMDQGTATLHVQ 89
>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId:
9606]}
Length = 101
Score = 31.4 bits (70), Expect = 0.004
Identities = 8/47 (17%), Positives = 16/47 (34%), Gaps = 2/47 (4%)
Query: 32 FPNGTLIIENVERQSDQATYTCVAKTAQGYSSRGTLEVQVMGINEKP 78
L I + YT + + G S + + + V+ + P
Sbjct: 53 ENGSKLTILAARQ-EHCGCYTLLVENKLG-SRQAQVNLTVVDKPDPP 97
>d1biha1 b.1.1.4 (A:5-98) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 94
Score = 31.6 bits (70), Expect = 0.005
Identities = 11/62 (17%), Positives = 21/62 (33%), Gaps = 1/62 (1%)
Query: 10 YSYHQSFYTEGRTLPINRKQKVFPNGTLIIENVERQSDQATYTCVAKTAQGYSSRGTLEV 69
Y + + G+L+ + SD+ Y C A+T G +S +
Sbjct: 33 VKYSWKKDGKSYNWQEHNAALRKDEGSLVFLRP-QASDEGHYQCFAETPAGVASSRVISF 91
Query: 70 QV 71
+
Sbjct: 92 RK 93
>d1n26a1 b.1.1.4 (A:1-93) Interleukin-6 receptor alpha chain,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 31.4 bits (70), Expect = 0.005
Identities = 6/54 (11%), Positives = 17/54 (31%), Gaps = 1/54 (1%)
Query: 16 FYTEGRTLPINRKQKVFPNGTLIIENVERQSDQATYTCVAKTAQGYSSRGTLEV 69
+ + + L++ +V+ D Y+C + ++V
Sbjct: 41 WVLRKPAAGSHPSRWAGMGRRLLLRSVQL-HDSGNYSCYRAGRPAGTVHLLVDV 93
>d1x44a1 b.1.1.4 (A:8-97) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 30.9 bits (69), Expect = 0.007
Identities = 11/62 (17%), Positives = 17/62 (27%), Gaps = 4/62 (6%)
Query: 9 IYSYHQSFYTEGRTLPINRKQKVFPNGTLIIENVERQSDQATYTCVAKTAQGYSSRGTLE 68
+ + R + LIIE + D A Y+ + S L
Sbjct: 31 VKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKA-DAAEYSVMTTGG---QSSAKLS 86
Query: 69 VQ 70
V
Sbjct: 87 VD 88
>d1pkoa_ b.1.1.1 (A:) Myelin oligodendrocyte glycoprotein (MOG) {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 126
Score = 31.2 bits (69), Expect = 0.009
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 34 NGTLIIENVERQSDQATYTCVAKTAQGYSSRGTLEVQV 71
L I+NV R SD+ YTC + +E++V
Sbjct: 80 KVALRIQNV-RFSDEGGYTCFFRDHSYQEEA-AVELKV 115
>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 91
Score = 30.6 bits (68), Expect = 0.009
Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 34 NGTLIIENVERQSDQATYTCVAKTAQGY-SSRGTLEVQ 70
L I+NV+ D+ TY C A+ +G + +G + +
Sbjct: 54 EPLLHIQNVDF-EDEGTYECEAENIKGRDTYQGRIIIH 90
>d1gxea_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 30.8 bits (68), Expect = 0.013
Identities = 10/39 (25%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 34 NGTLIIENVERQSDQATYTCVAKTAQGYSSRGTLEVQVM 72
+E E+ D+ YT K G + L V+V+
Sbjct: 93 RSIFTVEGAEK-EDEGVYTVTVKNPVG-EDQVNLTVKVI 129
>d1iray2 b.1.1.4 (Y:102-204) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 30.2 bits (67), Expect = 0.013
Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 5/67 (7%)
Query: 15 SFYTEGRTLPINRKQKVFPNGTLIIENVERQSDQATYTCVAKTAQG---YSSRGTLEVQV 71
+Y + + L ++ LI+ NV + YTC A Y +E
Sbjct: 38 QWYKDCKPLLLDNIHFSGVKDRLIVMNVAE-KHRGNYTCHASYTYLGKQYPITRVIEFIT 96
Query: 72 MGINEKP 78
+ KP
Sbjct: 97 LE-ENKP 102
>d2dava1 b.1.1.4 (A:8-120) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 30.4 bits (67), Expect = 0.015
Identities = 7/38 (18%), Positives = 11/38 (28%), Gaps = 2/38 (5%)
Query: 34 NGTLIIENVERQSDQATYTCVAKTAQGY-SSRGTLEVQ 70
+ I + + Y C + S LEV
Sbjct: 67 TFEMQIIKAKD-NFAGNYRCEVTYKDKFDSCSFDLEVH 103
>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM,
C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 110
Score = 30.0 bits (66), Expect = 0.018
Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 34 NGTLIIENVERQSDQATYTCVAKTAQGYSSR-GTLEVQVMGIN 75
+G LI + V D Y C A+ G + R + + +N
Sbjct: 66 SGDLIFDPVTA-FDSGEYYCQAQNGYGTAMRSEAAHMDAVELN 107
>d1nbqa2 b.1.1.4 (A:130-233) Junction adhesion molecule, JAM,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 29.6 bits (65), Expect = 0.022
Identities = 8/52 (15%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
Query: 21 RTLPINRKQKVFPNGTLIIENVERQSDQATYTCVAKTAQGYSSR-GTLEVQV 71
R + G L+ + + D Y+C A+ G + ++
Sbjct: 52 RAFSNSSYVLNPTTGELVFDPLSAS-DTGEYSCEARNGYGTPMTSNAVRMEA 102
>d3dara1 b.1.1.4 (A:153-249) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR2a [TaxId: 9606]}
Length = 97
Score = 29.4 bits (65), Expect = 0.025
Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 34 NGTLIIENVERQSDQATYTCVAKTAQGYSSRGTLEVQVM 72
+I SD+ YTCV + G S T + V+
Sbjct: 60 QHWSLIMESVVPSDKGNYTCVVENEYG-SINHTYHLDVV 97
>d1eaja_ b.1.1.1 (A:) Coxsackie virus and adenovirus receptor (Car),
domain 1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 124
Score = 29.6 bits (65), Expect = 0.026
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 34 NGTLIIENVERQSDQATYTCVAKTAQGYSSRGT-LEVQV 71
+ ++ + N+ + SD TY C K A G +++ L V V
Sbjct: 87 DASINVTNL-QLSDIGTYQCKVKKAPGVANKKIHLVVLV 124
>d1tnna_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 91
Score = 29.1 bits (64), Expect = 0.033
Identities = 8/28 (28%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 44 RQSDQATYTCVAKTAQGY-SSRGTLEVQ 70
+ SD+ Y+ V + ++G + TL +Q
Sbjct: 63 QASDEGNYSVVVENSEGKQEAEFTLTIQ 90
>d3b5ha1 b.1.1.4 (A:103-203) Cervical EMMPRIN {Human (Homo sapiens)
[TaxId: 9606]}
Length = 101
Score = 28.9 bits (63), Expect = 0.048
Identities = 10/36 (27%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 36 TLIIENVERQSDQATYTCVAKTAQGYSSRGTLEVQV 71
L IEN+ ++D Y C +++G S + + ++V
Sbjct: 66 ELHIENLNMEADPGQYRCNGTSSKG-SDQAIITLRV 100
>d1epfa2 b.1.1.4 (A:98-189) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 92
Score = 28.7 bits (63), Expect = 0.048
Identities = 9/35 (25%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 38 IIENVERQSDQATYTCVAK-TAQGYSSRGTLEVQV 71
I +++ +D+ TY C + A+G + ++V V
Sbjct: 59 QIRGIKK-TDEGTYRCEGRILARGEINFKDIQVIV 92
>d1dr9a1 b.1.1.1 (A:1-105) CD80, N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 105
Score = 28.7 bits (63), Expect = 0.051
Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 34 NGTLIIENVERQSDQATYTCVAKTAQGYSSR 64
N +++I + R SD+ TY CV + + +
Sbjct: 64 NLSIVILAL-RPSDEGTYECVVLKYEKDAFK 93
>d1olza1 b.1.1.4 (A:537-628) Semaphorin 4d Ig-like domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 28.5 bits (62), Expect = 0.064
Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 7/47 (14%)
Query: 32 FPNGTLIIENVERQSDQATYTCVAKTAQGYS------SRGTLEVQVM 72
L+I N+ D Y C+++ ++ LEV+V+
Sbjct: 47 MGRKNLLIFNLSE-GDSGVYQCLSEERVKNKTVFQVVAKHVLEVKVV 92
>d1qz1a3 b.1.1.4 (A:190-289) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 100
Score = 28.3 bits (62), Expect = 0.070
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 34 NGTLIIENVERQSDQATYTCVAKTAQGY-SSRGTLEVQV 71
+ L I NV++ +D+A Y C+A+ G + L+V
Sbjct: 62 SSELTIRNVDK-NDEAEYVCIAENKAGEQDASIHLKVFA 99
>d1koaa1 b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorhabditis
elegans) [TaxId: 6239]}
Length = 97
Score = 27.9 bits (61), Expect = 0.093
Identities = 11/39 (28%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Query: 34 NGTLIIENVERQSDQATYTCVAKTAQGY-SSRGTLEVQV 71
+ L I V + D+ YT AK + G L V
Sbjct: 56 DYGLTINRV-KGDDKGEYTVRAKNSYGTKEEIVFLNVTR 93
>d2fdbp2 b.1.1.4 (P:2252-2360) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR1 [TaxId: 9606]}
Length = 109
Score = 27.6 bits (60), Expect = 0.11
Identities = 12/37 (32%), Positives = 14/37 (37%), Gaps = 2/37 (5%)
Query: 34 NGTLIIENVERQSDQATYTCVAKTAQGY-SSRGTLEV 69
L I NV D YTC+A + G L V
Sbjct: 73 IEVLYIRNVTF-EDAGEYTCLAGNSIGISFHSAWLTV 108
>d1epfa1 b.1.1.4 (A:1-97) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 97
Score = 27.7 bits (60), Expect = 0.11
Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 4/71 (5%)
Query: 1 MPPLLLFLIYSYHQSFYTEGRTLPINRKQKVFPNGTLIIENVERQSDQATYTCVAKTAQG 60
+ + + + + R I+ + TL I N D Y CV G
Sbjct: 29 KDKDISWFSPNGEKLSPNQQR---ISVVWNDDDSSTLTIYNANI-DDAGIYKCVVTAEDG 84
Query: 61 YSSRGTLEVQV 71
S T+ V++
Sbjct: 85 TQSEATVNVKI 95
>d2nxyb1 b.1.1.1 (B:1001-1097) CD4 V-set domains {Human (Homo
sapiens) [TaxId: 9606]}
Length = 97
Score = 27.4 bits (60), Expect = 0.13
Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 6/38 (15%)
Query: 34 NGTLIIENVERQSDQATYTCVAKTAQGYSSRGTLEVQV 71
N LII+N++ D TY C + + +++ V
Sbjct: 66 NFPLIIKNLK-IEDSDTYIC-----EVEDQKEEVQLLV 97
>d1ccza1 b.1.1.1 (A:1-93) CD2-binding domain of CD58, N-terminal
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 27.6 bits (60), Expect = 0.13
Identities = 8/36 (22%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 34 NGTLIIENVERQSDQATYTCVAKTAQGYSSRGTLEV 69
+G+L I N+ D+ Y + + + L V
Sbjct: 59 SGSLTIYNLTSS-DEDEYEMESPNITD-TMKFFLYV 92
>d1g1ca_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 98
Score = 27.1 bits (59), Expect = 0.16
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Query: 38 IIENVERQSDQATYTCVAKTAQGY-SSRGTLEVQ 70
+I +V + D A+ A G SS L VQ
Sbjct: 64 VIRDVTGE-DSASIMVKAINIAGETSSHAFLLVQ 96
>d1ncna_ b.1.1.1 (A:) CD86 (b7-2), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 110
Score = 27.5 bits (60), Expect = 0.16
Identities = 9/68 (13%), Positives = 21/68 (30%), Gaps = 4/68 (5%)
Query: 7 FLIYSYHQSFYTEGRTLPINRKQKVFPNGTLIIENVERQSDQATYTCVAKTAQGYSSRGT 66
+ + + + R + TL + N+ + D+ Y C+ G
Sbjct: 41 LNEVYLGKEKFDSVHSKYMGRTSFDSDSWTLRLHNL-QIKDKGLYQCIIHH---KKPTGM 96
Query: 67 LEVQVMGI 74
+ + M
Sbjct: 97 IRIHQMNS 104
>d1biha3 b.1.1.4 (A:210-306) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 97
Score = 26.8 bits (58), Expect = 0.24
Identities = 8/39 (20%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 34 NGTLIIENVERQSDQATYTCVAKTAQGYSSRGTLEVQVM 72
L+ + D+ YTC G + +L++ V+
Sbjct: 60 GKRLLFKTTLP-EDEGVYTCEVDNGVGKPQKHSLKLTVV 97
>d1iray3 b.1.1.4 (Y:205-311) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 26.6 bits (57), Expect = 0.27
Identities = 11/62 (17%), Positives = 18/62 (29%), Gaps = 1/62 (1%)
Query: 11 SYHQSFYTEGRTLPINRKQKVFPNGTLIIENVERQSDQATYTCVAKTAQGYSSRG-TLEV 69
K++ L I +E + + +TC AK G + L
Sbjct: 46 DDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIY 105
Query: 70 QV 71
V
Sbjct: 106 PV 107
>d1cs6a4 b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 89
Score = 26.4 bits (57), Expect = 0.34
Identities = 10/35 (28%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Query: 37 LIIENVERQSDQATYTCVAKTAQGY-SSRGTLEVQ 70
L + D Y CVA+ G + L VQ
Sbjct: 55 LRFSKLVL-EDSGMYQCVAENKHGTVYASAELTVQ 88
>d2aw2a1 b.1.1.1 (A:34-137) B- and T-lymphocyte attenuator CD272
{Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 25.8 bits (55), Expect = 0.65
Identities = 7/37 (18%), Positives = 12/37 (32%), Gaps = 1/37 (2%)
Query: 38 IIENVERQSDQATYTCVAKTAQGYSSRGTLEVQVMGI 74
E V +D +Y C A + + V +
Sbjct: 68 HFEPVLP-NDNGSYRCSANFQSNLIESHSTTLYVTDV 103
>d1tiua_ b.1.1.4 (A:) Twitchin {Human (Homo sapiens), Ig repeat 27
[TaxId: 9606]}
Length = 89
Score = 25.2 bits (54), Expect = 0.90
Identities = 8/37 (21%), Positives = 14/37 (37%), Gaps = 4/37 (10%)
Query: 36 TLIIENVERQSDQATYTCVAKTAQGYSSRGTLEVQVM 72
LI+ N + + A A S L+V+ +
Sbjct: 57 ILILHNCQL-GMTGEVSFQAANA---KSAANLKVKEL 89
>d1biha2 b.1.1.4 (A:99-209) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 111
Score = 25.0 bits (53), Expect = 1.1
Identities = 14/76 (18%), Positives = 22/76 (28%)
Query: 1 MPPLLLFLIYSYHQSFYTEGRTLPINRKQKVFPNGTLIIENVERQSDQATYTCVAKTAQG 60
PL+ + + N I E SD Y C AK A
Sbjct: 31 PKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAV 90
Query: 61 YSSRGTLEVQVMGINE 76
+E ++ G+ +
Sbjct: 91 DEEVVLVEYEIKGVTK 106
>d1pd6a_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 24.8 bits (53), Expect = 1.3
Identities = 7/25 (28%), Positives = 9/25 (36%), Gaps = 3/25 (12%)
Query: 46 SDQATYTCVAKTAQGYSSRGTLEVQ 70
+D A Y CV L V+
Sbjct: 72 ADDAAYQCVVGGE---KCSTELFVK 93
>d1rhfa2 b.1.1.4 (A:98-182) Tyrosine-protein kinase receptor
tyro3, second domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 85
Score = 24.5 bits (52), Expect = 1.5
Identities = 10/65 (15%), Positives = 19/65 (29%), Gaps = 2/65 (3%)
Query: 8 LIYSYHQSFYTEGRTLPINRKQKVFPNGTLIIENVERQSDQATYTCVAKTAQG--YSSRG 65
L + P + + NV + ++C A +G S
Sbjct: 21 LSCEAVGPPEPVTIVWWRGTTKIGGPAPSPSVLNVTGVTQSTMFSCEAHNLKGLASSRTA 80
Query: 66 TLEVQ 70
T+ +Q
Sbjct: 81 TVHLQ 85
>d2fcba2 b.1.1.4 (A:91-178) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), IIb [TaxId: 9606]}
Length = 88
Score = 23.7 bits (50), Expect = 2.6
Identities = 7/30 (23%), Positives = 8/30 (26%), Gaps = 2/30 (6%)
Query: 44 RQSDQATYTCVAKTAQG--YSSRGTLEVQV 71
S Y C S T+ VQ
Sbjct: 57 NHSHSGDYHCTGNIGYTLYSSKPVTITVQA 86
>d2fug33 d.15.4.2 (3:1-95) Nadh-quinone oxidoreductase chain 3,
Nqo3, N-terminal domain {Thermus thermophilus [TaxId:
274]}
Length = 95
Score = 23.7 bits (50), Expect = 3.0
Identities = 8/52 (15%), Positives = 17/52 (32%)
Query: 22 TLPINRKQKVFPNGTLIIENVERQSDQATYTCVAKTAQGYSSRGTLEVQVMG 73
+ +N + P GT +++ V C K + V++
Sbjct: 3 RVKVNDRIVEVPPGTSVMDAVFHAGYDVPLFCSEKHLSPIGACRMCLVRIGL 54
>d1cs6a1 b.1.1.4 (A:7-103) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 97
Score = 23.7 bits (50), Expect = 3.4
Identities = 9/45 (20%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 26 NRKQKVFPNGTLIIENVERQSDQATYTCVAKTAQGYSSRGTLEVQ 70
+ + ++ +I V+ + D +Y CVA A+G ++
Sbjct: 53 DSRYRLVAGDLVISNPVKAK-DAGSYQCVATNARGTVVSREASLR 96
>d1f2qa2 b.1.1.4 (A:86-174) IgE high affinity receptor alpha
subunit {Human (Homo sapiens) [TaxId: 9606]}
Length = 89
Score = 23.4 bits (49), Expect = 4.3
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Query: 32 FPNGTLIIENVERQSDQATYTCVAKTAQGYSSRGTLEVQVM 72
+ N + I N D TY C K Q L + V+
Sbjct: 46 YENHNISITNA-TVEDSGTYYCTGKVWQLDYESEPLNITVI 85
>d1jhsa_ d.107.1.1 (A:) Ran-binding protein mog1p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 188
Score = 23.0 bits (49), Expect = 6.6
Identities = 6/36 (16%), Positives = 14/36 (38%)
Query: 13 HQSFYTEGRTLPINRKQKVFPNGTLIIENVERQSDQ 48
Q+ Y R + + N ++I++ +E
Sbjct: 33 TQAVYVNSRRDEEEFEDGLATNESIIVDLLETVDKS 68
>d2oz4a3 b.1.1.4 (A:367-450) Intercellular adhesion molecule-1,
ICAM-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 84
Score = 22.6 bits (47), Expect = 7.9
Identities = 9/26 (34%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Query: 47 DQATYTCVAKTAQGYSSR-GTLEVQV 71
+ TY C A++ QG +R T+ V
Sbjct: 58 LEGTYLCRARSTQGEVTREVTVNVLS 83
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.133 0.379
Gapped
Lambda K H
0.267 0.0491 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 309,606
Number of extensions: 10975
Number of successful extensions: 61
Number of sequences better than 10.0: 1
Number of HSP's gapped: 60
Number of HSP's successfully gapped: 50
Length of query: 94
Length of database: 2,407,596
Length adjustment: 57
Effective length of query: 37
Effective length of database: 1,624,986
Effective search space: 60124482
Effective search space used: 60124482
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 47 (22.5 bits)