Query psy14474
Match_columns 550
No_of_seqs 508 out of 4535
Neff 9.7
Searched_HMMs 29240
Date Fri Aug 16 20:46:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14474.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14474hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 6.1E-41 2.1E-45 348.8 19.0 275 92-396 80-383 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 5.5E-41 1.9E-45 349.2 17.6 314 39-399 11-353 (437)
3 1wdy_A 2-5A-dependent ribonucl 100.0 4.1E-37 1.4E-41 300.2 24.0 271 41-384 4-280 (285)
4 3d9h_A CDNA FLJ77766, highly s 100.0 2.8E-37 9.4E-42 302.2 22.0 267 39-383 12-280 (285)
5 3ljn_A Hypothetical protein; a 100.0 5.3E-38 1.8E-42 318.6 15.3 277 39-387 17-319 (364)
6 4g8k_A 2-5A-dependent ribonucl 100.0 6.5E-37 2.2E-41 307.2 23.1 253 19-320 31-298 (337)
7 1wdy_A 2-5A-dependent ribonucl 100.0 5.3E-36 1.8E-40 292.3 25.5 245 16-320 19-278 (285)
8 2xai_A ASB-9, ankyrin repeat a 100.0 3.8E-36 1.3E-40 290.3 23.8 219 41-380 2-220 (261)
9 3utm_A Tankyrase-1; tankyrase, 100.0 7.4E-37 2.5E-41 307.9 19.2 267 39-352 21-320 (351)
10 1yyh_A HN1;, notch 1, ankyrin 100.0 7.3E-37 2.5E-41 293.9 18.3 228 39-319 7-247 (253)
11 4b93_B Ankyrin repeat domain-c 100.0 3.5E-37 1.2E-41 298.4 14.7 233 41-320 10-244 (269)
12 1k1a_A B-cell lymphoma 3-encod 100.0 7.9E-37 2.7E-41 291.0 16.8 231 39-319 6-240 (241)
13 1oy3_D Transcription factor in 100.0 4E-36 1.4E-40 293.1 21.4 238 39-353 6-266 (282)
14 3aji_A 26S proteasome non-ATPa 100.0 4.8E-36 1.6E-40 283.8 20.0 226 41-320 5-230 (231)
15 2fo1_E LIN-12 protein; beta-ba 100.0 1.5E-36 5.3E-41 308.6 16.5 261 39-382 91-371 (373)
16 3b7b_A Euchromatic histone-lys 100.0 1.2E-35 4E-40 282.3 21.1 225 39-317 8-232 (237)
17 2dzn_A Probable 26S proteasome 100.0 7.9E-35 2.7E-39 274.8 24.6 211 42-352 2-215 (228)
18 3d9h_A CDNA FLJ77766, highly s 100.0 1.3E-35 4.5E-40 290.3 19.2 223 39-320 56-279 (285)
19 1yyh_A HN1;, notch 1, ankyrin 100.0 5E-35 1.7E-39 281.1 21.5 210 90-353 8-231 (253)
20 3aji_A 26S proteasome non-ATPa 100.0 8.2E-35 2.8E-39 275.3 21.5 222 92-381 6-229 (231)
21 2rfa_A Transient receptor pote 100.0 1.6E-34 5.5E-39 273.6 21.4 211 41-320 2-222 (232)
22 4gpm_A Engineered protein OR26 100.0 1.4E-34 4.7E-39 259.2 19.6 156 129-320 6-161 (169)
23 2fo1_E LIN-12 protein; beta-ba 100.0 1.5E-35 5.2E-40 301.3 14.8 244 40-320 123-371 (373)
24 4b93_B Ankyrin repeat domain-c 100.0 3.1E-35 1.1E-39 284.7 14.7 209 92-352 11-225 (269)
25 1ikn_D Protein (I-kappa-B-alph 100.0 1E-34 3.5E-39 275.8 17.8 202 89-320 5-209 (236)
26 2f8y_A Notch homolog 1, transl 100.0 1E-33 3.4E-38 266.3 24.4 213 103-382 2-216 (223)
27 3b7b_A Euchromatic histone-lys 100.0 2.1E-34 7.3E-39 273.6 19.9 208 90-352 9-217 (237)
28 1k1a_A B-cell lymphoma 3-encod 100.0 2.3E-34 7.9E-39 273.9 19.9 215 89-352 6-223 (241)
29 2f8y_A Notch homolog 1, transl 100.0 8.7E-35 3E-39 273.6 16.5 194 90-320 23-216 (223)
30 4g8k_A 2-5A-dependent ribonucl 100.0 4.8E-34 1.6E-38 286.3 22.6 252 41-353 24-281 (337)
31 3ljn_A Hypothetical protein; a 100.0 7.3E-35 2.5E-39 295.5 15.0 245 89-385 17-272 (364)
32 1oy3_D Transcription factor in 100.0 1.2E-34 4.3E-39 282.5 15.8 215 120-396 2-264 (282)
33 3eu9_A Huntingtin-interacting 100.0 6.5E-34 2.2E-38 270.3 20.0 227 40-320 7-235 (240)
34 3kea_A K1L; tropism, ANK repea 100.0 3.2E-34 1.1E-38 280.4 16.2 157 127-320 62-220 (285)
35 2etb_A Transient receptor pote 100.0 2.9E-34 1E-38 276.2 13.2 210 92-320 2-246 (256)
36 3eu9_A Huntingtin-interacting 100.0 6.8E-33 2.3E-37 263.2 21.4 228 90-383 7-236 (240)
37 2pnn_A Transient receptor pote 100.0 8.7E-34 3E-38 275.6 14.9 217 89-320 10-258 (273)
38 3utm_A Tankyrase-1; tankyrase, 100.0 6.3E-33 2.2E-37 279.1 21.7 224 39-320 55-334 (351)
39 3hra_A Ankyrin repeat family p 100.0 4.6E-33 1.6E-37 257.4 19.1 192 90-318 3-201 (201)
40 3kea_A K1L; tropism, ANK repea 100.0 6.9E-34 2.4E-38 278.0 14.2 217 39-320 28-246 (285)
41 2xai_A ASB-9, ankyrin repeat a 100.0 6.1E-33 2.1E-37 267.8 20.5 207 15-320 16-222 (261)
42 1s70_B 130 kDa myosin-binding 100.0 8.4E-34 2.9E-38 279.4 14.6 207 91-352 39-272 (299)
43 2rfa_A Transient receptor pote 100.0 5.8E-32 2E-36 256.0 22.1 208 126-386 2-226 (232)
44 1ikn_D Protein (I-kappa-B-alph 100.0 1.1E-33 3.9E-38 268.5 10.1 200 121-383 2-210 (236)
45 1s70_B 130 kDa myosin-binding 100.0 2E-34 6.7E-39 283.9 4.8 246 41-317 39-286 (299)
46 2rfm_A Putative ankyrin repeat 100.0 3.2E-32 1.1E-36 250.0 18.3 164 120-319 28-191 (192)
47 3jxi_A Vanilloid receptor-rela 100.0 4E-33 1.4E-37 268.8 11.6 212 92-320 5-250 (260)
48 2etb_A Transient receptor pote 100.0 8.4E-32 2.9E-36 259.0 19.7 215 126-386 1-250 (256)
49 2pnn_A Transient receptor pote 100.0 2.2E-32 7.6E-37 265.7 14.6 227 120-388 6-265 (273)
50 2dzn_A Probable 26S proteasome 100.0 4.3E-31 1.5E-35 249.1 21.2 196 127-383 2-201 (228)
51 4gpm_A Engineered protein OR26 100.0 9.4E-32 3.2E-36 240.8 15.4 157 96-290 8-164 (169)
52 3hra_A Ankyrin repeat family p 100.0 6.7E-31 2.3E-35 242.8 21.3 194 124-380 2-201 (201)
53 3v31_A Ankyrin repeat family A 100.0 3.1E-31 1.1E-35 237.6 17.8 159 126-320 2-160 (167)
54 3v30_A DNA-binding protein rfx 100.0 2.6E-31 8.8E-36 239.3 17.4 158 127-320 2-160 (172)
55 1ihb_A P18-INK4C(INK6), cyclin 100.0 2.1E-31 7.2E-36 237.3 16.1 159 125-320 3-162 (162)
56 2y1l_E Darpin-8.4; hydrolase-i 100.0 1E-30 3.6E-35 234.7 19.3 160 123-318 10-169 (169)
57 4hbd_A KN motif and ankyrin re 100.0 1E-31 3.5E-36 261.2 12.9 188 95-318 79-273 (276)
58 1sw6_A Regulatory protein SWI6 100.0 3.9E-32 1.3E-36 271.0 8.6 238 40-352 50-323 (327)
59 3twr_A Tankyrase-2; ankyrin re 100.0 8.6E-31 2.9E-35 234.2 14.6 161 123-319 4-164 (165)
60 1awc_B Protein (GA binding pro 100.0 4.2E-30 1.4E-34 226.7 18.4 151 127-314 2-152 (153)
61 3jxi_A Vanilloid receptor-rela 100.0 1.2E-30 4.1E-35 251.4 16.1 216 124-385 2-253 (260)
62 3f6q_A Integrin-linked protein 100.0 4.4E-30 1.5E-34 232.9 15.7 161 125-320 3-163 (179)
63 1bd8_A P19INK4D CDK4/6 inhibit 100.0 4.3E-29 1.5E-33 220.8 17.2 154 127-317 2-155 (156)
64 3v30_A DNA-binding protein rfx 100.0 3.3E-29 1.1E-33 225.5 12.7 170 92-298 2-171 (172)
65 1ycs_B 53BP2, P53BP2; ankyrin 100.0 3.8E-29 1.3E-33 237.8 11.3 161 125-322 3-166 (239)
66 2y1l_E Darpin-8.4; hydrolase-i 100.0 6.1E-28 2.1E-32 216.6 18.4 160 38-282 10-169 (169)
67 1sw6_A Regulatory protein SWI6 100.0 1E-29 3.6E-34 253.4 6.4 224 44-306 99-327 (327)
68 1d9s_A Cyclin-dependent kinase 100.0 1.8E-28 6.3E-33 211.6 12.9 134 157-320 2-136 (136)
69 4hbd_A KN motif and ankyrin re 100.0 1.6E-28 5.5E-33 238.7 13.9 190 127-379 76-272 (276)
70 2rfm_A Putative ankyrin repeat 100.0 7.1E-28 2.4E-32 220.9 17.3 159 165-380 32-190 (192)
71 3v31_A Ankyrin repeat family A 100.0 2.9E-27 1E-31 211.6 18.4 160 167-383 2-161 (167)
72 1ihb_A P18-INK4C(INK6), cyclin 100.0 5.8E-28 2E-32 214.9 13.3 154 93-282 6-160 (162)
73 3f6q_A Integrin-linked protein 99.9 1.9E-27 6.6E-32 215.4 15.4 169 40-295 3-171 (179)
74 3t8k_A Uncharacterized protein 99.9 1.7E-28 5.9E-33 223.3 7.1 157 127-320 6-179 (186)
75 1awc_B Protein (GA binding pro 99.9 7.5E-27 2.6E-31 205.8 17.3 151 42-278 2-152 (153)
76 2vge_A RELA-associated inhibit 99.9 5.4E-29 1.8E-33 234.9 1.2 178 121-352 15-195 (229)
77 1bd8_A P19INK4D CDK4/6 inhibit 99.9 4.3E-27 1.5E-31 207.9 13.3 152 94-281 4-155 (156)
78 1bi7_B P16INK4A, MTS1, multipl 99.9 2.1E-27 7E-32 210.1 10.6 141 165-351 9-150 (156)
79 1bi7_B P16INK4A, MTS1, multipl 99.9 2E-27 6.7E-32 210.2 10.2 146 120-302 5-151 (156)
80 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.6E-26 9E-31 194.7 16.3 126 167-320 1-126 (126)
81 1d9s_A Cyclin-dependent kinase 99.9 4.5E-27 1.5E-31 202.8 11.3 130 119-282 4-134 (136)
82 3twr_A Tankyrase-2; ankyrin re 99.9 1.5E-26 5E-31 206.6 14.4 157 166-380 6-163 (165)
83 2jab_A H10-2-G3; HER2, darpin, 99.9 2.1E-26 7.3E-31 198.6 14.6 125 166-318 12-136 (136)
84 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.7E-27 5.7E-32 226.4 7.1 188 91-319 4-203 (239)
85 2vge_A RELA-associated inhibit 99.9 1.1E-26 3.7E-31 219.1 10.1 192 146-370 1-199 (229)
86 3c5r_A BARD-1, BRCA1-associate 99.9 3.5E-26 1.2E-30 197.4 8.6 134 157-320 1-134 (137)
87 2jab_A H10-2-G3; HER2, darpin, 99.9 3E-25 1E-29 191.3 14.3 128 122-282 9-136 (136)
88 3ui2_A Signal recognition part 99.9 9.3E-26 3.2E-30 215.0 11.4 174 89-320 12-185 (244)
89 3t8k_A Uncharacterized protein 99.9 3.5E-26 1.2E-30 208.0 7.1 128 125-282 36-177 (186)
90 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1E-24 3.5E-29 184.8 15.5 124 126-282 1-124 (126)
91 3deo_A Signal recognition part 99.9 1.1E-25 3.6E-30 204.7 9.1 142 123-317 40-181 (183)
92 2aja_A Ankyrin repeat family p 99.9 3.8E-27 1.3E-31 237.6 -1.7 162 122-321 87-251 (376)
93 3aaa_C Myotrophin, protein V-1 99.9 1.3E-24 4.5E-29 183.8 10.2 116 166-309 5-120 (123)
94 2aja_A Ankyrin repeat family p 99.9 1.5E-26 5.1E-31 233.2 -3.2 29 292-320 316-344 (376)
95 3c5r_A BARD-1, BRCA1-associate 99.9 1E-24 3.5E-29 188.2 7.4 128 122-282 5-132 (137)
96 2b0o_E UPLC1; arfgap, structur 99.9 2.3E-24 7.8E-29 211.6 10.1 141 127-308 151-299 (301)
97 3ehr_A Osteoclast-stimulating 99.9 3.2E-24 1.1E-28 201.3 8.4 127 166-320 71-198 (222)
98 3ehr_A Osteoclast-stimulating 99.9 3.1E-24 1.1E-28 201.4 6.5 140 120-295 66-206 (222)
99 3aaa_C Myotrophin, protein V-1 99.9 1.3E-23 4.4E-28 177.6 9.6 113 124-269 4-116 (123)
100 1dcq_A PYK2-associated protein 99.9 1.2E-22 4.1E-27 197.0 16.6 130 169-320 131-263 (278)
101 3deo_A Signal recognition part 99.9 9.7E-24 3.3E-28 191.7 7.2 125 167-320 43-168 (183)
102 3jue_A Arfgap with coiled-coil 99.9 8.7E-23 3E-27 204.9 13.5 152 122-305 194-347 (368)
103 2b0o_E UPLC1; arfgap, structur 99.9 2.4E-22 8.2E-27 197.2 14.9 131 168-320 151-284 (301)
104 1n0q_A 3ANK, 3 ankyrin repeats 99.9 3E-22 1E-26 160.1 12.1 93 225-320 1-93 (93)
105 1dcq_A PYK2-associated protein 99.9 6.1E-22 2.1E-26 192.1 14.6 128 127-283 130-262 (278)
106 3lvq_E ARF-GAP with SH3 domain 99.9 5.4E-22 1.9E-26 208.9 15.0 139 168-328 132-273 (497)
107 1n0q_A 3ANK, 3 ankyrin repeats 99.9 8.1E-22 2.8E-26 157.6 12.3 91 167-282 1-91 (93)
108 3lvq_E ARF-GAP with SH3 domain 99.9 8.4E-22 2.9E-26 207.4 14.3 137 127-304 132-276 (497)
109 3jue_A Arfgap with coiled-coil 99.9 1.2E-21 4E-26 196.7 13.3 129 166-320 197-326 (368)
110 3ui2_A Signal recognition part 99.9 2.9E-22 1E-26 190.7 7.9 111 167-306 44-155 (244)
111 2l6b_A NR1C; ankyrin, consensu 99.8 1.3E-21 4.5E-26 163.0 7.7 107 165-299 6-112 (115)
112 2l6b_A NR1C; ankyrin, consensu 99.8 6.3E-21 2.2E-25 158.9 8.8 108 222-349 5-112 (115)
113 2zgd_A 3 repeat synthetic anky 99.8 1E-18 3.6E-23 144.1 11.3 93 219-314 17-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.8 1.8E-18 6.1E-23 142.7 10.1 88 166-278 22-109 (110)
115 3rvy_A ION transport protein; 25.4 23 0.0008 32.9 1.4 76 446-538 76-151 (285)
116 1gp8_A Protein (scaffolding pr 24.7 46 0.0016 20.2 2.0 19 171-189 16-34 (40)
117 4dxw_A Navrh, ION transport pr 21.4 28 0.00095 31.1 1.0 62 455-529 67-128 (229)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=6.1e-41 Score=348.83 Aligned_cols=275 Identities=21% Similarity=0.184 Sum_probs=169.2
Q ss_pred CccchhhhhhcCCCCccccccccccccccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcH
Q psy14474 92 DQFVIPVEKVLSPLDPLSKWRDHEACWQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASA 171 (550)
Q Consensus 92 ~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tp 171 (550)
+.+++++|+..|+.++++.|++.+.. ++.+|..|.||||+|+.. |+.+++++|+++ +++++..+ ..|.||
T Consensus 80 g~t~L~~A~~~g~~~~v~~Ll~~ga~--~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~----~~~~~~~~-~~g~t~ 149 (437)
T 1n11_A 80 DQTPLHCAARIGHTNMVKLLLENNAN--PNLATTAGHTPLHIAARE---GHVETVLALLEK----EASQACMT-KKGFTP 149 (437)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHHTCC--TTCCCTTCCCHHHHHHHH---TCHHHHHHHHHT----TCCSCCCC-TTSCCH
T ss_pred CCCHHHHHHHCCCHHHHHHHHhCCCC--CCCCCCCCCcHHHHHHHc---CCHHHHHHHHhC----CCCCcCCC-CCCCCH
Confidence 34556666666777776666665543 566666677777777743 444777777766 44444333 356677
Q ss_pred HHHHHHhCCHHHHHHHHHcCCCCCcccc-ccccccccCCCCCC-------CCCCCccCCCCCCchHHHHHHhcCCHHHHH
Q psy14474 172 LHLAIAYANNELVADLIEAGANVTQRAI-GSFFLPRDQQTPRP-------SRHTDYEGLAYLGEYPLSWAACCSNESVYN 243 (550)
Q Consensus 172 Lh~A~~~g~~~~v~~Ll~~ga~~~~~~~-g~~~~~~~~~~~~~-------~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~ 243 (550)
||+|+..|+.+++++|+++|++++..+. |.++++.++..+.. .++.+++.++..|.||||+|+..|+.++++
T Consensus 150 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~ 229 (437)
T 1n11_A 150 LHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVAR 229 (437)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHH
Confidence 7777777777777777777777666664 66666665544432 355666666666677777777777777777
Q ss_pred HHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccc
Q psy14474 244 LLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCKEFW 323 (550)
Q Consensus 244 ~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~~~~ 323 (550)
+|+++|++++.++..|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 230 ~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~---~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~--- 303 (437)
T 1n11_A 230 SLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQ---ANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVM--- 303 (437)
T ss_dssp HHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT---CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCC---
T ss_pred HHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcC---CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCcc---
Confidence 777777777766666777777777777777777777666 66666666777777777777777777777776666
Q ss_pred ccCcccccCCCCCcccccCcCCCCchhhHHHH---------H----------HhCCchhhhhhcch--HHHHHHHHHHHH
Q psy14474 324 RYSNITCSAYPLNALDTLLPDGRTNWNSALFI---------I----------LNGTKEAHLDMLDG--GIIQRLLEEKWK 382 (550)
Q Consensus 324 ~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~---------~----------~~g~~~~~~~~~~~--~~v~~ll~~k~~ 382 (550)
++..+..|.||++.+... + ..|.+|+|.++..+ ++++.|+++|++
T Consensus 304 --------------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~ 369 (437)
T 1n11_A 304 --------------VDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGAS 369 (437)
T ss_dssp --------------TTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred --------------CCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCC
Confidence 444445555555554210 0 12334444444433 456666666655
Q ss_pred HHHHHHHHHHHHHH
Q psy14474 383 TFAQRQFMKRLLIL 396 (550)
Q Consensus 383 ~~~~~~~~~~~l~~ 396 (550)
+..++..+.+++.+
T Consensus 370 ~~~~~~~g~t~l~~ 383 (437)
T 1n11_A 370 PNEVSSDGTTPLAI 383 (437)
T ss_dssp SCCCCSSSCCHHHH
T ss_pred CCCCCCCCCCHHHH
Confidence 54444444444443
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=5.5e-41 Score=349.19 Aligned_cols=314 Identities=18% Similarity=0.139 Sum_probs=266.2
Q ss_pred ccCCcchHHHHHhcChHHHHHHHHHhhccccccCCCCCccchHHHhhhhccCCCccchhhhhhcCCCCcccccccccccc
Q psy14474 39 YKNGGELVDAYNIGGQVEVEKLIKEQFGVLMYNDGTGQVIDKTEYLKWRYRDSDQFVIPVEKVLSPLDPLSKWRDHEACW 118 (550)
Q Consensus 39 ~~~~~~ll~~a~~~g~~~~~k~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~ 118 (550)
...|.||||.|+..|+.+++++|.+++......+. .+.++++.|+..|+.++++.|++.+..
T Consensus 11 ~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~-----------------~~~t~L~~A~~~g~~~~v~~Ll~~g~~- 72 (437)
T 1n11_A 11 GESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNV-----------------KVETPLHMAARAGHTEVAKYLLQNKAK- 72 (437)
T ss_dssp ----CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSS-----------------CCCCHHHHHHHHTCHHHHHHHHHHTCC-
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCC-----------------CCCCHHHHHHHcCCHHHHHHHHhCCCC-
Confidence 45699999999999999999999987544333332 345668999999999999999987654
Q ss_pred ccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccc
Q psy14474 119 QMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRA 198 (550)
Q Consensus 119 ~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~ 198 (550)
+|.+|.+|.||||+|+.. ||.+++++|+++ |++++..+ ..|.||||+|+..|+.+++++|+++|++.+..+
T Consensus 73 -~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~----ga~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~ 143 (437)
T 1n11_A 73 -VNAKAKDDQTPLHCAARI---GHTNMVKLLLEN----NANPNLAT-TAGHTPLHIAAREGHVETVLALLEKEASQACMT 143 (437)
T ss_dssp -SSCCCTTSCCHHHHHHHH---TCHHHHHHHHHH----TCCTTCCC-TTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC
T ss_pred -CCCCCCCCCCHHHHHHHC---CCHHHHHHHHhC----CCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCC
Confidence 899999999999999954 566999999999 77777665 489999999999999999999999999998877
Q ss_pred c-ccccccccCCCCCC-------CCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCC
Q psy14474 199 I-GSFFLPRDQQTPRP-------SRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVND 270 (550)
Q Consensus 199 ~-g~~~~~~~~~~~~~-------~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g 270 (550)
. |.++++.++..+.. .++++++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|
T Consensus 144 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 223 (437)
T 1n11_A 144 KKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQN 223 (437)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcC
Confidence 6 88999988766654 478899999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccCcccccCCCCCcccccCcCCCCchh
Q psy14474 271 KLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCKEFWRYSNITCSAYPLNALDTLLPDGRTNWN 350 (550)
Q Consensus 271 ~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~ 350 (550)
+.+++++|+++| ++++.++..|.||||+|+..|+.+++++|+++|++ ++..+..|.||++
T Consensus 224 ~~~~~~~Ll~~g---~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-----------------~~~~~~~g~t~L~ 283 (437)
T 1n11_A 224 QVEVARSLLQYG---GSANAESVQGVTPLHLAAQEGHAEMVALLLSKQAN-----------------GNLGNKSGLTPLH 283 (437)
T ss_dssp CHHHHHHHHHTT---CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-----------------TTCCCTTCCCHHH
T ss_pred CHHHHHHHHHcC---CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCC-----------------CCCCCCCCCCHHH
Confidence 999999999999 88999999999999999999999999999999998 5566677888887
Q ss_pred hHHHH---------H----------HhCCchhhhhhcch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14474 351 SALFI---------I----------LNGTKEAHLDMLDG--GIIQRLLEEKWKTFAQRQFMKRLLILSLH 399 (550)
Q Consensus 351 ~~~~~---------~----------~~g~~~~~~~~~~~--~~v~~ll~~k~~~~~~~~~~~~~l~~~l~ 399 (550)
.+... + ..|.+++|.++..+ ++++.|+++|.+...++..+.+++.++..
T Consensus 284 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~ 353 (437)
T 1n11_A 284 LVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQ 353 (437)
T ss_dssp HHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHH
Confidence 76321 1 23567888888766 77899999888777766666666665543
No 3
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4.1e-37 Score=300.20 Aligned_cols=271 Identities=22% Similarity=0.184 Sum_probs=222.1
Q ss_pred CCcchHHHHHhcChHHHHHHHHHhhccccccCCCCCccchHHHhhhhccCCCccchhhhhhcCCCCcccccccccccccc
Q psy14474 41 NGGELVDAYNIGGQVEVEKLIKEQFGVLMYNDGTGQVIDKTEYLKWRYRDSDQFVIPVEKVLSPLDPLSKWRDHEACWQM 120 (550)
Q Consensus 41 ~~~~ll~~a~~~g~~~~~k~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~ 120 (550)
+|.|+|+.|+..|..+++++|.+++...... ....+.+++++|+..|+.++++.+++.+.. +
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~----------------~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~ 65 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQ----------------EEEGGWTPLHNAVQMSREDIVELLLRHGAD--P 65 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTCC----------------CTTTCCCHHHHHHHTTCHHHHHHHHHTTCC--T
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcccc----------------cCCCCCcHHHHHHHcCCHHHHHHHHHcCCC--C
Confidence 4789999999999999999999875433222 123445678999999999999999988654 7
Q ss_pred ccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccc
Q psy14474 121 QYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIG 200 (550)
Q Consensus 121 ~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g 200 (550)
+.+|.+|.||||+|+.. |+.+++++|+++ |++++..+ ..|.||||+|+..|+.+++++|+++|++++.++..
T Consensus 66 ~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~----g~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 137 (285)
T 1wdy_A 66 VLRKKNGATPFLLAAIA---GSVKLLKLFLSK----GADVNECD-FYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKT 137 (285)
T ss_dssp TCCCTTCCCHHHHHHHH---TCHHHHHHHHHT----TCCTTCBC-TTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCC
T ss_pred cccCCCCCCHHHHHHHc---CCHHHHHHHHHc----CCCCCccC-cccCCHHHHHHHhCCHHHHHHHHHhCCCccccccc
Confidence 89999999999999965 556999999999 67776655 48999999999999999999999999999876310
Q ss_pred cccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHC-CCCCCCcCCCCChHHHHHHHCCC----HHHH
Q psy14474 201 SFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDS-GAIPDAKDSFGNMILHMVVVNDK----LDMF 275 (550)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~-ga~i~~~d~~g~tpLh~A~~~g~----~~~v 275 (550)
..+.+..+..|.||||+|+..|+.+++++|+++ |++++.+|..|.||||+|+..++ .+++
T Consensus 138 ---------------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~ 202 (285)
T 1wdy_A 138 ---------------KEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAIT 202 (285)
T ss_dssp ---------------CHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHH
T ss_pred ---------------HHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHH
Confidence 001112246789999999999999999999987 99999999999999999999998 8899
Q ss_pred HHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh-cccccccccCcccccCCCCCcccccCcCCCCchhhHHH
Q psy14474 276 GYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLE-LSCKEFWRYSNITCSAYPLNALDTLLPDGRTNWNSALF 354 (550)
Q Consensus 276 ~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~-~g~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~ 354 (550)
++|+++| ++++.+|..|.||||+|+..|+.+++++|++ .|++ ++..+..|+||++.|.
T Consensus 203 ~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-----------------~~~~~~~g~t~l~~A~- 261 (285)
T 1wdy_A 203 HLLLDHG---ADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE-----------------INDTDSDGKTALLLAV- 261 (285)
T ss_dssp HHHHHTT---CCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCC-----------------TTCCCTTSCCHHHHHH-
T ss_pred HHHHHcC---CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCC-----------------ccccCCCCCcHHHHHH-
Confidence 9999998 8889999999999999999999999999998 7887 6666667777776663
Q ss_pred HHHhCCchhhhhhcchHHHHHHHHHHHHHH
Q psy14474 355 IILNGTKEAHLDMLDGGIIQRLLEEKWKTF 384 (550)
Q Consensus 355 ~~~~g~~~~~~~~~~~~~v~~ll~~k~~~~ 384 (550)
..|. .++++.|+++|++..
T Consensus 262 --~~~~---------~~i~~~Ll~~Ga~~~ 280 (285)
T 1wdy_A 262 --ELKL---------KKIAELLCKRGASTD 280 (285)
T ss_dssp --HTTC---------HHHHHHHHHHSSCSC
T ss_pred --HcCc---------HHHHHHHHHcCCCCC
Confidence 2222 257888998887653
No 4
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.8e-37 Score=302.24 Aligned_cols=267 Identities=15% Similarity=0.017 Sum_probs=197.9
Q ss_pred ccCCcchHHHHHhcChHH-HHHHHHHhhccccccCCCCCccchHHHhhhhccCCCccchhhhhhcCCCCccccccccccc
Q psy14474 39 YKNGGELVDAYNIGGQVE-VEKLIKEQFGVLMYNDGTGQVIDKTEYLKWRYRDSDQFVIPVEKVLSPLDPLSKWRDHEAC 117 (550)
Q Consensus 39 ~~~~~~ll~~a~~~g~~~-~~k~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~ 117 (550)
+..|.|++|.|+..|..+ +.+++.......... ..+. ..+ ......+.++++.|+..|+.++++.+++.+.
T Consensus 12 ~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~----~l~~--~~~-~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~- 83 (285)
T 3d9h_A 12 SGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGI----RLLS--NPL-MGDAVSDWSPMHEAAIHGHQLSLRNLISQGW- 83 (285)
T ss_dssp ------------------------------CCSE----ECCC--CTT-CSSSCCSCCHHHHHHHTTCHHHHHHHHHTTC-
T ss_pred chHHHHHHHHHhhcCCCCCcccCCCCccccccch----hhhh--Ccc-cCCCccCCCHHHHHHHcCCHHHHHHHHHCCC-
Confidence 456999999999999855 444443321110000 0000 000 1234567788999999999999999998764
Q ss_pred cccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCcc
Q psy14474 118 WQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQR 197 (550)
Q Consensus 118 ~~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~ 197 (550)
++|.+|.+|.||||+|+.. |+.+++++|+++ |++++..+ ..|.||||+|+..|+.+++++|+++|++++..
T Consensus 84 -~~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~----ga~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 154 (285)
T 3d9h_A 84 -AVNIITADHVSPLHEACLG---GHLSCVKILLKH----GAQVNGVT-ADWHTPLFNACVSGSWDCVNLLLQHGASVQPE 154 (285)
T ss_dssp -CSCEECTTCCCHHHHHHHT---TCHHHHHHHHHT----TCCSSCCC-TTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCS
T ss_pred -CCCCcCCCCCCHHHHHHHC---CcHHHHHHHHHC----CCCCCCCC-CCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCC
Confidence 4899999999999999965 566999999999 77777665 48999999999999999999999999998865
Q ss_pred ccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHH
Q psy14474 198 AIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGY 277 (550)
Q Consensus 198 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~ 277 (550)
+ .|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++
T Consensus 155 ~--------------------------~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~ 208 (285)
T 3d9h_A 155 S--------------------------DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKK 208 (285)
T ss_dssp C--------------------------TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHH
T ss_pred C--------------------------CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 3 69999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccCcccccCCCCCcccccCcCCCCchhhHHHHHH
Q psy14474 278 ALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCKEFWRYSNITCSAYPLNALDTLLPDGRTNWNSALFIIL 357 (550)
Q Consensus 278 Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~ 357 (550)
|+++| ++++. |..|.||||+|+..|+.+++++|+++|++ ++..+.+|+||++.+
T Consensus 209 Ll~~g---a~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad-----------------~~~~d~~g~t~l~~A----- 262 (285)
T 3d9h_A 209 LLESG---ADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGAD-----------------TQAKNAEGKRPVELV----- 262 (285)
T ss_dssp HHHTT---CCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCC-----------------TTCCCTTSCCGGGGS-----
T ss_pred HHHCC---CCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCC-----------------CCCcCCCCCCHHHHh-----
Confidence 99999 88884 89999999999999999999999999998 666666777666554
Q ss_pred hCCchhhhhhcchHHHHHHHHH-HHHH
Q psy14474 358 NGTKEAHLDMLDGGIIQRLLEE-KWKT 383 (550)
Q Consensus 358 ~g~~~~~~~~~~~~~v~~ll~~-k~~~ 383 (550)
..+.++++.|+++ +++.
T Consensus 263 ---------~~~~~~~~~Ll~~~~a~l 280 (285)
T 3d9h_A 263 ---------PPESPLAQLFLEREGASL 280 (285)
T ss_dssp ---------CTTSHHHHHHHHHC----
T ss_pred ---------cCccHHHHHHHHhhccCC
Confidence 3345688999988 5543
No 5
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=5.3e-38 Score=318.58 Aligned_cols=277 Identities=17% Similarity=0.113 Sum_probs=222.7
Q ss_pred ccCCcchHHHHHhcChHHHHHHHHHhhccccccCCCCCccchHHHhhhhccCCCccchhhhhhcCCCCcccccccccccc
Q psy14474 39 YKNGGELVDAYNIGGQVEVEKLIKEQFGVLMYNDGTGQVIDKTEYLKWRYRDSDQFVIPVEKVLSPLDPLSKWRDHEACW 118 (550)
Q Consensus 39 ~~~~~~ll~~a~~~g~~~~~k~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~ 118 (550)
..+|.|+||.|+..|+.+++++|++.+......+. .+.+++++|+..|+.++++.|++.+.
T Consensus 17 d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~-----------------~g~t~L~~A~~~g~~~~v~~Ll~~g~-- 77 (364)
T 3ljn_A 17 DDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNR-----------------FGCTALHLACKFGCVDTAKYLASVGE-- 77 (364)
T ss_dssp CHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-----------------TCCCHHHHHHHHCCHHHHHHHHHHCC--
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC-----------------CCCcHHHHHHHcCCHHHHHHHHHCCC--
Confidence 45699999999999999999999987544333333 34566899999999999999998876
Q ss_pred ccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCcccc-----------------CCCCCCCcHHHHHHHhC--
Q psy14474 119 QMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVE-----------------GEEYLGASALHLAIAYA-- 179 (550)
Q Consensus 119 ~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~-----------------~~~~~g~tpLh~A~~~g-- 179 (550)
+..+.+|.||||+|+. .|+.+++++|++++++.|++++. .+ ..|.||||+|+..|
T Consensus 78 --~~~~~~g~t~L~~A~~---~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~L~~A~~~g~~ 151 (364)
T 3ljn_A 78 --VHSLWHGQKPIHLAVM---ANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKH-CKGQTALHWCVGLGPE 151 (364)
T ss_dssp --CCCCBTTBCHHHHHHH---TTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEE-ESCCCHHHHHHHSCGG
T ss_pred --CccccCCCCHHHHHHH---cCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCC-CCCCCHHHHHHHcCCc
Confidence 3334689999999995 45669999999985444444443 33 48999999999999
Q ss_pred CHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCC-----CCC
Q psy14474 180 NNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAI-----PDA 254 (550)
Q Consensus 180 ~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~-----i~~ 254 (550)
+.++|++|+++|++++.+| ..|.||||+|+..|+.+++++|+++|++ ++.
T Consensus 152 ~~~~v~~Ll~~ga~~~~~d-------------------------~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~ 206 (364)
T 3ljn_A 152 YLEMIKILVQLGASPTAKD-------------------------KADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDY 206 (364)
T ss_dssp GHHHHHHHHHHTCCTTCCC-------------------------TTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTC
T ss_pred hHHHHHHHHHcCCCCcccC-------------------------CCCCCHHHHHHHcCCHHHHHHHHhcccccccccccc
Confidence 9999999999999998876 6899999999999999999999999999 999
Q ss_pred cCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccCcccccCCC
Q psy14474 255 KDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCKEFWRYSNITCSAYP 334 (550)
Q Consensus 255 ~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~~~~~~~ 334 (550)
+|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..|+.+++++|+++|++......+
T Consensus 207 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g---ad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~------- 276 (364)
T 3ljn_A 207 ANKQGNSHLHWAILINWEDVAMRFVEMG---IDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACP------- 276 (364)
T ss_dssp CCTTCCCTTHHHHTTTCHHHHHHHHTTT---CCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCT-------
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcC---CCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCc-------
Confidence 9999999999999999999999999999 999999999999999999999999999999999873211111
Q ss_pred CCcccccCcCCCCchhhHHHHHHhCCchhhhhhcch--HHHHHHHHHHHHHHHHH
Q psy14474 335 LNALDTLLPDGRTNWNSALFIILNGTKEAHLDMLDG--GIIQRLLEEKWKTFAQR 387 (550)
Q Consensus 335 l~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~--~~v~~ll~~k~~~~~~~ 387 (550)
...+.+.... ..+.++++.+...+ +.+..|++.+.+...+.
T Consensus 277 -------~~~~~~~~~~-----~~~~~~l~~aa~~~~~~~v~~ll~~~~~~~~~~ 319 (364)
T 3ljn_A 277 -------YHNGTTVLPD-----RVVWLDFVPAAADPSKQEVLQLLQEKLDEVVRS 319 (364)
T ss_dssp -------TBSSSSBCGG-----GCCCCTTSCSSCCHHHHHHHHHHHHHHHHHHTC
T ss_pred -------ccCccccccc-----ccccccchhhhhccCHHHHHHHHHHHHHHHhhc
Confidence 1122222111 12345555555444 56778888877665443
No 6
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=6.5e-37 Score=307.16 Aligned_cols=253 Identities=18% Similarity=0.147 Sum_probs=162.6
Q ss_pred HHHHhhcCCCchhhHHhhhh-----ccCCcchHHHHHhcChHHHHHHHHHhhccccccCCCCCccchHHHhhhhccCCCc
Q psy14474 19 DRVISQASNEDDCLLYRLAN-----YKNGGELVDAYNIGGQVEVEKLIKEQFGVLMYNDGTGQVIDKTEYLKWRYRDSDQ 93 (550)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~ll~~a~~~g~~~~~k~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 93 (550)
.++.+++.+..+.++....+ .+.|.||||.|+..|+.+++++|++++......+..+...
T Consensus 31 ~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~--------------- 95 (337)
T 4g8k_A 31 KAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATP--------------- 95 (337)
T ss_dssp HHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCH---------------
T ss_pred HHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCch---------------
Confidence 34444444444444443322 2347888888888888888888887765554444444332
Q ss_pred cchhhhhhcCCCCccccccccccccccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccc-----cCCCCCC
Q psy14474 94 FVIPVEKVLSPLDPLSKWRDHEACWQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVV-----EGEEYLG 168 (550)
Q Consensus 94 ~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~-----~~~~~~g 168 (550)
++.++..+..+....+..... +++.+|..|.||||+|+.. |+.+++++|+++|+++..... ...+..|
T Consensus 96 --~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~g~t~l~~A~~~---~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g 168 (337)
T 4g8k_A 96 --FILAAIAGSVKLLKLFLSKGA--DVNECDFYGFTAFMEAAVY---GKVKALKFLYKRGANVNLRRKTKEDQERLRKGG 168 (337)
T ss_dssp --HHHHHHHTCHHHHHHHHTTTC--CTTCBCTTCCBHHHHHHHT---TCHHHHHHHHHTTCCTTCCCCCC-----CTTCS
T ss_pred --hHHHHhcccchhhHHhhhccc--hhhhhccCCCCHHHHHHHc---CcHHHHHHHHHcCCCcchhhccccccccccCCC
Confidence 334444444444444444333 4789999999999999954 556999999999543321110 1123469
Q ss_pred CcHHHHHHHhCCHHHHHHHHH-cCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCC----HHHHH
Q psy14474 169 ASALHLAIAYANNELVADLIE-AGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSN----ESVYN 243 (550)
Q Consensus 169 ~tpLh~A~~~g~~~~v~~Ll~-~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~----~~~v~ 243 (550)
.||||+|+..|+.++|++|++ .|++++.++ ..|.||+|.++..++ .++++
T Consensus 169 ~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d-------------------------~~g~t~l~~~~~~~~~~~~~~i~~ 223 (337)
T 4g8k_A 169 ATALMDAAEKGHVEVLKILLDEMGADVNACD-------------------------NMGRNALIHALLSSDDSDVEAITH 223 (337)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHSCCCTTCCC-------------------------TTSCCHHHHHHHHSCTTTHHHHHH
T ss_pred CcHHHHHHHCCCHHHHHHHHhccCCCcCccC-------------------------CCCCcHHHHHHHHcCcccHHHHHH
Confidence 999999999999999999996 599999887 456666665554332 24556
Q ss_pred HHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Q psy14474 244 LLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCK 320 (550)
Q Consensus 244 ~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~ 320 (550)
+|+++|+++|.+|..|.||||+|+..|+.++++.|++.+. ++++.+|.+|+||||+|++.|+.+++++|+++|++
T Consensus 224 lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~--~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd 298 (337)
T 4g8k_A 224 LLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEH--IEINDTDSDGKTALLLAVELKLKKIAELLCKRGAS 298 (337)
T ss_dssp HHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTT--CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCS
T ss_pred HHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcC--CcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 6666666666666666666666666666666666665421 56666666666666666666666666666666665
No 7
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=5.3e-36 Score=292.33 Aligned_cols=245 Identities=17% Similarity=0.154 Sum_probs=211.0
Q ss_pred hhHHHHHhhcCCCchhhHHhhhhccCCcchHHHHHhcChHHHHHHHHHhhccccccCCCCCccchHHHhhhhccCCCccc
Q psy14474 16 SVLDRVISQASNEDDCLLYRLANYKNGGELVDAYNIGGQVEVEKLIKEQFGVLMYNDGTGQVIDKTEYLKWRYRDSDQFV 95 (550)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a~~~g~~~~~k~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 95 (550)
++++.+++.+.+.+.. +...|.||||.|+..|+.+++++|.+.+......+. .+.++
T Consensus 19 ~~v~~Ll~~g~~~~~~------~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-----------------~g~t~ 75 (285)
T 1wdy_A 19 DLVQQLLEGGANVNFQ------EEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKK-----------------NGATP 75 (285)
T ss_dssp HHHHHHHHTTCCTTCC------CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-----------------TCCCH
T ss_pred HHHHHHHHcCCCcccc------cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCC-----------------CCCCH
Confidence 4555555555443321 245689999999999999999999987554433333 34566
Q ss_pred hhhhhhcCCCCccccccccccccccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCC---------CC
Q psy14474 96 IPVEKVLSPLDPLSKWRDHEACWQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGE---------EY 166 (550)
Q Consensus 96 ~~~~~~~~~~d~~~~l~~~~~~~~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~---------~~ 166 (550)
++.|+..++.++++.+++.+.. ++.+|..|.||||+|+.. |+.+++++|+++ |++++... +.
T Consensus 76 L~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~---~~~~~~~~Ll~~----g~~~~~~~~~~~~~~~~~~ 146 (285)
T 1wdy_A 76 FLLAAIAGSVKLLKLFLSKGAD--VNECDFYGFTAFMEAAVY---GKVKALKFLYKR----GANVNLRRKTKEDQERLRK 146 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC--TTCBCTTCCBHHHHHHHT---TCHHHHHHHHHT----TCCTTCCCCCCHHHHHTTC
T ss_pred HHHHHHcCCHHHHHHHHHcCCC--CCccCcccCCHHHHHHHh---CCHHHHHHHHHh----CCCcccccccHHHHHhhcc
Confidence 8899999999999999987654 889999999999999965 556999999999 55555442 45
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHc-CCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCC----HHH
Q psy14474 167 LGASALHLAIAYANNELVADLIEA-GANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSN----ESV 241 (550)
Q Consensus 167 ~g~tpLh~A~~~g~~~~v~~Ll~~-ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~----~~~ 241 (550)
.|.||||+|+..|+.+++++|+++ |++++.++ ..|.||||+|+..++ .++
T Consensus 147 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-------------------------~~g~t~l~~a~~~~~~~~~~~i 201 (285)
T 1wdy_A 147 GGATALMDAAEKGHVEVLKILLDEMGADVNACD-------------------------NMGRNALIHALLSSDDSDVEAI 201 (285)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCC-------------------------TTSCCHHHHHHHCSCTTTHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccC-------------------------CCCCCHHHHHHHccccchHHHH
Confidence 799999999999999999999998 99988776 689999999999999 999
Q ss_pred HHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHh-CCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Q psy14474 242 YNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALR-HPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCK 320 (550)
Q Consensus 242 v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~ 320 (550)
+++|+++|++++.+|..|.||||+|+..|+.+++++|++ .| ++++.+|..|.||||+|++.|+.+++++|+++|++
T Consensus 202 ~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g---~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~ 278 (285)
T 1wdy_A 202 THLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEH---IEINDTDSDGKTALLLAVELKLKKIAELLCKRGAS 278 (285)
T ss_dssp HHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSS---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSC
T ss_pred HHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccC---CCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999 67 99999999999999999999999999999999998
No 8
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=3.8e-36 Score=290.34 Aligned_cols=219 Identities=17% Similarity=0.068 Sum_probs=175.2
Q ss_pred CCcchHHHHHhcChHHHHHHHHHhhccccccCCCCCccchHHHhhhhccCCCccchhhhhhcCCCCcccccccccccccc
Q psy14474 41 NGGELVDAYNIGGQVEVEKLIKEQFGVLMYNDGTGQVIDKTEYLKWRYRDSDQFVIPVEKVLSPLDPLSKWRDHEACWQM 120 (550)
Q Consensus 41 ~~~~ll~~a~~~g~~~~~k~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~ 120 (550)
+|.||||.|+..|+.+++++|.+++. ++
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~----------------------------------------------------~~ 29 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGW----------------------------------------------------AV 29 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTC----------------------------------------------------CS
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCC----------------------------------------------------CC
Confidence 48899999999999999999997421 25
Q ss_pred ccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccc
Q psy14474 121 QYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIG 200 (550)
Q Consensus 121 ~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g 200 (550)
|.+|.+|.||||+|+.. |+.+++++|+++ |++++..+ ..|.||||+|+..|+.+++++|+++|++++..+
T Consensus 30 ~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~----g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-- 99 (261)
T 2xai_A 30 NIITADHVSPLHEACLG---GHLSCVKILLKH----GAQVNGVT-ADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-- 99 (261)
T ss_dssp SCCCTTCCCHHHHHHHH---TCHHHHHHHHHT----TCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC--
T ss_pred CCcCCCCCCHHHHHHHc---CCHHHHHHHHHC----CCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC--
Confidence 67778888999999854 455899999988 67776655 478899999999999999999999888887543
Q ss_pred cccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHh
Q psy14474 201 SFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALR 280 (550)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~ 280 (550)
.|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++
T Consensus 100 ------------------------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 155 (261)
T 2xai_A 100 ------------------------DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLE 155 (261)
T ss_dssp ------------------------TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHH
T ss_pred ------------------------CCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 68889999999999999999999999999888889999999999999999999998
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccCcccccCCCCCcccccCcCCCCchhhHHHHHHhCC
Q psy14474 281 HPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCKEFWRYSNITCSAYPLNALDTLLPDGRTNWNSALFIILNGT 360 (550)
Q Consensus 281 ~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~g~ 360 (550)
+| ++++. +..|.||||+|+..|+.+++++|+++|++ ++..+.+|+||++.+
T Consensus 156 ~g---~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad-----------------~~~~d~~g~tpl~~A-------- 206 (261)
T 2xai_A 156 SG---ADVNQ-GKGQDSPLHAVARTASEELACLLMDFGAD-----------------TQAKNAEGKRPVELV-------- 206 (261)
T ss_dssp HT---CCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCC-----------------TTCCCTTSCCGGGGS--------
T ss_pred cC---CCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCC-----------------CCCcCCCCCChhhhc--------
Confidence 88 77774 78888999999999999999999998888 566666666665554
Q ss_pred chhhhhhcchHHHHHHHHHH
Q psy14474 361 KEAHLDMLDGGIIQRLLEEK 380 (550)
Q Consensus 361 ~~~~~~~~~~~~v~~ll~~k 380 (550)
..+.++++.|++.+
T Consensus 207 ------~~~~~~~~~ll~~~ 220 (261)
T 2xai_A 207 ------PPESPLAQLFLERE 220 (261)
T ss_dssp ------CTTCTHHHHHHHC-
T ss_pred ------cccccHHHHHHhcc
Confidence 33344666666654
No 9
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=7.4e-37 Score=307.90 Aligned_cols=267 Identities=16% Similarity=0.065 Sum_probs=221.8
Q ss_pred ccCCcchHHHHHhcChHHHHHHHHHhh-ccccccCCCCCccchHHHhhhhccCCCccchhhhhhcCCCCccccccccccc
Q psy14474 39 YKNGGELVDAYNIGGQVEVEKLIKEQF-GVLMYNDGTGQVIDKTEYLKWRYRDSDQFVIPVEKVLSPLDPLSKWRDHEAC 117 (550)
Q Consensus 39 ~~~~~~ll~~a~~~g~~~~~k~L~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~ 117 (550)
.+.+.++|+.|+..|..+.++.|.... ...... ...+.+++|+|+..|+.++++.+++.+..
T Consensus 21 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~-----------------d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 83 (351)
T 3utm_A 21 GEYKKDELLEAARSGNEEKLMALLTPLNVNCHAS-----------------DGRKSTPLHLAAGYNRVRIVQLLLQHGAD 83 (351)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCS-----------------STTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred ccccchhHHHHHHcCCHHHHHHHHHhcCCCcccC-----------------CCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 455889999999999999887776532 111112 23456779999999999999999987654
Q ss_pred cccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCcc
Q psy14474 118 WQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQR 197 (550)
Q Consensus 118 ~~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~ 197 (550)
++.+|..|.||||+|+.. |+.+++++|+++ |++++..+ ..|.||||+|+..|+.+++++|+++|++++..
T Consensus 84 --~~~~~~~g~t~L~~A~~~---g~~~iv~~Ll~~----g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 153 (351)
T 3utm_A 84 --VHAKDKGGLVPLHNACSY---GHYEVTELLLKH----GACVNAMD-LWQFTPLHEAASKNRVEVCSLLLSHGADPTLV 153 (351)
T ss_dssp --TTCCCTTCCCHHHHHHHT---TCHHHHHHHHHT----TCCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred --CCccCCCCCcHHHHHHHC---CCHHHHHHHHHC----CCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc
Confidence 899999999999999954 566999999999 77777655 48999999999999999999999999999988
Q ss_pred cc-ccccccccCCCCC----------------------------CCCCCCccCCCCCCchHHHHHHhc---CCHHHHHHH
Q psy14474 198 AI-GSFFLPRDQQTPR----------------------------PSRHTDYEGLAYLGEYPLSWAACC---SNESVYNLL 245 (550)
Q Consensus 198 ~~-g~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~g~tpLh~A~~~---g~~~~v~~L 245 (550)
+. |.++++.+..... ..........+..|.||||+|+.. +..+++++|
T Consensus 154 ~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~L 233 (351)
T 3utm_A 154 NCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELL 233 (351)
T ss_dssp CTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHH
T ss_pred cCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHH
Confidence 76 7776655432110 011222234567899999999999 558999999
Q ss_pred HHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccc
Q psy14474 246 IDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCKEFWRY 325 (550)
Q Consensus 246 l~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~~~~~~ 325 (550)
+++|++++.+|..|.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 234 l~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g---a~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad----- 305 (351)
T 3utm_A 234 LRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHG---AKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSD----- 305 (351)
T ss_dssp HHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----
T ss_pred HHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCC---CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-----
Confidence 9999999999999999999999999999999999999 99999999999999999999999999999999998
Q ss_pred CcccccCCCCCcccccCcCCCCchhhH
Q psy14474 326 SNITCSAYPLNALDTLLPDGRTNWNSA 352 (550)
Q Consensus 326 ~~~~~~~~~l~~~~~~~~~g~~~~~~~ 352 (550)
++..+..|.||++.+
T Consensus 306 ------------~~~~~~~g~tal~~a 320 (351)
T 3utm_A 306 ------------PSIISLQGFTAAQMG 320 (351)
T ss_dssp ------------TTCCCTTSCCHHHHS
T ss_pred ------------CCCcCCCCCChhhhh
Confidence 666777787776554
No 10
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=7.3e-37 Score=293.91 Aligned_cols=228 Identities=19% Similarity=0.167 Sum_probs=172.9
Q ss_pred ccCCcchHHHHHhcC-------------hHHHHHHHHHhhccccccCCCCCccchHHHhhhhccCCCccchhhhhhcCCC
Q psy14474 39 YKNGGELVDAYNIGG-------------QVEVEKLIKEQFGVLMYNDGTGQVIDKTEYLKWRYRDSDQFVIPVEKVLSPL 105 (550)
Q Consensus 39 ~~~~~~ll~~a~~~g-------------~~~~~k~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 105 (550)
.++|.||||.|+..| ..+++++|++.+..... .....+.+++++|+..|+.
T Consensus 7 d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~----------------~~d~~g~t~L~~A~~~g~~ 70 (253)
T 1yyh_A 7 GPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHN----------------QTDRTGETALHLAARYSRS 70 (253)
T ss_dssp -------------------------------------------------------------CCCTTSCCHHHHHHHTTCH
T ss_pred CCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCccc----------------ccCCCCCcHHHHHHHcCCH
Confidence 457999999999977 88888888876433221 1123456678999999999
Q ss_pred CccccccccccccccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHH
Q psy14474 106 DPLSKWRDHEACWQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVA 185 (550)
Q Consensus 106 d~~~~l~~~~~~~~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~ 185 (550)
++++.+++.+.. ++.+|..|.||||+|+.. |+.+++++|+++++ .+++..+ ..|.||||+|+..|+.++++
T Consensus 71 ~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~~~---~~~~~~~-~~g~t~L~~A~~~~~~~~v~ 141 (253)
T 1yyh_A 71 DAAKRLLEASAD--ANIQDNMGRTPLHAAVSA---DAQGVFQILIRNRA---TDLDARM-HDGTTPLILAARLAVEGMLE 141 (253)
T ss_dssp HHHHHHHHTTCC--TTCCCTTSCCHHHHHHHH---TCHHHHHHHHHSTT---SCTTCCC-TTCCCHHHHHHHHTCSSHHH
T ss_pred HHHHHHHHcCCC--CCCCCCCCCCHHHHHHHc---CCHHHHHHHHHcCC---CCccccC-CCCCcHHHHHHHcChHHHHH
Confidence 999999987654 889999999999999965 45599999999842 2555544 58999999999999999999
Q ss_pred HHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHH
Q psy14474 186 DLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHM 265 (550)
Q Consensus 186 ~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~ 265 (550)
+|+++|++++.++ ..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus 142 ~Ll~~g~~~~~~d-------------------------~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~ 196 (253)
T 1yyh_A 142 DLINSHADVNAVD-------------------------DLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFL 196 (253)
T ss_dssp HHHHTTCCTTCBC-------------------------TTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred HHHHcCCCCCCcC-------------------------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 9999999998876 689999999999999999999999999999999999999999
Q ss_pred HHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccc
Q psy14474 266 VVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSC 319 (550)
Q Consensus 266 A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~ 319 (550)
|+..|+.+++++|+++| ++++.+|..|.||+|+|++.|+.+++++|.+...
T Consensus 197 A~~~~~~~~v~~Ll~~g---a~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~~ 247 (253)
T 1yyh_A 197 AAREGSYETAKVLLDHF---ANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHH 247 (253)
T ss_dssp HHHHTCHHHHHHHHHTT---CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC---
T ss_pred HHHCCCHHHHHHHHHcC---CCccccccCCCCHHHHHHHcCCHHHHHHHHHHhh
Confidence 99999999999999999 9999999999999999999999999999998654
No 11
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.5e-37 Score=298.38 Aligned_cols=233 Identities=19% Similarity=0.181 Sum_probs=169.7
Q ss_pred CCcchHHHHHhcChHHHHHHHHHhhccccccCCCCCccchHHHhhhhccCCCccchhhhhhcCCCC-ccccccccccccc
Q psy14474 41 NGGELVDAYNIGGQVEVEKLIKEQFGVLMYNDGTGQVIDKTEYLKWRYRDSDQFVIPVEKVLSPLD-PLSKWRDHEACWQ 119 (550)
Q Consensus 41 ~~~~ll~~a~~~g~~~~~k~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d-~~~~l~~~~~~~~ 119 (550)
.+.++|+.|+..|+.+++++|++.+......... .+ ........++++.++..+..+ +++.++..+. +
T Consensus 10 ~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~--~~-------~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Ga--d 78 (269)
T 4b93_B 10 REVEKLLRAVADGDLEMVRYLLEWTEEDLEDAED--TV-------SAADPEFCHPLCQCPKCAPAQKRLAKVPASGL--G 78 (269)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTCC-------------------------------------------------CCC--C
T ss_pred cchhHHHHHHHcCCHHHHHHHHHCCCcccccccc--cc-------cccCccCCCHHHHHHHhCCHHHHHHHHHHCCC--C
Confidence 3678999999999999999999865432111110 00 012234556777777766654 5667776654 4
Q ss_pred cccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCcccc
Q psy14474 120 MQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAI 199 (550)
Q Consensus 120 ~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~ 199 (550)
+|.+|.+|.||||+|+..+.. +++++|++. |++++..+ ..|.||+|+|+..++.+++++|+++|++++.+|
T Consensus 79 vn~~d~~G~TpLh~A~~~g~~---~~v~~Ll~~----~a~~~~~~-~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d- 149 (269)
T 4b93_B 79 VNVTSQDGSSPLHVAALHGRA---DLIPLLLKH----GANAGARN-ADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKD- 149 (269)
T ss_dssp TTCCCTTSCCHHHHHHHTTCT---THHHHHHHT----TCCTTCCC-TTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC-
T ss_pred CCCcCCCCCCHHHHHHHcCcH---HHHHHHHhc----CCCcCccC-CCCCCccccccccChHHHHHHHHHCCCCCCCCC-
Confidence 899999999999999976554 999999999 67776665 489999999999999999999999999998876
Q ss_pred ccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHH
Q psy14474 200 GSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYAL 279 (550)
Q Consensus 200 g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll 279 (550)
..|.||||+|+..|+.++|++|+++|+++|.+|..|.||||+|+..|+.+++++|+
T Consensus 150 ------------------------~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll 205 (269)
T 4b93_B 150 ------------------------LSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLL 205 (269)
T ss_dssp ------------------------TTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred ------------------------CCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHHhcccc
Q psy14474 280 RHPKTPASNGILNNDGFTPLTLSCQLGR-ADVFREMLELSCK 320 (550)
Q Consensus 280 ~~g~~~~~~~~~~~~g~tpL~~A~~~g~-~~~~~~Ll~~g~~ 320 (550)
++| ++++.+|.+|+||||+|+++++ .++++.|.+.++.
T Consensus 206 ~~G---ad~~~~d~~G~TpL~~A~~~~~i~~lL~~l~~~~~~ 244 (269)
T 4b93_B 206 LHG---ASVQVLNKRQRTAVDCAEQNSKIMELLQVVPSCVAS 244 (269)
T ss_dssp HTT---CCSCCCCTTSCCSGGGSCTTCHHHHHTTC-------
T ss_pred HCC---CCCCCcCCCCCCHHHHHHhCCcHHHHHHHHHHhchh
Confidence 999 9999999999999999998775 3444445555443
No 12
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=7.9e-37 Score=291.03 Aligned_cols=231 Identities=21% Similarity=0.188 Sum_probs=193.3
Q ss_pred ccCCcchHHHHHhcChHHHHHHHHHhh----ccccccCCCCCccchHHHhhhhccCCCccchhhhhhcCCCCcccccccc
Q psy14474 39 YKNGGELVDAYNIGGQVEVEKLIKEQF----GVLMYNDGTGQVIDKTEYLKWRYRDSDQFVIPVEKVLSPLDPLSKWRDH 114 (550)
Q Consensus 39 ~~~~~~ll~~a~~~g~~~~~k~L~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~ 114 (550)
.++|.||||.|+..|+.+++++|.+.. ...... ...+.+++++|+..++.++++.+++.
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-----------------~~~g~t~L~~A~~~~~~~~v~~Ll~~ 68 (241)
T 1k1a_A 6 DEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIY-----------------NNLRQTPLHLAVITTLPSVVRLLVTA 68 (241)
T ss_dssp -CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCC-----------------CTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcc-----------------cccCCCHHHHHHHcCCHHHHHHHHHc
Confidence 457999999999999999999998732 111111 23456678999999999999999987
Q ss_pred ccccccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCC
Q psy14474 115 EACWQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANV 194 (550)
Q Consensus 115 ~~~~~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 194 (550)
+.. ++.+|..|.||||+|+.. |+.+++++|+++++..+.+++..+ ..|.||||+|+..|+.+++++|+++|+++
T Consensus 69 g~~--~~~~~~~g~t~l~~A~~~---~~~~~~~~Ll~~~~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~ 142 (241)
T 1k1a_A 69 GAS--PMALDRHGQTAAHLACEH---RSPTCLRALLDSAAPGTLDLEARN-YDGLTALHVAVNTECQETVQLLLERGADI 142 (241)
T ss_dssp TCC--TTCCCTTSCCHHHHHHHT---TCHHHHHHHHHHSCTTSCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred CCC--ccccCCCCCCHHHHHHHc---CCHHHHHHHHHcCCCccccccccC-cCCCcHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 654 788899999999999964 555999999999765445666654 48999999999999999999999999998
Q ss_pred CccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHH
Q psy14474 195 TQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDM 274 (550)
Q Consensus 195 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~ 274 (550)
+..+. ..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.++
T Consensus 143 ~~~~~------------------------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 198 (241)
T 1k1a_A 143 DAVDI------------------------KSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPL 198 (241)
T ss_dssp TCCCT------------------------TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHH
T ss_pred ccccc------------------------cCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHH
Confidence 87651 478999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccc
Q psy14474 275 FGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSC 319 (550)
Q Consensus 275 v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~ 319 (550)
+++|+++| ++++.+|..|.||||+|+..|+.++++.|.++++
T Consensus 199 v~~Ll~~g---a~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 199 VRTLVRSG---ADSSLKNCHNDTPLMVARSRRVIDILRGKATRPA 240 (241)
T ss_dssp HHHHHHTT---CCTTCCCTTSCCTTTTCSSHHHHHHHTC------
T ss_pred HHHHHhcC---CCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCCC
Confidence 99999999 8999999999999999999999999999998875
No 13
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=4e-36 Score=293.11 Aligned_cols=238 Identities=19% Similarity=0.136 Sum_probs=188.8
Q ss_pred ccCCcchHHHHHhcChHHHHHHHHHhhccccccCCCCCccchHHHhhhhccCCCccchhhhhhcCCCCcccccccccccc
Q psy14474 39 YKNGGELVDAYNIGGQVEVEKLIKEQFGVLMYNDGTGQVIDKTEYLKWRYRDSDQFVIPVEKVLSPLDPLSKWRDHEACW 118 (550)
Q Consensus 39 ~~~~~~ll~~a~~~g~~~~~k~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~ 118 (550)
.++|.||||.|+..|+.+++++|++.+.. . .
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-------~------------------------------------------~ 36 (282)
T 1oy3_D 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAG-------H------------------------------------------E 36 (282)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHHHTT-------S------------------------------------------G
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCC-------c------------------------------------------c
Confidence 45799999999999999999999975311 0 0
Q ss_pred ccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccc
Q psy14474 119 QMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRA 198 (550)
Q Consensus 119 ~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~ 198 (550)
.++.+|..|.||||+|+.. |+.+++++|+++ |++++..+ ..|.||||+|+..|+.+++++|+++|++.....
T Consensus 37 ~~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~----ga~~~~~~-~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~ 108 (282)
T 1oy3_D 37 YLDLQNDLGQTALHLAAIL---GEASTVEKLYAA----GAGVLVAE-RGGHTALHLACRVRAHTCACVLLQPRPSHPRDA 108 (282)
T ss_dssp GGGCCCTTSCCHHHHHHHH---TCHHHHHHHHHT----TCCSSCCC-TTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC
T ss_pred cccccCCCCCCHHHHHHHc---CCHHHHHHHHHc----CCCCCCCC-CCCCCHHHHHHHcCCcchhHhhhccCCCCchhh
Confidence 1578889999999999965 556999999999 77777665 489999999999999999999999998754322
Q ss_pred c--------------ccccccccCC--------CCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcC
Q psy14474 199 I--------------GSFFLPRDQQ--------TPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKD 256 (550)
Q Consensus 199 ~--------------g~~~~~~~~~--------~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d 256 (550)
. +.++++.... ......+.+++.+|..|.||||+|+..|+.+++++|+++|++++.++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~ 188 (282)
T 1oy3_D 109 SDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPE 188 (282)
T ss_dssp -----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCC
T ss_pred HHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Confidence 1 1112211111 11113456788999999999999999999999999999999999998
Q ss_pred CC-CChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccCcccccCCCC
Q psy14474 257 SF-GNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCKEFWRYSNITCSAYPL 335 (550)
Q Consensus 257 ~~-g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~~~~~~~l 335 (550)
.. |.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 189 ~~~g~tpL~~A~~~~~~~~v~~Ll~~g---ad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~--------------- 250 (282)
T 1oy3_D 189 PTCGRTPLHLAVEAQAASVLELLLKAG---ADPTARMYGGRTPLGSALLRPNPILARLLRAHGAP--------------- 250 (282)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCC---------------
T ss_pred CCCCcCHHHHHHHcCCHHHHHHHHHcC---CCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCC---------------
Confidence 65 999999999999999999999999 99999999999999999999999999999999999
Q ss_pred CcccccCcCCCCchhhHH
Q psy14474 336 NALDTLLPDGRTNWNSAL 353 (550)
Q Consensus 336 ~~~~~~~~~g~~~~~~~~ 353 (550)
++..+.+|.||+..+.
T Consensus 251 --~~~~~~~g~tpl~~a~ 266 (282)
T 1oy3_D 251 --EPEDGGDKLSPCSSSG 266 (282)
T ss_dssp --CCCCC-----------
T ss_pred --cCcCCCcccccccccC
Confidence 7777888999888773
No 14
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=4.8e-36 Score=283.83 Aligned_cols=226 Identities=17% Similarity=0.121 Sum_probs=201.4
Q ss_pred CCcchHHHHHhcChHHHHHHHHHhhccccccCCCCCccchHHHhhhhccCCCccchhhhhhcCCCCcccccccccccccc
Q psy14474 41 NGGELVDAYNIGGQVEVEKLIKEQFGVLMYNDGTGQVIDKTEYLKWRYRDSDQFVIPVEKVLSPLDPLSKWRDHEACWQM 120 (550)
Q Consensus 41 ~~~~ll~~a~~~g~~~~~k~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~ 120 (550)
.+.++|+.|+..|..++++.|.+...... ......+.++++.|+..|+.++++.+++.+. ++
T Consensus 5 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~----------------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~ 66 (231)
T 3aji_A 5 VSNIMICNLAYSGKLDELKERILADKSLA----------------TRTDQDSRTALHWACSAGHTEIVEFLLQLGV--PV 66 (231)
T ss_dssp CSSSHHHHHHHHTCHHHHHHHHHHCGGGG----------------GCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC--CS
T ss_pred cccchHHHHHHhCCHHHHHHHHHhchhhh----------------hcCCCCCCCHHHHHHHcCcHHHHHHHHHhCC--CC
Confidence 47899999999999999999887643211 1122345667899999999999999998765 48
Q ss_pred ccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccc
Q psy14474 121 QYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIG 200 (550)
Q Consensus 121 ~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g 200 (550)
+.+|..|.||||+|+..+ +.+++++|+++ |++++..+ ..|.||||+|+..|+.+++++|+++|++++.++
T Consensus 67 ~~~~~~g~t~L~~A~~~~---~~~~v~~Ll~~----g~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-- 136 (231)
T 3aji_A 67 NDKDDAGWSPLHIAASAG---XDEIVKALLVK----GAHVNAVN-QNGCTPLHYAASKNRHEIAVMLLEGGANPDAKD-- 136 (231)
T ss_dssp CCCCTTSCCHHHHHHHHT---CHHHHHHHHHT----TCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC--
T ss_pred CCcCCCCCCHHHHHHHcC---HHHHHHHHHHc----CCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC--
Confidence 999999999999999654 55999999999 67776655 489999999999999999999999999988776
Q ss_pred cccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHh
Q psy14474 201 SFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALR 280 (550)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~ 280 (550)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++
T Consensus 137 -----------------------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 193 (231)
T 3aji_A 137 -----------------------HYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVT 193 (231)
T ss_dssp -----------------------TTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred -----------------------CCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 689999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Q psy14474 281 HPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCK 320 (550)
Q Consensus 281 ~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~ 320 (550)
+| ++++.+|..|.||||+|+..++.+++++|.++|++
T Consensus 194 ~g---a~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 194 QG---ASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEAS 230 (231)
T ss_dssp TT---CCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHC
T ss_pred CC---CCCCCCCCCCCCHHHHHHhhHHHHHHHHHcccccc
Confidence 99 99999999999999999999999999999999875
No 15
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.5e-36 Score=308.64 Aligned_cols=261 Identities=17% Similarity=0.159 Sum_probs=200.4
Q ss_pred ccCCcchHHHHHhcChHHHHHHHHHhhccccccCCCCCccchHHHhhhhccCCCccchhhhhhcCCCCcccccccc----
Q psy14474 39 YKNGGELVDAYNIGGQVEVEKLIKEQFGVLMYNDGTGQVIDKTEYLKWRYRDSDQFVIPVEKVLSPLDPLSKWRDH---- 114 (550)
Q Consensus 39 ~~~~~~ll~~a~~~g~~~~~k~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~---- 114 (550)
...|.|+||.|+.++. +++++|.+. . +....+..+.+++|+|+..|+.++++.++..
T Consensus 91 ~~~g~t~L~~Aa~~~~-~~~~~L~~~--~----------------~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ 151 (373)
T 2fo1_E 91 EPESPIKLHTEAAGSY-AITEPITRE--S----------------VNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKE 151 (373)
T ss_dssp ---CCCHHHHHHHSSS-CCCSCCSTT--T----------------TTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHH
T ss_pred CCCCccHHHHHhcCCc-hHHHHhccc--c----------------ccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 4568899999888765 455554321 0 1112224567778999999999998888732
Q ss_pred --ccccccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcC-
Q psy14474 115 --EACWQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAG- 191 (550)
Q Consensus 115 --~~~~~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g- 191 (550)
....++|.+|.+|.||||+|+.. |+.++|++|+++ |++++..+ ..|.||||+|+..|+.+++++|+++|
T Consensus 152 ll~~ga~vn~~d~~g~TpL~~A~~~---g~~~iv~~Ll~~----ga~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~~~ 223 (373)
T 2fo1_E 152 CIAAGADVNAMDCDENTPLMLAVLA---RRRRLVAYLMKA----GADPTIYN-KSERSALHQAAANRDFGMMVYMLNSTK 223 (373)
T ss_dssp HHHTCCCTTCCCTTSCCHHHHHHHH---TCHHHHHHHHHT----TCCSCCCC-TTCCCHHHHHHHTTCHHHHHHHTTSHH
T ss_pred HHhcCCCCcCCCCCCCCHHHHHHHc---ChHHHHHHHHHC----CCCCcccC-CCCCCHHHHHHHCCCHHHHHHHHhcCc
Confidence 33345889999999999999955 455999999998 67776655 48999999999999999999999887
Q ss_pred --CCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcC---CHHHHHHHHHCCCCCCC--------cCCC
Q psy14474 192 --ANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCS---NESVYNLLIDSGAIPDA--------KDSF 258 (550)
Q Consensus 192 --a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g---~~~~v~~Ll~~ga~i~~--------~d~~ 258 (550)
++++..+ ..|.||||+|+..+ +.+++++|+++|++++. +|..
T Consensus 224 ~~~~~~~~d-------------------------~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~ 278 (373)
T 2fo1_E 224 LKGDIEELD-------------------------RNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYK 278 (373)
T ss_dssp HHHTTSCCC-------------------------TTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCC
T ss_pred cccChhhcC-------------------------CCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCccccc
Confidence 6776665 68899999999887 88999999999998886 5678
Q ss_pred CChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccCcccccCCCCCcc
Q psy14474 259 GNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCKEFWRYSNITCSAYPLNAL 338 (550)
Q Consensus 259 g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~~~~~~~l~~~ 338 (550)
|.||||+|+..|+.+++++|++++. ++++.+|..|.||||+|+..|+.+++++|+++|++ +
T Consensus 279 g~t~Lh~A~~~g~~~~v~~Ll~~~~--~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad-----------------~ 339 (373)
T 2fo1_E 279 GRTALHYAAQVSNMPIVKYLVGEKG--SNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGAS-----------------V 339 (373)
T ss_dssp CCCTHHHHHSSCCHHHHHHHHHHSC--CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-----------------S
T ss_pred CCCHHHHHHHhCCHHHHHHHHHhcC--CCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----------------c
Confidence 9999999999999999999997653 78899999999999999999999999999999988 6
Q ss_pred cccCcCCCCchhhHHHHHHhCCchhhhhhcchHHHHHHHHHHHH
Q psy14474 339 DTLLPDGRTNWNSALFIILNGTKEAHLDMLDGGIIQRLLEEKWK 382 (550)
Q Consensus 339 ~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~v~~ll~~k~~ 382 (550)
+..+..|.||++.|. ..|.. ++++.|++++.+
T Consensus 340 ~~~d~~g~t~l~~A~---~~g~~---------~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 340 EAVDATDHTARQLAQ---ANNHH---------NIVDIFDRCRPE 371 (373)
T ss_dssp SCCCSSSCCHHHHHH---HTTCH---------HHHHHHHTTC--
T ss_pred cCCCCCCCCHHHHHH---HcCCH---------HHHHHHHhcCcc
Confidence 666667777776663 22221 477888777654
No 16
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.2e-35 Score=282.35 Aligned_cols=225 Identities=18% Similarity=0.168 Sum_probs=198.0
Q ss_pred ccCCcchHHHHHhcChHHHHHHHHHhhccccccCCCCCccchHHHhhhhccCCCccchhhhhhcCCCCcccccccccccc
Q psy14474 39 YKNGGELVDAYNIGGQVEVEKLIKEQFGVLMYNDGTGQVIDKTEYLKWRYRDSDQFVIPVEKVLSPLDPLSKWRDHEACW 118 (550)
Q Consensus 39 ~~~~~~ll~~a~~~g~~~~~k~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~ 118 (550)
.++|.||||.|+..|..+++++|.+++......+. .+.++++.|+..++.++++.+++.+..
T Consensus 8 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-----------------~g~t~L~~A~~~~~~~~v~~Ll~~g~~- 69 (237)
T 3b7b_A 8 HQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSE-----------------DQRTPLMEAAENNHLEAVKYLIKAGAL- 69 (237)
T ss_dssp SCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-----------------TCCCHHHHHHHTTCHHHHHHHHTTTCC-
T ss_pred cCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCC-----------------CCCCHHHHHHHhCCHHHHHHHHhCCCC-
Confidence 45799999999999999999999987544333333 345668899999999999999987764
Q ss_pred ccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccc
Q psy14474 119 QMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRA 198 (550)
Q Consensus 119 ~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~ 198 (550)
++.+|..|.||||+|+.. |+.+++++|++++ ..+++..+ ..|.||||+|+..|+.+++++|+++|++++.++
T Consensus 70 -~~~~~~~g~t~L~~A~~~---~~~~~~~~Ll~~~---~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~ 141 (237)
T 3b7b_A 70 -VDPKDAEGSTCLHLAAKK---GHYEVVQYLLSNG---QMDVNCQD-DGGWTPMIWATEYKHVDLVKLLLSKGSDINIRD 141 (237)
T ss_dssp -CCCCCTTSCCHHHHHHHT---TCHHHHHHHHTTT---CCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred -CCCCCCCCCcHHHHHHHc---CCHHHHHHHHhCC---CCCcccCC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccC
Confidence 789999999999999965 5569999999994 25665554 489999999999999999999999999988776
Q ss_pred cccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHH
Q psy14474 199 IGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYA 278 (550)
Q Consensus 199 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~L 278 (550)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|
T Consensus 142 -------------------------~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 196 (237)
T 3b7b_A 142 -------------------------NEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLF 196 (237)
T ss_dssp -------------------------TTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred -------------------------CCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhc
Q psy14474 279 LRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLEL 317 (550)
Q Consensus 279 l~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~ 317 (550)
+++| ++++.+|.+|.||||+|+..|+.+.+..|++.
T Consensus 197 l~~g---ad~~~~d~~g~t~l~~A~~~~~~~~~~~l~~~ 232 (237)
T 3b7b_A 197 LSRD---SDVTLKNKEGETPLQCASLNSQVWSALQMSKA 232 (237)
T ss_dssp HTTT---CCTTCCCTTSCCHHHHSCTTCHHHHHHHHHHH
T ss_pred HHcC---CCCCccCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999 99999999999999999999999777776653
No 17
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=7.9e-35 Score=274.78 Aligned_cols=211 Identities=17% Similarity=0.160 Sum_probs=183.6
Q ss_pred CcchHHHHHhcChHHHHHHHHHhhccccccCCCCCccchHHHhhhhccCCCccchhhhhhcCCCCccccccccccccccc
Q psy14474 42 GGELVDAYNIGGQVEVEKLIKEQFGVLMYNDGTGQVIDKTEYLKWRYRDSDQFVIPVEKVLSPLDPLSKWRDHEACWQMQ 121 (550)
Q Consensus 42 ~~~ll~~a~~~g~~~~~k~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~ 121 (550)
|.||||.|+..|..+++++|.+.+.. ..+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~---------------------------------------------------~~~ 30 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPS---------------------------------------------------LLL 30 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGG---------------------------------------------------GTT
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCcc---------------------------------------------------ccc
Confidence 68999999999999999999875210 034
Q ss_pred cCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcC--CCCCcccc
Q psy14474 122 YRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAG--ANVTQRAI 199 (550)
Q Consensus 122 ~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g--a~~~~~~~ 199 (550)
.+|..|.||||+|+.. |+.+++++|+++|++ .+++...+..|.||||+|+..|+.+++++|+++| ++++.++
T Consensus 31 ~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~~~~--~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~- 104 (228)
T 2dzn_A 31 QKDQDGRIPLHWSVSF---QAHEITSFLLSKMEN--VNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKIT- 104 (228)
T ss_dssp CCCTTSCCHHHHHHHT---TCHHHHHHHHHTCTT--CCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCC-
T ss_pred cCCCCCCCHHHHHHHc---CCHHHHHHHHhcccc--ccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCC-
Confidence 5788999999999965 456999999999532 5555534568999999999999999999999998 6666654
Q ss_pred ccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHH
Q psy14474 200 GSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYAL 279 (550)
Q Consensus 200 g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll 279 (550)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+
T Consensus 105 ------------------------~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 160 (228)
T 2dzn_A 105 ------------------------NQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLC 160 (228)
T ss_dssp ------------------------TTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ------------------------cCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-hcccccccccCcccccCCCCCcccccCcCCCCchhhH
Q psy14474 280 RHPKTPASNGILNNDGFTPLTLSCQLGRADVFREML-ELSCKEFWRYSNITCSAYPLNALDTLLPDGRTNWNSA 352 (550)
Q Consensus 280 ~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll-~~g~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~~~ 352 (550)
++|. ++++.+|..|+||||+|+..|+.+++++|+ ++|++ ++..+.+|.||++.+
T Consensus 161 ~~g~--~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~-----------------~~~~~~~g~t~l~~A 215 (228)
T 2dzn_A 161 GLGK--SAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAE-----------------YDLVDNKGAKAEDVA 215 (228)
T ss_dssp TTTC--CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCC-----------------SCCBCTTSCBGGGGC
T ss_pred hcCc--ccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC-----------------CCccCCCCCcHHHHH
Confidence 9985 788999999999999999999999999999 89998 677777787777665
No 18
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=290.32 Aligned_cols=223 Identities=17% Similarity=0.055 Sum_probs=196.0
Q ss_pred ccCCcchHHHHHhcChHHHHHHHHHhhccccccCCCCCccchHHHhhhhccCCCccchhhhhhcCCCCcccccccccccc
Q psy14474 39 YKNGGELVDAYNIGGQVEVEKLIKEQFGVLMYNDGTGQVIDKTEYLKWRYRDSDQFVIPVEKVLSPLDPLSKWRDHEACW 118 (550)
Q Consensus 39 ~~~~~~ll~~a~~~g~~~~~k~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~ 118 (550)
...|.||||.|+..|..+++++|++.+......+. .+.+++++|+..|+.++++.+++.+..
T Consensus 56 ~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~-----------------~g~t~L~~A~~~g~~~~v~~Ll~~ga~- 117 (285)
T 3d9h_A 56 AVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITA-----------------DHVSPLHEACLGGHLSCVKILLKHGAQ- 117 (285)
T ss_dssp SCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECT-----------------TCCCHHHHHHHTTCHHHHHHHHHTTCC-
T ss_pred CccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC-----------------CCCCHHHHHHHCCcHHHHHHHHHCCCC-
Confidence 55799999999999999999999987544333333 345668999999999999999988654
Q ss_pred ccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccc
Q psy14474 119 QMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRA 198 (550)
Q Consensus 119 ~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~ 198 (550)
++.+|..|.||||+|+.. |+.+++++|+++ |++++.. ..|.||||+|+..|+.+++++|+++|++++.++
T Consensus 118 -~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~----g~~~~~~--~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d 187 (285)
T 3d9h_A 118 -VNGVTADWHTPLFNACVS---GSWDCVNLLLQH----GASVQPE--SDLASPIHEAARRGHVECVNSLIAYGGNIDHKI 187 (285)
T ss_dssp -SSCCCTTCCCHHHHHHHH---TCHHHHHHHHHT----TCCSSCS--CTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCB
T ss_pred -CCCCCCCCCCHHHHHHHc---CHHHHHHHHHHC----CCCCCCC--CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC
Confidence 899999999999999965 455999999999 5666543 359999999999999999999999999998876
Q ss_pred cccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHH
Q psy14474 199 IGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYA 278 (550)
Q Consensus 199 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~L 278 (550)
..|.||||+|+..|+.+++++|+++|++++. |..|.||||+|+..|+.+++++|
T Consensus 188 -------------------------~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~L 241 (285)
T 3d9h_A 188 -------------------------SHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLL 241 (285)
T ss_dssp -------------------------TTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHH
T ss_pred -------------------------CCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHH
Confidence 6899999999999999999999999999995 88999999999999999999999
Q ss_pred HhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhc-ccc
Q psy14474 279 LRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLEL-SCK 320 (550)
Q Consensus 279 l~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~-g~~ 320 (550)
+++| ++++.+|.+|+||||+|+ ++.+++++|+++ |++
T Consensus 242 l~~g---ad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a~ 279 (285)
T 3d9h_A 242 MDFG---ADTQAKNAEGKRPVELVP--PESPLAQLFLEREGAS 279 (285)
T ss_dssp HHTT---CCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC---
T ss_pred HHCC---CCCCCcCCCCCCHHHHhc--CccHHHHHHHHhhccC
Confidence 9999 999999999999999999 567999999998 665
No 19
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=5e-35 Score=281.10 Aligned_cols=210 Identities=23% Similarity=0.228 Sum_probs=164.2
Q ss_pred CCCccchhhhhhcC-------------CCCccccccccccccccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCC
Q psy14474 90 DSDQFVIPVEKVLS-------------PLDPLSKWRDHEACWQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRL 156 (550)
Q Consensus 90 ~~~~~~~~~~~~~~-------------~~d~~~~l~~~~~~~~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~ 156 (550)
..+.+++|+|+..| +.++++.++..+... .+.+|..|.||||+|+.. |+.+++++|+++
T Consensus 8 ~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~-~~~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~---- 79 (253)
T 1yyh_A 8 PDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASL-HNQTDRTGETALHLAARY---SRSDAAKRLLEA---- 79 (253)
T ss_dssp ---------------------------------------------CCCTTSCCHHHHHHHT---TCHHHHHHHHHT----
T ss_pred CCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCc-ccccCCCCCcHHHHHHHc---CCHHHHHHHHHc----
Confidence 34567788888766 889999999887652 245689999999999965 556999999999
Q ss_pred CCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCC-CCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHh
Q psy14474 157 SQDVVEGEEYLGASALHLAIAYANNELVADLIEAGA-NVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAAC 235 (550)
Q Consensus 157 ~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~ 235 (550)
|++++..+ ..|.||||+|+..|+.+++++|+++|+ +++.++ ..|.||||+|+.
T Consensus 80 g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-------------------------~~g~t~L~~A~~ 133 (253)
T 1yyh_A 80 SADANIQD-NMGRTPLHAAVSADAQGVFQILIRNRATDLDARM-------------------------HDGTTPLILAAR 133 (253)
T ss_dssp TCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCC-------------------------TTCCCHHHHHHH
T ss_pred CCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccC-------------------------CCCCcHHHHHHH
Confidence 77777665 489999999999999999999999987 777665 689999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Q psy14474 236 CSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREML 315 (550)
Q Consensus 236 ~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll 315 (550)
.|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..|+.+++++|+
T Consensus 134 ~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g---a~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll 210 (253)
T 1yyh_A 134 LAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG---ANKDMQNNREETPLFLAAREGSYETAKVLL 210 (253)
T ss_dssp HTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred cChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCCCcCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred hcccccccccCcccccCCCCCcccccCcCCCCchhhHH
Q psy14474 316 ELSCKEFWRYSNITCSAYPLNALDTLLPDGRTNWNSAL 353 (550)
Q Consensus 316 ~~g~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~ 353 (550)
++|++ ++..+..|+||++.|.
T Consensus 211 ~~ga~-----------------~~~~d~~g~tpl~~A~ 231 (253)
T 1yyh_A 211 DHFAN-----------------RDITDHMDRLPRDIAQ 231 (253)
T ss_dssp HTTCC-----------------TTCCCTTCCCHHHHHH
T ss_pred HcCCC-----------------ccccccCCCCHHHHHH
Confidence 99998 6677778888887763
No 20
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=8.2e-35 Score=275.33 Aligned_cols=222 Identities=24% Similarity=0.251 Sum_probs=194.5
Q ss_pred CccchhhhhhcCCCCccccccccccccccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcH
Q psy14474 92 DQFVIPVEKVLSPLDPLSKWRDHEACWQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASA 171 (550)
Q Consensus 92 ~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tp 171 (550)
..++++.|+..|+.+.++.++..... .++.+|..|.||||+|+.. |+.+++++|+++ |++++..+ ..|.||
T Consensus 6 ~~~~l~~A~~~g~~~~v~~ll~~~~~-~~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~----g~~~~~~~-~~g~t~ 76 (231)
T 3aji_A 6 SNIMICNLAYSGKLDELKERILADKS-LATRTDQDSRTALHWACSA---GHTEIVEFLLQL----GVPVNDKD-DAGWSP 76 (231)
T ss_dssp SSSHHHHHHHHTCHHHHHHHHHHCGG-GGGCCCTTSCCHHHHHHHH---TCHHHHHHHHHT----TCCSCCCC-TTSCCH
T ss_pred ccchHHHHHHhCCHHHHHHHHHhchh-hhhcCCCCCCCHHHHHHHc---CcHHHHHHHHHh----CCCCCCcC-CCCCCH
Confidence 45668899999999999988876554 3688999999999999965 456999999999 67777665 489999
Q ss_pred HHHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCC
Q psy14474 172 LHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAI 251 (550)
Q Consensus 172 Lh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 251 (550)
||+|+..|+.+++++|+++|++++.++ ..|.||||+|+..|+.+++++|+++|++
T Consensus 77 L~~A~~~~~~~~v~~Ll~~g~~~~~~~-------------------------~~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 131 (231)
T 3aji_A 77 LHIAASAGXDEIVKALLVKGAHVNAVN-------------------------QNGCTPLHYAASKNRHEIAVMLLEGGAN 131 (231)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCC-------------------------TTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHHcCHHHHHHHHHHcCCCCCCCC-------------------------CCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999988776 6899999999999999999999999999
Q ss_pred CCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccCccccc
Q psy14474 252 PDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCKEFWRYSNITCS 331 (550)
Q Consensus 252 i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~~~~ 331 (550)
++.+|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 132 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----------- 197 (231)
T 3aji_A 132 PDAKDHYDATAMHRAAAKGNLKMVHILLFYK---ASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGAS----------- 197 (231)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT---CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----------
T ss_pred CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcC---CCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-----------
Confidence 9999999999999999999999999999999 99999999999999999999999999999999998
Q ss_pred CCCCCcccccCcCCCCchhhHHHHHHhCCchhhhhhcch--HHHHHHHHHHH
Q psy14474 332 AYPLNALDTLLPDGRTNWNSALFIILNGTKEAHLDMLDG--GIIQRLLEEKW 381 (550)
Q Consensus 332 ~~~l~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~--~~v~~ll~~k~ 381 (550)
++..+..|.||++.+ ...+ .+++.|.+++.
T Consensus 198 ------~~~~~~~g~t~l~~A--------------~~~~~~~i~~lL~~~~a 229 (231)
T 3aji_A 198 ------IYIENKEEKTPLQVA--------------KGGLGLILKRLAEGEEA 229 (231)
T ss_dssp ------SCCCCTTSCCHHHHS--------------CHHHHHHHHHHHHHHHH
T ss_pred ------CCCCCCCCCCHHHHH--------------HhhHHHHHHHHHccccc
Confidence 566666777666554 2222 45777777664
No 21
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.6e-34 Score=273.58 Aligned_cols=211 Identities=31% Similarity=0.459 Sum_probs=178.3
Q ss_pred CCcchHHHHHhcChHHHHHHHHHhhccccccCCCCCccchHHHhhhhccCCCccchhhhhhcCCCCcccccccccccccc
Q psy14474 41 NGGELVDAYNIGGQVEVEKLIKEQFGVLMYNDGTGQVIDKTEYLKWRYRDSDQFVIPVEKVLSPLDPLSKWRDHEACWQM 120 (550)
Q Consensus 41 ~~~~ll~~a~~~g~~~~~k~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~ 120 (550)
.|.||||.|+..|+.+++++|++.. + .++
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~---------g------------------------------------------~~~ 30 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFE---------G------------------------------------------CEV 30 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTT---------C------------------------------------------SCT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhc---------C------------------------------------------CCc
Confidence 3789999999999999999988630 0 126
Q ss_pred ccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccc
Q psy14474 121 QYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIG 200 (550)
Q Consensus 121 ~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g 200 (550)
+.+|.+|.||||+|+.. |+.+++++|++++++.........+..|.||||+|+..|+.+++++|+++|++++.++.+
T Consensus 31 ~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 107 (232)
T 2rfa_A 31 HQRGAMGETALHIAALY---DNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATG 107 (232)
T ss_dssp TCCCTTSCCHHHHHHHT---TCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCS
T ss_pred ccCCCCCCCHHHHHHHc---CCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCC
Confidence 78899999999999965 566999999999433211111334458999999999999999999999999999987642
Q ss_pred cccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHH----H
Q psy14474 201 SFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMF----G 276 (550)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v----~ 276 (550)
... ....+..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++ +
T Consensus 108 ~~~------------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~ 175 (232)
T 2rfa_A 108 SVF------------HYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYN 175 (232)
T ss_dssp GGG------------SCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHH
T ss_pred cce------------eecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHH
Confidence 211 113455667899999999999999999999999999999999999999999999999988 9
Q ss_pred HHHhCCCCCCCC------CCCCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Q psy14474 277 YALRHPKTPASN------GILNNDGFTPLTLSCQLGRADVFREMLELSCK 320 (550)
Q Consensus 277 ~Ll~~g~~~~~~------~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~ 320 (550)
+|+++| ++. +.+|..|.||||+|++.|+.+++++|+++|++
T Consensus 176 ~Ll~~g---~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~ 222 (232)
T 2rfa_A 176 LLLSYD---GGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKH 222 (232)
T ss_dssp HHHHTT---CSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHhcC---CchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 999999 666 58899999999999999999999999999987
No 22
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.4e-34 Score=259.20 Aligned_cols=156 Identities=28% Similarity=0.304 Sum_probs=145.3
Q ss_pred hHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccccC
Q psy14474 129 TLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQ 208 (550)
Q Consensus 129 t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~ 208 (550)
++|+.||+ .|+.++|+.|+++ |+|+|..+ ..|+||||+|+..++.+++++|+++|++++.+|
T Consensus 6 ~~L~~Aa~---~G~~~~v~~Ll~~----Gadvn~~d-~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d---------- 67 (169)
T 4gpm_A 6 KRLIEAAE---NGNKDRVKDLIEN----GADVNASD-SDGRTPLHHAAENGHKEVVKLLISKGADVNAKD---------- 67 (169)
T ss_dssp HHHHHHHH---TTCHHHHHHHHHT----TCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC----------
T ss_pred HHHHHHHH---cCCHHHHHHHHHC----CCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHhcccchhhhc----------
Confidence 57999995 5667999999999 78888766 489999999999999999999999999998876
Q ss_pred CCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCC
Q psy14474 209 QTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASN 288 (550)
Q Consensus 209 ~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~ 288 (550)
..|+||||+|+..|+.+++++|+++|+++|.+|.+|+||||+|+..|+.+++++|+++| +++
T Consensus 68 ---------------~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~g---ad~ 129 (169)
T 4gpm_A 68 ---------------SDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKG---ADV 129 (169)
T ss_dssp ---------------TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT---CCT
T ss_pred ---------------cCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCc
Confidence 68999999999999999999999999999999999999999999999999999999999 999
Q ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Q psy14474 289 GILNNDGFTPLTLSCQLGRADVFREMLELSCK 320 (550)
Q Consensus 289 ~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~ 320 (550)
+.+|.+|+||||+|++.|+.+++++|+++||+
T Consensus 130 ~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ 161 (169)
T 4gpm_A 130 NTSDSDGRTPLDLAREHGNEEVVKLLEKQGGW 161 (169)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHTC---
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 99999999999999999999999999999998
No 23
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.5e-35 Score=301.29 Aligned_cols=244 Identities=13% Similarity=0.086 Sum_probs=202.5
Q ss_pred cCCcchHHHHHhcChHHHHHHHHHhhccccc-cCCCCCccchHHHhhhhccCCCccchhhhhhcCCCCcccccccccccc
Q psy14474 40 KNGGELVDAYNIGGQVEVEKLIKEQFGVLMY-NDGTGQVIDKTEYLKWRYRDSDQFVIPVEKVLSPLDPLSKWRDHEACW 118 (550)
Q Consensus 40 ~~~~~ll~~a~~~g~~~~~k~L~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~ 118 (550)
+.|.||||.|+..|+.+++++|......... .+.+.. .....+.+++++|+..|+.++++.|++.++.
T Consensus 123 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn----------~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~- 191 (373)
T 2fo1_E 123 RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVN----------AMDCDENTPLMLAVLARRRRLVAYLMKAGAD- 191 (373)
T ss_dssp SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTT----------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCc----------CCCCCCCCHHHHHHHcChHHHHHHHHHCCCC-
Confidence 5799999999999999998888742111000 111111 1124566779999999999999999988765
Q ss_pred ccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhC---CHHHHHHHHHcCCCCC
Q psy14474 119 QMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYA---NNELVADLIEAGANVT 195 (550)
Q Consensus 119 ~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g---~~~~v~~Ll~~ga~~~ 195 (550)
++.+|..|.||||+|+.. |+.+++++|++++.. +++++..+ ..|.||||+|+..+ +.+++++|+++|++++
T Consensus 192 -~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~~~~-~~~~~~~d-~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~ 265 (373)
T 2fo1_E 192 -PTIYNKSERSALHQAAAN---RDFGMMVYMLNSTKL-KGDIEELD-RNGMTALMIVAHNEGRDQVASAKLLVEKGAKVD 265 (373)
T ss_dssp -SCCCCTTCCCHHHHHHHT---TCHHHHHHHTTSHHH-HHTTSCCC-TTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSS
T ss_pred -CcccCCCCCCHHHHHHHC---CCHHHHHHHHhcCcc-ccChhhcC-CCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcc
Confidence 889999999999999964 566999999998310 15666655 48999999999998 8999999999999998
Q ss_pred ccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCC-CCCCCcCCCCChHHHHHHHCCCHHH
Q psy14474 196 QRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSG-AIPDAKDSFGNMILHMVVVNDKLDM 274 (550)
Q Consensus 196 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-a~i~~~d~~g~tpLh~A~~~g~~~~ 274 (550)
..+. ...+.+|..|.||||+|+..|+.++|++|+++| ++++.+|..|.||||+|+..|+.++
T Consensus 266 ~~~~-----------------~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~i 328 (373)
T 2fo1_E 266 YDGA-----------------ARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEV 328 (373)
T ss_dssp CCSG-----------------GGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHH
T ss_pred cccc-----------------cccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHH
Confidence 6431 122445679999999999999999999999875 9999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Q psy14474 275 FGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCK 320 (550)
Q Consensus 275 v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~ 320 (550)
+++|+++| ++++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 329 v~~Ll~~g---ad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 329 VMYLIQQG---ASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp HHHHHHTT---CCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred HHHHHHcC---CCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 99999999 99999999999999999999999999999999986
No 24
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.1e-35 Score=284.68 Aligned_cols=209 Identities=21% Similarity=0.135 Sum_probs=162.4
Q ss_pred CccchhhhhhcCCCCcccccccccccc------ccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCC
Q psy14474 92 DQFVIPVEKVLSPLDPLSKWRDHEACW------QMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEE 165 (550)
Q Consensus 92 ~~~~~~~~~~~~~~d~~~~l~~~~~~~------~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~ 165 (550)
+..+++.|+..|+.++++.+++.+... .++..|..|.||||.|+..+. ...+++.|++. |+++|..+
T Consensus 11 ~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~--~~~~v~~Ll~~----Gadvn~~d- 83 (269)
T 4b93_B 11 EVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAP--AQKRLAKVPAS----GLGVNVTS- 83 (269)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHTCC------------------------------------------C----CCCTTCCC-
T ss_pred chhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCC--HHHHHHHHHHC----CCCCCCcC-
Confidence 345688899999999999998766532 257788899999999995432 23588999998 78887766
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHH
Q psy14474 166 YLGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLL 245 (550)
Q Consensus 166 ~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~L 245 (550)
.+|+||||+||..|+.++|++|+++|++++.++ ..|.||+|.|+..++.+++++|
T Consensus 84 ~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~-------------------------~~g~t~l~~a~~~~~~~~~~~L 138 (269)
T 4b93_B 84 QDGSSPLHVAALHGRADLIPLLLKHGANAGARN-------------------------ADQAVPLHLACQQGHFQVVKCL 138 (269)
T ss_dssp TTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCC-------------------------TTCCCHHHHHHHHTCHHHHHHH
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccC-------------------------CCCCCccccccccChHHHHHHH
Confidence 489999999999999999999999999998776 6899999999999999999999
Q ss_pred HHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccc
Q psy14474 246 IDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCKEFWRY 325 (550)
Q Consensus 246 l~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~~~~~~ 325 (550)
+++|+++|.+|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..|+.+++++|+++|+|
T Consensus 139 l~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~g---advn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad----- 210 (269)
T 4b93_B 139 LDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHG---ASINASNNKGNTALHEAVIEKHVFVVELLLLHGAS----- 210 (269)
T ss_dssp HHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTT---CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC-----
T ss_pred HHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC---CCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCC-----
Confidence 9999999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred CcccccCCCCCcccccCcCCCCchhhH
Q psy14474 326 SNITCSAYPLNALDTLLPDGRTNWNSA 352 (550)
Q Consensus 326 ~~~~~~~~~l~~~~~~~~~g~~~~~~~ 352 (550)
++..+.+|+||++.|
T Consensus 211 ------------~~~~d~~G~TpL~~A 225 (269)
T 4b93_B 211 ------------VQVLNKRQRTAVDCA 225 (269)
T ss_dssp ------------SCCCCTTSCCSGGGS
T ss_pred ------------CCCcCCCCCCHHHHH
Confidence 677777888888776
No 25
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1e-34 Score=275.81 Aligned_cols=202 Identities=18% Similarity=0.215 Sum_probs=178.3
Q ss_pred cCCCccchhhhhhcCCCCcccccccccccc--ccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCC
Q psy14474 89 RDSDQFVIPVEKVLSPLDPLSKWRDHEACW--QMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEY 166 (550)
Q Consensus 89 ~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~--~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~ 166 (550)
...+.+++|.|+..|+.++++.++...... ++|.+|..|.||||+|+.. |+.+++++|+++ |++++..+ .
T Consensus 5 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~----g~~~~~~~-~ 76 (236)
T 1ikn_D 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVIT---NQPEIAEALLGA----GCDPELRD-F 76 (236)
T ss_dssp --CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHT---TCHHHHHCCCSC----CCCSCCCC-T
T ss_pred CCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHc---CCHHHHHHHHHc----CCCCCCcC-C
Confidence 345678899999999999999999876542 5899999999999999965 556999999999 77777665 4
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHH
Q psy14474 167 LGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLI 246 (550)
Q Consensus 167 ~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll 246 (550)
.|.||||+|+..|+.+++++|+++|++++... .++..|..|.||||+|+..|+.+++++|+
T Consensus 77 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~-------------------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 137 (236)
T 1ikn_D 77 RGNTPLHLACEQGCLASVGVLTQSCTTPHLHS-------------------ILKATNYNGHTCLHLASIHGYLGIVELLV 137 (236)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSC-------------------GGGCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcccchhHHH-------------------HhhccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 89999999999999999999999998754322 23455678999999999999999999999
Q ss_pred HCCCCCCCcCC-CCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Q psy14474 247 DSGAIPDAKDS-FGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCK 320 (550)
Q Consensus 247 ~~ga~i~~~d~-~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~ 320 (550)
++|++++.++. .|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 138 ~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g---a~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~ 209 (236)
T 1ikn_D 138 SLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCG---ADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE 209 (236)
T ss_dssp HHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTT---CCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCG
T ss_pred HcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCCcccCCCCCHHHHHHccCchHHHHHHHHcchh
Confidence 99999999998 9999999999999999999999999 99999999999999999999999999999999998
No 26
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1e-33 Score=266.33 Aligned_cols=213 Identities=24% Similarity=0.239 Sum_probs=170.3
Q ss_pred CCCCccccccccccccccc-cCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCH
Q psy14474 103 SPLDPLSKWRDHEACWQMQ-YRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANN 181 (550)
Q Consensus 103 ~~~d~~~~l~~~~~~~~~~-~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~ 181 (550)
|+.++++.+++.+.. ++ ..|.+|.||||+|+.. |+.+++++|+++ |++++..+ ..|.||||+|+..|+.
T Consensus 2 g~~~~i~~Ll~~g~~--~~~~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~----g~~~~~~~-~~g~t~L~~A~~~~~~ 71 (223)
T 2f8y_A 2 DAPAVISDFIYQGAS--LHNQTDRTGETALHLAARY---SRSDAAKRLLEA----SADANIQD-NMGRTPLHAAVSADAQ 71 (223)
T ss_dssp ---CCEETTEETTCC--TTCCCTTTCCCHHHHHHHT---TCHHHHHHHHHT----TCCTTCCC-TTSCCHHHHHHHTTCH
T ss_pred CcHHHHHHHHHcCCC--cccccCCCCCchHHHHHHc---CCHHHHHHHHHc----CCCCCCcC-CCCCCHHHHHHHcCCH
Confidence 456777788877654 44 4588899999999954 455999999998 66766654 4889999999999999
Q ss_pred HHHHHHHHcCC-CCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCC
Q psy14474 182 ELVADLIEAGA-NVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGN 260 (550)
Q Consensus 182 ~~v~~Ll~~ga-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~ 260 (550)
+++++|+++++ +++.++ ..|.||||+|+..|+.+++++|+++|++++.+|..|.
T Consensus 72 ~~v~~Ll~~~~~~~~~~~-------------------------~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~ 126 (223)
T 2f8y_A 72 GVFQILIRNRATDLDARM-------------------------HDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGK 126 (223)
T ss_dssp HHHHHHHHBTTSCTTCCC-------------------------TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSC
T ss_pred HHHHHHHHcCCCCcccCC-------------------------CCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCC
Confidence 99999999876 666554 6888999999999999999999999999999999999
Q ss_pred hHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccCcccccCCCCCcccc
Q psy14474 261 MILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCKEFWRYSNITCSAYPLNALDT 340 (550)
Q Consensus 261 tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~~~~~~~l~~~~~ 340 (550)
||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..|+.+++++|+++|++ ++.
T Consensus 127 t~L~~A~~~~~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-----------------~~~ 186 (223)
T 2f8y_A 127 SALHWAAAVNNVDAAVVLLKNG---ANKDMQNNREETPLFLAAREGSYETAKVLLDHFAN-----------------RDI 186 (223)
T ss_dssp BHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-----------------TTC
T ss_pred cHHHHHHHcCCHHHHHHHHHcC---CCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-----------------Ccc
Confidence 9999999999999999999998 88899999999999999999999999999999988 555
Q ss_pred cCcCCCCchhhHHHHHHhCCchhhhhhcchHHHHHHHHHHHH
Q psy14474 341 LLPDGRTNWNSALFIILNGTKEAHLDMLDGGIIQRLLEEKWK 382 (550)
Q Consensus 341 ~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~v~~ll~~k~~ 382 (550)
.+..|.||++.+. ..+. .++++.|+++|+.
T Consensus 187 ~~~~g~t~l~~A~---~~~~---------~~i~~~L~~~g~~ 216 (223)
T 2f8y_A 187 TDHMDRLPRDIAQ---ERMH---------HDIVRLLDEYNLV 216 (223)
T ss_dssp CCTTCCCHHHHHH---HTTC---------HHHHHHHHHTTCS
T ss_pred ccccCCCHHHHHH---Hhcc---------hHHHHHHHHcCCC
Confidence 5666776666553 2222 1578888887753
No 27
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=2.1e-34 Score=273.60 Aligned_cols=208 Identities=20% Similarity=0.198 Sum_probs=181.0
Q ss_pred CCCccchhhhhhcCCCCccccccccccccccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCC
Q psy14474 90 DSDQFVIPVEKVLSPLDPLSKWRDHEACWQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGA 169 (550)
Q Consensus 90 ~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~ 169 (550)
..+.++++.|+..|+.++++.+++.+.. ++.++..|.||||+|+.. |+.+++++|+++ |++++..+ ..|.
T Consensus 9 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~----g~~~~~~~-~~g~ 78 (237)
T 3b7b_A 9 QNKRSPLHAAAEAGHVDICHMLVQAGAN--IDTCSEDQRTPLMEAAEN---NHLEAVKYLIKA----GALVDPKD-AEGS 78 (237)
T ss_dssp CCSCCHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHT---TCHHHHHHHHTT----TCCCCCCC-TTSC
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHHcCCC--cCccCCCCCCHHHHHHHh---CCHHHHHHHHhC----CCCCCCCC-CCCC
Confidence 3456778889888999888888877654 788888899999999954 455999999988 66666554 4788
Q ss_pred cHHHHHHHhCCHHHHHHHHHcC-CCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHC
Q psy14474 170 SALHLAIAYANNELVADLIEAG-ANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDS 248 (550)
Q Consensus 170 tpLh~A~~~g~~~~v~~Ll~~g-a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ 248 (550)
||||+|+..|+.+++++|+++| ++++.++ ..|.||||+|+..|+.+++++|+++
T Consensus 79 t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~-------------------------~~g~t~L~~A~~~~~~~~~~~Ll~~ 133 (237)
T 3b7b_A 79 TCLHLAAKKGHYEVVQYLLSNGQMDVNCQD-------------------------DGGWTPMIWATEYKHVDLVKLLLSK 133 (237)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCCCTTCCC-------------------------TTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred cHHHHHHHcCCHHHHHHHHhCCCCCcccCC-------------------------CCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 9999999999999999999887 6666654 6899999999999999999999999
Q ss_pred CCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccCcc
Q psy14474 249 GAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCKEFWRYSNI 328 (550)
Q Consensus 249 ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~ 328 (550)
|++++.+|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 134 g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad-------- 202 (237)
T 3b7b_A 134 GSDINIRDNEENICLHWAAFSGCVDIAEILLAAK---CDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSD-------- 202 (237)
T ss_dssp TCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTT---CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC--------
T ss_pred CCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcC---CCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCC--------
Confidence 9999999999999999999999999999999999 99999999999999999999999999999999998
Q ss_pred cccCCCCCcccccCcCCCCchhhH
Q psy14474 329 TCSAYPLNALDTLLPDGRTNWNSA 352 (550)
Q Consensus 329 ~~~~~~l~~~~~~~~~g~~~~~~~ 352 (550)
++..+.+|+||++.+
T Consensus 203 ---------~~~~d~~g~t~l~~A 217 (237)
T 3b7b_A 203 ---------VTLKNKEGETPLQCA 217 (237)
T ss_dssp ---------TTCCCTTSCCHHHHS
T ss_pred ---------CCccCCCCCCHHHHH
Confidence 666666777666554
No 28
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=2.3e-34 Score=273.93 Aligned_cols=215 Identities=21% Similarity=0.210 Sum_probs=185.8
Q ss_pred cCCCccchhhhhhcCCCCcccccccc--ccccccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCC
Q psy14474 89 RDSDQFVIPVEKVLSPLDPLSKWRDH--EACWQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEY 166 (550)
Q Consensus 89 ~~~~~~~~~~~~~~~~~d~~~~l~~~--~~~~~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~ 166 (550)
...+.+++|.|+..|+.+.++.+++. ....+++.+|..|.||||+|+.. |+.+++++|+++ |++++..+ .
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~----g~~~~~~~-~ 77 (241)
T 1k1a_A 6 DEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVIT---TLPSVVRLLVTA----GASPMALD-R 77 (241)
T ss_dssp -CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHT---TCHHHHHHHHHT----TCCTTCCC-T
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHc---CCHHHHHHHHHc----CCCccccC-C
Confidence 45677889999999999999888862 22345899999999999999965 556999999999 67776655 4
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHH
Q psy14474 167 LGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLI 246 (550)
Q Consensus 167 ~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll 246 (550)
.|.||||+|+..|+.+++++|+++|+... .+++.+|..|.||||+|+..|+.+++++|+
T Consensus 78 ~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~---------------------~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll 136 (241)
T 1k1a_A 78 HGQTAAHLACEHRSPTCLRALLDSAAPGT---------------------LDLEARNYDGLTALHVAVNTECQETVQLLL 136 (241)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHSCTTS---------------------CCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCcc---------------------ccccccCcCCCcHHHHHHHcCCHHHHHHHH
Confidence 89999999999999999999999987221 122334478999999999999999999999
Q ss_pred HCCCCCCCcC-CCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccc
Q psy14474 247 DSGAIPDAKD-SFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCKEFWRY 325 (550)
Q Consensus 247 ~~ga~i~~~d-~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~~~~~~ 325 (550)
++|++++.++ ..|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 137 ~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----- 208 (241)
T 1k1a_A 137 ERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHG---ANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGAD----- 208 (241)
T ss_dssp HTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT---CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC-----
T ss_pred HcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcC---CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCC-----
Confidence 9999999999 88999999999999999999999999 99999999999999999999999999999999998
Q ss_pred CcccccCCCCCcccccCcCCCCchhhH
Q psy14474 326 SNITCSAYPLNALDTLLPDGRTNWNSA 352 (550)
Q Consensus 326 ~~~~~~~~~l~~~~~~~~~g~~~~~~~ 352 (550)
++..+..|+||++.|
T Consensus 209 ------------~~~~~~~g~tpl~~A 223 (241)
T 1k1a_A 209 ------------SSLKNCHNDTPLMVA 223 (241)
T ss_dssp ------------TTCCCTTSCCTTTTC
T ss_pred ------------CCCcCCCCCCHHHHH
Confidence 666666777777665
No 29
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=8.7e-35 Score=273.60 Aligned_cols=194 Identities=20% Similarity=0.231 Sum_probs=177.6
Q ss_pred CCCccchhhhhhcCCCCccccccccccccccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCC
Q psy14474 90 DSDQFVIPVEKVLSPLDPLSKWRDHEACWQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGA 169 (550)
Q Consensus 90 ~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~ 169 (550)
..+.++++.|+..|+.++++.+++.+.. ++.+|..|.||||+|+.. |+.+++++|+++++ .+++.. +..|.
T Consensus 23 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~~~---~~~~~~-~~~g~ 93 (223)
T 2f8y_A 23 RTGETALHLAARYSRSDAAKRLLEASAD--ANIQDNMGRTPLHAAVSA---DAQGVFQILIRNRA---TDLDAR-MHDGT 93 (223)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHT---TCHHHHHHHHHBTT---SCTTCC-CTTCC
T ss_pred CCCCchHHHHHHcCCHHHHHHHHHcCCC--CCCcCCCCCCHHHHHHHc---CCHHHHHHHHHcCC---CCcccC-CCCCC
Confidence 4556779999999999999999987654 889999999999999965 55699999999842 255444 45899
Q ss_pred cHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCC
Q psy14474 170 SALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSG 249 (550)
Q Consensus 170 tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g 249 (550)
||||+|+..|+.+++++|+++|++++.++ ..|.||||+|+..|+.+++++|+++|
T Consensus 94 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-------------------------~~g~t~L~~A~~~~~~~~v~~Ll~~g 148 (223)
T 2f8y_A 94 TPLILAARLAVEGMLEDLINSHADVNAVD-------------------------DLGKSALHWAAAVNNVDAAVVLLKNG 148 (223)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCBC-------------------------TTSCBHHHHHHHTTCHHHHHHHHHTT
T ss_pred cHHHHHHHhCcHHHHHHHHHcCCCCcCcC-------------------------CCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence 99999999999999999999999998876 68999999999999999999999999
Q ss_pred CCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Q psy14474 250 AIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCK 320 (550)
Q Consensus 250 a~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~ 320 (550)
++++.+|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|++.|+.+++++|+++|+.
T Consensus 149 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---a~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~ 216 (223)
T 2f8y_A 149 ANKDMQNNREETPLFLAAREGSYETAKVLLDHF---ANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLV 216 (223)
T ss_dssp CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT---CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCS
T ss_pred CCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcC---CCCccccccCCCHHHHHHHhcchHHHHHHHHcCCC
Confidence 999999999999999999999999999999999 89999999999999999999999999999999987
No 30
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=4.8e-34 Score=286.31 Aligned_cols=252 Identities=22% Similarity=0.225 Sum_probs=212.4
Q ss_pred CCcchHHHHHhcChHHHHHHHHHhhccccccCCCCCccchHHHhhhhccCCCccchhhhhhcCCCCcccccccccccccc
Q psy14474 41 NGGELVDAYNIGGQVEVEKLIKEQFGVLMYNDGTGQVIDKTEYLKWRYRDSDQFVIPVEKVLSPLDPLSKWRDHEACWQM 120 (550)
Q Consensus 41 ~~~~ll~~a~~~g~~~~~k~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~ 120 (550)
+|.|+|+.|+..|+.+++++|++++.+....+. ..+.+++|+|+..|+.++++.|+++++. +
T Consensus 24 ~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~----------------~~g~TpLh~A~~~g~~~iv~~Ll~~ga~--~ 85 (337)
T 4g8k_A 24 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEE----------------EGGWTPLHNAVQMSREDIVELLLRHGAD--P 85 (337)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCT----------------TTCCCHHHHHHHTTCHHHHHHHHHTTCC--T
T ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCCCccCC----------------CCCcCHHHHHHHcCCHHHHHHHHHcCCc--h
Confidence 478999999999999999999997654433322 2345679999999999999999998876 8
Q ss_pred ccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccc
Q psy14474 121 QYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIG 200 (550)
Q Consensus 121 ~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g 200 (550)
+.++..+.+|++.++..+. .+++..+++. +++++..+ ..|.||||+|+..|+.+++++|+++|++++.++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~----~~~~~~~d-~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~- 156 (337)
T 4g8k_A 86 VLRKKNGATPFILAAIAGS---VKLLKLFLSK----GADVNECD-FYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRK- 156 (337)
T ss_dssp TCCCTTCCCHHHHHHHHTC---HHHHHHHHTT----TCCTTCBC-TTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCC-
T ss_pred hhhccCCCchhHHHHhccc---chhhHHhhhc----cchhhhhc-cCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhc-
Confidence 8999999999999996554 4999999998 67777665 4899999999999999999999999999987652
Q ss_pred cccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHH-CCCCCCCcCCCCChHHHHHHHCCC----HHHH
Q psy14474 201 SFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLID-SGAIPDAKDSFGNMILHMVVVNDK----LDMF 275 (550)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~-~ga~i~~~d~~g~tpLh~A~~~g~----~~~v 275 (550)
...+.+..+..|.||||+|+..|+.++|++|++ .|++++.+|..|.||+|.++..++ .+++
T Consensus 157 --------------~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~ 222 (337)
T 4g8k_A 157 --------------TKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAIT 222 (337)
T ss_dssp --------------CC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHH
T ss_pred --------------cccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHH
Confidence 112334556789999999999999999999996 699999999999999998886544 4688
Q ss_pred HHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhc-ccccccccCcccccCCCCCcccccCcCCCCchhhHH
Q psy14474 276 GYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLEL-SCKEFWRYSNITCSAYPLNALDTLLPDGRTNWNSAL 353 (550)
Q Consensus 276 ~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~-g~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~ 353 (550)
++|+++| ++++.+|..|+||||+|+..|+.++++.|++. |++ ++..+.+|+||++.|.
T Consensus 223 ~lLl~~g---ad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~-----------------vn~~d~~G~TpL~~A~ 281 (337)
T 4g8k_A 223 HLLLDHG---ADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE-----------------INDTDSDGKTALLLAV 281 (337)
T ss_dssp HHHHHTT---CCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCC-----------------TTCBCTTSCBHHHHHH
T ss_pred HHHHHCC---CCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCc-----------------ccCcCCCCCCHHHHHH
Confidence 9999999 99999999999999999999999999999985 677 6667778888777763
No 31
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=7.3e-35 Score=295.45 Aligned_cols=245 Identities=16% Similarity=0.154 Sum_probs=204.4
Q ss_pred cCCCccchhhhhhcCCCCccccccccccccccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCC
Q psy14474 89 RDSDQFVIPVEKVLSPLDPLSKWRDHEACWQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLG 168 (550)
Q Consensus 89 ~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g 168 (550)
...+.+++++|+..|+.++++.+++.+. ++|.+|..|.||||+|+.. ||.+++++|+++ |++++. .+|
T Consensus 17 d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~--~~~~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~----g~~~~~---~~g 84 (364)
T 3ljn_A 17 DDENMEKIHVAARKGQTDEVRRLIETGV--SPTIQNRFGCTALHLACKF---GCVDTAKYLASV----GEVHSL---WHG 84 (364)
T ss_dssp CHHHHHHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTCCCHHHHHHHH---CCHHHHHHHHHH----CCCCCC---BTT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCC--CccccCCCCCcHHHHHHHc---CCHHHHHHHHHC----CCCccc---cCC
Confidence 3455788999999999999999998764 4899999999999999964 566999999999 555443 479
Q ss_pred CcHHHHHHHhCCHHHHHHHHHc----CCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcC--CHHHH
Q psy14474 169 ASALHLAIAYANNELVADLIEA----GANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCS--NESVY 242 (550)
Q Consensus 169 ~tpLh~A~~~g~~~~v~~Ll~~----ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g--~~~~v 242 (550)
.||||+|+..|+.++|++|+++ |++++.... ..........+++.+|..|.||||+|+..| +.+++
T Consensus 85 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v 156 (364)
T 3ljn_A 85 QKPIHLAVMANKTDLVVALVEGAKERGQMPESLLN--------ECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMI 156 (364)
T ss_dssp BCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHT--------CCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHh--------hcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHH
Confidence 9999999999999999999999 777665211 011111222345556789999999999999 99999
Q ss_pred HHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCC-----CCCCCCCCCCHHHHHHHcCCHHHHHHHHhc
Q psy14474 243 NLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPAS-----NGILNNDGFTPLTLSCQLGRADVFREMLEL 317 (550)
Q Consensus 243 ~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~-----~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~ 317 (550)
++|+++|++++.+|..|.||||+|+..|+.+++++|+++| ++ ++.+|..|.||||+|+..|+.+++++|+++
T Consensus 157 ~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g---~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 233 (364)
T 3ljn_A 157 KILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTV---PSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEM 233 (364)
T ss_dssp HHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHC---SCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTT
T ss_pred HHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcc---cccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 9999999999999999999999999999999999999998 66 899999999999999999999999999999
Q ss_pred ccccccccCcccccCCCCCcccccCcCCCCchhhHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHHH
Q psy14474 318 SCKEFWRYSNITCSAYPLNALDTLLPDGRTNWNSALFIILNGTKEAHLDMLDGGIIQRLLEEKWKTFA 385 (550)
Q Consensus 318 g~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~v~~ll~~k~~~~~ 385 (550)
|++ ++..+..|.||++.|. ..|. .++++.|++++.+...
T Consensus 234 gad-----------------~~~~d~~g~tpL~~A~---~~g~---------~~~v~~Ll~~~~~~~~ 272 (364)
T 3ljn_A 234 GID-----------------VNMEDNEHTVPLYLSV---RAAM---------VLLTKELLQKTDVFLI 272 (364)
T ss_dssp TCC-----------------TTCCCTTSCCHHHHHH---HTCC---------HHHHHHHHHHSCHHHH
T ss_pred CCC-----------------CCCCCCCCCCHHHHHH---HhCh---------HHHHHHHHHcCCchhh
Confidence 998 6666777877777663 2222 2589999999876633
No 32
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.2e-34 Score=282.52 Aligned_cols=215 Identities=23% Similarity=0.196 Sum_probs=177.5
Q ss_pred cccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCcccc
Q psy14474 120 MQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAI 199 (550)
Q Consensus 120 ~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~ 199 (550)
++.+|.+|.||||+|+.. |+.+++++|+++|+.. ..++..+ ..|.||||+|+..|+.++|++|+++|++++.++
T Consensus 2 ~~~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~-~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~- 75 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIH---QHEPFLDFLLGFSAGH-EYLDLQN-DLGQTALHLAAILGEASTVEKLYAAGAGVLVAE- 75 (282)
T ss_dssp CCCCCTTCCCHHHHHHHT---TCHHHHHHHHHHHTTS-GGGGCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCC-
T ss_pred CCccCCCCCcHHHHHHHc---CCHHHHHHHHhcCCCc-ccccccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC-
Confidence 578899999999999964 5669999999994321 1155544 589999999999999999999999999998876
Q ss_pred ccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCC----------------------------
Q psy14474 200 GSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAI---------------------------- 251 (550)
Q Consensus 200 g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~---------------------------- 251 (550)
..|.||||+|+..|+.+++++|+++|++
T Consensus 76 ------------------------~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (282)
T 1oy3_D 76 ------------------------RGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVD 131 (282)
T ss_dssp ------------------------TTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------
T ss_pred ------------------------CCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhc
Confidence 6899999999999999999999998765
Q ss_pred -------------------CCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCC-CCCHHHHHHHcCCHHHH
Q psy14474 252 -------------------PDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNND-GFTPLTLSCQLGRADVF 311 (550)
Q Consensus 252 -------------------i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~-g~tpL~~A~~~g~~~~~ 311 (550)
++.+|..|.||||+|+..|+.+++++|+++| ++++.++.. |.||||+|+..|+.+++
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g---~~~~~~~~~~g~tpL~~A~~~~~~~~v 208 (282)
T 1oy3_D 132 SQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAG---ADLNKPEPTCGRTPLHLAVEAQAASVL 208 (282)
T ss_dssp ------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT---CCTTCCCTTTCCCHHHHHHHTTCHHHH
T ss_pred cccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcC---CCCCCCCCCCCcCHHHHHHHcCCHHHH
Confidence 7788999999999999999999999999999 899999854 99999999999999999
Q ss_pred HHHHhcccccccccCcccccCCCCCcccccCcCCCCchhhHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHHHHHHHHH
Q psy14474 312 REMLELSCKEFWRYSNITCSAYPLNALDTLLPDGRTNWNSALFIILNGTKEAHLDMLDGGIIQRLLEEKWKTFAQRQFMK 391 (550)
Q Consensus 312 ~~Ll~~g~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~v~~ll~~k~~~~~~~~~~~ 391 (550)
++|+++|++ ++..+..|+||++.|. ..|. .++++.|+++|++...++..+.
T Consensus 209 ~~Ll~~gad-----------------~~~~d~~g~tpL~~A~---~~~~---------~~~v~~Ll~~ga~~~~~~~~g~ 259 (282)
T 1oy3_D 209 ELLLKAGAD-----------------PTARMYGGRTPLGSAL---LRPN---------PILARLLRAHGAPEPEDGGDKL 259 (282)
T ss_dssp HHHHHTTCC-----------------TTCCCTTSCCHHHHHH---TSSC---------HHHHHHHHHTTCCCCCCC----
T ss_pred HHHHHcCCC-----------------CcccccCCCCHHHHHH---HcCC---------cHHHHHHHHcCCCcCcCCCccc
Confidence 999999998 6666667777776663 1221 2689999999999888877777
Q ss_pred HHHHH
Q psy14474 392 RLLIL 396 (550)
Q Consensus 392 ~~l~~ 396 (550)
+++.+
T Consensus 260 tpl~~ 264 (282)
T 1oy3_D 260 SPCSS 264 (282)
T ss_dssp -----
T ss_pred ccccc
Confidence 76543
No 33
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=6.5e-34 Score=270.30 Aligned_cols=227 Identities=21% Similarity=0.169 Sum_probs=196.7
Q ss_pred cCCcchHHHHHhcChHHHHHHHHHhhccccccCCCCCccchHHHhhhhccCCCccchhhhhhcCCCCccccccccccccc
Q psy14474 40 KNGGELVDAYNIGGQVEVEKLIKEQFGVLMYNDGTGQVIDKTEYLKWRYRDSDQFVIPVEKVLSPLDPLSKWRDHEACWQ 119 (550)
Q Consensus 40 ~~~~~ll~~a~~~g~~~~~k~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~ 119 (550)
..|.++|+.|+..|..+++++|.+.+......+. .+.++++.|+..++.++++.+++.+...+
T Consensus 7 ~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~-----------------~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~ 69 (240)
T 3eu9_A 7 DYSTWDIVKATQYGIYERCRELVEAGYDVRQPDK-----------------ENVTLLHWAAINNRIDLVKYYISKGAIVD 69 (240)
T ss_dssp CGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCT-----------------TSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred cccchHHHHHHHcCChHHHHHHHHcCCCcCCCCC-----------------CCCCHHHHHHHhCCHHHHHHHHHcCCcch
Confidence 3588999999999999999999987544333333 34456889999999999999998776522
Q ss_pred cccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCcccc
Q psy14474 120 MQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAI 199 (550)
Q Consensus 120 ~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~ 199 (550)
...+..|.||||+|+.. |+.+++++|+++ |++++..+ ..|.||||+|+..|+.+++++|+++|++++.++
T Consensus 70 -~~~~~~~~t~L~~A~~~---~~~~~v~~Ll~~----g~~~~~~~-~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~- 139 (240)
T 3eu9_A 70 -QLGGDLNSTPLHWATRQ---GHLSMVVQLMKY----GADPSLID-GEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMD- 139 (240)
T ss_dssp -CCBTTTTBCHHHHHHHH---TCHHHHHHHHHT----TCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-
T ss_pred -hhcCCcCCChhHHHHHc---CCHHHHHHHHHc----CCCCcccC-CCCCCHHHHHHHcCHHHHHHHHHhcCCCccccC-
Confidence 34456699999999965 556999999999 67776655 489999999999999999999999999988776
Q ss_pred ccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCC-HHHHHHHHHCCCCCCCcCC-CCChHHHHHHHCCCHHHHHH
Q psy14474 200 GSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSN-ESVYNLLIDSGAIPDAKDS-FGNMILHMVVVNDKLDMFGY 277 (550)
Q Consensus 200 g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~-~~~v~~Ll~~ga~i~~~d~-~g~tpLh~A~~~g~~~~v~~ 277 (550)
..|.||||+|+..++ .+++++|++.|++++.++. .|.||||+|+..|+.+++++
T Consensus 140 ------------------------~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 195 (240)
T 3eu9_A 140 ------------------------QNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISL 195 (240)
T ss_dssp ------------------------TTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHH
T ss_pred ------------------------CCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHH
Confidence 689999999997766 8999999999999999997 89999999999999999999
Q ss_pred HHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Q psy14474 278 ALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCK 320 (550)
Q Consensus 278 Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~ 320 (550)
|+++| ++++.+|..|.||||+|++.|+.+++++|++++++
T Consensus 196 Ll~~g---~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~ 235 (240)
T 3eu9_A 196 LLEAG---ANVDAQNIKGESALDLAKQRKNVWMINHLQEARQA 235 (240)
T ss_dssp HHHHT---CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC--
T ss_pred HHHcC---CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhc
Confidence 99999 99999999999999999999999999999999987
No 34
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=3.2e-34 Score=280.40 Aligned_cols=157 Identities=17% Similarity=0.153 Sum_probs=98.3
Q ss_pred CChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccc
Q psy14474 127 GETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPR 206 (550)
Q Consensus 127 g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~ 206 (550)
|.||||+|+.. |+.+++++|+++ |++++..+ ..|.||||+|+..|+.+++++|+++|++++.++
T Consensus 62 g~t~L~~A~~~---g~~~~v~~Ll~~----ga~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~-------- 125 (285)
T 3kea_A 62 NEFPLHQAATL---EDTKIVKILLFS----GLDDSQFD-DKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYG-------- 125 (285)
T ss_dssp TCCHHHHHTTS---SSCHHHHHHHHT----TCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCS--------
T ss_pred CCCHHHHHHHc---CCHHHHHHHHHC----CCCCCCcC-CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccC--------
Confidence 66666666633 334666666666 55555443 356666666666666666666666666666554
Q ss_pred cCCCCCCCCCCCccCCCCCC-chHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCC
Q psy14474 207 DQQTPRPSRHTDYEGLAYLG-EYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTP 285 (550)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~g-~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~ 285 (550)
..| .||||+|+..|+.+++++|+++|+++... ..|.||||+|+..|+.+++++|+++|
T Consensus 126 -----------------~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~g--- 184 (285)
T 3kea_A 126 -----------------KTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYM--- 184 (285)
T ss_dssp -----------------SSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHH---
T ss_pred -----------------CCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcC---
Confidence 355 56666666666666666666666555222 15666666666666666666666666
Q ss_pred CCCCCCCCCCCCH-HHHHHHcCCHHHHHHHHhcccc
Q psy14474 286 ASNGILNNDGFTP-LTLSCQLGRADVFREMLELSCK 320 (550)
Q Consensus 286 ~~~~~~~~~g~tp-L~~A~~~g~~~~~~~Ll~~g~~ 320 (550)
++++.+|..|.|| ||+|+..|+.+++++|+++|++
T Consensus 185 ad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad 220 (285)
T 3kea_A 185 TSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDIN 220 (285)
T ss_dssp HHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBC
T ss_pred CCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCC
Confidence 6666666666665 6666666666666666666665
No 35
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=2.9e-34 Score=276.18 Aligned_cols=210 Identities=30% Similarity=0.394 Sum_probs=176.2
Q ss_pred CccchhhhhhcCCCCcccccccc--cccccccc----CCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccC--
Q psy14474 92 DQFVIPVEKVLSPLDPLSKWRDH--EACWQMQY----RGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEG-- 163 (550)
Q Consensus 92 ~~~~~~~~~~~~~~d~~~~l~~~--~~~~~~~~----~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~-- 163 (550)
+.++++.|+..|+.+.++.+++. ....+++. +|..|.||||+|+.....|+.+++++|+++ |++++..
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~----g~~~~~~~~ 77 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQI----DKDSGNPKP 77 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHH----HHHTTCSSC
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhc----CCcccchhh
Confidence 45678999999999887766642 22335787 899999999999977333666999999999 4444322
Q ss_pred --------CCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHh
Q psy14474 164 --------EEYLGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAAC 235 (550)
Q Consensus 164 --------~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~ 235 (550)
.+..|.||||+|+..|+.++|++|+++|++++.++..... ..+.+..|..|.||||+|+.
T Consensus 78 ~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~------------~~~~~~~~~~g~tpL~~A~~ 145 (256)
T 2etb_A 78 LVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFF------------QKHQGTCFYFGELPLSLAAC 145 (256)
T ss_dssp GGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGG------------SCCSSSCCCSCSSHHHHHHH
T ss_pred hcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccc------------cccccccccCCCCHHHHHHH
Confidence 2357999999999999999999999999999988742110 11223334569999999999
Q ss_pred cCCHHHHHHHHH---CCCCCCCcCCCCChHHHHHHH--CCCHH-------HHHHHHhCCCCCCCC-------CCCCCCCC
Q psy14474 236 CSNESVYNLLID---SGAIPDAKDSFGNMILHMVVV--NDKLD-------MFGYALRHPKTPASN-------GILNNDGF 296 (550)
Q Consensus 236 ~g~~~~v~~Ll~---~ga~i~~~d~~g~tpLh~A~~--~g~~~-------~v~~Ll~~g~~~~~~-------~~~~~~g~ 296 (550)
.|+.+++++|++ +|++++.+|..|+||||+|+. .++.+ ++++|+++| +++ +.+|..|.
T Consensus 146 ~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~g---a~~~~~~~~~~~~d~~g~ 222 (256)
T 2etb_A 146 TKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMG---ARLCPTVQLEEISNHQGL 222 (256)
T ss_dssp TTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH---HHHSTTCCGGGCCCTTSC
T ss_pred cCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcC---CCcccccccccccCCCCC
Confidence 999999999999 999999999999999999999 88888 999999999 888 89999999
Q ss_pred CHHHHHHHcCCHHHHHHHHhcccc
Q psy14474 297 TPLTLSCQLGRADVFREMLELSCK 320 (550)
Q Consensus 297 tpL~~A~~~g~~~~~~~Ll~~g~~ 320 (550)
||||+|+..|+.+++++|+++|++
T Consensus 223 tpL~~A~~~g~~~~v~~Ll~~g~~ 246 (256)
T 2etb_A 223 TPLKLAAKEGKIEIFRHILQREFS 246 (256)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHhCCHHHHHHHHhCCCC
Confidence 999999999999999999999987
No 36
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=6.8e-33 Score=263.21 Aligned_cols=228 Identities=19% Similarity=0.135 Sum_probs=197.6
Q ss_pred CCCccchhhhhhcCCCCccccccccccccccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCC
Q psy14474 90 DSDQFVIPVEKVLSPLDPLSKWRDHEACWQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGA 169 (550)
Q Consensus 90 ~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~ 169 (550)
+.+.++++.|+..|+.+.++.+++.+. +++.+|..|.||||+|+.. |+.+++++|+++ |.+++...+..|.
T Consensus 7 ~~~~~~l~~A~~~g~~~~~~~Ll~~g~--~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~----~~~~~~~~~~~~~ 77 (240)
T 3eu9_A 7 DYSTWDIVKATQYGIYERCRELVEAGY--DVRQPDKENVTLLHWAAIN---NRIDLVKYYISK----GAIVDQLGGDLNS 77 (240)
T ss_dssp CGGGCCHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHHHT---TCHHHHHHHHHT----TCCTTCCBTTTTB
T ss_pred cccchHHHHHHHcCChHHHHHHHHcCC--CcCCCCCCCCCHHHHHHHh---CCHHHHHHHHHc----CCcchhhcCCcCC
Confidence 345677899999999999999998775 4889999999999999965 556999999999 6666766666799
Q ss_pred cHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCC
Q psy14474 170 SALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSG 249 (550)
Q Consensus 170 tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g 249 (550)
||||+|+..|+.+++++|+++|++++.++ ..|.||||+|+..|+.+++++|+++|
T Consensus 78 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-------------------------~~g~t~l~~A~~~~~~~~~~~Ll~~~ 132 (240)
T 3eu9_A 78 TPLHWATRQGHLSMVVQLMKYGADPSLID-------------------------GEGCSCIHLAAQFGHTSIVAYLIAKG 132 (240)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCCC-------------------------TTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred ChhHHHHHcCCHHHHHHHHHcCCCCcccC-------------------------CCCCCHHHHHHHcCHHHHHHHHHhcC
Confidence 99999999999999999999999998776 68999999999999999999999999
Q ss_pred CCCCCcCCCCChHHHHHHHCCC-HHHHHHHHhCCCCCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHhcccccccccCc
Q psy14474 250 AIPDAKDSFGNMILHMVVVNDK-LDMFGYALRHPKTPASNGILNN-DGFTPLTLSCQLGRADVFREMLELSCKEFWRYSN 327 (550)
Q Consensus 250 a~i~~~d~~g~tpLh~A~~~g~-~~~v~~Ll~~g~~~~~~~~~~~-~g~tpL~~A~~~g~~~~~~~Ll~~g~~~~~~~~~ 327 (550)
++++.+|..|.||||+|+..++ .+++++|++.| ++++..+. .|.||||+|+..|+.+++++|+++|++
T Consensus 133 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~---~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------- 202 (240)
T 3eu9_A 133 QDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFN---VSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGAN------- 202 (240)
T ss_dssp CCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTT---CCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCC-------
T ss_pred CCccccCCCCCcHHHHHHHhCChHHHHHHHHhcC---CCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCC-------
Confidence 9999999999999999996666 89999999999 89999997 999999999999999999999999998
Q ss_pred ccccCCCCCcccccCcCCCCchhhHHHHHHhCCchhhhhhcchHHHHHHHHHHHHH
Q psy14474 328 ITCSAYPLNALDTLLPDGRTNWNSALFIILNGTKEAHLDMLDGGIIQRLLEEKWKT 383 (550)
Q Consensus 328 ~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~v~~ll~~k~~~ 383 (550)
++..+..|.||++.|. ..|.. ++++.|++.+.+.
T Consensus 203 ----------~~~~~~~g~t~l~~A~---~~~~~---------~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 203 ----------VDAQNIKGESALDLAK---QRKNV---------WMINHLQEARQAK 236 (240)
T ss_dssp ----------TTCBCTTSCBHHHHHH---HTTCH---------HHHHHHHHHC---
T ss_pred ----------CCCcCCCCCCHHHHHH---HcCcH---------HHHHHHHHhhhcc
Confidence 6666677877777663 22222 5788898887654
No 37
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=8.7e-34 Score=275.61 Aligned_cols=217 Identities=29% Similarity=0.325 Sum_probs=179.6
Q ss_pred cCCCccchhhhhhcCCCCcccccccccc--ccccc----cCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCC------
Q psy14474 89 RDSDQFVIPVEKVLSPLDPLSKWRDHEA--CWQMQ----YRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRL------ 156 (550)
Q Consensus 89 ~~~~~~~~~~~~~~~~~d~~~~l~~~~~--~~~~~----~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~------ 156 (550)
...+.++++.|+..|+.+.++.+++... ..+++ .+|..|.||||+|+.+...|+.+++++|+++|++.
T Consensus 10 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~ 89 (273)
T 2pnn_A 10 RLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQF 89 (273)
T ss_dssp -CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHH
T ss_pred CcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHH
Confidence 3456788999999999999999987432 22233 45889999999999874557779999999995331
Q ss_pred -CCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHh
Q psy14474 157 -SQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAAC 235 (550)
Q Consensus 157 -~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~ 235 (550)
+.++.. .+..|.||||+|+..|+.++|++|+++|++++.++.+.... ..+.+..+..|.||||+|+.
T Consensus 90 i~~~~~~-~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~-----------~~~~~~~~~~g~tpL~~A~~ 157 (273)
T 2pnn_A 90 VNASYTD-SYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFK-----------KTKGRPGFYFGELPLSLAAC 157 (273)
T ss_dssp HTCCCCS-TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGS-----------SCSSSCCCCSCBSHHHHHHH
T ss_pred hhccccc-ccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccc-----------cccccccccCCCCHHHHHHH
Confidence 111111 23589999999999999999999999999999887532111 11334455689999999999
Q ss_pred cCCHHHHHHHHH---CCCCCCCcCCCCChHHHHHHHCCC---------HHHHHHHHhCCCCCCCCC-------CCCCCCC
Q psy14474 236 CSNESVYNLLID---SGAIPDAKDSFGNMILHMVVVNDK---------LDMFGYALRHPKTPASNG-------ILNNDGF 296 (550)
Q Consensus 236 ~g~~~~v~~Ll~---~ga~i~~~d~~g~tpLh~A~~~g~---------~~~v~~Ll~~g~~~~~~~-------~~~~~g~ 296 (550)
.|+.+++++|++ +|++++.+|..|+||||+|+..|+ .+++++|+++| ++++ .+|..|.
T Consensus 158 ~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~g---a~~n~~~~~~~~~d~~g~ 234 (273)
T 2pnn_A 158 TNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILG---AKLHPTLKLEEITNRKGL 234 (273)
T ss_dssp TTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH---HHHCTTCCGGGCCCTTSC
T ss_pred cCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhh---hhcccccccccccCCCCC
Confidence 999999999999 999999999999999999999988 89999999999 7876 5899999
Q ss_pred CHHHHHHHcCCHHHHHHHHhcccc
Q psy14474 297 TPLTLSCQLGRADVFREMLELSCK 320 (550)
Q Consensus 297 tpL~~A~~~g~~~~~~~Ll~~g~~ 320 (550)
||||+|+..|+.+++++|+++|++
T Consensus 235 TpL~~A~~~g~~~iv~~Ll~~ga~ 258 (273)
T 2pnn_A 235 TPLALAASSGKIGVLAYILQREIH 258 (273)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred CHHHHHHHhChHHHHHHHHHCCCC
Confidence 999999999999999999999994
No 38
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=6.3e-33 Score=279.10 Aligned_cols=224 Identities=20% Similarity=0.145 Sum_probs=190.6
Q ss_pred ccCCcchHHHHHhcChHHHHHHHHHhhccccccCCCCCccchHHHhhhhccCCCccchhhhhhcCCCCcccccccccccc
Q psy14474 39 YKNGGELVDAYNIGGQVEVEKLIKEQFGVLMYNDGTGQVIDKTEYLKWRYRDSDQFVIPVEKVLSPLDPLSKWRDHEACW 118 (550)
Q Consensus 39 ~~~~~~ll~~a~~~g~~~~~k~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~ 118 (550)
...|.||||.|+..|+.+++++|.+++......+. .+.+++++|+..|+.++++.+++.+..
T Consensus 55 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-----------------~g~t~L~~A~~~g~~~iv~~Ll~~g~~- 116 (351)
T 3utm_A 55 DGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDK-----------------GGLVPLHNACSYGHYEVTELLLKHGAC- 116 (351)
T ss_dssp STTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-----------------TCCCHHHHHHHTTCHHHHHHHHHTTCC-
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC-----------------CCCcHHHHHHHCCCHHHHHHHHHCCCC-
Confidence 34689999999999999999999997654433333 345668999999999999999988755
Q ss_pred ccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccC-----------------------------------
Q psy14474 119 QMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEG----------------------------------- 163 (550)
Q Consensus 119 ~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~----------------------------------- 163 (550)
++.+|..|.||||+|+.. |+.+++++|+++|+ +++..
T Consensus 117 -~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~----~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~ 188 (351)
T 3utm_A 117 -VNAMDLWQFTPLHEAASK---NRVEVCSLLLSHGA----DPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAARE 188 (351)
T ss_dssp -TTCCCTTCCCHHHHHHHT---TCHHHHHHHHHTTC----CTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -CCCCCCCCCCHHHHHHHc---CCHHHHHHHHHcCC----CCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHh
Confidence 889999999999999964 55699999999954 43321
Q ss_pred ------------------CCCCCCcHHHHHHHh---CCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCC
Q psy14474 164 ------------------EEYLGASALHLAIAY---ANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGL 222 (550)
Q Consensus 164 ------------------~~~~g~tpLh~A~~~---g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 222 (550)
.+..|.||||+|+.. +..+++++|+++|++++.++
T Consensus 189 ~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~------------------------ 244 (351)
T 3utm_A 189 ADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKN------------------------ 244 (351)
T ss_dssp TCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCC------------------------
T ss_pred ccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcC------------------------
Confidence 234678888888888 44788888888888887765
Q ss_pred CCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHH
Q psy14474 223 AYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLS 302 (550)
Q Consensus 223 ~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A 302 (550)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+|+|
T Consensus 245 -~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g---ad~~~~~~~g~tal~~a 320 (351)
T 3utm_A 245 -KDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYG---SDPSIISLQGFTAAQMG 320 (351)
T ss_dssp -TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHS
T ss_pred -CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcC---CCCCCcCCCCCChhhhh
Confidence 68999999999999999999999999999999999999999999999999999999999 99999999999999997
Q ss_pred HHcCCHHHHHHHHhcccc
Q psy14474 303 CQLGRADVFREMLELSCK 320 (550)
Q Consensus 303 ~~~g~~~~~~~Ll~~g~~ 320 (550)
+.+++++|.+.+..
T Consensus 321 ----~~~~~~~l~~~~~~ 334 (351)
T 3utm_A 321 ----NEAVQQILSESTPM 334 (351)
T ss_dssp ----CHHHHHHHHHC---
T ss_pred ----hHHHHHHHHhcccc
Confidence 67888999887764
No 39
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=4.6e-33 Score=257.36 Aligned_cols=192 Identities=17% Similarity=0.181 Sum_probs=174.5
Q ss_pred CCCccchhhhhhcCCCCccccccccccccccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCC
Q psy14474 90 DSDQFVIPVEKVLSPLDPLSKWRDHEACWQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGA 169 (550)
Q Consensus 90 ~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~ 169 (550)
+.+.++++.|+..|+.+.++.++..... +++.+|.+|.||||+|+.. |+.+++++|+++ |++++..+ ..|.
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~-~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~----g~~~~~~~-~~g~ 73 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTY-QVDEVDTEGNTPLNIAVHN---NDIEIAKALIDR----GADINLQN-SISD 73 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTC-CTTCCCTTSCCHHHHHHHH---TCHHHHHHHHHT----TCCTTCCC-TTSC
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCC-CCCCCCCCCCCHHHHHHHc---CCHHHHHHHHHc----CCCCCCCC-CCCC
Confidence 4566788999999999999999876653 5899999999999999965 556999999999 77777665 4899
Q ss_pred cHHHHHHHhCCHHHHHHHHH-cCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHC
Q psy14474 170 SALHLAIAYANNELVADLIE-AGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDS 248 (550)
Q Consensus 170 tpLh~A~~~g~~~~v~~Ll~-~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ 248 (550)
||||+|+..|+.+++++|++ .+++++.++ ..|.||||+|+..|+.+++++|+++
T Consensus 74 t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~-------------------------~~g~t~L~~A~~~~~~~~v~~Ll~~ 128 (201)
T 3hra_A 74 SPYLYAGAQGRTEILAYMLKHATPDLNKHN-------------------------RYGGNALIPAAEKGHIDNVKLLLED 128 (201)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHSCCCTTCCC-------------------------TTSCCSHHHHHHTTCHHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhccCccccccc-------------------------CCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 99999999999999999995 567777765 6899999999999999999999999
Q ss_pred C-CCCCCcCCCCChHHHHHHHCCC-----HHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcc
Q psy14474 249 G-AIPDAKDSFGNMILHMVVVNDK-----LDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELS 318 (550)
Q Consensus 249 g-a~i~~~d~~g~tpLh~A~~~g~-----~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g 318 (550)
| ++++.+|..|.||||+|+..++ .+++++|+++| ++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 129 g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~g---a~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 129 GREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENG---ADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp CCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred CCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCC---CCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 9 9999999999999999999998 99999999999 999999999999999999999999999999987
No 40
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=6.9e-34 Score=278.03 Aligned_cols=217 Identities=10% Similarity=0.011 Sum_probs=192.6
Q ss_pred ccCCcchHHHHHhcChHHHHHHHHHhhccccccCCCCCccchHHHhhhhccCCCccchhhhhhcCCCCcccccccccccc
Q psy14474 39 YKNGGELVDAYNIGGQVEVEKLIKEQFGVLMYNDGTGQVIDKTEYLKWRYRDSDQFVIPVEKVLSPLDPLSKWRDHEACW 118 (550)
Q Consensus 39 ~~~~~~ll~~a~~~g~~~~~k~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~ 118 (550)
...|.||||.|+..|+.+++++|++.+...... .+.+++++|+..|+.++++.+++.+..
T Consensus 28 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~-------------------~g~t~L~~A~~~g~~~~v~~Ll~~ga~- 87 (285)
T 3kea_A 28 DVHGHSASYYAIADNNVRLVCTLLNAGALKNLL-------------------ENEFPLHQAATLEDTKIVKILLFSGLD- 87 (285)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC-------------------TTCCHHHHHTTSSSCHHHHHHHHTTCC-
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC-------------------CCCCHHHHHHHcCCHHHHHHHHHCCCC-
Confidence 457999999999999999999999875443222 145668999999999999999988654
Q ss_pred ccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCC-CcHHHHHHHhCCHHHHHHHHHcCCCCCcc
Q psy14474 119 QMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLG-ASALHLAIAYANNELVADLIEAGANVTQR 197 (550)
Q Consensus 119 ~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g-~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~ 197 (550)
++.+|..|.||||+|+.. |+.+++++|+++ |++++..+. .| .||||+|+..|+.+++++|+++|++....
T Consensus 88 -~~~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~----ga~~~~~~~-~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 158 (285)
T 3kea_A 88 -DSQFDDKGNTALYYAVDS---GNMQTVKLFVKK----NWRLMFYGK-TGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL 158 (285)
T ss_dssp -TTCCCTTSCCHHHHHHHT---TCHHHHHHHHHH----CGGGGGCSS-SGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC
T ss_pred -CCCcCCCCCcHHHHHHHc---CCHHHHHHHHhc----CCCCCccCC-CCCCCHHHHHHHcCCHHHHHHHHhCCCccccc
Confidence 889999999999999964 566999999999 888887665 67 89999999999999999999999876432
Q ss_pred ccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChH-HHHHHHCCCHHHHH
Q psy14474 198 AIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMI-LHMVVVNDKLDMFG 276 (550)
Q Consensus 198 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tp-Lh~A~~~g~~~~v~ 276 (550)
..|.||||+|+..|+.+++++|+++|++++.+|..|.|| ||+|+..|+.++++
T Consensus 159 --------------------------~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~ 212 (285)
T 3kea_A 159 --------------------------AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQ 212 (285)
T ss_dssp --------------------------STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHH
T ss_pred --------------------------cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHH
Confidence 278999999999999999999999999999999999998 99999999999999
Q ss_pred HHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Q psy14474 277 YALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCK 320 (550)
Q Consensus 277 ~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~ 320 (550)
+|+++| ++++.+|. .|+..|+.+++++|+++|++
T Consensus 213 ~Ll~~g---ad~~~~~~-------~a~~~~~~~iv~~Ll~~g~~ 246 (285)
T 3kea_A 213 ALFKYD---INIYSANL-------ENVLLDDAEIAKMIIEKHVE 246 (285)
T ss_dssp HHTTSC---BCSTTTTG-------GGGTTTCHHHHHHHHHHHHH
T ss_pred HHHHcC---CCCCCCCh-------hhhhcCCHHHHHHHHHcCCC
Confidence 999999 88888883 56889999999999999998
No 41
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=6.1e-33 Score=267.81 Aligned_cols=207 Identities=19% Similarity=0.104 Sum_probs=178.1
Q ss_pred chhHHHHHhhcCCCchhhHHhhhhccCCcchHHHHHhcChHHHHHHHHHhhccccccCCCCCccchHHHhhhhccCCCcc
Q psy14474 15 GSVLDRVISQASNEDDCLLYRLANYKNGGELVDAYNIGGQVEVEKLIKEQFGVLMYNDGTGQVIDKTEYLKWRYRDSDQF 94 (550)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a~~~g~~~~~k~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 94 (550)
.++++..++.+.+.+. ....|.||||.|+..|+.+++++|.+.+
T Consensus 16 ~~~v~~Ll~~g~~~~~-------~~~~g~t~L~~A~~~g~~~~v~~Ll~~g----------------------------- 59 (261)
T 2xai_A 16 QLSLRNLISQGWAVNI-------ITADHVSPLHEACLGGHLSCVKILLKHG----------------------------- 59 (261)
T ss_dssp HHHHHHHHHTTCCSSC-------CCTTCCCHHHHHHHHTCHHHHHHHHHTT-----------------------------
T ss_pred HHHHHHHHHCCCCCCC-------cCCCCCCHHHHHHHcCCHHHHHHHHHCC-----------------------------
Confidence 3455556665554432 3457999999999999999999999741
Q ss_pred chhhhhhcCCCCccccccccccccccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHH
Q psy14474 95 VIPVEKVLSPLDPLSKWRDHEACWQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHL 174 (550)
Q Consensus 95 ~~~~~~~~~~~d~~~~l~~~~~~~~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~ 174 (550)
.+++.+|.+|.||||+|+.. |+.+++++|+++ |++++.. ..|.||||+
T Consensus 60 -----------------------~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~----g~~~~~~--~~g~t~L~~ 107 (261)
T 2xai_A 60 -----------------------AQVNGVTADWHTPLFNACVS---GSWDCVNLLLQH----GASVQPE--SDLASPIHE 107 (261)
T ss_dssp -----------------------CCTTCCCTTSCCHHHHHHHH---TCHHHHHHHHHT----TCCSSCS--CTTCCHHHH
T ss_pred -----------------------CCCCCCCCCCCCHHHHHHHc---CCHHHHHHHHHC----CCCCCCC--CCCCCHHHH
Confidence 12577889999999999965 456999999999 6666543 369999999
Q ss_pred HHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCC
Q psy14474 175 AIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDA 254 (550)
Q Consensus 175 A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~ 254 (550)
|+..|+.+++++|+++|++++.++ ..|.||||+|+..|+.+++++|+++|++++.
T Consensus 108 A~~~~~~~~v~~Ll~~g~~~~~~~-------------------------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 162 (261)
T 2xai_A 108 AARRGHVECVNSLIAYGGNIDHKI-------------------------SHLGTPLYLACENQQRACVKKLLESGADVNQ 162 (261)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCB-------------------------TTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC
T ss_pred HHHcCcHHHHHHHHHcCCCCCcCC-------------------------CCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 999999999999999999998876 6899999999999999999999999999996
Q ss_pred cCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Q psy14474 255 KDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCK 320 (550)
Q Consensus 255 ~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~ 320 (550)
|..|.||||+|+..|+.+++++|+++| ++++.+|.+|+||||+|+.++ ++++.|++++..
T Consensus 163 -~~~g~t~Lh~A~~~~~~~~v~~Ll~~g---ad~~~~d~~g~tpl~~A~~~~--~~~~~ll~~~~~ 222 (261)
T 2xai_A 163 -GKGQDSPLHAVARTASEELACLLMDFG---ADTQAKNAEGKRPVELVPPES--PLAQLFLEREGP 222 (261)
T ss_dssp -CBTTBCHHHHHHHHTCHHHHHHHHHTT---CCTTCCCTTSCCGGGGSCTTC--THHHHHHHC-CC
T ss_pred -CCCCCChHHHHHHcCCHHHHHHHHHcC---CCCCCcCCCCCChhhhccccc--cHHHHHHhccCC
Confidence 889999999999999999999999999 999999999999999999654 589999998775
No 42
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=8.4e-34 Score=279.36 Aligned_cols=207 Identities=20% Similarity=0.280 Sum_probs=182.9
Q ss_pred CCccchhhhhhcCCCCccccccccccccccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCc
Q psy14474 91 SDQFVIPVEKVLSPLDPLSKWRDHEACWQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGAS 170 (550)
Q Consensus 91 ~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~t 170 (550)
.+.++++.|+..|+.+.++.+++.+. ++|.+|..|.||||+|+.. |+.+++++|+++ |++++..+. .|.|
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~----ga~~~~~~~-~g~t 108 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLERGA--DINYANVDGLTALHQACID---DNVDMVKFLVEN----GANINQPDN-EGWI 108 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHCC--CTTCBCTTCCBHHHHHHHT---TCHHHHHHHHHT----TCCTTCCCT-TSCC
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCC--CCcccCCCCCCHHHHHHHc---CCHHHHHHHHHC----CCCCCCCCC-CCCc
Confidence 45677999999999999999998765 4899999999999999964 566999999999 778777654 8999
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHH-CC
Q psy14474 171 ALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLID-SG 249 (550)
Q Consensus 171 pLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~-~g 249 (550)
|||+|+..|+.++|++|+++|++++.++ ..|.||||+|+..++.++++.++. .|
T Consensus 109 pL~~A~~~g~~~~v~~Ll~~g~~~~~~~-------------------------~~g~t~l~~A~~~~~~~~~~~ll~~~~ 163 (299)
T 1s70_B 109 PLHAAASCGYLDIAEYLISQGAHVGAVN-------------------------SEGDTPLDIAEEEAMEELLQNEVNRQG 163 (299)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCC-------------------------TTSCCHHHHCCSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCCcC-------------------------CCCCCHHHHHHhcchHHHHHHHHhhcC
Confidence 9999999999999999999999998776 689999999999999999988775 34
Q ss_pred CCCC--------------------------CcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHH
Q psy14474 250 AIPD--------------------------AKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSC 303 (550)
Q Consensus 250 a~i~--------------------------~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~ 303 (550)
++++ ..+..|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g---~d~~~~d~~g~tpL~~A~ 240 (299)
T 1s70_B 164 VDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR---YDVNIKDYDGWTPLHAAA 240 (299)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTT---CCTTCCCTTCCCHHHHHH
T ss_pred CCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcC---CCCCCcCCCCCcHHHHHH
Confidence 4433 35678999999999999999999999999 999999999999999999
Q ss_pred HcCCHHHHHHHHhcccccccccCcccccCCCCCcccccCcCCCCchhhH
Q psy14474 304 QLGRADVFREMLELSCKEFWRYSNITCSAYPLNALDTLLPDGRTNWNSA 352 (550)
Q Consensus 304 ~~g~~~~~~~Ll~~g~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~~~ 352 (550)
..|+.+++++|+++|++ ++..+..|+||++.+
T Consensus 241 ~~~~~~~v~~Ll~~gad-----------------~~~~d~~g~t~l~~A 272 (299)
T 1s70_B 241 HWGKEEACRILVENLCD-----------------MEAVNKVGQTAFDVA 272 (299)
T ss_dssp HTTCHHHHHHHHHTTCC-----------------TTCCCTTSCCTTTSC
T ss_pred hcCCHHHHHHHHHcCCC-----------------CCCcCCCCCCHHHHH
Confidence 99999999999999998 677777888877766
No 43
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=5.8e-32 Score=255.96 Aligned_cols=208 Identities=20% Similarity=0.185 Sum_probs=169.5
Q ss_pred CCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCcccccccccc
Q psy14474 126 LGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLP 205 (550)
Q Consensus 126 ~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~ 205 (550)
.|+||||+|+.. |+.+++++|++.. |++++..+ ..|.||||+|+..|+.+++++|+++|+++....
T Consensus 2 ~g~t~L~~A~~~---g~~~~v~~Ll~~~---g~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~------- 67 (232)
T 2rfa_A 2 IWESPLLLAAKE---NDVQALSKLLKFE---GCEVHQRG-AMGETALHIAALYDNLEAAMVLMEAAPELVFEP------- 67 (232)
T ss_dssp CTTCHHHHHHHT---TCHHHHHHHHTTT---CSCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCC-------
T ss_pred CCCCHHHHHHHc---CCHHHHHHHHHhc---CCCcccCC-CCCCCHHHHHHHcCCHHHHHHHHHcCchhcccc-------
Confidence 589999999965 5569999999973 66777665 489999999999999999999999998864321
Q ss_pred ccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCC-------------CCChHHHHHHHCCCH
Q psy14474 206 RDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDS-------------FGNMILHMVVVNDKL 272 (550)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~-------------~g~tpLh~A~~~g~~ 272 (550)
.+.+|..|.||||+|+..|+.+++++|+++|++++.++. .|.||||+|+..|+.
T Consensus 68 -------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~ 134 (232)
T 2rfa_A 68 -------------MTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSE 134 (232)
T ss_dssp -------------CCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCH
T ss_pred -------------ccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCH
Confidence 234457899999999999999999999999999999876 799999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHH----HHHHhcccccccccCcccccCCCCCcccccCcCCCCc
Q psy14474 273 DMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVF----REMLELSCKEFWRYSNITCSAYPLNALDTLLPDGRTN 348 (550)
Q Consensus 273 ~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~----~~Ll~~g~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~ 348 (550)
+++++|+++| ++++.+|..|.||||+|+..|+.+++ ++|+++|++.... ...+..+..|.||
T Consensus 135 ~~v~~Ll~~g---a~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~-----------~~~~~~~~~g~tp 200 (232)
T 2rfa_A 135 EIVRLLIEHG---ADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLK-----------SLELVPNNQGLTP 200 (232)
T ss_dssp HHHHHHHHTT---CCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSC-----------CGGGCCCTTSCCH
T ss_pred HHHHHHHHCC---CCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhh-----------hhhccCCCCCCCH
Confidence 9999999999 99999999999999999999999988 9999999972100 0013445567666
Q ss_pred hhhHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHHHH
Q psy14474 349 WNSALFIILNGTKEAHLDMLDGGIIQRLLEEKWKTFAQ 386 (550)
Q Consensus 349 ~~~~~~~~~~g~~~~~~~~~~~~~v~~ll~~k~~~~~~ 386 (550)
++.|. ..|. .++++.|+++|.+....
T Consensus 201 l~~A~---~~g~---------~~~v~~Ll~~g~~~~~~ 226 (232)
T 2rfa_A 201 FKLAG---VEGN---------IVMFQHLMQKRKHIAAA 226 (232)
T ss_dssp HHHHH---HHTC---------HHHHHHHHHHHHHC---
T ss_pred HHHHH---HcCC---------HHHHHHHHhcCccchhh
Confidence 66553 2222 25899999998765443
No 44
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.1e-33 Score=268.54 Aligned_cols=200 Identities=21% Similarity=0.246 Sum_probs=168.6
Q ss_pred ccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccc
Q psy14474 121 QYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIG 200 (550)
Q Consensus 121 ~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g 200 (550)
+.+|.+|.||||+|+..+.. +++++|++.++..+++++..+. .|.||||+|+..|+.++|++|+++|++++.++
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~---~~v~~Ll~~~~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-- 75 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEK---ALTMEVIRQVKGDLAFLNFQNN-LQQTPLHLAVITNQPEIAEALLGAGCDPELRD-- 75 (236)
T ss_dssp -----CCCCTTHHHHHTTCS---SSSSCCCC-----CCCCCCCCT-TCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCC--
T ss_pred CcCCCCCCchhHHHHHcCCh---hHHHHHHHHhhccHHHhhccCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC--
Confidence 46789999999999976655 9999999997766677877654 89999999999999999999999999998876
Q ss_pred cccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCC------CCCcCCCCChHHHHHHHCCCHHH
Q psy14474 201 SFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAI------PDAKDSFGNMILHMVVVNDKLDM 274 (550)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~------i~~~d~~g~tpLh~A~~~g~~~~ 274 (550)
..|.||||+|+..|+.+++++|+++|++ ++..|..|.||||+|+..|+.++
T Consensus 76 -----------------------~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 132 (236)
T 1ikn_D 76 -----------------------FRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGI 132 (236)
T ss_dssp -----------------------TTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHH
T ss_pred -----------------------CCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHH
Confidence 6899999999999999999999999976 56788899999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHhcccccccccCcccccCCCCCcccccCcCCCCchhhHH
Q psy14474 275 FGYALRHPKTPASNGILNN-DGFTPLTLSCQLGRADVFREMLELSCKEFWRYSNITCSAYPLNALDTLLPDGRTNWNSAL 353 (550)
Q Consensus 275 v~~Ll~~g~~~~~~~~~~~-~g~tpL~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~ 353 (550)
+++|+++| ++++.++. .|.||||+|+..|+.+++++|+++|++ ++..+..|.||++.+
T Consensus 133 v~~Ll~~g---~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-----------------~~~~~~~g~tpl~~A- 191 (236)
T 1ikn_D 133 VELLVSLG---ADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGAD-----------------VNRVTYQGYSPYQLT- 191 (236)
T ss_dssp HHHHHHHT---CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCC-----------------SCCCCTTCCCGGGGC-
T ss_pred HHHHHHcC---CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----------------CCcccCCCCCHHHHH-
Confidence 99999999 99999998 999999999999999999999999998 666666777666555
Q ss_pred HHHHhCCchhhhhhcch--HHHHHHHHHHHHH
Q psy14474 354 FIILNGTKEAHLDMLDG--GIIQRLLEEKWKT 383 (550)
Q Consensus 354 ~~~~~g~~~~~~~~~~~--~~v~~ll~~k~~~ 383 (550)
+..+ ++++.|+++|++.
T Consensus 192 -------------~~~~~~~~~~~Ll~~ga~~ 210 (236)
T 1ikn_D 192 -------------WGRPSTRIQQQLGQLTLEN 210 (236)
T ss_dssp -------------TTSSCHHHHHHHHTTSCGG
T ss_pred -------------HccCchHHHHHHHHcchhh
Confidence 3322 5788999888654
No 45
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=2e-34 Score=283.87 Aligned_cols=246 Identities=18% Similarity=0.112 Sum_probs=195.3
Q ss_pred CCcchHHHHHhcChHHHHHHHHHhhccccccCCCCCccchHHHhhhhccCCCccchhhhhhcCCCCcccccccccccccc
Q psy14474 41 NGGELVDAYNIGGQVEVEKLIKEQFGVLMYNDGTGQVIDKTEYLKWRYRDSDQFVIPVEKVLSPLDPLSKWRDHEACWQM 120 (550)
Q Consensus 41 ~~~~ll~~a~~~g~~~~~k~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~ 120 (550)
.|.|+|+.||..|+.+++++|++.+......+. .+.+++|+|+..|+.++++.|++.+.. +
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~-----------------~g~t~L~~A~~~g~~~~v~~Ll~~ga~--~ 99 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLERGADINYANV-----------------DGLTALHQACIDDNVDMVKFLVENGAN--I 99 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCT-----------------TCCBHHHHHHHTTCHHHHHHHHHTTCC--T
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCCcccCC-----------------CCCCHHHHHHHcCCHHHHHHHHHCCCC--C
Confidence 578999999999999999999987654433333 345668999999999999999987654 8
Q ss_pred ccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHc-CCCCCcccc
Q psy14474 121 QYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEA-GANVTQRAI 199 (550)
Q Consensus 121 ~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~-ga~~~~~~~ 199 (550)
+.+|..|.||||+|+.. |+.+++++|+++ |++++..+ ..|.||||+|+..|+.++++.++.. |.+++..+.
T Consensus 100 ~~~~~~g~tpL~~A~~~---g~~~~v~~Ll~~----g~~~~~~~-~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~ 171 (299)
T 1s70_B 100 NQPDNEGWIPLHAAASC---GYLDIAEYLISQ----GAHVGAVN-SEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARK 171 (299)
T ss_dssp TCCCTTSCCHHHHHHHH---TCHHHHHHHHHT----TCCTTCCC-TTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHH
T ss_pred CCCCCCCCcHHHHHHHc---CCHHHHHHHHhC----CCCCCCcC-CCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhh
Confidence 99999999999999965 566999999999 67776665 4899999999999999999998865 777664332
Q ss_pred -ccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHH
Q psy14474 200 -GSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYA 278 (550)
Q Consensus 200 -g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~L 278 (550)
+.................+....+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|
T Consensus 172 ~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~L 251 (299)
T 1s70_B 172 EEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRIL 251 (299)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred hhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHH
Confidence 1111100000000001112233457899999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhc
Q psy14474 279 LRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLEL 317 (550)
Q Consensus 279 l~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~ 317 (550)
+++| ++++.+|..|.||||+|++.. .+.++.+++.
T Consensus 252 l~~g---ad~~~~d~~g~t~l~~A~~~~-~~~l~~l~~~ 286 (299)
T 1s70_B 252 VENL---CDMEAVNKVGQTAFDVADEDI-LGYLEELQKK 286 (299)
T ss_dssp HHTT---CCTTCCCTTSCCTTTSCCSGG-GHHHHHHHHH
T ss_pred HHcC---CCCCCcCCCCCCHHHHHHHHH-HHHHHHHHHH
Confidence 9999 999999999999999997644 4555555544
No 46
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=3.2e-32 Score=249.99 Aligned_cols=164 Identities=20% Similarity=0.286 Sum_probs=153.7
Q ss_pred cccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCcccc
Q psy14474 120 MQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAI 199 (550)
Q Consensus 120 ~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~ 199 (550)
+|.+|..|.||||+|+..+.. +++++|+++ |++++..+ ..|.||||+|+..|+.+++++|+++|++++.++
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~---~~v~~Ll~~----~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~- 98 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGME---NAIDKLVEN----FDKLEDKD-IEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKD- 98 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCG---GGHHHHHHH----HCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCC-
T ss_pred HhCcCCCCCCHHHHHHHcCCH---HHHHHHHHh----cccccccc-ccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCC-
Confidence 688999999999999976555 999999999 66776655 489999999999999999999999999998776
Q ss_pred ccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHH
Q psy14474 200 GSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYAL 279 (550)
Q Consensus 200 g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll 279 (550)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+
T Consensus 99 ------------------------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 154 (192)
T 2rfm_A 99 ------------------------FSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLL 154 (192)
T ss_dssp ------------------------TTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred ------------------------CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccc
Q psy14474 280 RHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSC 319 (550)
Q Consensus 280 ~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~ 319 (550)
++| ++++.+|..|.||||+|+..|+.+++++|+++|.
T Consensus 155 ~~g---a~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~ 191 (192)
T 2rfm_A 155 ELG---ADISARDLTGLTAEASARIFGRQEVIKIFTEVRR 191 (192)
T ss_dssp HTT---CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HCC---CCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhccC
Confidence 999 9999999999999999999999999999999863
No 47
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=4e-33 Score=268.84 Aligned_cols=212 Identities=27% Similarity=0.384 Sum_probs=175.6
Q ss_pred CccchhhhhhcCCCCccccccc----cccccccccC----CCCCChHHHHHHHcCCcchHHHHHHHHHhCCCC-------
Q psy14474 92 DQFVIPVEKVLSPLDPLSKWRD----HEACWQMQYR----GSLGETLLHVLIICDTKLHTRLARTLLKCFPRL------- 156 (550)
Q Consensus 92 ~~~~~~~~~~~~~~d~~~~l~~----~~~~~~~~~~----d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~------- 156 (550)
+.++++.|+..|+.+.++.+++ .+.. ++.+ |..|.||||+|+.....|+.+++++|++.|++.
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~--~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~ 82 (260)
T 3jxi_A 5 NRPILFDIVSRGSPDGLEGLLSFLLTHKKR--LTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFI 82 (260)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCC--TTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHH
T ss_pred hHHHHHHHHHhCCHHHHHHHHHHHHhcCCC--cchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhh
Confidence 4566888999999998887776 4433 4544 478999999999543457779999999985331
Q ss_pred CCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhc
Q psy14474 157 SQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACC 236 (550)
Q Consensus 157 ~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~ 236 (550)
+.+++.. +..|.||||+|+..|+.++|++|+++|++++.++.+... ...+.+..+..|.||||+|+..
T Consensus 83 ~~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~-----------~~~~~~~~~~~g~tpL~~A~~~ 150 (260)
T 3jxi_A 83 NSPFRDV-YYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFF-----------QPKDEGGYFYFGELPLSLAACT 150 (260)
T ss_dssp TCCBCCS-SEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCC-----------SSSCCCCSCCSCSSHHHHHHHT
T ss_pred ccccccc-ccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcccccccc-----------CcccccccccCCCCHHHHHHHc
Confidence 1223332 247999999999999999999999999999988753211 1223344456899999999999
Q ss_pred CCHHHHHHHHH---CCCCCCCcCCCCChHHHHHHHCCC---------HHHHHHHHhCCCCCCCC-------CCCCCCCCC
Q psy14474 237 SNESVYNLLID---SGAIPDAKDSFGNMILHMVVVNDK---------LDMFGYALRHPKTPASN-------GILNNDGFT 297 (550)
Q Consensus 237 g~~~~v~~Ll~---~ga~i~~~d~~g~tpLh~A~~~g~---------~~~v~~Ll~~g~~~~~~-------~~~~~~g~t 297 (550)
|+.+++++|++ +|++++.+|..|+||||+|+..++ .+++++|+++| +++ +.+|..|.|
T Consensus 151 g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~g---a~~~~~~~~~~~~d~~g~t 227 (260)
T 3jxi_A 151 NQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKC---AKLFPDTNLEALLNNDGLS 227 (260)
T ss_dssp TCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHH---HHHCTTCCGGGCCCTTSCC
T ss_pred CCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhC---cccccccchhhcccCCCCC
Confidence 99999999999 999999999999999999998887 79999999999 777 679999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcccc
Q psy14474 298 PLTLSCQLGRADVFREMLELSCK 320 (550)
Q Consensus 298 pL~~A~~~g~~~~~~~Ll~~g~~ 320 (550)
|||+|++.|+.+++++|+++|++
T Consensus 228 pL~~A~~~g~~~~v~~Ll~~g~~ 250 (260)
T 3jxi_A 228 PLMMAAKTGKIGIFQHIIRREIA 250 (260)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHhCCC
Confidence 99999999999999999999987
No 48
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.98 E-value=8.4e-32 Score=258.97 Aligned_cols=215 Identities=17% Similarity=0.177 Sum_probs=171.0
Q ss_pred CCChHHHHHHHcCCcchHH----HHHHHHHhCCCCCCcccc---CCCCCCCcHHHHHHHh---CCHHHHHHHHHcCCCCC
Q psy14474 126 LGETLLHVLIICDTKLHTR----LARTLLKCFPRLSQDVVE---GEEYLGASALHLAIAY---ANNELVADLIEAGANVT 195 (550)
Q Consensus 126 ~g~t~Lh~A~~~~~~g~~~----~v~~Ll~~~~~~~~~i~~---~~~~~g~tpLh~A~~~---g~~~~v~~Ll~~ga~~~ 195 (550)
.|+||||.|+..+.. + ++++|++. |++++. ..+..|.||||+|+.. |+.++|++|+++|++++
T Consensus 1 ~G~t~L~~A~~~g~~---~~v~~ll~~l~~~----g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~ 73 (256)
T 2etb_A 1 FDRDRLFSVVSRGVP---EELTGLLEYLRWN----SKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSG 73 (256)
T ss_dssp CCHHHHHHHHHHTCG---GGGTTHHHHHHHH----TCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTT
T ss_pred CCccHHHHHHHcCCH---HHHHHHHHHHHHc----CCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCccc
Confidence 489999999976554 6 66777778 777776 3345899999999999 99999999999998877
Q ss_pred ccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCC-------------CChH
Q psy14474 196 QRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSF-------------GNMI 262 (550)
Q Consensus 196 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~-------------g~tp 262 (550)
..+. .-......+|..|.||||+|+..|+.+++++|+++|++++.+|.. |.||
T Consensus 74 ~~~~--------------~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tp 139 (256)
T 2etb_A 74 NPKP--------------LVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELP 139 (256)
T ss_dssp CSSC--------------GGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSH
T ss_pred chhh--------------hcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCH
Confidence 4431 000112234568999999999999999999999999999999986 9999
Q ss_pred HHHHHHCCCHHHHHHHHh---CCCCCCCCCCCCCCCCCHHHHHHH--cCCHH-------HHHHHHhcccccccccCcccc
Q psy14474 263 LHMVVVNDKLDMFGYALR---HPKTPASNGILNNDGFTPLTLSCQ--LGRAD-------VFREMLELSCKEFWRYSNITC 330 (550)
Q Consensus 263 Lh~A~~~g~~~~v~~Ll~---~g~~~~~~~~~~~~g~tpL~~A~~--~g~~~-------~~~~Ll~~g~~~~~~~~~~~~ 330 (550)
||+|+..|+.+++++|++ +| ++++.+|..|+||||+|+. .++.+ ++++|+++|++....
T Consensus 140 L~~A~~~~~~~~v~~Ll~~~~~g---a~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~------ 210 (256)
T 2etb_A 140 LSLAACTKQWDVVTYLLENPHQP---ASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPT------ 210 (256)
T ss_dssp HHHHHHTTCHHHHHHHHHCSSCC---CCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTT------
T ss_pred HHHHHHcCCHHHHHHHHhccccC---CCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccc------
Confidence 999999999999999999 78 9999999999999999999 88888 999999999981000
Q ss_pred cCCCCCcccccCcCCCCchhhHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHHHH
Q psy14474 331 SAYPLNALDTLLPDGRTNWNSALFIILNGTKEAHLDMLDGGIIQRLLEEKWKTFAQ 386 (550)
Q Consensus 331 ~~~~l~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~v~~ll~~k~~~~~~ 386 (550)
....+..+..|+||++.|. ..|. .++++.|+++|.+....
T Consensus 211 ----~~~~~~~d~~g~tpL~~A~---~~g~---------~~~v~~Ll~~g~~~~~~ 250 (256)
T 2etb_A 211 ----VQLEEISNHQGLTPLKLAA---KEGK---------IEIFRHILQREFSGAAA 250 (256)
T ss_dssp ----CCGGGCCCTTSCCHHHHHH---HTTC---------HHHHHHHHHHHHHHHHH
T ss_pred ----cccccccCCCCCCHHHHHH---HhCC---------HHHHHHHHhCCCCCCCc
Confidence 0001556667776666653 2222 25899999999776544
No 49
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.98 E-value=2.2e-32 Score=265.65 Aligned_cols=227 Identities=18% Similarity=0.230 Sum_probs=170.7
Q ss_pred cccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCcccc---CCCCCCCcHHHHHHHh---CCHHHHHHHHHcCCC
Q psy14474 120 MQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVE---GEEYLGASALHLAIAY---ANNELVADLIEAGAN 193 (550)
Q Consensus 120 ~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~---~~~~~g~tpLh~A~~~---g~~~~v~~Ll~~ga~ 193 (550)
.+..|..|.||||.|+..+.. ++|+.|++.+.+.+.+++. ..+..|.||||+|+.. |+.++|++|+++|++
T Consensus 6 ~~~~d~~g~t~L~~A~~~g~~---~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~ 82 (273)
T 2pnn_A 6 EKPPRLYDRRSIFDAVAQSNC---QELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARK 82 (273)
T ss_dssp -----CCCHHHHHHHHHTTCS---STTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHH
T ss_pred CCCCCcccchHHHHHHHcCCH---HHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhcc
Confidence 467889999999999976555 9999999865544666653 3456899999999987 999999999999987
Q ss_pred CCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCC--------------CC
Q psy14474 194 VTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDS--------------FG 259 (550)
Q Consensus 194 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~--------------~g 259 (550)
++.... .-......+|..|.||||+|+..|+.+++++|+++|++++.++. .|
T Consensus 83 ~~~~~~--------------~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g 148 (273)
T 2pnn_A 83 TDSLKQ--------------FVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFG 148 (273)
T ss_dssp TTCHHH--------------HHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSC
T ss_pred ccchhH--------------HhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCC
Confidence 543110 00001123456899999999999999999999999999999997 79
Q ss_pred ChHHHHHHHCCCHHHHHHHHh---CCCCCCCCCCCCCCCCCHHHHHHHcCC---------HHHHHHHHhcccccccccCc
Q psy14474 260 NMILHMVVVNDKLDMFGYALR---HPKTPASNGILNNDGFTPLTLSCQLGR---------ADVFREMLELSCKEFWRYSN 327 (550)
Q Consensus 260 ~tpLh~A~~~g~~~~v~~Ll~---~g~~~~~~~~~~~~g~tpL~~A~~~g~---------~~~~~~Ll~~g~~~~~~~~~ 327 (550)
.||||+|+..|+.+++++|++ +| ++++.+|..|+||||+|+..|+ .+++++|+++|++....
T Consensus 149 ~tpL~~A~~~g~~~~v~~Ll~~~~~g---ad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~--- 222 (273)
T 2pnn_A 149 ELPLSLAACTNQLAIVKFLLQNSWQP---ADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPT--- 222 (273)
T ss_dssp BSHHHHHHHTTCHHHHHHHHHCSSCC---CCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTT---
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccCC---CCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccc---
Confidence 999999999999999999999 78 9999999999999999999998 89999999999982100
Q ss_pred ccccCCCCCcccccCcCCCCchhhHHHHHHhCCchhhhhhcchHHHHHHHHHHH-HHHHHHH
Q psy14474 328 ITCSAYPLNALDTLLPDGRTNWNSALFIILNGTKEAHLDMLDGGIIQRLLEEKW-KTFAQRQ 388 (550)
Q Consensus 328 ~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~v~~ll~~k~-~~~~~~~ 388 (550)
...++..+..|.||++.|. ..|. .++++.|+++|+ ++..+..
T Consensus 223 -------~~~~~~~d~~g~TpL~~A~---~~g~---------~~iv~~Ll~~ga~dp~~~~~ 265 (273)
T 2pnn_A 223 -------LKLEEITNRKGLTPLALAA---SSGK---------IGVLAYILQREIHEPECRHA 265 (273)
T ss_dssp -------CCGGGCCCTTSCCHHHHHH---HTTC---------HHHHHHHHHHHTC-------
T ss_pred -------cccccccCCCCCCHHHHHH---HhCh---------HHHHHHHHHCCCCCchhhhh
Confidence 0011345566776666552 2222 268999999998 6655543
No 50
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.97 E-value=4.3e-31 Score=249.13 Aligned_cols=196 Identities=18% Similarity=0.162 Sum_probs=165.8
Q ss_pred CChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccc
Q psy14474 127 GETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPR 206 (550)
Q Consensus 127 g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~ 206 (550)
|+||||+|+.. |+.+++++|++. +.+++...+..|.||||+|+..|+.+++++|+++|++++...
T Consensus 2 g~t~L~~A~~~---g~~~~v~~Ll~~----~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~-------- 66 (228)
T 2dzn_A 2 SNYPLHQACME---NEFFKVQELLHS----KPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDD-------- 66 (228)
T ss_dssp -CCHHHHHHHT---TCHHHHHHHHHH----CGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGG--------
T ss_pred CccHHHHHHHh---CCHHHHHHHHhc----CccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccc--------
Confidence 78999999965 556999999999 566666556799999999999999999999999996555321
Q ss_pred cCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCC--CCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCC
Q psy14474 207 DQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSG--AIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKT 284 (550)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g--a~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~ 284 (550)
.+|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 67 --------------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-- 130 (228)
T 2dzn_A 67 --------------YPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENG-- 130 (228)
T ss_dssp --------------CCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT--
T ss_pred --------------cCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcC--
Confidence 13468999999999999999999999999 999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcc-cccccccCcccccCCCCCcccccCcCCCCchhhHHHHHHhCCchh
Q psy14474 285 PASNGILNNDGFTPLTLSCQLGRADVFREMLELS-CKEFWRYSNITCSAYPLNALDTLLPDGRTNWNSALFIILNGTKEA 363 (550)
Q Consensus 285 ~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g-~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~g~~~~ 363 (550)
++++.+|..|.||||+|+..|+.+++++|+++| ++ ++..+..|+||++.+. ..|.
T Consensus 131 -~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-----------------~~~~d~~g~t~L~~A~---~~~~--- 186 (228)
T 2dzn_A 131 -ASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSA-----------------VNWQDKQGWTPLFHAL---AEGH--- 186 (228)
T ss_dssp -CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCC-----------------SCCCCTTSCCHHHHHH---HTTC---
T ss_pred -CCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCccc-----------------ccCcCCCCCCHHHHHH---HcCC---
Confidence 999999999999999999999999999999999 76 5666667777776663 2221
Q ss_pred hhhhcchHHHHHHH-HHHHHH
Q psy14474 364 HLDMLDGGIIQRLL-EEKWKT 383 (550)
Q Consensus 364 ~~~~~~~~~v~~ll-~~k~~~ 383 (550)
.++++.|+ +.|.+.
T Consensus 187 ------~~~v~~Ll~~~ga~~ 201 (228)
T 2dzn_A 187 ------GDAAVLLVEKYGAEY 201 (228)
T ss_dssp ------HHHHHHHHHHHCCCS
T ss_pred ------HHHHHHHHHhcCCCC
Confidence 14677777 666544
No 51
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=9.4e-32 Score=240.75 Aligned_cols=157 Identities=24% Similarity=0.229 Sum_probs=140.4
Q ss_pred hhhhhhcCCCCccccccccccccccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHH
Q psy14474 96 IPVEKVLSPLDPLSKWRDHEACWQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLA 175 (550)
Q Consensus 96 ~~~~~~~~~~d~~~~l~~~~~~~~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A 175 (550)
+..|+..|+.++++.|++.++ ++|.+|.+|.||||+|+..+ +.+++++|+++ |++++..+ ..|+||||+|
T Consensus 8 L~~Aa~~G~~~~v~~Ll~~Ga--dvn~~d~~g~t~l~~a~~~~---~~~~~~~ll~~----gad~~~~d-~~g~TpLh~A 77 (169)
T 4gpm_A 8 LIEAAENGNKDRVKDLIENGA--DVNASDSDGRTPLHHAAENG---HKEVVKLLISK----GADVNAKD-SDGRTPLHHA 77 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTT---CHHHHHHHHHT----TCCTTCCC-TTSCCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCC--CCCCcCCCCCCHHHHHHHcC---CHHHHHHHHhc----ccchhhhc-cCCCCHHHHH
Confidence 567899999999999998775 48999999999999999655 45999999999 77887765 4899999999
Q ss_pred HHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCc
Q psy14474 176 IAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAK 255 (550)
Q Consensus 176 ~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~ 255 (550)
+..|+.++|++|+++|+++|.+| ..|+||||+|+..|+.++|++|+++|++++.+
T Consensus 78 ~~~g~~~~v~~Ll~~gadvn~~d-------------------------~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~ 132 (169)
T 4gpm_A 78 AENGHKEVVKLLISKGADVNAKD-------------------------SDGRTPLHHAAENGHKEVVKLLISKGADVNTS 132 (169)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCC-------------------------TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHcCCHHHHHHHHHCcCCCCCCC-------------------------CCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc
Confidence 99999999999999999999876 68999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCC
Q psy14474 256 DSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGI 290 (550)
Q Consensus 256 d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~ 290 (550)
|..|.||||+|+..|+.+++++|+++| ++++.
T Consensus 133 d~~G~TpL~~A~~~g~~~iv~~Ll~~G---A~ie~ 164 (169)
T 4gpm_A 133 DSDGRTPLDLAREHGNEEVVKLLEKQG---GWLEH 164 (169)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHTC---------
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCC---CCcCC
Confidence 999999999999999999999999999 77654
No 52
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=6.7e-31 Score=242.77 Aligned_cols=194 Identities=17% Similarity=0.217 Sum_probs=167.5
Q ss_pred CCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCcccccccc
Q psy14474 124 GSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIGSFF 203 (550)
Q Consensus 124 d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~ 203 (550)
+..+.||||.|+.. |+.+.++.|++.+ +.+++..+ ..|.||||+|+..|+.+++++|+++|++++.++
T Consensus 2 ~~~~~~~L~~A~~~---g~~~~v~~ll~~~---~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~----- 69 (201)
T 3hra_A 2 KTYEVGALLEAANQ---RDTKKVKEILQDT---TYQVDEVD-TEGNTPLNIAVHNNDIEIAKALIDRGADINLQN----- 69 (201)
T ss_dssp -CCCTTHHHHHHHT---TCHHHHHHHHTCT---TCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-----
T ss_pred CcccccHHHHHHHh---ccHHHHHHHHHcC---CCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC-----
Confidence 35688999999964 5569999999985 44776655 489999999999999999999999999998876
Q ss_pred ccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHH-HCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCC
Q psy14474 204 LPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLI-DSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHP 282 (550)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll-~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g 282 (550)
..|.||||+|+..|+.+++++|+ ..+++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 70 --------------------~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 129 (201)
T 3hra_A 70 --------------------SISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDG 129 (201)
T ss_dssp --------------------TTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHC
T ss_pred --------------------CCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence 68999999999999999999999 677899999999999999999999999999999998
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHcCC-----HHHHHHHHhcccccccccCcccccCCCCCcccccCcCCCCchhhHHHHHH
Q psy14474 283 KTPASNGILNNDGFTPLTLSCQLGR-----ADVFREMLELSCKEFWRYSNITCSAYPLNALDTLLPDGRTNWNSALFIIL 357 (550)
Q Consensus 283 ~~~~~~~~~~~~g~tpL~~A~~~g~-----~~~~~~Ll~~g~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~ 357 (550)
. ++++.+|..|.||||+|+..++ .+++++|+++|++ ++..+..|.||++.+. .
T Consensus 130 ~--~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~-----------------~~~~~~~g~t~l~~A~---~ 187 (201)
T 3hra_A 130 R--EDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGAD-----------------QSIKDNSGRTAMDYAN---Q 187 (201)
T ss_dssp C--CCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCC-----------------TTCCCTTSCCHHHHHH---H
T ss_pred C--CCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCC-----------------CCccCCCCCCHHHHHH---H
Confidence 5 7889999999999999999998 9999999999998 6666677887777663 2
Q ss_pred hCCchhhhhhcchHHHHHHHHHH
Q psy14474 358 NGTKEAHLDMLDGGIIQRLLEEK 380 (550)
Q Consensus 358 ~g~~~~~~~~~~~~~v~~ll~~k 380 (550)
.|.. ++++.|+++|
T Consensus 188 ~~~~---------~~~~~Ll~~G 201 (201)
T 3hra_A 188 KGYT---------EISKILAQYN 201 (201)
T ss_dssp HTCH---------HHHHHHHTCC
T ss_pred cCCH---------hHHHHHHhcC
Confidence 2322 4677777654
No 53
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=3.1e-31 Score=237.57 Aligned_cols=159 Identities=19% Similarity=0.159 Sum_probs=149.2
Q ss_pred CCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCcccccccccc
Q psy14474 126 LGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLP 205 (550)
Q Consensus 126 ~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~ 205 (550)
.|.||||.|+.. |+.+++++|++. +.+++..+ ..|.||||+|+..|+.+++++|+++|++++.++
T Consensus 2 ~~~t~L~~A~~~---g~~~~v~~ll~~----~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~------- 66 (167)
T 3v31_A 2 ANSLSVHQLAAQ---GEMLYLATRIEQ----ENVINHTD-EEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLG------- 66 (167)
T ss_dssp TTCCCHHHHHHT---TCHHHHHHHHHH----SSCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-------
T ss_pred CCcchHHHHHHC---CCHHHHHHHHHc----CCCcCCCC-CCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcC-------
Confidence 588999999964 556999999999 66776665 489999999999999999999999999998776
Q ss_pred ccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCC
Q psy14474 206 RDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTP 285 (550)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~ 285 (550)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 67 ------------------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--- 125 (167)
T 3v31_A 67 ------------------KGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESG--- 125 (167)
T ss_dssp ------------------TTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT---
T ss_pred ------------------CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC---
Confidence 68999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Q psy14474 286 ASNGILNNDGFTPLTLSCQLGRADVFREMLELSCK 320 (550)
Q Consensus 286 ~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~ 320 (550)
++++.+|..|.||||+|+..|+.+++++|++++++
T Consensus 126 ~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~ 160 (167)
T 3v31_A 126 ADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLK 160 (167)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999987
No 54
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=2.6e-31 Score=239.32 Aligned_cols=158 Identities=22% Similarity=0.182 Sum_probs=145.7
Q ss_pred CChHHHHHHHcCCcchHHHHHHHHHhCCCCCCc-cccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCcccccccccc
Q psy14474 127 GETLLHVLIICDTKLHTRLARTLLKCFPRLSQD-VVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLP 205 (550)
Q Consensus 127 g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~-i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~ 205 (550)
+.||||.|+.. |+.++++.|++. +.+ ++.. +..|.||||+|+..|+.++|++|+++|++++.++
T Consensus 2 ~~~~L~~A~~~---g~~~~v~~ll~~----~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~------- 66 (172)
T 3v30_A 2 DSLSIHQLAAQ---GELDQLKEHLRK----GDNLVNKP-DERGFTPLIWASAFGEIETVRFLLEWGADPHILA------- 66 (172)
T ss_dssp --CCHHHHHHT---TCHHHHHHHHTT----CSGGGGCC-CTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCC-------
T ss_pred chhhHHHHHHc---CCHHHHHHHHHc----CcccccCC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhc-------
Confidence 46899999964 556999999999 444 4444 4589999999999999999999999999998876
Q ss_pred ccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCC
Q psy14474 206 RDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTP 285 (550)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~ 285 (550)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 67 ------------------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--- 125 (172)
T 3v30_A 67 ------------------KERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARG--- 125 (172)
T ss_dssp ------------------TTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT---
T ss_pred ------------------ccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC---
Confidence 68999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Q psy14474 286 ASNGILNNDGFTPLTLSCQLGRADVFREMLELSCK 320 (550)
Q Consensus 286 ~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~ 320 (550)
++++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 126 a~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~ 160 (172)
T 3v30_A 126 ADLTTEADSGYTPMDLAVALGYRKVQQVIENHILK 160 (172)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998
No 55
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=2.1e-31 Score=237.27 Aligned_cols=159 Identities=23% Similarity=0.202 Sum_probs=144.5
Q ss_pred CCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccc
Q psy14474 125 SLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFL 204 (550)
Q Consensus 125 ~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~ 204 (550)
+...||||.|+.. |+.+++++|+++ |++++..+ ..|.||||+|+. |+.+++++|+++|++++.++
T Consensus 3 ~~~~~~L~~A~~~---g~~~~v~~Ll~~----~~~~~~~~-~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~------ 67 (162)
T 1ihb_A 3 EPWGNELASAAAR---GDLEQLTSLLQN----NVNVNAQN-GFGRTALQVMKL-GNPEIARRLLLRGANPDLKD------ 67 (162)
T ss_dssp --CHHHHHHHHHH---TCHHHHHHHTTS----CCCTTCCC-TTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCC------
T ss_pred chHhhHHHHHHHc---CCHHHHHHHHhC----CCCccccC-ccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCC------
Confidence 3467999999965 556999999998 67776655 489999999999 99999999999999998876
Q ss_pred cccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCC
Q psy14474 205 PRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKT 284 (550)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~ 284 (550)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 68 -------------------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-- 126 (162)
T 1ihb_A 68 -------------------RTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT-- 126 (162)
T ss_dssp -------------------TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS--
T ss_pred -------------------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcc--
Confidence 68999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Q psy14474 285 PAS-NGILNNDGFTPLTLSCQLGRADVFREMLELSCK 320 (550)
Q Consensus 285 ~~~-~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~ 320 (550)
++ ++.+|..|.||||+|+..|+.+++++|+++|+|
T Consensus 127 -~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 127 -ASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp -CCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred -CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 65 689999999999999999999999999999985
No 56
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=1e-30 Score=234.67 Aligned_cols=160 Identities=25% Similarity=0.268 Sum_probs=146.6
Q ss_pred CCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccc
Q psy14474 123 RGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIGSF 202 (550)
Q Consensus 123 ~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~ 202 (550)
....+.||||.|+.. |+.+++++|+++ |++++..+ ..|.||||+|+..|+.+++++|+++|++++.++
T Consensus 10 ~~~~~~~~l~~A~~~---g~~~~v~~Ll~~----g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~---- 77 (169)
T 2y1l_E 10 HGSDLGKKLLEAARA---GRDDEVRILMAN----GADVNAED-ASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVD---- 77 (169)
T ss_dssp ---CHHHHHHHHHHH---TCHHHHHHHHHT----TCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC----
T ss_pred CCCcccchHHHHHHc---CCHHHHHHHHHC----CCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccC----
Confidence 446678999999965 556999999999 77777665 489999999999999999999999999988776
Q ss_pred cccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCC
Q psy14474 203 FLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHP 282 (550)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g 282 (550)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 78 ---------------------~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 136 (169)
T 2y1l_E 78 ---------------------HAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNG 136 (169)
T ss_dssp ---------------------TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred ---------------------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 68999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcc
Q psy14474 283 KTPASNGILNNDGFTPLTLSCQLGRADVFREMLELS 318 (550)
Q Consensus 283 ~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g 318 (550)
++++.+|..|.||||+|+..|+.+++++|++.|
T Consensus 137 ---~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 137 ---ADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp ---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred ---CCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 999999999999999999999999999999876
No 57
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=1e-31 Score=261.24 Aligned_cols=188 Identities=18% Similarity=0.177 Sum_probs=166.5
Q ss_pred chhhhhhcCCCCccccccccccccccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCC-ccccCCCCCCCcHHH
Q psy14474 95 VIPVEKVLSPLDPLSKWRDHEACWQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQ-DVVEGEEYLGASALH 173 (550)
Q Consensus 95 ~~~~~~~~~~~d~~~~l~~~~~~~~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~-~i~~~~~~~g~tpLh 173 (550)
.++.++..++.+.++.++.......+|.+|.+|.||||+|+.. |+.+++++|++. |+ +++..+ ..|.||||
T Consensus 79 ~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~---g~~~~v~~Ll~~----g~~~~~~~~-~~g~tpL~ 150 (276)
T 4hbd_A 79 DAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSH---ANFPVVQQLLDS----GVCKVDKQN-RAGYSPIM 150 (276)
T ss_dssp TCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHT---TCHHHHHHHHHT----SCCCTTCCC-TTSCCHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHC---CCHHHHHHHHHC----CCCcCCCCC-CCCCCHHH
Confidence 3455666667777777766555555899999999999999965 556999999999 55 666554 58999999
Q ss_pred HHH-----HhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHC
Q psy14474 174 LAI-----AYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDS 248 (550)
Q Consensus 174 ~A~-----~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ 248 (550)
+|+ ..++.++++.|++.|++++..+ ..|.||||+|+..|+.+++++|+++
T Consensus 151 ~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~-------------------------~~g~tpLh~A~~~g~~~~v~~Ll~~ 205 (276)
T 4hbd_A 151 LTALATLKTQDDIETVLQLFRLGNINAKAS-------------------------QAGQTALMLAVSHGRVDVVKALLAC 205 (276)
T ss_dssp HGGGCCCCSHHHHHHHHHHHHHSCTTCCCT-------------------------TTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHhhhhhhHHHHHHHHHcCCCccccC-------------------------CCCCCHHHHHHHcCCHHHHHHHHhC
Confidence 999 7789999999999998877665 6899999999999999999999999
Q ss_pred CCCCCCcCCCCChHHHHHHHCCCHHHHHHHHh-CCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcc
Q psy14474 249 GAIPDAKDSFGNMILHMVVVNDKLDMFGYALR-HPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELS 318 (550)
Q Consensus 249 ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g 318 (550)
|+++|.+|..|.||||+|+..|+.+++++|++ .| ++++.+|..|.||||+|+..|+.+++++|++++
T Consensus 206 gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g---ad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 206 EADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPS---CDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTT---CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCC---CCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 99999999999999999999999999999999 78 999999999999999999999999999999976
No 58
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=3.9e-32 Score=270.97 Aligned_cols=238 Identities=14% Similarity=0.088 Sum_probs=171.1
Q ss_pred cCCcchHHHHHhcChHHHHHHHHHhhccccccCCCCCccchHHHhhh----h---ccCCCccchhhhhhcCCCCcccccc
Q psy14474 40 KNGGELVDAYNIGGQVEVEKLIKEQFGVLMYNDGTGQVIDKTEYLKW----R---YRDSDQFVIPVEKVLSPLDPLSKWR 112 (550)
Q Consensus 40 ~~~~~ll~~a~~~g~~~~~k~L~~~~~~~~~~~~~~~~~~~~~~l~~----~---~~~~~~~~~~~~~~~~~~d~~~~l~ 112 (550)
..|.++++ |+.+++++|++++..... .... ..... + .........++++..+..++++.++
T Consensus 50 ~~g~~~~~-----g~~~~v~~Ll~~g~~~~~-----~~~~--~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~ 117 (327)
T 1sw6_A 50 PSPVVNDN-----EQKMKLEAFLQRLLFPEI-----QEMP--TSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFP 117 (327)
T ss_dssp CCCCCCCH-----HHHHHHHHHHHHHHC--------------------------------------CHHHHHHHHHHHCT
T ss_pred CCCCcccC-----chhHHHHHHHHhccCCcc-----ccch--HhhhcccccccccccCCccchhHHHHHhhHHHHHHHHH
Confidence 45788876 999999999987744211 0000 00000 0 0011112234444444455666666
Q ss_pred cccccccccc-CCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCC---HHHHHHHH
Q psy14474 113 DHEACWQMQY-RGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYAN---NELVADLI 188 (550)
Q Consensus 113 ~~~~~~~~~~-~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~---~~~v~~Ll 188 (550)
+.+. ++|. +|.+|.||||+|+.. |+.++|++|+++ |++++..+ ..|.||||+|+..|+ .++++.|+
T Consensus 118 ~~g~--dvn~~~d~~g~TpLh~Aa~~---g~~~~v~~Ll~~----Gad~n~~d-~~g~TpLh~A~~~g~~~~~~~~~~ll 187 (327)
T 1sw6_A 118 NTQL--NLNIPVDEHGNTPLHWLTSI---ANLELVKHLVKH----GSNRLYGD-NMGESCLVKAVKSVNNYDSGTFEALL 187 (327)
T ss_dssp TSCC--CSCSCCSTTCCCHHHHHHHT---TCHHHHHHHHHT----TCCTTBCC-TTCCCHHHHHHHSSHHHHTTCHHHHH
T ss_pred hcCC--CcccccCCCCCcHHHHHHHc---CCHHHHHHHHHc----CCCCCCcC-CCCCCHHHHHHHhcccccHHHHHHHH
Confidence 5554 4888 899999999999954 566999999999 78887665 489999999999999 78889999
Q ss_pred HcC-CCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHh----cCCHHHHHHHHHC---------------
Q psy14474 189 EAG-ANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAAC----CSNESVYNLLIDS--------------- 248 (550)
Q Consensus 189 ~~g-a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~----~g~~~~v~~Ll~~--------------- 248 (550)
+.+ ++++.++ ..|+||||+|+. .|+.+++++|++.
T Consensus 188 ~~~~~~~~~~d-------------------------~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~ 242 (327)
T 1sw6_A 188 DYLYPCLILED-------------------------SMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQS 242 (327)
T ss_dssp HHHGGGGGEEC-------------------------TTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEE
T ss_pred HhhhccccCCC-------------------------CCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHh
Confidence 886 6677665 799999999999 8999999999987
Q ss_pred -----CCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccc
Q psy14474 249 -----GAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCKEFW 323 (550)
Q Consensus 249 -----ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~~~~ 323 (550)
|++++.+|..|.||||.|+. +++|+++ +++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 243 ~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~-----~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad--- 308 (327)
T 1sw6_A 243 GTNEKESKPNDKNGERKDSILENLD------LKWIIAN-----MLNAQDSNGDTCLNIAARLGNISIVDALLDYGAD--- 308 (327)
T ss_dssp C----------------CHHHHHCS------HHHHHHH-----TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCC---
T ss_pred hhhcccCCcccccccCCChhHHHHH------HHHHHHh-----CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---
Confidence 89999999999999999985 8999986 4788999999999999999999999999999999
Q ss_pred ccCcccccCCCCCcccccCcCCCCchhhH
Q psy14474 324 RYSNITCSAYPLNALDTLLPDGRTNWNSA 352 (550)
Q Consensus 324 ~~~~~~~~~~~l~~~~~~~~~g~~~~~~~ 352 (550)
++..+.+|+||++.|
T Consensus 309 --------------~~~~d~~G~TpL~~A 323 (327)
T 1sw6_A 309 --------------PFIANKSGLRPVDFG 323 (327)
T ss_dssp --------------TTCCCTTSCCGGGGT
T ss_pred --------------CcccCCCCCCHHHHH
Confidence 777777888887765
No 59
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=8.6e-31 Score=234.18 Aligned_cols=161 Identities=24% Similarity=0.260 Sum_probs=144.8
Q ss_pred CCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccc
Q psy14474 123 RGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIGSF 202 (550)
Q Consensus 123 ~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~ 202 (550)
.|.+|.||||.|+.. |+.++++.|++.+ +.+++..+ ..|.||||+|+..|+.+++++|+++|++++.++
T Consensus 4 ~~~~~~~~l~~A~~~---g~~~~v~~ll~~~---~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~---- 72 (165)
T 3twr_A 4 GNSEADRQLLEAAKA---GDVETVKKLCTVQ---SVNCRDIE-GRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKD---- 72 (165)
T ss_dssp --CHHHHHHHHHHHH---TCHHHHHHHCCTT---TTTCCCTT-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC----
T ss_pred CcchhhHHHHHHHHh---CCHHHHHHHHHcC---CCCccccc-cCCCCHHHHHHHcChHHHHHHHHhcCCCCCccC----
Confidence 467899999999965 5569999999974 45555544 479999999999999999999999999998876
Q ss_pred cccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCC
Q psy14474 203 FLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHP 282 (550)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g 282 (550)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 73 ---------------------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 131 (165)
T 3twr_A 73 ---------------------KGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHG 131 (165)
T ss_dssp ---------------------TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred ---------------------CCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 68999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccc
Q psy14474 283 KTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSC 319 (550)
Q Consensus 283 ~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~ 319 (550)
++++.+|..|.||||+|+. |+.+++++|+++|+
T Consensus 132 ---a~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 132 ---ADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp ---CCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred ---CCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 9999999999999999877 99999999999986
No 60
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=4.2e-30 Score=226.70 Aligned_cols=151 Identities=21% Similarity=0.239 Sum_probs=140.0
Q ss_pred CChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccc
Q psy14474 127 GETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPR 206 (550)
Q Consensus 127 g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~ 206 (550)
+.||||.|+.. |+.+++++|+++ |++++ .+..|.||||+|+..|+.+++++|+++|++++.++
T Consensus 2 ~~~~L~~A~~~---g~~~~v~~Ll~~----g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-------- 64 (153)
T 1awc_B 2 LGKKLLEAARA---GQDDEVRILMAN----GAPFT--TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDART-------- 64 (153)
T ss_dssp HHHHHHHHHHH---TCHHHHHHHHHH----TCCCC--CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCC--------
T ss_pred ccHHHHHHHHc---CCHHHHHHHHHc----CCCCC--cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC--------
Confidence 46899999965 455999999999 55554 24589999999999999999999999999998776
Q ss_pred cCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCC
Q psy14474 207 DQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPA 286 (550)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~ 286 (550)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++| +
T Consensus 65 -----------------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---a 124 (153)
T 1awc_B 65 -----------------KVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG---A 124 (153)
T ss_dssp -----------------TTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT---C
T ss_pred -----------------CCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC---C
Confidence 68999999999999999999999999999999999999999999999999999999999 9
Q ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHH
Q psy14474 287 SNGILNNDGFTPLTLSCQLGRADVFREM 314 (550)
Q Consensus 287 ~~~~~~~~g~tpL~~A~~~g~~~~~~~L 314 (550)
+++.+|..|.||||+|+..|+.+++++|
T Consensus 125 ~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 125 DVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 9999999999999999999999999987
No 61
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=1.2e-30 Score=251.45 Aligned_cols=216 Identities=18% Similarity=0.209 Sum_probs=167.6
Q ss_pred CCCCChHHHHHHHcCCcchHHH----HHHHHHhCCCCCCccccCC---CCCCCcHHHHHH---HhCCHHHHHHHHHcCCC
Q psy14474 124 GSLGETLLHVLIICDTKLHTRL----ARTLLKCFPRLSQDVVEGE---EYLGASALHLAI---AYANNELVADLIEAGAN 193 (550)
Q Consensus 124 d~~g~t~Lh~A~~~~~~g~~~~----v~~Ll~~~~~~~~~i~~~~---~~~g~tpLh~A~---~~g~~~~v~~Ll~~ga~ 193 (550)
+..|+||||.|+..|.. +. +++|++. +++++..+ +..|.||||+|+ ..|+.++|++|+++|++
T Consensus 2 ~~~~~~~L~~A~~~g~~---~~v~~ll~~l~~~----~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~ 74 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSP---DGLEGLLSFLLTH----KKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEK 74 (260)
T ss_dssp CCCCHHHHHHHHHHTCG---GGGTTHHHHHHHH----TCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHhCCH---HHHHHHHHHHHhc----CCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhccc
Confidence 46789999999976555 85 4455558 55555433 247999999999 77999999999999877
Q ss_pred CCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcC--------------CCC
Q psy14474 194 VTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKD--------------SFG 259 (550)
Q Consensus 194 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d--------------~~g 259 (550)
.+.... ....+++..|..|.||||+|+..|+.++|++|+++|++++.+| ..|
T Consensus 75 ~~~~~~--------------~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g 140 (260)
T 3jxi_A 75 TGNMRE--------------FINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFG 140 (260)
T ss_dssp TTCHHH--------------HHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSC
T ss_pred ccchHh--------------hhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCC
Confidence 543210 0012334455689999999999999999999999999999998 689
Q ss_pred ChHHHHHHHCCCHHHHHHHHh---CCCCCCCCCCCCCCCCCHHHHHHHcCC---------HHHHHHHHhcccccccccCc
Q psy14474 260 NMILHMVVVNDKLDMFGYALR---HPKTPASNGILNNDGFTPLTLSCQLGR---------ADVFREMLELSCKEFWRYSN 327 (550)
Q Consensus 260 ~tpLh~A~~~g~~~~v~~Ll~---~g~~~~~~~~~~~~g~tpL~~A~~~g~---------~~~~~~Ll~~g~~~~~~~~~ 327 (550)
.||||+|+..|+.+++++|++ +| ++++.+|..|+||||+|+..|+ .+++++|+++|++..-.
T Consensus 141 ~tpL~~A~~~g~~~~v~~Ll~~~~~g---a~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~--- 214 (260)
T 3jxi_A 141 ELPLSLAACTNQPHIVHYLTENGHKQ---ADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPD--- 214 (260)
T ss_dssp SSHHHHHHHTTCHHHHHHHHHCSSCC---CCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTT---
T ss_pred CCHHHHHHHcCCHHHHHHHHhccccC---CCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccc---
Confidence 999999999999999999999 77 9999999999999999999888 79999999999981100
Q ss_pred ccccCCCCCcccccCcCCCCchhhHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHHH
Q psy14474 328 ITCSAYPLNALDTLLPDGRTNWNSALFIILNGTKEAHLDMLDGGIIQRLLEEKWKTFA 385 (550)
Q Consensus 328 ~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~v~~ll~~k~~~~~ 385 (550)
....+..+..|.||++.|. ..|. .++++.|+++|.+.-.
T Consensus 215 -------~~~~~~~d~~g~tpL~~A~---~~g~---------~~~v~~Ll~~g~~~~~ 253 (260)
T 3jxi_A 215 -------TNLEALLNNDGLSPLMMAA---KTGK---------IGIFQHIIRREIADAA 253 (260)
T ss_dssp -------CCGGGCCCTTSCCHHHHHH---HTTC---------HHHHHHHHHHHHHHHC
T ss_pred -------cchhhcccCCCCCHHHHHH---HcCC---------HHHHHHHHHhCCCccc
Confidence 0011455666776666553 2222 2589999999976643
No 62
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=4.4e-30 Score=232.88 Aligned_cols=161 Identities=19% Similarity=0.113 Sum_probs=146.8
Q ss_pred CCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccc
Q psy14474 125 SLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFL 204 (550)
Q Consensus 125 ~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~ 204 (550)
.++.+|||.|+.. |+.+++++|++.+ +.+++..+ ..|.||||+|+..|+.+++++|+++|++++.++
T Consensus 3 ~~~~~~l~~A~~~---g~~~~v~~ll~~~---~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~------ 69 (179)
T 3f6q_A 3 PEFMDDIFTQCRE---GNAVAVRLWLDNT---ENDLNQGD-DHGFSPLHWACREGRSAVVEMLIMRGARINVMN------ 69 (179)
T ss_dssp ----CCHHHHHHH---TCHHHHHHHHHCT---TSCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC------
T ss_pred HHHHHHHHHHHHc---CCHHHHHHHHhcC---cccccccC-CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcC------
Confidence 4678999999965 5569999999985 45565554 589999999999999999999999999998876
Q ss_pred cccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCC
Q psy14474 205 PRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKT 284 (550)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~ 284 (550)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 70 -------------------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-- 128 (179)
T 3f6q_A 70 -------------------RGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANG-- 128 (179)
T ss_dssp -------------------TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT--
T ss_pred -------------------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCC--
Confidence 68999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Q psy14474 285 PASNGILNNDGFTPLTLSCQLGRADVFREMLELSCK 320 (550)
Q Consensus 285 ~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~ 320 (550)
++++.+|..|.||||+|+..++.+++++|+++|++
T Consensus 129 -a~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~ 163 (179)
T 3f6q_A 129 -ALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQN 163 (179)
T ss_dssp -CCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCC
T ss_pred -CCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999998
No 63
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=4.3e-29 Score=220.84 Aligned_cols=154 Identities=19% Similarity=0.230 Sum_probs=141.1
Q ss_pred CChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccc
Q psy14474 127 GETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPR 206 (550)
Q Consensus 127 g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~ 206 (550)
|.||||.|+.. |+.++++.|++.. +.+++..+ ..|.||||+ +..|+.+++++|+++|++++.++
T Consensus 2 ~~~~L~~A~~~---g~~~~v~~ll~~~---~~~~~~~~-~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~-------- 65 (156)
T 1bd8_A 2 AGDRLSGAAAR---GDVQEVRRLLHRE---LVHPDALN-RFGKTALQV-MMFGSTAIALELLKQGASPNVQD-------- 65 (156)
T ss_dssp HHHHHHHHHHH---TCHHHHHHHHHTT---CCCTTCCC-TTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCC--------
T ss_pred cchHHHHHHHh---CCHHHHHHHHHhh---CcCccccC-CCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcC--------
Confidence 57999999965 4559999999982 45666555 489999999 99999999999999999998876
Q ss_pred cCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCC
Q psy14474 207 DQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPA 286 (550)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~ 286 (550)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++ +
T Consensus 66 -----------------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~----~ 124 (156)
T 1bd8_A 66 -----------------TSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE----S 124 (156)
T ss_dssp -----------------TTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT----S
T ss_pred -----------------CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc----c
Confidence 6899999999999999999999999999999999999999999999999999999987 6
Q ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhc
Q psy14474 287 SNGILNNDGFTPLTLSCQLGRADVFREMLEL 317 (550)
Q Consensus 287 ~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~ 317 (550)
+++.+|..|.||||+|+..|+.+++++|+++
T Consensus 125 ~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 125 DLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp CTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred CCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 7899999999999999999999999999975
No 64
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=3.3e-29 Score=225.48 Aligned_cols=170 Identities=19% Similarity=0.077 Sum_probs=147.7
Q ss_pred CccchhhhhhcCCCCccccccccccccccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcH
Q psy14474 92 DQFVIPVEKVLSPLDPLSKWRDHEACWQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASA 171 (550)
Q Consensus 92 ~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tp 171 (550)
+.++++.|+..|+.+.++.++..+.. .++.+|..|.||||+|+.. |+.+++++|+++ |++++..+ ..|.||
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~-~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~----g~~~~~~~-~~g~t~ 72 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDN-LVNKPDERGFTPLIWASAF---GEIETVRFLLEW----GADPHILA-KERESA 72 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSG-GGGCCCTTSCCHHHHHHHT---TCHHHHHHHHHH----TCCTTCCC-TTCCCH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcc-cccCCCCCCCCHHHHHHHc---CCHHHHHHHHHc----CCCchhhc-ccCCCH
Confidence 35678999999999999999987654 4789999999999999965 556999999999 77777665 489999
Q ss_pred HHHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCC
Q psy14474 172 LHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAI 251 (550)
Q Consensus 172 Lh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 251 (550)
||+|+..|+.+++++|+++|++++.++ ..|.||||+|+..|+.+++++|+++|++
T Consensus 73 L~~A~~~~~~~~v~~Ll~~g~~~~~~~-------------------------~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 127 (172)
T 3v30_A 73 LSLASTGGYTDIVGLLLERDVDINIYD-------------------------WNGGTPLLYAVRGNHVKCVEALLARGAD 127 (172)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCTTCCC-------------------------TTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHHCCCHHHHHHHHHcCCCCCCCC-------------------------CCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999998876 6899999999999999999999999999
Q ss_pred CCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCH
Q psy14474 252 PDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTP 298 (550)
Q Consensus 252 i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tp 298 (550)
++.+|..|.||||+|+..|+.+++++|++++ ++...++..|.||
T Consensus 128 ~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~---~~~~~~~~~~~~p 171 (172)
T 3v30_A 128 LTTEADSGYTPMDLAVALGYRKVQQVIENHI---LKLFQSNLVPADP 171 (172)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHH---HHHSCC-------
T ss_pred ccccCCCCCCHHHHHHHhCcHHHHHHHHHHH---HHHhcccCCCCCC
Confidence 9999999999999999999999999999999 7888888888887
No 65
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=3.8e-29 Score=237.80 Aligned_cols=161 Identities=15% Similarity=0.063 Sum_probs=121.4
Q ss_pred CCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccc
Q psy14474 125 SLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFL 204 (550)
Q Consensus 125 ~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~ 204 (550)
..|.||||.|+.. |+.++++.|+++ |++++.. ..|.||||.|+..|+.++|++|+++|++++.+|
T Consensus 3 ~~g~t~L~~a~~~---~~~~~~~~ll~~----g~~~~~~--~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d------ 67 (239)
T 1ycs_B 3 ITGQVSLPPGKRT---NLRKTGSERIAH----GMRVKFN--PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPN------ 67 (239)
T ss_dssp -------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCC------
T ss_pred ccccccCchhhhh---hhHHHHHHHhcc----CCCcccC--chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcC------
Confidence 4689999999954 555999999999 6666643 478999999999999999999999999988876
Q ss_pred cccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCC
Q psy14474 205 PRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKT 284 (550)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~ 284 (550)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 68 -------------------~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-- 126 (239)
T 1ycs_B 68 -------------------DEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESG-- 126 (239)
T ss_dssp -------------------TTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT--
T ss_pred -------------------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC--
Confidence 68999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCC-CHHHHH--HHcCCHHHHHHHHhcccccc
Q psy14474 285 PASNGILNNDGF-TPLTLS--CQLGRADVFREMLELSCKEF 322 (550)
Q Consensus 285 ~~~~~~~~~~g~-tpL~~A--~~~g~~~~~~~Ll~~g~~~~ 322 (550)
++++.++..|. ||||+| +..|+.+++++|+++|++..
T Consensus 127 -a~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~ 166 (239)
T 1ycs_B 127 -AAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMG 166 (239)
T ss_dssp -CCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTT
T ss_pred -CCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhccc
Confidence 99999998887 999999 88899999999999999843
No 66
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=6.1e-28 Score=216.59 Aligned_cols=160 Identities=23% Similarity=0.286 Sum_probs=141.4
Q ss_pred hccCCcchHHHHHhcChHHHHHHHHHhhccccccCCCCCccchHHHhhhhccCCCccchhhhhhcCCCCccccccccccc
Q psy14474 38 NYKNGGELVDAYNIGGQVEVEKLIKEQFGVLMYNDGTGQVIDKTEYLKWRYRDSDQFVIPVEKVLSPLDPLSKWRDHEAC 117 (550)
Q Consensus 38 ~~~~~~~ll~~a~~~g~~~~~k~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~ 117 (550)
+...+.++|+.|+..|+.+++++|++++
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g---------------------------------------------------- 37 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMANG---------------------------------------------------- 37 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHTT----------------------------------------------------
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHCC----------------------------------------------------
Confidence 3556789999999999999999998741
Q ss_pred cccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCcc
Q psy14474 118 WQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQR 197 (550)
Q Consensus 118 ~~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~ 197 (550)
.++|.+|..|.||||+|+.. |+.+++++|+++ |++++..+ ..|.||||+|+..|+.+++++|+++|++++.+
T Consensus 38 ~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~----g~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~ 109 (169)
T 2y1l_E 38 ADVNAEDASGWTPLHLAAFN---GHLEIVEVLLKN----GADVNAVD-HAGMTPLRLAALFGHLEIVEVLLKNGADVNAN 109 (169)
T ss_dssp CCTTCCCTTSCCHHHHHHHT---TCHHHHHHHHHT----TCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred CCCCCCCCCCCCHHHHHHHc---CCHHHHHHHHHc----CCCCCccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCC
Confidence 12577888999999999965 556999999999 77777665 48999999999999999999999999999877
Q ss_pred ccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHH
Q psy14474 198 AIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGY 277 (550)
Q Consensus 198 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~ 277 (550)
+ ..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++
T Consensus 110 ~-------------------------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ 164 (169)
T 2y1l_E 110 D-------------------------MEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEI 164 (169)
T ss_dssp C-------------------------TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred C-------------------------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHH
Confidence 6 689999999999999999999999999999999999999999999999999999
Q ss_pred HHhCC
Q psy14474 278 ALRHP 282 (550)
Q Consensus 278 Ll~~g 282 (550)
|++.|
T Consensus 165 L~~~G 169 (169)
T 2y1l_E 165 LQKLN 169 (169)
T ss_dssp HHTC-
T ss_pred HHHcC
Confidence 99875
No 67
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.95 E-value=1e-29 Score=253.40 Aligned_cols=224 Identities=13% Similarity=0.089 Sum_probs=162.6
Q ss_pred chHHHHHhcChHHHHHHHHHhhccccc-cCCCCCccchHHHhhhhccCCCccchhhhhhcCCCCcccccccccccccccc
Q psy14474 44 ELVDAYNIGGQVEVEKLIKEQFGVLMY-NDGTGQVIDKTEYLKWRYRDSDQFVIPVEKVLSPLDPLSKWRDHEACWQMQY 122 (550)
Q Consensus 44 ~ll~~a~~~g~~~~~k~L~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~ 122 (550)
+++|+|+..+..+++++|.+.+..... .+ ..+.+++|+|+..|+.++++.|++.++. +|.
T Consensus 99 ~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d-----------------~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad--~n~ 159 (327)
T 1sw6_A 99 QQQHVSFDSLLQEVNDAFPNTQLNLNIPVD-----------------EHGNTPLHWLTSIANLELVKHLVKHGSN--RLY 159 (327)
T ss_dssp -----CHHHHHHHHHHHCTTSCCCSCSCCS-----------------TTCCCHHHHHHHTTCHHHHHHHHHTTCC--TTB
T ss_pred chhHHHHHhhHHHHHHHHHhcCCCcccccC-----------------CCCCcHHHHHHHcCCHHHHHHHHHcCCC--CCC
Confidence 445778888888888888875444333 33 3445668999999999999999988754 899
Q ss_pred CCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHH----hCCHHHHHHHHHcCCCCCccc
Q psy14474 123 RGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIA----YANNELVADLIEAGANVTQRA 198 (550)
Q Consensus 123 ~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~----~g~~~~v~~Ll~~ga~~~~~~ 198 (550)
+|.+|.||||+|+..+...+.++++.|++.+ .++++..+ ..|.||||+|+. .|+.+++++|++.++....+.
T Consensus 160 ~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~---~~~~~~~d-~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~ 235 (327)
T 1sw6_A 160 GDNMGESCLVKAVKSVNNYDSGTFEALLDYL---YPCLILED-SMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKK 235 (327)
T ss_dssp CCTTCCCHHHHHHHSSHHHHTTCHHHHHHHH---GGGGGEEC-TTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHG
T ss_pred cCCCCCCHHHHHHHhcccccHHHHHHHHHhh---hccccCCC-CCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcc
Confidence 9999999999999654322258888899884 25666655 589999999999 899999999999865433322
Q ss_pred cccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHH
Q psy14474 199 IGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYA 278 (550)
Q Consensus 199 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~L 278 (550)
.+... .......+++++.+|..|.||||.|+. +++|+++ ++|.+|..|+||||+|+..|+.+++++|
T Consensus 236 ~~~~i-----~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~L 302 (327)
T 1sw6_A 236 QNRPI-----QSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDAL 302 (327)
T ss_dssp GGCCE-----EEC----------------CHHHHHCS------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHH
T ss_pred cchHH-----HhhhhcccCCcccccccCCChhHHHHH------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 11110 011223466777778999999999986 8999998 6999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCCCCCCCHHHHHHHcC
Q psy14474 279 LRHPKTPASNGILNNDGFTPLTLSCQLG 306 (550)
Q Consensus 279 l~~g~~~~~~~~~~~~g~tpL~~A~~~g 306 (550)
+++| ++++.+|.+|+||||+|++.|
T Consensus 303 l~~G---ad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 303 LDYG---ADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp HHTT---CCTTCCCTTSCCGGGGTCC--
T ss_pred HHcC---CCCcccCCCCCCHHHHHHhcC
Confidence 9999 999999999999999998765
No 68
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=1.8e-28 Score=211.58 Aligned_cols=134 Identities=23% Similarity=0.217 Sum_probs=126.8
Q ss_pred CCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhc
Q psy14474 157 SQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACC 236 (550)
Q Consensus 157 ~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~ 236 (550)
+++++..+. .|.||||+|+..|+.+++++|+++|++++.++ ..|.||||+|+.
T Consensus 2 ~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-------------------------~~g~t~L~~A~~- 54 (136)
T 1d9s_A 2 SPGIHMLGG-SSDAGLATAAARGQVETVRQLLEAGADPNALN-------------------------RFGRRPIQVMMM- 54 (136)
T ss_dssp CCCCSCCCC-CCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-------------------------TTCCTTTTTSTT-
T ss_pred CCCccCCCC-CCccHHHHHHHcCCHHHHHHHHHcCCCcCCcC-------------------------CCCCCHHHHHHc-
Confidence 456666654 89999999999999999999999999998876 689999999999
Q ss_pred CCHHHHHHHHHCCCCCCCcCCC-CChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Q psy14474 237 SNESVYNLLIDSGAIPDAKDSF-GNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREML 315 (550)
Q Consensus 237 g~~~~v~~Ll~~ga~i~~~d~~-g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll 315 (550)
|+.+++++|+++|++++.+|.. |.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..|+.+++++|+
T Consensus 55 ~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---a~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll 131 (136)
T 1d9s_A 55 GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAG---ARLDVCDAWGRLPVDLAEEQGHRDIARYLH 131 (136)
T ss_dssp SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTC---CCCCCCSSSSSCHHHHHHHHTCHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 9999999999999999999999 999999999999999999999999 999999999999999999999999999999
Q ss_pred hcccc
Q psy14474 316 ELSCK 320 (550)
Q Consensus 316 ~~g~~ 320 (550)
++|+|
T Consensus 132 ~~Gad 136 (136)
T 1d9s_A 132 AATGD 136 (136)
T ss_dssp HHHCC
T ss_pred HcCCC
Confidence 99985
No 69
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=1.6e-28 Score=238.69 Aligned_cols=190 Identities=23% Similarity=0.284 Sum_probs=163.4
Q ss_pred CChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCC-CCCcccccccccc
Q psy14474 127 GETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGA-NVTQRAIGSFFLP 205 (550)
Q Consensus 127 g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga-~~~~~~~g~~~~~ 205 (550)
+.+++|.|+ ..|+.+.++.+++.+.+ ..+|..+ .+|.||||+|+..|+.++|++|+++|+ +++.++
T Consensus 76 ~~~~l~~a~---~~~~~~~~~~l~~~~~~--~~~n~~d-~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~------- 142 (276)
T 4hbd_A 76 CRSDAHPEL---VRRHLVTFRAMSARLLD--YVVNIAD-SNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQN------- 142 (276)
T ss_dssp HSTTCCHHH---HHHHHHHHHHHCHHHHH--HHHTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCC-------
T ss_pred hccCCCHHH---HHHHHHHHHHHHHHHHh--hcCcCCC-CCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCC-------
Confidence 457888888 46788999999987321 1255544 589999999999999999999999998 777765
Q ss_pred ccCCCCCCCCCCCccCCCCCCchHHHHHH-----hcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHh
Q psy14474 206 RDQQTPRPSRHTDYEGLAYLGEYPLSWAA-----CCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALR 280 (550)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~g~tpLh~A~-----~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~ 280 (550)
..|.||||+|+ ..++.+++++|++.|++++..|..|.||||+|+..|+.+++++|++
T Consensus 143 ------------------~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~ 204 (276)
T 4hbd_A 143 ------------------RAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLA 204 (276)
T ss_dssp ------------------TTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred ------------------CCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 68999999999 6789999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh-cccccccccCcccccCCCCCcccccCcCCCCchhhHHHHHHhC
Q psy14474 281 HPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLE-LSCKEFWRYSNITCSAYPLNALDTLLPDGRTNWNSALFIILNG 359 (550)
Q Consensus 281 ~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~-~g~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~g 359 (550)
+| ++++.+|..|+||||+|+..|+.+++++|++ .|++ ++..+..|.||++.|. ..|
T Consensus 205 ~g---ad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad-----------------~~~~d~~g~TpL~~A~---~~g 261 (276)
T 4hbd_A 205 CE---ADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCD-----------------ISLTDRDGSTALMVAL---DAG 261 (276)
T ss_dssp TT---CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCC-----------------TTCCCTTSCCHHHHHH---HHT
T ss_pred CC---CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCC-----------------CcCcCCCCCCHHHHHH---HcC
Confidence 99 9999999999999999999999999999999 8998 6667778887777763 333
Q ss_pred CchhhhhhcchHHHHHHHHH
Q psy14474 360 TKEAHLDMLDGGIIQRLLEE 379 (550)
Q Consensus 360 ~~~~~~~~~~~~~v~~ll~~ 379 (550)
.. ++++.|+++
T Consensus 262 ~~---------~iv~~Ll~~ 272 (276)
T 4hbd_A 262 QS---------EIASMLYSR 272 (276)
T ss_dssp CH---------HHHHHHHHH
T ss_pred CH---------HHHHHHHhc
Confidence 32 467777765
No 70
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=7.1e-28 Score=220.91 Aligned_cols=159 Identities=22% Similarity=0.301 Sum_probs=143.4
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHH
Q psy14474 165 EYLGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNL 244 (550)
Q Consensus 165 ~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~ 244 (550)
|..|.||||+|+..|+.+++++|+++|++++.++ ..|.||||+|+..|+.+++++
T Consensus 32 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-------------------------~~g~t~L~~A~~~~~~~~v~~ 86 (192)
T 2rfm_A 32 DSYNRTPLMVACMLGMENAIDKLVENFDKLEDKD-------------------------IEGSTALIWAVKNNRLGIAEK 86 (192)
T ss_dssp CTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCC-------------------------TTSCCHHHHHHHTTCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhcccccccc-------------------------ccCccHHHHHHHcCCHHHHHH
Confidence 3589999999999999999999999999988776 689999999999999999999
Q ss_pred HHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccccccc
Q psy14474 245 LIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCKEFWR 324 (550)
Q Consensus 245 Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~~~~~ 324 (550)
|+++|++++.+|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 87 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---- 159 (192)
T 2rfm_A 87 LLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHG---ANVNDRNLEGETPLIVASKYGRSEIVKKLLELGAD---- 159 (192)
T ss_dssp HHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT---CCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC----
T ss_pred HHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCC---CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----
Confidence 99999999999999999999999999999999999999 99999999999999999999999999999999998
Q ss_pred cCcccccCCCCCcccccCcCCCCchhhHHHHHHhCCchhhhhhcchHHHHHHHHHH
Q psy14474 325 YSNITCSAYPLNALDTLLPDGRTNWNSALFIILNGTKEAHLDMLDGGIIQRLLEEK 380 (550)
Q Consensus 325 ~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~v~~ll~~k 380 (550)
++..+..|.||++.+. ..|.. ++++.|++.|
T Consensus 160 -------------~~~~~~~g~t~l~~A~---~~~~~---------~~v~~Ll~~~ 190 (192)
T 2rfm_A 160 -------------ISARDLTGLTAEASAR---IFGRQ---------EVIKIFTEVR 190 (192)
T ss_dssp -------------TTCBCTTSCBHHHHHH---HTTCH---------HHHHHHHHHH
T ss_pred -------------CCCcCCCCCCHHHHHH---HhCcH---------HHHHHHHhcc
Confidence 6666677877776663 22222 5788888775
No 71
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=2.9e-27 Score=211.58 Aligned_cols=160 Identities=19% Similarity=0.186 Sum_probs=143.2
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHH
Q psy14474 167 LGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLI 246 (550)
Q Consensus 167 ~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll 246 (550)
.|.||||.|+..|+.+++++|++.|++++.++ ..|.||||+|+..|+.+++++|+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~-------------------------~~g~t~L~~A~~~~~~~~v~~Ll 56 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTD-------------------------EEGFTPLMWAAAHGQIAVVEFLL 56 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCC-------------------------TTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCC-------------------------CCCCCHHHHHHHCCCHHHHHHHH
Confidence 57899999999999999999999999988776 68999999999999999999999
Q ss_pred HCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccC
Q psy14474 247 DSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCKEFWRYS 326 (550)
Q Consensus 247 ~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~~~~~~~ 326 (550)
++|++++.+|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 57 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------ 127 (167)
T 3v31_A 57 QNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCG---VDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGAD------ 127 (167)
T ss_dssp HTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHT---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------
T ss_pred HcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCC---CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------
Confidence 999999999999999999999999999999999999 99999999999999999999999999999999998
Q ss_pred cccccCCCCCcccccCcCCCCchhhHHHHHHhCCchhhhhhcchHHHHHHHHHHHHH
Q psy14474 327 NITCSAYPLNALDTLLPDGRTNWNSALFIILNGTKEAHLDMLDGGIIQRLLEEKWKT 383 (550)
Q Consensus 327 ~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~v~~ll~~k~~~ 383 (550)
++..+..|.||++.+. ..|.. ++++.|++++.+.
T Consensus 128 -----------~~~~~~~g~t~l~~A~---~~~~~---------~~~~~L~~~~~~~ 161 (167)
T 3v31_A 128 -----------PTIETDSGYNSMDLAV---ALGYR---------SVQQVIESHLLKL 161 (167)
T ss_dssp -----------TTCCCTTSCCHHHHHH---HHTCH---------HHHHHHHHHHHHH
T ss_pred -----------CCCcCCCCCCHHHHHH---HcCcH---------HHHHHHHHHHHHH
Confidence 6666677877777663 23322 4778888776543
No 72
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=5.8e-28 Score=214.92 Aligned_cols=154 Identities=17% Similarity=0.181 Sum_probs=141.5
Q ss_pred ccchhhhhhcCCCCccccccccccccccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHH
Q psy14474 93 QFVIPVEKVLSPLDPLSKWRDHEACWQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASAL 172 (550)
Q Consensus 93 ~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpL 172 (550)
.++++.|+..|+.+.++.+++.+. +++.+|..|.||||+|+ . |+.+++++|+++ |++++..+ ..|.|||
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~~~--~~~~~~~~g~t~L~~A~---~-~~~~~v~~Ll~~----g~~~~~~~-~~g~t~L 74 (162)
T 1ihb_A 6 GNELASAAARGDLEQLTSLLQNNV--NVNAQNGFGRTALQVMK---L-GNPEIARRLLLR----GANPDLKD-RTGFAVI 74 (162)
T ss_dssp HHHHHHHHHHTCHHHHHHHTTSCC--CTTCCCTTSCCHHHHCC---S-SCHHHHHHHHHT----TCCTTCCC-TTSCCHH
T ss_pred hhHHHHHHHcCCHHHHHHHHhCCC--CccccCccCccHHHHHH---c-CcHHHHHHHHHc----CCCCCCCC-CCCCCHH
Confidence 456888999999999999997664 48999999999999998 4 777999999999 77777655 4899999
Q ss_pred HHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCC-
Q psy14474 173 HLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAI- 251 (550)
Q Consensus 173 h~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~- 251 (550)
|+|+..|+.+++++|+++|++++.++ ..|.||||+|+..|+.+++++|+++|++
T Consensus 75 ~~A~~~~~~~~v~~Ll~~g~~~~~~~-------------------------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 129 (162)
T 1ihb_A 75 HDAARAGFLDTLQTLLEFQADVNIED-------------------------NEGNLPLHLAAKEGHLRVVEFLVKHTASN 129 (162)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCC-------------------------TTSCCHHHHHHHTTCHHHHHHHHHHSCCC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcC-------------------------CCCCCHHHHHHHcCCHHHHHHHHHccCCC
Confidence 99999999999999999999998876 6899999999999999999999999998
Q ss_pred CCCcCCCCChHHHHHHHCCCHHHHHHHHhCC
Q psy14474 252 PDAKDSFGNMILHMVVVNDKLDMFGYALRHP 282 (550)
Q Consensus 252 i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g 282 (550)
++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 130 ~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 160 (162)
T 1ihb_A 130 VGHRNHKGDTACDLARLYGRNEVVSLMQANG 160 (162)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred CCCcCCCCCcHHHHHHHcCCHHHHHHHHHhC
Confidence 6999999999999999999999999999999
No 73
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=1.9e-27 Score=215.42 Aligned_cols=169 Identities=14% Similarity=0.108 Sum_probs=146.7
Q ss_pred cCCcchHHHHHhcChHHHHHHHHHhhccccccCCCCCccchHHHhhhhccCCCccchhhhhhcCCCCccccccccccccc
Q psy14474 40 KNGGELVDAYNIGGQVEVEKLIKEQFGVLMYNDGTGQVIDKTEYLKWRYRDSDQFVIPVEKVLSPLDPLSKWRDHEACWQ 119 (550)
Q Consensus 40 ~~~~~ll~~a~~~g~~~~~k~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~ 119 (550)
.++.++|+.|+..|..+++++|++... .+
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~---------------------------------------------------~~ 31 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTE---------------------------------------------------ND 31 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTT---------------------------------------------------SC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCc---------------------------------------------------cc
Confidence 357788999999999999999886310 12
Q ss_pred cccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCcccc
Q psy14474 120 MQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAI 199 (550)
Q Consensus 120 ~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~ 199 (550)
++.+|..|.||||+|+.. |+.+++++|+++ |++++..+ ..|.||||+|+..|+.+++++|+++|++++.+|
T Consensus 32 ~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~----g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d- 102 (179)
T 3f6q_A 32 LNQGDDHGFSPLHWACRE---GRSAVVEMLIMR----GARINVMN-RGDDTPLHLAASHGHRDIVQKLLQYKADINAVN- 102 (179)
T ss_dssp TTCCCTTSCCHHHHHHHT---TCHHHHHHHHHT----TCCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-
T ss_pred ccccCCCCCCHHHHHHHc---CcHHHHHHHHHc----CCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccC-
Confidence 578889999999999965 556999999999 77777665 489999999999999999999999999998876
Q ss_pred ccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHH
Q psy14474 200 GSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYAL 279 (550)
Q Consensus 200 g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll 279 (550)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+
T Consensus 103 ------------------------~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~ 158 (179)
T 3f6q_A 103 ------------------------EHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAE 158 (179)
T ss_dssp ------------------------TTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHH
T ss_pred ------------------------CCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCCCCCCC
Q psy14474 280 RHPKTPASNGILNNDG 295 (550)
Q Consensus 280 ~~g~~~~~~~~~~~~g 295 (550)
++| ++++..+..+
T Consensus 159 ~~g---~~~~~~~~~~ 171 (179)
T 3f6q_A 159 KMG---QNLNRIPYKD 171 (179)
T ss_dssp HTT---CCCSCBCCCC
T ss_pred Hhh---cCcccCCccc
Confidence 999 7777766544
No 74
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.95 E-value=1.7e-28 Score=223.27 Aligned_cols=157 Identities=13% Similarity=0.059 Sum_probs=138.5
Q ss_pred CChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCH----HHHHHHHHcCCCCCccccccc
Q psy14474 127 GETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANN----ELVADLIEAGANVTQRAIGSF 202 (550)
Q Consensus 127 g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~----~~v~~Ll~~ga~~~~~~~g~~ 202 (550)
+.++|+.|++. |+.+.++.+++. +. +..++..|+||||+|+.+|+. +++++|+++|+++|.++
T Consensus 6 ~~~~l~~Aa~~---g~~~~~~~l~~~----~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d---- 72 (186)
T 3t8k_A 6 EYRTVSAAAML---GTYEDFLELFEK----GY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRT---- 72 (186)
T ss_dssp HCSSHHHHHHH---SCHHHHHHHHHH----SS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCC----
T ss_pred cccHHHHHHHc---CCHHHHHHHHhc----Cc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCC----
Confidence 56889999954 556999999997 33 333334799999999999985 59999999999999886
Q ss_pred cccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCC------HHHHHHHHHCCCCCCCcCCCCC-hHHHHHHHCCC----
Q psy14474 203 FLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSN------ESVYNLLIDSGAIPDAKDSFGN-MILHMVVVNDK---- 271 (550)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~------~~~v~~Ll~~ga~i~~~d~~g~-tpLh~A~~~g~---- 271 (550)
..|+||||+|+..|+ .+++++|+++|+++|.+|..|. ||||+|+..+.
T Consensus 73 ---------------------~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~ 131 (186)
T 3t8k_A 73 ---------------------KEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENE 131 (186)
T ss_dssp ---------------------TTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHH
T ss_pred ---------------------CCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhh
Confidence 699999999999987 6889999999999999999999 99999999544
Q ss_pred -HHHHHHHHh-CCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Q psy14474 272 -LDMFGYALR-HPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCK 320 (550)
Q Consensus 272 -~~~v~~Ll~-~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~ 320 (550)
.+++++|++ +| ++++.+|..|.||||+|++.|+.+++++|.+...+
T Consensus 132 ~~~iv~~Ll~~~g---ad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~ 179 (186)
T 3t8k_A 132 MIPLYKLIFSQSG---LQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKK 179 (186)
T ss_dssp HHHHHHHHHTSTT---CCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcC---CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHH
Confidence 569999999 88 99999999999999999999999999999987655
No 75
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=7.5e-27 Score=205.76 Aligned_cols=151 Identities=21% Similarity=0.263 Sum_probs=133.8
Q ss_pred CcchHHHHHhcChHHHHHHHHHhhccccccCCCCCccchHHHhhhhccCCCccchhhhhhcCCCCccccccccccccccc
Q psy14474 42 GGELVDAYNIGGQVEVEKLIKEQFGVLMYNDGTGQVIDKTEYLKWRYRDSDQFVIPVEKVLSPLDPLSKWRDHEACWQMQ 121 (550)
Q Consensus 42 ~~~ll~~a~~~g~~~~~k~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~ 121 (550)
..++|+.|+..|..+++++|.+++. +++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~----------------------------------------------------~~~ 29 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGA----------------------------------------------------PFT 29 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTC----------------------------------------------------CCC
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCC----------------------------------------------------CCC
Confidence 4578999999999999999987521 012
Q ss_pred cCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCcccccc
Q psy14474 122 YRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIGS 201 (550)
Q Consensus 122 ~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~ 201 (550)
+|..|.||||+|+.. |+.+++++|+++ |++++..+ ..|.||||+|+..|+.+++++|+++|++++.+|
T Consensus 30 -~~~~g~t~L~~A~~~---~~~~~v~~Ll~~----g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--- 97 (153)
T 1awc_B 30 -TDWLGTSPLHLAAQY---GHFSTTEVLLRA----GVSRDART-KVDRTPLHMAASEGHANIVEVLLKHGADVNAKD--- 97 (153)
T ss_dssp -CCTTCCCHHHHHHHH---TCHHHHHHHHTT----TCCTTCCC-TTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCC---
T ss_pred -cCCCCCCHHHHHHHc---CCHHHHHHHHHc----CCCCCCCC-CCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCC---
Confidence 467799999999965 456999999998 67777665 489999999999999999999999999998876
Q ss_pred ccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHH
Q psy14474 202 FFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYA 278 (550)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~L 278 (550)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|
T Consensus 98 ----------------------~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 98 ----------------------MLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp ----------------------TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ----------------------CCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 6899999999999999999999999999999999999999999999999999987
No 76
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=5.4e-29 Score=234.88 Aligned_cols=178 Identities=23% Similarity=0.140 Sum_probs=123.5
Q ss_pred ccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccc
Q psy14474 121 QYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIG 200 (550)
Q Consensus 121 ~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g 200 (550)
+..+.+|.||||.|+.. |+.+++++|+++ |++++..+ ..|.||||+||..|+.++|++|+++|++++.+|
T Consensus 15 ~~~~~~~~t~L~~A~~~---g~~~~v~~Ll~~----g~~~~~~d-~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d-- 84 (229)
T 2vge_A 15 RRARLNPLVLLLDAALT---GELEVVQQAVKE----MNDPSQPN-EEGITALHNAICGANYSIVDFLITAGANVNSPD-- 84 (229)
T ss_dssp CCTTSCHHHHHHHHHHH---TCHHHHHHHHHH----SSCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC--
T ss_pred cccccchhHHHHHHHHc---CCHHHHHHHHhc----CCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC--
Confidence 44455667777777744 445778877777 55665544 367788888888888888888887777777665
Q ss_pred cccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcC-CCCChHHHHH--HHCCCHHHHHH
Q psy14474 201 SFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKD-SFGNMILHMV--VVNDKLDMFGY 277 (550)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d-~~g~tpLh~A--~~~g~~~~v~~ 277 (550)
..|.||||+|+..|+.+++++|+++|++++.++ ..|.||||+| +..|+.+++++
T Consensus 85 -----------------------~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~ 141 (229)
T 2vge_A 85 -----------------------SHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATY 141 (229)
T ss_dssp -----------------------TTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHH
T ss_pred -----------------------CCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHH
Confidence 577778888887778888888887777777775 4777888877 77777788888
Q ss_pred HHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccCcccccCCCCCcccccCcCCCCchhhH
Q psy14474 278 ALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCKEFWRYSNITCSAYPLNALDTLLPDGRTNWNSA 352 (550)
Q Consensus 278 Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~~~ 352 (550)
|+++| ++++.+|..|.||++.++..+.. +.|++.|++. .++..+..|+||++.|
T Consensus 142 Ll~~g---a~~~~~~~~~~~~l~~~~~~~~~---~~ll~~ga~~---------------~~~~~d~~G~TpL~~A 195 (229)
T 2vge_A 142 LADVE---QSMGLMNSGAVYALWDYSAEFGD---ELSFREGESV---------------TVLRRDGPEETDWWWA 195 (229)
T ss_dssp HHHHH---HHTTTSGGGEEEESSCBCCSSTT---BCCBCTTCEE---------------EEEESSCTTCSSEEEE
T ss_pred HHHcC---CCcccccCCchHHHHHHhhcccc---ccCccccccc---------------cccccCCCcccHHHHH
Confidence 87777 77777777777777754443322 4556666651 1334455677777665
No 77
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=4.3e-27 Score=207.89 Aligned_cols=152 Identities=18% Similarity=0.156 Sum_probs=139.1
Q ss_pred cchhhhhhcCCCCccccccccccccccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHH
Q psy14474 94 FVIPVEKVLSPLDPLSKWRDHEACWQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALH 173 (550)
Q Consensus 94 ~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh 173 (550)
++++.|+..|+.+.++.+++. ...+++.+|..|.||||+ + ..|+.+++++|+++ |++++..+ ..|.||||
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~-~---~~~~~~~v~~Ll~~----g~~~~~~~-~~g~t~L~ 73 (156)
T 1bd8_A 4 DRLSGAAARGDVQEVRRLLHR-ELVHPDALNRFGKTALQV-M---MFGSTAIALELLKQ----GASPNVQD-TSGTSPVH 73 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHHHT-TCCCTTCCCTTSCCHHHH-S---CTTCHHHHHHHHHT----TCCTTCCC-TTSCCHHH
T ss_pred hHHHHHHHhCCHHHHHHHHHh-hCcCccccCCCCCcHHHH-H---HcCCHHHHHHHHHC----CCCCCCcC-CCCCCHHH
Confidence 457889999999999999988 545689999999999999 7 45777999999999 77777665 48999999
Q ss_pred HHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCC
Q psy14474 174 LAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPD 253 (550)
Q Consensus 174 ~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~ 253 (550)
+|+..|+.+++++|+++|++++.+| ..|.||||+|+..|+.+++++|+++ ++++
T Consensus 74 ~A~~~~~~~~v~~Ll~~g~~~~~~~-------------------------~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~ 127 (156)
T 1bd8_A 74 DAARTGFLDTLKVLVEHGADVNVPD-------------------------GTGALPIHLAVQEGHTAVVSFLAAE-SDLH 127 (156)
T ss_dssp HHHHTTCHHHHHHHHHTTCCSCCCC-------------------------TTSCCHHHHHHHHTCHHHHHHHHTT-SCTT
T ss_pred HHHHcCcHHHHHHHHHcCCCCCCcC-------------------------CCCCcHHHHHHHhChHHHHHHHHhc-cCCC
Confidence 9999999999999999999998876 6899999999999999999999999 9999
Q ss_pred CcCCCCChHHHHHHHCCCHHHHHHHHhC
Q psy14474 254 AKDSFGNMILHMVVVNDKLDMFGYALRH 281 (550)
Q Consensus 254 ~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ 281 (550)
.+|..|.||||+|+..|+.+++++|+++
T Consensus 128 ~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 128 RRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp CCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred CcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 9999999999999999999999999975
No 78
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.94 E-value=2.1e-27 Score=210.14 Aligned_cols=141 Identities=24% Similarity=0.169 Sum_probs=119.7
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHH
Q psy14474 165 EYLGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNL 244 (550)
Q Consensus 165 ~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~ 244 (550)
+..|.||||+|+..|+.++|++|+++|++++.++ ..|.||||+|+ .|+.+++++
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-------------------------~~g~t~L~~A~-~~~~~~v~~ 62 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGANPNAPN-------------------------SYGRRPIQVMM-MGSARVAEL 62 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCC-------------------------SSSCCTTTSSC-TTCHHHHHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCC-------------------------CCCCCHHHHHH-cCCHHHHHH
Confidence 3579999999999999999999999999998876 68999999985 899999999
Q ss_pred HHHCCCCCCCcCCCCCh-HHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccc
Q psy14474 245 LIDSGAIPDAKDSFGNM-ILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCKEFW 323 (550)
Q Consensus 245 Ll~~ga~i~~~d~~g~t-pLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~~~~ 323 (550)
|+++|++++.+|..|.| |||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 63 Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~g---a~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~--- 136 (156)
T 1bi7_B 63 LLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAG---ARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGG--- 136 (156)
T ss_dssp HHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHT---CCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----
T ss_pred HHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcC---CCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCC---
Confidence 99999999999999999 999999999999999999999 99999999999999999999999999999999998
Q ss_pred ccCcccccCCCCCcccccCcCCCCchhh
Q psy14474 324 RYSNITCSAYPLNALDTLLPDGRTNWNS 351 (550)
Q Consensus 324 ~~~~~~~~~~~l~~~~~~~~~g~~~~~~ 351 (550)
++..+..|.++...
T Consensus 137 --------------~~~~~~~g~t~~~~ 150 (156)
T 1bi7_B 137 --------------TRGSNHARIDAAEG 150 (156)
T ss_dssp ----------------------------
T ss_pred --------------CCccCcCcCccccc
Confidence 66666666665543
No 79
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.94 E-value=2e-27 Score=210.25 Aligned_cols=146 Identities=14% Similarity=0.076 Sum_probs=115.4
Q ss_pred cccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCcccc
Q psy14474 120 MQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAI 199 (550)
Q Consensus 120 ~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~ 199 (550)
.+..+..|.||||+|+.. |+.+++++|+++ |++++..+. .|.||||+|+ .|+.+++++|+++|++++.++
T Consensus 5 ~~~~~~~~~t~L~~A~~~---g~~~~v~~Ll~~----g~~~~~~~~-~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d- 74 (156)
T 1bi7_B 5 AGSSMEPSADWLATAAAR---GRVEEVRALLEA----GANPNAPNS-YGRRPIQVMM-MGSARVAELLLLHGAEPNCAD- 74 (156)
T ss_dssp -----CCSTTHHHHHHHH---TCHHHHHHHHTT----TCCTTCCCS-SSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCC-
T ss_pred ccCCCccchHHHHHHHHc---CCHHHHHHHHHc----CCCCCCCCC-CCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcC-
Confidence 456788899999999965 555999999999 777777654 8999999996 999999999999999998876
Q ss_pred ccccccccCCCCCCCCCCCccCCCCCCch-HHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHH
Q psy14474 200 GSFFLPRDQQTPRPSRHTDYEGLAYLGEY-PLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYA 278 (550)
Q Consensus 200 g~~~~~~~~~~~~~~~~~~~~~~~~~g~t-pLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~L 278 (550)
..|.| |||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|
T Consensus 75 ------------------------~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~L 130 (156)
T 1bi7_B 75 ------------------------PATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 130 (156)
T ss_dssp ------------------------TTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred ------------------------CCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHH
Confidence 68998 99999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCCCCCCCHHHHH
Q psy14474 279 LRHPKTPASNGILNNDGFTPLTLS 302 (550)
Q Consensus 279 l~~g~~~~~~~~~~~~g~tpL~~A 302 (550)
+++| ++++.+|..|.||.+-+
T Consensus 131 l~~g---a~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 131 RAAA---GGTRGSNHARIDAAEGP 151 (156)
T ss_dssp SSCC--------------------
T ss_pred HHcC---CCCCccCcCcCcccccC
Confidence 9999 99999999999998743
No 80
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.94 E-value=2.6e-26 Score=194.69 Aligned_cols=126 Identities=33% Similarity=0.437 Sum_probs=121.6
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHH
Q psy14474 167 LGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLI 246 (550)
Q Consensus 167 ~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll 246 (550)
+|.||||+|+..|+.+++++|+++|++++.++ ..|.||||+|+..|+.+++++|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~-------------------------~~g~t~L~~A~~~~~~~~~~~Ll 55 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKD-------------------------KNGRTPLHLAARNGHLEVVKLLL 55 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCC-------------------------TTSCCHHHHHHHHTCHHHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcC-------------------------CCCCcHHHHHHHcCcHHHHHHHH
Confidence 48999999999999999999999999988775 68999999999999999999999
Q ss_pred HCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Q psy14474 247 DSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCK 320 (550)
Q Consensus 247 ~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~ 320 (550)
++|++++.+|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..|+.+++++|+++|+|
T Consensus 56 ~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g---~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 56 EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG---ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcC---CCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999 89999999999999999999999999999999985
No 81
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=4.5e-27 Score=202.79 Aligned_cols=130 Identities=16% Similarity=0.140 Sum_probs=121.1
Q ss_pred ccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccc
Q psy14474 119 QMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRA 198 (550)
Q Consensus 119 ~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~ 198 (550)
+++.+|..|.||||+|+.. |+.+++++|+++ |++++..+ ..|.||||+|+. |+.+++++|+++|++++.++
T Consensus 4 ~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~----g~~~~~~~-~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~ 74 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAAR---GQVETVRQLLEA----GADPNALN-RFGRRPIQVMMM-GSAQVAELLLLHGAEPNCAD 74 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHT---TCHHHHHHHHHT----TCCTTCCC-TTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCB
T ss_pred CccCCCCCCccHHHHHHHc---CCHHHHHHHHHc----CCCcCCcC-CCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcC
Confidence 5789999999999999965 456999999999 77777665 489999999999 99999999999999999876
Q ss_pred cccccccccCCCCCCCCCCCccCCCCC-CchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHH
Q psy14474 199 IGSFFLPRDQQTPRPSRHTDYEGLAYL-GEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGY 277 (550)
Q Consensus 199 ~g~~~~~~~~~~~~~~~~~~~~~~~~~-g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~ 277 (550)
.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++
T Consensus 75 -------------------------~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~ 129 (136)
T 1d9s_A 75 -------------------------PATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARY 129 (136)
T ss_dssp -------------------------TTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHH
T ss_pred -------------------------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHH
Confidence 57 9999999999999999999999999999999999999999999999999999
Q ss_pred HHhCC
Q psy14474 278 ALRHP 282 (550)
Q Consensus 278 Ll~~g 282 (550)
|+++|
T Consensus 130 Ll~~G 134 (136)
T 1d9s_A 130 LHAAT 134 (136)
T ss_dssp HHHHH
T ss_pred HHHcC
Confidence 99988
No 82
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=1.5e-26 Score=206.56 Aligned_cols=157 Identities=22% Similarity=0.211 Sum_probs=137.3
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHc-CCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHH
Q psy14474 166 YLGASALHLAIAYANNELVADLIEA-GANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNL 244 (550)
Q Consensus 166 ~~g~tpLh~A~~~g~~~~v~~Ll~~-ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~ 244 (550)
.+|.||||.|+..|+.++++.|++. +.+++.. +..|.||||+|+..|+.+++++
T Consensus 6 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~-------------------------~~~g~t~L~~A~~~~~~~~v~~ 60 (165)
T 3twr_A 6 SEADRQLLEAAKAGDVETVKKLCTVQSVNCRDI-------------------------EGRQSTPLHFAAGYNRVSVVEY 60 (165)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCT-------------------------TTTCCCHHHHHHHTTCHHHHHH
T ss_pred chhhHHHHHHHHhCCHHHHHHHHHcCCCCcccc-------------------------ccCCCCHHHHHHHcChHHHHHH
Confidence 4789999999999999999999985 4444444 3688999999999999999999
Q ss_pred HHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccccccc
Q psy14474 245 LIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCKEFWR 324 (550)
Q Consensus 245 Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~~~~~ 324 (550)
|+++|++++.+|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 61 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---- 133 (165)
T 3twr_A 61 LLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHG---AVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGAD---- 133 (165)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----
T ss_pred HHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCC---CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----
Confidence 99999999999999999999999999999999999999 99999999999999999999999999999999998
Q ss_pred cCcccccCCCCCcccccCcCCCCchhhHHHHHHhCCchhhhhhcchHHHHHHHHHH
Q psy14474 325 YSNITCSAYPLNALDTLLPDGRTNWNSALFIILNGTKEAHLDMLDGGIIQRLLEEK 380 (550)
Q Consensus 325 ~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~v~~ll~~k 380 (550)
++..+.+|+||++.+. .+. .++++.|++.|
T Consensus 134 -------------~~~~~~~g~t~l~~a~----~~~---------~~i~~~L~~~g 163 (165)
T 3twr_A 134 -------------PTKKNRDGNTPLDLVK----DGD---------TDIQDLLRGDA 163 (165)
T ss_dssp -------------TTCCCTTSCCTGGGSC----TTC---------HHHHHHHHTC-
T ss_pred -------------CcccCCCCCChhHhHh----cCC---------hHHHHHHhhcc
Confidence 6667778887777651 121 15677777665
No 83
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=2.1e-26 Score=198.57 Aligned_cols=125 Identities=23% Similarity=0.260 Sum_probs=119.9
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHH
Q psy14474 166 YLGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLL 245 (550)
Q Consensus 166 ~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~L 245 (550)
..|.||||+|+..|+.+++++|+++|++++.+| ..|.||||+|+..|+.+++++|
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~-------------------------~~g~t~L~~A~~~~~~~~v~~L 66 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMANGADVNAKD-------------------------EYGLTPLYLATAHGHLEIVEVL 66 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCC-------------------------TTSCCHHHHHHHHTCHHHHHHH
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcC-------------------------CCCCCHHHHHHHcCCHHHHHHH
Confidence 468999999999999999999999999998776 6899999999999999999999
Q ss_pred HHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcc
Q psy14474 246 IDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELS 318 (550)
Q Consensus 246 l~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g 318 (550)
+++|++++.+|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 67 l~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g---~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 67 LKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHG---ADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999 899999999999999999999999999999986
No 84
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=1.7e-27 Score=226.44 Aligned_cols=188 Identities=20% Similarity=0.163 Sum_probs=134.9
Q ss_pred CCccchhhhhhcCCCCccccccccccccccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCc
Q psy14474 91 SDQFVIPVEKVLSPLDPLSKWRDHEACWQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGAS 170 (550)
Q Consensus 91 ~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~t 170 (550)
.+.++++.|+..+..+.++.+++++.. ++. +..|.||||.|+.. |+.+++++|+++ |++++..+ ..|.|
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~--~~~-~~~~~t~L~~A~~~---g~~~~v~~Ll~~----g~~~~~~d-~~g~t 72 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMR--VKF-NPLPLALLLDSSLE---GEFDLVQRIIYE----VDDPSLPN-DEGIT 72 (239)
T ss_dssp ------------------------------------CHHHHHHHHHH---TCHHHHHHHTST----TSSCCCCC-TTSCC
T ss_pred cccccCchhhhhhhHHHHHHHhccCCC--ccc-CchhhHHHHHHHHc---CCHHHHHHHHHc----CCCCCCcC-CCCCC
Confidence 457789999999999999999998876 443 37899999999965 556999999999 77777765 48999
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCC
Q psy14474 171 ALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGA 250 (550)
Q Consensus 171 pLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga 250 (550)
|||+||..|+.++|++|+++|++++.+| ..|+||||+|+..|+.+++++|+++|+
T Consensus 73 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~d-------------------------~~g~tpL~~A~~~~~~~~v~~Ll~~ga 127 (239)
T 1ycs_B 73 ALHNAVCAGHTEIVKFLVQFGVNVNAAD-------------------------SDGWTPLHCAASCNNVQVCKFLVESGA 127 (239)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCCTTCCC-------------------------TTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCccC-------------------------CCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 9999999999999999999999998876 689999999999999999999999999
Q ss_pred CCCCcCCCCC-hHHHHH--HHCCCHHHHHHHHhCCCCCCCCCCC---------CCCCCCHHHHHHHcCCHHHHHHHHhcc
Q psy14474 251 IPDAKDSFGN-MILHMV--VVNDKLDMFGYALRHPKTPASNGIL---------NNDGFTPLTLSCQLGRADVFREMLELS 318 (550)
Q Consensus 251 ~i~~~d~~g~-tpLh~A--~~~g~~~~v~~Ll~~g~~~~~~~~~---------~~~g~tpL~~A~~~g~~~~~~~Ll~~g 318 (550)
+++.+|..|. ||||+| +..|+.+++++|+++| ++++.. +..+.+|+++|.+.|. +++.|.+.+
T Consensus 128 ~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~---a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~--~i~vl~~~~ 202 (239)
T 1ycs_B 128 AVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQ---EKMGIMNKGVIYALWDYEPQNDDELPMKEGD--CMTIIHRED 202 (239)
T ss_dssp CTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHH---HHTTTTGGGEEEESSCBCCSSTTBCCBCSSC--EEEECCCCT
T ss_pred CcceecCCCCcchHHHHHHhhhccHHHHHHHHHhh---hcccccccceEEEEeccCCCCCCcccccCCC--EEEEEEecC
Confidence 9999998887 999999 7889999999999998 666655 6678899988888775 344444444
Q ss_pred c
Q psy14474 319 C 319 (550)
Q Consensus 319 ~ 319 (550)
.
T Consensus 203 ~ 203 (239)
T 1ycs_B 203 E 203 (239)
T ss_dssp T
T ss_pred C
Confidence 3
No 85
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.93 E-value=1.1e-26 Score=219.12 Aligned_cols=192 Identities=18% Similarity=0.091 Sum_probs=142.8
Q ss_pred HHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCC
Q psy14474 146 ARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYL 225 (550)
Q Consensus 146 v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (550)
++.|+++++.. +.....+.+|.||||+|+..|+.++|++|+++|++++.+| ..
T Consensus 1 v~~ll~~~~~~--~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d-------------------------~~ 53 (229)
T 2vge_A 1 MRSVLRKAGSP--RKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPN-------------------------EE 53 (229)
T ss_dssp ---------CC--CCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCC-------------------------TT
T ss_pred CeehhccCCCC--ccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCC-------------------------CC
Confidence 46788884432 1122334578899999999999999999999999998876 68
Q ss_pred CchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCC-CCCCCHHHHH--
Q psy14474 226 GEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILN-NDGFTPLTLS-- 302 (550)
Q Consensus 226 g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~-~~g~tpL~~A-- 302 (550)
|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++| ++++.++ ..|.||||+|
T Consensus 54 g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g---a~~~~~~~~~g~tpL~~A~a 130 (229)
T 2vge_A 54 GITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHG---AAIFATTLSDGATAFEKCDP 130 (229)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT---CCTTCCCSSTTCCTGGGCCT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCcccccCCCCCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999 8999987 6999999999
Q ss_pred HHcCCHHHHHHHHhcccccccccCcccccCCC---CCcccccCcCCCCc-hhhHHHHHHhCCchhhhhhcch
Q psy14474 303 CQLGRADVFREMLELSCKEFWRYSNITCSAYP---LNALDTLLPDGRTN-WNSALFIILNGTKEAHLDMLDG 370 (550)
Q Consensus 303 ~~~g~~~~~~~Ll~~g~~~~~~~~~~~~~~~~---l~~~~~~~~~g~~~-~~~~~~~~~~g~~~~~~~~~~~ 370 (550)
+..|+.+++++|+++|++.............. ....+.+.+.|... .... ...|.||+|.++..+
T Consensus 131 ~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~ll~~ga~~~~~~~---d~~G~TpL~~A~~~g 199 (229)
T 2vge_A 131 YREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGDELSFREGESVTVLRR---DGPEETDWWWAALHG 199 (229)
T ss_dssp TSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSSTTBCCBCTTCEEEEEES---SCTTCSSEEEEEETT
T ss_pred HhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhccccccCcccccccccccc---CCCcccHHHHHHHcC
Confidence 99999999999999999844332221111110 11122333344321 1111 135788988887765
No 86
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=3.5e-26 Score=197.40 Aligned_cols=134 Identities=19% Similarity=0.169 Sum_probs=118.3
Q ss_pred CCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhc
Q psy14474 157 SQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACC 236 (550)
Q Consensus 157 ~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~ 236 (550)
|+|+ ..+..|.||||+|+..|+.+++++|+++|++++.++ ..|.||||+|+..
T Consensus 1 G~d~--~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-------------------------~~g~t~L~~A~~~ 53 (137)
T 3c5r_A 1 GIDP--FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKD-------------------------HAGWTPLHEACNH 53 (137)
T ss_dssp ---C--CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC-------------------------TTSCCHHHHHHHT
T ss_pred CCCC--CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCC-------------------------CCCCCHHHHHHHc
Confidence 4455 234689999999999999999999999999998776 6899999999999
Q ss_pred CCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh
Q psy14474 237 SNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLE 316 (550)
Q Consensus 237 g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~ 316 (550)
|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..+..+++++|.+
T Consensus 54 ~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---a~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~ 130 (137)
T 3c5r_A 54 GHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYG---ASRNAVNIFGLRPVDYTDDESMKSLLLLPEK 130 (137)
T ss_dssp TCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCGGGGCCCHHHHHHHSCC--
T ss_pred CCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCCCCCCCCCCHHHHHhhccHHHHHhhccc
Confidence 9999999999999999999999999999999999999999999999 9999999999999999999999999888877
Q ss_pred cccc
Q psy14474 317 LSCK 320 (550)
Q Consensus 317 ~g~~ 320 (550)
.+..
T Consensus 131 ~~~s 134 (137)
T 3c5r_A 131 NESS 134 (137)
T ss_dssp ----
T ss_pred cccC
Confidence 6543
No 87
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.93 E-value=3e-25 Score=191.32 Aligned_cols=128 Identities=25% Similarity=0.260 Sum_probs=115.1
Q ss_pred cCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCcccccc
Q psy14474 122 YRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIGS 201 (550)
Q Consensus 122 ~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~ 201 (550)
.....|.||||+|+.. |+.+++++|+++ |++++..+ ..|.||||+|+..|+.+++++|+++|++++.+|
T Consensus 9 ~~~~~~~t~l~~A~~~---g~~~~v~~Ll~~----g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d--- 77 (136)
T 2jab_A 9 HHGSDLGKKLLEAARA---GQDDEVRILMAN----GADVNAKD-EYGLTPLYLATAHGHLEIVEVLLKNGADVNAVD--- 77 (136)
T ss_dssp ---CHHHHHHHHHHHH---TCHHHHHHHHHT----TCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC---
T ss_pred cccccccHHHHHHHHh---CCHHHHHHHHHc----CCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCC---
Confidence 3456789999999965 455999999999 77777665 489999999999999999999999999998876
Q ss_pred ccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhC
Q psy14474 202 FFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRH 281 (550)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ 281 (550)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++
T Consensus 78 ----------------------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ 135 (136)
T 2jab_A 78 ----------------------AIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKL 135 (136)
T ss_dssp ----------------------TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred ----------------------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 6899999999999999999999999999999999999999999999999999999987
Q ss_pred C
Q psy14474 282 P 282 (550)
Q Consensus 282 g 282 (550)
|
T Consensus 136 G 136 (136)
T 2jab_A 136 N 136 (136)
T ss_dssp -
T ss_pred C
Confidence 6
No 88
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.92 E-value=9.3e-26 Score=214.99 Aligned_cols=174 Identities=19% Similarity=0.108 Sum_probs=144.9
Q ss_pred cCCCccchhhhhhcCCCCccccccccccccccccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCC
Q psy14474 89 RDSDQFVIPVEKVLSPLDPLSKWRDHEACWQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLG 168 (550)
Q Consensus 89 ~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g 168 (550)
.+.+.+.+.++...++.+.+....... ...+..|.||||+|+ ..|+.++++.|++ |++++..+ ..|
T Consensus 12 ~~~~~~~~l~~~~~g~~~~~~~~~~~~-----~~~~~~g~t~L~~A~---~~g~~~~v~~Ll~-----~~~~~~~d-~~g 77 (244)
T 3ui2_A 12 AGEGAMEYLIEWKDGHSPSWVPSSYIA-----ADVVSEYETPWWTAA---RKADEQALSQLLE-----DRDVDAVD-ENG 77 (244)
T ss_dssp ETTTEEEEEEEESSCCCCEEEEGGGSC-----HHHHHHHHHHHHHHH---TTTCHHHHHHTTT-----TCCTTCBC-TTS
T ss_pred cCCCccHHHHHHHcCCCcccccccccc-----cccccCCCCHHHHHH---HcCCHHHHHHHHc-----CCCCCCcC-CCC
Confidence 455666777777777777665544332 223467999999999 5667799999999 45666655 489
Q ss_pred CcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHC
Q psy14474 169 ASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDS 248 (550)
Q Consensus 169 ~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ 248 (550)
.||||+||..|+.++|++|+++|++++.++ +..|.||||+|+..|+.+++++|+++
T Consensus 78 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~------------------------~~~g~t~L~~A~~~g~~~~v~~Ll~~ 133 (244)
T 3ui2_A 78 RTALLFVAGLGSDKCVRLLAEAGADLDHRD------------------------MRGGLTALHMAAGYVRPEVVEALVEL 133 (244)
T ss_dssp CBHHHHHHHHTCHHHHHHHHHTTCCTTCCC------------------------SSSCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCCCcCC------------------------CCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 999999999999999999999999998775 25799999999999999999999999
Q ss_pred CCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Q psy14474 249 GAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCK 320 (550)
Q Consensus 249 ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~ 320 (550)
|++++.+|..|.||||+|+..+ . +..+.||||+|+..|+.+++++|++++.+
T Consensus 134 ga~~~~~d~~g~t~l~~A~~~~---------~-----------~~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 134 GADIEVEDERGLTALELAREIL---------K-----------TTPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp TCCTTCCCTTCCCHHHHHHHHH---------T-----------TCCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred CCCCCCCCCCCCcHHHHHHHHH---------h-----------ccCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 9999999999999999998621 1 24578999999999999999999998765
No 89
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.92 E-value=3.5e-26 Score=208.02 Aligned_cols=128 Identities=16% Similarity=0.109 Sum_probs=113.4
Q ss_pred CCCChHHHHHHHcCCc-chHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCC------HHHHHHHHHcCCCCCcc
Q psy14474 125 SLGETLLHVLIICDTK-LHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYAN------NELVADLIEAGANVTQR 197 (550)
Q Consensus 125 ~~g~t~Lh~A~~~~~~-g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~------~~~v~~Ll~~ga~~~~~ 197 (550)
..|+||||+|+..+.. ++.+++++|+++ |+|+|..+ ..|+||||+|+..|+ .+++++|+++|+++|.+
T Consensus 36 ~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~----Gadvn~~d-~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~ 110 (186)
T 3t8k_A 36 VLKSNILYDVLRNNNDEARYKISMFLINK----GADIKSRT-KEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITAL 110 (186)
T ss_dssp HHTTTHHHHHTTCSCHHHHHHHHHHHHHT----TCCSSCCC-TTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSC
T ss_pred cCCCCHHHHHHHcCCcchHHHHHHHHHHC----CCCCCCCC-CCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCcc
Confidence 5699999999965432 245799999999 88888876 489999999999997 68899999999999988
Q ss_pred ccccccccccCCCCCCCCCCCccCCCCCCc-hHHHHHHhcC-----CHHHHHHHHH-CCCCCCCcCCCCChHHHHHHHCC
Q psy14474 198 AIGSFFLPRDQQTPRPSRHTDYEGLAYLGE-YPLSWAACCS-----NESVYNLLID-SGAIPDAKDSFGNMILHMVVVND 270 (550)
Q Consensus 198 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~-tpLh~A~~~g-----~~~~v~~Ll~-~ga~i~~~d~~g~tpLh~A~~~g 270 (550)
| ..|. ||||+|+..+ +.+++++|++ +|+|++.+|..|.||||+|++.|
T Consensus 111 d-------------------------~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~ 165 (186)
T 3t8k_A 111 Y-------------------------KPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQ 165 (186)
T ss_dssp B-------------------------GGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTT
T ss_pred C-------------------------CCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcC
Confidence 7 5888 9999999954 4579999999 99999999999999999999999
Q ss_pred CHHHHHHHHhCC
Q psy14474 271 KLDMFGYALRHP 282 (550)
Q Consensus 271 ~~~~v~~Ll~~g 282 (550)
+.+++++|.++.
T Consensus 166 ~~~~v~~L~~~~ 177 (186)
T 3t8k_A 166 KPIALKMMEDYI 177 (186)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 999999999875
No 90
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.92 E-value=1e-24 Score=184.80 Aligned_cols=124 Identities=33% Similarity=0.414 Sum_probs=114.9
Q ss_pred CCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCcccccccccc
Q psy14474 126 LGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLP 205 (550)
Q Consensus 126 ~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~ 205 (550)
+|.||||+|+..+ +.+++++|+++ |++++..+ ..|.||||+|+..|+.+++++|+++|++++.++
T Consensus 1 ~g~t~L~~A~~~~---~~~~v~~Ll~~----~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~------- 65 (126)
T 1n0r_A 1 NGRTPLHLAARNG---HLEVVKLLLEA----GADVNAKD-KNGRTPLHLAARNGHLEVVKLLLEAGADVNAKD------- 65 (126)
T ss_dssp CCCCHHHHHHHHT---CHHHHHHHHHH----TCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-------
T ss_pred CCccHHHHHHHcC---cHHHHHHHHHc----CCCCCCcC-CCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccC-------
Confidence 5899999999654 55999999999 66776655 489999999999999999999999999988776
Q ss_pred ccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCC
Q psy14474 206 RDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHP 282 (550)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g 282 (550)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 66 ------------------~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 124 (126)
T 1n0r_A 66 ------------------KNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 124 (126)
T ss_dssp ------------------TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT
T ss_pred ------------------CCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 68999999999999999999999999999999999999999999999999999999998
No 91
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.92 E-value=1.1e-25 Score=204.73 Aligned_cols=142 Identities=23% Similarity=0.165 Sum_probs=124.7
Q ss_pred CCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccc
Q psy14474 123 RGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIGSF 202 (550)
Q Consensus 123 ~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~ 202 (550)
.+..|.||||+|+.. |+.++++.|++ |++++..+ ..|.||||+|+..|+.+++++|+++|++++.++
T Consensus 40 ~~~~g~t~L~~A~~~---g~~~~v~~Ll~-----~~~~~~~d-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~---- 106 (183)
T 3deo_A 40 VVSEYETPWWTAARK---ADEQALSQLLE-----DRDVDAVD-ENGRTALLFVAGLGSDKCVRLLAEAGADLDHRD---- 106 (183)
T ss_dssp HHHHHHHHHHHHHHT---TCHHHHHHHTT-----TSCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC----
T ss_pred CCCCCCCHHHHHHHc---CCHHHHHHHHh-----cCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCC----
Confidence 356899999999954 56699999999 45666655 489999999999999999999999999998775
Q ss_pred cccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCC
Q psy14474 203 FLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHP 282 (550)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g 282 (550)
+..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.
T Consensus 107 --------------------~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~---------- 156 (183)
T 3deo_A 107 --------------------MRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKT---------- 156 (183)
T ss_dssp --------------------SSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT----------
T ss_pred --------------------CCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC----------
Confidence 25899999999999999999999999999999999999999999874322
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhc
Q psy14474 283 KTPASNGILNNDGFTPLTLSCQLGRADVFREMLEL 317 (550)
Q Consensus 283 ~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~ 317 (550)
..+.+||++|+..|+.+++++|.++
T Consensus 157 ----------~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 157 ----------TPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp ----------CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred ----------cccccHHHHHHHcCHHHHHHHHHHh
Confidence 3467899999999999999999875
No 92
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.92 E-value=3.8e-27 Score=237.55 Aligned_cols=162 Identities=14% Similarity=0.012 Sum_probs=132.4
Q ss_pred cCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCcccccc
Q psy14474 122 YRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIGS 201 (550)
Q Consensus 122 ~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~ 201 (550)
.++.+++||||+|+.. |+.++|++|+++|+.. ...+.. +..|.||||+||.+|+.++|++|+++|++++..+.
T Consensus 87 ~~g~~~~T~Lh~Aa~~---G~~e~v~~Ll~~ga~~-~~~~~~-~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i-- 159 (376)
T 2aja_A 87 KKGIKSEVICFVAAIT---GCSSALDTLCLLLTSD-EIVKVI-QAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMI-- 159 (376)
T ss_dssp HHTCCHHHHHHHHHHH---CCHHHHHHHTTC--CC-SSCC---CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHH--
T ss_pred HcCCCcCCHHHHHHHc---CCHHHHHHHHHcCCcH-HHHHHh-ccCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccc--
Confidence 3455677999999954 5669999999995310 011111 23578999999999999999999999987432210
Q ss_pred ccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCC--cCCCCChHHHHHH-HCCCHHHHHHH
Q psy14474 202 FFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDA--KDSFGNMILHMVV-VNDKLDMFGYA 278 (550)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~--~d~~g~tpLh~A~-~~g~~~~v~~L 278 (550)
+ +.+ .||||+||..|+.++|++|+++|++++. +|..|.||||+|+ ..|+.+++++|
T Consensus 160 ------------------~--~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~L 218 (376)
T 2aja_A 160 ------------------Q--AEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFL 218 (376)
T ss_dssp ------------------S--HHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHH
T ss_pred ------------------C--CCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHH
Confidence 0 123 8999999999999999999999999988 8999999999999 99999999999
Q ss_pred HhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccc
Q psy14474 279 LRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCKE 321 (550)
Q Consensus 279 l~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~~ 321 (550)
+++| + .|.||||+|+..|+.+++++|+++|++.
T Consensus 219 l~~g---a-------~~~taL~~Aa~~g~~evv~lL~~~ga~~ 251 (376)
T 2aja_A 219 LDCP---V-------MLAYAEIHEFEYGEKYVNPFIARHVNRL 251 (376)
T ss_dssp TTSH---H-------HHHHHHHCTTTTTTTTHHHHHHHHHHHH
T ss_pred HhCC---C-------ccchHHHHHHHCCCHHHHHHHHhcCccc
Confidence 9977 3 2899999999999999999999999873
No 93
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.91 E-value=1.3e-24 Score=183.77 Aligned_cols=116 Identities=20% Similarity=0.243 Sum_probs=106.9
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHH
Q psy14474 166 YLGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLL 245 (550)
Q Consensus 166 ~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~L 245 (550)
..|.||||+|+..|+.++++.|+++|++++.++ ..|.||||+|+..|+.+++++|
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~-------------------------~~g~t~L~~A~~~~~~~~v~~L 59 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTL-------------------------EGGRKPLHYAADCGQLEILEFL 59 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCC-------------------------TTSSCHHHHHHHTTCHHHHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCcCccC-------------------------CCCCcHHHHHHHcCCHHHHHHH
Confidence 468899999999999999999999999988776 6899999999999999999999
Q ss_pred HHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHH
Q psy14474 246 IDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRAD 309 (550)
Q Consensus 246 l~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~ 309 (550)
+++|++++.+|..|.||||+|+..|+.+++++|+++| ++++.+|.+|.||||+|+..+..+
T Consensus 60 l~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g---a~~~~~~~~g~t~l~~A~~~~~~~ 120 (123)
T 3aaa_C 60 LLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKG---ADKTVKGPDGLTAFEATDNQAIKA 120 (123)
T ss_dssp HTTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHCCCHHHHH
T ss_pred HHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCCCcCCCCCCHHHHhCCHHHHH
Confidence 9999999999999999999999999999999999999 899999999999999995443333
No 94
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.91 E-value=1.5e-26 Score=233.23 Aligned_cols=29 Identities=21% Similarity=0.271 Sum_probs=25.4
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcccc
Q psy14474 292 NNDGFTPLTLSCQLGRADVFREMLELSCK 320 (550)
Q Consensus 292 ~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~ 320 (550)
.+.+.||||+|+..|+.+++++|++.|.-
T Consensus 316 ~n~~~~~L~~A~~~g~~e~v~lLl~~~~v 344 (376)
T 2aja_A 316 PGDANELLRLALRLGNQGACALLLSIPSV 344 (376)
T ss_dssp TTCCCHHHHHHHHHTCTTHHHHHTTSHHH
T ss_pred CCCccHHHHHHHHcCcHHHHHHHHcChHH
Confidence 34677899999999999999999998764
No 95
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.90 E-value=1e-24 Score=188.18 Aligned_cols=128 Identities=23% Similarity=0.229 Sum_probs=114.2
Q ss_pred cCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCcccccc
Q psy14474 122 YRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIGS 201 (550)
Q Consensus 122 ~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~ 201 (550)
.+|.+|.||||+|+.. |+.+++++|+++ |++++..+ ..|.||||+|+..|+.+++++|+++|++++.++
T Consensus 5 ~~~~~g~t~L~~A~~~---~~~~~~~~Ll~~----g~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~--- 73 (137)
T 3c5r_A 5 FTNHRGETLLHIASIK---GDIPSVEYLLQN----GSDPNVKD-HAGWTPLHEACNHGHLKVVELLLQHKALVNTTG--- 73 (137)
T ss_dssp CCCTTCCCHHHHHHHH---TCHHHHHHHHHT----TCCSCCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC---
T ss_pred CcCCCCCCHHHHHHHc---CCHHHHHHHHHc----CCCCCcCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcC---
Confidence 6789999999999965 456999999999 77777665 489999999999999999999999999998876
Q ss_pred ccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhC
Q psy14474 202 FFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRH 281 (550)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ 281 (550)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+..+++++|.+.
T Consensus 74 ----------------------~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~ 131 (137)
T 3c5r_A 74 ----------------------YQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKN 131 (137)
T ss_dssp ----------------------GGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC---
T ss_pred ----------------------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccc
Confidence 6899999999999999999999999999999999999999999999999998887766
Q ss_pred C
Q psy14474 282 P 282 (550)
Q Consensus 282 g 282 (550)
+
T Consensus 132 ~ 132 (137)
T 3c5r_A 132 E 132 (137)
T ss_dssp -
T ss_pred c
Confidence 5
No 96
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.90 E-value=2.3e-24 Score=211.59 Aligned_cols=141 Identities=18% Similarity=0.146 Sum_probs=90.3
Q ss_pred CChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccC-----CCCCCCcHHHHHHHh---CCHHHHHHHHHcCCCCCccc
Q psy14474 127 GETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEG-----EEYLGASALHLAIAY---ANNELVADLIEAGANVTQRA 198 (550)
Q Consensus 127 g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~-----~~~~g~tpLh~A~~~---g~~~~v~~Ll~~ga~~~~~~ 198 (550)
+.++||.|+.. |+.+.++.|++. |++++.. .+..|.||||+|+.. |+.+++++|+++|+++|.+|
T Consensus 151 ~~~~L~~A~~~---g~~~~v~~ll~~----g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d 223 (301)
T 2b0o_E 151 EPQRLWTAICN---RDLLSVLEAFAN----GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKA 223 (301)
T ss_dssp CHHHHHHHHHT---TCHHHHHHHHHT----TCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCC
T ss_pred hHHHHhhhhhc---cCHHHHHHHHhc----CCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCC
Confidence 44667777743 344777777776 4444432 234677777777775 67777777777777766654
Q ss_pred cccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHH
Q psy14474 199 IGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYA 278 (550)
Q Consensus 199 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~L 278 (550)
..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|
T Consensus 224 -------------------------~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~L 278 (301)
T 2b0o_E 224 -------------------------ADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELL 278 (301)
T ss_dssp -------------------------TTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred -------------------------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 4677777777777777777777777777777777777777777777777777777
Q ss_pred HhCCCCCCCCCCCCCCCCCHHHHHHHcCCH
Q psy14474 279 LRHPKTPASNGILNNDGFTPLTLSCQLGRA 308 (550)
Q Consensus 279 l~~g~~~~~~~~~~~~g~tpL~~A~~~g~~ 308 (550)
+++| ++ .|.||||+|+..|+.
T Consensus 279 l~~g---a~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 279 EQAQ---AG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHH---HH------TTSSCCC--------
T ss_pred HHhc---CC------CCCChhHHHHhcCCc
Confidence 7766 32 466777777776653
No 97
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.90 E-value=3.2e-24 Score=201.33 Aligned_cols=127 Identities=14% Similarity=0.186 Sum_probs=115.1
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHH
Q psy14474 166 YLGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLL 245 (550)
Q Consensus 166 ~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~L 245 (550)
..|.||||+||..|+.++|+.|+++|++++.+| ..|.||||+|+..|+.+++++|
T Consensus 71 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-------------------------~~g~t~L~~A~~~~~~~~v~~L 125 (222)
T 3ehr_A 71 ESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLD-------------------------KAGSTALYWACHGGHKDIVEML 125 (222)
T ss_dssp EEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-------------------------TTSCCHHHHHHHTTCHHHHHHH
T ss_pred cccccccccccccCcHHHHHHHHhCCCCccccC-------------------------CCCCCHHHHHHHcCCHHHHHHH
Confidence 368999999999999999999999999998776 6899999999999999999999
Q ss_pred HHC-CCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Q psy14474 246 IDS-GAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCK 320 (550)
Q Consensus 246 l~~-ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~ 320 (550)
+++ |++++.+|..|.||||+|+..|+.+++++|+++| ++++.+|.+|.||||+|+..|+.++++.|++.|+.
T Consensus 126 l~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g---a~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~ 198 (222)
T 3ehr_A 126 FTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKG---ARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAV 198 (222)
T ss_dssp TTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHT---CCSCCCCTTSCCHHHHCCSHHHHHHHC--------
T ss_pred HcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCccccCCCCCHHHHhcchhHHHHHHHHhccchh
Confidence 998 9999999999999999999999999999999999 99999999999999999999999999999999997
No 98
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.89 E-value=3.1e-24 Score=201.40 Aligned_cols=140 Identities=18% Similarity=0.144 Sum_probs=113.8
Q ss_pred cccCCCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHc-CCCCCccc
Q psy14474 120 MQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEA-GANVTQRA 198 (550)
Q Consensus 120 ~~~~d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~-ga~~~~~~ 198 (550)
++.++..|.||||+|+.. |+.+++++|++. |++++..+ ..|.||||+||..|+.++|++|+++ |++++.+|
T Consensus 66 v~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~----g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d 137 (222)
T 3ehr_A 66 VAEQAESIDNPLHEAAKR---GNLSWLRECLDN----RVGVNGLD-KAGSTALYWACHGGHKDIVEMLFTQPNIELNQQN 137 (222)
T ss_dssp HHHHEEEESCHHHHHHHH---TCHHHHHHHHHT----TCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCC
T ss_pred cccccccccccccccccc---CcHHHHHHHHhC----CCCccccC-CCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccC
Confidence 456678899999999965 556999999998 77777665 4899999999999999999999998 99988876
Q ss_pred cccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHH
Q psy14474 199 IGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYA 278 (550)
Q Consensus 199 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~L 278 (550)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.++++.|
T Consensus 138 -------------------------~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l 192 (222)
T 3ehr_A 138 -------------------------KLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKK 192 (222)
T ss_dssp -------------------------TTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC--
T ss_pred -------------------------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCCCCC
Q psy14474 279 LRHPKTPASNGILNNDG 295 (550)
Q Consensus 279 l~~g~~~~~~~~~~~~g 295 (550)
++.+ ++.+.++.++
T Consensus 193 ~~~~---~~~~~~~~~~ 206 (222)
T 3ehr_A 193 QGTD---AVRTLSNAED 206 (222)
T ss_dssp -----------------
T ss_pred hccc---hhhhccchhh
Confidence 9998 6666655443
No 99
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.89 E-value=1.3e-23 Score=177.61 Aligned_cols=113 Identities=19% Similarity=0.130 Sum_probs=100.2
Q ss_pred CCCCChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccCCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCcccccccc
Q psy14474 124 GSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLIEAGANVTQRAIGSFF 203 (550)
Q Consensus 124 d~~g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~ 203 (550)
+..|.||||+|+.. |+.+++++|+++ |++++..+ ..|.||||+|+..|+.+++++|+++|++++.+|
T Consensus 4 ~~~~~~~l~~A~~~---~~~~~v~~ll~~----~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d----- 70 (123)
T 3aaa_C 4 GSMCDKEFMWALKN---GDLDEVKDYVAK----GEDVNRTL-EGGRKPLHYAADCGQLEILEFLLLKGADINAPD----- 70 (123)
T ss_dssp ---CHHHHHHHHHT---TCHHHHHHHHHT----TCCTTSCC-TTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCC-----
T ss_pred ccccchHHHHHHHc---CCHHHHHHHHHc----CCCcCccC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCC-----
Confidence 56789999999965 456999999999 67777665 489999999999999999999999999998876
Q ss_pred ccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHC
Q psy14474 204 LPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVN 269 (550)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~ 269 (550)
..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 71 --------------------~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 71 --------------------KHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQ 116 (123)
T ss_dssp --------------------TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCH
T ss_pred --------------------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCH
Confidence 6899999999999999999999999999999999999999999433
No 100
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.89 E-value=1.2e-22 Score=197.02 Aligned_cols=130 Identities=18% Similarity=0.190 Sum_probs=121.0
Q ss_pred CcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhc---CCHHHHHHH
Q psy14474 169 ASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACC---SNESVYNLL 245 (550)
Q Consensus 169 ~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~---g~~~~v~~L 245 (550)
.++|+.|+..|+.+.++.+++.|++++..- .++..|..|.||||+|+.. |+.+++++|
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~-------------------~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~L 191 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKI-------------------PLANGHEPDETALHLAVRSVDRTSLHIVDFL 191 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBC-------------------CCSSCSSTTCBHHHHHHHHCCTTTHHHHHHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhc-------------------cccccccCCCCcchHHHHhcccchHHHHHHH
Confidence 468999999999999999999999977541 1344467899999999999 899999999
Q ss_pred HHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Q psy14474 246 IDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCK 320 (550)
Q Consensus 246 l~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~ 320 (550)
+++|+++|.+|..|.||||+|+..|+.+++++|+++| ++++.+|.+|.||||+|+..|+.+++++|+++|++
T Consensus 192 l~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g---ad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 192 VQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGK---ASIEIANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp HHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999 99999999999999999999999999999999997
No 101
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.89 E-value=9.7e-24 Score=191.72 Aligned_cols=125 Identities=18% Similarity=0.198 Sum_probs=115.4
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHH
Q psy14474 167 LGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLI 246 (550)
Q Consensus 167 ~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll 246 (550)
.|.||||+|+..|+.++++.|++ |++++.+| ..|.||||+|+..|+.+++++|+
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d-------------------------~~g~t~L~~A~~~~~~~~v~~Ll 96 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE-DRDVDAVD-------------------------ENGRTALLFVAGLGSDKCVRLLA 96 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCC-------------------------TTSCCHHHHHHHHTCHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcC-------------------------CCCCCHHHHHHHcCCHHHHHHHH
Confidence 68999999999999999999999 99888776 68999999999999999999999
Q ss_pred HCCCCCCCcC-CCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Q psy14474 247 DSGAIPDAKD-SFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCK 320 (550)
Q Consensus 247 ~~ga~i~~~d-~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~ 320 (550)
++|++++.+| ..|.||||+|+..|+.+++++|+++| ++++.+|.+|.||||+|++.++.+..+.+++.+++
T Consensus 97 ~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g---a~~~~~d~~g~tpl~~A~~~~~~~~~~~~l~~a~~ 168 (183)
T 3deo_A 97 EAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELG---ADIEVEDERGLTALELAREILKTTPKGNPMQFGRR 168 (183)
T ss_dssp HTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHT---CCTTCCCTTSCCHHHHHHHHHHTCCCCSHHHHHHH
T ss_pred HcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcC---CCCcCCCCCCCCHHHHHHHhccCcccccHHHHHHH
Confidence 9999999998 88999999999999999999999999 99999999999999999998777666666666554
No 102
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.88 E-value=8.7e-23 Score=204.91 Aligned_cols=152 Identities=20% Similarity=0.077 Sum_probs=95.7
Q ss_pred cCCCCCChHHHHHHHcCCc-chHHHHHHHHHhCCCCCCccccCC-CCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCcccc
Q psy14474 122 YRGSLGETLLHVLIICDTK-LHTRLARTLLKCFPRLSQDVVEGE-EYLGASALHLAIAYANNELVADLIEAGANVTQRAI 199 (550)
Q Consensus 122 ~~d~~g~t~Lh~A~~~~~~-g~~~~v~~Ll~~~~~~~~~i~~~~-~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~ 199 (550)
..+..+.||||.|+. . |+.++++.|+++ |++++..+ +..|.||||+|+..|+.++|++|+++|+++|.+|
T Consensus 194 l~~~~~~t~L~~Aa~---~~g~~~~v~~LL~~----Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d- 265 (368)
T 3jue_A 194 LGSLHPGALLFRASG---HPPSLPTMADALAH----GADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQAD- 265 (368)
T ss_dssp ---CCHHHHHHHHTS---SSCCHHHHHHHHHT----TCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-
T ss_pred cccCCCCcHHHHHHH---ccCCHHHHHHHHHc----CCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCC-
Confidence 334456678888873 3 566888888877 56666544 1467788888888888888888888887777665
Q ss_pred ccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHH
Q psy14474 200 GSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYAL 279 (550)
Q Consensus 200 g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll 279 (550)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+
T Consensus 266 ------------------------~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl 321 (368)
T 3jue_A 266 ------------------------SAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLR 321 (368)
T ss_dssp ------------------------TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ------------------------CCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 57778888888888888888888888888888888888888888888888888887
Q ss_pred hCCCCCCCCCCCCCCCCCHHHHHHHc
Q psy14474 280 RHPKTPASNGILNNDGFTPLTLSCQL 305 (550)
Q Consensus 280 ~~g~~~~~~~~~~~~g~tpL~~A~~~ 305 (550)
+.+....+....+..+.|+++++...
T Consensus 322 ~~~~~~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 322 LAKMREAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp HHHC----------------------
T ss_pred HcCCCcccccccCCCCCCHHHHHHHH
Confidence 76644444455566677777766554
No 103
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.88 E-value=2.4e-22 Score=197.17 Aligned_cols=131 Identities=21% Similarity=0.209 Sum_probs=119.8
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhc---CCHHHHHH
Q psy14474 168 GASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACC---SNESVYNL 244 (550)
Q Consensus 168 g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~---g~~~~v~~ 244 (550)
+.++||.|+..|+.+.++.|++.|++++..... ...|..|.||||+|+.. |+.+++++
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~-------------------~~~~~~g~t~Lh~A~~~~~~~~~~iv~~ 211 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPG-------------------PDAQAPEELVLHLAVKVANQASLPLVDF 211 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEEC-------------------SSSCSCEECHHHHHHHTCCTTTHHHHHH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCC-------------------cccCCCCccHHHHHHHhcccCcHHHHHH
Confidence 456799999999999999999999998863100 01246899999999997 89999999
Q ss_pred HHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Q psy14474 245 LIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCK 320 (550)
Q Consensus 245 Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~ 320 (550)
|+++|+++|.+|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 212 Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~g---ad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~ 284 (301)
T 2b0o_E 212 IIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGR---ALVGTVNEAGETALDIARKKHHKECEELLEQAQAG 284 (301)
T ss_dssp HHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT---CCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999 99999999999999999999999999999999987
No 104
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.88 E-value=3e-22 Score=160.15 Aligned_cols=93 Identities=31% Similarity=0.414 Sum_probs=89.4
Q ss_pred CCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHH
Q psy14474 225 LGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQ 304 (550)
Q Consensus 225 ~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~ 304 (550)
+|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++| ++++.+|.+|.||||+|+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g---a~~~~~d~~g~t~l~~A~~ 77 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG---ADVNAKDKNGRTPLHLAAR 77 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCCccCCCCCCHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred cCCHHHHHHHHhcccc
Q psy14474 305 LGRADVFREMLELSCK 320 (550)
Q Consensus 305 ~g~~~~~~~Ll~~g~~ 320 (550)
.|+.+++++|+++|++
T Consensus 78 ~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 78 NGHLEVVKLLLEAGAY 93 (93)
T ss_dssp TTCHHHHHHHHHTTCC
T ss_pred cCCHHHHHHHHHcCCC
Confidence 9999999999999985
No 105
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.87 E-value=6.1e-22 Score=192.06 Aligned_cols=128 Identities=15% Similarity=0.092 Sum_probs=112.4
Q ss_pred CChHHHHHHHcCCcchHHHHHHHHHhCCCCCCc--cccCCCCCCCcHHHHHHHh---CCHHHHHHHHHcCCCCCcccccc
Q psy14474 127 GETLLHVLIICDTKLHTRLARTLLKCFPRLSQD--VVEGEEYLGASALHLAIAY---ANNELVADLIEAGANVTQRAIGS 201 (550)
Q Consensus 127 g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~--i~~~~~~~g~tpLh~A~~~---g~~~~v~~Ll~~ga~~~~~~~g~ 201 (550)
..++|+.|+.. |+.+.++.+++.|++.... ++.. +..|.||||+|+.. |+.+++++|+++|+++|.+|
T Consensus 130 ~l~~l~~a~~~---~d~~~~~~ll~~g~~~~~~~~l~~~-~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d--- 202 (278)
T 1dcq_A 130 KLHSLCEAVKT---RDIFGLLQAYADGVDLTEKIPLANG-HEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQT--- 202 (278)
T ss_dssp HHHHHHHHHHT---TCHHHHHHHHHTTCCTTSBCCCSSC-SSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCC---
T ss_pred hhhhhhhHhhh---cccHHHHHHHHhhcchhhhcccccc-ccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccC---
Confidence 45799999954 5569999999995443222 2222 45899999999999 89999999999999999876
Q ss_pred ccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhC
Q psy14474 202 FFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRH 281 (550)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ 281 (550)
..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++
T Consensus 203 ----------------------~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ 260 (278)
T 1dcq_A 203 ----------------------GKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQA 260 (278)
T ss_dssp ----------------------TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred ----------------------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 6899999999999999999999999999999999999999999999999999999999
Q ss_pred CC
Q psy14474 282 PK 283 (550)
Q Consensus 282 g~ 283 (550)
|+
T Consensus 261 ga 262 (278)
T 1dcq_A 261 LS 262 (278)
T ss_dssp HT
T ss_pred CC
Confidence 83
No 106
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.87 E-value=5.4e-22 Score=208.88 Aligned_cols=139 Identities=19% Similarity=0.164 Sum_probs=120.0
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHh---cCCHHHHHH
Q psy14474 168 GASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAAC---CSNESVYNL 244 (550)
Q Consensus 168 g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~---~g~~~~v~~ 244 (550)
..+.||.|+..|+.++|+.|+++|+++|.+.. ....|..|.||||+|+. .|+.+++++
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~-------------------~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~ 192 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLP-------------------GPDAQAPEELVLHLAVKVANQASLPLVDF 192 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBC-------------------CSSSCCSCBCHHHHHHHTCCTTTHHHHHH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCC-------------------CcccccccchHHHHHHHhcccccHHHHHH
Confidence 34789999999999999999999999987621 11224689999999966 899999999
Q ss_pred HHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccccccc
Q psy14474 245 LIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCKEFWR 324 (550)
Q Consensus 245 Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~~~~~ 324 (550)
|+++|+++|.+|..|+||||+|+..|+.+++++|+++| ++++.+|.+|.||||+|+..|+.+++++|+++|++...+
T Consensus 193 Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g---a~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~ 269 (497)
T 3lvq_E 193 IIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGR---ALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAF 269 (497)
T ss_dssp HHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTC---CCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----
T ss_pred HHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcC---CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999 999999999999999999999999999999999996554
Q ss_pred cCcc
Q psy14474 325 YSNI 328 (550)
Q Consensus 325 ~~~~ 328 (550)
+.+.
T Consensus 270 ~~h~ 273 (497)
T 3lvq_E 270 PLHV 273 (497)
T ss_dssp ----
T ss_pred ccee
Confidence 4443
No 107
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.87 E-value=8.1e-22 Score=157.61 Aligned_cols=91 Identities=35% Similarity=0.441 Sum_probs=86.8
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHH
Q psy14474 167 LGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLI 246 (550)
Q Consensus 167 ~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll 246 (550)
+|+||||+|+..|+.+++++|+++|++++.+| ..|.||||+|+..|+.+++++|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d-------------------------~~g~t~L~~A~~~~~~~~v~~Ll 55 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKD-------------------------KNGRTPLHLAARNGHLEVVKLLL 55 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-------------------------TTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccC-------------------------CCCCCHHHHHHHcCCHHHHHHHH
Confidence 48999999999999999999999999998876 68999999999999999999999
Q ss_pred HCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCC
Q psy14474 247 DSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHP 282 (550)
Q Consensus 247 ~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g 282 (550)
++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 56 ~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~g 91 (93)
T 1n0q_A 56 EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 91 (93)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999998
No 108
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.86 E-value=8.4e-22 Score=207.43 Aligned_cols=137 Identities=19% Similarity=0.167 Sum_probs=113.4
Q ss_pred CChHHHHHHHcCCcchHHHHHHHHHhCCCCCCccccC-----CCCCCCcHHHHHHH---hCCHHHHHHHHHcCCCCCccc
Q psy14474 127 GETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEG-----EEYLGASALHLAIA---YANNELVADLIEAGANVTQRA 198 (550)
Q Consensus 127 g~t~Lh~A~~~~~~g~~~~v~~Ll~~~~~~~~~i~~~-----~~~~g~tpLh~A~~---~g~~~~v~~Ll~~ga~~~~~~ 198 (550)
..+.||.|+.. |+.+.++.|+++ |+++|.. .+..|.||||+||. .|+.++|++|+++|+++|.+|
T Consensus 132 ~~~~L~~A~~~---g~~~~v~~ll~~----g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d 204 (497)
T 3lvq_E 132 EPQRLWTAICN---RDLLSVLEAFAN----GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKA 204 (497)
T ss_dssp CHHHHHHHHHH---TCHHHHHHHHHT----TCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCC
T ss_pred cHHHHHHHHhc---cCHHHHHHHHhh----cccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccC
Confidence 34789999954 566999999999 5666544 24589999999977 999999999999999999876
Q ss_pred cccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHH
Q psy14474 199 IGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYA 278 (550)
Q Consensus 199 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~L 278 (550)
..|+||||+|+..|+.++|++|+++|++++.+|..|.||||+|+..|+.+++++|
T Consensus 205 -------------------------~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L 259 (497)
T 3lvq_E 205 -------------------------ADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELL 259 (497)
T ss_dssp -------------------------SSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred -------------------------CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCCCCCCCHHHHHHH
Q psy14474 279 LRHPKTPASNGILNNDGFTPLTLSCQ 304 (550)
Q Consensus 279 l~~g~~~~~~~~~~~~g~tpL~~A~~ 304 (550)
+++| ++++. ||+|.+..
T Consensus 260 l~~g---a~~~~------~~~h~~~~ 276 (497)
T 3lvq_E 260 EQAQ---AGTFA------FPLHVDYS 276 (497)
T ss_dssp HHTC---C------------------
T ss_pred HHhC---CCCCC------Ccceeecc
Confidence 9999 77765 57776543
No 109
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.86 E-value=1.2e-21 Score=196.74 Aligned_cols=129 Identities=21% Similarity=0.208 Sum_probs=120.9
Q ss_pred CCCCcHHHHHHHh-CCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHH
Q psy14474 166 YLGASALHLAIAY-ANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNL 244 (550)
Q Consensus 166 ~~g~tpLh~A~~~-g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~ 244 (550)
..+.||||.|+.. |+.++++.|+++|++++..+. +..|.||||+|+..|+.+++++
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~-----------------------~~~g~TpLh~Aa~~g~~~iv~~ 253 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGADVNWVNG-----------------------GQDNATPLIQATAANSLLACEF 253 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCT-----------------------TTTCCCHHHHHHHTTCHHHHHH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCCCCcccc-----------------------ccCCCCHHHHHHHCCCHHHHHH
Confidence 3567999999999 999999999999999987641 2589999999999999999999
Q ss_pred HHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Q psy14474 245 LIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCK 320 (550)
Q Consensus 245 Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g~~~~~~~Ll~~g~~ 320 (550)
|+++|+++|.+|..|.||||+|+..|+.+++++|+++| ++++.+|.+|.||||+|+..|+.+++++|++.+..
T Consensus 254 LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~G---ad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 254 LLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRG---ADLGARDSEGRDPLTIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred HHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCc---CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999 99999999999999999999999999999998865
No 110
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.86 E-value=2.9e-22 Score=190.75 Aligned_cols=111 Identities=21% Similarity=0.213 Sum_probs=105.6
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHHH
Q psy14474 167 LGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLI 246 (550)
Q Consensus 167 ~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll 246 (550)
.|.||||+|+..|+.++|+.|++ |++++.+| ..|.||||+|+..|+.++|++|+
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d-------------------------~~g~t~L~~A~~~g~~~~v~~Ll 97 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-DRDVDAVD-------------------------ENGRTALLFVAGLGSDKCVRLLA 97 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBC-------------------------TTSCBHHHHHHHHTCHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcC-------------------------CCCCCHHHHHHHCCCHHHHHHHH
Confidence 68999999999999999999999 99988876 68999999999999999999999
Q ss_pred HCCCCCCCcC-CCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHcC
Q psy14474 247 DSGAIPDAKD-SFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLG 306 (550)
Q Consensus 247 ~~ga~i~~~d-~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~A~~~g 306 (550)
++|++++.+| ..|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..+
T Consensus 98 ~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g---a~~~~~d~~g~t~l~~A~~~~ 155 (244)
T 3ui2_A 98 EAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELG---ADIEVEDERGLTALELAREIL 155 (244)
T ss_dssp HTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTCCCHHHHHHHHH
T ss_pred HcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCC---CCCCCCCCCCCcHHHHHHHHH
Confidence 9999999998 88999999999999999999999999 999999999999999998643
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.85 E-value=1.3e-21 Score=163.03 Aligned_cols=107 Identities=24% Similarity=0.233 Sum_probs=94.7
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHH
Q psy14474 165 EYLGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNL 244 (550)
Q Consensus 165 ~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~ 244 (550)
|.+|.||||+|+..|+.+++++|+++|++++.+| ..|.||||+|+..|+.+++++
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d-------------------------~~g~t~L~~A~~~~~~~~~~~ 60 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARS-------------------------KDGNTPLHLAAKNGHAEIVKL 60 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCC-------------------------SSSCCTTHHHHTTTCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC-------------------------CCCCCHHHHHHHcCcHHHHHH
Confidence 4588999999999999999999999998888765 688999999999999999999
Q ss_pred HHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHH
Q psy14474 245 LIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPL 299 (550)
Q Consensus 245 Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL 299 (550)
|+++|++++.+|..|.||||+|+..|+.+++++|+++| ++++.++..|.||-
T Consensus 61 Ll~~g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~g---a~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 61 LLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKG---ADVNARSWGSSHHH 112 (115)
T ss_dssp HTTTTCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTS---SSHHHHSCCCC---
T ss_pred HHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcC---CCCCcCCccccccc
Confidence 99999999999999999999999999999999999998 88999999888874
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.83 E-value=6.3e-21 Score=158.89 Aligned_cols=108 Identities=20% Similarity=0.202 Sum_probs=99.6
Q ss_pred CCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCHHHH
Q psy14474 222 LAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTL 301 (550)
Q Consensus 222 ~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tpL~~ 301 (550)
+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g---~~~~~~d~~g~tpl~~ 81 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKG---ADVNARSKDGNTPEHL 81 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTT---CCTTCCCTTCCCTTHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcC---CCCcccCCCCCCHHHH
Confidence 4679999999999999999999999999999999999999999999999999999999999 8999999999999999
Q ss_pred HHHcCCHHHHHHHHhcccccccccCcccccCCCCCcccccCcCCCCch
Q psy14474 302 SCQLGRADVFREMLELSCKEFWRYSNITCSAYPLNALDTLLPDGRTNW 349 (550)
Q Consensus 302 A~~~g~~~~~~~Ll~~g~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~ 349 (550)
|+..|+.+++++|+++|++ ++.....|.+|.
T Consensus 82 A~~~~~~~~~~~Ll~~ga~-----------------~n~~~~~~~~~~ 112 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDAKGAD-----------------VNARSWGSSHHH 112 (115)
T ss_dssp HHTTTCHHHHHHHHTTSSS-----------------HHHHSCCCC---
T ss_pred HHHCCCHHHHHHHHHcCCC-----------------CCcCCccccccc
Confidence 9999999999999999999 666666666554
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.78 E-value=1e-18 Score=144.14 Aligned_cols=93 Identities=23% Similarity=0.189 Sum_probs=86.2
Q ss_pred ccCCCCCCchHHHHHHhcCCHHHHHHHHHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCCCCCH
Q psy14474 219 YEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTP 298 (550)
Q Consensus 219 ~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~tp 298 (550)
....|.+|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~g---a~~~~~d~~g~tp 93 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAG---ADVXAQDKFGKTA 93 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCH
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCccccccCCCcH
Confidence 3455679999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHcCCHHHHHHH
Q psy14474 299 LTLSCQLGRADVFREM 314 (550)
Q Consensus 299 L~~A~~~g~~~~~~~L 314 (550)
||+|+..|+.+++++|
T Consensus 94 l~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 94 FDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHTCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHh
Confidence 9999999999999987
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.76 E-value=1.8e-18 Score=142.72 Aligned_cols=88 Identities=26% Similarity=0.289 Sum_probs=84.5
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHcCCCCCccccccccccccCCCCCCCCCCCccCCCCCCchHHHHHHhcCCHHHHHHH
Q psy14474 166 YLGASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLL 245 (550)
Q Consensus 166 ~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~L 245 (550)
.+|.||||+|+..|+.+++++|+++|++++.+| ..|.||||+|+..|+.+++++|
T Consensus 22 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d-------------------------~~g~tpLh~A~~~~~~~~v~~L 76 (110)
T 2zgd_A 22 SDLGKKLLEAARAGQDDEVRILMANGADVAAKD-------------------------KNGSTPLHLAARNGHLEVVKLL 76 (110)
T ss_dssp CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCC-------------------------TTCCCHHHHHHHTTCHHHHHHH
T ss_pred CccchHHHHHHHcCCHHHHHHHHHcCCCCCccC-------------------------CCCCCHHHHHHHcCCHHHHHHH
Confidence 489999999999999999999999999998776 6899999999999999999999
Q ss_pred HHCCCCCCCcCCCCChHHHHHHHCCCHHHHHHH
Q psy14474 246 IDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYA 278 (550)
Q Consensus 246 l~~ga~i~~~d~~g~tpLh~A~~~g~~~~v~~L 278 (550)
+++|++++.+|..|.||||+|+..|+.+++++|
T Consensus 77 l~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 77 LEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHcCCCccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 999999999999999999999999999999987
No 115
>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 4ekw_A* 3rw0_A*
Probab=25.42 E-value=23 Score=32.92 Aligned_cols=76 Identities=18% Similarity=0.116 Sum_probs=40.8
Q ss_pred HhhhhhHHhhchHhHHhhhhcCchHHHHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhhccCCCCchhH
Q psy14474 446 FQQGGEIKNQGFSSFMKQLKNEPAKLIFLISNIMILSCIPFRIMGDKKTEEAILIFAVPGSWFLLMFFAGAIRLTGPFVT 525 (550)
Q Consensus 446 ~e~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~ai~lsw~~ll~~~r~~~~~G~~vi 525 (550)
.|..-.++..| .+|+++ .|++++++..+..++.. ... ..+.-++-.+|++.++|.++.+..+..
T Consensus 76 ~E~~lrl~~~~-~~y~~~----~wn~~Dl~~v~~~~i~~----~~~-------~~~lr~~RilR~lrl~~~~~~l~~l~~ 139 (285)
T 3rvy_A 76 IEIILRIYVHR-ISFFKD----PWSLFDFFVVAISLVPT----SSG-------FEILRVLRVLRLFRLVTAVPQMRKIVS 139 (285)
T ss_dssp HHHHHHHHTTG-GGGGGC----HHHHHHHHHHHHHHSCS----SSS-------CTHHHHHGGGGGGHHHHSSTTHHHHHH
T ss_pred HHHHHHHHHHh-HHHHcC----ChHHhHHHHHHHHHHcc----cch-------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333344555 567775 78888877544332211 111 123445566777777777777766655
Q ss_pred HHHHHHHhhhhhh
Q psy14474 526 MVYSMITGDMLTL 538 (550)
Q Consensus 526 m~~~~i~~d~~kF 538 (550)
.+.+-+. ++..+
T Consensus 140 ~l~~~~~-~l~~~ 151 (285)
T 3rvy_A 140 ALISVIP-GMLSV 151 (285)
T ss_dssp HHHHHGG-GGHHH
T ss_pred HHHHHHH-HHHHH
Confidence 5554333 44443
No 116
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=24.71 E-value=46 Score=20.21 Aligned_cols=19 Identities=16% Similarity=0.106 Sum_probs=15.6
Q ss_pred HHHHHHHhCCHHHHHHHHH
Q psy14474 171 ALHLAIAYANNELVADLIE 189 (550)
Q Consensus 171 pLh~A~~~g~~~~v~~Ll~ 189 (550)
-+..||..|+.+.++.|-.
T Consensus 16 qiyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHH
Confidence 3678999999999998743
No 117
>4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114}
Probab=21.36 E-value=28 Score=31.12 Aligned_cols=62 Identities=10% Similarity=0.062 Sum_probs=24.1
Q ss_pred hchHhHHhhhhcCchHHHHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHHH
Q psy14474 455 QGFSSFMKQLKNEPAKLIFLISNIMILSCIPFRIMGDKKTEEAILIFAVPGSWFLLMFFAGAIRLTGPFVTMVYS 529 (550)
Q Consensus 455 ~~~~~y~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~ai~lsw~~ll~~~r~~~~~G~~vim~~~ 529 (550)
.++++|+++ .|++.+++..+..+... ... ....+.-++-.+|++.++|..+.+..+...+.+
T Consensus 67 ~~~~~y~~~----~wni~D~~~v~~~~i~~----~~~-----~~~~~lr~~RilR~lrl~~~~~~l~~l~~~l~~ 128 (229)
T 4dxw_A 67 KQKADFFKS----GWNIFDTVIVAISLIPI----PNN-----SSFLVLRLLRIFRVLRLISVIPELKQIIEAILE 128 (229)
T ss_dssp --------C----HHHHHHHHHHHHTTCC-----------------CCTTHHHHHHTTHHHHCHHHHHHHHHHHH
T ss_pred CchhHHhcC----CcHHHHHHHHHHHHhhc----Ccc-----HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 346788886 78888876443322111 000 000111244556666666666655444444443
Done!