RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy14475
         (169 letters)



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus),
           heart isoform t1 [TaxId: 9913]}
          Length = 292

 Score = 51.6 bits (122), Expect = 6e-09
 Identities = 35/179 (19%), Positives = 53/179 (29%), Gaps = 48/179 (26%)

Query: 12  HLVAGGIAGTTAAIVTCPLEVVKTRLQSSV--------------------------GIYQ 45
           +L +GG AG T+     PL+  +TRL + V                          G+YQ
Sbjct: 114 NLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQ 173

Query: 46  IQKMCVPPIASADNVTSQLTCKSMPYQRRRLNTQVLTISQFEPSSQSVHSTVRPSA---- 101
              + V  I         +   +        N  ++       +  +V   V        
Sbjct: 174 GFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVR 233

Query: 102 -----------------GVVQCLRYIVNHEGPKALFRGLVPNLIGVAPSRAIYFCAYSQ 143
                            G V C R I   EGPKA F+G   N++      A     Y +
Sbjct: 234 RRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGG-AFVLVLYDE 291



 Score = 48.2 bits (113), Expect = 8e-08
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 9  SFI-HLVAGGIAGTTAAIVTCPLEVVKTRLQSSVGIYQI 46
          SF+   +AGG+A   +     P+E VK  LQ      QI
Sbjct: 5  SFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQI 43


>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 170

 Score = 26.2 bits (57), Expect = 1.5
 Identities = 5/23 (21%), Positives = 9/23 (39%), Gaps = 2/23 (8%)

Query: 138 FCAYSQSKKFWNNILPPDTALVH 160
              +       N++L  D  L+H
Sbjct: 150 MVWFLCGP--ENSVLAQDKLLLH 170


>d1wbaa_ b.42.4.1 (A:) Winged bean albumin 1 {Goa bean
          (Psophocarpus tetragonolobus) [TaxId: 3891]}
          Length = 171

 Score = 24.9 bits (54), Expect = 5.1
 Identities = 7/35 (20%), Positives = 10/35 (28%)

Query: 9  SFIHLVAGGIAGTTAAIVTCPLEVVKTRLQSSVGI 43
          SF       +  T       PL +VK+        
Sbjct: 22 SFSDGAGIDVVATGNENPEDPLSIVKSTRNIMYAT 56


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.322    0.132    0.394 

Gapped
Lambda     K      H
   0.267   0.0604    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 565,030
Number of extensions: 22230
Number of successful extensions: 72
Number of sequences better than 10.0: 1
Number of HSP's gapped: 72
Number of HSP's successfully gapped: 8
Length of query: 169
Length of database: 2,407,596
Length adjustment: 79
Effective length of query: 90
Effective length of database: 1,322,926
Effective search space: 119063340
Effective search space used: 119063340
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 50 (23.3 bits)