Query psy14482
Match_columns 95
No_of_seqs 138 out of 1202
Neff 8.6
Searched_HMMs 29240
Date Fri Aug 16 20:58:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14482.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14482hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2d8q_A BLU protein, zinc finge 99.6 1.4E-15 4.7E-20 84.3 3.4 47 2-48 14-60 (70)
2 2dj8_A Protein CBFA2T1; zinc f 99.5 3.5E-15 1.2E-19 80.4 3.5 44 3-46 15-58 (60)
3 2od1_A Protein CBFA2T1; zinc f 99.5 4.4E-15 1.5E-19 80.0 3.7 45 2-46 12-56 (60)
4 2odd_A Protein CBFA2T1; MYND z 99.5 3.4E-15 1.2E-19 81.3 3.3 44 3-46 17-60 (64)
5 2jw6_A Deformed epidermal auto 99.5 6.4E-15 2.2E-19 77.1 3.4 43 2-44 8-50 (52)
6 3qww_A SET and MYND domain-con 98.9 3.6E-10 1.2E-14 80.8 1.5 45 3-47 49-95 (433)
7 3qwp_A SET and MYND domain-con 98.8 5.4E-10 1.8E-14 79.7 0.6 46 3-48 47-94 (429)
8 3n71_A Histone lysine methyltr 98.7 2.2E-09 7.5E-14 77.8 0.6 45 3-47 49-95 (490)
9 3n71_A Histone lysine methyltr 98.7 1.4E-08 4.9E-13 73.5 4.6 50 44-93 8-58 (490)
10 3qww_A SET and MYND domain-con 98.7 1.4E-08 4.6E-13 72.6 4.2 50 44-93 8-58 (433)
11 3qwp_A SET and MYND domain-con 98.7 1.9E-08 6.3E-13 71.7 4.3 49 45-93 7-56 (429)
12 2yqq_A Zinc finger HIT domain- 96.8 0.0011 3.8E-08 34.6 2.7 38 4-46 13-50 (56)
13 1x4s_A Protein FON, zinc finge 96.3 0.0019 6.6E-08 34.0 1.9 30 4-34 12-45 (59)
14 1n3j_A A612L, histone H3 lysin 95.3 0.015 5.3E-07 34.1 3.1 35 44-79 5-39 (119)
15 2odd_A Protein CBFA2T1; MYND z 94.1 0.015 5.2E-07 30.6 0.9 14 61-74 2-15 (64)
16 3f9x_A Histone-lysine N-methyl 93.6 0.095 3.3E-06 32.2 4.1 39 39-77 26-64 (166)
17 3ope_A Probable histone-lysine 93.5 0.042 1.5E-06 35.8 2.4 36 44-79 75-110 (222)
18 3ooi_A Histone-lysine N-methyl 92.6 0.056 1.9E-06 35.5 2.0 36 43-78 92-127 (232)
19 3h6l_A Histone-lysine N-methyl 92.1 0.1 3.4E-06 35.3 2.7 39 41-79 115-153 (278)
20 3hna_A Histone-lysine N-methyl 90.1 0.19 6.4E-06 34.1 2.6 36 43-78 147-182 (287)
21 3smt_A Histone-lysine N-methyl 89.0 0.29 9.9E-06 35.5 3.1 40 31-70 80-120 (497)
22 1wvo_A Sialic acid synthase; a 87.9 0.24 8.3E-06 27.2 1.6 21 52-72 4-24 (79)
23 2w5y_A Histone-lysine N-methyl 87.7 0.57 2E-05 29.8 3.5 34 44-77 53-86 (192)
24 1lv3_A Hypothetical protein YA 83.7 0.73 2.5E-05 24.7 2.1 33 4-37 10-42 (68)
25 3bo5_A Histone-lysine N-methyl 81.4 0.96 3.3E-05 30.6 2.5 28 43-70 126-153 (290)
26 1mvh_A Cryptic LOCI regulator 81.0 1.4 4.8E-05 29.9 3.2 29 43-71 137-165 (299)
27 2f69_A Histone-lysine N-methyl 80.6 1.9 6.4E-05 28.7 3.7 33 45-77 111-145 (261)
28 1h3i_A Histone H3 lysine 4 spe 79.9 2 6.8E-05 28.7 3.7 32 46-77 166-199 (293)
29 2h21_A Ribulose-1,5 bisphospha 79.7 0.94 3.2E-05 32.0 2.1 18 53-70 32-49 (440)
30 1ml9_A Histone H3 methyltransf 77.9 0.99 3.4E-05 30.6 1.7 29 43-71 133-161 (302)
31 3s8p_A Histone-lysine N-methyl 77.0 1.7 5.8E-05 29.3 2.6 20 51-70 144-163 (273)
32 3qxy_A N-lysine methyltransfer 74.8 2.1 7.2E-05 30.5 2.8 20 51-70 47-66 (449)
33 3rq4_A Histone-lysine N-methyl 72.9 2.8 9.6E-05 27.8 2.9 20 51-70 116-135 (247)
34 2d8v_A Zinc finger FYVE domain 57.1 4.4 0.00015 21.5 1.1 26 3-28 8-33 (67)
35 2r3a_A Histone-lysine N-methyl 56.8 13 0.00044 25.2 3.7 24 51-74 149-172 (300)
36 2l8e_A Polyhomeotic-like prote 55.8 5.5 0.00019 19.8 1.3 28 5-33 20-47 (49)
37 2w0t_A Lethal(3)malignant brai 53.8 8.8 0.0003 18.5 1.8 29 5-33 8-36 (43)
38 3g8r_A Probable spore coat pol 53.7 5.5 0.00019 27.8 1.5 22 52-73 277-298 (350)
39 2qpw_A PR domain zinc finger p 52.6 10 0.00036 22.9 2.5 18 52-69 40-57 (149)
40 1vli_A Spore coat polysacchari 47.5 5.7 0.00019 28.1 0.8 28 52-79 313-340 (385)
41 2wqp_A Polysialic acid capsule 45.3 5.4 0.00018 27.8 0.4 22 52-73 288-309 (349)
42 2ffw_A Midline-1; B-BOX, ring 45.0 17 0.00058 19.4 2.4 32 3-36 30-66 (78)
43 2puy_A PHD finger protein 21A; 44.6 15 0.00051 18.4 2.0 22 2-23 4-26 (60)
44 2lo3_A SAGA-associated factor 43.9 6.4 0.00022 19.0 0.4 12 83-94 16-27 (44)
45 1wg2_A Zinc finger (AN1-like) 40.0 17 0.00058 19.1 1.7 24 2-27 14-40 (64)
46 2yqp_A Probable ATP-dependent 39.7 37 0.0013 17.4 3.0 34 3-37 19-52 (60)
47 1mm2_A MI2-beta; PHD, zinc fin 36.9 27 0.00091 17.6 2.3 22 2-23 8-30 (61)
48 1wfp_A Zinc finger (AN1-like) 36.9 21 0.00072 19.2 1.8 24 2-27 24-50 (74)
49 3c5k_A HD6, histone deacetylas 36.1 16 0.00056 21.0 1.5 34 3-37 24-61 (109)
50 2yql_A PHD finger protein 21A; 34.9 25 0.00085 17.3 1.9 22 2-23 8-30 (56)
51 1xwh_A Autoimmune regulator; P 34.5 24 0.00082 18.1 1.9 22 2-23 7-29 (66)
52 1jjd_A Metallothionein, SMTA; 34.5 19 0.00063 18.3 1.3 14 23-36 28-41 (55)
53 2lri_C Autoimmune regulator; Z 33.2 26 0.00088 18.2 1.8 22 3-24 12-34 (66)
54 1wfh_A Zinc finger (AN1-like) 33.1 40 0.0014 17.6 2.5 25 2-28 14-41 (64)
55 1wfl_A Zinc finger protein 216 32.4 26 0.00087 18.9 1.7 25 2-28 24-51 (74)
56 1x4w_A Hypothetical protein FL 32.4 19 0.00065 19.0 1.2 24 2-27 14-43 (67)
57 3tee_A Flagella basal BODY P-r 30.5 18 0.00061 23.3 1.1 19 51-69 71-89 (219)
58 1fp0_A KAP-1 corepressor; PHD 28.3 35 0.0012 18.9 1.9 26 2-27 24-52 (88)
59 1ef4_A Subunit N, DNA-directed 28.0 26 0.00091 17.7 1.2 12 1-12 1-12 (55)
60 2con_A RUH-035 protein, NIN on 26.7 18 0.00063 19.7 0.5 17 5-21 17-37 (79)
61 1twf_J DNA-directed RNA polyme 26.7 27 0.00091 18.6 1.2 12 1-12 2-13 (70)
62 1p1p_A AA-conotoxin PIVA; neur 26.5 33 0.0011 14.3 1.2 20 9-28 3-25 (26)
63 2l5u_A Chromodomain-helicase-D 26.3 36 0.0012 17.1 1.7 22 2-23 10-32 (61)
64 2ftc_B Mitochondrial ribosomal 26.0 44 0.0015 20.0 2.2 18 54-71 23-40 (136)
65 3o36_A Transcription intermedi 25.0 38 0.0013 20.8 1.9 22 2-23 3-25 (184)
66 2e6r_A Jumonji/ARID domain-con 24.2 47 0.0016 18.2 2.0 21 2-22 15-39 (92)
67 2if6_A Hypothetical protein YI 24.0 39 0.0013 20.7 1.8 14 61-74 3-16 (186)
68 3ep0_A PR domain zinc finger p 23.7 54 0.0019 20.2 2.4 19 51-69 37-55 (170)
69 1ee8_A MUTM (FPG) protein; bet 23.4 17 0.0006 24.1 0.0 29 4-33 236-264 (266)
70 3w0f_A Endonuclease 8-like 3; 23.0 17 0.00059 24.6 -0.0 30 5-35 253-284 (287)
71 3bvo_A CO-chaperone protein HS 22.7 47 0.0016 21.1 2.0 21 3-23 10-36 (207)
72 1f62_A Transcription factor WS 22.5 43 0.0015 15.9 1.4 19 5-23 2-24 (51)
73 1rl2_A Protein (ribosomal prot 22.5 52 0.0018 19.7 2.0 21 51-71 38-58 (137)
74 1ynw_B Retinoic acid receptor 22.5 12 0.00043 21.1 -0.7 24 2-25 2-31 (99)
75 2yt5_A Metal-response element- 21.9 46 0.0016 16.7 1.6 22 2-23 5-32 (66)
76 2gmg_A Hypothetical protein PF 21.8 50 0.0017 19.0 1.8 22 2-23 66-93 (105)
77 3mhs_E SAGA-associated factor 21.4 26 0.0009 19.8 0.5 12 83-94 74-85 (96)
78 2iyb_E Testin, TESS, TES; LIM 21.3 71 0.0024 15.7 2.2 9 24-32 54-62 (65)
79 3dal_A PR domain zinc finger p 20.8 53 0.0018 20.8 1.9 19 51-69 68-86 (196)
No 1
>2d8q_A BLU protein, zinc finger MYND domain containing protein 10; zmynd10, ZF-MYND, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.1 PDB: 2dan_A
Probab=99.57 E-value=1.4e-15 Score=84.29 Aligned_cols=47 Identities=38% Similarity=0.828 Sum_probs=43.0
Q ss_pred CCCcCcccCccccCCCCCCCceeecCHHHHHhhhhccccccCCcccc
Q psy14482 2 FDNICGLCGETAKQKCSGCQLIYYCCREHQKIHWKKHKSHCRPMKLC 48 (95)
Q Consensus 2 ~~~~C~~C~~~~~~~C~~c~~~~ycs~~cq~~~w~~Hk~~C~~i~~~ 48 (95)
....|..|+++++++|++|+.++|||++||+.||+.||.+|..+...
T Consensus 14 ~~~~C~~C~~~~~~~Cs~Ck~v~YCs~eCQ~~~W~~HK~~C~~~~~~ 60 (70)
T 2d8q_A 14 ERPRCAYCSAEASKRCSRCQNEWYCCRECQVKHWEKHGKTCVLAAQG 60 (70)
T ss_dssp CCCBCSSSCCBCCCBCTTTSCCBCSCHHHHHHTHHHHHHHCCCCCCC
T ss_pred CCCcCCCCCCcccccCCCCCCEeeCCHHHhHHHHHHHHHHHHHHHHh
Confidence 35689999999999999999999999999999999999999987644
No 2
>2dj8_A Protein CBFA2T1; zinc finger MYND domain, protein MTG8, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=99.54 E-value=3.5e-15 Score=80.35 Aligned_cols=44 Identities=34% Similarity=0.752 Sum_probs=41.2
Q ss_pred CCcCcccCccccCCCCCCCceeecCHHHHHhhhhccccccCCcc
Q psy14482 3 DNICGLCGETAKQKCSGCQLIYYCCREHQKIHWKKHKSHCRPMK 46 (95)
Q Consensus 3 ~~~C~~C~~~~~~~C~~c~~~~ycs~~cq~~~w~~Hk~~C~~i~ 46 (95)
...|+.|+++++++|++|+.++|||++||+.||+.||.+|..+.
T Consensus 15 ~~~C~~C~~~~~~~Cs~C~~v~YCs~~CQ~~~W~~Hk~~C~~~~ 58 (60)
T 2dj8_A 15 SESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHICSGPS 58 (60)
T ss_dssp SCCCSSSCSCCCEECTTTSCCEESSHHHHHHTHHHHTTTSCCSS
T ss_pred CcccccCCCCCcccCCCCCCEeeeCHHHHHHHHHHHHHHHHhcc
Confidence 46899999999999999999999999999999999999998764
No 3
>2od1_A Protein CBFA2T1; zinc finger, cross-braced topology, metal binding protein; NMR {Homo sapiens}
Probab=99.54 E-value=4.4e-15 Score=79.99 Aligned_cols=45 Identities=33% Similarity=0.716 Sum_probs=41.6
Q ss_pred CCCcCcccCccccCCCCCCCceeecCHHHHHhhhhccccccCCcc
Q psy14482 2 FDNICGLCGETAKQKCSGCQLIYYCCREHQKIHWKKHKSHCRPMK 46 (95)
Q Consensus 2 ~~~~C~~C~~~~~~~C~~c~~~~ycs~~cq~~~w~~Hk~~C~~i~ 46 (95)
....|..|+++++++|++|+.++|||++||+.||+.||.+|..+.
T Consensus 12 ~~~~C~~C~~~~~~~Cs~C~~v~YCs~~CQ~~dW~~Hk~~C~~~~ 56 (60)
T 2od1_A 12 SSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHICGQTL 56 (60)
T ss_dssp CSSCCTTTSSCCCEECTTTSCCEESSHHHHHHHHHHHTTTSSCSS
T ss_pred CCCccccCCCcccccCCCCCCeeecCHHHHHHHHHHHhHHHcccc
Confidence 357899999999999999999999999999999999999998654
No 4
>2odd_A Protein CBFA2T1; MYND zinc finger, cross-braced topology, poly-proline, proline-tryptophan interaction, metal binding protein; NMR {Homo sapiens}
Probab=99.54 E-value=3.4e-15 Score=81.32 Aligned_cols=44 Identities=34% Similarity=0.754 Sum_probs=41.2
Q ss_pred CCcCcccCccccCCCCCCCceeecCHHHHHhhhhccccccCCcc
Q psy14482 3 DNICGLCGETAKQKCSGCQLIYYCCREHQKIHWKKHKSHCRPMK 46 (95)
Q Consensus 3 ~~~C~~C~~~~~~~C~~c~~~~ycs~~cq~~~w~~Hk~~C~~i~ 46 (95)
...|..|+++++++|++|+.++|||++||+.||+.||.+|..+.
T Consensus 17 ~~~C~~C~~~~~~~Cs~C~~~~YCs~~CQ~~~W~~Hk~~C~~~~ 60 (64)
T 2odd_A 17 SESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHICGQTL 60 (64)
T ss_dssp SSSCTTTSSCCCEEETTTSCCEESSHHHHHHHHHHHTTTTTSSC
T ss_pred CCcCccccCCCcccCCCCCChhhCCHHHHHHHHHHHhHHHhccc
Confidence 56899999999999999999999999999999999999998764
No 5
>2jw6_A Deformed epidermal autoregulatory factor 1 homolo; zinc binding domain, transcription, alternative splicing, DI mutation, DNA-binding; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=99.52 E-value=6.4e-15 Score=77.11 Aligned_cols=43 Identities=33% Similarity=0.831 Sum_probs=38.6
Q ss_pred CCCcCcccCccccCCCCCCCceeecCHHHHHhhhhccccccCC
Q psy14482 2 FDNICGLCGETAKQKCSGCQLIYYCCREHQKIHWKKHKSHCRP 44 (95)
Q Consensus 2 ~~~~C~~C~~~~~~~C~~c~~~~ycs~~cq~~~w~~Hk~~C~~ 44 (95)
....|..|+++.+++|++|+.++|||++||+.||+.||.+|.+
T Consensus 8 ~~~~C~~C~~~~~~~C~~C~~~~YCs~~CQ~~~W~~Hk~~C~~ 50 (52)
T 2jw6_A 8 KEQSCVNCGREAMSECTGCHKVNYCSTFCQRKDWKDHQHICGQ 50 (52)
T ss_dssp ---CCSSSSSSCSEECTTTCSSEESSHHHHHHHTTTGGGTTTC
T ss_pred cCCcCCCCCCCCcCcCCCCCCEeecCHHHHHHHHHHHCHHHcc
Confidence 3578999999999999999999999999999999999999974
No 6
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.88 E-value=3.6e-10 Score=80.82 Aligned_cols=45 Identities=33% Similarity=0.725 Sum_probs=40.7
Q ss_pred CCcCcccCcc--ccCCCCCCCceeecCHHHHHhhhhccccccCCccc
Q psy14482 3 DNICGLCGET--AKQKCSGCQLIYYCCREHQKIHWKKHKSHCRPMKL 47 (95)
Q Consensus 3 ~~~C~~C~~~--~~~~C~~c~~~~ycs~~cq~~~w~~Hk~~C~~i~~ 47 (95)
...|..|+++ .+.+|++|+.++|||++||+.||+.||.+|..+..
T Consensus 49 ~~~C~~C~~~~~~~~~C~~C~~~~yCs~~Cq~~~w~~Hk~eC~~l~~ 95 (433)
T 3qww_A 49 GHHCECCFARKEGLSKCGRCKQAFYCDVECQKEDWPLHKLECSSMVV 95 (433)
T ss_dssp TTBCTTTCCBCSSCEECTTTSCCEESSHHHHHHHHHHHTTTHHHHHH
T ss_pred CCcCCcccccCCCCCCCCCCcceeecChhhhhhhhhHHHHHHHHHHH
Confidence 4689999986 58899999999999999999999999999987754
No 7
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.82 E-value=5.4e-10 Score=79.67 Aligned_cols=46 Identities=33% Similarity=0.790 Sum_probs=40.9
Q ss_pred CCcCcccCcc--ccCCCCCCCceeecCHHHHHhhhhccccccCCcccc
Q psy14482 3 DNICGLCGET--AKQKCSGCQLIYYCCREHQKIHWKKHKSHCRPMKLC 48 (95)
Q Consensus 3 ~~~C~~C~~~--~~~~C~~c~~~~ycs~~cq~~~w~~Hk~~C~~i~~~ 48 (95)
...|..|+++ .+.+|++|+.++|||++||+.||+.||.+|+.+...
T Consensus 47 ~~~C~~C~~~~~~~~~C~~C~~~~yCs~~Cq~~~w~~Hk~eC~~~~~~ 94 (429)
T 3qwp_A 47 GVVCDRCLLGKEKLMRCSQCRVAKYCSAKCQKKAWPDHKRECKCLKSC 94 (429)
T ss_dssp TTBCTTTCCBCSSCEECTTTSCCEESSHHHHHHTHHHHHHHHHHHHHT
T ss_pred CCcCcCCCCcCCCCCcCCCCCCcccCChhhhhhhhhhhHHhhhhHHhc
Confidence 5689999984 588999999999999999999999999999887543
No 8
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.70 E-value=2.2e-09 Score=77.76 Aligned_cols=45 Identities=31% Similarity=0.752 Sum_probs=40.2
Q ss_pred CCcCcccCcc--ccCCCCCCCceeecCHHHHHhhhhccccccCCccc
Q psy14482 3 DNICGLCGET--AKQKCSGCQLIYYCCREHQKIHWKKHKSHCRPMKL 47 (95)
Q Consensus 3 ~~~C~~C~~~--~~~~C~~c~~~~ycs~~cq~~~w~~Hk~~C~~i~~ 47 (95)
...|..|+++ .+.+|++|+.++|||++||+.||+.||.+|..+..
T Consensus 49 ~~~C~~C~~~~~~~~~C~~C~~~~yCs~~Cq~~~w~~Hk~eC~~~~~ 95 (490)
T 3n71_A 49 NFVCHTCFKRQEKLHRCGQCKFAHYCDRTCQKDAWLNHKNECAAIKK 95 (490)
T ss_dssp TTBCTTTCCBCSCCEECTTTSCCEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCCCCCCCCCCCCCCCCCCcCcCCHHHhhhhhhHHHHHhHHHHh
Confidence 4679999875 58899999999999999999999999999987654
No 9
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.69 E-value=1.4e-08 Score=73.52 Aligned_cols=50 Identities=20% Similarity=0.306 Sum_probs=43.6
Q ss_pred CccccccccccceEEEcCCCCCCcEEEeeCCceEccCC-CCcccccccccc
Q psy14482 44 PMKLCEDKVLGRYYIASRSIKAGEVVLREPPLVQGPCQ-MTGPVCLGCLKA 93 (95)
Q Consensus 44 ~i~~~~~~~~gR~~va~r~i~~geii~~E~p~~~~p~~-~~~~~c~~C~~~ 93 (95)
++++..++..||+++|+++|++||+|+.|.|+++.+.. .....|.+|+++
T Consensus 8 ~v~v~~~~~~GR~lvAtr~i~~Ge~Il~e~P~~~v~~~~~~~~~C~~C~~~ 58 (490)
T 3n71_A 8 NVEVFTSEGKGRGLKATKEFWAADVIFAERAYSAVVFDSLINFVCHTCFKR 58 (490)
T ss_dssp TEEEEECSSSCEEEEESSCBCTTCEEEEECCSEEEECGGGTTTBCTTTCCB
T ss_pred ceEEEecCCCCceEEeccCCCCCCEEEecCCceEEecccccCCcCCCCCCC
Confidence 46677888999999999999999999999999976655 478999999875
No 10
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.68 E-value=1.4e-08 Score=72.65 Aligned_cols=50 Identities=18% Similarity=0.214 Sum_probs=44.2
Q ss_pred CccccccccccceEEEcCCCCCCcEEEeeCCceEccCCC-Ccccccccccc
Q psy14482 44 PMKLCEDKVLGRYYIASRSIKAGEVVLREPPLVQGPCQM-TGPVCLGCLKA 93 (95)
Q Consensus 44 ~i~~~~~~~~gR~~va~r~i~~geii~~E~p~~~~p~~~-~~~~c~~C~~~ 93 (95)
++++..++..||+++|+++|++||+|+.|.|+++++... ...+|.+|+++
T Consensus 8 ~ve~~~~~~~GRgl~A~r~i~~Ge~Il~e~P~a~~~~~~~~~~~C~~C~~~ 58 (433)
T 3qww_A 8 GLERFCSAGKGRGLRALRPFHVGDLLFSCPAYACVLTVGERGHHCECCFAR 58 (433)
T ss_dssp TEEEEECTTSCEEEEESSCBCTTCEEEEEECSEEEECGGGTTTBCTTTCCB
T ss_pred cEEEeecCCCcCeEEECCCCCCCCEEEecCCceEEecccccCCcCCccccc
Confidence 356677888999999999999999999999999998654 78999999985
No 11
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.66 E-value=1.9e-08 Score=71.73 Aligned_cols=49 Identities=27% Similarity=0.463 Sum_probs=42.9
Q ss_pred ccccccccccceEEEcCCCCCCcEEEeeCCceEccCCC-Ccccccccccc
Q psy14482 45 MKLCEDKVLGRYYIASRSIKAGEVVLREPPLVQGPCQM-TGPVCLGCLKA 93 (95)
Q Consensus 45 i~~~~~~~~gR~~va~r~i~~geii~~E~p~~~~p~~~-~~~~c~~C~~~ 93 (95)
++...++..||+++|+++|++||+|+.|.|++.+|... ...+|.+|+++
T Consensus 7 i~~~~~~~~GR~l~Atr~i~~Ge~Il~e~P~~~~~~~~~~~~~C~~C~~~ 56 (429)
T 3qwp_A 7 VEKFATANRGNGLRAVTPLRPGELLFRSDPLAYTVCKGSRGVVCDRCLLG 56 (429)
T ss_dssp EEEEECSSSSEEEEESSCBCTTCEEEEECCSEEEECGGGBTTBCTTTCCB
T ss_pred eeecccCCCCCeEEeCCCCCCCCEEEecCCceeeeccccCCCcCcCCCCc
Confidence 34445778899999999999999999999999999874 78999999975
No 12
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.76 E-value=0.0011 Score=34.57 Aligned_cols=38 Identities=29% Similarity=0.765 Sum_probs=31.1
Q ss_pred CcCcccCccccCCCCCCCceeecCHHHHHhhhhccccccCCcc
Q psy14482 4 NICGLCGETAKQKCSGCQLIYYCCREHQKIHWKKHKSHCRPMK 46 (95)
Q Consensus 4 ~~C~~C~~~~~~~C~~c~~~~ycs~~cq~~~w~~Hk~~C~~i~ 46 (95)
..|.+|+.++..+|.+|. +.|||-+|.+.|-. .|...+
T Consensus 13 ~~C~vC~~~~kY~CPrC~-~~yCSl~C~k~Hk~----~C~~~~ 50 (56)
T 2yqq_A 13 VVCVICLEKPKYRCPACR-VPYCSVVCFRKHKE----QCNPET 50 (56)
T ss_dssp CCCTTTCSCCSEECTTTC-CEESSHHHHHHHHH----HCCCCC
T ss_pred CccCcCcCCCeeeCCCCC-CCeeCHHHHHHHHh----hCcCCc
Confidence 469999998899999998 99999999877654 376543
No 13
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=96.33 E-value=0.0019 Score=33.95 Aligned_cols=30 Identities=30% Similarity=0.814 Sum_probs=25.9
Q ss_pred CcCcccCc----cccCCCCCCCceeecCHHHHHhh
Q psy14482 4 NICGLCGE----TAKQKCSGCQLIYYCCREHQKIH 34 (95)
Q Consensus 4 ~~C~~C~~----~~~~~C~~c~~~~ycs~~cq~~~ 34 (95)
..|.+|+. ++..+|.+|. +.|||-.|.+.|
T Consensus 12 ~~C~vC~~~~~~~akY~CPrC~-~rYCSl~C~k~H 45 (59)
T 1x4s_A 12 GPCGFCPAGEVQPARYTCPRCN-APYCSLRCYRTH 45 (59)
T ss_dssp EEECSSCTTCCEEECEECTTTC-CEESSHHHHHHH
T ss_pred CcCcCCCCCcCCCccccCcCCC-CCccChHHHHHH
Confidence 47999984 5799999998 999999999964
No 14
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=95.28 E-value=0.015 Score=34.14 Aligned_cols=35 Identities=20% Similarity=0.140 Sum_probs=27.7
Q ss_pred CccccccccccceEEEcCCCCCCcEEEeeCCceEcc
Q psy14482 44 PMKLCEDKVLGRYYIASRSIKAGEVVLREPPLVQGP 79 (95)
Q Consensus 44 ~i~~~~~~~~gR~~va~r~i~~geii~~E~p~~~~p 79 (95)
.+++..++..|++++|+++|++|++|. |-+..+.+
T Consensus 5 ~~~v~~s~~~G~GvfA~~~I~~G~~I~-ey~g~vi~ 39 (119)
T 1n3j_A 5 RVIVKKSPLGGYGVFARKSFEKGELVE-ECLCIVRH 39 (119)
T ss_dssp SEEEECSCSSCCEEEECCCBCSCEEEC-CCCCEEEC
T ss_pred CEEEEECCCceeEEEECCcCCCCCEEE-EeeEEEEC
Confidence 456677778899999999999999986 66555444
No 15
>2odd_A Protein CBFA2T1; MYND zinc finger, cross-braced topology, poly-proline, proline-tryptophan interaction, metal binding protein; NMR {Homo sapiens}
Probab=94.09 E-value=0.015 Score=30.64 Aligned_cols=14 Identities=14% Similarity=0.002 Sum_probs=0.9
Q ss_pred CCCCCCcEEEeeCC
Q psy14482 61 RSIKAGEVVLREPP 74 (95)
Q Consensus 61 r~i~~geii~~E~p 74 (95)
++|++||+||.|.|
T Consensus 2 ~~~~~G~~il~~~~ 15 (64)
T 2odd_A 2 NLYFQGENLYFQGD 15 (64)
T ss_dssp -------------C
T ss_pred CcCCCCCEEeeCCC
Confidence 57899999999998
No 16
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=93.64 E-value=0.095 Score=32.24 Aligned_cols=39 Identities=21% Similarity=0.135 Sum_probs=31.7
Q ss_pred ccccCCccccccccccceEEEcCCCCCCcEEEeeCCceE
Q psy14482 39 KSHCRPMKLCEDKVLGRYYIASRSIKAGEVVLREPPLVQ 77 (95)
Q Consensus 39 k~~C~~i~~~~~~~~gR~~va~r~i~~geii~~E~p~~~ 77 (95)
+....++++...+..|++++|+++|++|++|..-...++
T Consensus 26 ~g~~~~l~v~~~~~kG~Gl~A~~~I~~G~~I~ey~Gevi 64 (166)
T 3f9x_A 26 SGKEEGMKIDLIDGKGRGVIATKQFSRGDFVVEYHGDLI 64 (166)
T ss_dssp HTCCTTEEEEEETTTEEEEEESSCBCTTCEEEECCSEEE
T ss_pred cCCccCeEEEECCCceeEEEECCCcCCCCEEEEeeceEc
Confidence 345667888888899999999999999999976665554
No 17
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=93.49 E-value=0.042 Score=35.77 Aligned_cols=36 Identities=14% Similarity=0.096 Sum_probs=29.8
Q ss_pred CccccccccccceEEEcCCCCCCcEEEeeCCceEcc
Q psy14482 44 PMKLCEDKVLGRYYIASRSIKAGEVVLREPPLVQGP 79 (95)
Q Consensus 44 ~i~~~~~~~~gR~~va~r~i~~geii~~E~p~~~~p 79 (95)
.+++..++..|++++|+++|++|++|....+.++..
T Consensus 75 ~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~ 110 (222)
T 3ope_A 75 CLERFRAEEKGWGIRTKEPLKAGQFIIEYLGEVVSE 110 (222)
T ss_dssp CCEEEECTTSSEEEECSSCBCTTCEEEECCSEEECH
T ss_pred cEEEEEcCCCceEEEECceECCCCEEEEecceecCH
Confidence 467777788999999999999999998777766544
No 18
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=92.65 E-value=0.056 Score=35.48 Aligned_cols=36 Identities=17% Similarity=0.064 Sum_probs=28.7
Q ss_pred CCccccccccccceEEEcCCCCCCcEEEeeCCceEc
Q psy14482 43 RPMKLCEDKVLGRYYIASRSIKAGEVVLREPPLVQG 78 (95)
Q Consensus 43 ~~i~~~~~~~~gR~~va~r~i~~geii~~E~p~~~~ 78 (95)
..+++..++..|++++|+++|++|++|..-...++.
T Consensus 92 ~~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~ 127 (232)
T 3ooi_A 92 PEVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGELID 127 (232)
T ss_dssp CCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEEC
T ss_pred ccEEEEEcCCceeEEEECceecCCceeeEeeeeccC
Confidence 456777788899999999999999999665555443
No 19
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=92.05 E-value=0.1 Score=35.28 Aligned_cols=39 Identities=13% Similarity=0.038 Sum_probs=30.8
Q ss_pred ccCCccccccccccceEEEcCCCCCCcEEEeeCCceEcc
Q psy14482 41 HCRPMKLCEDKVLGRYYIASRSIKAGEVVLREPPLVQGP 79 (95)
Q Consensus 41 ~C~~i~~~~~~~~gR~~va~r~i~~geii~~E~p~~~~p 79 (95)
.-..+++..++..|.+++|.++|++|++|..-...++..
T Consensus 115 ~~~~leV~~t~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~ 153 (278)
T 3h6l_A 115 QHADVEVILTEKKGWGLRAAKDLPSNTFVLEYCGEVLDH 153 (278)
T ss_dssp CCCCEEEEECSSSCEEEEESSCBCTTCEEEECCCEEECH
T ss_pred CccCEEEEEcCCCceEEEeCCccCCCCEeEEeeeeecCH
Confidence 344567777788999999999999999997666666543
No 20
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=90.07 E-value=0.19 Score=34.05 Aligned_cols=36 Identities=14% Similarity=0.111 Sum_probs=28.1
Q ss_pred CCccccccccccceEEEcCCCCCCcEEEeeCCceEc
Q psy14482 43 RPMKLCEDKVLGRYYIASRSIKAGEVVLREPPLVQG 78 (95)
Q Consensus 43 ~~i~~~~~~~~gR~~va~r~i~~geii~~E~p~~~~ 78 (95)
..+++..++..|++++|.++|++|++|..-...++.
T Consensus 147 ~~l~v~~t~~kG~Gv~A~~~I~~G~~I~eY~Gevi~ 182 (287)
T 3hna_A 147 ARLQLYRTRDMGWGVRSLQDIPPGTFVCEYVGELIS 182 (287)
T ss_dssp SCEEEEECSSSSEEEEESSCBCTTCEEEEECEEEEE
T ss_pred ccEEEEEcCCCceEEEeCcccCCCCEEEEeeeEEcc
Confidence 345666778899999999999999999665555543
No 21
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=89.03 E-value=0.29 Score=35.51 Aligned_cols=40 Identities=25% Similarity=0.339 Sum_probs=29.3
Q ss_pred HHhhhhc-cccccCCccccccccccceEEEcCCCCCCcEEE
Q psy14482 31 QKIHWKK-HKSHCRPMKLCEDKVLGRYYIASRSIKAGEVVL 70 (95)
Q Consensus 31 q~~~w~~-Hk~~C~~i~~~~~~~~gR~~va~r~i~~geii~ 70 (95)
.-..|-. +-.....+++...+..||+++|+++|++||+|+
T Consensus 80 ~ll~W~~~~G~~~~~v~i~~~~~~GrGl~A~~dI~~ge~ll 120 (497)
T 3smt_A 80 DLMKWASENGASVEGFEMVNFKEEGFGLRATRDIKAEELFL 120 (497)
T ss_dssp HHHHHHHHTTCCCTTEEEEEETTTEEEEEESSCBCTTCEEE
T ss_pred HHHHHHHHCCCCccceEEEEcCCCccEEEEcccCCCCCEEE
Confidence 3457776 333344566666677899999999999999875
No 22
>1wvo_A Sialic acid synthase; antifreeze protein like domain, N-acetylneuraminic acid phosphate synthase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.93 E-value=0.24 Score=27.18 Aligned_cols=21 Identities=14% Similarity=0.148 Sum_probs=17.6
Q ss_pred cccceEEEcCCCCCCcEEEee
Q psy14482 52 VLGRYYIASRSIKAGEVVLRE 72 (95)
Q Consensus 52 ~~gR~~va~r~i~~geii~~E 72 (95)
..+|+++|+++|++||+|-.|
T Consensus 4 ~~rrslvA~rdI~~Gevit~~ 24 (79)
T 1wvo_A 4 GSSGSVVAKVKIPEGTILTMD 24 (79)
T ss_dssp CCCCEEEESSCBCTTCBCCGG
T ss_pred cccEEEEEeCccCCCCCcCHH
Confidence 468999999999999988443
No 23
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=87.71 E-value=0.57 Score=29.82 Aligned_cols=34 Identities=26% Similarity=0.373 Sum_probs=25.9
Q ss_pred CccccccccccceEEEcCCCCCCcEEEeeCCceE
Q psy14482 44 PMKLCEDKVLGRYYIASRSIKAGEVVLREPPLVQ 77 (95)
Q Consensus 44 ~i~~~~~~~~gR~~va~r~i~~geii~~E~p~~~ 77 (95)
.+++..++..|++++|.++|++|++|..=..-++
T Consensus 53 ~l~V~~s~~~G~GlfA~~~I~~G~~I~EY~Gevi 86 (192)
T 2w5y_A 53 AVGVYRSPIHGRGLFCKRNIDAGEMVIEYAGNVI 86 (192)
T ss_dssp HEEEEECSSSSEEEEESSCBCTTCEEEECCSEEE
T ss_pred cEEEEEcCCceeEEEECcccCCCCEEEEeeeeEe
Confidence 3556667778999999999999999974444443
No 24
>1lv3_A Hypothetical protein YACG; zinc finger, rubredoxin knuckle, C4 tetrahedral Zn+2, antiparallel beta strand and alpha helix, NESG project; NMR {Escherichia coli} SCOP: g.39.1.9
Probab=83.65 E-value=0.73 Score=24.70 Aligned_cols=33 Identities=21% Similarity=0.350 Sum_probs=22.2
Q ss_pred CcCcccCccccCCCCCCCceeecCHHHHHhhhhc
Q psy14482 4 NICGLCGETAKQKCSGCQLIYYCCREHQKIHWKK 37 (95)
Q Consensus 4 ~~C~~C~~~~~~~C~~c~~~~ycs~~cq~~~w~~ 37 (95)
..|..|+++..-+=. =..+.|||+.|+.+|--.
T Consensus 10 ~~CP~Cgkp~~W~~~-~~~rPFCSeRCr~iDLg~ 42 (68)
T 1lv3_A 10 VNCPTCGKTVVWGEI-SPFRPFCSKRCQLIDLGE 42 (68)
T ss_dssp EECTTTCCEEECSSS-SSCCSSSSHHHHHHHHSC
T ss_pred CcCCCCCCccccccc-CCCCcccCHHHHhhhHHH
Confidence 468888887531111 224679999999998654
No 25
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=81.41 E-value=0.96 Score=30.56 Aligned_cols=28 Identities=14% Similarity=0.056 Sum_probs=23.5
Q ss_pred CCccccccccccceEEEcCCCCCCcEEE
Q psy14482 43 RPMKLCEDKVLGRYYIASRSIKAGEVVL 70 (95)
Q Consensus 43 ~~i~~~~~~~~gR~~va~r~i~~geii~ 70 (95)
..+++..++..|.+++|.++|++|++|.
T Consensus 126 ~~l~V~~s~~~G~Gl~A~~~I~~G~~I~ 153 (290)
T 3bo5_A 126 FHFQVFKTHKKGWGLRTLEFIPKGRFVC 153 (290)
T ss_dssp SCEEEEECSSSSEEEEESSCBCTTCEEE
T ss_pred ccEEEEEcCCCcceEeECCccCCCCEEE
Confidence 3456667778899999999999999885
No 26
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=81.00 E-value=1.4 Score=29.89 Aligned_cols=29 Identities=21% Similarity=0.202 Sum_probs=23.5
Q ss_pred CCccccccccccceEEEcCCCCCCcEEEe
Q psy14482 43 RPMKLCEDKVLGRYYIASRSIKAGEVVLR 71 (95)
Q Consensus 43 ~~i~~~~~~~~gR~~va~r~i~~geii~~ 71 (95)
..+++..++..|.++.|.++|++|++|..
T Consensus 137 ~~l~v~~t~~~G~Gv~A~~~I~kG~~I~E 165 (299)
T 1mvh_A 137 LPLEIFKTKEKGWGVRSLRFAPAGTFITC 165 (299)
T ss_dssp SCEEEEECSSSSEEEEESSCBCTTCEEEE
T ss_pred ccEEEEEcCCCcceEeeCceeCCCCEEEE
Confidence 34566666788999999999999998854
No 27
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=80.61 E-value=1.9 Score=28.74 Aligned_cols=33 Identities=9% Similarity=0.044 Sum_probs=24.0
Q ss_pred ccccccccc--cceEEEcCCCCCCcEEEeeCCceE
Q psy14482 45 MKLCEDKVL--GRYYIASRSIKAGEVVLREPPLVQ 77 (95)
Q Consensus 45 i~~~~~~~~--gR~~va~r~i~~geii~~E~p~~~ 77 (95)
+.+..+... |++++|.++|++|++|..-...++
T Consensus 111 ~~v~~S~i~~kG~GvfA~~~I~~G~~I~eY~Gevi 145 (261)
T 2f69_A 111 VYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRI 145 (261)
T ss_dssp EEEEECSSTTCCEEEEESSCBCTTCEEEEECCEEE
T ss_pred EEEEecCCCCCceEEEECcccCCCCEEEEEeeEEe
Confidence 444555544 999999999999999965544443
No 28
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=79.93 E-value=2 Score=28.72 Aligned_cols=32 Identities=6% Similarity=-0.036 Sum_probs=22.2
Q ss_pred ccccccccc--ceEEEcCCCCCCcEEEeeCCceE
Q psy14482 46 KLCEDKVLG--RYYIASRSIKAGEVVLREPPLVQ 77 (95)
Q Consensus 46 ~~~~~~~~g--R~~va~r~i~~geii~~E~p~~~ 77 (95)
.+..+...| ++++|+++|++|++|+.-...++
T Consensus 166 ~v~~S~i~GkG~Gvfa~~~I~~G~~I~ey~Ge~i 199 (293)
T 1h3i_A 166 YVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRI 199 (293)
T ss_dssp EEEECSSSSSSEEEEESSCBCTTCEEEEECCEEE
T ss_pred EEeeeecCCCcceEEECCcCCCCCEEEEeccEEc
Confidence 334444444 99999999999999965444443
No 29
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Probab=79.72 E-value=0.94 Score=32.00 Aligned_cols=18 Identities=28% Similarity=0.396 Sum_probs=16.5
Q ss_pred ccceEEEcCCCCCCcEEE
Q psy14482 53 LGRYYIASRSIKAGEVVL 70 (95)
Q Consensus 53 ~gR~~va~r~i~~geii~ 70 (95)
.||+++|+++|++||+|+
T Consensus 32 ~GrGl~A~~~I~~ge~ll 49 (440)
T 2h21_A 32 EGLGLVALKDISRNDVIL 49 (440)
T ss_dssp TEEEEEESSCBCTTEEEE
T ss_pred CCCEEEEcccCCCCCEEE
Confidence 499999999999999875
No 30
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=77.88 E-value=0.99 Score=30.59 Aligned_cols=29 Identities=28% Similarity=0.313 Sum_probs=23.6
Q ss_pred CCccccccccccceEEEcCCCCCCcEEEe
Q psy14482 43 RPMKLCEDKVLGRYYIASRSIKAGEVVLR 71 (95)
Q Consensus 43 ~~i~~~~~~~~gR~~va~r~i~~geii~~ 71 (95)
..+++..++..|.++.|.++|++|++|..
T Consensus 133 ~~l~v~~t~~kG~Gv~A~~~I~~G~~I~E 161 (302)
T 1ml9_A 133 VPLQIFRTKDRGWGVKCPVNIKRGQFVDR 161 (302)
T ss_dssp SCEEEEECSSSCEEEECSSCBCTTCEEEE
T ss_pred cceEEEEcCCCceEEEECCeeCCCCEEEE
Confidence 34566667778999999999999998853
No 31
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}
Probab=76.97 E-value=1.7 Score=29.29 Aligned_cols=20 Identities=15% Similarity=0.207 Sum_probs=17.7
Q ss_pred ccccceEEEcCCCCCCcEEE
Q psy14482 51 KVLGRYYIASRSIKAGEVVL 70 (95)
Q Consensus 51 ~~~gR~~va~r~i~~geii~ 70 (95)
+..|++++|+++|++||+|.
T Consensus 144 e~~G~GlfA~~~I~kGe~I~ 163 (273)
T 3s8p_A 144 EQNGAKIVATKEWKRNDKIE 163 (273)
T ss_dssp CSSEEEEEESSCBCTTCEEE
T ss_pred cCCCceEEECCccCCCCEEE
Confidence 45799999999999999885
No 32
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=74.80 E-value=2.1 Score=30.51 Aligned_cols=20 Identities=35% Similarity=0.561 Sum_probs=17.5
Q ss_pred ccccceEEEcCCCCCCcEEE
Q psy14482 51 KVLGRYYIASRSIKAGEVVL 70 (95)
Q Consensus 51 ~~~gR~~va~r~i~~geii~ 70 (95)
+..||+++|+++|++||+|+
T Consensus 47 ~~~G~Gv~A~~dI~~ge~ll 66 (449)
T 3qxy_A 47 TVAGYGMVARESVQAGELLF 66 (449)
T ss_dssp CSSSSEEEESSCBCTTCEEE
T ss_pred CCceEEEEECCCCCCCCEEE
Confidence 35699999999999999875
No 33
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}
Probab=72.88 E-value=2.8 Score=27.76 Aligned_cols=20 Identities=20% Similarity=0.255 Sum_probs=17.5
Q ss_pred ccccceEEEcCCCCCCcEEE
Q psy14482 51 KVLGRYYIASRSIKAGEVVL 70 (95)
Q Consensus 51 ~~~gR~~va~r~i~~geii~ 70 (95)
+..|++++|+++|++||+|.
T Consensus 116 ~~~G~Gv~A~~~I~kGE~I~ 135 (247)
T 3rq4_A 116 ETNGAKIVSTRAWKKNEKLE 135 (247)
T ss_dssp CSSCEEEEESSCBCTTCEEE
T ss_pred cCCcceEEeCCccCCCCEEE
Confidence 35699999999999999884
No 34
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=57.07 E-value=4.4 Score=21.52 Aligned_cols=26 Identities=38% Similarity=0.930 Sum_probs=22.5
Q ss_pred CCcCcccCccccCCCCCCCceeecCH
Q psy14482 3 DNICGLCGETAKQKCSGCQLIYYCCR 28 (95)
Q Consensus 3 ~~~C~~C~~~~~~~C~~c~~~~ycs~ 28 (95)
.+=|-+|..-+..+|.+|.---||.+
T Consensus 8 ~pWC~ICneDAtlrC~gCdgDLYC~r 33 (67)
T 2d8v_A 8 LPWCCICNEDATLRCAGCDGDLYCAR 33 (67)
T ss_dssp CSSCTTTCSCCCEEETTTTSEEECSS
T ss_pred CCeeEEeCCCCeEEecCCCCceehHH
Confidence 45688999999999999988899973
No 35
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}
Probab=56.84 E-value=13 Score=25.15 Aligned_cols=24 Identities=17% Similarity=-0.086 Sum_probs=19.4
Q ss_pred ccccceEEEcCCCCCCcEEEeeCC
Q psy14482 51 KVLGRYYIASRSIKAGEVVLREPP 74 (95)
Q Consensus 51 ~~~gR~~va~r~i~~geii~~E~p 74 (95)
+..|.++.|.++|++|++|..=..
T Consensus 149 ~~kG~Gl~A~~~I~~G~~I~EY~G 172 (300)
T 2r3a_A 149 NGRGWGVKTLVKIKRMSFVMEYVG 172 (300)
T ss_dssp SSCCEEEEESSCBCTTCEEEEECC
T ss_pred CCceEEEEeCccccCCCEeEEEee
Confidence 358999999999999998854333
No 36
>2l8e_A Polyhomeotic-like protein 1; DNA binding protein; NMR {Homo sapiens}
Probab=55.78 E-value=5.5 Score=19.77 Aligned_cols=28 Identities=21% Similarity=0.313 Sum_probs=18.5
Q ss_pred cCcccCccccCCCCCCCceeecCHHHHHh
Q psy14482 5 ICGLCGETAKQKCSGCQLIYYCCREHQKI 33 (95)
Q Consensus 5 ~C~~C~~~~~~~C~~c~~~~ycs~~cq~~ 33 (95)
.|..|+++....= .-+...|||..|.+.
T Consensus 20 ~C~~CG~~i~~~~-~~r~krFCS~sCR~~ 47 (49)
T 2l8e_A 20 KCEYCGKYAPAEQ-FRGSKRFCSMTCAKR 47 (49)
T ss_dssp ECTTTCCEEEGGG-CTTTSSSCSHHHHHH
T ss_pred cChhccCcccccc-CCCCCccCCHHHHhh
Confidence 5888888642211 234568999999865
No 37
>2w0t_A Lethal(3)malignant brain tumor-like 2 protein; zinc, YACG, LMBL2, nucleus, zinc-finger, RNA binding, MBT repeats, PCG proteins, polymorphism; NMR {Homo sapiens}
Probab=53.82 E-value=8.8 Score=18.54 Aligned_cols=29 Identities=14% Similarity=0.448 Sum_probs=18.6
Q ss_pred cCcccCccccCCCCCCCceeecCHHHHHh
Q psy14482 5 ICGLCGETAKQKCSGCQLIYYCCREHQKI 33 (95)
Q Consensus 5 ~C~~C~~~~~~~C~~c~~~~ycs~~cq~~ 33 (95)
.|..|++.+...=..-+...+||..|-+.
T Consensus 8 ~CE~CG~~g~~~~F~~ksKRFCS~~Carr 36 (43)
T 2w0t_A 8 VCEMCGIVGTREAFFSKTKRFCSVSCSRS 36 (43)
T ss_dssp ECTTTCCEEETTTSCTTTSSSSSHHHHHH
T ss_pred hhhhhcCcchhhhhccCCcceechhhhCc
Confidence 68888876543333235667888888654
No 38
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=53.65 E-value=5.5 Score=27.77 Aligned_cols=22 Identities=32% Similarity=0.436 Sum_probs=18.4
Q ss_pred cccceEEEcCCCCCCcEEEeeC
Q psy14482 52 VLGRYYIASRSIKAGEVVLREP 73 (95)
Q Consensus 52 ~~gR~~va~r~i~~geii~~E~ 73 (95)
...|.+++.++|++||++-.|.
T Consensus 277 ~~rrSlva~~di~~Ge~lt~~n 298 (350)
T 3g8r_A 277 SLRRGVFATRPVAAGEALTADN 298 (350)
T ss_dssp TTSCEEEESSCBCTTCBCBTTB
T ss_pred ccceEEEEccccCCCCCccHHH
Confidence 4689999999999999885443
No 39
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*
Probab=52.61 E-value=10 Score=22.90 Aligned_cols=18 Identities=17% Similarity=0.028 Sum_probs=16.1
Q ss_pred cccceEEEcCCCCCCcEE
Q psy14482 52 VLGRYYIASRSIKAGEVV 69 (95)
Q Consensus 52 ~~gR~~va~r~i~~geii 69 (95)
..|.++.|.++|+.|+.+
T Consensus 40 ~~G~GVfA~~~I~kG~~~ 57 (149)
T 2qpw_A 40 KTRIGVWATKPILKGKKF 57 (149)
T ss_dssp TTSEEEEESSCBCTTCEE
T ss_pred CCceEEEECCccCCCCEE
Confidence 459999999999999976
No 40
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=47.46 E-value=5.7 Score=28.06 Aligned_cols=28 Identities=21% Similarity=0.216 Sum_probs=20.7
Q ss_pred cccceEEEcCCCCCCcEEEeeCCceEcc
Q psy14482 52 VLGRYYIASRSIKAGEVVLREPPLVQGP 79 (95)
Q Consensus 52 ~~gR~~va~r~i~~geii~~E~p~~~~p 79 (95)
...|.+++.++|++||++-.|.-.+.-|
T Consensus 313 ~~rrSlva~~di~~Ge~it~~nl~~kRP 340 (385)
T 1vli_A 313 FAYRGIFTTAPIQKGEAFSEDNIAVLRP 340 (385)
T ss_dssp HTSCEEEESSCBCTTCBCCTTTEEEECC
T ss_pred hheeEEEEccccCCCCEecHHHeeEEcC
Confidence 4689999999999999985554333333
No 41
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=45.30 E-value=5.4 Score=27.76 Aligned_cols=22 Identities=23% Similarity=0.283 Sum_probs=18.3
Q ss_pred cccceEEEcCCCCCCcEEEeeC
Q psy14482 52 VLGRYYIASRSIKAGEVVLREP 73 (95)
Q Consensus 52 ~~gR~~va~r~i~~geii~~E~ 73 (95)
...|.+++.++|++||++-.|.
T Consensus 288 ~~rrsl~a~~di~~Ge~~t~~n 309 (349)
T 2wqp_A 288 FAFASVVADKDIKKGELLSGDN 309 (349)
T ss_dssp HHSCEEEESSCBCTTCBCCTTT
T ss_pred hheeEEEEccccCCCCEecHHH
Confidence 3689999999999999885543
No 42
>2ffw_A Midline-1; B-BOX, ring finger, zinc-finger, ligase; NMR {Homo sapiens}
Probab=44.97 E-value=17 Score=19.36 Aligned_cols=32 Identities=31% Similarity=0.801 Sum_probs=23.2
Q ss_pred CCcCcccCc----cccCCCCCCCceeecCHHHHHh-hhh
Q psy14482 3 DNICGLCGE----TAKQKCSGCQLIYYCCREHQKI-HWK 36 (95)
Q Consensus 3 ~~~C~~C~~----~~~~~C~~c~~~~ycs~~cq~~-~w~ 36 (95)
+..|..|-. ++.++|..|. ++|| +.|.+. |-.
T Consensus 30 ~v~C~~C~~~~~~~A~ksCl~C~-~s~C-~~hl~~~H~~ 66 (78)
T 2ffw_A 30 KVLCQFCDQDPAQDAVKTCVTCE-VSYC-DECLKATHPN 66 (78)
T ss_dssp CCBCSSCCSSSCCBCCEEETTTT-EEEC-HHHHHHHSCC
T ss_pred CccCCcCCCCCCCCCeeEccCcc-chhh-hhhhHhhcCC
Confidence 457888853 4688999997 8899 667665 543
No 43
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=44.56 E-value=15 Score=18.44 Aligned_cols=22 Identities=18% Similarity=0.782 Sum_probs=16.2
Q ss_pred CCCcCcccCccc-cCCCCCCCce
Q psy14482 2 FDNICGLCGETA-KQKCSGCQLI 23 (95)
Q Consensus 2 ~~~~C~~C~~~~-~~~C~~c~~~ 23 (95)
++..|.+|+... +..|.+|...
T Consensus 4 ~~~~C~vC~~~g~ll~Cd~C~~~ 26 (60)
T 2puy_A 4 HEDFCSVCRKSGQLLMCDTCSRV 26 (60)
T ss_dssp CCSSCTTTCCCSSCEECSSSSCE
T ss_pred CCCCCcCCCCCCcEEEcCCCCcC
Confidence 567899999864 6678887643
No 44
>2lo3_A SAGA-associated factor 73; zinc-finger, deubiquitination, transcription factor, SAGA CO transcription; NMR {Saccharomyces cerevisiae}
Probab=43.87 E-value=6.4 Score=18.97 Aligned_cols=12 Identities=33% Similarity=0.542 Sum_probs=10.6
Q ss_pred Cccccccccccc
Q psy14482 83 TGPVCLGCLKAI 94 (95)
Q Consensus 83 ~~~~c~~C~~~~ 94 (95)
.+.+|..|-||+
T Consensus 16 ~YRvC~~CgkPi 27 (44)
T 2lo3_A 16 QYRVCEKCGKPL 27 (44)
T ss_dssp CEEECTTTCCEE
T ss_pred cchhhcccCCcc
Confidence 689999999986
No 45
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=39.96 E-value=17 Score=19.06 Aligned_cols=24 Identities=29% Similarity=0.675 Sum_probs=16.6
Q ss_pred CCCcCcccCccc---cCCCCCCCceeecC
Q psy14482 2 FDNICGLCGETA---KQKCSGCQLIYYCC 27 (95)
Q Consensus 2 ~~~~C~~C~~~~---~~~C~~c~~~~ycs 27 (95)
.++.|..|++.. ...| +|. ..||+
T Consensus 14 ~~~rC~~C~kkvgl~~f~C-rCg-~~FC~ 40 (64)
T 1wg2_A 14 PNNRCFSCNKKVGVMGFKC-KCG-STFCG 40 (64)
T ss_dssp CSCSCTTTCCCCTTSCEEC-TTS-CEECS
T ss_pred cCCcChhhCCcccccCeEe-ecC-CEecc
Confidence 467899999862 3577 676 55675
No 46
>2yqp_A Probable ATP-dependent RNA helicase DDX59; structure genomics, ZF-HIT domain, DEAD box polypeptide 59 isoform 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.74 E-value=37 Score=17.40 Aligned_cols=34 Identities=24% Similarity=0.495 Sum_probs=25.6
Q ss_pred CCcCcccCccccCCCCCCCceeecCHHHHHhhhhc
Q psy14482 3 DNICGLCGETAKQKCSGCQLIYYCCREHQKIHWKK 37 (95)
Q Consensus 3 ~~~C~~C~~~~~~~C~~c~~~~ycs~~cq~~~w~~ 37 (95)
++.|.+|++..-..|..=- ---||-+|.+.+-..
T Consensus 19 ePvCvvCGryGeYICd~Td-~DVCSlECK~~~l~~ 52 (60)
T 2yqp_A 19 EPICVVCGRYGEYICDKTD-EDVCSLECKAKHLLQ 52 (60)
T ss_dssp SCCCSSSSSCCSEECSSSC-CEESSHHHHHHHHHH
T ss_pred CceEEEecCccceeecCCC-cchhhHHHHHHHHHH
Confidence 5789999988877776642 567899998877644
No 47
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=36.86 E-value=27 Score=17.62 Aligned_cols=22 Identities=18% Similarity=0.537 Sum_probs=15.7
Q ss_pred CCCcCcccCccc-cCCCCCCCce
Q psy14482 2 FDNICGLCGETA-KQKCSGCQLI 23 (95)
Q Consensus 2 ~~~~C~~C~~~~-~~~C~~c~~~ 23 (95)
+...|.+|+... +..|.+|..+
T Consensus 8 ~~~~C~vC~~~g~ll~Cd~C~~~ 30 (61)
T 1mm2_A 8 HMEFCRVCKDGGELLCCDTCPSS 30 (61)
T ss_dssp SCSSCTTTCCCSSCBCCSSSCCC
T ss_pred CCCcCCCCCCCCCEEEcCCCCHH
Confidence 456788998764 7788887644
No 48
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=36.85 E-value=21 Score=19.25 Aligned_cols=24 Identities=25% Similarity=0.630 Sum_probs=15.5
Q ss_pred CCCcCcccCccc---cCCCCCCCceeecC
Q psy14482 2 FDNICGLCGETA---KQKCSGCQLIYYCC 27 (95)
Q Consensus 2 ~~~~C~~C~~~~---~~~C~~c~~~~ycs 27 (95)
.++.|..|++.. ...| +|. ..||+
T Consensus 24 ~~~RC~~C~kkvgL~~f~C-rCg-~~FCs 50 (74)
T 1wfp_A 24 TATRCLSCNKKVGVTGFKC-RCG-STFCG 50 (74)
T ss_dssp CCCBCSSSCCBCTTTCEEC-TTS-CEECT
T ss_pred cCccchhhcCcccccceEe-ccC-CEecc
Confidence 457788888762 3567 565 55665
No 49
>3c5k_A HD6, histone deacetylase 6; HDAC6, zinc finger, actin-binding, chromatin regulator, cytoplasm, hydrolase, metal-binding, nucleus, phosphoprotein; 1.55A {Homo sapiens} PDB: 3gv4_A 3phd_A
Probab=36.13 E-value=16 Score=20.96 Aligned_cols=34 Identities=29% Similarity=0.683 Sum_probs=25.0
Q ss_pred CCcCcccCccc-cCCCCCCCceeecC---HHHHHhhhhc
Q psy14482 3 DNICGLCGETA-KQKCSGCQLIYYCC---REHQKIHWKK 37 (95)
Q Consensus 3 ~~~C~~C~~~~-~~~C~~c~~~~ycs---~~cq~~~w~~ 37 (95)
...|..|+... +-.|..|..+. |+ ..|-..|+++
T Consensus 24 ~~~C~~C~~~~~~W~CL~CG~vg-Cgr~~~~HA~~H~~~ 61 (109)
T 3c5k_A 24 TQPCGDCGTIQENWVCLSCYQVY-CGRYINGHMLQHHGN 61 (109)
T ss_dssp TCCCTTTCCCSSEEEETTTCCEE-ECTTTTCHHHHHHHH
T ss_pred CCcCccccCCCCeeeeeecCccc-cCCCcChHHHHHhcc
Confidence 45799999864 56799999888 87 4566666664
No 50
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.95 E-value=25 Score=17.31 Aligned_cols=22 Identities=18% Similarity=0.782 Sum_probs=15.1
Q ss_pred CCCcCcccCccc-cCCCCCCCce
Q psy14482 2 FDNICGLCGETA-KQKCSGCQLI 23 (95)
Q Consensus 2 ~~~~C~~C~~~~-~~~C~~c~~~ 23 (95)
++..|.+|+... +..|..|...
T Consensus 8 ~~~~C~vC~~~g~ll~Cd~C~~~ 30 (56)
T 2yql_A 8 HEDFCSVCRKSGQLLMCDTCSRV 30 (56)
T ss_dssp SCCSCSSSCCSSCCEECSSSSCE
T ss_pred CCCCCccCCCCCeEEEcCCCCcc
Confidence 456788888764 6677777643
No 51
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=34.55 E-value=24 Score=18.07 Aligned_cols=22 Identities=23% Similarity=0.691 Sum_probs=15.9
Q ss_pred CCCcCcccCccc-cCCCCCCCce
Q psy14482 2 FDNICGLCGETA-KQKCSGCQLI 23 (95)
Q Consensus 2 ~~~~C~~C~~~~-~~~C~~c~~~ 23 (95)
++..|.+|+... +..|..|...
T Consensus 7 ~~~~C~vC~~~g~ll~CD~C~~~ 29 (66)
T 1xwh_A 7 NEDECAVCRDGGELICCDGCPRA 29 (66)
T ss_dssp CCCSBSSSSCCSSCEECSSCCCE
T ss_pred CCCCCccCCCCCCEEEcCCCChh
Confidence 456799998764 6778887653
No 52
>1jjd_A Metallothionein, SMTA; zinc finger, zinc cluster, metal binding PR; NMR {Synechococcus elongatus} SCOP: g.46.1.1
Probab=34.46 E-value=19 Score=18.29 Aligned_cols=14 Identities=29% Similarity=0.627 Sum_probs=11.6
Q ss_pred eeecCHHHHHhhhh
Q psy14482 23 IYYCCREHQKIHWK 36 (95)
Q Consensus 23 ~~ycs~~cq~~~w~ 36 (95)
.+|||++|-..|-.
T Consensus 28 K~YCSe~Ca~gH~~ 41 (55)
T 1jjd_A 28 LYYCSEACADGHTG 41 (55)
T ss_dssp CEESSHHHHHTSCS
T ss_pred eEEehHHHHccCCC
Confidence 58999999988744
No 53
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=33.23 E-value=26 Score=18.15 Aligned_cols=22 Identities=27% Similarity=0.954 Sum_probs=16.2
Q ss_pred CCcCcccCccc-cCCCCCCCcee
Q psy14482 3 DNICGLCGETA-KQKCSGCQLIY 24 (95)
Q Consensus 3 ~~~C~~C~~~~-~~~C~~c~~~~ 24 (95)
...|.+|+... +..|..|...+
T Consensus 12 ~~~C~vC~~~~~ll~Cd~C~~~~ 34 (66)
T 2lri_C 12 GARCGVCGDGTDVLRCTHCAAAF 34 (66)
T ss_dssp TCCCTTTSCCTTCEECSSSCCEE
T ss_pred CCCcCCCCCCCeEEECCCCCCce
Confidence 45699998764 77888887544
No 54
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=33.07 E-value=40 Score=17.58 Aligned_cols=25 Identities=24% Similarity=0.660 Sum_probs=16.9
Q ss_pred CCCcCcccCcc-c--cCCCCCCCceeecCH
Q psy14482 2 FDNICGLCGET-A--KQKCSGCQLIYYCCR 28 (95)
Q Consensus 2 ~~~~C~~C~~~-~--~~~C~~c~~~~ycs~ 28 (95)
.++.|..|++. . ...| +|. ..||+.
T Consensus 14 ~~~rC~~C~kkvgl~~f~C-rCg-~~FC~~ 41 (64)
T 1wfh_A 14 RPNRCTVCRKRVGLTGFMC-RCG-TTFCGS 41 (64)
T ss_dssp SCCCCTTTCCCCCTTCEEC-SSS-CEECTT
T ss_pred cCCcChhhCCccCccCEEe-ecC-CEeccc
Confidence 46789999986 3 3467 576 567753
No 55
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=32.37 E-value=26 Score=18.90 Aligned_cols=25 Identities=24% Similarity=0.643 Sum_probs=16.5
Q ss_pred CCCcCcccCcc-c--cCCCCCCCceeecCH
Q psy14482 2 FDNICGLCGET-A--KQKCSGCQLIYYCCR 28 (95)
Q Consensus 2 ~~~~C~~C~~~-~--~~~C~~c~~~~ycs~ 28 (95)
.+++|..|++. . ...|. |. ..||+.
T Consensus 24 ~~nRC~~CrKkvgL~gf~Cr-Cg-~~FCs~ 51 (74)
T 1wfl_A 24 KKNRCFMCRKKVGLTGFDCR-CG-NLFCGL 51 (74)
T ss_dssp CTTBCSSSCCBCGGGCEECT-TS-CEECSS
T ss_pred cCCcChhhCCcccccCeecC-CC-CEechh
Confidence 35688889886 2 35676 65 567753
No 56
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.37 E-value=19 Score=19.01 Aligned_cols=24 Identities=21% Similarity=0.566 Sum_probs=16.9
Q ss_pred CCCcCcccCccc-c-----CCCCCCCceeecC
Q psy14482 2 FDNICGLCGETA-K-----QKCSGCQLIYYCC 27 (95)
Q Consensus 2 ~~~~C~~C~~~~-~-----~~C~~c~~~~ycs 27 (95)
.++.|..|++.. + ..| +|. ..||+
T Consensus 14 ~~~rC~~C~kk~gL~~~egf~C-rCg-~~FC~ 43 (67)
T 1x4w_A 14 SRRRCFQCQTKLELVQQELGSC-RCG-YVFCM 43 (67)
T ss_dssp CTTBCSSSCCBCCHHHHHHHCC-SSS-CCCCT
T ss_pred cCCcchhhCCeecccccCceEe-cCC-CEehh
Confidence 467899999874 2 478 776 55675
No 57
>3tee_A Flagella basal BODY P-ring formation protein FLGA; chaperone, flagellar P-ring formation, flagellar FLGI protei periplasmic protein; 1.95A {Salmonella typhimurium}
Probab=30.46 E-value=18 Score=23.33 Aligned_cols=19 Identities=21% Similarity=0.405 Sum_probs=16.1
Q ss_pred ccccceEEEcCCCCCCcEE
Q psy14482 51 KVLGRYYIASRSIKAGEVV 69 (95)
Q Consensus 51 ~~~gR~~va~r~i~~geii 69 (95)
...+.++++++.|.+|++|
T Consensus 71 ~v~~~vvVa~r~i~rG~~I 89 (219)
T 3tee_A 71 QATGNYVAVAAPIARGGKL 89 (219)
T ss_dssp EEEEEEEEECSCBCTTCBC
T ss_pred EEEEEEEEEccCcCCCCcC
Confidence 3468899999999999977
No 58
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=28.31 E-value=35 Score=18.88 Aligned_cols=26 Identities=23% Similarity=0.756 Sum_probs=18.8
Q ss_pred CCCcCcccCccc-cCCCCCCCcee--ecC
Q psy14482 2 FDNICGLCGETA-KQKCSGCQLIY--YCC 27 (95)
Q Consensus 2 ~~~~C~~C~~~~-~~~C~~c~~~~--ycs 27 (95)
+...|.+|+... +..|..|-.+| ||-
T Consensus 24 n~~~C~vC~~~g~LL~CD~C~~~fH~~Cl 52 (88)
T 1fp0_A 24 SATICRVCQKPGDLVMCNQCEFCFHLDCH 52 (88)
T ss_dssp SSSCCSSSCSSSCCEECTTSSCEECTTSS
T ss_pred CCCcCcCcCCCCCEEECCCCCCceecccC
Confidence 456799999864 77888887654 553
No 59
>1ef4_A Subunit N, DNA-directed RNA polymerase; three helix bundle, zinc binding, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: a.4.11.1
Probab=27.97 E-value=26 Score=17.73 Aligned_cols=12 Identities=33% Similarity=0.678 Sum_probs=9.0
Q ss_pred CCCCcCcccCcc
Q psy14482 1 MFDNICGLCGET 12 (95)
Q Consensus 1 ~~~~~C~~C~~~ 12 (95)
|.|.+|..||+.
T Consensus 1 iiPVRCFTCGkv 12 (55)
T 1ef4_A 1 MIPVRCLSCGKP 12 (55)
T ss_dssp CCSSSCSCTTSC
T ss_pred CCCeecCCCCCC
Confidence 567788888875
No 60
>2con_A RUH-035 protein, NIN one binding protein; ribosome, RNA binding protein, unknown function, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.15.1
Probab=26.74 E-value=18 Score=19.68 Aligned_cols=17 Identities=29% Similarity=0.626 Sum_probs=8.9
Q ss_pred cCcccCcc----ccCCCCCCC
Q psy14482 5 ICGLCGET----AKQKCSGCQ 21 (95)
Q Consensus 5 ~C~~C~~~----~~~~C~~c~ 21 (95)
+|+-|++. +..-|..|.
T Consensus 17 rC~aCf~~t~~~~k~FCp~CG 37 (79)
T 2con_A 17 RCHGCFKTTSDMNRVFCGHCG 37 (79)
T ss_dssp ECSSSCCEESCSSCCSCSSSC
T ss_pred EecccceECCCcccccccccC
Confidence 45556653 244566554
No 61
>1twf_J DNA-directed RNA polymerases I, II, and III 8.3 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: a.4.11.1 PDB: 1i3q_J 1i6h_J 1k83_J* 1nik_J 1nt9_J 1pqv_J 1r5u_J 1r9s_J* 1r9t_J* 1sfo_J* 1twa_J* 1twc_J* 1i50_J* 1twg_J* 1twh_J* 1wcm_J 1y1v_J 1y1w_J 1y1y_J 1y77_J* ...
Probab=26.69 E-value=27 Score=18.62 Aligned_cols=12 Identities=25% Similarity=0.578 Sum_probs=9.5
Q ss_pred CCCCcCcccCcc
Q psy14482 1 MFDNICGLCGET 12 (95)
Q Consensus 1 ~~~~~C~~C~~~ 12 (95)
|+|.+|..||+.
T Consensus 2 iiPVRCFTCGkv 13 (70)
T 1twf_J 2 IVPVRCFSCGKV 13 (70)
T ss_dssp CCCSBCTTTCCB
T ss_pred CCCeecCCCCCC
Confidence 478888888875
No 62
>1p1p_A AA-conotoxin PIVA; neurotoxin, acetylcholine receptor binding, transcription regulation; HET: HYP; NMR {Conus purpurascens} SCOP: j.30.1.3
Probab=26.54 E-value=33 Score=14.26 Aligned_cols=20 Identities=30% Similarity=0.840 Sum_probs=12.3
Q ss_pred cCccccCCCCCCC---ceeecCH
Q psy14482 9 CGETAKQKCSGCQ---LIYYCCR 28 (95)
Q Consensus 9 C~~~~~~~C~~c~---~~~ycs~ 28 (95)
|++-+...|..|. ...||++
T Consensus 3 cg~ypnaachpc~c~~rp~yc~~ 25 (26)
T 1p1p_A 3 CGSYPNAACHPCSCKDRPSYCGQ 25 (26)
T ss_dssp STTSCCSSCCTTTSTTCCGGGCC
T ss_pred cccCCCccccccccCCCCCccCc
Confidence 6666666666664 3567753
No 63
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=26.28 E-value=36 Score=17.09 Aligned_cols=22 Identities=18% Similarity=0.599 Sum_probs=15.0
Q ss_pred CCCcCcccCccc-cCCCCCCCce
Q psy14482 2 FDNICGLCGETA-KQKCSGCQLI 23 (95)
Q Consensus 2 ~~~~C~~C~~~~-~~~C~~c~~~ 23 (95)
++..|.+|+... +..|..|...
T Consensus 10 ~~~~C~vC~~~g~ll~CD~C~~~ 32 (61)
T 2l5u_A 10 HQDYCEVCQQGGEIILCDTCPRA 32 (61)
T ss_dssp CCSSCTTTSCCSSEEECSSSSCE
T ss_pred CCCCCccCCCCCcEEECCCCChh
Confidence 456788888763 6677777653
No 64
>2ftc_B Mitochondrial ribosomal protein L2; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus} PDB: 3iy9_B
Probab=26.01 E-value=44 Score=20.02 Aligned_cols=18 Identities=33% Similarity=0.728 Sum_probs=16.1
Q ss_pred cceEEEcCCCCCCcEEEe
Q psy14482 54 GRYYIASRSIKAGEVVLR 71 (95)
Q Consensus 54 gR~~va~r~i~~geii~~ 71 (95)
-||++|++.++.||+|..
T Consensus 23 k~yIlAp~gl~~Gd~I~s 40 (136)
T 2ftc_B 23 KRWIIATENMQAGDTILN 40 (136)
T ss_pred eEEEEeecCCcCCCEEEE
Confidence 579999999999999975
No 65
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=25.01 E-value=38 Score=20.79 Aligned_cols=22 Identities=18% Similarity=0.622 Sum_probs=16.8
Q ss_pred CCCcCcccCccc-cCCCCCCCce
Q psy14482 2 FDNICGLCGETA-KQKCSGCQLI 23 (95)
Q Consensus 2 ~~~~C~~C~~~~-~~~C~~c~~~ 23 (95)
++..|.+|+..+ +..|.+|..+
T Consensus 3 ~~~~C~~C~~~g~ll~Cd~C~~~ 25 (184)
T 3o36_A 3 NEDWCAVCQNGGELLCCEKCPKV 25 (184)
T ss_dssp SCSSCTTTCCCSSCEECSSSSCE
T ss_pred CCCccccCCCCCeeeecCCCCcc
Confidence 567899999874 6788888754
No 66
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.19 E-value=47 Score=18.22 Aligned_cols=21 Identities=29% Similarity=0.664 Sum_probs=15.4
Q ss_pred CCCcCcccCccc----cCCCCCCCc
Q psy14482 2 FDNICGLCGETA----KQKCSGCQL 22 (95)
Q Consensus 2 ~~~~C~~C~~~~----~~~C~~c~~ 22 (95)
+...|.+|+... +..|..|..
T Consensus 15 ~~~~C~vC~~~~~~~~ll~CD~C~~ 39 (92)
T 2e6r_A 15 DSYICQVCSRGDEDDKLLFCDGCDD 39 (92)
T ss_dssp CCCCCSSSCCSGGGGGCEECTTTCC
T ss_pred CCCCCccCCCcCCCCCEEEcCCCCc
Confidence 456799999864 678888764
No 67
>2if6_A Hypothetical protein YIIX; structural genomics, metalloprotein, PSI-2, PR structure initiative, NEW YORK SGX research center for STRU genomics; 1.80A {Escherichia coli} SCOP: d.3.1.21
Probab=24.05 E-value=39 Score=20.73 Aligned_cols=14 Identities=7% Similarity=0.333 Sum_probs=11.0
Q ss_pred CCCCCCcEEEeeCC
Q psy14482 61 RSIKAGEVVLREPP 74 (95)
Q Consensus 61 r~i~~geii~~E~p 74 (95)
.++++||+||.+..
T Consensus 3 ~~l~~GDlvf~~~~ 16 (186)
T 2if6_A 3 WQPQTGDIIFQISR 16 (186)
T ss_dssp CCCCTTCEEEECCC
T ss_pred ccCCCCCEEEEEcC
Confidence 46899999988754
No 68
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}
Probab=23.71 E-value=54 Score=20.20 Aligned_cols=19 Identities=26% Similarity=0.134 Sum_probs=15.9
Q ss_pred ccccceEEEcCCCCCCcEE
Q psy14482 51 KVLGRYYIASRSIKAGEVV 69 (95)
Q Consensus 51 ~~~gR~~va~r~i~~geii 69 (95)
+..|.++.|.+.|+.|+.+
T Consensus 37 ~~~G~GVfA~~~IpkGt~f 55 (170)
T 3ep0_A 37 PGEGLGIFSKTWIKAGTEM 55 (170)
T ss_dssp SSCSEEEEESSCBCTTCEE
T ss_pred CCCceEEEECcccCCCCEE
Confidence 3458999999999998865
No 69
>1ee8_A MUTM (FPG) protein; beta sandwich, zinc finger, helix two-turns helix, riken STR genomics/proteomics initiative, RSGI, structural genomics; 1.90A {Thermus thermophilus} SCOP: a.156.1.2 b.113.1.1 g.39.1.8
Probab=23.41 E-value=17 Score=24.05 Aligned_cols=29 Identities=17% Similarity=0.371 Sum_probs=17.5
Q ss_pred CcCcccCccccCCCCCCCceeecCHHHHHh
Q psy14482 4 NICGLCGETAKQKCSGCQLIYYCCREHQKI 33 (95)
Q Consensus 4 ~~C~~C~~~~~~~C~~c~~~~ycs~~cq~~ 33 (95)
..|..|+.+-.+.=-+-+..+|| +.||+.
T Consensus 236 ~pC~~CG~~I~~~~~~gR~t~~C-P~CQ~~ 264 (266)
T 1ee8_A 236 LPCPACGRPVERRVVAGRGTHFC-PTCQGE 264 (266)
T ss_dssp SBCTTTCCBCEEEESSSCEEEEC-TTTTTC
T ss_pred CCCCCCCCEeeEEEECCCceEEC-CCCCCC
Confidence 34777777643333344667888 577763
No 70
>3w0f_A Endonuclease 8-like 3; helix two turns helix, zinc finger, DNA binding, hydrolase; 2.00A {Mus musculus}
Probab=23.00 E-value=17 Score=24.56 Aligned_cols=30 Identities=23% Similarity=0.482 Sum_probs=17.0
Q ss_pred cCcccCccccCCCC--CCCceeecCHHHHHhhh
Q psy14482 5 ICGLCGETAKQKCS--GCQLIYYCCREHQKIHW 35 (95)
Q Consensus 5 ~C~~C~~~~~~~C~--~c~~~~ycs~~cq~~~w 35 (95)
.|..|+.+-...-- .-++.+|| +.||+-|.
T Consensus 253 pC~~CGt~I~~~~~g~~gRsTyfC-p~~~~~~~ 284 (287)
T 3w0f_A 253 NCDQCHSKITVCRFGENSRMTYFC-PHCQKHHH 284 (287)
T ss_dssp BCTTTCCBCEEECSSTTCCCEEEC-TTTSCC--
T ss_pred CCCCCCCEEEEEEecCCCCCEEEC-CCcccccc
Confidence 58888875322111 14788899 56776553
No 71
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=22.66 E-value=47 Score=21.12 Aligned_cols=21 Identities=24% Similarity=0.600 Sum_probs=15.1
Q ss_pred CCcCcccCcc------ccCCCCCCCce
Q psy14482 3 DNICGLCGET------AKQKCSGCQLI 23 (95)
Q Consensus 3 ~~~C~~C~~~------~~~~C~~c~~~ 23 (95)
...|+.|+.. ....|..|..+
T Consensus 10 ~~~Cw~C~~~~~~~~~~~~fC~~c~~~ 36 (207)
T 3bvo_A 10 YPRCWNCGGPWGPGREDRFFCPQCRAL 36 (207)
T ss_dssp -CBCSSSCCBCCSSCSCCCBCTTTCCB
T ss_pred CCCCCCCCCCccccccccccccccccc
Confidence 4679999986 35678888754
No 72
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=22.53 E-value=43 Score=15.90 Aligned_cols=19 Identities=21% Similarity=0.641 Sum_probs=13.1
Q ss_pred cCcccCccc----cCCCCCCCce
Q psy14482 5 ICGLCGETA----KQKCSGCQLI 23 (95)
Q Consensus 5 ~C~~C~~~~----~~~C~~c~~~ 23 (95)
.|.+|+... +..|.+|...
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~ 24 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKA 24 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCE
T ss_pred CCCCCCCCCCCCCEEECCCCChh
Confidence 478888753 6678887643
No 73
>1rl2_A Protein (ribosomal protein L2); RNA-binding domain, peptidyltransferease center, X-RAY diffraction; 2.30A {Geobacillus stearothermophilus} SCOP: b.34.5.3 b.40.4.5 PDB: 1c04_A 487d_I
Probab=22.53 E-value=52 Score=19.72 Aligned_cols=21 Identities=29% Similarity=0.477 Sum_probs=17.1
Q ss_pred ccccceEEEcCCCCCCcEEEe
Q psy14482 51 KVLGRYYIASRSIKAGEVVLR 71 (95)
Q Consensus 51 ~~~gR~~va~r~i~~geii~~ 71 (95)
+..-|+++|++.++.||+|..
T Consensus 38 dg~k~yIlAp~gl~~Gd~I~~ 58 (137)
T 1rl2_A 38 DGEKRYIIAPKNLKVGMEIMS 58 (137)
T ss_dssp TSCEEEEECCTTCCTTCEECB
T ss_pred CCCEEEEEecccCccceEEEE
Confidence 334689999999999999963
No 74
>1ynw_B Retinoic acid receptor RXR-alpha, retinoid X receptor; VDR, nuclear receptor, protein-DNA complex, transcripti complex; 3.00A {Homo sapiens} SCOP: g.39.1.2
Probab=22.47 E-value=12 Score=21.12 Aligned_cols=24 Identities=29% Similarity=0.938 Sum_probs=15.8
Q ss_pred CCCcCcccCccc------cCCCCCCCceee
Q psy14482 2 FDNICGLCGETA------KQKCSGCQLIYY 25 (95)
Q Consensus 2 ~~~~C~~C~~~~------~~~C~~c~~~~y 25 (95)
.+..|.+|+.++ ...|.+|+..+-
T Consensus 2 ~~~~C~VCg~~a~g~hyGv~sC~aCk~FFR 31 (99)
T 1ynw_B 2 TKHICAICGDRSSGKHYGVYSCEGCKGFFK 31 (99)
T ss_dssp ---CBTTTBSCCCBCCTTSCBCSHHHHHHH
T ss_pred CCCCCceeCCCCcceeeCccchHHHHHHHH
Confidence 456799999864 678888876543
No 75
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=21.94 E-value=46 Score=16.69 Aligned_cols=22 Identities=23% Similarity=0.587 Sum_probs=15.9
Q ss_pred CCCcCcccCcc------ccCCCCCCCce
Q psy14482 2 FDNICGLCGET------AKQKCSGCQLI 23 (95)
Q Consensus 2 ~~~~C~~C~~~------~~~~C~~c~~~ 23 (95)
+...|.+|+.. .+..|.+|...
T Consensus 5 ~~~~C~vC~~~~~~~~~~ll~Cd~C~~~ 32 (66)
T 2yt5_A 5 SSGVCTICQEEYSEAPNEMVICDKCGQG 32 (66)
T ss_dssp CCCCBSSSCCCCCBTTBCEEECSSSCCE
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCChH
Confidence 35679999875 26788888754
No 76
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=21.79 E-value=50 Score=18.95 Aligned_cols=22 Identities=23% Similarity=0.537 Sum_probs=14.2
Q ss_pred CCCcCcccCccc------cCCCCCCCce
Q psy14482 2 FDNICGLCGETA------KQKCSGCQLI 23 (95)
Q Consensus 2 ~~~~C~~C~~~~------~~~C~~c~~~ 23 (95)
.+..|..||... ..+|..|++-
T Consensus 66 ~p~~C~~CG~~F~~~~~kPsrCP~CkSe 93 (105)
T 2gmg_A 66 KPAQCRKCGFVFKAEINIPSRCPKCKSE 93 (105)
T ss_dssp CCCBBTTTCCBCCCCSSCCSSCSSSCCC
T ss_pred ECcChhhCcCeecccCCCCCCCcCCCCC
Confidence 467788888753 3467777643
No 77
>3mhs_E SAGA-associated factor 73; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3mhh_E 4fip_D 4fjc_D 4fk5_E 3m99_D
Probab=21.36 E-value=26 Score=19.82 Aligned_cols=12 Identities=33% Similarity=0.542 Sum_probs=10.9
Q ss_pred Cccccccccccc
Q psy14482 83 TGPVCLGCLKAI 94 (95)
Q Consensus 83 ~~~~c~~C~~~~ 94 (95)
.+.+|..|-+|+
T Consensus 74 ~YRvCn~CGkPI 85 (96)
T 3mhs_E 74 QYRVCEKCGKPL 85 (96)
T ss_dssp CCEEETTTCCEE
T ss_pred cchhhhccCCce
Confidence 689999999986
No 78
>2iyb_E Testin, TESS, TES; LIM domain, SH3-binding, tumour supressor LIM domain EVH1 DO cell motility, phosphorylation, cytoskeleton; 2.35A {Homo sapiens}
Probab=21.34 E-value=71 Score=15.70 Aligned_cols=9 Identities=33% Similarity=0.763 Sum_probs=5.1
Q ss_pred eecCHHHHH
Q psy14482 24 YYCCREHQK 32 (95)
Q Consensus 24 ~ycs~~cq~ 32 (95)
.||..+|.+
T Consensus 54 ~yC~~~C~~ 62 (65)
T 2iyb_E 54 VFCSVECKK 62 (65)
T ss_dssp EESSHHHHH
T ss_pred EecCHHHhh
Confidence 466666643
No 79
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens}
Probab=20.77 E-value=53 Score=20.82 Aligned_cols=19 Identities=11% Similarity=-0.095 Sum_probs=15.9
Q ss_pred ccccceEEEcCCCCCCcEE
Q psy14482 51 KVLGRYYIASRSIKAGEVV 69 (95)
Q Consensus 51 ~~~gR~~va~r~i~~geii 69 (95)
+..|.++.|.+.|+.|+.+
T Consensus 68 ~~~G~GVfa~~~IpkGt~f 86 (196)
T 3dal_A 68 SEEVIGVMSKEYIPKGTRF 86 (196)
T ss_dssp SCCEEEEEESSCBCTTEEE
T ss_pred CCceeEEEEccccCCCCEE
Confidence 3478999999999998865
Done!