RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy14478
         (206 letters)



>d1lhpa_ c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) [TaxId:
           9940]}
          Length = 309

 Score = 26.7 bits (58), Expect = 2.1
 Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 2/64 (3%)

Query: 126 MKQWAKIVVALERAVS--QEDCHRYLQEYSIKLGPGDEPGTEQRGVLVIKSKTAPEEPAP 183
            K    + VA E+ VS       R ++    K G G +P   Q  + +++SK   E P  
Sbjct: 243 HKHPNNLKVACEKTVSAMHHVLQRTIKCAKAKSGEGVKPSPAQLELRMVQSKKDIESPEI 302

Query: 184 KFEA 187
             +A
Sbjct: 303 VVQA 306


>d3b45a1 f.51.1.1 (A:91-270) GlpG {Escherichia coli [TaxId: 562]}
          Length = 180

 Score = 26.2 bits (57), Expect = 2.6
 Identities = 9/102 (8%), Positives = 23/102 (22%), Gaps = 1/102 (0%)

Query: 17  GSWFLLMFFAGAIRLTGPFVTMAFYFLYKGFPGVKTSLYS-SYLSTWMALFQITLGDYNY 75
              +         +  G    +    +     G     +S  +      +    +G    
Sbjct: 64  NLLWWWYLGGAVEKRLGSGKLIVITLISALLSGYVQQKFSGPWFGGLSGVVYALMGYVWL 123

Query: 76  PELSYTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHV 117
                       +    +F ++  +     L  M     AH+
Sbjct: 124 RGERDPQSGIYLQRGLIIFALIWIVAGWFDLFGMSMANGAHI 165


>d2i6ea1 c.94.1.1 (A:16-287) Hypothetical protein DR0370
           {Deinococcus radiodurans [TaxId: 1299]}
          Length = 272

 Score = 25.0 bits (54), Expect = 6.3
 Identities = 8/70 (11%), Positives = 22/70 (31%), Gaps = 7/70 (10%)

Query: 118 IEQSEKEWMKQWAKIV--VALERAVSQEDCHRYLQEYSIKLGPGDEPGTEQRGVLVIKSK 175
           + ++ +  +   A++    A +  + +     YL  +   L        ++ G+      
Sbjct: 208 MREARRRGIGHLAEVSQRHAEKLGLPERVVQHYLWNFRYHLEA-----PDRLGLREFADL 262

Query: 176 TAPEEPAPKF 185
             P      F
Sbjct: 263 AVPGHAELTF 272


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.323    0.137    0.416 

Gapped
Lambda     K      H
   0.267   0.0522    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 776,214
Number of extensions: 33585
Number of successful extensions: 74
Number of sequences better than 10.0: 1
Number of HSP's gapped: 73
Number of HSP's successfully gapped: 7
Length of query: 206
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 125
Effective length of database: 1,295,466
Effective search space: 161933250
Effective search space used: 161933250
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 51 (23.9 bits)