RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14474
(550 letters)
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId:
9606]}
Length = 408
Score = 67.3 bits (163), Expect = 1e-12
Identities = 44/209 (21%), Positives = 72/209 (34%), Gaps = 19/209 (9%)
Query: 123 RGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNE 182
ET LH+ HT +A+ LL+ + V + + LH A +
Sbjct: 29 SNVKVETPLHMAARAG---HTEVAKYLLQNKAK-----VNAKAKDDQTPLHCAARIGHTN 80
Query: 183 LVADLIEAGANVTQRAIGSFFLPRD--------QQTPRPSRHTDYEGLAYLGEYPLSWAA 234
+V L+E AN + + G PL AA
Sbjct: 81 MVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAA 140
Query: 235 CCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNND 294
V LL++ A P+A G LH+ V ++ LD+ L S +
Sbjct: 141 KYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPR---GGSPHSPAWN 197
Query: 295 GFTPLTLSCQLGRADVFREMLELSCKEFW 323
G+TPL ++ + + +V R +L+
Sbjct: 198 GYTPLHIAAKQNQVEVARSLLQYGGSANA 226
Score = 59.6 bits (143), Expect = 4e-10
Identities = 20/102 (19%), Positives = 39/102 (38%), Gaps = 3/102 (2%)
Query: 229 PLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASN 288
PL A+ + + L+ GA P+ + LHM ++ Y L++ A
Sbjct: 3 PLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQN---KAKV 59
Query: 289 GILNNDGFTPLTLSCQLGRADVFREMLELSCKEFWRYSNITC 330
D TPL + ++G ++ + +LE + +
Sbjct: 60 NAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHT 101
Score = 56.5 bits (135), Expect = 3e-09
Identities = 33/176 (18%), Positives = 54/176 (30%), Gaps = 55/176 (31%)
Query: 171 ALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPL 230
LH+A + +V +L++ GA+ + + E PL
Sbjct: 3 PLHVASFMGHLPIVKNLLQRGASPNVS--------------------NVK-----VETPL 37
Query: 231 SWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTP----- 285
AA + V L+ + A +AK LH +M L + P
Sbjct: 38 HMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATT 97
Query: 286 -------------------------ASNGILNNDGFTPLTLSCQLGRADVFREMLE 316
AS + GFTPL ++ + G+ V +LE
Sbjct: 98 AGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLE 153
Score = 51.5 bits (122), Expect = 1e-07
Identities = 30/172 (17%), Positives = 49/172 (28%), Gaps = 16/172 (9%)
Query: 111 WRDHEACWQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGAS 170
+ G T LH+ L + ++ G +
Sbjct: 215 RSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKS--------GLT 266
Query: 171 ALHLAIAYANNELVADLIEAGANV--------TQRAIGSFFLPRDQQTPRPSRHTDYEGL 222
LHL + + LI+ G V T + S + D
Sbjct: 267 PLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAK 326
Query: 223 AYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDM 274
LG PL AA + + LL+ +GA P+ S G L + + +
Sbjct: 327 TKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISV 378
Score = 50.0 bits (118), Expect = 5e-07
Identities = 38/244 (15%), Positives = 72/244 (29%), Gaps = 43/244 (17%)
Query: 111 WRDHEACWQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGAS 170
+ + + + L + R+A LL+ G +
Sbjct: 113 ETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAH-----PNAAGKNGLT 167
Query: 171 ALHLAIAYANNELVADLIEAGANVTQRA--------IGSFFLPRDQQTPRPSRHTDYEGL 222
LH+A+ + N ++V L+ G + A I + +
Sbjct: 168 PLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAE 227
Query: 223 AYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRH- 281
+ G PL AA + + LL+ A + + G LH+V + + ++H
Sbjct: 228 SVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHG 287
Query: 282 ---------PKTP--------------------ASNGILNNDGFTPLTLSCQLGRADVFR 312
TP A G++PL + Q G D+
Sbjct: 288 VMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVT 347
Query: 313 EMLE 316
+L+
Sbjct: 348 LLLK 351
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human
(Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 65.4 bits (158), Expect = 2e-12
Identities = 39/209 (18%), Positives = 65/209 (31%), Gaps = 26/209 (12%)
Query: 111 WRDHEACWQMQYRGSLGETLLH--VLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLG 168
+ G T + L R R +++ E G
Sbjct: 89 KLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGG 148
Query: 169 ASALHLAIAYANNELVADLI-EAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGE 227
A+AL A + E++ L+ E GA+V D G L
Sbjct: 149 ATALMDAAEKGHVEVLKILLDEMGADVN--------------------ACDNMGRNALIH 188
Query: 228 YPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPAS 287
LS E++ +LL+D GA + + G L + V L + L
Sbjct: 189 ALLSSDDSD-VEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEH--IE 245
Query: 288 NGILNNDGFTPLTLSCQLGRADVFREMLE 316
++DG T L L+ +L + + +
Sbjct: 246 INDTDSDGKTALLLAVELKLKKIAELLCK 274
Score = 43.8 bits (102), Expect = 2e-05
Identities = 33/169 (19%), Positives = 52/169 (30%), Gaps = 28/169 (16%)
Query: 170 SALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTP---------------RPS 214
L A+ + +LV L+E GANV + TP
Sbjct: 7 HLLIKAVQNEDVDLVQQLLEGGANVNFQE------EEGGWTPLHNAVQMSREDIVELLLR 60
Query: 215 RHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDM 274
D G P AA + + L + GA + D +G V K+
Sbjct: 61 HGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKA 120
Query: 275 FGYALRHP-------KTPASNGILNNDGFTPLTLSCQLGRADVFREMLE 316
+ + KT L G T L + + G +V + +L+
Sbjct: 121 LKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLD 169
Score = 41.5 bits (96), Expect = 1e-04
Identities = 18/90 (20%), Positives = 27/90 (30%), Gaps = 26/90 (28%)
Query: 168 GASALHLAIAYANNELVADLIE-AGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLG 226
G + L LA+ + LV L+E + D +G
Sbjct: 219 GKTPLILAVEKKHLGLVQRLLEQEHIEINDT--------------------DSDG----- 253
Query: 227 EYPLSWAACCSNESVYNLLIDSGAIPDAKD 256
+ L A + + LL GA D D
Sbjct: 254 KTALLLAVELKLKKIAELLCKRGASTDCGD 283
Score = 33.8 bits (76), Expect = 0.040
Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Query: 226 GEYPLSWAACCSNESVYNLLIDSGAIPDAKDS-FGNMILHMVVVNDKLDMFGYALRH 281
+ L A + + L++ GA + ++ G LH V + D+ LRH
Sbjct: 5 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH 61
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 50.0 bits (118), Expect = 3e-07
Identities = 24/174 (13%), Positives = 48/174 (27%), Gaps = 25/174 (14%)
Query: 168 GASALHLAIAYANNELVADLIEAGANVTQ--RAIGSFFLPRDQQTPRPSRHTDYEGLAYL 225
G + LH + AN ELV L++ G+N S + + T L YL
Sbjct: 107 GNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYL 166
Query: 226 GEY----------PLSWAA-------------CCSNESVYNLLIDSGAIPDAKDSFGNMI 262
L + + ++ + +
Sbjct: 167 YPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESK 226
Query: 263 LHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLE 316
+ K + +++G T L ++ +LG + +L+
Sbjct: 227 PNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLD 280
Score = 38.9 bits (89), Expect = 0.001
Identities = 18/133 (13%), Positives = 40/133 (30%), Gaps = 18/133 (13%)
Query: 170 SALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYP 229
+ LH I + + + ++ I ++ + E
Sbjct: 179 TILHHIIITSGMTGCSAAAKYYLDILMGWIVK------------KQNRPIQSGTNEKESK 226
Query: 230 LSWAACCSNESVYNLLI---DSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPA 286
+ +S+ L + +A+DS G+ L++ + + L + A
Sbjct: 227 PNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDY---GA 283
Query: 287 SNGILNNDGFTPL 299
I N G P+
Sbjct: 284 DPFIANKSGLRPV 296
Score = 38.9 bits (89), Expect = 0.001
Identities = 21/155 (13%), Positives = 50/155 (32%), Gaps = 7/155 (4%)
Query: 110 KWRDHEACWQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGA 169
++++ L L+ + T LH + + + ++ ++
Sbjct: 150 SVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIV 209
Query: 170 SALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYP 229
+ I NE + + + + L ++ ++ G+
Sbjct: 210 KKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSN-------GDTC 262
Query: 230 LSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILH 264
L+ AA N S+ + L+D GA P + G +
Sbjct: 263 LNIAARLGNISIVDALLDYGADPFIANKSGLRPVD 297
Score = 32.3 bits (72), Expect = 0.14
Identities = 13/81 (16%), Positives = 28/81 (34%), Gaps = 4/81 (4%)
Query: 237 SNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPAS-NGILNNDG 295
E +L DS S H+ + ++ P T + N ++ G
Sbjct: 51 IQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEV---NDAFPNTQLNLNIPVDEHG 107
Query: 296 FTPLTLSCQLGRADVFREMLE 316
TPL + ++ + +++
Sbjct: 108 NTPLHWLTSIANLELVKHLVK 128
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo
sapiens) [TaxId: 9606]}
Length = 156
Score = 45.6 bits (106), Expect = 2e-06
Identities = 25/157 (15%), Positives = 45/157 (28%), Gaps = 12/157 (7%)
Query: 168 GASALHLAIAYANNELVADLIEA-GANVTQR-------AIGSFFLPRDQQTPRPSRHTDY 219
L A A + + V L+ + F +
Sbjct: 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASP 61
Query: 220 EGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYAL 279
G P+ AA +L++ GA + D G + +H+ V + +
Sbjct: 62 NVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA 121
Query: 280 RHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLE 316
+ + G TPL L+ Q G D+ +
Sbjct: 122 AE----SDLHRRDARGLTPLELALQRGAQDLVDILQG 154
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Length = 223
Score = 44.6 bits (104), Expect = 1e-05
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 226 GEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTP 285
G PL +AA + + +L++ GA PDAKD + +H L M L + +
Sbjct: 103 GCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKAST 162
Query: 286 ASNGILNNDGFTPLTLSCQLGRADVFREMLE 316
I + +G TPL L+C R + + ++
Sbjct: 163 ---NIQDTEGNTPLHLACDEERVEEAKLLVS 190
Score = 43.8 bits (102), Expect = 2e-05
Identities = 25/163 (15%), Positives = 42/163 (25%), Gaps = 13/163 (7%)
Query: 111 WRDHEACWQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGAS 170
+ L I + + + LL + V G +
Sbjct: 51 EIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQ-----VNAVNQNGCT 105
Query: 171 ALHLAIAYANNELVADLIEAGANVTQR-AIGSFFLPRDQQTPRPSRHTDYEGLAY----- 224
LH A + +E+ L+E GAN + + + R
Sbjct: 106 PLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQ 165
Query: 225 --LGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHM 265
G PL A LL+ GA ++ L +
Sbjct: 166 DTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQV 208
Score = 32.6 bits (73), Expect = 0.077
Identities = 14/108 (12%), Positives = 29/108 (26%), Gaps = 30/108 (27%)
Query: 239 ESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTP------------- 285
E + ++ ++ D LH ++ + L+
Sbjct: 17 EELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHI 76
Query: 286 -----------------ASNGILNNDGFTPLTLSCQLGRADVFREMLE 316
A +N +G TPL + R ++ +LE
Sbjct: 77 AASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLE 124
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId:
9606]}
Length = 156
Score = 43.3 bits (100), Expect = 1e-05
Identities = 29/154 (18%), Positives = 52/154 (33%), Gaps = 9/154 (5%)
Query: 170 SALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYE-------GL 222
+ L A A + E + L++ NV + + + P
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62
Query: 223 AYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHP 282
G + AA L++ A + +D+ GN+ LH+ L + +
Sbjct: 63 DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEF--LVK 120
Query: 283 KTPASNGILNNDGFTPLTLSCQLGRADVFREMLE 316
T ++ G N+ G T L+ GR +V M
Sbjct: 121 HTASNVGHRNHKGDTACDLARLYGRNEVVSLMQA 154
Score = 28.3 bits (61), Expect = 1.6
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 168 GASALHLAIAYANNELVADLIEAG 191
G +A LA Y NE+V+ + G
Sbjct: 133 GDTACDLARLYGRNEVVSLMQANG 156
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 221
Score = 43.7 bits (101), Expect = 2e-05
Identities = 34/209 (16%), Positives = 68/209 (32%), Gaps = 22/209 (10%)
Query: 127 GETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVAD 186
G++ LH+ II + L +++ + + LHLA+ E+
Sbjct: 2 GDSFLHLAIIHE---EKALTMEVIRQVKGDLAFLNFQNNL-QQTPLHLAVITNQPEIAEA 57
Query: 187 LIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYL--------------GEYPLSW 232
L+ AG + R + G L
Sbjct: 58 LLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHL 117
Query: 233 AACCSNESVYNLLIDSGAIPDAKDSF-GNMILHMVVVNDKLDMFGYALRHPKTPASNGIL 291
A+ + LL+ GA +A++ G LH+ V D+ L+ A +
Sbjct: 118 ASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCG---ADVNRV 174
Query: 292 NNDGFTPLTLSCQLGRADVFREMLELSCK 320
G++P L+ + +++ +L+ +
Sbjct: 175 TYQGYSPYQLTWGRPSTRIQQQLGQLTLE 203
Score = 27.9 bits (60), Expect = 3.0
Identities = 5/24 (20%), Positives = 10/24 (41%)
Query: 294 DGFTPLTLSCQLGRADVFREMLEL 317
DG + L L+ + E++
Sbjct: 1 DGDSFLHLAIIHEEKALTMEVIRQ 24
Score = 27.2 bits (58), Expect = 4.4
Identities = 19/95 (20%), Positives = 34/95 (35%), Gaps = 30/95 (31%)
Query: 168 GASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGE 227
G +ALHLA+ N +LV+ L++ GA+V + Y+G
Sbjct: 145 GRTALHLAVDLQNPDLVSLLLKCGADVNRV--------------------TYQG-----Y 179
Query: 228 YPLSWAACCSNESVYNLLIDSGA-----IPDAKDS 257
P + + L +P+++D
Sbjct: 180 SPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDE 214
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 153
Score = 42.5 bits (98), Expect = 2e-05
Identities = 28/153 (18%), Positives = 51/153 (33%), Gaps = 11/153 (7%)
Query: 171 ALHLAIAYANNELVADLIEAGANVTQRAIG-------SFFLPRDQQTPRPSRHTDYEGLA 223
L A ++ V L+ GA T +G + + +
Sbjct: 5 KLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDART 64
Query: 224 YLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPK 283
+ PL AA + ++ +L+ GA +AKD LH ++ ++ K
Sbjct: 65 KVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVEL---LIK 121
Query: 284 TPASNGILNNDGFTPLTLSCQLGRADVFREMLE 316
A + T +S G D+ E+L+
Sbjct: 122 YGADVHTQSKFCKTAFDISIDNGNEDLA-EILQ 153
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans
[TaxId: 6239]}
Length = 277
Score = 42.8 bits (99), Expect = 5e-05
Identities = 13/55 (23%), Positives = 22/55 (40%)
Query: 226 GEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALR 280
G+ P+ AA V LI GA +A D+ + + N+ ++ R
Sbjct: 221 GKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDR 275
Score = 40.5 bits (93), Expect = 3e-04
Identities = 17/92 (18%), Positives = 38/92 (41%), Gaps = 5/92 (5%)
Query: 226 GEYPLSWAACCSNES-VYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKT 284
G L +AA SN V L+ + G+ D +D G + + ++++ Y ++
Sbjct: 187 GRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQG-- 244
Query: 285 PASNGILNNDGFTPLTLSCQLGRADVFREMLE 316
AS ++ T L+ ++ ++ +
Sbjct: 245 -ASVEAVDATDHTARQLAQANNHHNIV-DIFD 274
Score = 33.2 bits (74), Expect = 0.073
Identities = 12/79 (15%), Positives = 23/79 (29%), Gaps = 25/79 (31%)
Query: 168 GASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGE 227
G + + LA E+V LI+ GA+V D
Sbjct: 221 GKTPIMLAAQEGRIEVVMYLIQQGASVEAV--------------------DAT-----DH 255
Query: 228 YPLSWAACCSNESVYNLLI 246
A ++ ++ ++
Sbjct: 256 TARQLAQANNHHNIVDIFD 274
Score = 31.6 bits (70), Expect = 0.22
Identities = 38/252 (15%), Positives = 69/252 (27%), Gaps = 73/252 (28%)
Query: 128 ETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVADL 187
E+ + LHT A + P + V + + LH + ++ E DL
Sbjct: 1 ESPIK--------LHTEAAGSYAITEPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDL 52
Query: 188 --------IEAGANV--------TQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLS 231
I AGA+V T + R D L
Sbjct: 53 IVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALH 112
Query: 232 WAACCSNESVYNLLIDSGAI---------------------------------------- 251
AA + + +++S +
Sbjct: 113 QAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKV 172
Query: 252 -------PDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQ 304
D++ G LH + + Y + ++ + DG TP+ L+ Q
Sbjct: 173 DYDGAARKDSEKYKGRTALHYAAQVSNMPIVKY--LVGEKGSNKDKQDEDGKTPIMLAAQ 230
Query: 305 LGRADVFREMLE 316
GR +V +++
Sbjct: 231 EGRIEVVMYLIQ 242
Score = 28.5 bits (62), Expect = 1.8
Identities = 7/35 (20%), Positives = 11/35 (31%)
Query: 288 NGILNNDGFTPLTLSCQLGRADVFREMLELSCKEF 322
N I T L A+ +++ KE
Sbjct: 26 NIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKEC 60
Score = 27.8 bits (60), Expect = 3.8
Identities = 12/81 (14%), Positives = 25/81 (30%), Gaps = 8/81 (9%)
Query: 110 KWRDHEACWQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGA 169
K+ E + G+T + + + L++ VE +
Sbjct: 204 KYLVGEKGSNKDKQDEDGKTPIMLAAQEG---RIEVVMYLIQQGAS-----VEAVDATDH 255
Query: 170 SALHLAIAYANNELVADLIEA 190
+A LA A ++ +V
Sbjct: 256 TARQLAQANNHHNIVDIFDRC 276
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 154
Score = 40.7 bits (94), Expect = 8e-05
Identities = 23/149 (15%), Positives = 47/149 (31%), Gaps = 25/149 (16%)
Query: 171 ALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPL 230
+L A+ + + G ++T+ P + E L
Sbjct: 9 SLCEAVKTRDIFGLLQAYADGVDLTE--------------KIPLANGHEPD-----ETAL 49
Query: 231 SWAACCSNES---VYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPAS 287
A + + + + L+ + D + G+ LH + D + + AS
Sbjct: 50 HLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKL---LLRGKAS 106
Query: 288 NGILNNDGFTPLTLSCQLGRADVFREMLE 316
I N G TPL ++ +L + +
Sbjct: 107 IEIANESGETPLDIAKRLKHEHCEELLTQ 135
Score = 31.9 bits (71), Expect = 0.084
Identities = 16/94 (17%), Positives = 29/94 (30%), Gaps = 11/94 (11%)
Query: 168 GASALHLAIAYANN---ELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLA- 223
+ALHLA+ + +V L++ N+ ++ +
Sbjct: 45 DETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGK 104
Query: 224 -------YLGEYPLSWAACCSNESVYNLLIDSGA 250
GE PL A +E LL + +
Sbjct: 105 ASIEIANESGETPLDIAKRLKHEHCEELLTQALS 138
Score = 29.9 bits (66), Expect = 0.43
Identities = 5/26 (19%), Positives = 10/26 (38%)
Query: 168 GASALHLAIAYANNELVADLIEAGAN 193
G + L +A + L +A +
Sbjct: 114 GETPLDIAKRLKHEHCEELLTQALSG 139
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1,
MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 291
Score = 42.0 bits (97), Expect = 1e-04
Identities = 27/155 (17%), Positives = 45/155 (29%), Gaps = 25/155 (16%)
Query: 111 WRDHEACWQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGAS 170
D M+ V I K R+ + + G +
Sbjct: 142 PLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGT 201
Query: 171 ALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPL 230
ALH+A A E++ LI+A +V + Y G PL
Sbjct: 202 ALHVAAAKGYTEVLKLLIQARYDVNIKD-------------------------YDGWTPL 236
Query: 231 SWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHM 265
AA E +L+++ +A + G +
Sbjct: 237 HAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDV 271
Score = 36.2 bits (82), Expect = 0.007
Identities = 17/79 (21%), Positives = 26/79 (32%), Gaps = 3/79 (3%)
Query: 226 GEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTP 285
G L AA V LLI + + KD G LH K + + +
Sbjct: 199 GGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENL--- 255
Query: 286 ASNGILNNDGFTPLTLSCQ 304
+N G T ++ +
Sbjct: 256 CDMEAVNKVGQTAFDVADE 274
Score = 35.9 bits (81), Expect = 0.011
Identities = 11/71 (15%), Positives = 24/71 (33%)
Query: 212 RPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDK 271
P + + A + L++ GA + + G LH ++D
Sbjct: 26 PPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDN 85
Query: 272 LDMFGYALRHP 282
+DM + + +
Sbjct: 86 VDMVKFLVENG 96
Score = 32.8 bits (73), Expect = 0.10
Identities = 23/116 (19%), Positives = 36/116 (31%), Gaps = 8/116 (6%)
Query: 168 GASALHLAIAYANNELVADLIEAGANV--------TQRAIGSFFLPRDQQTPRPSRHTDY 219
+ A + + E V L+E GA++ T D +
Sbjct: 40 DGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANI 99
Query: 220 EGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMF 275
G PL AA C + LI GA A +S G+ L + ++
Sbjct: 100 NQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELL 155
Score = 32.0 bits (71), Expect = 0.16
Identities = 13/89 (14%), Positives = 24/89 (26%), Gaps = 3/89 (3%)
Query: 228 YPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPAS 287
L G LH+ ++ +
Sbjct: 168 AARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKL---LIQARYD 224
Query: 288 NGILNNDGFTPLTLSCQLGRADVFREMLE 316
I + DG+TPL + G+ + R ++E
Sbjct: 225 VNIKDYDGWTPLHAAAHWGKEEACRILVE 253
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416
{Legionella pneumophila [TaxId: 446]}
Length = 346
Score = 41.8 bits (97), Expect = 2e-04
Identities = 29/220 (13%), Positives = 51/220 (23%), Gaps = 35/220 (15%)
Query: 127 GETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYANNELVAD 186
+ H + L + P +++ + A LA + ++
Sbjct: 126 NYQAFRLAAENG---HLHVLNRLCELAP---TEIMAMIQAENYHAFRLAAENGHLHVLNR 179
Query: 187 LIEAGANVTQRAIGS--------------------FFLPRDQQTPRPSRHTDYEGLAYLG 226
L E I + F L H G Y+
Sbjct: 180 LCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVN 239
Query: 227 EYPLSWAACCSNESVYNLLIDSGAIPDAKD-------SFGNMILHMVVVNDKLDMFGYAL 279
+ L + + D + L LD + L
Sbjct: 240 PFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLL 299
Query: 280 RHP--KTPASNGILNNDGFTPLTLSCQLGRADVFREMLEL 317
P K A + D L L+ +LG +L +
Sbjct: 300 SIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSI 339
Score = 38.3 bits (88), Expect = 0.002
Identities = 23/157 (14%), Positives = 44/157 (28%), Gaps = 20/157 (12%)
Query: 170 SALHLAIAYANN--ELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGE 227
A+H+ + N ++ L A+ + A + +D E
Sbjct: 46 EAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLW--------------SDAHKKGIKSE 91
Query: 228 YPLSWAACCSNESV---YNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKT 284
AA S LL+ S I + + N L +
Sbjct: 92 VICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCEL-AP 150
Query: 285 PASNGILNNDGFTPLTLSCQLGRADVFREMLELSCKE 321
++ + + L+ + G V + EL+ E
Sbjct: 151 TEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTE 187
Score = 30.6 bits (68), Expect = 0.46
Identities = 16/129 (12%), Positives = 30/129 (23%), Gaps = 24/129 (18%)
Query: 127 GETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEE----YLGASALHLAIAYANNE 182
GE ++ I + P D+V E + L +
Sbjct: 234 GEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLD 293
Query: 183 LVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNESVY 242
+ L+ + +P D L A N+
Sbjct: 294 DIRFLLSIPGIKALAPTAT--IPGDANEL------------------LRLALRLGNQGAC 333
Query: 243 NLLIDSGAI 251
LL+ ++
Sbjct: 334 ALLLSIPSV 342
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor
I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId:
10090]}
Length = 255
Score = 40.8 bits (94), Expect = 2e-04
Identities = 26/189 (13%), Positives = 43/189 (22%), Gaps = 18/189 (9%)
Query: 111 WRDHEACWQMQYRGSLGETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEG------- 163
+ L + A LL+ P +D +
Sbjct: 59 STVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQD 118
Query: 164 --EEYLGASALHLAIAYANNELVADLIEAGANV--------TQRAIGSFFLPRDQQTPRP 213
+ A A + NE + + T + +
Sbjct: 119 CTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLR 178
Query: 214 SRHTDYEGLAYLGEY-PLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKL 272
D PL A SV LL+ +GA P A+ G L ++
Sbjct: 179 DAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNP 238
Query: 273 DMFGYALRH 281
+ H
Sbjct: 239 ILARLLRAH 247
Score = 37.4 bits (85), Expect = 0.003
Identities = 13/76 (17%), Positives = 23/76 (30%)
Query: 255 KDSFGNMILHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREM 314
G+ LH+ V++ + L + N+ G T L L+ LG A ++
Sbjct: 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKL 64
Query: 315 LELSCKEFWRYSNITC 330
Sbjct: 65 YAAGAGVLVAERGGHT 80
Score = 35.8 bits (81), Expect = 0.009
Identities = 20/178 (11%), Positives = 39/178 (21%), Gaps = 19/178 (10%)
Query: 168 GASALHLAIAYANNELVADLIEAGANVTQRAIGSFFLPRDQQTP---------------R 212
G +ALHLA+ + + + L+ A + + QT
Sbjct: 9 GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQN----DLGQTALHLAAILGEASTVEKL 64
Query: 213 PSRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKL 272
+ G L A + +L+ S + D
Sbjct: 65 YAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTS 124
Query: 273 DMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLELSCKEFWRYSNITC 330
P + D L G + ++ + +
Sbjct: 125 HAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGA 182
Score = 32.8 bits (73), Expect = 0.093
Identities = 18/77 (23%), Positives = 26/77 (33%), Gaps = 26/77 (33%)
Query: 180 NNELVADLIEAGANVTQRAIGSFFLPRDQQTPRPSRHTDYEGLAYLGEYPLSWAACCSNE 239
++ L++AGA+ T R Y G PL A N
Sbjct: 204 AASVLELLLKAGADPTAR--------------------MYGG-----RTPLGSALLRPNP 238
Query: 240 SVYNLLIDSGAIPDAKD 256
+ LL GA P+ +D
Sbjct: 239 ILARLLRAHGA-PEPED 254
Score = 32.0 bits (71), Expect = 0.16
Identities = 34/259 (13%), Positives = 61/259 (23%), Gaps = 80/259 (30%)
Query: 127 GETLLHVLIICDTKLHTRLARTLLKCFPRLSQDVVEGEEYLGASALHLAIAYAN------ 180
G+T LH+ +I H LL + ++ + LG +ALHLA
Sbjct: 9 GDTALHLAVIHQ---HEPFLDFLLGF--SAGHEYLDLQNDLGQTALHLAAILGEASTVEK 63
Query: 181 ---------------------------NELVADLIEAGANVTQRAIGSFFLPRDQQTPRP 213
+ L++ + + A ++ TP
Sbjct: 64 LYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDT 123
Query: 214 SRHTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLD 273
S + D +A++ G+ LH+ V++ +
Sbjct: 124 SHAP-----------AAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAE 172
Query: 274 MFGYALRHPKTP-------------------------------ASNGILNNDGFTPLTLS 302
M A G TPL +
Sbjct: 173 MVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSA 232
Query: 303 CQLGRADVFREMLELSCKE 321
+ R + E
Sbjct: 233 LLRPNPILARLLRAHGAPE 251
Score = 29.3 bits (64), Expect = 1.0
Identities = 8/31 (25%), Positives = 11/31 (35%)
Query: 289 GILNNDGFTPLTLSCQLGRADVFREMLELSC 319
G + DG T L L+ +L S
Sbjct: 3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSA 33
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 39.8 bits (91), Expect = 4e-04
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Query: 228 YPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTPAS 287
PL A ++ S+ LL+ GA +A+ G+ LH L + +R A
Sbjct: 146 SPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSG---AD 202
Query: 288 NGILNNDGFTPLTLSCQLGRADVFR 312
+ + N TPL ++ D+ R
Sbjct: 203 SSLKNCHNDTPLMVARSRRVIDILR 227
Score = 39.4 bits (90), Expect = 6e-04
Identities = 10/49 (20%), Positives = 18/49 (36%)
Query: 226 GEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDM 274
G L A+ + L+ SGA K+ + L + +D+
Sbjct: 177 GSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDI 225
Score = 32.1 bits (71), Expect = 0.11
Identities = 11/61 (18%), Positives = 21/61 (34%), Gaps = 4/61 (6%)
Query: 226 GEYPLSWAACCSNESVYNLLID----SGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRH 281
G+ PL A N + L++ G D ++ LH+ V+ + +
Sbjct: 3 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTA 62
Query: 282 P 282
Sbjct: 63 G 63
Score = 28.3 bits (61), Expect = 1.9
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 294 DGFTPLTLSCQLGRADVFREMLEL 317
DG TPL ++ G ++ L
Sbjct: 2 DGDTPLHIAVVQGNLPAVHRLVNL 25
Score = 28.3 bits (61), Expect = 2.2
Identities = 8/34 (23%), Positives = 14/34 (41%), Gaps = 4/34 (11%)
Query: 168 GASALHLAIAYANNELVADLI----EAGANVTQR 197
G + LH+A+ N V L+ + G +
Sbjct: 3 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIY 36
Score = 26.7 bits (57), Expect = 7.3
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 168 GASALHLAIAYANNELVADLIEAGANVTQR 197
G+SALH A LV L+ +GA+ + +
Sbjct: 177 GSSALHSASGRGLLPLVRTLVRSGADSSLK 206
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 229
Score = 37.5 bits (85), Expect = 0.002
Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Query: 228 YPLSWAACCSN-ESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRH 281
YPL A + V LL ++ KD G + LH V ++ + L
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSK 56
Score = 30.2 bits (66), Expect = 0.48
Identities = 8/44 (18%), Positives = 14/44 (31%)
Query: 232 WAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMF 275
A ++ L+ GA D D+ G + + F
Sbjct: 179 ALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQVKKFF 222
Score = 29.4 bits (64), Expect = 1.0
Identities = 22/226 (9%), Positives = 53/226 (23%), Gaps = 15/226 (6%)
Query: 263 LHMVVVNDKLDMFGYALRHPKTPASNGILNNDGFTPLTLSCQLGRADVFREMLEL----- 317
LH + ++ L P+ + DG PL S ++ +L
Sbjct: 4 LHQACMENEFFKVQELLHSK--PSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61
Query: 318 ---SCKEFWRYSNITCSAYPLNALDTLLPDGRTNWNSALFIILNGTKEAHLDMLDGGIIQ 374
+ + + L D + T +
Sbjct: 62 LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS 121
Query: 375 RLLEEKWKTFAQRQFMKRLLILSLHLLFMSLAVYFRPTDRDEPLLGGTDWQSIARYCFEI 434
+ L E + + ++ + + + + +
Sbjct: 122 QFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALA 181
Query: 435 GTICGVVSYIIFQQGGEIK---NQGFSSFMKQLKNEPAKLIFLISN 477
++ + G E N+G + L + K ++N
Sbjct: 182 EGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQVKKF--FLNN 225
Score = 27.5 bits (59), Expect = 4.4
Identities = 6/28 (21%), Positives = 12/28 (42%), Gaps = 1/28 (3%)
Query: 171 ALHLAIAYANNELVADLIEA-GANVTQR 197
LH A V +L+ + + + Q+
Sbjct: 3 PLHQACMENEFFKVQELLHSKPSLLLQK 30
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 209
Score = 34.4 bits (77), Expect = 0.020
Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 4/91 (4%)
Query: 226 GEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMFGYALRHPKTP 285
G+ L WAA +N N+L+ A DA+D L + + L +
Sbjct: 123 GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNF--- 179
Query: 286 ASNGILNNDGFTPLTLSCQLGRADVFREMLE 316
A+ I ++ P ++ + D+ R +L+
Sbjct: 180 ANREITDHMDRLPRDVASERLHHDIVR-LLD 209
Score = 33.2 bits (74), Expect = 0.048
Identities = 11/59 (18%), Positives = 20/59 (33%)
Query: 216 HTDYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDM 274
H + + E PL AA + L+D+ A + D + + D+
Sbjct: 146 HANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDI 204
Score = 28.6 bits (62), Expect = 1.6
Identities = 9/43 (20%), Positives = 18/43 (41%)
Query: 288 NGILNNDGFTPLTLSCQLGRADVFREMLELSCKEFWRYSNITC 330
N ++ G T L L+ + RAD + +L+ + +
Sbjct: 16 NATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRT 58
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 31.6 bits (70), Expect = 0.089
Identities = 18/95 (18%), Positives = 28/95 (29%), Gaps = 8/95 (8%)
Query: 170 SALHLAIAYANNELVADLIEAGANV--------TQRAIGSFFLPRDQQTPRPSRHTDYEG 221
+ L + +LV +I + T + +
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62
Query: 222 LAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKD 256
G PL AA C+N V L++SGA A
Sbjct: 63 ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 97
>d2v4jb1 d.58.1.5 (B:209-277) DsrB insert domain {Desulfovibrio
vulgaris [TaxId: 881]}
Length = 69
Score = 28.9 bits (65), Expect = 0.25
Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 11/58 (18%)
Query: 218 DYEGLAYLGEYPLSWAACCSNESVYNLLIDSGAIPDAKDSFGNMILHMVVVNDKLDMF 275
D+E L E PL+ A+C + A+ K G+ ++ + + ++ M+
Sbjct: 6 DHEWTDQLCEIPLAVASC-----------PTAAVRPTKLEIGDKKVNTIAIKNERCMY 52
>d2h8pc1 f.14.1.1 (C:22-78) Potassium channel protein {Streptomyces
coelicolor [TaxId: 1902]}
Length = 57
Score = 26.0 bits (57), Expect = 2.4
Identities = 11/55 (20%), Positives = 17/55 (30%), Gaps = 6/55 (10%)
Query: 387 RQFMKRLLILSLHLLFMSLAVYFRPTDRDEPLLGGTDWQSIARYC-FEIGTICGV 440
R ++L + LL S +R P G + R + T V
Sbjct: 6 RAAGAATVLLVIVLLAGSYLAVL--AERGAP---GAQLITYPRALWWACETATTV 55
>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain
{Lactobacillus sp., strain 30a [TaxId: 1591]}
Length = 462
Score = 28.5 bits (62), Expect = 2.5
Identities = 13/71 (18%), Positives = 23/71 (32%), Gaps = 1/71 (1%)
Query: 187 LIEAGANVTQRAIGSFFLPRDQQ-TPRPSRHTDYEGLAYLGEYPLSWAACCSNESVYNLL 245
++ R + F P Q E + GE C ++ ++ +LL
Sbjct: 3 FFKSLKEYVSRYLIQFDCPGHQGGQYYRKHPAGREFYDFFGETVFRADLCNADVALGDLL 62
Query: 246 IDSGAIPDAKD 256
I G A+
Sbjct: 63 IHEGPAVAAEK 73
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 27.2 bits (58), Expect = 3.0
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 168 GASALHLAIAYANNELVADLIEAGAN 193
A L A A E V L+EAGAN
Sbjct: 3 SADWLATAAARGRVEEVRALLEAGAN 28
>d1uc2a_ d.261.1.1 (A:) Hypothetical protein PH1602 {Archaeon
Pyrococcus horikoshii [TaxId: 53953]}
Length = 480
Score = 27.3 bits (60), Expect = 4.8
Identities = 18/97 (18%), Positives = 33/97 (34%), Gaps = 9/97 (9%)
Query: 98 VEKVLSPLDPLSKWRDHEACWQMQYRGS--LGETLLHVLIICDTKLHTRLARTL----LK 151
V+K+ P + M + GS LG + + + + L
Sbjct: 209 VDKIFDPEVAKAYGLFEGQVVVMVHTGSRGLGHQVASDYLRIMERAIRKYRIPWPDRELV 268
Query: 152 CFPRLSQDVVEGEEYLGASALHLAIAYANNELVADLI 188
P S+ EG+ Y A A+AN +++ +
Sbjct: 269 SVPFQSE---EGQRYFSAMKAAANFAWANRQMITHWV 302
>d1rfsa_ b.33.1.1 (A:) ISP subunit from chloroplast cytochrome bf
complex {Spinach (Spinacia oleracea) [TaxId: 3562]}
Length = 127
Score = 26.1 bits (57), Expect = 6.0
Identities = 5/36 (13%), Positives = 14/36 (38%)
Query: 43 GELVDAYNIGGQVEVEKLIKEQFGVLMYNDGTGQVI 78
E + + G + + L + +++ +D T
Sbjct: 14 AEWLKTHAPGDRTLTQGLKGDPTYLVVESDKTLATF 49
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.139 0.428
Gapped
Lambda K H
0.267 0.0696 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,080,548
Number of extensions: 99094
Number of successful extensions: 301
Number of sequences better than 10.0: 1
Number of HSP's gapped: 241
Number of HSP's successfully gapped: 79
Length of query: 550
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 460
Effective length of database: 1,171,896
Effective search space: 539072160
Effective search space used: 539072160
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.0 bits)