BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14478
(206 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9HBA0|TRPV4_HUMAN Transient receptor potential cation channel subfamily V member 4
OS=Homo sapiens GN=TRPV4 PE=1 SV=2
Length = 871
Score = 64.3 bits (155), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 47/175 (26%)
Query: 9 AILIFAVPGSWFLLMFFAGAIRLTGPFVTMAFYFLYKG---------------------- 46
A+++FA+ W ++F ++LTG + M L+K
Sbjct: 576 AVMVFALVLGWMNALYFTRGLKLTGTYSIMIQKILFKDLFRFLLVYLLFMIGYASALVSL 635
Query: 47 ---------------------FPGVKTS-LYSSYLSTWMALFQITLGDYNYPELSYTVYP 84
+P + S +S++L + LF++T+G + LS T YP
Sbjct: 636 LNPCANMKVCNEDQTNCTVPTYPSCRDSETFSTFL---LDLFKLTIGMGDLEMLSSTKYP 692
Query: 85 TMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERA 139
+ I+ +++L +LLLNMLIA+MG T V ++S+ W QWA ++ +ER+
Sbjct: 693 VVFIILLVTYIILTFVLLLNMLIALMGETVGQVSKESKHIWKLQWATTILDIERS 747
>sp|Q9ERZ8|TRPV4_RAT Transient receptor potential cation channel subfamily V member 4
OS=Rattus norvegicus GN=Trpv4 PE=2 SV=1
Length = 871
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 47/175 (26%)
Query: 9 AILIFAVPGSWFLLMFFAGAIRLTGPFVTMAFYFLYK----------------------- 45
A+++FA+ W ++F ++LTG + M L+K
Sbjct: 576 AVMVFALVLGWMNALYFTRGLKLTGTYSIMIQKILFKDLFRFLLVYLLFMIGYASALVTL 635
Query: 46 --------------------GFPGVKTS-LYSSYLSTWMALFQITLGDYNYPELSYTVYP 84
+P + S +S++L + LF++T+G + LS YP
Sbjct: 636 LNPCTNMKVCNEDQSNCTVPSYPACRDSETFSAFL---LDLFKLTIGMGDLEMLSSAKYP 692
Query: 85 TMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERA 139
+ ++ +++L +LLLNMLIA+MG T V ++S+ W QWA ++ +ER+
Sbjct: 693 VVFILLLVTYIILTFVLLLNMLIALMGETVGQVSKESKHIWKLQWATTILDIERS 747
>sp|Q9EPK8|TRPV4_MOUSE Transient receptor potential cation channel subfamily V member 4
OS=Mus musculus GN=Trpv4 PE=1 SV=1
Length = 871
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 47/175 (26%)
Query: 9 AILIFAVPGSWFLLMFFAGAIRLTGPFVTMAFYFLYKG---------------------- 46
A+++FA+ W ++F ++LTG + M L+K
Sbjct: 576 AVMVFALVLGWMNALYFTRGLKLTGTYSIMIQKILFKDLFRFLLVYLLFMIGYASALVTL 635
Query: 47 ---------------------FPGVKTS-LYSSYLSTWMALFQITLGDYNYPELSYTVYP 84
+P + S +S++L + LF++T+G + LS YP
Sbjct: 636 LNPCTNMKVCDEDQSNCTVPTYPACRDSETFSAFL---LDLFKLTIGMGDLEMLSSAKYP 692
Query: 85 TMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERA 139
+ ++ +++L +LLLNMLIA+MG T V ++S+ W QWA ++ +ER+
Sbjct: 693 VVFILLLVTYIILTFVLLLNMLIALMGETVGQVSKESKHIWKLQWATTILDIERS 747
>sp|Q8K424|TRPV3_MOUSE Transient receptor potential cation channel subfamily V member 3
OS=Mus musculus GN=Trpv3 PE=1 SV=2
Length = 791
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 52 TSLYSSYLSTWMALFQIT--LGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNMLIAM 109
S Y S+ + LF++T LGD N + S YP + + +++L +LLLNMLIA+
Sbjct: 619 CSSYGSFSDAVLELFKLTIGLGDLNIQQNS--TYPILFLFLLITYVILTFVLLLNMLIAL 676
Query: 110 MGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQ 142
MG T +V ++SE+ W Q A+ ++ E+ + +
Sbjct: 677 MGETVENVSKESERIWRLQRARTILEFEKMLPE 709
>sp|Q8NET8|TRPV3_HUMAN Transient receptor potential cation channel subfamily V member 3
OS=Homo sapiens GN=TRPV3 PE=1 SV=2
Length = 790
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 52 TSLYSSYLSTWMALFQIT--LGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNMLIAM 109
S Y S+ + LF++T LGD N + S YP + + +++L +LLLNMLIA+
Sbjct: 619 CSSYGSFSDAVLELFKLTIGLGDLNIQQNSK--YPILFLFLLITYVILTFVLLLNMLIAL 676
Query: 110 MGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQ 142
MG T +V ++SE+ W Q A+ ++ E+ + +
Sbjct: 677 MGETVENVSKESERIWRLQRARTILEFEKMLPE 709
>sp|Q9R186|TRPV6_RAT Transient receptor potential cation channel subfamily V member 6
OS=Rattus norvegicus GN=Trpv6 PE=1 SV=1
Length = 727
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 25/155 (16%)
Query: 13 FAVPGSWFLLMFFAGAIRLTGPFVTMAFYFLYKG---FPGVKTSLYSSYLSTWMALFQIT 69
FA+ W +M+FA ++ GPF M ++ F + + + S + +FQ
Sbjct: 455 FALVLGWCNVMYFARGFQMLGPFTIMIQKMIFGDLMRFCWLMAVVILGFASAFYIIFQTE 514
Query: 70 LGD-----YNYP-------ELSYTV----------YPTMSKIVFTVFMVLVPILLLNMLI 107
D Y+YP EL T+ P M I + F ++ +L+LN+LI
Sbjct: 515 DPDELGHFYDYPMALFSTFELFLTIIDGPANYDVDLPFMYSITYAAFAIIATLLMLNLLI 574
Query: 108 AMMGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQ 142
AMMG+T+ V + ++ W Q V LER + +
Sbjct: 575 AMMGDTHWRVAHERDELWRAQVVATTVMLERKLPR 609
>sp|Q9H1D0|TRPV6_HUMAN Transient receptor potential cation channel subfamily V member 6
OS=Homo sapiens GN=TRPV6 PE=1 SV=2
Length = 725
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 25/155 (16%)
Query: 13 FAVPGSWFLLMFFAGAIRLTGPFVTM-------------------------AFYFLYKGF 47
FA+ W +M+FA ++ GPF M AFY +++
Sbjct: 456 FALVLGWCNVMYFARGFQMLGPFTIMIQKMIFGDLMRFCWLMAVVILGFASAFYIIFQTE 515
Query: 48 PGVKTSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNMLI 107
+ + Y + F++ L + P P M I + F ++ +L+LN+LI
Sbjct: 516 DPEELGHFYDYPMALFSTFELFLTIIDGPANYNVDLPFMYSITYAAFAIIATLLMLNLLI 575
Query: 108 AMMGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQ 142
AMMG+T+ V + ++ W Q V LER + +
Sbjct: 576 AMMGDTHWRVAHERDELWRAQIVATTVMLERKLPR 610
>sp|Q9XSM3|TRPV5_RABIT Transient receptor potential cation channel subfamily V member 5
OS=Oryctolagus cuniculus GN=Trpv5 PE=1 SV=1
Length = 730
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 25/153 (16%)
Query: 11 LIFAVPGSWFLLMFFAGAIRLTGPFVTM-------------------------AFYFLYK 45
L FA+ W +M+FA ++ GPF M AF+ ++
Sbjct: 454 LSFALVLGWCSVMYFARGFQMLGPFTIMIQKMIFGDLMRFCWLMAVVILGFASAFHITFQ 513
Query: 46 GFPGVKTSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNM 105
+S Y + + F++ L + P P M I + F ++ +L+LN+
Sbjct: 514 TEDPNNLGEFSDYPTALFSTFELFLTIIDGPANYSVDLPFMYCITYAAFAIIATLLMLNL 573
Query: 106 LIAMMGNTYAHVIEQSEKEWMKQWAKIVVALER 138
IAMMG+T+ V ++ ++ W Q V LER
Sbjct: 574 FIAMMGDTHWRVAQERDELWRAQVVATTVMLER 606
>sp|P69744|TRPV5_MOUSE Transient receptor potential cation channel subfamily V member 5
OS=Mus musculus GN=Trpv5 PE=1 SV=2
Length = 723
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 25/145 (17%)
Query: 19 WFLLMFFAGAIRLTGPFVTM-------------------------AFYFLYKGFPGVKTS 53
W +M+FA ++ GPF M AFY +++
Sbjct: 455 WCSVMYFARGFQMLGPFTIMIQKMIFGDLLRFCWLMAMVILGFASAFYIIFQTEDPDNLG 514
Query: 54 LYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNT 113
+S Y + + F++ L + P P M + + F ++ +L+LN+ IAMMG+T
Sbjct: 515 EFSDYPTAMFSTFELFLTIIDGPANYRVDLPFMYSVTYATFAIIATLLMLNLFIAMMGDT 574
Query: 114 YAHVIEQSEKEWMKQWAKIVVALER 138
+ V ++ ++ W Q V LER
Sbjct: 575 HWRVAQERDELWRAQVVATTVMLER 599
>sp|Q91WD2|TRPV6_MOUSE Transient receptor potential cation channel subfamily V member 6
OS=Mus musculus GN=Trpv6 PE=1 SV=1
Length = 727
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 25/155 (16%)
Query: 13 FAVPGSWFLLMFFAGAIRLTGPFVTMAFYFLYKG---FPGVKTSLYSSYLSTWMALFQIT 69
FA+ W +M+FA ++ GPF M ++ F + + + S + +FQ
Sbjct: 455 FALVLGWCNVMYFARGFQMLGPFTIMIQKMIFGDLMRFCWLMAVVILGFASAFYIIFQTE 514
Query: 70 LGD-----YNYP-------ELSYTV----------YPTMSKIVFTVFMVLVPILLLNMLI 107
D Y+YP EL T+ P M + + F ++ +L+LN+LI
Sbjct: 515 DPDELGHFYDYPMALFSTFELFLTIIDGPANYDVDLPFMYSVTYAAFAIIATLLMLNLLI 574
Query: 108 AMMGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQ 142
AMMG+T+ V + ++ W Q V LER + +
Sbjct: 575 AMMGDTHWRVAHERDELWRAQVVATTVMLERKLPR 609
>sp|Q9NQA5|TRPV5_HUMAN Transient receptor potential cation channel subfamily V member 5
OS=Homo sapiens GN=TRPV5 PE=1 SV=2
Length = 729
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 25/155 (16%)
Query: 13 FAVPGSWFLLMFFAGAIRLTGPFVTMAFYFLYKG---FPGVKTSLYSSYLSTWMALFQI- 68
FA+ W +M+F ++ GPF M ++ F + + + S + +FQ
Sbjct: 456 FALVLGWCSVMYFTRGFQMLGPFTIMIQKMIFGDLMRFCWLMAVVILGFASAFYIIFQTE 515
Query: 69 ---TLGD-YNYPELSYTVY-----------------PTMSKIVFTVFMVLVPILLLNMLI 107
+LG Y+YP +T + P M IV F ++ +L+LN+ I
Sbjct: 516 DPTSLGQFYDYPMALFTTFELFLTVIDAPANYDVDLPFMFSIVNFAFAIIATLLMLNLFI 575
Query: 108 AMMGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQ 142
AMMG+T+ V ++ ++ W Q V LER + +
Sbjct: 576 AMMGDTHWRVAQERDELWRAQVVATTVMLERKLPR 610
>sp|Q9JIP0|TRPV5_RAT Transient receptor potential cation channel subfamily V member 5
OS=Rattus norvegicus GN=Trpv5 PE=2 SV=1
Length = 723
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 25/145 (17%)
Query: 19 WFLLMFFAGAIRLTGPFVTM-------------------------AFYFLYKGFPGVKTS 53
W +M+F+ ++ GPF M AFY +++
Sbjct: 455 WCSVMYFSRGFQMLGPFTIMIQKMIFGDLLRFCWLMAMVILGFASAFYIIFQTEDPESLG 514
Query: 54 LYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNT 113
+S Y + + F++ L + P P M + + F ++ +L+LN+ IAMMG+T
Sbjct: 515 EFSDYPTAMFSTFELFLTIIDGPANYSVDLPFMYHLTYFAFAIIATLLMLNLFIAMMGDT 574
Query: 114 YAHVIEQSEKEWMKQWAKIVVALER 138
+ V ++ ++ W Q V LER
Sbjct: 575 HWRVAQERDELWRAQVVATTVMLER 599
>sp|Q697L1|TRPV1_CANFA Transient receptor potential cation channel subfamily V member 1
OS=Canis familiaris GN=TRPV1 PE=2 SV=1
Length = 840
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 6/96 (6%)
Query: 48 PGVK--TSLYSSYLSTWMALFQIT--LGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLL 103
PG + S Y+S ST + LF+ T +GD + E +Y + + I+ +++L ILLL
Sbjct: 620 PGCRPPDSSYNSLYSTCLELFKFTIGMGDLEFTE-NYD-FKAVFIILLLAYVILTYILLL 677
Query: 104 NMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERA 139
NMLIA+MG T + ++S+ W Q A ++ E++
Sbjct: 678 NMLIALMGETVNKIAQESKNIWKLQRAITILDTEKS 713
>sp|Q6R5A3|TRPV1_CAVPO Transient receptor potential cation channel subfamily V member 1
OS=Cavia porcellus GN=Trpv1 PE=2 SV=1
Length = 839
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 48 PGVKT--SLYSSYLSTWMALFQIT--LGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLL 103
PG ++ + Y+S ST + LF+ T +GD + E +Y + + I+ +++L ILLL
Sbjct: 619 PGCRSAKNSYNSLYSTCLELFKFTIGMGDLEFTE-NYD-FKAVFIILLLAYVILTYILLL 676
Query: 104 NMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERA 139
NMLIA+MG T + ++S+ W Q A ++ E++
Sbjct: 677 NMLIALMGETVNKIAQESKNIWKLQRAITILDTEKS 712
>sp|Q6RX08|TRPV1_RABIT Transient receptor potential cation channel subfamily V member 1
OS=Oryctolagus cuniculus GN=Trpv1 PE=1 SV=1
Length = 842
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 58/100 (58%), Gaps = 7/100 (7%)
Query: 44 YKGFPGVKTS--LYSSYLSTWMALFQIT--LGDYNYPELSYTVYPTMSKIVFTVFMVLVP 99
++GF G ++S Y+S ST + LF+ T +GD + E +Y + + I+ +++L
Sbjct: 619 WRGF-GCRSSDSSYNSLYSTCLELFKFTIGMGDLEFTE-NYD-FKAVFIILLLAYVILTY 675
Query: 100 ILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERA 139
ILLLNMLIA+MG T + ++S+ W Q A ++ E+
Sbjct: 676 ILLLNMLIALMGETVNKIAQESKSIWKLQRAITILDTEKG 715
>sp|Q8NER1|TRPV1_HUMAN Transient receptor potential cation channel subfamily V member 1
OS=Homo sapiens GN=TRPV1 PE=1 SV=2
Length = 839
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 53 SLYSSYLSTWMALFQIT--LGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNMLIAMM 110
S Y+S ST + LF+ T +GD + E +Y + + I+ +++L ILLLNMLIA+M
Sbjct: 626 SSYNSLYSTCLELFKFTIGMGDLEFTE-NYD-FKAVFIILLLAYVILTYILLLNMLIALM 683
Query: 111 GNTYAHVIEQSEKEWMKQWAKIVVALERA 139
G T + ++S+ W Q A ++ E++
Sbjct: 684 GETVNKIAQESKNIWKLQRAITILDTEKS 712
>sp|O35433|TRPV1_RAT Transient receptor potential cation channel subfamily V member 1
OS=Rattus norvegicus GN=Trpv1 PE=1 SV=1
Length = 838
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Query: 55 YSSYLSTWMALFQIT--LGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGN 112
Y+S ST + LF+ T +GD + E +Y + + I+ +++L ILLLNMLIA+MG
Sbjct: 627 YNSLYSTCLELFKFTIGMGDLEFTE-NYD-FKAVFIILLLAYVILTYILLLNMLIALMGE 684
Query: 113 TYAHVIEQSEKEWMKQWAKIVVALERA 139
T + ++S+ W Q A ++ E++
Sbjct: 685 TVNKIAQESKNIWKLQRAITILDTEKS 711
>sp|Q704Y3|TRPV1_MOUSE Transient receptor potential cation channel subfamily V member 1
OS=Mus musculus GN=Trpv1 PE=1 SV=1
Length = 839
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Query: 55 YSSYLSTWMALFQIT--LGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGN 112
Y+S ST + LF+ T +GD + E +Y + + I+ +++L ILLLNMLIA+MG
Sbjct: 628 YNSLYSTCLELFKFTIGMGDLEFTE-NYD-FKAVFIILLLAYVILTYILLLNMLIALMGE 685
Query: 113 TYAHVIEQSEKEWMKQWAKIVVALERA 139
T + ++S+ W Q A ++ E++
Sbjct: 686 TVNKIAQESKNIWKLQRAITILDTEKS 712
>sp|P48994|TRPL_DROME Transient-receptor-potential-like protein OS=Drosophila
melanogaster GN=trpl PE=1 SV=2
Length = 1124
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 62 WMALFQITLGDYNYPEL-SYTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQ 120
W + + L D+ + SYT + + ++F + V+ I+LLN+LIAMM N+YA + E
Sbjct: 621 WASFGMVGLDDFELSGIKSYTRFWGL--LMFGSYSVINVIVLLNLLIAMMSNSYAMIDEH 678
Query: 121 SEKEW 125
S+ EW
Sbjct: 679 SDTEW 683
>sp|P19334|TRP_DROME Transient receptor potential protein OS=Drosophila melanogaster
GN=trp PE=1 SV=3
Length = 1275
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 89 IVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEW 125
++F + V+ I+LLNMLIAMM N+Y + E+++ EW
Sbjct: 640 LMFGSYSVINIIVLLNMLIAMMSNSYQIISERADTEW 676
>sp|Q9WVC5|TRPC7_MOUSE Short transient receptor potential channel 7 OS=Mus musculus
GN=Trpc7 PE=2 SV=1
Length = 862
Score = 39.3 bits (90), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 89 IVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKI 132
+++ V+ V + ++LLNMLIAM+ N+Y + E ++ EW AK+
Sbjct: 651 VLYGVYNVTMVVVLLNMLIAMINNSYQEIEEDADVEWKFARAKL 694
>sp|Q9HCX4|TRPC7_HUMAN Short transient receptor potential channel 7 OS=Homo sapiens
GN=TRPC7 PE=1 SV=1
Length = 862
Score = 38.9 bits (89), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 89 IVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKI 132
+++ V+ V + ++LLNMLIAM+ N+Y + E ++ EW AK+
Sbjct: 651 VLYGVYNVTMVVVLLNMLIAMINNSYQEIEEDADVEWKFARAKL 694
>sp|Q9QZC1|TRPC3_MOUSE Short transient receptor potential channel 3 OS=Mus musculus
GN=Trpc3 PE=2 SV=1
Length = 836
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
Query: 20 FLLMFFAGAIRLTGPFVTMAFYFLYKGFPGVKTSLYSSYLSTWMALFQITLGDYNYPELS 79
F+++F A I G F+ ++Y K P T++ S+ + + ++F ++ +
Sbjct: 572 FIMVFLAFMI---GMFILYSYYLGAKVNPAF-TTVEESFKTLFWSIFGLSEVTSVVLKYD 627
Query: 80 YTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEW 125
+ + +++ ++ V + ++LLNMLIAM+ ++Y + + S+ EW
Sbjct: 628 HKFIENIGYVLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDSDVEW 673
>sp|Q9JMI9|TRPC3_RAT Short transient receptor potential channel 3 OS=Rattus norvegicus
GN=Trpc3 PE=2 SV=3
Length = 836
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
Query: 20 FLLMFFAGAIRLTGPFVTMAFYFLYKGFPGVKTSLYSSYLSTWMALFQITLGDYNYPELS 79
F+++F A I G F+ ++Y K P T++ S+ + + ++F ++ +
Sbjct: 572 FIMVFLAFMI---GMFILYSYYLGAKVNPAF-TTVEESFKTLFWSIFGLSEVTSVVLKYD 627
Query: 80 YTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEW 125
+ + +++ ++ V + ++LLNMLIAM+ ++Y + + S+ EW
Sbjct: 628 HKFIENIGYVLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDSDVEW 673
>sp|Q13507|TRPC3_HUMAN Short transient receptor potential channel 3 OS=Homo sapiens
GN=TRPC3 PE=1 SV=3
Length = 836
Score = 38.1 bits (87), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
Query: 20 FLLMFFAGAIRLTGPFVTMAFYFLYKGFPGVKTSLYSSYLSTWMALFQITLGDYNYPELS 79
F+++FFA I G F+ ++Y K T++ S+ + + ++F ++ +
Sbjct: 572 FIMVFFAFMI---GMFILYSYYLGAK-VNAAFTTVEESFKTLFWSIFGLSEVTSVVLKYD 627
Query: 80 YTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEW 125
+ + +++ ++ V + ++LLNMLIAM+ ++Y + + S+ EW
Sbjct: 628 HKFIENIGYVLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDSDVEW 673
>sp|Q9U1S7|PKD2_CAEEL Polycystin-2 OS=Caenorhabditis elegans GN=pkd-2 PE=1 SV=3
Length = 716
Score = 38.1 bits (87), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 49 GVKTSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNMLIA 108
G + + YS+ ++ AL ++ LGD+N+ L + F ++ V +LLNM +A
Sbjct: 471 GTQIADYSNLYNSAFALLRLILGDFNFSALE-SCNRFFGPAFFIAYVFFVSFILLNMFLA 529
Query: 109 MMGNTYAHV 117
++ ++Y V
Sbjct: 530 IINDSYVEV 538
>sp|P34586|TRPL_CAEEL Transient-receptor-potential-like protein OS=Caenorhabditis elegans
GN=trp-1 PE=2 SV=3
Length = 1027
Score = 37.7 bits (86), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 48/91 (52%)
Query: 45 KGFPGVKTSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLN 104
K V +S+ SYL+ +LF IT + ++ + + + +F ++ I+LLN
Sbjct: 595 KHSSNVFSSIADSYLTLLWSLFSITKPEDTDVVENHKITQWVGQGMFIMYHCTSIIVLLN 654
Query: 105 MLIAMMGNTYAHVIEQSEKEWMKQWAKIVVA 135
MLIAMM +++ + + ++ EW K+ +A
Sbjct: 655 MLIAMMSHSFQIINDHADLEWKFHRTKLWMA 685
>sp|O75762|TRPA1_HUMAN Transient receptor potential cation channel subfamily A member 1
OS=Homo sapiens GN=TRPA1 PE=2 SV=3
Length = 1119
Score = 37.4 bits (85), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 55 YSSYLSTWMALFQITLGDYNYPE-------LSYTVYPTMSKIVFTVFMVLVPILLLNMLI 107
+SS L + + F + LGD NY E + +P +S F + VPI+L+N+LI
Sbjct: 898 FSSPLLSIIQTFSMMLGDINYRESFLEPYLRNELAHPVLSFAQLVSFTIFVPIVLMNLLI 957
Query: 108 AMMGNTYAHVIEQSEKEWMKQWAKIVVALERAV 140
+ A V + + + + ++ +LE+ +
Sbjct: 958 GLAVGDIAEVQKHASLKRIAMQVELHTSLEKKL 990
>sp|Q9QX29|TRPC5_MOUSE Short transient receptor potential channel 5 OS=Mus musculus
GN=Trpc5 PE=1 SV=2
Length = 975
Score = 37.0 bits (84), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 90 VFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEW 125
+F + V+ ++LLNMLIAMM N+Y + + ++ EW
Sbjct: 604 MFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEW 639
>sp|P79100|TRPC4_BOVIN Short transient receptor potential channel 4 OS=Bos taurus GN=TRPC4
PE=2 SV=2
Length = 979
Score = 37.0 bits (84), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 90 VFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEW 125
+F + V+ ++LLNMLIAMM N+Y + + ++ EW
Sbjct: 600 MFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEW 635
>sp|Q9UBN4|TRPC4_HUMAN Short transient receptor potential channel 4 OS=Homo sapiens
GN=TRPC4 PE=1 SV=1
Length = 977
Score = 37.0 bits (84), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 90 VFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEW 125
+F + V+ ++LLNMLIAMM N+Y + + ++ EW
Sbjct: 600 MFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEW 635
>sp|O62852|TRPC5_RABIT Short transient receptor potential channel 5 OS=Oryctolagus
cuniculus GN=TRPC5 PE=2 SV=1
Length = 974
Score = 37.0 bits (84), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 90 VFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEW 125
+F + V+ ++LLNMLIAMM N+Y + + ++ EW
Sbjct: 604 MFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEW 639
>sp|O35119|TRPC4_RAT Short transient receptor potential channel 4 OS=Rattus norvegicus
GN=Trpc4 PE=1 SV=2
Length = 977
Score = 37.0 bits (84), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 90 VFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEW 125
+F + V+ ++LLNMLIAMM N+Y + + ++ EW
Sbjct: 600 MFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEW 635
>sp|Q9QUQ5|TRPC4_MOUSE Short transient receptor potential channel 4 OS=Mus musculus
GN=Trpc4 PE=1 SV=1
Length = 974
Score = 37.0 bits (84), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 90 VFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEW 125
+F + V+ ++LLNMLIAMM N+Y + + ++ EW
Sbjct: 600 MFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEW 635
>sp|Q9UL62|TRPC5_HUMAN Short transient receptor potential channel 5 OS=Homo sapiens
GN=TRPC5 PE=1 SV=1
Length = 973
Score = 37.0 bits (84), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 90 VFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEW 125
+F + V+ ++LLNMLIAMM N+Y + + ++ EW
Sbjct: 604 MFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEW 639
>sp|Q7Z020|TRPA1_DROME Transient receptor potential cation channel subfamily A member 1
OS=Drosophila melanogaster GN=TrpA1 PE=2 SV=3
Length = 1296
Score = 37.0 bits (84), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 67/184 (36%), Gaps = 41/184 (22%)
Query: 18 SWFLLMFFAGAIRLTGPFVTM------------------------AFYFLYKGF--PGVK 51
SWF L+ F G +V M AFY L P
Sbjct: 1001 SWFRLLLFLQRFDQVGIYVVMFLEILQTLIKVLMVFSILIIAFGLAFYILLSKIIDPQPN 1060
Query: 52 TSLYSSYLSTWMALFQITLGDYNYPELSYTVY-------PTMSKIVFTVFMVLVPILLLN 104
+S+ + + F + LG+ ++ Y P S ++ +VFM+L+PILL+N
Sbjct: 1061 HLSFSNIPMSLLRTFSMMLGELDFVGTYVNTYYRDQLKVPMTSFLILSVFMILMPILLMN 1120
Query: 105 MLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERA--------VSQEDCHRYLQEYSIKL 156
+LI + V ++ + + + LER V + + Y E KL
Sbjct: 1121 LLIGLAVGDIESVRRNAQLKRLAMQVVLHTELERKLPHVWLQRVDKMELIEYPNETKCKL 1180
Query: 157 GPGD 160
G D
Sbjct: 1181 GFCD 1184
>sp|Q9R244|TRPC2_MOUSE Short transient receptor potential channel 2 OS=Mus musculus
GN=Trpc2 PE=2 SV=2
Length = 1172
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 29/40 (72%)
Query: 86 MSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEW 125
+ + ++ +F +++ I+LLNMLIAM+ N++ + + ++ EW
Sbjct: 896 VGRAMYGIFTIVMVIVLLNMLIAMITNSFQKIEDDADVEW 935
>sp|Q9R283|TRPC2_RAT Short transient receptor potential channel 2 OS=Rattus norvegicus
GN=Trpc2 PE=2 SV=2
Length = 1170
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 29/40 (72%)
Query: 86 MSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEW 125
+ + ++ +F +++ I+LLNMLIAM+ N++ + + ++ EW
Sbjct: 895 VGRAMYGIFTIVMVIVLLNMLIAMITNSFQKIEDDADVEW 934
>sp|O62826|TRPC2_BOVIN Short transient receptor potential channel 2 homolog OS=Bos taurus
GN=TRPC2 PE=2 SV=1
Length = 432
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 32/47 (68%)
Query: 86 MSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKI 132
+ + ++ +F +++ I+LLNMLIAM+ N++ + + ++ EW +K+
Sbjct: 158 VGRALYGIFTIVMVIVLLNMLIAMITNSFQKIEDAADVEWKFARSKL 204
>sp|Q6RI86|TRPA1_RAT Transient receptor potential cation channel subfamily A member 1
OS=Rattus norvegicus GN=Trpa1 PE=2 SV=1
Length = 1125
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 24/136 (17%)
Query: 21 LLMFFAGAIRLTGPFV------TMAFYFLYKGFPGVKTSLYSSYLSTWMALFQITLGDYN 74
L + F +R TG F+ ++FY L T L S + F + LGD N
Sbjct: 866 LEVIFKTLLRSTGVFIFLLLAFGLSFYVLLNFQDAFSTPLLS-----LIQTFSMMLGDIN 920
Query: 75 Y----------PELSYTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKE 124
Y EL+Y V I FT+F VPI+L+N+LI + A V + + +
Sbjct: 921 YRDAFLEPLFRNELAYPVLTFGQLIAFTMF---VPIVLMNLLIGLAVGDIAEVQKHASLK 977
Query: 125 WMKQWAKIVVALERAV 140
+ ++ LE+ +
Sbjct: 978 RIAMQVELHTNLEKKL 993
>sp|Q8BLA8|TRPA1_MOUSE Transient receptor potential cation channel subfamily A member 1
OS=Mus musculus GN=Trpa1 PE=1 SV=1
Length = 1125
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 24/136 (17%)
Query: 21 LLMFFAGAIRLTGPFV------TMAFYFLYKGFPGVKTSLYSSYLSTWMALFQITLGDYN 74
L + F +R TG F+ ++FY L T L S + F + LGD N
Sbjct: 866 LEVIFKTLLRSTGVFIFLLLAFGLSFYVLLNFQDAFSTPLLS-----LIQTFSMMLGDIN 920
Query: 75 Y----------PELSYTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKE 124
Y EL+Y V I FT+F VPI+L+N+LI + A V + + +
Sbjct: 921 YRDAFLEPLFRNELAYPVLTFGQLIAFTMF---VPIVLMNLLIGLAVGDIAEVQKHASLK 977
Query: 125 WMKQWAKIVVALERAV 140
+ ++ LE+ +
Sbjct: 978 RIAMQVELHTNLEKKL 993
>sp|Q61143|TRPC6_MOUSE Short transient receptor potential channel 6 OS=Mus musculus
GN=Trpc6 PE=1 SV=3
Length = 930
Score = 35.8 bits (81), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 38 MAFYFLYKGFPGVK-----TSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFT 92
+ + LY + G K T++ S+ + + A+F ++ ++ + +++
Sbjct: 649 IGMFNLYSYYIGAKQNEAFTTVEESFKTLFWAIFGLSEVKSVVINYNHKFIENIGYVLYG 708
Query: 93 VFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKI 132
V+ V + I+LLNMLIAM+ +++ + + ++ EW AK+
Sbjct: 709 VYNVTMVIVLLNMLIAMINSSFQEIEDDADVEWKFARAKL 748
>sp|Q9Y210|TRPC6_HUMAN Short transient receptor potential channel 6 OS=Homo sapiens
GN=TRPC6 PE=1 SV=1
Length = 931
Score = 35.4 bits (80), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 38 MAFYFLYKGFPGVK-----TSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFT 92
+ + LY + G K T++ S+ + + A+F ++ ++ + +++
Sbjct: 650 IGMFNLYSYYIGAKQNEAFTTVEESFKTLFWAIFGLSEVKSVVINYNHKFIENIGYVLYG 709
Query: 93 VFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKI 132
V+ V + I+LLNMLIAM+ +++ + + ++ EW AK+
Sbjct: 710 VYNVTMVIVLLNMLIAMINSSFQEIEDDADVEWKFARAKL 749
>sp|Q9NZM6|PK2L2_HUMAN Polycystic kidney disease 2-like 2 protein OS=Homo sapiens
GN=PKD2L2 PE=2 SV=2
Length = 624
Score = 35.4 bits (80), Expect = 0.27, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 49 GVKTSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNMLIA 108
G + +S++ ++ A F+I LGD+N+ + P + I F F+ V +LLNM +A
Sbjct: 430 GSQVDDFSTFQNSIFAQFRIVLGDFNFAGIQ-QANPILGPIYFITFIFFVFFVLLNMFLA 488
Query: 109 MMGNTYAHV 117
++ +TY+ V
Sbjct: 489 IINDTYSEV 497
>sp|Q9VJJ7|TRPG_DROME Transient receptor potential-gamma protein OS=Drosophila
melanogaster GN=trpgamma PE=1 SV=2
Length = 1128
Score = 35.4 bits (80), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 27/37 (72%)
Query: 89 IVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEW 125
++F + V+ ++LLN+LIAMM ++Y + E+++ EW
Sbjct: 631 LMFGTYSVINIVVLLNLLIAMMNHSYQLISERADVEW 667
>sp|Q93971|TRPG_CAEEL Transient receptor potential channel OS=Caenorhabditis elegans
GN=gon-2 PE=1 SV=4
Length = 2032
Score = 34.3 bits (77), Expect = 0.65, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 89 IVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALE 137
++ T F+++ ILL++MLIA+ + + E S++ W+ Q K V+ E
Sbjct: 1534 LLMTFFLLIANILLMSMLIAIFNHIFDATDEMSQQIWLFQRYKQVMEYE 1582
>sp|Q13563|PKD2_HUMAN Polycystin-2 OS=Homo sapiens GN=PKD2 PE=1 SV=3
Length = 968
Score = 33.9 bits (76), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 49 GVKTSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNMLIA 108
G + +S++ F+I LGD N+ E+ + I FT F+ + +LLNM +A
Sbjct: 620 GTQVDDFSTFQECIFTQFRIILGDINFAEIE-EANRVLGPIYFTTFVFFMFFILLNMFLA 678
Query: 109 MMGNTYAHV 117
++ +TY+ V
Sbjct: 679 IINDTYSEV 687
>sp|Q8R455|TRPM8_RAT Transient receptor potential cation channel subfamily M member 8
OS=Rattus norvegicus GN=Trpm8 PE=1 SV=4
Length = 1104
Score = 33.9 bits (76), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 14/81 (17%)
Query: 68 ITLGDYNYPELSYTVYPTMSKI-VFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEWM 126
+ L +YN P +P I + ++M+ ILL+N+L+AM G T V E +++ W
Sbjct: 941 VELDEYNLPR-----FPEWITIPLVCIYMLSTNILLVNLLVAMFGYTVGIVQENNDQVWK 995
Query: 127 KQWAKIVVALERAVSQEDCHR 147
Q +V QE C+R
Sbjct: 996 FQRYFLV--------QEYCNR 1008
>sp|Q12324|YVC1_YEAST Calcium channel YVC1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YVC1 PE=1 SV=2
Length = 675
Score = 33.9 bits (76), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 34/60 (56%)
Query: 84 PTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQE 143
P + I++ + +V ++LLN+LIA+ Y VI+ ++ E+M ++ + RA ++
Sbjct: 432 PPYAAILYYGYYFIVSVILLNILIALYSTAYQKVIDNADDEYMALMSQKTLRYIRAPDED 491
>sp|Q4GZT3|PKD2_BOVIN Polycystin-2 OS=Bos taurus GN=PKD2 PE=2 SV=1
Length = 970
Score = 33.9 bits (76), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 49 GVKTSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNMLIA 108
G + +S++ F+I LGD N+ E+ + I FT F+ + +LLNM +A
Sbjct: 622 GTQVDDFSTFQECIFTQFRIILGDINFAEIE-EANRVLGPIYFTTFVFFMFFILLNMFLA 680
Query: 109 MMGNTYAHV 117
++ +TY+ V
Sbjct: 681 IINDTYSEV 689
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,017,541
Number of Sequences: 539616
Number of extensions: 3102177
Number of successful extensions: 7033
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 6921
Number of HSP's gapped (non-prelim): 124
length of query: 206
length of database: 191,569,459
effective HSP length: 112
effective length of query: 94
effective length of database: 131,132,467
effective search space: 12326451898
effective search space used: 12326451898
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)