Query psy14484
Match_columns 430
No_of_seqs 161 out of 1869
Neff 9.9
Searched_HMMs 46136
Date Fri Aug 16 21:00:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14484.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14484hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG4992 ArgD Ornithine/acetylo 100.0 6.9E-79 1.5E-83 556.1 40.3 382 6-429 17-400 (404)
2 COG0161 BioA Adenosylmethionin 100.0 2.2E-76 4.7E-81 552.5 42.7 410 14-429 27-445 (449)
3 COG0160 GabT 4-aminobutyrate a 100.0 4.5E-75 9.7E-80 547.7 44.7 398 12-428 37-446 (447)
4 PRK06943 adenosylmethionine--8 100.0 1.1E-70 2.3E-75 536.0 47.7 412 13-429 36-448 (453)
5 PRK05965 hypothetical protein; 100.0 1.2E-69 2.6E-74 530.2 47.0 412 13-429 28-449 (459)
6 PRK07482 hypothetical protein; 100.0 3.4E-69 7.3E-74 527.3 47.3 411 13-428 32-455 (461)
7 PRK08742 adenosylmethionine--8 100.0 4.9E-69 1.1E-73 525.1 47.5 412 14-429 47-469 (472)
8 PRK07030 adenosylmethionine--8 100.0 1.1E-68 2.4E-73 523.1 47.6 411 14-428 30-447 (466)
9 PRK07678 aminotransferase; Val 100.0 2.6E-68 5.6E-73 520.2 47.4 408 14-428 30-450 (451)
10 PRK07481 hypothetical protein; 100.0 3.1E-68 6.8E-73 519.3 47.9 411 13-428 24-446 (449)
11 PRK06916 adenosylmethionine--8 100.0 2.2E-68 4.8E-73 521.4 46.5 414 12-429 37-457 (460)
12 PRK07483 hypothetical protein; 100.0 4.1E-68 8.9E-73 517.1 47.4 412 11-429 10-439 (443)
13 PLN02760 4-aminobutyrate:pyruv 100.0 1.1E-67 2.3E-72 519.0 46.5 412 12-428 70-492 (504)
14 PRK07480 putative aminotransfe 100.0 2.1E-67 4.4E-72 513.4 47.2 409 13-428 32-449 (456)
15 PRK06917 hypothetical protein; 100.0 2.6E-67 5.6E-72 512.0 47.6 410 12-429 13-439 (447)
16 PRK07036 hypothetical protein; 100.0 3.8E-67 8.2E-72 512.9 48.5 411 13-428 33-453 (466)
17 PRK06105 aminotransferase; Pro 100.0 6.5E-67 1.4E-71 511.0 47.7 412 13-429 30-451 (460)
18 PRK13360 omega amino acid--pyr 100.0 1.6E-66 3.5E-71 505.7 47.8 413 12-429 27-442 (442)
19 PRK09221 beta alanine--pyruvat 100.0 2.1E-66 4.4E-71 505.4 47.4 412 12-428 30-444 (445)
20 PRK12403 putative aminotransfe 100.0 2.9E-66 6.3E-71 506.4 47.4 408 13-428 36-453 (460)
21 PRK06938 diaminobutyrate--2-ox 100.0 2.7E-66 5.8E-71 506.0 45.0 399 12-429 44-462 (464)
22 PRK06062 hypothetical protein; 100.0 4.9E-66 1.1E-70 503.6 46.0 400 12-428 34-446 (451)
23 PRK06541 hypothetical protein; 100.0 9.2E-66 2E-70 502.3 48.0 408 14-428 35-456 (460)
24 KOG1404|consensus 100.0 5.8E-67 1.3E-71 466.7 35.7 394 10-421 29-432 (442)
25 PRK06173 adenosylmethionine--8 100.0 6.1E-66 1.3E-70 499.2 45.4 398 15-429 28-427 (429)
26 PRK11522 putrescine--2-oxoglut 100.0 6.9E-66 1.5E-70 501.9 43.5 382 12-428 62-452 (459)
27 TIGR03372 putres_am_tran putre 100.0 8E-66 1.7E-70 497.8 43.2 368 26-425 67-442 (442)
28 PRK07986 adenosylmethionine--8 100.0 1.4E-65 3E-70 496.0 44.9 397 14-427 26-423 (428)
29 PRK06931 diaminobutyrate--2-ox 100.0 6.9E-65 1.5E-69 496.0 45.9 399 12-429 39-456 (459)
30 PRK05630 adenosylmethionine--8 100.0 1.2E-64 2.6E-69 489.8 44.7 398 12-427 21-420 (422)
31 PRK05964 adenosylmethionine--8 100.0 2.9E-64 6.4E-69 491.0 44.9 400 13-428 24-423 (423)
32 PRK05639 4-aminobutyrate amino 100.0 4E-64 8.7E-69 489.8 45.6 398 13-429 35-445 (457)
33 TIGR00709 dat 2,4-diaminobutyr 100.0 1.1E-63 2.3E-68 487.5 45.9 399 12-429 20-437 (442)
34 PRK06058 4-aminobutyrate amino 100.0 9.4E-64 2E-68 488.5 45.1 397 12-428 37-443 (443)
35 PRK08593 4-aminobutyrate amino 100.0 2.3E-63 5E-68 484.5 46.3 399 13-429 24-431 (445)
36 KOG1402|consensus 100.0 3.6E-64 7.8E-69 438.3 33.3 386 7-426 35-426 (427)
37 PRK06082 4-aminobutyrate amino 100.0 5.4E-63 1.2E-67 482.7 45.4 395 13-429 54-453 (459)
38 PRK05769 4-aminobutyrate amino 100.0 1.7E-62 3.7E-67 477.9 45.8 398 12-429 35-441 (441)
39 PRK07495 4-aminobutyrate amino 100.0 1.9E-62 4.2E-67 475.4 45.0 390 14-428 23-422 (425)
40 PRK08117 4-aminobutyrate amino 100.0 4E-62 8.8E-67 477.4 45.9 398 14-429 26-431 (433)
41 PRK04612 argD acetylornithine 100.0 4.6E-62 9.9E-67 470.3 43.8 383 11-429 20-405 (408)
42 PRK08360 4-aminobutyrate amino 100.0 1.7E-61 3.7E-66 470.6 46.7 398 12-428 22-427 (443)
43 TIGR00700 GABAtrnsam 4-aminobu 100.0 1.1E-61 2.4E-66 472.0 45.5 397 11-426 13-419 (420)
44 COG0001 HemL Glutamate-1-semia 100.0 4.2E-62 9.2E-67 450.5 39.8 390 4-429 26-430 (432)
45 PRK06918 4-aminobutyrate amino 100.0 3.1E-61 6.8E-66 472.3 46.5 398 13-428 36-444 (451)
46 PRK06777 4-aminobutyrate amino 100.0 2.2E-61 4.7E-66 468.9 44.6 388 14-426 23-420 (421)
47 TIGR03246 arg_catab_astC succi 100.0 1.8E-61 3.9E-66 467.9 43.7 381 10-428 14-396 (397)
48 PRK09792 4-aminobutyrate trans 100.0 5.1E-61 1.1E-65 466.3 43.8 389 13-426 22-420 (421)
49 TIGR02407 ectoine_ectB diamino 100.0 4.6E-61 1E-65 465.3 42.1 383 12-427 16-412 (412)
50 PRK04013 argD acetylornithine/ 100.0 5.2E-61 1.1E-65 454.1 40.5 357 12-429 5-362 (364)
51 TIGR00508 bioA adenosylmethion 100.0 2.2E-60 4.8E-65 461.7 45.6 396 15-427 29-426 (427)
52 KOG1401|consensus 100.0 5.9E-61 1.3E-65 431.7 36.5 389 6-428 31-431 (433)
53 PRK06148 hypothetical protein; 100.0 1.8E-60 3.9E-65 502.7 46.2 396 12-429 605-1012(1013)
54 PRK09264 diaminobutyrate--2-ox 100.0 1.7E-60 3.7E-65 463.6 42.0 385 12-429 20-418 (425)
55 PRK08297 L-lysine aminotransfe 100.0 4.2E-60 9.1E-65 460.9 44.0 399 12-428 23-442 (443)
56 TIGR00699 GABAtrns_euk 4-amino 100.0 2.7E-60 5.8E-65 459.6 42.2 388 12-425 39-464 (464)
57 PRK03715 argD acetylornithine 100.0 2.1E-60 4.6E-65 457.7 41.3 375 10-428 15-394 (395)
58 PRK12381 bifunctional succinyl 100.0 4.7E-60 1E-64 459.3 43.0 380 11-428 19-400 (406)
59 PLN02974 adenosylmethionine-8- 100.0 7E-60 1.5E-64 480.7 46.0 412 13-425 339-816 (817)
60 PLN00144 acetylornithine trans 100.0 3.3E-60 7.2E-65 455.3 41.1 370 18-428 2-381 (382)
61 PRK12389 glutamate-1-semialdeh 100.0 1.1E-59 2.3E-64 458.0 42.4 385 4-428 25-428 (428)
62 PLN02482 glutamate-1-semialdeh 100.0 3.4E-59 7.5E-64 454.9 41.9 393 3-428 71-474 (474)
63 PLN02624 ornithine-delta-amino 100.0 2.3E-58 5.1E-63 452.9 45.5 386 11-428 55-445 (474)
64 PRK00615 glutamate-1-semialdeh 100.0 6.4E-58 1.4E-62 442.8 42.7 388 4-429 26-430 (433)
65 TIGR03251 LAT_fam L-lysine 6-t 100.0 5.6E-58 1.2E-62 445.9 41.8 394 12-423 16-430 (431)
66 PRK01278 argD acetylornithine 100.0 1.2E-57 2.5E-62 441.9 43.8 377 10-428 10-389 (389)
67 PRK04073 rocD ornithine--oxo-a 100.0 8.4E-58 1.8E-62 443.1 41.5 374 10-425 19-395 (396)
68 PRK07046 aminotransferase; Val 100.0 2.3E-57 5E-62 441.9 43.4 378 12-429 56-452 (453)
69 PRK06149 hypothetical protein; 100.0 2.9E-57 6.3E-62 478.5 46.5 395 12-428 566-971 (972)
70 PF00202 Aminotran_3: Aminotra 100.0 7.8E-59 1.7E-63 438.3 30.6 336 16-369 1-338 (339)
71 PRK05093 argD bifunctional N-s 100.0 1.1E-55 2.4E-60 429.3 43.5 381 11-429 20-402 (403)
72 PRK03244 argD acetylornithine 100.0 9.7E-55 2.1E-59 422.9 42.9 371 11-428 23-395 (398)
73 TIGR01885 Orn_aminotrans ornit 100.0 5.9E-54 1.3E-58 417.1 44.0 381 11-425 17-400 (401)
74 PRK02936 argD acetylornithine 100.0 5.1E-54 1.1E-58 415.0 42.1 367 11-425 9-377 (377)
75 PRK08088 4-aminobutyrate amino 100.0 1.1E-53 2.4E-58 416.9 44.6 391 13-428 23-424 (425)
76 TIGR00713 hemL glutamate-1-sem 100.0 7.8E-54 1.7E-58 419.2 41.9 379 11-428 28-423 (423)
77 PRK00062 glutamate-1-semialdeh 100.0 1.4E-53 3.1E-58 415.5 41.0 385 7-428 26-425 (426)
78 KOG1403|consensus 100.0 4E-55 8.6E-60 377.2 24.8 397 10-428 26-438 (452)
79 PRK00854 rocD ornithine--oxo-a 100.0 6.3E-53 1.4E-57 410.6 43.0 377 11-426 21-400 (401)
80 PTZ00125 ornithine aminotransf 100.0 3.2E-52 7E-57 405.8 43.4 383 10-428 10-396 (400)
81 PRK02627 acetylornithine amino 100.0 5.2E-52 1.1E-56 404.1 42.9 377 10-429 18-396 (396)
82 cd00610 OAT_like Acetyl ornith 100.0 1.9E-51 4.1E-56 402.6 42.8 392 12-425 17-413 (413)
83 PRK04260 acetylornithine amino 100.0 7.1E-51 1.5E-55 392.3 41.3 365 11-425 9-375 (375)
84 PRK06209 glutamate-1-semialdeh 100.0 9E-51 2E-55 395.4 40.1 370 12-428 29-406 (431)
85 TIGR00707 argD acetylornithine 100.0 6.8E-47 1.5E-51 366.1 40.7 371 11-425 7-379 (379)
86 KOG1405|consensus 100.0 1.7E-45 3.8E-50 324.1 24.6 390 17-427 59-483 (484)
87 PRK07505 hypothetical protein; 100.0 2.2E-35 4.9E-40 287.0 34.8 353 11-429 26-401 (402)
88 PLN02822 serine palmitoyltrans 100.0 8.1E-35 1.8E-39 286.5 33.8 351 15-430 94-480 (481)
89 PRK13393 5-aminolevulinate syn 100.0 2.3E-32 5E-37 266.2 34.1 333 32-428 43-397 (406)
90 TIGR01821 5aminolev_synth 5-am 100.0 1.2E-31 2.6E-36 261.1 34.7 333 32-428 43-397 (402)
91 PRK09064 5-aminolevulinate syn 100.0 1.4E-31 3E-36 261.2 34.3 332 33-428 45-398 (407)
92 COG0156 BioF 7-keto-8-aminopel 100.0 4.1E-30 9E-35 240.9 32.3 330 29-424 34-387 (388)
93 PLN03227 serine palmitoyltrans 100.0 3E-30 6.5E-35 248.8 31.6 338 37-429 1-384 (392)
94 PRK07179 hypothetical protein; 100.0 7.4E-30 1.6E-34 248.8 34.6 341 8-428 39-399 (407)
95 PLN02955 8-amino-7-oxononanoat 100.0 5.5E-30 1.2E-34 245.4 32.6 336 33-427 101-461 (476)
96 PRK05958 8-amino-7-oxononanoat 100.0 1.7E-29 3.7E-34 245.2 34.5 342 15-425 24-385 (385)
97 TIGR01822 2am3keto_CoA 2-amino 100.0 4.8E-29 1E-33 242.5 34.8 348 13-428 20-390 (393)
98 TIGR01825 gly_Cac_T_rel pyrido 100.0 7.6E-29 1.7E-33 240.5 34.6 346 13-428 16-382 (385)
99 PRK06939 2-amino-3-ketobutyrat 100.0 3.2E-28 6.9E-33 237.2 35.5 346 15-428 26-394 (397)
100 COG0436 Aspartate/tyrosine/aro 100.0 4.9E-28 1.1E-32 232.0 32.2 337 34-428 28-392 (393)
101 PRK13392 5-aminolevulinate syn 100.0 4.7E-28 1E-32 236.4 32.5 333 32-428 44-398 (410)
102 TIGR00858 bioF 8-amino-7-oxono 100.0 3.6E-27 7.9E-32 226.8 34.0 335 18-422 4-360 (360)
103 KOG1359|consensus 100.0 1.5E-27 3.2E-32 206.2 25.4 340 13-426 48-411 (417)
104 PRK03317 histidinol-phosphate 100.0 2.8E-27 6.1E-32 227.8 29.5 325 35-427 27-364 (368)
105 COG1104 NifS Cysteine sulfinat 100.0 4.7E-27 1E-31 216.4 27.5 340 35-428 3-378 (386)
106 PRK01533 histidinol-phosphate 100.0 2.4E-27 5.2E-32 227.1 24.9 319 32-426 27-354 (366)
107 PRK05937 8-amino-7-oxononanoat 100.0 5.4E-26 1.2E-30 218.6 33.4 323 33-428 3-351 (370)
108 PRK06225 aspartate aminotransf 100.0 4.3E-26 9.3E-31 220.5 31.3 335 32-428 26-377 (380)
109 COG0079 HisC Histidinol-phosph 100.0 4.7E-26 1E-30 214.5 29.2 321 35-427 23-354 (356)
110 PLN02483 serine palmitoyltrans 100.0 3.4E-25 7.4E-30 218.8 35.8 347 15-428 80-467 (489)
111 PRK08153 histidinol-phosphate 100.0 5.5E-26 1.2E-30 218.5 28.5 327 32-428 29-366 (369)
112 PRK03158 histidinol-phosphate 100.0 4.3E-26 9.3E-31 219.0 26.9 316 34-424 29-358 (359)
113 PRK02731 histidinol-phosphate 100.0 1.2E-25 2.7E-30 216.5 29.1 325 32-426 30-365 (367)
114 cd06454 KBL_like KBL_like; thi 99.9 7.1E-25 1.5E-29 209.9 31.4 326 34-424 1-348 (349)
115 PRK06108 aspartate aminotransf 99.9 1.3E-24 2.9E-29 210.6 32.4 335 35-426 25-381 (382)
116 PLN00175 aminotransferase fami 99.9 2.1E-24 4.6E-29 210.1 32.9 335 34-426 54-412 (413)
117 PRK07682 hypothetical protein; 99.9 8.1E-25 1.8E-29 211.6 29.8 335 35-428 21-377 (378)
118 PRK00950 histidinol-phosphate 99.9 5.3E-25 1.1E-29 211.7 28.1 320 31-425 31-360 (361)
119 PRK06207 aspartate aminotransf 99.9 4.3E-24 9.4E-29 207.7 34.3 338 34-428 39-403 (405)
120 PRK02610 histidinol-phosphate 99.9 1.6E-24 3.5E-29 208.8 30.8 330 34-428 28-372 (374)
121 PRK14809 histidinol-phosphate 99.9 1.1E-24 2.3E-29 209.0 29.0 321 32-426 28-356 (357)
122 TIGR01141 hisC histidinol-phos 99.9 4.7E-25 1E-29 210.8 26.2 317 34-422 19-346 (346)
123 PRK07324 transaminase; Validat 99.9 1.1E-24 2.4E-29 209.6 27.6 337 28-427 20-370 (373)
124 PRK07681 aspartate aminotransf 99.9 5.9E-24 1.3E-28 206.8 32.7 334 32-423 30-384 (399)
125 PRK14807 histidinol-phosphate 99.9 4.2E-24 9.1E-29 204.2 30.9 320 35-425 23-350 (351)
126 PRK15481 transcriptional regul 99.9 2.3E-24 5.1E-29 211.6 29.3 314 52-426 100-430 (431)
127 PRK06358 threonine-phosphate d 99.9 6.8E-24 1.5E-28 202.8 31.3 321 34-425 19-353 (354)
128 PRK07309 aromatic amino acid a 99.9 1.5E-23 3.3E-28 203.3 34.0 341 34-428 30-389 (391)
129 PRK08056 threonine-phosphate d 99.9 4.2E-24 9E-29 204.6 29.7 326 31-426 17-354 (356)
130 PLN03026 histidinol-phosphate 99.9 3.9E-24 8.3E-29 206.3 29.1 320 32-424 50-379 (380)
131 PRK07366 succinyldiaminopimela 99.9 9.7E-24 2.1E-28 204.7 32.0 338 32-424 28-387 (388)
132 PRK09148 aminotransferase; Val 99.9 1E-23 2.2E-28 205.2 32.1 341 32-427 28-390 (405)
133 PRK05957 aspartate aminotransf 99.9 2.1E-23 4.5E-28 202.2 32.8 337 35-429 28-387 (389)
134 PRK08960 hypothetical protein; 99.9 4.6E-23 9.9E-28 199.8 33.8 335 33-426 31-386 (387)
135 TIGR03537 DapC succinyldiamino 99.9 3.6E-23 7.7E-28 197.8 32.3 333 36-423 2-349 (350)
136 PRK09105 putative aminotransfe 99.9 1.4E-23 3E-28 201.6 29.2 317 34-425 43-368 (370)
137 PRK09147 succinyldiaminopimela 99.9 3.5E-23 7.5E-28 201.3 31.9 335 32-426 27-395 (396)
138 PRK12414 putative aminotransfe 99.9 3.9E-23 8.4E-28 199.9 31.9 332 34-423 29-383 (384)
139 PRK10874 cysteine sulfinate de 99.9 6.7E-23 1.5E-27 199.8 33.8 338 32-428 18-399 (401)
140 PRK06290 aspartate aminotransf 99.9 4.5E-23 9.8E-28 200.3 32.3 347 32-429 42-407 (410)
141 PRK06348 aspartate aminotransf 99.9 4E-23 8.7E-28 199.9 31.8 332 35-424 30-382 (384)
142 COG1168 MalY Bifunctional PLP- 99.9 5.5E-23 1.2E-27 185.7 30.1 326 51-428 39-387 (388)
143 PRK03321 putative aminotransfe 99.9 5E-24 1.1E-28 204.1 24.3 317 35-426 23-350 (352)
144 TIGR03392 FeS_syn_CsdA cystein 99.9 1.2E-22 2.6E-27 197.8 34.4 338 32-428 15-396 (398)
145 PRK13355 bifunctional HTH-doma 99.9 2.2E-23 4.7E-28 208.7 29.8 341 32-427 144-514 (517)
146 cd00613 GDC-P Glycine cleavage 99.9 2E-23 4.3E-28 203.5 28.7 335 41-421 23-398 (398)
147 COG0520 csdA Selenocysteine ly 99.9 1.1E-22 2.5E-27 194.7 33.0 341 33-426 22-404 (405)
148 PRK08363 alanine aminotransfer 99.9 1.2E-22 2.6E-27 197.6 33.1 346 32-429 28-396 (398)
149 PRK04870 histidinol-phosphate 99.9 1.9E-23 4.1E-28 200.4 26.8 322 33-425 25-356 (356)
150 PRK08636 aspartate aminotransf 99.9 1.9E-22 4.2E-27 196.3 34.3 346 32-427 31-400 (403)
151 PRK06425 histidinol-phosphate 99.9 3E-23 6.5E-28 196.7 27.7 302 35-425 17-331 (332)
152 PRK05387 histidinol-phosphate 99.9 3.1E-23 6.8E-28 198.8 27.7 322 33-426 23-352 (353)
153 PRK05764 aspartate aminotransf 99.9 1E-22 2.3E-27 198.0 31.5 344 32-427 29-391 (393)
154 PTZ00433 tyrosine aminotransfe 99.9 1.7E-22 3.6E-27 197.2 33.0 348 27-427 26-408 (412)
155 PRK05839 hypothetical protein; 99.9 7.9E-23 1.7E-27 197.0 30.2 330 32-426 22-373 (374)
156 PRK08361 aspartate aminotransf 99.9 9.5E-23 2.1E-27 197.9 30.8 338 34-427 33-390 (391)
157 PRK08068 transaminase; Reviewe 99.9 1.6E-22 3.4E-27 196.2 32.2 335 32-424 30-386 (389)
158 PRK05166 histidinol-phosphate 99.9 5.2E-23 1.1E-27 198.2 28.1 322 33-425 35-369 (371)
159 PRK08175 aminotransferase; Val 99.9 2.6E-22 5.6E-27 195.0 32.9 341 33-427 28-389 (395)
160 PRK01688 histidinol-phosphate 99.9 8.5E-24 1.8E-28 201.9 22.0 309 35-422 29-351 (351)
161 PRK09276 LL-diaminopimelate am 99.9 1.8E-22 3.9E-27 195.7 31.6 334 32-423 29-384 (385)
162 PRK09295 bifunctional cysteine 99.9 2.9E-22 6.3E-27 195.4 33.2 340 33-426 23-403 (406)
163 PRK05664 threonine-phosphate d 99.9 6.5E-23 1.4E-27 194.1 27.6 303 33-427 19-328 (330)
164 TIGR03402 FeS_nifS cysteine de 99.9 1.3E-22 2.8E-27 196.3 30.1 334 36-428 2-373 (379)
165 PRK07683 aminotransferase A; V 99.9 4.4E-22 9.5E-27 192.8 33.7 335 34-427 28-383 (387)
166 COG1167 ARO8 Transcriptional r 99.9 1.8E-22 4E-27 197.9 31.2 339 33-429 88-457 (459)
167 PF00155 Aminotran_1_2: Aminot 99.9 1E-22 2.2E-27 196.1 28.9 330 35-421 2-363 (363)
168 TIGR03576 pyridox_MJ0158 pyrid 99.9 6E-23 1.3E-27 194.3 26.6 302 46-425 28-345 (346)
169 TIGR03540 DapC_direct LL-diami 99.9 3.5E-22 7.5E-27 193.6 32.5 334 32-423 27-382 (383)
170 PRK08912 hypothetical protein; 99.9 3.8E-22 8.3E-27 193.4 32.5 337 34-427 26-386 (387)
171 PRK07550 hypothetical protein; 99.9 3.6E-22 7.9E-27 193.5 32.1 338 32-424 27-384 (386)
172 PRK06107 aspartate aminotransf 99.9 3.9E-22 8.4E-27 194.2 32.4 343 32-428 31-401 (402)
173 PRK05942 aspartate aminotransf 99.9 4.3E-22 9.2E-27 193.4 32.1 333 32-424 33-389 (394)
174 PLN02656 tyrosine transaminase 99.9 9.4E-22 2E-26 191.7 34.2 344 32-427 29-403 (409)
175 PRK09082 methionine aminotrans 99.9 2.9E-22 6.2E-27 194.1 30.3 333 33-423 29-385 (386)
176 PRK13520 L-tyrosine decarboxyl 99.9 2.8E-22 6.1E-27 193.6 30.1 323 50-426 31-370 (371)
177 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 3.1E-22 6.7E-27 192.1 30.1 319 52-425 11-355 (355)
178 PRK07568 aspartate aminotransf 99.9 8.2E-22 1.8E-26 192.0 33.3 338 33-428 29-393 (397)
179 PLN00145 tyrosine/nicotianamin 99.9 9.1E-22 2E-26 192.4 33.6 343 33-427 51-424 (430)
180 PLN02187 rooty/superroot1 99.9 2.6E-22 5.5E-27 197.6 29.5 324 52-427 85-438 (462)
181 PRK07392 threonine-phosphate d 99.9 4.4E-22 9.6E-27 191.0 30.3 323 33-425 21-357 (360)
182 TIGR01264 tyr_amTase_E tyrosin 99.9 4.1E-22 9E-27 194.1 30.4 341 33-428 30-400 (401)
183 PLN00143 tyrosine/nicotianamin 99.9 8.5E-22 1.8E-26 191.9 31.9 345 29-427 27-404 (409)
184 cd06502 TA_like Low-specificit 99.9 1.1E-22 2.4E-27 193.8 25.2 322 38-423 1-337 (338)
185 PRK14808 histidinol-phosphate 99.9 1.9E-22 4E-27 191.2 26.5 315 28-423 13-333 (335)
186 PLN02721 threonine aldolase 99.9 6.9E-22 1.5E-26 189.5 30.8 338 35-427 6-352 (353)
187 TIGR03538 DapC_gpp succinyldia 99.9 7.9E-22 1.7E-26 191.6 31.3 336 30-424 24-392 (393)
188 PTZ00377 alanine aminotransfer 99.9 9.4E-22 2E-26 195.4 32.3 328 53-429 91-477 (481)
189 PRK08354 putative aminotransfe 99.9 8.5E-22 1.8E-26 185.0 30.3 299 31-424 5-309 (311)
190 PRK06959 putative threonine-ph 99.9 2.8E-22 6.1E-27 190.2 27.2 304 33-428 23-334 (339)
191 KOG0257|consensus 99.9 3.5E-23 7.6E-28 188.8 19.8 325 54-422 48-414 (420)
192 cd00609 AAT_like Aspartate ami 99.9 1.9E-22 4.1E-27 193.1 26.2 296 74-422 37-349 (350)
193 PRK07777 aminotransferase; Val 99.9 1.7E-21 3.6E-26 189.0 32.4 335 35-425 25-384 (387)
194 TIGR03539 DapC_actino succinyl 99.9 6.3E-22 1.4E-26 189.7 28.7 318 32-421 19-356 (357)
195 TIGR01140 L_thr_O3P_dcar L-thr 99.9 2.5E-22 5.3E-27 190.3 25.1 298 34-421 17-329 (330)
196 PRK07337 aminotransferase; Val 99.9 1.4E-21 3.1E-26 189.6 31.0 336 33-425 29-387 (388)
197 PRK06836 aspartate aminotransf 99.9 2.5E-21 5.5E-26 187.9 32.3 335 34-427 33-391 (394)
198 PRK06855 aminotransferase; Val 99.9 1.9E-21 4.1E-26 190.6 31.6 348 32-429 30-431 (433)
199 PRK07865 N-succinyldiaminopime 99.9 1.3E-21 2.8E-26 188.2 29.7 318 32-422 25-363 (364)
200 PRK03967 histidinol-phosphate 99.9 5.7E-22 1.2E-26 188.3 26.8 309 32-426 16-333 (337)
201 PLN02450 1-aminocyclopropane-1 99.9 1.2E-21 2.6E-26 193.2 29.8 306 76-428 89-431 (468)
202 PLN02855 Bifunctional selenocy 99.9 1.7E-21 3.6E-26 191.2 30.7 342 33-427 32-418 (424)
203 PRK04635 histidinol-phosphate 99.9 2.3E-22 5E-27 192.4 23.7 310 34-424 31-352 (354)
204 cd06453 SufS_like Cysteine des 99.9 3.8E-21 8.2E-26 185.8 32.3 325 48-421 8-373 (373)
205 PRK02948 cysteine desulfurase; 99.9 2.4E-21 5.1E-26 187.6 30.6 336 35-428 2-375 (381)
206 TIGR01979 sufS cysteine desulf 99.9 8.8E-21 1.9E-25 185.1 34.8 342 34-428 19-402 (403)
207 PLN02672 methionine S-methyltr 99.9 2.1E-21 4.5E-26 201.9 31.5 345 27-427 690-1080(1082)
208 PRK09265 aminotransferase AlaT 99.9 2.8E-21 6.1E-26 188.3 30.8 344 32-428 31-402 (404)
209 TIGR01265 tyr_nico_aTase tyros 99.9 3.5E-21 7.6E-26 187.5 30.8 343 32-427 29-401 (403)
210 PLN02607 1-aminocyclopropane-1 99.9 4E-21 8.6E-26 188.0 31.2 303 74-427 96-437 (447)
211 PRK09257 aromatic amino acid a 99.9 1.7E-21 3.7E-26 189.4 28.4 336 35-425 27-396 (396)
212 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 1.6E-21 3.6E-26 187.5 27.8 298 77-427 51-368 (370)
213 PLN02376 1-aminocyclopropane-1 99.9 3.7E-21 8E-26 190.4 30.8 299 76-426 97-437 (496)
214 TIGR02326 transamin_PhnW 2-ami 99.9 3.6E-21 7.8E-26 185.1 29.9 301 76-426 34-361 (363)
215 PTZ00376 aspartate aminotransf 99.9 1.5E-21 3.2E-26 190.1 27.2 340 34-426 29-402 (404)
216 cd06451 AGAT_like Alanine-glyo 99.9 3.2E-21 7E-26 185.1 28.8 319 51-425 10-355 (356)
217 PLN02231 alanine transaminase 99.9 5E-21 1.1E-25 190.5 30.7 331 52-429 142-529 (534)
218 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 7.1E-21 1.5E-25 184.2 30.8 333 45-427 26-381 (387)
219 PRK04781 histidinol-phosphate 99.9 1.3E-21 2.9E-26 187.6 25.5 288 78-426 60-362 (364)
220 KOG1360|consensus 99.9 6.6E-21 1.4E-25 171.7 27.5 322 46-428 180-525 (570)
221 TIGR01976 am_tr_V_VC1184 cyste 99.9 1.1E-20 2.5E-25 184.0 31.8 330 34-421 18-397 (397)
222 TIGR01814 kynureninase kynuren 99.9 1.3E-20 2.9E-25 183.6 31.4 339 33-425 27-405 (406)
223 PRK07908 hypothetical protein; 99.9 9.3E-21 2E-25 181.2 29.4 310 33-426 21-346 (349)
224 PLN02409 serine--glyoxylate am 99.9 7.7E-21 1.7E-25 184.6 29.0 303 76-428 41-373 (401)
225 PRK10534 L-threonine aldolase; 99.9 2.4E-21 5.1E-26 184.2 24.9 320 36-426 1-332 (333)
226 KOG0259|consensus 99.9 1.6E-20 3.6E-25 168.5 28.1 318 53-427 81-433 (447)
227 TIGR03403 nifS_epsilon cystein 99.9 2.8E-20 6.1E-25 180.1 31.7 335 36-428 2-376 (382)
228 PF00266 Aminotran_5: Aminotra 99.9 2.3E-20 4.9E-25 180.1 29.8 320 48-417 8-371 (371)
229 TIGR02006 IscS cysteine desulf 99.9 2.5E-20 5.3E-25 181.5 30.1 336 34-428 4-378 (402)
230 PRK07590 L,L-diaminopimelate a 99.9 3.1E-20 6.7E-25 181.2 30.2 345 33-425 33-409 (409)
231 TIGR03812 tyr_de_CO2_Arch tyro 99.9 6.9E-20 1.5E-24 177.0 31.6 334 31-423 20-372 (373)
232 PRK09440 avtA valine--pyruvate 99.9 4.3E-20 9.3E-25 180.9 30.3 341 35-428 31-412 (416)
233 PRK13479 2-aminoethylphosphona 99.9 6.7E-20 1.5E-24 176.7 30.7 302 77-428 37-364 (368)
234 TIGR03542 DAPAT_plant LL-diami 99.9 5E-20 1.1E-24 179.4 27.5 340 32-425 31-402 (402)
235 TIGR01977 am_tr_V_EF2568 cyste 99.9 1.4E-19 3E-24 175.1 30.3 320 51-423 12-375 (376)
236 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 1.1E-19 2.5E-24 174.5 29.3 329 49-425 11-360 (361)
237 PLN02651 cysteine desulfurase 99.9 5.4E-20 1.2E-24 176.9 26.1 314 49-415 9-364 (364)
238 PLN02397 aspartate transaminas 99.9 5E-19 1.1E-23 172.9 29.7 302 74-426 92-420 (423)
239 KOG1549|consensus 99.9 5E-19 1.1E-23 164.0 27.6 345 34-428 44-419 (428)
240 PRK14012 cysteine desulfurase; 99.9 1.7E-18 3.7E-23 168.8 31.2 336 34-428 4-380 (404)
241 PRK08637 hypothetical protein; 99.8 1.4E-18 3E-23 168.4 29.3 307 74-428 45-387 (388)
242 TIGR01437 selA_rel uncharacter 99.8 5.6E-18 1.2E-22 162.0 32.4 326 34-424 8-362 (363)
243 PLN02368 alanine transaminase 99.8 4.8E-19 1E-23 171.2 24.5 249 74-367 108-393 (407)
244 PRK13238 tnaA tryptophanase/L- 99.8 6.5E-18 1.4E-22 165.4 32.7 333 54-426 58-432 (460)
245 PRK09275 aspartate aminotransf 99.8 9.2E-19 2E-23 172.0 26.4 334 49-428 111-518 (527)
246 PRK13034 serine hydroxymethylt 99.8 7.4E-18 1.6E-22 164.0 30.0 321 51-427 40-392 (416)
247 TIGR03801 asp_4_decarbox aspar 99.8 1.1E-18 2.4E-23 171.3 24.1 337 48-427 104-516 (521)
248 cd06450 DOPA_deC_like DOPA dec 99.8 5.5E-18 1.2E-22 162.0 25.9 291 74-423 35-344 (345)
249 cd00378 SHMT Serine-glycine hy 99.8 1.1E-17 2.4E-22 163.2 28.4 332 34-427 19-385 (402)
250 COG2008 GLY1 Threonine aldolas 99.8 8.2E-18 1.8E-22 152.1 24.5 330 37-425 2-341 (342)
251 cd00616 AHBA_syn 3-amino-5-hyd 99.8 1.8E-17 3.8E-22 159.0 28.0 291 75-422 16-352 (352)
252 PRK00011 glyA serine hydroxyme 99.8 5E-17 1.1E-21 159.2 31.3 333 34-427 25-389 (416)
253 COG3977 Alanine-alpha-ketoisov 99.8 2.5E-17 5.4E-22 143.6 25.4 343 42-428 29-412 (417)
254 cd00614 CGS_like CGS_like: Cys 99.8 4.8E-18 1E-22 163.2 22.6 286 73-425 36-368 (369)
255 TIGR01788 Glu-decarb-GAD gluta 99.8 1E-16 2.2E-21 155.2 31.0 340 51-428 53-430 (431)
256 PLN02242 methionine gamma-lyas 99.8 6.5E-18 1.4E-22 163.7 22.2 291 73-428 72-416 (418)
257 COG0075 Serine-pyruvate aminot 99.8 1E-16 2.3E-21 149.4 28.8 322 52-428 17-364 (383)
258 PRK02769 histidine decarboxyla 99.8 2.3E-16 4.9E-21 150.8 31.9 292 76-426 64-371 (380)
259 KOG0256|consensus 99.8 2.3E-16 5.1E-21 143.3 28.9 302 76-426 124-460 (471)
260 KOG0633|consensus 99.8 1.3E-17 2.8E-22 142.6 19.2 290 79-425 71-375 (375)
261 PTZ00094 serine hydroxymethylt 99.8 2.1E-16 4.5E-21 155.8 28.9 342 34-427 34-408 (452)
262 TIGR01325 O_suc_HS_sulf O-succ 99.8 6.4E-17 1.4E-21 155.8 24.7 252 72-387 49-318 (380)
263 KOG1368|consensus 99.8 6.3E-17 1.4E-21 141.0 21.5 333 35-426 22-367 (384)
264 PRK00451 glycine dehydrogenase 99.8 2.9E-16 6.2E-21 155.2 28.9 292 78-425 113-446 (447)
265 PLN03032 serine decarboxylase; 99.8 5.6E-16 1.2E-20 147.0 28.9 311 53-423 37-372 (374)
266 TIGR03235 DNA_S_dndA cysteine 99.8 1.7E-16 3.7E-21 152.1 25.5 297 49-397 8-321 (353)
267 PLN02414 glycine dehydrogenase 99.8 5.2E-16 1.1E-20 161.6 30.6 309 77-428 568-908 (993)
268 PRK04366 glycine dehydrogenase 99.8 5.3E-16 1.1E-20 153.6 29.3 336 50-428 81-449 (481)
269 PRK06767 methionine gamma-lyas 99.8 1.3E-16 2.8E-21 153.9 23.3 289 73-427 57-385 (386)
270 PRK08133 O-succinylhomoserine 99.8 4.9E-16 1.1E-20 149.9 25.2 287 73-426 57-389 (390)
271 PRK06234 methionine gamma-lyas 99.7 4.9E-16 1.1E-20 150.5 25.1 257 73-390 60-336 (400)
272 PRK08247 cystathionine gamma-s 99.7 7.2E-16 1.6E-20 147.8 25.9 236 72-369 47-288 (366)
273 PRK07049 methionine gamma-lyas 99.7 4.2E-16 9.1E-21 151.7 24.5 295 72-426 78-425 (427)
274 PRK08249 cystathionine gamma-s 99.7 4.3E-16 9.4E-21 150.3 24.2 252 73-387 60-329 (398)
275 PRK03080 phosphoserine aminotr 99.7 5E-16 1.1E-20 149.6 24.6 317 52-428 24-374 (378)
276 PRK13580 serine hydroxymethylt 99.7 4.5E-15 9.7E-20 143.2 30.2 301 82-427 100-445 (493)
277 cd00617 Tnase_like Tryptophana 99.7 1.1E-15 2.3E-20 147.8 26.0 352 28-427 14-408 (431)
278 PRK12566 glycine dehydrogenase 99.7 3.1E-15 6.6E-20 153.1 30.0 310 77-428 543-877 (954)
279 PRK11658 UDP-4-amino-4-deoxy-L 99.7 4E-15 8.6E-20 143.5 28.4 312 53-425 14-377 (379)
280 PRK08776 cystathionine gamma-s 99.7 3E-15 6.4E-20 144.8 26.5 254 72-388 55-327 (405)
281 KOG0634|consensus 99.7 6.2E-15 1.3E-19 135.2 26.7 288 96-428 126-467 (472)
282 TIGR02379 ECA_wecE TDP-4-keto- 99.7 1.1E-14 2.5E-19 139.7 29.9 312 53-425 11-375 (376)
283 PRK08045 cystathionine gamma-s 99.7 3.8E-15 8.2E-20 143.2 26.6 254 72-388 47-319 (386)
284 PRK07810 O-succinylhomoserine 99.7 2.9E-15 6.2E-20 144.9 25.8 257 72-387 65-340 (403)
285 TIGR02080 O_succ_thio_ly O-suc 99.7 1.5E-15 3.2E-20 146.0 23.4 253 72-387 46-317 (382)
286 KOG1358|consensus 99.7 9.9E-16 2.1E-20 138.4 20.4 341 28-429 88-467 (467)
287 PRK06460 hypothetical protein; 99.7 4.5E-15 9.8E-20 142.5 26.2 289 73-428 41-375 (376)
288 PRK07582 cystathionine gamma-l 99.7 4.5E-15 9.8E-20 142.1 26.1 279 72-422 46-364 (366)
289 PRK07504 O-succinylhomoserine 99.7 2.3E-15 5E-20 145.6 23.4 252 73-387 61-331 (398)
290 PRK05367 glycine dehydrogenase 99.7 1.4E-14 3E-19 151.8 30.7 313 77-428 542-876 (954)
291 TIGR00461 gcvP glycine dehydro 99.7 3.4E-14 7.4E-19 146.4 32.4 312 77-428 530-868 (939)
292 PRK07050 cystathionine beta-ly 99.7 6.6E-15 1.4E-19 142.1 25.8 293 72-429 60-393 (394)
293 TIGR01324 cysta_beta_ly_B cyst 99.7 3.2E-15 6.8E-20 143.2 23.1 289 73-427 46-376 (377)
294 TIGR01328 met_gam_lyase methio 99.7 3.3E-15 7.1E-20 144.1 23.0 291 72-427 54-390 (391)
295 PRK08861 cystathionine gamma-s 99.7 7.1E-15 1.5E-19 140.9 24.6 252 72-387 48-319 (388)
296 PLN03226 serine hydroxymethylt 99.7 2.9E-14 6.3E-19 140.1 29.2 322 50-426 45-418 (475)
297 PRK05968 hypothetical protein; 99.7 8.4E-15 1.8E-19 141.3 24.7 287 73-423 59-386 (389)
298 PLN02724 Molybdenum cofactor s 99.7 3.6E-14 7.9E-19 148.7 31.2 354 32-425 33-486 (805)
299 PRK07269 cystathionine gamma-s 99.7 5.9E-15 1.3E-19 140.8 22.8 234 72-369 49-288 (364)
300 PRK07503 methionine gamma-lyas 99.7 9.6E-15 2.1E-19 141.5 24.5 241 73-369 61-319 (403)
301 PRK07811 cystathionine gamma-s 99.7 9.5E-15 2.1E-19 140.9 23.9 252 73-387 57-327 (388)
302 TIGR01366 serC_3 phosphoserine 99.7 5E-15 1.1E-19 141.5 21.3 316 52-428 15-361 (361)
303 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.7 9.5E-14 2.1E-18 133.9 29.9 310 53-425 11-374 (375)
304 TIGR01364 serC_1 phosphoserine 99.7 3.3E-14 7.2E-19 134.9 26.3 315 52-426 4-347 (349)
305 PRK09028 cystathionine beta-ly 99.7 3.2E-14 7E-19 136.3 25.0 252 74-387 58-327 (394)
306 PRK08064 cystathionine beta-ly 99.7 4.4E-14 9.6E-19 136.4 26.2 287 73-424 50-383 (390)
307 PRK08574 cystathionine gamma-s 99.7 1.3E-14 2.8E-19 139.6 22.4 287 73-427 49-384 (385)
308 PRK06084 O-acetylhomoserine am 99.7 2.6E-14 5.6E-19 139.0 24.7 164 73-286 54-219 (425)
309 PRK05355 3-phosphoserine/phosp 99.7 2.2E-14 4.8E-19 136.8 23.5 316 51-426 14-357 (360)
310 PRK05967 cystathionine beta-ly 99.7 3.5E-14 7.7E-19 135.7 24.8 172 73-294 60-234 (395)
311 PLN02880 tyrosine decarboxylas 99.7 7.5E-14 1.6E-18 137.8 27.8 325 75-429 120-486 (490)
312 PLN02263 serine decarboxylase 99.7 3.4E-13 7.4E-18 129.9 31.1 292 76-426 132-442 (470)
313 TIGR03588 PseC UDP-4-keto-6-de 99.7 2.1E-13 4.5E-18 132.0 30.0 314 53-425 10-380 (380)
314 TIGR01326 OAH_OAS_sulfhy OAH/O 99.7 2.8E-14 6E-19 139.1 23.6 166 72-287 52-219 (418)
315 PRK05994 O-acetylhomoserine am 99.7 5.3E-14 1.2E-18 137.1 25.4 163 73-285 59-223 (427)
316 TIGR01329 cysta_beta_ly_E cyst 99.6 5.5E-14 1.2E-18 135.2 24.4 285 74-427 44-375 (378)
317 KOG1357|consensus 99.6 1.4E-14 3E-19 133.4 18.4 325 35-425 137-500 (519)
318 PRK08248 O-acetylhomoserine am 99.6 6.9E-14 1.5E-18 136.2 23.8 164 73-286 60-225 (431)
319 PRK15407 lipopolysaccharide bi 99.6 6.9E-13 1.5E-17 129.6 30.0 300 77-426 63-435 (438)
320 PRK06702 O-acetylhomoserine am 99.6 1.6E-13 3.4E-18 132.7 24.7 162 74-284 58-221 (432)
321 TIGR03799 NOD_PanD_pyr putativ 99.6 1.1E-12 2.3E-17 130.0 30.6 315 75-420 127-518 (522)
322 cd00611 PSAT_like Phosphoserin 99.6 9E-14 1.9E-18 132.9 22.3 316 51-424 10-353 (355)
323 PLN02590 probable tyrosine dec 99.6 3.3E-12 7.1E-17 126.4 33.3 324 75-428 168-533 (539)
324 PLN02509 cystathionine beta-ly 99.6 2.5E-13 5.4E-18 132.5 25.0 284 75-427 131-461 (464)
325 PF01041 DegT_DnrJ_EryC1: DegT 99.6 4.6E-13 1E-17 128.5 26.1 310 54-422 6-363 (363)
326 PRK08134 O-acetylhomoserine am 99.6 1.9E-13 4.1E-18 133.1 23.1 163 73-285 60-224 (433)
327 PRK07812 O-acetylhomoserine am 99.6 2.6E-13 5.6E-18 132.0 23.8 165 73-286 65-231 (436)
328 PRK08114 cystathionine beta-ly 99.6 2.3E-13 4.9E-18 130.0 22.8 292 72-428 57-394 (395)
329 PRK04311 selenocysteine syntha 99.6 2.6E-12 5.7E-17 125.4 30.3 320 51-426 98-463 (464)
330 COG0399 WecE Predicted pyridox 99.6 1.7E-12 3.6E-17 121.6 27.6 310 53-427 15-373 (374)
331 PRK06176 cystathionine gamma-s 99.6 3.5E-13 7.6E-18 129.5 23.6 171 73-294 46-220 (380)
332 PRK05939 hypothetical protein; 99.6 3.2E-13 7E-18 130.3 23.2 163 73-286 43-207 (397)
333 KOG2862|consensus 99.6 1.1E-12 2.4E-17 115.5 24.1 282 95-427 69-382 (385)
334 PRK07671 cystathionine beta-ly 99.6 6.1E-13 1.3E-17 127.8 24.1 251 72-387 45-314 (377)
335 COG1003 GcvP Glycine cleavage 99.6 2E-12 4.4E-17 119.0 25.8 311 77-428 109-448 (496)
336 TIGR00474 selA seryl-tRNA(sec) 99.6 9.7E-12 2.1E-16 121.1 31.8 314 51-421 93-453 (454)
337 PF01053 Cys_Met_Meta_PP: Cys/ 99.6 1.2E-12 2.6E-17 124.8 24.6 289 71-426 49-386 (386)
338 COG1103 Archaea-specific pyrid 99.6 3.8E-12 8.1E-17 110.0 24.9 304 77-427 61-380 (382)
339 COG2873 MET17 O-acetylhomoseri 99.6 3.8E-13 8.2E-18 121.5 19.1 166 73-288 58-225 (426)
340 PRK13237 tyrosine phenol-lyase 99.6 2E-12 4.3E-17 123.6 24.8 345 31-427 42-433 (460)
341 TIGR02618 tyr_phenol_ly tyrosi 99.6 1.3E-12 2.9E-17 124.4 23.5 363 11-427 19-426 (450)
342 cd01494 AAT_I Aspartate aminot 99.6 2E-13 4.3E-18 116.2 16.3 166 80-286 3-170 (170)
343 cd00615 Orn_deC_like Ornithine 99.5 8.5E-14 1.8E-18 129.7 14.2 228 73-346 55-293 (294)
344 PRK05613 O-acetylhomoserine am 99.5 1.8E-12 3.9E-17 126.2 22.2 164 73-285 65-230 (437)
345 TIGR03531 selenium_SpcS O-phos 99.5 6.6E-12 1.4E-16 121.3 25.6 300 77-425 105-444 (444)
346 PRK06434 cystathionine gamma-l 99.5 1.2E-11 2.6E-16 118.3 22.5 248 73-387 60-320 (384)
347 COG0076 GadB Glutamate decarbo 99.4 3.9E-11 8.5E-16 116.8 24.0 280 52-369 75-380 (460)
348 COG3844 Kynureninase [Amino ac 99.4 4.3E-10 9.3E-15 100.1 28.0 341 28-428 26-403 (407)
349 COG0626 MetC Cystathionine bet 99.4 8.8E-11 1.9E-15 110.8 22.6 290 73-428 59-395 (396)
350 TIGR01365 serC_2 phosphoserine 99.4 1.3E-10 2.9E-15 110.4 24.0 317 52-427 15-373 (374)
351 PF12897 Aminotran_MocR: Alani 99.4 2.2E-10 4.8E-15 104.8 24.1 305 74-426 66-414 (425)
352 TIGR02617 tnaA_trp_ase tryptop 99.4 8.5E-11 1.8E-15 111.1 22.1 350 32-426 39-440 (467)
353 KOG0053|consensus 99.4 2.3E-10 5.1E-15 106.6 24.6 190 73-318 73-266 (409)
354 PF01212 Beta_elim_lyase: Beta 99.4 5.4E-13 1.2E-17 122.5 7.1 198 51-292 7-214 (290)
355 KOG0258|consensus 99.4 1.4E-09 3E-14 99.1 26.3 307 74-429 114-471 (475)
356 PLN02452 phosphoserine transam 99.3 4.5E-10 9.7E-15 106.9 22.8 327 36-426 8-362 (365)
357 PLN02414 glycine dehydrogenase 99.3 1.8E-09 4E-14 113.3 27.7 315 46-422 111-464 (993)
358 PRK05367 glycine dehydrogenase 99.3 2.6E-09 5.7E-14 112.6 27.9 285 77-422 121-437 (954)
359 PLN02271 serine hydroxymethylt 99.3 1.6E-09 3.5E-14 105.5 24.2 295 84-426 201-539 (586)
360 COG1448 TyrB Aspartate/tyrosin 99.2 2.9E-09 6.3E-14 97.4 21.8 276 97-424 97-395 (396)
361 PF01276 OKR_DC_1: Orn/Lys/Arg 99.2 7.1E-10 1.5E-14 105.6 18.3 234 75-348 64-317 (417)
362 PRK15029 arginine decarboxylas 99.2 3.7E-09 8.1E-14 108.0 24.1 305 77-425 205-602 (755)
363 PF00282 Pyridoxal_deC: Pyrido 99.2 1.7E-08 3.7E-13 96.6 26.3 240 77-348 79-354 (373)
364 PRK12462 phosphoserine aminotr 99.2 2.2E-08 4.8E-13 94.4 25.0 312 52-426 16-361 (364)
365 COG0112 GlyA Glycine/serine hy 99.1 8.3E-08 1.8E-12 88.4 26.6 319 50-426 37-389 (413)
366 PF00464 SHMT: Serine hydroxym 99.1 3.4E-09 7.4E-14 100.5 18.1 319 51-419 32-397 (399)
367 TIGR03811 tyr_de_CO2_Ent tyros 99.1 1.6E-07 3.5E-12 94.3 29.0 245 74-348 120-475 (608)
368 KOG2040|consensus 99.1 3.2E-08 7E-13 95.6 22.6 312 77-428 582-919 (1001)
369 PRK13578 ornithine decarboxyla 99.1 3.9E-08 8.5E-13 99.7 24.0 303 77-424 174-562 (720)
370 COG3033 TnaA Tryptophanase [Am 99.0 1.4E-07 3E-12 85.4 22.9 361 27-427 40-444 (471)
371 PRK15399 lysine decarboxylase 99.0 2.6E-07 5.6E-12 93.7 27.5 299 78-424 196-556 (713)
372 PRK15400 lysine decarboxylase 99.0 1.4E-07 3E-12 95.7 24.2 301 77-424 195-556 (714)
373 KOG1383|consensus 99.0 2E-07 4.3E-12 87.4 22.4 349 31-429 76-448 (491)
374 COG1921 SelA Selenocysteine sy 98.7 1.3E-06 2.8E-11 81.6 18.8 230 45-328 31-272 (395)
375 PF06838 Met_gamma_lyase: Meth 98.7 2.7E-06 5.8E-11 78.0 19.7 204 52-295 26-247 (403)
376 PF02347 GDC-P: Glycine cleava 98.7 3.4E-06 7.4E-11 80.7 20.4 287 77-421 110-429 (429)
377 KOG3846|consensus 98.6 2.4E-05 5.3E-10 69.6 22.7 344 46-429 74-463 (465)
378 TIGR00461 gcvP glycine dehydro 98.6 4.6E-05 9.9E-10 79.9 28.0 286 77-422 109-426 (939)
379 PF03841 SelA: L-seryl-tRNA se 98.6 1.5E-07 3.2E-12 87.1 8.6 231 46-326 11-260 (367)
380 COG0403 GcvP Glycine cleavage 98.6 7.8E-05 1.7E-09 69.8 25.9 295 77-425 120-448 (450)
381 PF05889 SLA_LP_auto_ag: Solub 98.5 2.3E-05 4.9E-10 73.4 20.8 222 187-426 140-389 (389)
382 KOG0628|consensus 98.4 0.00023 4.9E-09 67.2 23.7 229 187-428 218-472 (511)
383 PF04864 Alliinase_C: Allinase 98.4 4.3E-05 9.4E-10 69.7 17.4 280 77-423 46-361 (363)
384 COG1982 LdcC Arginine/lysine/o 98.3 0.0002 4.3E-09 70.4 21.8 160 77-275 70-236 (557)
385 KOG1412|consensus 98.3 0.00011 2.5E-09 65.7 17.5 278 99-428 104-406 (410)
386 COG1932 SerC Phosphoserine ami 98.2 0.0014 3E-08 60.6 24.0 202 201-427 144-363 (365)
387 KOG0629|consensus 98.1 0.00045 9.7E-09 64.6 19.5 316 82-425 146-507 (510)
388 KOG2467|consensus 98.0 0.0041 8.9E-08 57.2 22.4 288 88-426 97-425 (477)
389 PRK12566 glycine dehydrogenase 97.7 0.033 7.1E-07 58.9 26.4 282 77-422 124-439 (954)
390 COG4100 Cystathionine beta-lya 97.7 0.0016 3.5E-08 58.2 14.1 185 76-294 64-257 (416)
391 KOG1411|consensus 97.6 0.0013 2.8E-08 60.0 13.1 153 96-283 120-285 (427)
392 PLN02994 1-aminocyclopropane-1 97.3 0.001 2.3E-08 55.0 7.5 58 73-138 92-153 (153)
393 KOG3843|consensus 95.4 0.056 1.2E-06 47.7 6.8 56 187-246 142-197 (432)
394 KOG2040|consensus 89.6 26 0.00057 35.7 19.8 278 79-422 165-478 (1001)
395 COG0616 SppA Periplasmic serin 71.7 15 0.00032 34.6 7.1 83 199-295 95-179 (317)
396 COG1105 FruK Fructose-1-phosph 70.4 36 0.00077 31.7 9.0 55 185-244 113-167 (310)
397 smart00642 Aamy Alpha-amylase 62.5 25 0.00055 29.4 6.1 47 201-248 32-95 (166)
398 PF12138 Spherulin4: Spherulat 60.7 24 0.00053 31.9 6.0 53 187-240 17-71 (253)
399 PF13167 GTP-bdg_N: GTP-bindin 58.4 72 0.0016 23.9 7.1 57 187-244 9-66 (95)
400 TIGR03712 acc_sec_asp2 accesso 58.0 2E+02 0.0044 28.6 11.8 188 200-426 314-505 (511)
401 COG0108 RibB 3,4-dihydroxy-2-b 56.9 14 0.0003 31.7 3.5 37 199-241 154-190 (203)
402 PRK08883 ribulose-phosphate 3- 54.1 1.6E+02 0.0034 26.0 13.2 54 187-242 118-173 (220)
403 COG4294 Uve UV damage repair e 51.8 1.9E+02 0.0041 26.7 9.8 22 225-246 219-240 (347)
404 TIGR00629 uvde UV damage endon 51.4 2.1E+02 0.0046 26.8 11.8 22 225-246 201-222 (312)
405 KOG2862|consensus 50.9 1.7E+02 0.0036 27.4 9.4 71 45-117 38-114 (385)
406 COG0296 GlgB 1,4-alpha-glucan 49.3 20 0.00044 36.8 3.9 35 219-253 210-244 (628)
407 KOG3974|consensus 47.0 27 0.00058 31.4 3.8 49 187-243 91-139 (306)
408 COG0352 ThiE Thiamine monophos 43.9 57 0.0012 28.6 5.4 48 188-243 24-72 (211)
409 COG0529 CysC Adenylylsulfate k 43.0 1.3E+02 0.0028 25.7 7.0 66 361-428 23-91 (197)
410 PLN02672 methionine S-methyltr 42.5 2.2E+02 0.0047 31.8 10.5 24 91-114 446-469 (1082)
411 PF13481 AAA_25: AAA domain; P 41.7 61 0.0013 27.5 5.4 53 187-241 128-184 (193)
412 smart00839 ELFV_dehydrog Gluta 40.7 96 0.0021 23.5 5.6 48 382-429 39-96 (102)
413 TIGR00524 eIF-2B_rel eIF-2B al 40.7 3E+02 0.0065 25.7 9.9 37 207-246 205-242 (303)
414 PRK08535 translation initiatio 38.0 3.4E+02 0.0074 25.4 10.5 33 207-242 196-228 (310)
415 PRK13602 putative ribosomal pr 37.9 1.3E+02 0.0028 21.8 5.7 44 189-243 17-60 (82)
416 COG1197 Mfd Transcription-repa 37.8 2.3E+02 0.0051 31.5 9.7 136 92-271 614-750 (1139)
417 PRK08335 translation initiatio 37.5 3.3E+02 0.0071 25.0 10.2 33 207-242 185-217 (275)
418 KOG2792|consensus 37.4 1.1E+02 0.0023 27.7 6.0 88 27-118 123-226 (280)
419 PF02677 DUF208: Uncharacteriz 36.8 87 0.0019 26.5 5.2 42 195-243 18-62 (176)
420 PF00834 Ribul_P_3_epim: Ribul 36.6 1.2E+02 0.0026 26.4 6.2 70 38-116 32-103 (201)
421 PF07131 DUF1382: Protein of u 35.5 1.4E+02 0.003 20.0 5.7 39 381-428 13-51 (61)
422 TIGR00511 ribulose_e2b2 ribose 34.9 3.8E+02 0.0082 25.0 10.7 37 207-246 191-228 (301)
423 COG0821 gcpE 1-hydroxy-2-methy 33.8 4.1E+02 0.009 25.1 10.9 26 219-244 57-82 (361)
424 TIGR00612 ispG_gcpE 1-hydroxy- 33.6 3.3E+02 0.0072 25.7 8.8 26 218-243 54-79 (346)
425 PF07894 DUF1669: Protein of u 33.3 2.4E+02 0.0052 26.0 7.7 49 188-246 136-186 (284)
426 COG2515 Acd 1-aminocyclopropan 33.0 3.6E+02 0.0077 25.2 8.7 41 204-249 246-286 (323)
427 KOG2433|consensus 32.7 1.8E+02 0.0039 27.9 7.0 61 53-116 436-497 (577)
428 PF04748 Polysacc_deac_2: Dive 32.2 2.3E+02 0.0051 24.8 7.4 23 45-67 66-88 (213)
429 PF03652 UPF0081: Uncharacteri 32.1 2E+02 0.0042 23.2 6.4 56 187-246 39-98 (135)
430 PRK00014 ribB 3,4-dihydroxy-2- 30.5 71 0.0015 28.3 3.8 35 201-241 172-206 (230)
431 PRK11633 cell division protein 30.3 3.1E+02 0.0067 24.3 7.8 45 380-424 163-213 (226)
432 COG0514 RecQ Superfamily II DN 29.7 82 0.0018 32.3 4.6 72 190-285 98-174 (590)
433 TIGR03677 rpl7ae 50S ribosomal 29.2 1.8E+02 0.004 22.7 5.7 45 189-243 32-76 (117)
434 PF01248 Ribosomal_L7Ae: Ribos 29.0 2E+02 0.0044 21.1 5.8 45 189-244 21-66 (95)
435 PRK10785 maltodextrin glucosid 28.6 1.2E+02 0.0026 31.4 5.8 62 187-249 177-252 (598)
436 PRK00910 ribB 3,4-dihydroxy-2- 28.6 81 0.0018 27.7 3.9 35 201-241 168-202 (218)
437 PF04002 RadC: RadC-like JAB d 28.4 1.8E+02 0.004 22.8 5.6 46 189-239 55-103 (123)
438 PRK01792 ribB 3,4-dihydroxy-2- 28.3 82 0.0018 27.6 3.8 35 201-241 167-201 (214)
439 PRK09722 allulose-6-phosphate 28.3 4.3E+02 0.0093 23.5 12.2 51 187-242 120-175 (229)
440 COG4422 Bacteriophage protein 27.5 1.1E+02 0.0023 25.9 4.1 46 197-242 159-222 (250)
441 PF01008 IF-2B: Initiation fac 27.5 4.3E+02 0.0093 24.1 8.8 111 93-242 106-216 (282)
442 cd01840 SGNH_hydrolase_yrhL_li 26.9 1.8E+02 0.0038 23.6 5.6 49 189-242 67-115 (150)
443 TIGR00506 ribB 3,4-dihydroxy-2 26.9 90 0.002 27.0 3.8 35 201-241 157-191 (199)
444 PF00926 DHBP_synthase: 3,4-di 26.8 83 0.0018 27.1 3.6 36 200-241 151-186 (194)
445 KOG0352|consensus 26.4 1.2E+02 0.0026 29.6 4.7 58 199-271 111-169 (641)
446 PRK01018 50S ribosomal protein 26.2 2.5E+02 0.0054 21.1 5.7 42 189-241 22-63 (99)
447 PF00128 Alpha-amylase: Alpha 26.2 66 0.0014 29.5 3.2 28 221-248 50-77 (316)
448 PRK04175 rpl7ae 50S ribosomal 26.1 2.1E+02 0.0046 22.5 5.5 46 189-244 36-81 (122)
449 PF06153 DUF970: Protein of un 26.0 34 0.00074 26.3 1.0 47 380-426 13-65 (109)
450 PRK13601 putative L7Ae-like ri 25.5 2.7E+02 0.0058 20.2 6.0 44 190-244 15-58 (82)
451 PF05430 Methyltransf_30: S-ad 25.1 1.5E+02 0.0032 23.4 4.5 46 192-238 41-86 (124)
452 TIGR00140 hupD hydrogenase exp 24.5 3.6E+02 0.0077 21.3 9.3 48 82-140 3-50 (134)
453 PRK00366 ispG 4-hydroxy-3-meth 24.3 6.3E+02 0.014 24.1 9.3 26 218-243 62-87 (360)
454 KOG1465|consensus 24.1 5.9E+02 0.013 23.7 13.3 119 93-255 161-280 (353)
455 TIGR00250 RNAse_H_YqgF RNAse H 24.0 2.8E+02 0.0062 22.0 6.0 57 187-246 36-94 (130)
456 COG2022 ThiG Uncharacterized e 23.8 5.2E+02 0.011 23.1 7.8 21 227-250 173-193 (262)
457 COG1435 Tdk Thymidine kinase [ 23.2 5E+02 0.011 22.5 9.6 35 202-243 83-117 (201)
458 cd07571 ALP_N-acyl_transferase 23.1 2.2E+02 0.0047 25.9 5.9 53 187-241 24-77 (270)
459 PLN03244 alpha-amylase; Provis 23.1 1E+02 0.0022 32.8 4.0 33 220-252 438-470 (872)
460 cd01827 sialate_O-acetylestera 22.5 2E+02 0.0043 24.1 5.3 53 187-240 94-152 (188)
461 cd04937 ACT_AKi-DapG-BS_2 ACT 22.4 2.2E+02 0.0048 19.0 4.5 45 379-425 17-62 (64)
462 PRK03353 ribB 3,4-dihydroxy-2- 22.1 1.3E+02 0.0027 26.6 3.9 35 201-241 167-201 (217)
463 TIGR02402 trehalose_TreZ malto 22.0 1.1E+02 0.0024 31.2 4.0 32 221-252 158-189 (542)
464 PRK10886 DnaA initiator-associ 21.9 5.2E+02 0.011 22.3 10.7 17 225-241 125-141 (196)
465 TIGR00789 flhB_rel flhB C-term 21.9 93 0.002 22.6 2.5 23 224-246 28-50 (82)
466 cd00984 DnaB_C DnaB helicase C 21.7 1.9E+02 0.004 25.6 5.1 55 187-242 107-169 (242)
467 COG2870 RfaE ADP-heptose synth 21.6 1.6E+02 0.0035 28.5 4.6 46 188-244 134-179 (467)
468 PRK06683 hypothetical protein; 21.3 3.3E+02 0.0071 19.7 5.9 45 190-245 18-62 (82)
469 PF13872 AAA_34: P-loop contai 21.1 69 0.0015 29.7 2.1 24 223-246 159-183 (303)
470 PRK08745 ribulose-phosphate 3- 21.0 5.8E+02 0.013 22.5 13.3 54 187-242 122-177 (223)
471 PRK10927 essential cell divisi 21.0 4.7E+02 0.01 24.5 7.3 45 380-424 261-307 (319)
472 cd01821 Rhamnogalacturan_acety 21.0 4E+02 0.0087 22.5 7.0 52 187-242 95-151 (198)
473 PRK10949 protease 4; Provision 20.8 1.4E+02 0.003 31.1 4.5 48 189-241 354-401 (618)
474 PF13401 AAA_22: AAA domain; P 20.8 1E+02 0.0023 23.9 3.0 25 222-246 73-98 (131)
475 cd06068 H2MP_like-1 Putative [ 20.8 4.5E+02 0.0098 21.1 9.5 48 81-139 18-65 (144)
476 COG0216 PrfA Protein chain rel 20.7 7.3E+02 0.016 23.5 10.0 71 96-168 117-192 (363)
477 KOG0369|consensus 20.6 1.2E+02 0.0027 31.3 3.8 28 223-250 171-198 (1176)
478 PRK10264 hydrogenase 1 maturat 20.5 5.6E+02 0.012 22.1 9.6 47 81-138 24-70 (195)
479 PRK05409 hypothetical protein; 20.5 3.1E+02 0.0066 25.3 6.2 34 211-244 64-97 (281)
480 PF01171 ATP_bind_3: PP-loop f 20.5 2.9E+02 0.0063 23.2 5.8 41 199-245 27-67 (182)
481 COG0742 N6-adenine-specific me 20.3 3.7E+02 0.0081 23.0 6.2 18 30-49 41-58 (187)
482 PF04909 Amidohydro_2: Amidohy 20.2 2.8E+02 0.006 24.7 6.1 51 187-242 86-136 (273)
483 COG0276 HemH Protoheme ferro-l 20.1 7.4E+02 0.016 23.3 10.3 40 187-234 136-175 (320)
484 cd08071 MPN_DUF2466 Mov34/MPN/ 20.1 3.5E+02 0.0076 20.9 5.7 50 189-244 50-102 (113)
No 1
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.9e-79 Score=556.07 Aligned_cols=382 Identities=31% Similarity=0.494 Sum_probs=354.2
Q ss_pred cccccCCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHH
Q psy14484 6 YFKKKSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEK 85 (430)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (430)
.++.|.+.|+++.+++|+ |+||.+|++||||.+|+++++|||+||.+++|+++|++++.+.++ .+.++...++++.
T Consensus 17 ~~~~Y~~~~~~~~~G~G~---~v~D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn-~~~~~~~~~la~~ 92 (404)
T COG4992 17 LMPTYGRLPVVIVRGEGA---YVWDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSN-LFYNEPQAELAEK 92 (404)
T ss_pred hhcccCcCceeEEecccc---EEECCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhccc-ccCChHHHHHHHH
Confidence 367789999999999888 799999999999999999999999999999999999999877654 6788999999999
Q ss_pred HHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeE
Q psy14484 86 LSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYI 165 (430)
Q Consensus 86 l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (430)
|.+..| ..++|+|+|||+|||+.|+|++|.|+. .+.+.+||.+.++|||+|++++++++.+.|++.|.|+.+++.+
T Consensus 93 L~~~s~-~~d~vff~NSGaEA~EaAiKlARk~~~---~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~ 168 (404)
T COG4992 93 LVELSP-FADRVFFCNSGAEANEAALKLARKYTG---DPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRH 168 (404)
T ss_pred HHhhCc-cccEEEEcCCcHHHHHHHHHHHHHHcC---CCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCcee
Confidence 999997 799999999999999999999999873 2358899999999999999999999999999999999999999
Q ss_pred eCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccc
Q psy14484 166 ITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIA 245 (430)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~ 245 (430)
+|+. |+++++++++ +++++||+|| +|+++|.++|+++|+++++++|++||++||+||||
T Consensus 169 vpfn-----------------Di~al~~ai~---~~taAvivEP-IQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQ 227 (404)
T COG4992 169 VPFN-----------------DIEALEAAID---EDTAAVIVEP-IQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQ 227 (404)
T ss_pred cCCC-----------------CHHHHHHHhc---cCeEEEEEec-ccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccc
Confidence 8885 9999999996 5899999999 99999999999999999999999999999999999
Q ss_pred cCCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHH
Q psy14484 246 VGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIF 325 (430)
Q Consensus 246 ~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~ 325 (430)
||+||||++|+++++++.|||++++|+|+|| +|||+++.++.+.+.+.+ ..|++||++||++|+++.++|+++
T Consensus 228 tG~GRTGk~fA~e~~gV~PDI~tlaK~LgGG-~PigA~la~~~~~~~~~~------G~HgSTfGGNpLacAv~~a~l~~l 300 (404)
T COG4992 228 TGLGRTGKLFAYEHYGVEPDILTLAKALGGG-FPIGAMLATEEIASAFTP------GDHGSTFGGNPLACAVALAVLEVL 300 (404)
T ss_pred cCCCccchHHHHHHhCCCCCEEEeeccccCC-ccceeeEEchhhhhcCCC------CcccCCCCcCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 799999999776766665 569999999999999999999999
Q ss_pred hhcCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-CEEEE
Q psy14484 326 NKDNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYL 403 (430)
Q Consensus 326 ~~~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-~~lR~ 403 (430)
.++++.+++++++++|+++|+++ .+++.+..++|+|+|+++++. .+. .+..+.+.|.++|+++.+.+ +++||
T Consensus 301 ~~e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~-~~~-----~a~~~~~~~~~~gvL~~~a~~~ViR~ 374 (404)
T COG4992 301 LEEGLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELK-EPY-----RARDIVRALREEGVLVLPAGPNVIRF 374 (404)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEec-Ccc-----cHHHHHHHHHHCCeEEecCCCCeEEe
Confidence 99999999999999999999999 678888899999999999998 532 14679999999999998765 89999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 404 MPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 404 ~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
.|++.+++|||++++++|++++....
T Consensus 375 ~PpL~i~~eei~~~~~~l~~~l~~~~ 400 (404)
T COG4992 375 LPPLVITEEEIDEALDALERALAAAS 400 (404)
T ss_pred cCCccCCHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999998653
No 2
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=2.2e-76 Score=552.53 Aligned_cols=410 Identities=43% Similarity=0.752 Sum_probs=376.9
Q ss_pred ceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC-C
Q psy14484 14 NLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ-Y 92 (430)
Q Consensus 14 ~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~ 92 (430)
+.++.+++|. |++|.||++|||..|+||++++||++|++.+|+++|+.++.+.+.....+.+..+|+++|++..| .
T Consensus 27 ~~~i~~aeG~---yl~d~~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~Pa~~LA~~L~~~aP~~ 103 (449)
T COG0161 27 PRVIVRAEGV---YLTDIDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGGFTHEPAIELAEKLAELAPEG 103 (449)
T ss_pred ceeeeeccee---EEEeCCCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhhcccCCchHHHHHHHHHHhCCCC
Confidence 7889999887 89999999999999999999999999999999999999999887777888889999999999998 5
Q ss_pred CCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccch-hhhhccCCCeeEeCCCCC
Q psy14484 93 KLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFK-EIYTSLLNKTYIITTPDS 171 (430)
Q Consensus 93 ~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 171 (430)
++++|+|++|||||++.|+|++++|++.+|+|.|.++|+...+|||.+.+++++++.+..+ ..+.++..+..+++.|+.
T Consensus 104 ~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~ 183 (449)
T COG0161 104 GLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYA 183 (449)
T ss_pred CccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcc
Confidence 5999999999999999999999999999999999999999999999999999999965554 677778888889999988
Q ss_pred CCCCC-CCChhHHHHHHHHHHHHHHHhCC-CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCC
Q psy14484 172 RNINK-GNSANEIARCAIFDLEILLKKNH-NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG 249 (430)
Q Consensus 172 ~~~~~-~~~~~~~~~~d~~~le~~l~~~~-~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g 249 (430)
++... +.+..++ ..++++||+.+.++. +++++||+||++++.||+++|++.|+++++++|++|||+||+|||.+|||
T Consensus 184 y~~~~~~~~~~~~-~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFG 262 (449)
T COG0161 184 YRRGFFGEGDEEF-AEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFG 262 (449)
T ss_pred cccCCCCCChHHH-HHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCC
Confidence 76654 5556666 678999999999985 89999999995555599999999999999999999999999999999999
Q ss_pred CcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcC
Q psy14484 250 RTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDN 329 (430)
Q Consensus 250 ~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~ 329 (430)
|+|++|++++++++||++|++|+|+|||+|+|++++++++.+.+..+. ...+.|+.||++||++|++|++.|+++++++
T Consensus 263 RTG~~FA~e~~gi~PDi~~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~-~~~f~HG~TYsghPlacAaAla~L~i~e~e~ 341 (449)
T COG0161 263 RTGKMFACEHAGIVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGD-AGAFMHGHTYSGNPLACAAALANLDILEEED 341 (449)
T ss_pred cCchhhhhhhcCCCCCeeeecccccccchhhHhHhhhHHHHHHHhccc-CCeeccCCccccCHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999998732 7889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHc-hhcCCCeeeEeecceEEEEEEeecCCccch----hHHHHHHHHHHHCCcEEeecCCEEEEe
Q psy14484 330 ILQRISQDMKKITKALTS-LITHPKIINFRQKGMIWAFDVIIEDPEQIE----TFSKKFFVAALKNELLLRPIGNTVYLM 404 (430)
Q Consensus 330 ~~~~~~~~~~~l~~~l~~-l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----~~a~~~~~~l~~~Gv~~~~~~~~lR~~ 404 (430)
+.+++++.+.+|.++|++ +..+|.+.++|+.|++.++++. .+..++. ....++...++++|++++|.++.+.++
T Consensus 342 l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv-~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~g~~i~~~ 420 (449)
T COG0161 342 LLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELV-ADKATKTPFEARVGARVRAAALERGLLIRPLGDVIYLM 420 (449)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEe-cccccccchhhhHHHHHHHHHHHCCeEEeecCCEEEEc
Confidence 999999999999999998 5777999999999999999999 7765553 235678888999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 405 PPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 405 ~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
|++++|++||+++++++++++++..
T Consensus 421 PPliit~~eid~l~~~l~~al~~~~ 445 (449)
T COG0161 421 PPLIITREEIDELVDALREALDETL 445 (449)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998764
No 3
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=100.00 E-value=4.5e-75 Score=547.71 Aligned_cols=398 Identities=33% Similarity=0.525 Sum_probs=358.7
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
..|+++.+++|+ |+||.|||+||||.+++++.++||+||+|++|+++|++++.+........+...+++++|.+.+|
T Consensus 37 ~~p~~~~ra~G~---~l~DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~~~p 113 (447)
T COG0160 37 RFPLVIVRAEGA---YLYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALAP 113 (447)
T ss_pred cCcceEEecccC---EEEeCCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHhCC
Confidence 588999999888 79999999999999999999999999999999999999988765545555899999999999998
Q ss_pred C-CCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc-hhhhhccCCCeeEeCCC
Q psy14484 92 Y-KLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF-KEIYTSLLNKTYIITTP 169 (430)
Q Consensus 92 ~-~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 169 (430)
. ..+.++|++||+|||++|+|+++.++ ++..||.|.++|||+|.+++++++.... +..+.++..++.++|+|
T Consensus 114 ~~~~~~~~f~~sGaeA~E~AiKiAr~~T------gr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp 187 (447)
T COG0160 114 GSGLKKVFFGNSGAEAVEAAIKIARAYT------GRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYP 187 (447)
T ss_pred cccCCeEEecCCcHHHHHHHHHHHHHHh------CCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCC
Confidence 6 57899999999999999999999997 8999999999999999999999887654 45677888889999999
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHhC---CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc
Q psy14484 170 DSRNINKGNSANEIARCAIFDLEILLKKN---HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV 246 (430)
Q Consensus 170 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~ 246 (430)
+.+++++....++.....++.+++.+... +.+++++|+|| +++++|.++||++|+++++++|++||++||+||||+
T Consensus 188 ~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~Ep-IQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQt 266 (447)
T COG0160 188 NPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEP-IQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQT 266 (447)
T ss_pred ccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEec-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 99999876554444444666777756554 56899999999 999999999999999999999999999999999999
Q ss_pred CCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh
Q psy14484 247 GCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN 326 (430)
Q Consensus 247 g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~ 326 (430)
||||||++|+++++++.||++|+||++++| +|+|++++++++++ +.. -.|++||.+||++++++.++|+.++
T Consensus 267 G~GRTG~~fa~E~~gv~PDivt~aK~ig~G-~Pl~avv~r~ei~~-~~~------g~~~~Tf~GNpva~Aaa~AvL~vie 338 (447)
T COG0160 267 GFGRTGKMFAFEHFGVEPDIVTLAKSLGGG-LPLSAVVGRAEIMD-WPP------GGHGGTFGGNPVACAAALAVLDVIE 338 (447)
T ss_pred CCCccccchhhhhcCCCCCEEEecccccCC-CceeEEeccHHhcc-cCC------cccCCCCCcCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998 79999999999988 544 3588999999999999999999999
Q ss_pred hcCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCc---cchhHHHHHHHHHHHCCcEEeecC---C
Q psy14484 327 KDNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPE---QIETFSKKFFVAALKNELLLRPIG---N 399 (430)
Q Consensus 327 ~~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~a~~~~~~l~~~Gv~~~~~~---~ 399 (430)
++++.++..+++++++++|+++ .++|.+.++||.|+|+++++. .+.. .....+..++++++++|+++..+| +
T Consensus 339 ~e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v-~d~~t~~p~~~~~~~i~~~~~~~Glil~~~G~~~n 417 (447)
T COG0160 339 EENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELV-KDRDTKEPDAELAAKIVARAFERGLLLLTCGPHGN 417 (447)
T ss_pred HccHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEe-cCCCCCCCCHHHHHHHHHHHHHcCCEEeccCCCCc
Confidence 9999999999999999999999 789999999999999999998 6533 233457899999999999998876 8
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 400 TVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 400 ~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
++||.|+++++++++|+++++|++++.++
T Consensus 418 viRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 418 VLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred EEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999875
No 4
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.1e-70 Score=536.00 Aligned_cols=412 Identities=53% Similarity=0.956 Sum_probs=366.1
Q ss_pred CceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCC
Q psy14484 13 NNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQY 92 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 92 (430)
.|+++.+++|. |+||.||++||||.+++|+.+|||+||+|.+|++++++++.+.....+.++...+++++|.+..|.
T Consensus 36 ~p~~i~~a~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~ 112 (453)
T PRK06943 36 PLLPVARGEGA---WLYDRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLAGCTHEPAIELAERLAALTGG 112 (453)
T ss_pred CCceEEecccC---EEEeCCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCC
Confidence 47889998887 799999999999999999999999999999999999998766555567888999999999999875
Q ss_pred CCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCC
Q psy14484 93 KLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSR 172 (430)
Q Consensus 93 ~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (430)
..++++|++||+||++.|+|+++.++..+|.++|.+||.+.++|||.+.+++++++...++..|.++..+..++++|+..
T Consensus 113 ~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~ 192 (453)
T PRK06943 113 TLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDAR 192 (453)
T ss_pred CCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCcc
Confidence 56899999999999999999999987777877899999999999999999999999888888888877777788888765
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEcccc-ccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCc
Q psy14484 173 NINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLV-QCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRT 251 (430)
Q Consensus 173 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v-~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~ 251 (430)
+.......+++..+++++++++++++++++++||+|| + ++++|+++|+++|+++|+++|++||++||+|||++||||+
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEP-vvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRt 271 (453)
T PRK06943 193 GARPGETAADVAARALADVRRLFAERAGKIAALIVEP-LVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRT 271 (453)
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEec-cccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCC
Confidence 5554444556667889999999987778999999999 6 9999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHH
Q psy14484 252 GKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNIL 331 (430)
Q Consensus 252 g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~ 331 (430)
|.+|+++++++.||++++||+|+||++|+|++++++++++.+........+.|++||++||++|+++.++|++++++++.
T Consensus 272 G~~fa~~~~gv~PDivt~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~ 351 (453)
T PRK06943 272 GTFFACEQAGVWPDFLCLSKGISGGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAEDDVL 351 (453)
T ss_pred cchhHHHhCCCCCCeEeeehhhccCcccceEEEEcHHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhcCHH
Confidence 99999999999999999999999997799999999999988764211224568999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecCCEEEEeCCCCCCH
Q psy14484 332 QRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNK 411 (430)
Q Consensus 332 ~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~~~lR~~~~~~~t~ 411 (430)
+++++++++|+++|+++..++.+..+++.|+++++++. .+......++..+.+.++++|+++.+.++.+||+|++++|+
T Consensus 352 ~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gvel~-~~~~~~~~~~~~i~~~~~~~Gll~~~~g~~l~~~Ppl~it~ 430 (453)
T PRK06943 352 ARNARKSARLRAALAPLAAHPQVRHLRQRGTIFAFDVA-LDGDAARTFSRRFFEAALERELLLRPIGTTVYLMPPYVLDD 430 (453)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEeEeccccEEEEEEc-cCCCcchHHHHHHHHHHHHCCcEEEecCCEEEEeCCCcCCH
Confidence 99999999999999998667788899999999999997 54322233467889999999999998888999999999999
Q ss_pred HHHHHHHHHHHHHHHHhh
Q psy14484 412 NEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 412 e~i~~~~~~l~~~l~~~~ 429 (430)
+||++++++|+++++++.
T Consensus 431 ~eid~~~~~l~~al~~~~ 448 (453)
T PRK06943 431 DEIAWLAERTRATLDATL 448 (453)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999998763
No 5
>PRK05965 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-69 Score=530.17 Aligned_cols=412 Identities=27% Similarity=0.478 Sum_probs=358.1
Q ss_pred CceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhcccccc-CCCCCHHHHHHHHHHHhhcC
Q psy14484 13 NNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVML-SNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~ 91 (430)
.|+++.+++|. |+||.|||+||||.+++|+.++||+||+|.+|++++++++.+... ..+.++...+++++|.+..|
T Consensus 28 ~~~~i~~a~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p 104 (459)
T PRK05965 28 GVTVLASAKGA---TLTDASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAP 104 (459)
T ss_pred CCceEEeeeEe---EEEECCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCC
Confidence 46899999887 899999999999999999999999999999999999998765432 24678888999999999987
Q ss_pred CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC
Q psy14484 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS 171 (430)
Q Consensus 92 ~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (430)
.+.++++|++||+||++.|+|+++.+++.+|.++|.+||.++++|||.+.+++++++.+.++..+.+.......++.|..
T Consensus 105 ~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~ 184 (459)
T PRK05965 105 GSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYP 184 (459)
T ss_pred CCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcc
Confidence 67789999999999999999999999877887789999999999999999988888877777777766666667777765
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHhC-CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCC
Q psy14484 172 RNINKGNSANEIARCAIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGR 250 (430)
Q Consensus 172 ~~~~~~~~~~~~~~~d~~~le~~l~~~-~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~ 250 (430)
++.+.+.+.++....+++++++.+.++ ++++++||+|| +++++|.++|+++|+++|+++|++||++||+|||++||||
T Consensus 185 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEP-iqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGR 263 (459)
T PRK05965 185 YRNPVGDDPQAIIAASVAALRAKVAELGADNVAAFFCEP-IQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGR 263 (459)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEec-cccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCcc
Confidence 555443444445556788999999765 37899999999 9999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccC-CcccccccCCCCCCHHHHHHHHHHHHHHhhcC
Q psy14484 251 TGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKN-NINIFLHSHSYSGNPLACCAALATLEIFNKDN 329 (430)
Q Consensus 251 ~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~-~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~ 329 (430)
+|.+|+++++++.||++|++|+|+||++|+|++++++++++.+.... ....+.|++||++||++|+++.++|+++++++
T Consensus 264 tG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~ 343 (459)
T PRK05965 264 TGPLFACEAEGVVPDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEGG 343 (459)
T ss_pred CchhhhHhhcCCCCCeEEechhhccCCcceeEEEEcHHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999779999999999998875411 11235689999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccc------hhHHHHHHHHHHHCCcEEeecC-CEEE
Q psy14484 330 ILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQI------ETFSKKFFVAALKNELLLRPIG-NTVY 402 (430)
Q Consensus 330 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~a~~~~~~l~~~Gv~~~~~~-~~lR 402 (430)
+.+++++++++|+++|+++..++.+..+++.|+++++++. .+.... ...+..+.+.++++|+++.+.+ +++|
T Consensus 344 l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~gie~~-~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~g~~~i~ 422 (459)
T PRK05965 344 LLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALELV-ADKATKTPFDAALDPADRIFDRAYANGLVFRAFGDGVLG 422 (459)
T ss_pred HHHHHHHHHHHHHHHHHhhccCCCEEEEeecceEEEEEEe-ccccccCCCCchhHHHHHHHHHHHhCCeEEEecCCcEEE
Confidence 9999999999999999998667888899999999999997 542111 1245778899999999998876 6799
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 403 LMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 403 ~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
+.|++++|++||++++++|++++.++.
T Consensus 423 ~~PpL~it~~ei~~~~~~l~~~l~~~~ 449 (459)
T PRK05965 423 FAPALCCTEGEFDLIFERTRKTLDDVL 449 (459)
T ss_pred EECCCcCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998763
No 6
>PRK07482 hypothetical protein; Provisional
Probab=100.00 E-value=3.4e-69 Score=527.26 Aligned_cols=411 Identities=25% Similarity=0.419 Sum_probs=358.6
Q ss_pred CceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhcccccc-CCCCCHHHHHHHHHHHhhcC
Q psy14484 13 NNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVML-SNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~ 91 (430)
.|+++.+++|+ |+||.|||+||||.+++|+.++||+||+|.+|++++++++.+... ..+.++...+++++|.+..|
T Consensus 32 ~p~~i~~a~G~---~l~D~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~~lAe~L~~~~p 108 (461)
T PRK07482 32 PGRIVEGGEGI---RITDAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVGHGTEASITLSKRIIDRAP 108 (461)
T ss_pred CCeeEEeeeee---EEEECCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCccccccccCCHHHHHHHHHHHHhCC
Confidence 37899999887 899999999999999999999999999999999999998764432 35778999999999999988
Q ss_pred CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC
Q psy14484 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS 171 (430)
Q Consensus 92 ~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (430)
.+.++++|++||+||++.|+|+++.++..+|.++|.+||.+.++|||.+.++.++++.+.++..+.++...+.++++|..
T Consensus 109 ~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~ 188 (461)
T PRK07482 109 AGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHY 188 (461)
T ss_pred CCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCcc
Confidence 66889999999999999999999998877787789999999999999999999999888888888887777777777765
Q ss_pred CCCCC-CCChhHHHHHHHHHHHHHHHhC-CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCC
Q psy14484 172 RNINK-GNSANEIARCAIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG 249 (430)
Q Consensus 172 ~~~~~-~~~~~~~~~~d~~~le~~l~~~-~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g 249 (430)
++.+. +...+.+...+++++++.+.+. ++++++||+|| +++++|.++|+++|+++|+++|++||++||+|||++|||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EP-vqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfG 267 (461)
T PRK07482 189 YRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEP-VLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFG 267 (461)
T ss_pred ccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC-ccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Confidence 55432 2233445566889999988643 57899999999 999999999999999999999999999999999999999
Q ss_pred CcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhcc-CCcccccccCCCCCCHHHHHHHHHHHHHHhhc
Q psy14484 250 RTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYK-NNINIFLHSHSYSGNPLACCAALATLEIFNKD 328 (430)
Q Consensus 250 ~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~-~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~ 328 (430)
|+|.+|+++++++.||++|++|+|+||+.|+|++++++++++.+... .....+.|++||++||++|+++.++|+.++++
T Consensus 268 RtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~ 347 (461)
T PRK07482 268 RLGSMFGSDHYGIEPDLITVAKGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILERE 347 (461)
T ss_pred cCcchhhHHhcCCCCCEEEEccccccCccccceeeecHHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999977999999999998877531 11234568999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCccc------hhHHHHHHHHHHHCCcEEeec--CC
Q psy14484 329 NILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQI------ETFSKKFFVAALKNELLLRPI--GN 399 (430)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~a~~~~~~l~~~Gv~~~~~--~~ 399 (430)
++.+++++++++|+++|+++ ..++.+..+++.|+|+++++. .+.... ...+..+++.|+++|+++.+. ++
T Consensus 348 ~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~-~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~~~~~ 426 (461)
T PRK07482 348 NLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFV-ADRDDRTPFDPALKIGPQVSAAALERGVIARAMPHGD 426 (461)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEec-cCCCcCCCCChhhHHHHHHHHHHHHCCcEEecCCCCC
Confidence 99999999999999999988 678888899999999999997 532211 123467899999999998654 68
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 400 TVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 400 ~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.+||.|++++|++||++++++|+++++++
T Consensus 427 ~i~~~Ppl~it~~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 427 ILGFAPPLVLTRAEADEIVAIAKDAVDEV 455 (461)
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999765
No 7
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=4.9e-69 Score=525.06 Aligned_cols=412 Identities=42% Similarity=0.769 Sum_probs=361.2
Q ss_pred ceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCC-
Q psy14484 14 NLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQY- 92 (430)
Q Consensus 14 ~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~- 92 (430)
+..+.+++|. |+||.||++||||.+++|+.++||+||+|.+|++++++++.+.....+.++...+++++|.+.+|.
T Consensus 47 ~~~i~~a~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~~~~~~~~~~lae~L~~~~p~~ 123 (472)
T PRK08742 47 LVPIARGEGA---WLVGHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLAGFTHEPAVQLAEQLLAIAPRQ 123 (472)
T ss_pred CeeEEecccC---EEEeCCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCc
Confidence 3678888777 899999999999999999999999999999999999988766555567788999999999999873
Q ss_pred ----CCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCC
Q psy14484 93 ----KLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITT 168 (430)
Q Consensus 93 ----~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (430)
+.++++|++||+||++.|+|+++.++..+|.++|.+||.+.++|||.+.+++++++.+.++..|.+...++.++++
T Consensus 124 ~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~ 203 (472)
T PRK08742 124 DGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPS 203 (472)
T ss_pred ccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCC
Confidence 3579999999999999999999999877787789999999999999999999999887788888887777788888
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCC
Q psy14484 169 PDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGC 248 (430)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~ 248 (430)
|+.++...+....+....+++.+++.+.+.++++++||+||++++++|.++|+++|+++|+++|++||++||+|||++||
T Consensus 204 p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGf 283 (472)
T PRK08742 204 PDAYLAEPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGF 283 (472)
T ss_pred CCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCC
Confidence 87666554444445555678999999986667999999999449999999999999999999999999999999999999
Q ss_pred CCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhc
Q psy14484 249 GRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD 328 (430)
Q Consensus 249 g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~ 328 (430)
||+|.+|+++++++.||++++||+|+||++|+|++++++++++.+........+.|++||++||++|+++.++|++++++
T Consensus 284 GRtG~~~a~e~~gv~PDiv~~gKgl~gG~~Plaav~~~~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~ 363 (472)
T PRK08742 284 GRTGTLFACEQAGVMPDLLCLSKGLTGGFLPLSAVLATQQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADD 363 (472)
T ss_pred CCCccchHHHhcCCCCCEEEEcccccCCCCCcceeeccHHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999997799999999999887753111234678999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccc------hhHHHHHHHHHHHCCcEEeecCCEEE
Q psy14484 329 NILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQI------ETFSKKFFVAALKNELLLRPIGNTVY 402 (430)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~a~~~~~~l~~~Gv~~~~~~~~lR 402 (430)
++.++++++++++++.++.+.+++.+.++++.|+++++++. .+.... ...+..+.+.++++|+++.+.++++|
T Consensus 364 ~l~~~~~~~g~~l~~~~~~~~~~~~i~dvRG~Gl~~giel~-~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g~vi~ 442 (472)
T PRK08742 364 DVIARNQPTAARMTQLAAQIGEHPHVADVRQAGMVVAFELT-RGGNKRTPFPPAARVGLHAYRAALARGVVLRPLGDVLY 442 (472)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCeeeEeccceEEEEEec-cCccccccCCchhHHHHHHHHHHHHCCeEEEecCCEEE
Confidence 99999999999999888877678888899999999999997 543211 12346788899999999999889999
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 403 LMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 403 ~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
|.|++++|++||++++++|++++.++.
T Consensus 443 ~~PpL~it~~ei~~~~~~l~~~l~~~~ 469 (472)
T PRK08742 443 WMPPYCVDEAQLALLADTTRHAIDEAV 469 (472)
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998764
No 8
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.1e-68 Score=523.06 Aligned_cols=411 Identities=48% Similarity=0.860 Sum_probs=363.9
Q ss_pred ceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCC
Q psy14484 14 NLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYK 93 (430)
Q Consensus 14 ~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (430)
++++.+++|+ |+||.||++||||.+++|+.++||+||+|.+|++++++++.+.....+.++...+++++|.+..|.+
T Consensus 30 ~~~i~~a~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~ 106 (466)
T PRK07030 30 LIPIRRGEGV---WLEDFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGFSHEPVIELSERLVKITPPG 106 (466)
T ss_pred CceEEeeecc---EEEECCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCC
Confidence 3678888887 8999999999999999999999999999999999999987665555678899999999999998766
Q ss_pred CCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCC
Q psy14484 94 LGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRN 173 (430)
Q Consensus 94 ~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (430)
.++++|++||+||++.|+|+++.+++.+|.+++.+||.+.++|||.+.+++++++.+.++..+.+...+..++|+|+.++
T Consensus 107 ~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~ 186 (466)
T PRK07030 107 LSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYL 186 (466)
T ss_pred cCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccc
Confidence 78999999999999999999999887778778999999999999999999999888777877877777777888887666
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc
Q psy14484 174 INKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK 253 (430)
Q Consensus 174 ~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~ 253 (430)
...+.....+..++++++++.+.++++++++||+||++++++|.++|+++|+++|+++|++||++||+|||++||||+|.
T Consensus 187 ~~~~~~~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~ 266 (466)
T PRK07030 187 RPEGMSWEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGT 266 (466)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcccc
Confidence 55555555667788999999998777899999999944999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhcc-CCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHH
Q psy14484 254 FFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYK-NNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQ 332 (430)
Q Consensus 254 ~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~-~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~ 332 (430)
+|+++++++.||+++++|+|+||++|+|++++++++++.+... .....+.|++||++||++|+++.++|++++++++.+
T Consensus 267 ~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~~ 346 (466)
T PRK07030 267 MFACEQAGIRPDFLCLSKALTGGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDNVIE 346 (466)
T ss_pred chHHHhcCCCCCEEeeehhccCCcccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence 9999999999999999999999977999999999999887531 112346799999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccc------hhHHHHHHHHHHHCCcEEeecCCEEEEeCC
Q psy14484 333 RISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQI------ETFSKKFFVAALKNELLLRPIGNTVYLMPP 406 (430)
Q Consensus 333 ~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~a~~~~~~l~~~Gv~~~~~~~~lR~~~~ 406 (430)
++++++++|+++|+++.+++.+..+++.|+++++++. .+.... ...+..+.+.++++|+++.+.++.+||.|+
T Consensus 347 ~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~-~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~i~~~Pp 425 (466)
T PRK07030 347 NNRALARRMAEATAHLADHPHVAEVRQTGMILAIEMV-QDKASKTPYPWQERRGLKVYQHALERGALLRPLGSVVYFLPP 425 (466)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEeEeceeEEEEEec-cCccccccCcchhHHHHHHHHHHHHCCeEEEecCCEEEEECC
Confidence 9999999999999998667888899999999999996 533211 112357888999999999988889999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHh
Q psy14484 407 YILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 407 ~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+++|++||++++++|+++++++
T Consensus 426 l~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 426 YVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred ccCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999886
No 9
>PRK07678 aminotransferase; Validated
Probab=100.00 E-value=2.6e-68 Score=520.18 Aligned_cols=408 Identities=29% Similarity=0.488 Sum_probs=352.4
Q ss_pred ceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCC
Q psy14484 14 NLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYK 93 (430)
Q Consensus 14 ~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (430)
|+++.+++|+ |+||.|||+||||.+++|+.+|||+||+|.+|++++++++.+... .+.++...+++++|.+.+| .
T Consensus 30 p~~i~~a~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-~~~~~~~~~lae~l~~~~~-~ 104 (451)
T PRK07678 30 TMVVAKAEGA---WVTDIQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPL-TQSHEPAIKLAEKLNEWLG-G 104 (451)
T ss_pred CeeEEeeeee---EEEeCCCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCcccc-ccCCHHHHHHHHHHHHhCC-C
Confidence 7889998887 899999999999999999999999999999999999998765432 4678888999999999987 3
Q ss_pred CCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCC
Q psy14484 94 LGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRN 173 (430)
Q Consensus 94 ~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (430)
.++++|++||+||++.|+|+++.+++.+|.++|.+||.+.++|||++.+++++++.+.++..+.++..++..++.|+.++
T Consensus 105 ~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (451)
T PRK07678 105 EYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYR 184 (451)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCcccc
Confidence 46999999999999999999999987788888999999999999999999999888777777777777777888877666
Q ss_pred CCCCCChhHHHHHHHHHHHHHHH-hCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcc
Q psy14484 174 INKGNSANEIARCAIFDLEILLK-KNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTG 252 (430)
Q Consensus 174 ~~~~~~~~~~~~~d~~~le~~l~-~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g 252 (430)
.+.+...+......++.+++.++ .+++++++||+|| +++++|.++|+++|+++|+++|++||++||+|||++||||+|
T Consensus 185 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EP-iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG 263 (451)
T PRK07678 185 MPGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEP-IITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTG 263 (451)
T ss_pred ccccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEcc-ccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCc
Confidence 54333222233334566788886 3357899999999 999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHH
Q psy14484 253 KFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQ 332 (430)
Q Consensus 253 ~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~ 332 (430)
.+|+++++++.||++|+||+|+||++|+|++++++++++.+........+.|++||++||++|+++.++|+.++++++.+
T Consensus 264 ~~~~~~~~gv~PDivt~gK~lggG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~~~~ 343 (451)
T PRK07678 264 KAFGFMNYGVKPDIITMAKGITSAYLPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENENLIE 343 (451)
T ss_pred hhHHHHhcCCCCCEEEeecccccCCcceeEEEEcHHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhCCHHH
Confidence 99999999999999999999999978999999999999887642212346789999999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCcc----chhHHHHHHHHHHHCCcEEeec-------CCE
Q psy14484 333 RISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQ----IETFSKKFFVAALKNELLLRPI-------GNT 400 (430)
Q Consensus 333 ~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~a~~~~~~l~~~Gv~~~~~-------~~~ 400 (430)
++++++++|+++|+++ .+++.+..+++.|+|+++++. .+... ....+..++..|+++|+++.+. ++.
T Consensus 344 ~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~-~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~ 422 (451)
T PRK07678 344 RSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELV-NDKETKEPADNDKVASVVAACKEKGLIIGKNGDTVAGYNNV 422 (451)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEe-cCCcccCcCchHHHHHHHHHHHHCCcEEeecCccccCCCCE
Confidence 9999999999999776 677888899999999999996 43221 1233578899999999999764 268
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 401 VYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 401 lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+||+|++++|++||++++++|++++.++
T Consensus 423 lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 423 LTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred EEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999764
No 10
>PRK07481 hypothetical protein; Provisional
Probab=100.00 E-value=3.1e-68 Score=519.32 Aligned_cols=411 Identities=31% Similarity=0.532 Sum_probs=357.8
Q ss_pred CceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhcccccc-CCCCCHHHHHHHHHHHhhcC
Q psy14484 13 NNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVML-SNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~ 91 (430)
.|+++.+++|+ |+||.||++||||.+++|+.+|||+||+|.+|++++++++.+... ....++...+++++|.+.+|
T Consensus 24 ~p~~i~~a~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~ 100 (449)
T PRK07481 24 PPIIIVRGDGV---YVYDIDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFA 100 (449)
T ss_pred CCceEEecccc---EEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcC
Confidence 57899999887 899999999999999999999999999999999999998765432 25678999999999999983
Q ss_pred -CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC
Q psy14484 92 -YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD 170 (430)
Q Consensus 92 -~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (430)
.+.++++|++||+||++.|+|+++.+++.+|.++|.+||.+.++|||++.+++++++.+.++..+.+...++.+++.|+
T Consensus 101 ~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~ 180 (449)
T PRK07481 101 PEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPW 180 (449)
T ss_pred CCCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCc
Confidence 3567999999999999999999999988788778999999999999999999999887777777777777787888887
Q ss_pred CCCCCCC-CChhHHHHHHHHHHHHHHH-hCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCC
Q psy14484 171 SRNINKG-NSANEIARCAIFDLEILLK-KNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGC 248 (430)
Q Consensus 171 ~~~~~~~-~~~~~~~~~d~~~le~~l~-~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~ 248 (430)
.++.+++ .+.+.......+.+|+.+. ++++++++||+|| +++++|.++|+++|+++|+++|++||++||+|||++||
T Consensus 181 ~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEP-vqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGf 259 (449)
T PRK07481 181 LYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEP-VQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGF 259 (449)
T ss_pred ccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEec-ccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCc
Confidence 6665554 2344444445677788776 3357899999999 99999999999999999999999999999999999999
Q ss_pred CCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccC-CcccccccCCCCCCHHHHHHHHHHHHHHhh
Q psy14484 249 GRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKN-NINIFLHSHSYSGNPLACCAALATLEIFNK 327 (430)
Q Consensus 249 g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~-~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~ 327 (430)
||+|.+|+++.+++.||++++||+++||++|+|++++++++++.+.... ....+.|++||++||++++++.++|+++++
T Consensus 260 GRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~ 339 (449)
T PRK07481 260 GRTGSWFGSRGWGVKPDIMCLAKGITSGYVPLGATMVNARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVR 339 (449)
T ss_pred CcCchhhHhhhcCCCCCEEEEeecccCCCcCceEEEEcHHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999789999999999998875411 112456899999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCcc------chhHHHHHHHHHHHCCcEEeecCCE
Q psy14484 328 DNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQ------IETFSKKFFVAALKNELLLRPIGNT 400 (430)
Q Consensus 328 ~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~a~~~~~~l~~~Gv~~~~~~~~ 400 (430)
+++.+++++++++|+++|+++ .+++.+..+++.|+|+++++. .+... ....+..+.+.|+++|+++.+.++.
T Consensus 340 ~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g~~ 418 (449)
T PRK07481 340 EDLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLV-ADKATREPIDPSKGYANAVADVARENGVLVRPSGTK 418 (449)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEec-ccccccCCCCchhHHHHHHHHHHHhCCeEEEecCCE
Confidence 999999999999999999998 568888899999999999996 43211 1234567888999999999988888
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 401 VYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 401 lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+||+|++++|++||++++++|++++.++
T Consensus 419 i~l~Ppl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 419 IILSPPLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999875
No 11
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=2.2e-68 Score=521.37 Aligned_cols=414 Identities=39% Similarity=0.727 Sum_probs=364.8
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
..|+++.+++|+ |+||.|||+||||.+++|+.++||+||+|.+|++++++++.+.......++...+++++|.+.+|
T Consensus 37 ~~p~~i~~a~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p 113 (460)
T PRK06916 37 EDPLIIERGEGR---KLYDVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTLLGLANVPSILLAEKLIEVVP 113 (460)
T ss_pred CCCeeEEecccc---EEEeCCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCC
Confidence 358899999888 79999999999999999999999999999999999999876554446778999999999999998
Q ss_pred CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC
Q psy14484 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS 171 (430)
Q Consensus 92 ~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (430)
...++++|++||+||++.|+|+++.+++.+|.++|.+||.+.++|||.+.+++++++.+.++..|.+.......+|+|+.
T Consensus 114 ~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~ 193 (460)
T PRK06916 114 EGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYT 193 (460)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcc
Confidence 66789999999999999999999998877777789999999999999999999999888888888877777778888876
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCc
Q psy14484 172 RNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRT 251 (430)
Q Consensus 172 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~ 251 (430)
++.+.+.+.+.+...+++++++.++++++++++||+||++++++|.++|+++|+++|+++|++||++||+|||++||||+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRt 273 (460)
T PRK06916 194 YRSPYGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRT 273 (460)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcC
Confidence 66554444555666789999999987778999999999339999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccC-CcccccccCCCCCCHHHHHHHHHHHHHHhhcCH
Q psy14484 252 GKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKN-NINIFLHSHSYSGNPLACCAALATLEIFNKDNI 330 (430)
Q Consensus 252 g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~-~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~ 330 (430)
|.+|+++++++.||++++||+|+||++|+|++++++++++.+.... ....+.|++||++||++++++.++|+.++++++
T Consensus 274 G~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l 353 (460)
T PRK06916 274 GKMFACEHENVTPDIMTAGKGLTGGYLPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEKTNL 353 (460)
T ss_pred chhhHHHhcCCCCCeeeeehhhhcCccccceeeecHHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHhccH
Confidence 9999999999999999999999999779999999999988775310 123456889999999999999999999998999
Q ss_pred HHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccc------hhHHHHHHHHHHHCCcEEeecCCEEEEe
Q psy14484 331 LQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQI------ETFSKKFFVAALKNELLLRPIGNTVYLM 404 (430)
Q Consensus 331 ~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~a~~~~~~l~~~Gv~~~~~~~~lR~~ 404 (430)
.++++++++++++.|+++..++.+..+++.|+|+++++. .+.... ...+..+++.|+++|+++.+.++.+||.
T Consensus 354 ~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~giel~-~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~l~~~ 432 (460)
T PRK06916 354 IEQVARKTEYVATQLEDLFALKHVGDIRQLGLMVGIELV-KNKETKEPFEWTERVGVQVCKRSRELGMLTRPLGNTIVFM 432 (460)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEeecCCceeeEEee-cccccccCCCchhhHHHHHHHHHHHCCeEEEecCCEEEEe
Confidence 999999999999999999557888899999999999997 543211 1224678899999999999988999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 405 PPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 405 ~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
|++++|++||++++++|++++.++-
T Consensus 433 Ppl~it~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06916 433 PPLASTIDELDEMLRILYKAISDVT 457 (460)
T ss_pred CCcccCHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999998764
No 12
>PRK07483 hypothetical protein; Provisional
Probab=100.00 E-value=4.1e-68 Score=517.08 Aligned_cols=412 Identities=29% Similarity=0.509 Sum_probs=354.1
Q ss_pred CCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhc
Q psy14484 11 SSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLT 90 (430)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 90 (430)
...|+++.+++|. |+||.||++||||.+++|+.++||+||+|.++++++++++.+.....+.++...+++++|.+..
T Consensus 10 ~~~p~~i~~a~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~ 86 (443)
T PRK07483 10 RATLPVAVAGEGI---YLIDATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTSFFTTEPAEALADRLVAAA 86 (443)
T ss_pred cCCCceEEeceEE---EEEeCCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhC
Confidence 4468999998887 8999999999999999999999999999999999999987544333466888899999999998
Q ss_pred CCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC
Q psy14484 91 QYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD 170 (430)
Q Consensus 91 ~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (430)
|.+.++++|++||+||++.|+|+++.+++.+|.++|.+||.+.++|||++.+++++++.+.++..+.+...+..+++.|.
T Consensus 87 p~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~ 166 (443)
T PRK07483 87 PAGLEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCY 166 (443)
T ss_pred CCCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCc
Confidence 76678999999999999999999999987778778999999999999999999999987777777777766677777665
Q ss_pred CCCCCC-CCChhHHHHHHHHHHHHHHHh-CCCCeEEEEEcccccc-CCCcccCChHHHHHHHHHHHhcCCEEEEeccccC
Q psy14484 171 SRNINK-GNSANEIARCAIFDLEILLKK-NHNKIAAIIIEPLVQC-AGGMIMYDSIYLKLVREICNNYNIHLIADEIAVG 247 (430)
Q Consensus 171 ~~~~~~-~~~~~~~~~~d~~~le~~l~~-~~~~~~~vi~ep~v~~-~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g 247 (430)
.++... ....+++....++++++++.. .++++++||+|| +++ ++|.++|+++|+++|+++|++||++||+|||++|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEP-iqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tG 245 (443)
T PRK07483 167 AYREQRAGESDEAYGQRLADELEAKILELGPDTVAAFVAET-VVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCG 245 (443)
T ss_pred cccccccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeC-cccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeC
Confidence 444421 222333444456788877753 357899999999 998 5899999999999999999999999999999999
Q ss_pred CCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh
Q psy14484 248 CGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK 327 (430)
Q Consensus 248 ~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~ 327 (430)
|||+|.+|+++++++.||++++||+++||+.|+|++++++++++.+.. ....+.|++||++||++++++.++|+++++
T Consensus 246 fGRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~--~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~ 323 (443)
T PRK07483 246 MGRTGTLFACEEDGVAPDLVTIAKGLGAGYQPIGAVLASDRIYDAIAD--GSGFFQHGHTYLGHATACAAALAVQRVIAE 323 (443)
T ss_pred cccCcHHHHHhhcCCCCCeeeehhhhccCccccEEEEEcHHHHHHHhc--CCCccccCCCCCCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999996699999999999888764 123356899999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCcc------chhHHHHHHHHHHHCCcEEeec---
Q psy14484 328 DNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQ------IETFSKKFFVAALKNELLLRPI--- 397 (430)
Q Consensus 328 ~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~a~~~~~~l~~~Gv~~~~~--- 397 (430)
+++.+++++++++|+++|+++ .+++.+..+++.|+|+++++. .+... ....+..+++.++++|+++.+.
T Consensus 324 ~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~ 402 (443)
T PRK07483 324 DGLLANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELV-ADRATKAPFDPALKLHARIKREAMARGLMVYPMGGT 402 (443)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhcCCCeeeEeecccEEEEEEe-ecccccCCCCchhhHHHHHHHHHHHCCcEEEecCcc
Confidence 999999999999999999987 678888899999999999996 43211 1123567899999999999764
Q ss_pred -----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 398 -----GNTVYLMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 398 -----~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
++.+||.|++++|++||++++++|++++.+++
T Consensus 403 ~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~ 439 (443)
T PRK07483 403 IDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAAL 439 (443)
T ss_pred ccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 36899999999999999999999999998865
No 13
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=100.00 E-value=1.1e-67 Score=518.99 Aligned_cols=412 Identities=28% Similarity=0.494 Sum_probs=352.0
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhcccccc-CCCCCHHHHHHHHHHHhhc
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVML-SNLTHKPVIKLSEKLSSLT 90 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~ 90 (430)
+.|.++.+++|+ |+||.|||+||||.+++|+.+|||+||+|.+|++++++++.+... ..+.++...+++++|.+.+
T Consensus 70 ~~p~~i~~~~G~---~l~D~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~ 146 (504)
T PLN02760 70 LEPLVIEKSEGS---YVYDINGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMF 146 (504)
T ss_pred CCCceEEeeeee---EEEECCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHhhc
Confidence 367899999887 899999999999999999999999999999999999998765432 2467888999999999985
Q ss_pred -CCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC
Q psy14484 91 -QYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP 169 (430)
Q Consensus 91 -~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (430)
+.+.++++|++||+|||+.|+|+++.++..+|.+++.+||.++++|||++.+++++++.+.++..+.+....+.++++|
T Consensus 147 ~~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p 226 (504)
T PLN02760 147 TARKMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCP 226 (504)
T ss_pred CCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCC
Confidence 4456789999999999999999999987777877889999999999999999999888776666666555556677777
Q ss_pred CCCCCCC-CCChhHHHHHHHHHHHHHHHh-CCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC
Q psy14484 170 DSRNINK-GNSANEIARCAIFDLEILLKK-NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVG 247 (430)
Q Consensus 170 ~~~~~~~-~~~~~~~~~~d~~~le~~l~~-~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g 247 (430)
+.++... ....+++.....++|++.+.. .++++++||+|| +++++|+++|+++|+++|+++|++||++||+|||+||
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EP-v~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TG 305 (504)
T PLN02760 227 HYWRFHLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEP-VMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICA 305 (504)
T ss_pred cccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECC-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhC
Confidence 6555421 122333333455677777753 356899999999 9999999999999999999999999999999999999
Q ss_pred CCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhcc-CCcccccccCCCCCCHHHHHHHHHHHHHHh
Q psy14484 248 CGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYK-NNINIFLHSHSYSGNPLACCAALATLEIFN 326 (430)
Q Consensus 248 ~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~-~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~ 326 (430)
|||+|.+|+++++++.||++||||+++||++|+|++++++++++.+... +....+.|++||+++|++|+++.++|++++
T Consensus 306 fGRtG~~~a~e~~gv~PDivtlgK~lggG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~ 385 (504)
T PLN02760 306 FGRLGTMFGCDKYNIKPDLVSLAKALSSAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYK 385 (504)
T ss_pred CcccchhhHHHhcCCCCcEEEecccccCCccccceEeecHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999978999999999999887541 112245689999999999999999999999
Q ss_pred hcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccc------hhHHHHHHHHHHHCCcEEeecCCE
Q psy14484 327 KDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQI------ETFSKKFFVAALKNELLLRPIGNT 400 (430)
Q Consensus 327 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~a~~~~~~l~~~Gv~~~~~~~~ 400 (430)
++++.+++++++++|+++|+++.+++.+..++|.|+++++++. ++.... ...+..+++.|+++|+++.+.++.
T Consensus 386 ~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~-~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~ 464 (504)
T PLN02760 386 ERNIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILGTEFV-DNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVAGDN 464 (504)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceEEEEEEe-cCCcccccccchhHHHHHHHHHHHhCCcEEEecCCE
Confidence 8999999999999999999998667888899999999999997 543211 123567889999999999988889
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 401 VYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 401 lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+||+|++++|++||++++++|++++.++
T Consensus 465 lrl~Ppl~it~eeid~~~~~l~~al~~~ 492 (504)
T PLN02760 465 IMMSPPLIITPEEVDELISIYGKALKAT 492 (504)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999876
No 14
>PRK07480 putative aminotransferase; Validated
Probab=100.00 E-value=2.1e-67 Score=513.41 Aligned_cols=409 Identities=28% Similarity=0.474 Sum_probs=351.1
Q ss_pred CceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhcccccc-CCCCCHHHHHHHHHHHhhcC
Q psy14484 13 NNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVML-SNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~ 91 (430)
.|+++.+++|. |+||.||++||||.+++|+.++||+||+|.+|++++++++.+... +.+.++...+++++|.+.+|
T Consensus 32 ~~~~i~~a~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p 108 (456)
T PRK07480 32 GSRVITRAEGV---YLWDSEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEVAP 108 (456)
T ss_pred CCceEEeceee---EEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHHhCC
Confidence 46889998777 899999999999999999999999999999999999998755432 25678999999999999998
Q ss_pred CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC
Q psy14484 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS 171 (430)
Q Consensus 92 ~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (430)
.+.++++|++||+||++.|+|+++.+++.+|.++|.+||.+.++|||.+.+++++++.+.++..+.+.......+++|..
T Consensus 109 ~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~ 188 (456)
T PRK07480 109 PGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYW 188 (456)
T ss_pred CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcc
Confidence 66789999999999999999999999877787789999999999999999999988766555555554556667777766
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHhC-CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCC
Q psy14484 172 RNINKGNSANEIARCAIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGR 250 (430)
Q Consensus 172 ~~~~~~~~~~~~~~~d~~~le~~l~~~-~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~ 250 (430)
++...+.+.+++....++.+++.+.+. ++++++||+|| +++++|.++|+++|+++|+++|++||++||+|||++||||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EP-iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGR 267 (456)
T PRK07480 189 FGEGGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEP-IQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGR 267 (456)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEcc-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCc
Confidence 655443334444443467887666433 57899999999 9999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCH
Q psy14484 251 TGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNI 330 (430)
Q Consensus 251 ~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~ 330 (430)
+|.+|+++++++.||+++|||+++||++|+|++++++++++.+.. ....+.|++||++||++|+++.++|++++++++
T Consensus 268 tG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~--~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l 345 (456)
T PRK07480 268 TGEWFGSQHFGIKPDLMTIAKGLTSGYIPMGAVGVGDRVAEVLIE--EGGEFNHGFTYSGHPVAAAVALANLRILRDEGI 345 (456)
T ss_pred CcchhhhhhcCCCCCeeeeehhhccCCccceEEEEcHHHHHHHhc--CCCCcccCCCCCcCHHHHHHHHHHHHHHHhCCH
Confidence 999999999999999999999999997799999999999888742 123456899999999999999999999998999
Q ss_pred HHHH-HHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccc------hhHHHHHHHHHHHCCcEEeecCCEEEE
Q psy14484 331 LQRI-SQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQI------ETFSKKFFVAALKNELLLRPIGNTVYL 403 (430)
Q Consensus 331 ~~~~-~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~a~~~~~~l~~~Gv~~~~~~~~lR~ 403 (430)
.+++ ++++++|+++|+++.+++.+..+++.|+|+++++. ++.... ......+.+.|+++|+++.+.++.+||
T Consensus 346 ~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG~Glm~gie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~l~~ 424 (456)
T PRK07480 346 VERVRDDTGPYLQKRLRELADHPLVGEVRGVGLVGAIELV-KDKATRERFEAGGGVGTICRDHCFANGLIMRAVGDRMII 424 (456)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeeeEEeecceEEEEEe-ccccccccCcchhhHHHHHHHHHHHCCcEEeecCCEEEE
Confidence 9999 59999999999988667888899999999999996 432211 112356788899999999888889999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 404 MPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 404 ~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+|++.+|++||++++++|++++.++
T Consensus 425 ~Ppl~it~~eid~~~~~l~~al~~~ 449 (456)
T PRK07480 425 SPPLVITHAEIDELVEKARKALDAT 449 (456)
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999876
No 15
>PRK06917 hypothetical protein; Provisional
Probab=100.00 E-value=2.6e-67 Score=512.04 Aligned_cols=410 Identities=30% Similarity=0.479 Sum_probs=355.3
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
+.| ++.+++|+ |+||.||++||||.+++|+.+|||+||+|.+|++++++++.+.....+.++...+++++|.+.+|
T Consensus 13 ~~p-~i~~a~G~---~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p 88 (447)
T PRK06917 13 PYP-VISHGKGV---YLYDQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRSQFTSEPAEKLAKKLSDLSP 88 (447)
T ss_pred CCC-eEEeeeee---EEEeCCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCC
Confidence 345 68888776 89999999999999999999999999999999999999875444345678889999999999998
Q ss_pred CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC
Q psy14484 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS 171 (430)
Q Consensus 92 ~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (430)
...++++|++||+||++.|+|+++.+++.+|.++|.+|+.+.++|||++.+++++++.+.++..|.++......++.|..
T Consensus 89 ~~~~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~ 168 (447)
T PRK06917 89 GDLNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYC 168 (447)
T ss_pred CCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcc
Confidence 56689999999999999999999999877888899999999999999999999888876666666666556666666665
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHhCC-CCeEEEEEccccccC-CCcccCChHHHHHHHHHHHhcCCEEEEeccccCCC
Q psy14484 172 RNINKGNSANEIARCAIFDLEILLKKNH-NKIAAIIIEPLVQCA-GGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG 249 (430)
Q Consensus 172 ~~~~~~~~~~~~~~~d~~~le~~l~~~~-~~~~~vi~ep~v~~~-~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g 249 (430)
++.+.+...+.+..++++.+++.++++. +++++||+|| ++++ +|+++|+++|+++|+++|++||+++|+|||++|||
T Consensus 169 ~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EP-i~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfG 247 (447)
T PRK06917 169 YRCPVQKVYPTCQLACATELETAIERIGAEHIAAFIAEP-IIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLG 247 (447)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEec-cccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcC
Confidence 5555445555666778999999998763 5899999999 8874 77899999999999999999999999999999999
Q ss_pred CcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcC
Q psy14484 250 RTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDN 329 (430)
Q Consensus 250 ~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~ 329 (430)
|+|.+|+++++++.||++++||+++||++|+|++++++++++.+.. ..+.+.+++||++||++++++.++|+.+++++
T Consensus 248 RtG~~~a~~~~gv~PDi~~~gK~l~~G~~Pi~a~~~~~~i~~~~~~--~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~ 325 (447)
T PRK06917 248 RTGAMFAMEHWGVEPDIMTLGKGLGAGYTPIAATVVSDRVMEPILR--GSRSIMSGHTLSANPLSAATALAVLEYMEKHN 325 (447)
T ss_pred cccchhhHHhcCCCCCEEEeeehhccCCcceEEEEEcHHHHHHHhc--cCcccccccCCCCCHHHHHHHHHHHHHHHHCC
Confidence 9999999999999999999999999997799999999999988764 12345688999999999999999999998889
Q ss_pred HHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCcc------chhHHHHHHHHHHHCCcEEeec-----
Q psy14484 330 ILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQ------IETFSKKFFVAALKNELLLRPI----- 397 (430)
Q Consensus 330 ~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~a~~~~~~l~~~Gv~~~~~----- 397 (430)
+.+++++++++|++.|+++ .+++.+..+++.|+|+++++. .+... ....+..+++.|+++|+++.+.
T Consensus 326 l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~ 404 (447)
T PRK06917 326 LPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFV-ADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQD 404 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEe-ccCCcCCCCcchhHHHHHHHHHHHhCCcEEEecccccC
Confidence 9999999999999999999 568888899999999999996 43211 1134578899999999999875
Q ss_pred ---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 398 ---GNTVYLMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 398 ---~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
++.+|++|++++|++||++++++|++++.++.
T Consensus 405 g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 439 (447)
T PRK06917 405 GKEGDAVIIAPPMTITYSELDELLSIFAKSVEEMM 439 (447)
T ss_pred CCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 46999999999999999999999999998763
No 16
>PRK07036 hypothetical protein; Provisional
Probab=100.00 E-value=3.8e-67 Score=512.89 Aligned_cols=411 Identities=27% Similarity=0.468 Sum_probs=355.7
Q ss_pred CceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCC-CCCHHHHHHHHHHHhhcC
Q psy14484 13 NNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSN-LTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~ 91 (430)
.|.++.+++|+ |+||.|||+||||.+++|+.++||+||+|.+|+++++.++.+...+. ..++...+++++|.+..|
T Consensus 33 ~p~~i~~a~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p 109 (466)
T PRK07036 33 GSLVIVEAEGI---YVTDADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPFGDMTNAPAAELAAKLAELAP 109 (466)
T ss_pred CCceEEeCcee---EEEECCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccccccCCHHHHHHHHHHHHhCC
Confidence 47899999887 89999999999999999999999999999999999999876544433 678899999999999988
Q ss_pred CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC
Q psy14484 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS 171 (430)
Q Consensus 92 ~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (430)
.+.++++|++||+||++.|+|+++.++..+|.++|.+||.+.++|||++.+++++++.+.++.+|.+....+.+++.|+.
T Consensus 110 ~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~ 189 (466)
T PRK07036 110 GDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNP 189 (466)
T ss_pred CCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcc
Confidence 66789999999999999999999998777777788999999999999999999998888788777777666777888876
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHh-CCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCC
Q psy14484 172 RNINKGNSANEIARCAIFDLEILLKK-NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGR 250 (430)
Q Consensus 172 ~~~~~~~~~~~~~~~d~~~le~~l~~-~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~ 250 (430)
++.+.+.....+....++.+++.+.. .++++++||+|| +++++|.++|+++|+++|+++|++||+++|+|||++||||
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EP-v~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGR 268 (466)
T PRK07036 190 YRRPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEP-ILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGR 268 (466)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeC-CcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCc
Confidence 65544433334444456677777764 357899999999 9999999999999999999999999999999999999999
Q ss_pred cccccccc-cCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhcc-CCcccccccCCCCCCHHHHHHHHHHHHHHhhc
Q psy14484 251 TGKFFACE-HAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYK-NNINIFLHSHSYSGNPLACCAALATLEIFNKD 328 (430)
Q Consensus 251 ~g~~~~~~-~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~-~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~ 328 (430)
+|++|+++ .+++.||++++||+++||++|+|++++++++++.+... .....+.|++||++||++|+++.++|++++++
T Consensus 269 tG~~~~~~~~~gv~PDivt~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~~ 348 (466)
T PRK07036 269 LGHFFASEAVFGIQPDIITFAKGLTSGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMERE 348 (466)
T ss_pred CchhhhhhhhcCCCCCEEEEccccccCccccEEEEEcHHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHhC
Confidence 99988887 78999999999999999977999999999999887531 01123568899999999999999999999889
Q ss_pred CHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCcc------chhHHHHHHHHHHHCCcEEeecCCEEE
Q psy14484 329 NILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQ------IETFSKKFFVAALKNELLLRPIGNTVY 402 (430)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~a~~~~~~l~~~Gv~~~~~~~~lR 402 (430)
++.+++++++++|+++|+++.+++.+..+++.|+++++++. .+... ....+..+.+.|+++|+++.+.++.+|
T Consensus 349 ~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~~ve~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~ 427 (466)
T PRK07036 349 GLCEHVREVGPYFEERLASLRELPLVGDVRGDHLMACVECV-ADKGSKALLPEDIAIGQRIDRHCQERGLLVRPLEHLCV 427 (466)
T ss_pred CHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeceEEEEEEc-cCccccCCCCchhHHHHHHHHHHHHCCcEEeecCCEEE
Confidence 99999999999999999988667888899999999999997 53221 122456788899999999998888899
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 403 LMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 403 ~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
|+|++++|++||++++++|++++.++
T Consensus 428 l~Ppl~it~~~id~~~~~l~~al~~~ 453 (466)
T PRK07036 428 LSPPLIITRAQIDEIVAILRAAIEET 453 (466)
T ss_pred EeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999865
No 17
>PRK06105 aminotransferase; Provisional
Probab=100.00 E-value=6.5e-67 Score=511.01 Aligned_cols=412 Identities=28% Similarity=0.485 Sum_probs=355.2
Q ss_pred CceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccC-CCCCHHHHHHHHHHHhhcC
Q psy14484 13 NNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLS-NLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~ 91 (430)
.|.++.+++|. |+||.|||+||||.+++|+.++||+||+|.+|++++++++.+.... .+.++...+++++|.+.+|
T Consensus 30 ~p~~~~~a~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p 106 (460)
T PRK06105 30 GPLVIERGEGI---YVYDDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAP 106 (460)
T ss_pred CCceEEeeeEE---EEEECCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCC
Confidence 47889998777 8999999999999999999999999999999999999987644322 4678888999999999998
Q ss_pred CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC
Q psy14484 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS 171 (430)
Q Consensus 92 ~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (430)
.+.++++|++||+||+++|+|+++.+++.+|.++|.+||.+.++|||++.++.++++.+.++..+.+....+.++++|+.
T Consensus 107 ~~~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~ 186 (460)
T PRK06105 107 VPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHY 186 (460)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcc
Confidence 66789999999999999999999988777777789999999999999999999888877677777777677778888865
Q ss_pred CCCCC-CCChhHHHHHHHHHHHHHHHhC-CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCC
Q psy14484 172 RNINK-GNSANEIARCAIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG 249 (430)
Q Consensus 172 ~~~~~-~~~~~~~~~~d~~~le~~l~~~-~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g 249 (430)
++... ....+.+...+++++++.+... ++++++||+|| +++++|.+.|+++|+++|+++|++||+++|+||||+|||
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEP-iqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~G 265 (460)
T PRK06105 187 YRFGLPGESEEAFATRLANELEALILAEGPDTIAAFIGEP-VMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFG 265 (460)
T ss_pred cccccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEcc-ccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCC
Confidence 55422 1222344445677888888543 46899999999 999999999999999999999999999999999999999
Q ss_pred CcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccC-CcccccccCCCCCCHHHHHHHHHHHHHHhhc
Q psy14484 250 RTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKN-NINIFLHSHSYSGNPLACCAALATLEIFNKD 328 (430)
Q Consensus 250 ~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~-~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~ 328 (430)
|+|++|+++++++.||++++||+|+||++|+|++++++++++.+.... ....+.|++|+++||++++++.++|++++++
T Consensus 266 RtG~~f~~~~~~v~PDi~~~gK~lggG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~ 345 (460)
T PRK06105 266 RTGNMFGCETFGIKPDILVMSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEER 345 (460)
T ss_pred cCchhhhHHhcCCCCCeeeeecccccCcccceEEEEcHHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999779999999999988775411 1123558999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccc------hhHHHHHHHHHHHCCcEEeecCCEEE
Q psy14484 329 NILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQI------ETFSKKFFVAALKNELLLRPIGNTVY 402 (430)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~a~~~~~~l~~~Gv~~~~~~~~lR 402 (430)
++.+++++++++|+++|+++.+++.+..+++.|+++++++. .+.... ...+..+.+.++++|+++.+.++.+|
T Consensus 346 ~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~-~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~g~~i~ 424 (460)
T PRK06105 346 DLVGNAAERGARLQARLRALADHPLVGEVRGVGLIAAVELV-ADKATKTPFEPPGKVGARANAAAHEHGVISRAMGDTLA 424 (460)
T ss_pred cHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEe-cCcccCCCCCchhHHHHHHHHHHHHCCeEEEecCCEEE
Confidence 99999999999999999999667888899999999999996 432211 22346788899999999998889999
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 403 LMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 403 ~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
|+|++++|++||++++++|++++.++.
T Consensus 425 l~Ppl~it~~eid~~~~~l~~~l~~~~ 451 (460)
T PRK06105 425 FCPPLIITAAQVDEMVDRFGRALDDVA 451 (460)
T ss_pred EECCCccCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998763
No 18
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=100.00 E-value=1.6e-66 Score=505.74 Aligned_cols=413 Identities=27% Similarity=0.453 Sum_probs=353.6
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
+.|.++.+++|+ |+||.||++||||.+++|+.+|||+||+|.+|++++++++.+.......++...+++++|.+.+|
T Consensus 27 ~~p~~~~~a~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p 103 (442)
T PRK13360 27 KAPRLLVAAKGM---YYTTHDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAFQMGHPKAFELANRIAEIAP 103 (442)
T ss_pred CCCceEEeeeee---EEEeCCCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHHhCC
Confidence 457888998777 89999999999999999999999999999999999999876555445678889999999999987
Q ss_pred CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC
Q psy14484 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS 171 (430)
Q Consensus 92 ~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (430)
.+.++++|++||+||++.|+|+++.+++.+|.++|.+||++.++|||++.+++++++.+.++..|.+....+.++|++..
T Consensus 104 ~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~ 183 (442)
T PRK13360 104 GGLNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLD 183 (442)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCch
Confidence 66789999999999999999999998776766678899999999999999999999887777777766666667776642
Q ss_pred -CCCCCCCChhHHHHHHHHHHHHHHHhC-CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCC
Q psy14484 172 -RNINKGNSANEIARCAIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG 249 (430)
Q Consensus 172 -~~~~~~~~~~~~~~~d~~~le~~l~~~-~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g 249 (430)
++..+..........+++++++.+... ++++++|++|| +++++|.+.|+++|+++|+++|++||++||+||||+|||
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEp-i~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~G 262 (442)
T PRK13360 184 LARNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEP-VAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFG 262 (442)
T ss_pred hhccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEcc-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCC
Confidence 333332222333444678888888755 46899999999 999999999999999999999999999999999999999
Q ss_pred CcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCC-cccccccCCCCCCHHHHHHHHHHHHHHhhc
Q psy14484 250 RTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNN-INIFLHSHSYSGNPLACCAALATLEIFNKD 328 (430)
Q Consensus 250 ~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~-~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~ 328 (430)
|+|.+|+++++++.||+++|||+++||++|+|++++++++++.+..... ...+.+++||+++|++++++.++|++++++
T Consensus 263 rtG~~~a~~~~gv~PDivt~gK~l~gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~ 342 (442)
T PRK13360 263 RLGAPFAAQYFGVTPDLLTCAKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYERE 342 (442)
T ss_pred CCccchhhhhcCCCCceeeeeeccccCccceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999997899999999999887754111 112458899999999999999999999888
Q ss_pred CHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecCCEEEEeCCCC
Q psy14484 329 NILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYI 408 (430)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~~~lR~~~~~~ 408 (430)
++.++++++++++++.|+++..++.+.++++.|+++.+++. .........+..+.+.|+++||++.+.++.+||+|++.
T Consensus 343 ~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~-~~~~~~~~~~~~~~~~l~~~Gvl~~~~~~~lr~~Ppl~ 421 (442)
T PRK13360 343 GLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGAVELA-PRDGKPGKRAYEVFLKCFEKGLMIRYTGDILALSPPLI 421 (442)
T ss_pred CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEEe-cCCCCcchhHHHHHHHHHHCCcEEEecCCEEEEeCCCc
Confidence 99999999999999999988557778889999999999886 43221222346788899999999988888999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHhh
Q psy14484 409 LNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 409 ~t~e~i~~~~~~l~~~l~~~~ 429 (430)
+|++||++++++|++++.+++
T Consensus 422 ~t~~eid~~~~~l~~~l~~~~ 442 (442)
T PRK13360 422 IEEAQIDELFDILAQALKETI 442 (442)
T ss_pred cCHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999998874
No 19
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=100.00 E-value=2.1e-66 Score=505.44 Aligned_cols=412 Identities=27% Similarity=0.476 Sum_probs=354.5
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
+.|.++.+++|+ |+||.||++||||.+++|+.+|||+||+|.++++++++++.+.....+.++...+++++|.+.+|
T Consensus 30 ~~p~~i~~a~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~L~~~~p 106 (445)
T PRK09221 30 AAPRLLVSAEGM---YYTDADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPAFQMGHPLAFELAERLAELAP 106 (445)
T ss_pred CCCceEEecccc---EEEeCCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCC
Confidence 457899999887 89999999999999999999999999999999999999876655545778889999999999987
Q ss_pred CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC-
Q psy14484 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD- 170 (430)
Q Consensus 92 ~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 170 (430)
.+.++|+|++||+||++.|+|+++.+++.+|.+++.+||.+.++|||.+.+++++++.+.++..|.+...+..++++|.
T Consensus 107 ~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (445)
T PRK09221 107 GGLDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLD 186 (445)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCcc
Confidence 5678999999999999999999999987777767889999999999999999999887777777777666677777664
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHhC-CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCC
Q psy14484 171 SRNINKGNSANEIARCAIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG 249 (430)
Q Consensus 171 ~~~~~~~~~~~~~~~~d~~~le~~l~~~-~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g 249 (430)
.++.............+++++++.++.+ .+++++||+|| +++++|.+.|+++|+++|+++|++||++||+||||+|||
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Ep-v~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~G 265 (445)
T PRK09221 187 LPENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEP-MAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFG 265 (445)
T ss_pred ccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEec-ccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCC
Confidence 3333332333333344567888888765 37899999999 999999999999999999999999999999999999999
Q ss_pred CcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccC-CcccccccCCCCCCHHHHHHHHHHHHHHhhc
Q psy14484 250 RTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKN-NINIFLHSHSYSGNPLACCAALATLEIFNKD 328 (430)
Q Consensus 250 ~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~-~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~ 328 (430)
|+|.+|+++++++.||++++||+++||++|+|++++++++++.+.... ....+.|++||+++|++++++.++|++++++
T Consensus 266 RtG~~~~~~~~gv~PDi~~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~~ 345 (445)
T PRK09221 266 RLGAAFAAERFGVTPDIITFAKGLTNGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREE 345 (445)
T ss_pred cCchhhHHHhcCCCCCEEEeccccccCcccceeeEEcHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999889999999999988775410 0113458899999999999999999999888
Q ss_pred CHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecCCEEEEeCCCC
Q psy14484 329 NILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYI 408 (430)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~~~lR~~~~~~ 408 (430)
++.+++++++++|+++|+++..++.+..+++.|++.++++. .........+..+.+.|+++|+++.+.++.+||+|+++
T Consensus 346 ~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~-~~~~~~~~~~~~~~~~~~~~Gv~~~~~~~~lr~~Ppl~ 424 (445)
T PRK09221 346 DLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIELA-PRPGAPGARGYEAFMKCFEKGLLVRYTGDTIALSPPLI 424 (445)
T ss_pred cHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEEEEEe-cccccccchHHHHHHHHHHCCeEEeecCCEEEEECCcc
Confidence 99999999999999999988667778899999999999987 42211111245788999999999988889999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHh
Q psy14484 409 LNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 409 ~t~e~i~~~~~~l~~~l~~~ 428 (430)
+|++||++++++|++++.++
T Consensus 425 ~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 425 IEKAQIDELVDALGDALRAV 444 (445)
T ss_pred CCHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999875
No 20
>PRK12403 putative aminotransferase; Provisional
Probab=100.00 E-value=2.9e-66 Score=506.45 Aligned_cols=408 Identities=27% Similarity=0.442 Sum_probs=348.6
Q ss_pred CceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhcccccc-CCCCCHHHHHHHHHHHhhcC
Q psy14484 13 NNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVML-SNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~ 91 (430)
.|.++.+++|+ |+||.|||+||||.+++++.+|||+||+|++|++++++++.+... ....++...+++++|++.+|
T Consensus 36 ~p~~i~~a~G~---~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p 112 (460)
T PRK12403 36 GPRVMVRGEGL---HLWDNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLP 112 (460)
T ss_pred CCceEEeceee---EEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCC
Confidence 47899999887 899999999999999999999999999999999999998765433 24567889999999999997
Q ss_pred CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC
Q psy14484 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS 171 (430)
Q Consensus 92 ~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (430)
...++++|++||+|||+.|+|+++.++..+|++++.+|+.+..+|||++.+++++++.+.++. +.+...++.+++.|..
T Consensus 113 ~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~-~~~~~~~~~~~~~p~~ 191 (460)
T PRK12403 113 GHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHE-MGGLIPDVAHIDEPYW 191 (460)
T ss_pred CCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccc-cCCCCCCCEEeCCCcc
Confidence 567899999999999999999999987777766678899999999999999999988665544 3455566677777766
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHh-CCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCC
Q psy14484 172 RNINKGNSANEIARCAIFDLEILLKK-NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGR 250 (430)
Q Consensus 172 ~~~~~~~~~~~~~~~d~~~le~~l~~-~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~ 250 (430)
++.+.+....++...+++++++.+.+ .++++++||+|| +++++|.+.|+++|+++|+++|++||++||+|||++||||
T Consensus 192 ~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Ep-v~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGR 270 (460)
T PRK12403 192 YANGGELTPAEFGRRAALQLEEKILELGAENVAGFVAEP-FQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGR 270 (460)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEcc-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence 55443333344544456778776643 346899999999 9999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCH
Q psy14484 251 TGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNI 330 (430)
Q Consensus 251 ~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~ 330 (430)
+|.+|+++++++.||++++||+|+||++|+|++++++++++.+.. ..+.+.|++||++||++|+++.++|++++++++
T Consensus 271 tG~~~a~e~~gv~PDiv~~gK~lggG~~Piga~v~~~~i~~~~~~--~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~l 348 (460)
T PRK12403 271 TGEWFAHEHFGFEPDTLSIAKGLTSGYVPMGGLVLSKRIAEALVE--QGGVFAHGLTYSGHPVAAAVAIANLKALRDEGV 348 (460)
T ss_pred CchhhhhhhcCCCCCeEEEcccccccccceEEEEECHHHHHHHhc--CCCccccCCCCCCCHHHHHHHHHHHHHHHhccH
Confidence 999999999999999999999999997799999999999888764 123456899999999999999999999998889
Q ss_pred HHHHH-HHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCccc------hhHHHHHHHHHHHCCcEEeecCCEEE
Q psy14484 331 LQRIS-QDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQI------ETFSKKFFVAALKNELLLRPIGNTVY 402 (430)
Q Consensus 331 ~~~~~-~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~a~~~~~~l~~~Gv~~~~~~~~lR 402 (430)
.++++ +++++|++.|+++ .+++.+.++++.|+++++++. .+.... ......+.+.++++|+++.+.++.+|
T Consensus 349 ~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~ 427 (460)
T PRK12403 349 VTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFA-EDKATRKRFANENDLAWRCRTIGFEEGVIIRSTLGRMI 427 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEc-cCccccccccchhHHHHHHHHHHHhCCEEEEecCCEEE
Confidence 99996 9999999999888 678888999999999999996 432211 11234566778999999988778899
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 403 LMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 403 ~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
|+|++++|++|+++++++|++++.++
T Consensus 428 l~Ppl~it~~eid~~~~~l~~al~~~ 453 (460)
T PRK12403 428 MAPALVAGRAEIDELVDKTRIAVDRT 453 (460)
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999876
No 21
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-66 Score=506.02 Aligned_cols=399 Identities=25% Similarity=0.366 Sum_probs=343.9
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
+.|+++.+++|+ |+||.|||+||||.+++|+.++||+||+|.+|+++++++........+.++...+++++|.+..|
T Consensus 44 ~~p~~i~~a~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p 120 (464)
T PRK06938 44 RIPLALKRARGI---YVEDVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTLDLTTPVKDQFVQDLFASLP 120 (464)
T ss_pred CCCceEEecccc---EEEeCCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhcccccccCCHHHHHHHHHHHHhCc
Confidence 468899999888 79999999999999999999999999999999999997543222235678888999999999887
Q ss_pred CCC---CeEEEc-CCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeC
Q psy14484 92 YKL---GHCFYG-SDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIIT 167 (430)
Q Consensus 92 ~~~---~~v~~~-~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (430)
... ++++|+ +||+||++.|+|+++.++ +|.+||.+.++|||++.+++++++...++..+.+...++.+++
T Consensus 121 ~~~~~~~~v~f~~~SGSEAve~AlklAr~~t------gr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~ 194 (464)
T PRK06938 121 EAFAREAKIQFCGPTGTDAVEAALKLVKTAT------GRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLP 194 (464)
T ss_pred ccccccceEEEeCCCcHHHHHHHHHHHHHhh------CCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeC
Confidence 443 367665 799999999999999885 8899999999999999999998887767777776666677888
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHhCC---CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecc
Q psy14484 168 TPDSRNINKGNSANEIARCAIFDLEILLKKNH---NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEI 244 (430)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~---~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv 244 (430)
+|+.++.+++...++....+++.+++.+.+.. +++++||+|| +++++|.++|+++|+++|+++|++||++||+|||
T Consensus 195 ~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EP-iqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV 273 (464)
T PRK06938 195 YPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEV-VQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEI 273 (464)
T ss_pred CCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEcc-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 88776665544444444567899999997532 4799999999 9999999999999999999999999999999999
Q ss_pred ccCCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHH
Q psy14484 245 AVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEI 324 (430)
Q Consensus 245 ~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~ 324 (430)
++||||+|.+|+++++++.||++|+||+++|| +|+|++++++++ +.+.. ..|++||++||++|+++.++|++
T Consensus 274 ~tGfGRtG~~~a~e~~gv~PDiv~~gKglggG-~PlsAv~~~~~~-~~~~~------~~~~~T~~gnpla~Aaa~a~L~~ 345 (464)
T PRK06938 274 QSGFGRTGKMFAFEHAGIIPDVVVLSKAIGGS-LPLAVVVYREWL-DTWQP------GAHAGTFRGNQMAMAAGSATLRY 345 (464)
T ss_pred ccCCCcCcHHHHHHhcCCCCCEEEeeccccCC-CceEEEeehhHh-hccCC------CCCCCCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 799999999885 54432 34889999999999999999999
Q ss_pred HhhcCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCcc---------chhHHHHHHHHHHHCCcEE
Q psy14484 325 FNKDNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQ---------IETFSKKFFVAALKNELLL 394 (430)
Q Consensus 325 ~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~---------~~~~a~~~~~~l~~~Gv~~ 394 (430)
++++++.+++++++++|+++|+++ .+++.+..++|.|+|+++++. ++... ....+..+++.|+++|+++
T Consensus 346 l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~ 424 (464)
T PRK06938 346 IKEHRLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIV-DPQGEPDALGHPPANGELASLIQRECLRRGLIL 424 (464)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEec-cCcccccccccCCccHHHHHHHHHHHHHCCeEE
Confidence 998999999999999999999998 678888999999999999996 43211 1234567889999999999
Q ss_pred eec---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 395 RPI---GNTVYLMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 395 ~~~---~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
.+. ++++||.|++++|++|+++++++|++++.++.
T Consensus 425 ~~~g~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~~ 462 (464)
T PRK06938 425 ELGGRHGSVVRFLPPLIITAEQIDEVAEIFAEAVAAAV 462 (464)
T ss_pred eecCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHHHh
Confidence 874 47999999999999999999999999998764
No 22
>PRK06062 hypothetical protein; Provisional
Probab=100.00 E-value=4.9e-66 Score=503.60 Aligned_cols=400 Identities=27% Similarity=0.386 Sum_probs=343.3
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
..|+++.+++|. |+||.||++||||.+++|+.+|||+||+|.+|++++++++.+... .+.++...+++++|.++.|
T Consensus 34 ~~p~~i~~a~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~-~~~~~~~~~lae~L~~~~p 109 (451)
T PRK06062 34 INPMVIAGAEGS---YVWDYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAP-AHANDARSEAARLIAERAP 109 (451)
T ss_pred CCCceEEeceee---EEEECCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCC-ccCCHHHHHHHHHHHHhCC
Confidence 357889998887 899999999999999999999999999999999999998765543 6778999999999999998
Q ss_pred CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC
Q psy14484 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS 171 (430)
Q Consensus 92 ~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (430)
.+.++++|++||+||++.|+|+++.++ +|.+||.+.++|||++.+++++++.+.++. ..+...++..++.|+.
T Consensus 110 ~~~~~v~f~~SGsEAve~AlklAr~~t------gr~~ii~~~~~yHG~t~~als~~~~~~~~~-~~~~~~~~~~~~~p~~ 182 (451)
T PRK06062 110 GDLSKVFFTNGGADANEHAVRMARLHT------GRPKVLSAYRSYHGGTGSAINLTGDPRRWP-NDTGRAGVVHFFGPFL 182 (451)
T ss_pred CCCCEEEEcCChHHHHHHHHHHHHHhh------CCceEEEEeCCCCCCCHHHHhhcCCccccc-CCCCCCCCEEeCCCCc
Confidence 667899999999999999999999986 889999999999999999998887554332 2344455566666665
Q ss_pred CCCCCCC-ChhHHHHHHHHHHHHHHHhC-CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCC
Q psy14484 172 RNINKGN-SANEIARCAIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG 249 (430)
Q Consensus 172 ~~~~~~~-~~~~~~~~d~~~le~~l~~~-~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g 249 (430)
++.++.. ..++....+++.++++++.. ++++++||+|| +++++|.+.|+++|+++|+++|++||++||+|||++|||
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEP-v~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfG 261 (451)
T PRK06062 183 YRSEFHATTEEEECERALAHLERVIELEGPSTIAAILLES-VPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFG 261 (451)
T ss_pred cccccCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEcc-ccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCC
Confidence 5543321 11233344688999999754 46899999999 999999999999999999999999999999999999999
Q ss_pred CcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcC
Q psy14484 250 RTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDN 329 (430)
Q Consensus 250 ~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~ 329 (430)
|+|.+|+++++++.||+++|||+|+||++|+|++++++++++.+.. ..+.+++||++||++|+++.++|+.+++++
T Consensus 262 RtG~~~a~~~~gv~PDi~t~gK~lggG~~Pigav~~~~~i~~~~~~----~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~ 337 (451)
T PRK06062 262 RTGKWFAIEHFGVVPDLITFAKGVNSGYVPLGGVAISEAIAATFAD----RPYPGGLTYSGHPLACAAAVATINAMEEEG 337 (451)
T ss_pred cCcHHHHHHhcCCCCCeeeechhhhcCCcCcEEEEEcHHHHHHhcc----CCCCCCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999997799999999999988753 235688999999999999999999999889
Q ss_pred HHHHHHHHH-HHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCccc---------hhHHHHHHHHHHHCCcEEeecC
Q psy14484 330 ILQRISQDM-KKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQI---------ETFSKKFFVAALKNELLLRPIG 398 (430)
Q Consensus 330 ~~~~~~~~~-~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~~---------~~~a~~~~~~l~~~Gv~~~~~~ 398 (430)
+.+++++++ ++++++|+++ ..++.+..+++.|+|+++++. .+.... ...+..+++.|+++||++.+.+
T Consensus 338 l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~~gve~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~~~ 416 (451)
T PRK06062 338 IVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFWALELV-ADRETREPLAPYGASSAAMAAVKAACKERGLLPFVNG 416 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccccEEEEEEc-ccccccCCCcccchhhHHHHHHHHHHHHCCcEEeecC
Confidence 999999998 6999999998 667888899999999999986 432110 1135688999999999998878
Q ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 399 NTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 399 ~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+.+||+|++.+|++||++++++|++++.++
T Consensus 417 ~~lrl~ppl~~t~~eid~~~~~l~~~l~~~ 446 (451)
T PRK06062 417 NRIHVVPPCTVTEDEVREGLAILDAALAVA 446 (451)
T ss_pred CEEEEECCccCCHHHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999999865
No 23
>PRK06541 hypothetical protein; Provisional
Probab=100.00 E-value=9.2e-66 Score=502.32 Aligned_cols=408 Identities=29% Similarity=0.515 Sum_probs=355.4
Q ss_pred ceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCC
Q psy14484 14 NLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYK 93 (430)
Q Consensus 14 ~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (430)
|.++.+++|+ |+||.||++||||.+++|+.+|||+||+|.+|++++++++.+.....+.++...+++++|.+..|.+
T Consensus 35 ~~~i~~a~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~ 111 (460)
T PRK06541 35 VPVIVRGEGC---YIWDDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPLWSYAHPPAIELAERLAALAPGD 111 (460)
T ss_pred CceEEeCccc---EEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCC
Confidence 6788998887 8999999999999999999999999999999999999987665445678899999999999998766
Q ss_pred CCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCC
Q psy14484 94 LGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRN 173 (430)
Q Consensus 94 ~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (430)
.++++|++||+||++.|+|+++.+++.+|.+++.+||.+.++|||.+.+++++++.+.++..+.+...++..++.|+.++
T Consensus 112 ~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 191 (460)
T PRK06541 112 LNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYR 191 (460)
T ss_pred cCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCcccc
Confidence 78999999999999999999999887778778999999999999999999999887777777777777888888887665
Q ss_pred CC-CCCChhHHHHHHHHHHHHHHHhC-CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCc
Q psy14484 174 IN-KGNSANEIARCAIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRT 251 (430)
Q Consensus 174 ~~-~~~~~~~~~~~d~~~le~~l~~~-~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~ 251 (430)
.+ ++.+.+.+...+++.+++.+++. ++++++|++|| +++++|.+.|+++|+++|+++|++||++||+||||+||||+
T Consensus 192 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EP-v~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~ 270 (460)
T PRK06541 192 APELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEP-VQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRL 270 (460)
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcC
Confidence 54 33334445555688899998753 56899999999 99999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHH
Q psy14484 252 GKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNIL 331 (430)
Q Consensus 252 g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~ 331 (430)
|.+|+++++++.||++++||+++||++|+|++++++++++.+.. . .+.+.+++|+++||++++++.++|+.++++++.
T Consensus 271 G~~~a~~~~gv~PDivt~gK~l~~G~~pigav~~~~~i~~~~~~-~-~~~~~~~~T~~gnp~~~aaala~l~~l~~~~~~ 348 (460)
T PRK06541 271 GEMFGCERFGYVPDIITCAKGITSGYSPLGAMIASDRLFEPFLD-G-PTMFLHGYTFGGHPVSAAVALANLDIFEREGLL 348 (460)
T ss_pred chhhhhhhcCCCCCEEEecccccCCccceeEEEEcHHHHHHhhc-C-CCccccCCCCCCCHHHHHHHHHHHHHHHhccHH
Confidence 99999999999999999999999996699999999999888764 1 145668899999999999999999999888999
Q ss_pred HHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccc--------hh-HHHHHHHHHHHCCcEEeec--C-C
Q psy14484 332 QRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQI--------ET-FSKKFFVAALKNELLLRPI--G-N 399 (430)
Q Consensus 332 ~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~--------~~-~a~~~~~~l~~~Gv~~~~~--~-~ 399 (430)
+++++++++|+++|+++..++.+..+++.|+|+++++. .+.... .. ....+++.|+++|+++.+. + +
T Consensus 349 ~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~g~~ 427 (460)
T PRK06541 349 DHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELV-KDKATKETFTDDESERLLRGFLSPALFEAGLYCRADDRGDP 427 (460)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEe-cCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEecCCCCC
Confidence 99999999999999998557777889999999999996 532111 00 1236788899999999873 3 6
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 400 TVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 400 ~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.+||+|++.+|++||++++++|++++.++
T Consensus 428 ~lrl~Ppl~~t~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06541 428 VVQLAPPLISGQEEFDEIEQILRSVLTEA 456 (460)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999865
No 24
>KOG1404|consensus
Probab=100.00 E-value=5.8e-67 Score=466.74 Aligned_cols=394 Identities=29% Similarity=0.420 Sum_probs=350.6
Q ss_pred cCCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhh
Q psy14484 10 KSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSL 89 (430)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 89 (430)
+...|+++.++++. |++|++|++|||+.+|+++..+||+||+|.+++.+|+..+.|.. ..+.+++..++++.|.+.
T Consensus 29 ~~~~Pl~Iv~~~~~---ylyDe~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t-~~~~~~pi~~~Ae~L~s~ 104 (442)
T KOG1404|consen 29 YYKKPLVIVRGEGQ---YLYDEEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTT-SGYLNPPIHDLAEALVSK 104 (442)
T ss_pred cccCCceEEecceE---EEEcCCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEee-ccccCCcHHHHHHHHHHh
Confidence 46689999999887 89999999999999999999999999999999999997766543 367888899999999999
Q ss_pred cCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC
Q psy14484 90 TQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP 169 (430)
Q Consensus 90 ~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (430)
+|.++..++|+|||+|||++|+++++.|+ +...+|.+..+|||.+..++++++.+.++.++........+...|
T Consensus 105 ~P~~l~~vfF~nsGsEANelal~mar~Yt------~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~P 178 (442)
T KOG1404|consen 105 LPGDLKVVFFVNSGSEANELALKMARLYT------GNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNP 178 (442)
T ss_pred CCCCceEEEEecCCchHHHHHHHHHHHhc------CCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCC
Confidence 99899999999999999999999999997 888999999999999999999999888888777666677888889
Q ss_pred CCCCCCCCCCh-hHHHHHHHHHHHHHHHhC-CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC
Q psy14484 170 DSRNINKGNSA-NEIARCAIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVG 247 (430)
Q Consensus 170 ~~~~~~~~~~~-~~~~~~d~~~le~~l~~~-~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g 247 (430)
+.++.+++.+. .+......+++++.+..- ++.++++|+|+ +++-+|++.+++.||+++.++|+++|.++|.||||+|
T Consensus 179 dp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEt-IqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtG 257 (442)
T KOG1404|consen 179 DPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAET-IQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTG 257 (442)
T ss_pred CcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeeh-hccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhc
Confidence 99988875553 333444566777666654 67899999999 9999999999999999999999999999999999999
Q ss_pred CCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh
Q psy14484 248 CGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK 327 (430)
Q Consensus 248 ~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~ 327 (430)
|||+|.+|+++..++.|||+|++|++|+| .|+|+++.++++++.+.+. ..+..||++||++++++.++|+++++
T Consensus 258 fGRtG~~wgfe~h~v~PDIvTmAKgiGnG-~Pl~AVvtt~EIa~v~~~~-----~~~fnTyggnP~a~avg~aVL~Vike 331 (442)
T KOG1404|consen 258 FGRTGHMWGFESHGVVPDIVTMAKGIGNG-FPLGAVVTTPEIADVLNQK-----SSHFNTYGGNPVACAVGLAVLKVIKE 331 (442)
T ss_pred cccccccccccccCCCccHHHHHhhccCC-CcceeeecCHHHHHHHHhc-----cccccccCCCchhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 7999999999999988861 12789999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCccch----hHHHHHHHHHHHCCcEEeec---CC
Q psy14484 328 DNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIE----TFSKKFFVAALKNELLLRPI---GN 399 (430)
Q Consensus 328 ~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----~~a~~~~~~l~~~Gv~~~~~---~~ 399 (430)
+++.++..+.+.+|+++|.++ .++|.+.++||+|+|+++++. +++..+. .....+.+.++++|+++..+ |+
T Consensus 332 e~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V-~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G~ 410 (442)
T KOG1404|consen 332 ENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELV-SDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHGN 410 (442)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEe-cccCCCCCcchHHHHHHHHHHHHhCeeeecccccce
Confidence 999999999999999999999 789999999999999999999 7662211 12357888999999999765 47
Q ss_pred EEEEeCCCCCCHHHHHHHHHHH
Q psy14484 400 TVYLMPPYILNKNEIQHMTSAI 421 (430)
Q Consensus 400 ~lR~~~~~~~t~e~i~~~~~~l 421 (430)
.+|++|++++|++|++.+++.+
T Consensus 411 vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 411 VFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred EEEecCCeeccHHHHHHHHHHH
Confidence 9999999999999997777655
No 25
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=6.1e-66 Score=499.24 Aligned_cols=398 Identities=33% Similarity=0.611 Sum_probs=348.4
Q ss_pred eeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCC
Q psy14484 15 LVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKL 94 (430)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 94 (430)
.++.+++|. |+||.||++||||.+++|+.++||+||+|.+|++++++++.+.....+.++...+++++|.+.+|.+.
T Consensus 28 ~~i~~a~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 104 (429)
T PRK06173 28 YPVERADGV---MITLKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMFGGFTHEPAVELAQKLLEILPPSL 104 (429)
T ss_pred ceEEeceee---EEEcCCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCc
Confidence 467888776 89999999999999999999999999999999999999876554445678999999999999987678
Q ss_pred CeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCC-ccchhhhhccCCCeeEeCCCCCCC
Q psy14484 95 GHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNI-QSFKEIYTSLLNKTYIITTPDSRN 173 (430)
Q Consensus 95 ~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 173 (430)
++++|++||+||++.|+|+++.++..+|+++|.+||.+.++|||.+.+++++++. +.++..+.+......++++|....
T Consensus 105 ~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 184 (429)
T PRK06173 105 NKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKF 184 (429)
T ss_pred CEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCccc
Confidence 8999999999999999999999987788788999999999999999888888764 446666666655666777664321
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEcccc-ccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcc
Q psy14484 174 INKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLV-QCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTG 252 (430)
Q Consensus 174 ~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v-~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g 252 (430)
...+...+++.|++.+.++++++++||+|| + ++++|.++|+++|+++|+++|++||++||+||+|+||||+|
T Consensus 185 ------~~~~~~~~l~~l~~~i~~~~~~iAAvi~EP-i~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG 257 (429)
T PRK06173 185 ------GEEWNDEAIEPLQDLLEQKGDEIAALILEP-VVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTG 257 (429)
T ss_pred ------chhHHHHHHHHHHHHHHhCCCcEEEEEEcc-hhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCC
Confidence 123445578999999986667899999999 7 99999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHH
Q psy14484 253 KFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQ 332 (430)
Q Consensus 253 ~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~ 332 (430)
.+|+++++++.||+++|||+++||++|++++++++++++.+.. +..+.+.|++||.++|++++++.++|++++++++.+
T Consensus 258 ~~~a~~~~gv~PDiv~~gK~l~gG~~p~~a~~~~~~i~~~~~~-~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~~~~~ 336 (429)
T PRK06173 258 KLFALEHAGVVPDIMCIGKALTGGYLTLSATITTEAIAQTICS-GEAKCFMHGPTFMANPLACAIAAESIRLLLESPWQQ 336 (429)
T ss_pred cchHHHhcCCCCCEEEeehhhhCCccccceEEecHHHHHHHhc-CCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHH
Confidence 9999999999999999999999997899999999999888754 233456789999999999999999999998889999
Q ss_pred HHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecCCEEEEeCCCCCCHH
Q psy14484 333 RISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKN 412 (430)
Q Consensus 333 ~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~~~lR~~~~~~~t~e 412 (430)
++++++++|+++|+++..++.+..+++.|+++.+++. +... +..+.+.|+++|+++.+.++++||.|+++++++
T Consensus 337 ~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~-~~~~-----~~~i~~~l~e~Gi~v~~~g~~l~~~Ppl~it~~ 410 (429)
T PRK06173 337 NIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMK-EPVN-----MATLQPRFVEHGIWVRPFGKLVYIMPPFIISPD 410 (429)
T ss_pred HHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeC-Cccc-----HHHHHHHHHHCCeEEEecCCEEEEeCCccCCHH
Confidence 9999999999999877556777789999999999997 5311 357889999999999998899999999999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q psy14484 413 EIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 413 ~i~~~~~~l~~~l~~~~ 429 (430)
|+++++++|++++.++-
T Consensus 411 ei~~~~~~l~~~l~~~~ 427 (429)
T PRK06173 411 ELSQLTSGLLRVLKQEY 427 (429)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999998764
No 26
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=6.9e-66 Score=501.86 Aligned_cols=382 Identities=30% Similarity=0.540 Sum_probs=338.7
Q ss_pred CCceeEEeecC-CceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhc
Q psy14484 12 SNNLVIRSLKN-SWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLT 90 (430)
Q Consensus 12 ~~~~~~~~~~~-~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 90 (430)
+.+.++.+++| . |+||.||++||||.+|+|+.++||+||+|.+|++++++++.+... .+.++...+++++|.+..
T Consensus 62 ~~~~~~~~~~G~~---~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~~-~~~~~~~~~lae~L~~~~ 137 (459)
T PRK11522 62 DYGAVEWQAGGLN---TLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQ-ELLDPLRAMLAKTLAALT 137 (459)
T ss_pred CCCeeEEeccCeE---EEEECCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCccccc-ccCCHHHHHHHHHHHHhC
Confidence 45678999988 7 899999999999999999999999999999999999998765432 466888999999999998
Q ss_pred CCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC
Q psy14484 91 QYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD 170 (430)
Q Consensus 91 ~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (430)
|.+.++++|++||+||++.|+|+++.++..+ +|.+||.+.++|||++.+++++++.+.++.++.+..+.+.+++++
T Consensus 138 p~~~~~v~f~~SGsEAve~AlklAr~~t~~~---gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~- 213 (459)
T PRK11522 138 PGKLKYSFFCNSGTESVEAALKLAKAYQSPR---GKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFG- 213 (459)
T ss_pred CCCCCEEEEeCCchHHHHHHHHHHHHHhccC---CCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCC-
Confidence 8667899999999999999999999986333 367899999999999999999988877777777776666666665
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHh---CCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC
Q psy14484 171 SRNINKGNSANEIARCAIFDLEILLKK---NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVG 247 (430)
Q Consensus 171 ~~~~~~~~~~~~~~~~d~~~le~~l~~---~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g 247 (430)
|++++++.+++ +++++++||+|| +++++|.+.||++|+++++++|++||+++|+||||+|
T Consensus 214 ----------------d~~~l~~~l~~~~~~~~~iAavIvEp-v~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG 276 (459)
T PRK11522 214 ----------------NIEAMRTALSECKKTGDDVAAVILEP-IQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTG 276 (459)
T ss_pred ----------------CHHHHHHHHHHhhccCCcEEEEEEec-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceec
Confidence 67778877764 246799999999 9999999999999999999999999999999999999
Q ss_pred CCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh
Q psy14484 248 CGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK 327 (430)
Q Consensus 248 ~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~ 327 (430)
|||+|.+|+++++++.||++|+||+|+||++|+|++++++++++.+.. .++.|++||++||++++++.++|+.+++
T Consensus 277 ~GRtG~~~a~e~~gv~PDivt~gK~lggG~~Pigav~~~~~i~~~~~~----~~~~~~~T~~gnp~~~Aaala~L~~i~~ 352 (459)
T PRK11522 277 MGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD----NPFLHTTTFGGNPLACAAALATINVLLE 352 (459)
T ss_pred CCccchhhhhhccCCCCCEEEechhhhCCCccceeEEEcHHHHHHhcc----CCcccCCCCCCCHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999997799999999999887643 2456899999999999999999999988
Q ss_pred cCHHHHHHHHHHHHHHHHHch-hcCC-CeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec---CCEEE
Q psy14484 328 DNILQRISQDMKKITKALTSL-ITHP-KIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI---GNTVY 402 (430)
Q Consensus 328 ~~~~~~~~~~~~~l~~~l~~l-~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~---~~~lR 402 (430)
+++.+++++++++|+++|+++ .+++ .+..+++.|+++.+++. ++ +.+..+++.|+++||++.+. ++.+|
T Consensus 353 ~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~-~~-----~~~~~i~~~l~~~Gvl~~~~~~~~~~lr 426 (459)
T PRK11522 353 QNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFV-DN-----EIGYNFASEMFRQRVLVAGTLNNAKTIR 426 (459)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEec-Cc-----hHHHHHHHHHHHCCeEEEecCCCCCEEE
Confidence 899999999999999999998 5677 57899999999999998 53 22467899999999999875 47999
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 403 LMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 403 ~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
|+|++.+|++||++++++|++++.++
T Consensus 427 ~~Ppl~~t~~~id~~l~~l~~~l~~~ 452 (459)
T PRK11522 427 IEPPLTLTIEQCEQVLKAARKALAAM 452 (459)
T ss_pred EECCccCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998765
No 27
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=100.00 E-value=8e-66 Score=497.84 Aligned_cols=368 Identities=30% Similarity=0.532 Sum_probs=327.1
Q ss_pred eEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchH
Q psy14484 26 WSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 105 (430)
Q Consensus 26 ~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgte 105 (430)
+|+||.||++||||.+++|+.++||+||+|.+|++++++++.+... ...++...+++++|++.+|...++++|++||+|
T Consensus 67 ~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~~-~~~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsE 145 (442)
T TIGR03372 67 NTLIDTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHSQ-ELLDPLRALLAKTLAALTPGKLKYSFFCNSGTE 145 (442)
T ss_pred eEEEECCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCccc-ccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchH
Confidence 4899999999999999999999999999999999999988764432 456888899999999998866689999999999
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHH
Q psy14484 106 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 185 (430)
Q Consensus 106 A~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (430)
|++.|+|+++.++..+ ++.+||++.++|||++.+++++++.+.++..+.++..++.++|+|
T Consensus 146 A~e~AlklAr~~t~~~---gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~---------------- 206 (442)
T TIGR03372 146 SVEAALKLAKAYQSPR---GKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFG---------------- 206 (442)
T ss_pred HHHHHHHHHHHHHhhc---CCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCC----------------
Confidence 9999999999986433 578899999999999999999988777777788777777788776
Q ss_pred HHHHHHHHHHHh---CCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCC
Q psy14484 186 CAIFDLEILLKK---NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI 262 (430)
Q Consensus 186 ~d~~~le~~l~~---~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~ 262 (430)
|++++++.+++ +++++++||+|| +++++|.+.|+++|+++++++|++||+++|+||||+||||+|.+|+++++++
T Consensus 207 -d~~~~~~~l~~~~~~~~~vAavIvEp-v~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv 284 (442)
T TIGR03372 207 -DIEAMLKALNECKKTGDDVAAIILEP-IQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGV 284 (442)
T ss_pred -CHHHHHHHHHHHhcCCCcEEEEEEeC-ccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCC
Confidence 56677666653 356899999999 9999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q psy14484 263 WPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKIT 342 (430)
Q Consensus 263 ~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~ 342 (430)
.||++++||+|+||++|+|++++++++++.+.. +++.|++||++||++++++.++|+.++++++.+++++++++++
T Consensus 285 ~PDivt~gK~lg~G~~Pigavv~~~~i~~~~~~----~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~~~~~~G~~l~ 360 (442)
T TIGR03372 285 QPDILCLAKALGGGVMPIGATIATEAVFSVLFD----NPFLHTTTFGGNPLACAAALATINELLEKNLPAQAAIKGDFLL 360 (442)
T ss_pred CCCeeeehhhhcCCcccceEEEecHHHHHhhhc----cCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 999999999999997799999999999887742 2356899999999999999999999998999999999999999
Q ss_pred HHHHch-hcCC-CeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec---CCEEEEeCCCCCCHHHHHHH
Q psy14484 343 KALTSL-ITHP-KIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI---GNTVYLMPPYILNKNEIQHM 417 (430)
Q Consensus 343 ~~l~~l-~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~---~~~lR~~~~~~~t~e~i~~~ 417 (430)
++|+++ .+++ .+..+++.|+|+++++. ++ ..+..+++.|+++||++.+. ++.+||+|++++|+++++++
T Consensus 361 ~~L~~l~~~~~~~i~~vRG~Gl~~giel~-~~-----~~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~ 434 (442)
T TIGR03372 361 DGFQQLAAEYPDLIIEARGKGLLMAIEFR-DN-----EIGYAFAKELFQQNILVAGTLNNAKSIRIEPPLTITIEQCALV 434 (442)
T ss_pred HHHHHHHHhCCCceEEEecceEEEEEEeC-Ch-----HHHHHHHHHHHHCCcEEeecCCCCCEEEEECCcccCHHHHHHH
Confidence 999998 5677 67899999999999998 53 22467999999999999764 37999999999999999999
Q ss_pred HHHHHHHH
Q psy14484 418 TSAIFQTF 425 (430)
Q Consensus 418 ~~~l~~~l 425 (430)
+++|++++
T Consensus 435 ~~~l~~~~ 442 (442)
T TIGR03372 435 IKAAKDAL 442 (442)
T ss_pred HHHHHHhC
Confidence 99998864
No 28
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=100.00 E-value=1.4e-65 Score=496.03 Aligned_cols=397 Identities=36% Similarity=0.655 Sum_probs=344.8
Q ss_pred ceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCC
Q psy14484 14 NLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYK 93 (430)
Q Consensus 14 ~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (430)
+.++.+++|+ |+||.|||+||||.+++|+.++||+||+|.+|++++++++.+.......++...+++++|.+..|.+
T Consensus 26 ~~~i~~a~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~ 102 (428)
T PRK07986 26 VYPVVSAEGC---ELILADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHPPAIELCRKLVAMTPQP 102 (428)
T ss_pred CeeEEeeeee---EEEeCCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCccccccCCHHHHHHHHHHHhhCCCC
Confidence 3778888777 8999999999999999999999999999999999999987655443567888999999999999866
Q ss_pred CCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCC-ccchhhhhccCCCeeEeCCCCCC
Q psy14484 94 LGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNI-QSFKEIYTSLLNKTYIITTPDSR 172 (430)
Q Consensus 94 ~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 172 (430)
.++++|++||+||++.|+|+++.+++.+| ++|.+||.+.++|||.+.+++++++. ..++..|.+...+..+++.|...
T Consensus 103 ~~~v~f~~SGsEAve~AlklAr~~~~~~g-~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 181 (428)
T PRK07986 103 LECVFLADSGSVAVEVAMKMALQYWQAKG-EPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSR 181 (428)
T ss_pred cCEEEEeCCcHHHHHHHHHHHHHHHHhcC-CCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcc
Confidence 78999999999999999999999866555 36889999999999999999888764 33555666666666667666422
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcc
Q psy14484 173 NINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTG 252 (430)
Q Consensus 173 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g 252 (430)
. .+++..+|++++++.+++.++++++|++||++++++|.++|+++||++|+++|++||++||+||||+||||+|
T Consensus 182 ~------~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG 255 (428)
T PRK07986 182 F------DGEWDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTG 255 (428)
T ss_pred c------chhhHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCC
Confidence 1 1234567899999999876678999999993399999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHH
Q psy14484 253 KFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQ 332 (430)
Q Consensus 253 ~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~ 332 (430)
.+|+++++++.||++++||+++||++|+|++++++++++.+.. .....+.|++||++||++++++.++|+.++++++.+
T Consensus 256 ~~fa~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~-~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~~~~~ 334 (428)
T PRK07986 256 KLFACEHAGIAPDILCLGKALTGGTMTLSATLTTREVAETISN-GEAGCFMHGPTFMGNPLACAVANASLSLLESGDWQQ 334 (428)
T ss_pred CeeeecccCCCCCEEEechhhhCCcccCcchhchHHHHHHhhc-CCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHH
Confidence 9999999999999999999999997899999999999988864 112245689999999999999999999998889999
Q ss_pred HHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecCCEEEEeCCCCCCHH
Q psy14484 333 RISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKN 412 (430)
Q Consensus 333 ~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~~~lR~~~~~~~t~e 412 (430)
++++++++|+++|+++..++.+..+++.|+++.+++. ... . +..+.+.|+++|+++.+.++.+||+|++++|++
T Consensus 335 ~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~~-~~~---~--~~~~~~~l~~~Gl~~~~~g~~i~~~Ppl~it~~ 408 (428)
T PRK07986 335 QVAAIEAQLREELAPLRDAPMVADVRVLGAIGVVETT-RPV---N--MAALQRFFVEQGVWIRPFGKLIYLMPPYIILPE 408 (428)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEeEeccceEEEEEeC-Ccc---c--HHHHHHHHHHCCcEEEecCCEEEEeCCCCCCHH
Confidence 9999999999999998557788899999999999987 431 1 467899999999999988899999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy14484 413 EIQHMTSAIFQTFNE 427 (430)
Q Consensus 413 ~i~~~~~~l~~~l~~ 427 (430)
||++++++|++++.+
T Consensus 409 ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 409 QLQRLTAAVNRAVQD 423 (428)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999999864
No 29
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=6.9e-65 Score=496.04 Aligned_cols=399 Identities=28% Similarity=0.402 Sum_probs=337.0
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
..|.++.+++|. |+||.||++||||.+++|+.++||+||+|.+|+++++.+........+.++...+++++|.+.+|
T Consensus 39 ~~p~~~~~a~G~---~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lAe~L~~~~p 115 (459)
T PRK06931 39 KLPLAIAKAQGV---WVTDVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTLDLTTPLKDAFSEYLLSLLP 115 (459)
T ss_pred CCCceEEecccc---EEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhccccccccCCHHHHHHHHHHHHhCC
Confidence 458899999888 79999999999999999999999999999999999998643222224677888999999999987
Q ss_pred CCC---CeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCC
Q psy14484 92 YKL---GHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITT 168 (430)
Q Consensus 92 ~~~---~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (430)
... ..+++++||+||++.|+|+++.++ +|.+||.+.++|||++.+++++++.+.++..+.+...++.++++
T Consensus 116 ~~~~~~~~~f~~~SGsEAve~AlklAr~~t------gr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~ 189 (459)
T PRK06931 116 GQGKEYCLQFTGPSGADAVEAAIKLAKTYT------GRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPY 189 (459)
T ss_pred CccccceEEEeCCCcHHHHHHHHHHHHHhc------CCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCC
Confidence 332 245666999999999999999986 88999999999999999999888877777777777777888888
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHh---CCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccc
Q psy14484 169 PDSRNINKGNSANEIARCAIFDLEILLKK---NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIA 245 (430)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~---~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~ 245 (430)
|+.++.+++...++......+.+++.+.+ .++++++||+|| +++++|.++|+++|+++|+++|++||++||+|||+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EP-iqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~ 268 (459)
T PRK06931 190 PHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEA-IQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQ 268 (459)
T ss_pred CccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEcc-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecch
Confidence 88777665433222111122223444432 245799999999 99999999999999999999999999999999999
Q ss_pred cCCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHH
Q psy14484 246 VGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIF 325 (430)
Q Consensus 246 ~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~ 325 (430)
+||||+|.+|+++++++.||++++||+++|| +|+|++++++++ +.+.. ..|++||++||++|+++.++|+++
T Consensus 269 tGfGRtG~~~a~~~~gv~PDivt~gK~l~gG-~Pi~av~~~~~~-~~~~~------~~~~~T~~gnpla~aaala~L~~l 340 (459)
T PRK06931 269 AGFARTGKMFAFEHAGIEPDIIVMSKAVGGG-LPLAVLGIKKEF-DAWQP------GGHTGTFRGNQLAMATGLTTLKIL 340 (459)
T ss_pred hcCCcCchHHHhhhcCCCCCEEEecccccCC-cceeeeeeHHHH-hhccC------CCCCCCCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 799999988774 55532 358999999999999999999999
Q ss_pred hhcCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCcc---------chhHHHHHHHHHHHCCcEEe
Q psy14484 326 NKDNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQ---------IETFSKKFFVAALKNELLLR 395 (430)
Q Consensus 326 ~~~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~---------~~~~a~~~~~~l~~~Gv~~~ 395 (430)
+++++.+++++++++|+++|+++ .++|.+..+++.|+|+++++. ++... ..+.+..+.+.|+++|+++.
T Consensus 341 ~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Glm~giel~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~ 419 (459)
T PRK06931 341 KEENLAQNAAERGEWLKAQLAELQKRYPCIGNVRGRGLMIGIEIV-DERQPADAMGSYPADGELAAAIQKACFENGLLLE 419 (459)
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHhCCCeEeEecCceEEEEEEc-cCcccccccccCCccHHHHHHHHHHHHHCCcEEe
Confidence 99999999999999999999999 678888999999999999996 53211 12345678889999999997
Q ss_pred ec---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 396 PI---GNTVYLMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 396 ~~---~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
+. ++++||.|++++|++||++++++|++++.+++
T Consensus 420 ~~~~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~~ 456 (459)
T PRK06931 420 RGGRNGNVVRLLPPLLITQAECEEFIDRFEQALLAAV 456 (459)
T ss_pred ecCCCCCEEEEECCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 65 47899999999999999999999999998764
No 30
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.2e-64 Score=489.78 Aligned_cols=398 Identities=33% Similarity=0.584 Sum_probs=341.8
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
..|.++.+++|. |+||.||++||||.+++|+.+|||+||+|.+|++++++++.+.......++...+++++|++..|
T Consensus 21 ~~p~~i~~a~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p 97 (422)
T PRK05630 21 VRNRLVTSTDGV---FLTLEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFGGLTHEPAIKLTRKLLNLTD 97 (422)
T ss_pred CCCeeEEeceee---EEEECCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHhhCC
Confidence 457899999887 79999999999999999999999999999999999999876554444678889999999999987
Q ss_pred CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCC-ccchhhhhccCCCeeEeCCCC
Q psy14484 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNI-QSFKEIYTSLLNKTYIITTPD 170 (430)
Q Consensus 92 ~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 170 (430)
.+.++++|++||+||++.|+|+++.++..+|.++|.+||++.++|||.+.+++++++. +.++..|.+......+++.|.
T Consensus 98 ~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~ 177 (422)
T PRK05630 98 NGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPP 177 (422)
T ss_pred CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCc
Confidence 5678999999999999999999999987778778899999999999999999988764 345556666555666676663
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEcccc-ccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCC
Q psy14484 171 SRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLV-QCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG 249 (430)
Q Consensus 171 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v-~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g 249 (430)
... .+.++ ....++.+++.+. +++++||+|| + ++++|.+.|+++|+++|+++|++||++||+|||++|||
T Consensus 178 ~~~----~~~~~-~~~~~~~~~~~~~---~~iAAvi~EP-i~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~G 248 (422)
T PRK05630 178 VRG----SSPQE-ISEYLRSLELLID---ETVAAIIIEP-IVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFG 248 (422)
T ss_pred ccC----CChHH-HHHHHHHHHHHHh---hceEEEEEec-hhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCC
Confidence 211 11111 1123566777664 5899999999 7 99999999999999999999999999999999999999
Q ss_pred CcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcC
Q psy14484 250 RTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDN 329 (430)
Q Consensus 250 ~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~ 329 (430)
|+|.+|+++.+++.||++|+||+++||+.|+|++++++++++.+........+.|++||++||++++++.++|+++++++
T Consensus 249 rtG~~~a~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~~ 328 (422)
T PRK05630 249 RTGELFATLAAGVTPDIMCVGKALTGGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETGM 328 (422)
T ss_pred cCchhhHHHhcCCCCCeeeeechhhcCccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999977999999999999887541112345689999999999999999999998889
Q ss_pred HHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecCCEEEEeCCCCC
Q psy14484 330 ILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYIL 409 (430)
Q Consensus 330 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~~~lR~~~~~~~ 409 (430)
+.+++++++++|++.|+.+..++.+.++++.|+++.+++. +... +..+.+.++++|+++.+.++++||.|++++
T Consensus 329 ~~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~~~ie~~-~~~~-----~~~~~~~~~~~Gl~~~~~g~~l~~~PpL~i 402 (422)
T PRK05630 329 WRKQVKRIEAELIAGLSPLAHLPGVADVRVLGAIGVVEME-QPVD-----MEEATQAAVDHGVWLRPFGRLVYVMPPYIT 402 (422)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeeeeeccccEEEEEEC-Cccc-----HHHHHHHHHHCCeEEEecCCEEEEECCccC
Confidence 9999999999999999888557788899999999999997 4311 357888999999999988899999999999
Q ss_pred CHHHHHHHHHHHHHHHHH
Q psy14484 410 NKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 410 t~e~i~~~~~~l~~~l~~ 427 (430)
|++||++++++|++++..
T Consensus 403 t~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 403 TSEQIAQICAALAAAVKA 420 (422)
T ss_pred CHHHHHHHHHHHHHHHhc
Confidence 999999999999999864
No 31
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=2.9e-64 Score=490.98 Aligned_cols=400 Identities=40% Similarity=0.740 Sum_probs=347.7
Q ss_pred CceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCC
Q psy14484 13 NNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQY 92 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 92 (430)
.|.++.+++|+ |+||.||++||||.+++|+.++||+||+|.+|++++++++.+.....+.++...+++++|.+.+|.
T Consensus 24 ~p~~~~~~~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~ 100 (423)
T PRK05964 24 PPIPIVRAEGA---YLYLADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAGFTHEPAERLAQRLVALTPG 100 (423)
T ss_pred CCeeEEecccc---EEEeCCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCC
Confidence 57899999887 899999999999999999999999999999999999998765443356788889999999999875
Q ss_pred CCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCC
Q psy14484 93 KLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSR 172 (430)
Q Consensus 93 ~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (430)
+.++++|++||+||++.|+|+++.++..+|.++|.+||.+.++|||.+.+++++++.+.++..+.+...+..++++|+..
T Consensus 101 ~~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d 180 (423)
T PRK05964 101 GLDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDG 180 (423)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcch
Confidence 67899999999999999999999997777777899999999999999999999888766666666655556677776421
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcc
Q psy14484 173 NINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTG 252 (430)
Q Consensus 173 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g 252 (430)
....+++++++.+.++++++++|++||++++++|+++|+++|+++|+++|++||++||+||+|+|+||+|
T Consensus 181 ----------~~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G 250 (423)
T PRK05964 181 ----------YEQATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTG 250 (423)
T ss_pred ----------hHHHHHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc
Confidence 1123589999999876778999999994499999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHH
Q psy14484 253 KFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQ 332 (430)
Q Consensus 253 ~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~ 332 (430)
.+++++.+++.||++++||+++||++|+|++++++++++.+........+.+++||++||++++++.++|+.++++++.+
T Consensus 251 ~~~a~~~~~v~pDi~~~~K~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~~~~ 330 (423)
T PRK05964 251 TLFACEQAGVSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEPVLE 330 (423)
T ss_pred chhHHHhcCCCCCeeeeehhhhcCcccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcCHHH
Confidence 88888889999999999999999878999999999999887531112345688999999999999999999998889999
Q ss_pred HHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecCCEEEEeCCCCCCHH
Q psy14484 333 RISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKN 412 (430)
Q Consensus 333 ~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~~~lR~~~~~~~t~e 412 (430)
+++++++++++.|+++..++.+..+++.|+++.+++. ++.. ...+..+.+.|.++||++.+.++.+||+|++++|++
T Consensus 331 ~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~-~~~~--~~~~~~l~~~l~~~Gv~v~~~~~~lR~~p~l~~t~e 407 (423)
T PRK05964 331 RVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELD-RPVL--ERDGPALRAFALERGVLLRPLGNTIYLMPPYIITAE 407 (423)
T ss_pred HHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEec-cCcc--hhHHHHHHHHHHHCCeEEEecCCEEEEeCCcccCHH
Confidence 9999999999999988557777788999999999997 5321 112467899999999999988889999999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q psy14484 413 EIQHMTSAIFQTFNEV 428 (430)
Q Consensus 413 ~i~~~~~~l~~~l~~~ 428 (430)
|||+++++|+++++++
T Consensus 408 dId~~v~~l~~al~~~ 423 (423)
T PRK05964 408 ELDRITDAIVEVADEL 423 (423)
T ss_pred HHHHHHHHHHHHHhhC
Confidence 9999999999999874
No 32
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=4e-64 Score=489.84 Aligned_cols=398 Identities=24% Similarity=0.385 Sum_probs=340.3
Q ss_pred CceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCC
Q psy14484 13 NNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQY 92 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 92 (430)
.|+++.+++|. |+||.||++||||.+++|+.++||+||+|.+|++++++++.+.......++...+++++|.+..|.
T Consensus 35 ~p~~~~~~~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~ 111 (457)
T PRK05639 35 FPLVPKRGFGA---LIEDVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMIGYTHSERAIRVAEKLAEISPI 111 (457)
T ss_pred CCceEEeeecC---EEEeCCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccccccCccCCHHHHHHHHHHHhhCCC
Confidence 58899999888 899999999999999999999999999999999999998755433344568888999999999875
Q ss_pred CCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCC-ccchhhhhccCCCeeEeCCCCC
Q psy14484 93 KLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNI-QSFKEIYTSLLNKTYIITTPDS 171 (430)
Q Consensus 93 ~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 171 (430)
..++++|++||+||++.|+|+++.++ ++.+||.+.++|||++.+++++++. ..++..+.+...++.++++|+.
T Consensus 112 ~~~~v~f~~SGsEA~e~AlklAr~~t------gr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~ 185 (457)
T PRK05639 112 ENPKVLFGLSGSDAVDMAIKVSKFST------RRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNP 185 (457)
T ss_pred CcCEEEEeCchHHHHHHHHHHHHHhc------CCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCcc
Confidence 56899999999999999999999885 8889999999999999988887764 3355666666667778888866
Q ss_pred CCCCCC----CChhHHHHHHHHHHHHHHHh---CCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecc
Q psy14484 172 RNINKG----NSANEIARCAIFDLEILLKK---NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEI 244 (430)
Q Consensus 172 ~~~~~~----~~~~~~~~~d~~~le~~l~~---~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv 244 (430)
++.+.. .+.+......++.+++.+.. .++++++||+|| +++++|.++|+++|+++|+++|++||++||+|||
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EP-iqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv 264 (457)
T PRK05639 186 YRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEP-IQGDAGIVVPPENFFKELKKLLDEHGILLVMDEV 264 (457)
T ss_pred ccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECC-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEech
Confidence 554322 12334444456778877643 257899999999 9999999999999999999999999999999999
Q ss_pred ccCCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHH
Q psy14484 245 AVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEI 324 (430)
Q Consensus 245 ~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~ 324 (430)
++||||+|.+|+++++++.||++++||+++|| +|+|++++++++++. .. + .+.+|++++|++++++.++|+.
T Consensus 265 ~tG~GrtG~~~a~~~~gv~PDiv~~gK~l~gG-~pi~av~~~~~i~~~-~~----~--~~~~T~~g~p~~~aaa~a~l~~ 336 (457)
T PRK05639 265 QTGIGRTGKWFASEWFEVKPDLIIFGKGVASG-MGLSGVIGRKELMDL-TS----G--SALLTPAANPVISAAAEATLEI 336 (457)
T ss_pred hhccCcCchHHHHHhcCCCCCEEEechhhcCC-CcceeEEehHHHHhh-cC----C--CcccCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 699999999999883 22 1 2568999999999999999999
Q ss_pred HhhcCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCc-cchhHHHHHHHHHHHCCcEEeec---CC
Q psy14484 325 FNKDNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPE-QIETFSKKFFVAALKNELLLRPI---GN 399 (430)
Q Consensus 325 ~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~a~~~~~~l~~~Gv~~~~~---~~ 399 (430)
++++++.+++++++++|+++|+++ .+++.+.+++|.|+|+++++. .+.. .....+..+.+.|+++|+++.+. ++
T Consensus 337 l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~-~~~~~~~~~~~~~~~~~~~~~Gv~~~~~g~~~~ 415 (457)
T PRK05639 337 IEEENLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIV-KENGKPDPELTGKICWRAFELGLILPSYGMFGN 415 (457)
T ss_pred HHHccHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEe-cCCCCCCHHHHHHHHHHHHhCCeEEeecCCCCC
Confidence 999999999999999999999998 678888899999999999996 4321 12234578899999999999875 37
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 400 TVYLMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 400 ~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
.+||.|++++|++|+++++++|++++.++.
T Consensus 416 ~lr~~Ppl~it~~~id~~~~~l~~~l~~~~ 445 (457)
T PRK05639 416 VIRITPPLVITKEIAEKGLEIMERAIKDAL 445 (457)
T ss_pred EEEEeCCCccCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998653
No 33
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=100.00 E-value=1.1e-63 Score=487.49 Aligned_cols=399 Identities=27% Similarity=0.401 Sum_probs=336.3
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
+.|+++.+++|+ |+||.||++||||.+++|+.++||+||+|.+|+++++++..+.....+.++...+++++|.+.+|
T Consensus 20 ~~p~~~~~~~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p 96 (442)
T TIGR00709 20 KLPTAFAKAQGC---WVTDVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIP 96 (442)
T ss_pred CCCceEEecccc---EEEeCCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCC
Confidence 357899999888 79999999999999999999999999999999999998765443334678889999999999987
Q ss_pred CC---CCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCC
Q psy14484 92 YK---LGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITT 168 (430)
Q Consensus 92 ~~---~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (430)
.. ...+++++||+||++.|+|+++.++ +|.+||++.++|||.+.+++++++.+.++..+.+...+..++++
T Consensus 97 ~~~~~~~~~f~~~sGsEA~e~AlklAr~~t------gr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~ 170 (442)
T TIGR00709 97 KRKMDYKLQFPGPSGADAVEAAIKLAKTYT------GRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPY 170 (442)
T ss_pred CcCCCccEEEeCCCHHHHHHHHHHHHHHhc------CCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCC
Confidence 32 2335667999999999999999986 78899999999999999999998866666666666666777788
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHh---CCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccc
Q psy14484 169 PDSRNINKGNSANEIARCAIFDLEILLKK---NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIA 245 (430)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~---~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~ 245 (430)
|+.++.+++.+.+.......+.+++.++. .++++++||+|| +++++|.++|+++|+++|+++|++||+++|+||||
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Ep-i~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~ 249 (442)
T TIGR00709 171 PHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEA-IQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQ 249 (442)
T ss_pred CccccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEcc-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc
Confidence 87666554333222212223334555532 236799999999 99999999999999999999999999999999999
Q ss_pred cCCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHH
Q psy14484 246 VGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIF 325 (430)
Q Consensus 246 ~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~ 325 (430)
+||||+|.+|+++++++.||++++||++++| +|+|+++++++ ++.+.. ..|++||++||++++++.++|+.+
T Consensus 250 tGfGRtG~~~a~~~~gv~PDiv~~gK~l~~G-~Pigav~~~~~-~~~~~~------~~~~~T~~gnpla~aaa~a~L~~i 321 (442)
T TIGR00709 250 AGFGRSGTMFAFEHAGIEPDFVVMSKAVGGG-LPLAVLLIAPE-FDAWQP------AGHTGTFRGNQLAMVTGTEALNYW 321 (442)
T ss_pred cCCCCCCchhHHHHcCCCCcEEEEcccccCC-cccEEEEEchH-HhccCC------CcCCCCCCcCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 79999999988 454432 347899999999999999999999
Q ss_pred hhcCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCcc---------chhHHHHHHHHHHHCCcEEe
Q psy14484 326 NKDNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQ---------IETFSKKFFVAALKNELLLR 395 (430)
Q Consensus 326 ~~~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~---------~~~~a~~~~~~l~~~Gv~~~ 395 (430)
+++++.+++++++++|+++|+++ .+++.+..+++.|+|+++++. ++..+ ....+..+...|+++|+++.
T Consensus 322 ~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~ 400 (442)
T TIGR00709 322 KDDNLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMIV-DERQSKDATGAYPRDCELAAAIQGACFENGLLLE 400 (442)
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEc-cCcccccccccCCcchHHHHHHHHHHHHCCeEEe
Confidence 88999999999999999999998 678888999999999999997 53211 11245678889999999997
Q ss_pred ec---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 396 PI---GNTVYLMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 396 ~~---~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
+. ++++||.|++++|++|+++++++|++++.+++
T Consensus 401 ~~~~~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~~ 437 (442)
T TIGR00709 401 TGGREGEVFRLLCPITIDQEECEEGISRFKQAVEEAL 437 (442)
T ss_pred ecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 65 58999999999999999999999999998763
No 34
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=9.4e-64 Score=488.54 Aligned_cols=397 Identities=27% Similarity=0.424 Sum_probs=333.9
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
+.|.++.+++|+ |+||.||++||||.+++|+.++||+||+|.+|++++++++.+.......++...+++++|.+.+|
T Consensus 37 ~~p~~i~~~~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p 113 (443)
T PRK06058 37 TLPVYVARAGGG---IVEDVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHTCFMVTPYEGYVAVAEQLNRLTP 113 (443)
T ss_pred CCCceEEeeeee---EEEeCCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCC
Confidence 357899999887 89999999999999999999999999999999999998865443334567888999999999987
Q ss_pred CC-CCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCC-ccchhhhhccCCCeeEeCCC
Q psy14484 92 YK-LGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNI-QSFKEIYTSLLNKTYIITTP 169 (430)
Q Consensus 92 ~~-~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 169 (430)
.. .++++|++||+||++.|+|+++.++ ++++||++.++|||++.+++++++. ..++..+.++......+++|
T Consensus 114 ~~~~~~v~f~~sGseA~e~AlklAr~~t------gr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (443)
T PRK06058 114 GDHEKRSALFNSGAEAVENAVKIARSYT------GRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMS 187 (443)
T ss_pred CCCCCEEEEeCCcHHHHHHHHHHHHHhh------CCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCC
Confidence 33 3699999999999999999999986 7889999999999999999988764 23555565555566666655
Q ss_pred CCCCCCCC--CChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC
Q psy14484 170 DSRNINKG--NSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVG 247 (430)
Q Consensus 170 ~~~~~~~~--~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g 247 (430)
..++.... ...++.....++.+++.+. ++++++||+|| +++++|.++|+++|+++|+++|++||+++|+||||+|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~iAavi~EP-i~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tG 264 (443)
T PRK06058 188 YPYRDPKGLATDGEEAAARAITVIEKQVG--ADNLAAVIIEP-IQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTG 264 (443)
T ss_pred cccccccccccchHHHHHHHHHHHHHhhC--CCceEEEEECC-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC
Confidence 44332110 1111222224455555553 46899999999 9999999999999999999999999999999999999
Q ss_pred CCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh
Q psy14484 248 CGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK 327 (430)
Q Consensus 248 ~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~ 327 (430)
|||+|.+|+++++++.||++++||+++|| +|+|++++++++++.+.. ..+++||++||++++++.++|+.+++
T Consensus 265 fgRtG~~fa~~~~gv~PDiv~~gK~l~~G-~Pi~av~~~~~i~~~~~~------~~~~~T~~gnpl~~aaa~a~L~~~~~ 337 (443)
T PRK06058 265 FARTGAWFACEHEGIVPDLITTAKGIAGG-LPLSAVTGRAEIMDAPHP------GGLGGTYGGNPVACAAALAAIETIEE 337 (443)
T ss_pred CCcChhhhHHHhcCCCCCEEEEcccccCC-CccEEEEEcHHHHhhccC------CCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 799999999999888764 34789999999999999999999988
Q ss_pred cCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCC--ccchhHHHHHHHHHHHCCcEEeec---CCEE
Q psy14484 328 DNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDP--EQIETFSKKFFVAALKNELLLRPI---GNTV 401 (430)
Q Consensus 328 ~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~a~~~~~~l~~~Gv~~~~~---~~~l 401 (430)
+++.+++++++++++++|+++ ..++.+..+++.|+|+++++. ++. .....++..+.+.|+++||++.+. ++++
T Consensus 338 ~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~-~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~~~~~~l 416 (443)
T PRK06058 338 DDLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIELV-KPGTTEPDAELTKALAAAAHAAGVIVLTCGTYGNVI 416 (443)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEEEEe-cCCCCCCcHHHHHHHHHHHHHCCeEEeccCCCCCEE
Confidence 999999999999999999998 567888899999999999997 532 112234678889999999999875 4799
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 402 YLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 402 R~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
||.|++++|+++|++++++|++++.++
T Consensus 417 r~~Ppl~~t~~~i~~~~~~l~~~l~~~ 443 (443)
T PRK06058 417 RLLPPLVIGDELLREGLDVLEAALADL 443 (443)
T ss_pred EEECCCccCHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999998763
No 35
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.3e-63 Score=484.54 Aligned_cols=399 Identities=25% Similarity=0.431 Sum_probs=343.9
Q ss_pred CceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCC
Q psy14484 13 NNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQY 92 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 92 (430)
.|+++.+++|+ |+||.|||+||||.+++|+.++||+||+|.+|++++++++.+.....+.++...+++++|++.+|.
T Consensus 24 ~p~~~~~a~G~---~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~ 100 (445)
T PRK08593 24 YPLVIDHGYGA---TLTDVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPAYMYHEPLVRLAKKLCELAPG 100 (445)
T ss_pred CCceEEeeeeC---EEEeCCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCC
Confidence 58899999887 799999999999999999999999999999999999998766544456789999999999999874
Q ss_pred CC-CeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCc-cchhhhhccCCCeeEeCCCC
Q psy14484 93 KL-GHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ-SFKEIYTSLLNKTYIITTPD 170 (430)
Q Consensus 93 ~~-~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 170 (430)
.. ++|+|++||+||++.|+|+++.++ +|.+||.++++|||++.+++++++.. .++..+.+...++.++++|+
T Consensus 101 ~~~~~v~f~~SGseA~e~AiklAr~~t------gr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~ 174 (445)
T PRK08593 101 DFEKRVTFGLSGSDANDGIIKFARAYT------GRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPD 174 (445)
T ss_pred CCCCEEEECCchHHHHHHHHHHHHHhh------CCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCc
Confidence 43 699999999999999999999986 88899999999999999999888743 34556667677777888887
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHhC--CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCC
Q psy14484 171 SRNINKGNSANEIARCAIFDLEILLKKN--HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGC 248 (430)
Q Consensus 171 ~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~ 248 (430)
.++.+.....++.....++++++.+.++ ++++++||+|| +++++|.++|+++|+++|+++|++||++||+||||+||
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EP-v~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~ 253 (445)
T PRK08593 175 KYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVACIVIET-IQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGL 253 (445)
T ss_pred cccccccCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEcc-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCC
Confidence 7665433222233333467777777643 46899999999 99999999999999999999999999999999999999
Q ss_pred CCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhc
Q psy14484 249 GRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD 328 (430)
Q Consensus 249 g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~ 328 (430)
||+|.+++++.+++.||++++||+++|| +|+|++++++++++.+.. ..+..|++++|++++++.++|+.++++
T Consensus 254 GrtG~~~a~~~~gv~pDi~t~gK~l~~G-~p~gav~~~~~i~~~~~~------~~~~~T~~~~pl~~aaa~a~l~~l~~~ 326 (445)
T PRK08593 254 GRTGKWSSISHFNITPDLMSFGKSLAGG-MPMSAIVGRKEIMESLEA------PAHLFTTGANPVSCAAALATIDMIEDE 326 (445)
T ss_pred CcCchHHHHHhcCCCCCEeeecccccCC-cccEEEEEcHHHHhhhcc------CCCCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 9999988889999999999999999999 799999999999888753 136779999999999999999999888
Q ss_pred CHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCc---cchhHHHHHHHHHHHCCcEEeec-CCEEEE
Q psy14484 329 NILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPE---QIETFSKKFFVAALKNELLLRPI-GNTVYL 403 (430)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~a~~~~~~l~~~Gv~~~~~-~~~lR~ 403 (430)
++.+++++++++|+++|+++ .+++.+..+++.|+++++++. .+.. .....+..+++.|+++||++.+. ++.+||
T Consensus 327 ~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~-~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~~~~lr~ 405 (445)
T PRK08593 327 SLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIV-SDKKLKTRDNEAALKICNYCFEHGVVIIAVAGNVLRF 405 (445)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEe-cCCCcCCCcHHHHHHHHHHHHHCCeEEeccCCCEEEE
Confidence 99999999999999999998 678888999999999999987 4321 12233578999999999999774 589999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 404 MPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 404 ~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
+|++.+|++||++++++|++++.++.
T Consensus 406 ~p~l~~t~~~id~~~~~l~~~l~~~~ 431 (445)
T PRK08593 406 QPPLVITYEQLDTALNTIEQAFTALE 431 (445)
T ss_pred ECCCccCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999998763
No 36
>KOG1402|consensus
Probab=100.00 E-value=3.6e-64 Score=438.31 Aligned_cols=386 Identities=29% Similarity=0.453 Sum_probs=341.9
Q ss_pred ccccCCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHH
Q psy14484 7 FKKKSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKL 86 (430)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l 86 (430)
.+.+++-|.++.+++|+ ++||.+|++|+||.+++++.+.||+||.|.++++++.+++...++ .+..+..-++++.+
T Consensus 35 ahnyhpLpvvf~ka~g~---~vwD~eGk~ylDflsaysaVnqGhchpki~~aLqeq~~kLtlssr-afYnd~~~~f~~~v 110 (427)
T KOG1402|consen 35 AHNYHPLPVVFSKAKGS---RVWDPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLTLSSR-AFYNDVLGEFAEYV 110 (427)
T ss_pred cccCCcCceEEEecCCc---EEECCCccchhhhhhhhhhcccCCCCHHHHHHHHHHHhHhhhhhH-HHhhhhHHHHHHHH
Confidence 45677888999999998 799999999999999999999999999999999999998654432 34456778899999
Q ss_pred HhhcCCCCCeEEEcCCchHHHHHHHHHHHHhh-hhcCCC-CCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCC-e
Q psy14484 87 SSLTQYKLGHCFYGSDGASAVEVALKMSFHYW-YNKGFL-NKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNK-T 163 (430)
Q Consensus 87 ~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~-~~~g~~-~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~ 163 (430)
.+++ +.+.++.+++|.||++.|+|++|.|. +.++.| .+.+|+.-.++|||.+.++.+++..+.-...|.|+.+. +
T Consensus 111 t~lf--~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~ 188 (427)
T KOG1402|consen 111 TKLF--GYDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVV 188 (427)
T ss_pred HHhc--CcceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcc
Confidence 9999 78899999999999999999999664 455555 55678888999999999999999887666678877666 4
Q ss_pred eEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEec
Q psy14484 164 YIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADE 243 (430)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DE 243 (430)
..+++. |+++|+.+++ .++++++++|| +|++.|.++||+.||++++++|++|++++|.||
T Consensus 189 ~~v~Y~-----------------d~eale~~l~--~~~vaaFivEP-IQGEaGVvvP~~GYL~~vreLCtkynvl~I~DE 248 (427)
T KOG1402|consen 189 DKVPYG-----------------DAEALEVALK--SPNVAAFIVEP-IQGEAGVVVPPPGYLKKVRELCTKYNVLLIADE 248 (427)
T ss_pred eeeccC-----------------CHHHHHHHhc--CCCeeEEEeec-cccccceEeCCchhHHHHHHHHHhhcEEEEehh
Confidence 556554 8999999998 47999999999 999999999999999999999999999999999
Q ss_pred cccCCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHH
Q psy14484 244 IAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLE 323 (430)
Q Consensus 244 v~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~ 323 (430)
+|+|++|+|++++.++..+.||++.|+|+++||.+|+++++++++++-.+.+ ..|++||++||++++++.++|+
T Consensus 249 vQTGl~RTGk~la~d~env~PDivilgKalSGG~~Pvsavl~~~~im~~~~p------geHgsTyggNpLg~~vaiAale 322 (427)
T KOG1402|consen 249 VQTGLARTGKLLACDYENVRPDIVILGKALSGGVYPVSAVLADDDIMLNIKP------GEHGSTYGGNPLGCAVAIAALE 322 (427)
T ss_pred hhhcccccCcEEEeehhhcCCCeEEEeccccCCeeeeEEEEecHHHHhccCC------CccccccCCChHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999988766 4599999999999999999999
Q ss_pred HHhhcCHHHHHHHHHHHHHHHHHch-hcCCC-eeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-CE
Q psy14484 324 IFNKDNILQRISQDMKKITKALTSL-ITHPK-IINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NT 400 (430)
Q Consensus 324 ~~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-~~ 400 (430)
.+.++++.++.+.++..|+.+|..+ ...|+ +..++|+|++.++++. ..+. +...+-.+|-.|.++|++..|.+ +.
T Consensus 323 vi~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~-~~~~-~~~~aw~~cl~lk~~g~LAkptH~~I 400 (427)
T KOG1402|consen 323 VIVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVIN-PSKT-SGQDAWDVCLALKENGLLAKPTHGNI 400 (427)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEec-cccc-cchhHHHHHHcccccccccCCCCCCe
Confidence 9999999999999999999999999 56665 6789999999999997 5332 22225678889999999998875 78
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 401 VYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 401 lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
+||.|++.++++|+++.++++++++.
T Consensus 401 iRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 401 IRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred EEecCCcccCHHHHHHHHHHHHHHhc
Confidence 99999999999999999999998764
No 37
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=5.4e-63 Score=482.71 Aligned_cols=395 Identities=28% Similarity=0.446 Sum_probs=340.5
Q ss_pred CceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCC
Q psy14484 13 NNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQY 92 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 92 (430)
.+.++.+++|. |+||.||++||||+++ ++.+|||+||+|.+|++++++++.+.. ..+.++...+++++|++.+|.
T Consensus 54 ~~~~i~~a~G~---~l~D~dG~~ylD~~g~-~~~~lGh~~p~v~~Ai~~ql~~~~~~~-~~~~~~~~~~lae~L~~~~p~ 128 (459)
T PRK06082 54 CLDVLASAEGI---YIEDVDGKKYMDFHGN-NVHQLGYGHPHVIEKVKEQMAKLPFSP-RRFTNETAIECAEKLTEIAGG 128 (459)
T ss_pred CCceEEeeeee---EEEECCCCEEEEcccH-hhcccCCCCHHHHHHHHHHHHhCCCcc-CccCCHHHHHHHHHHHHhCCC
Confidence 36888889887 7999999999999854 899999999999999999999876533 356789999999999999975
Q ss_pred CCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCC
Q psy14484 93 KLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSR 172 (430)
Q Consensus 93 ~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (430)
..++++|++||+||+++|+|+++.++ ++.+||++.++|||++.+++++++.+.++..+.+...++..++.|..+
T Consensus 129 ~~~~v~f~~sGseAve~AlklAr~~t------gr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (459)
T PRK06082 129 ELNRVLFAPGGTSAIGMALKLARHIT------GNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSY 202 (459)
T ss_pred CCCEEEECCCcHHHHHHHHHHHHHhc------CCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCccc
Confidence 56899999999999999999999985 789999999999999999998888777777777777777888877666
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcc
Q psy14484 173 NINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTG 252 (430)
Q Consensus 173 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g 252 (430)
+.++. +.+.....+++.+++.+++. +++++||+|| +++++ .+.|+++|+++|+++|++||++||+|||++||||+|
T Consensus 203 ~~~~~-~~~~~~~~~~~~l~~~i~~~-~~vAavIvEP-v~g~g-~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG 278 (459)
T PRK06082 203 RGAFP-DADGSDVHYADYLEYVIEKE-GGIGAFIAEA-VRNTD-VQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTG 278 (459)
T ss_pred ccccC-ChhHHHHHHHHHHHHHHhcC-CCEEEEEECC-ccCCC-CcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc
Confidence 55432 22334445678899988753 5799999999 99885 688999999999999999999999999999999999
Q ss_pred cccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHH
Q psy14484 253 KFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQ 332 (430)
Q Consensus 253 ~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~ 332 (430)
.+|+++++++.||++++||+++||++|+|++++++++++.+.. .+.+ +||++||++++++.++|+.++++++.+
T Consensus 279 ~~fa~e~~gv~PDiv~~gKgl~gG~~P~~av~~~~~i~~~~~~-----~~~~-~T~~gnpl~~aaa~a~L~~l~~~~l~~ 352 (459)
T PRK06082 279 EWFTHQAYGIEPDILCIGKGLGGGLVPIAAMITKDKYNTAAQI-----SLGH-YTHEKSPLGCAAALATIEVIEQEGLLE 352 (459)
T ss_pred hhhHhHhhCCCCCEEEecccccCCCCcceEEEEcHHHHhhccC-----CCCC-CCCCcCHHHHHHHHHHHHHHHhcCHHH
Confidence 9999999999999999999999997799999999998754421 2335 799999999999999999998889999
Q ss_pred HHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCcc---chhHHHHHHHHHHHCCcEEeec-CCEEEEeCCC
Q psy14484 333 RISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQ---IETFSKKFFVAALKNELLLRPI-GNTVYLMPPY 407 (430)
Q Consensus 333 ~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~a~~~~~~l~~~Gv~~~~~-~~~lR~~~~~ 407 (430)
++++++++|+++|+++ .+++.+..+++.|+|+++++. .+... ....+..+.+.++++|+++.+. ++.+||+|++
T Consensus 353 ~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ve~~-~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~i~~~Ppl 431 (459)
T PRK06082 353 KVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELV-TDRHTKERAYDEAEAVLYRCLNNGLSFKVSQGNVIQLSPPL 431 (459)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCeeeeeeccceeEEEEc-cCccccCccHHHHHHHHHHHHhCCCEEEecCCCEEEEeCCC
Confidence 9999999999999998 678888899999999999997 53221 1123567888999999999886 6899999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHhh
Q psy14484 408 ILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 408 ~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
++|++||++++++|++++.++.
T Consensus 432 ~it~~eid~~~~~l~~~l~~~~ 453 (459)
T PRK06082 432 IITREELTQALAILEEAIAKIC 453 (459)
T ss_pred ccCHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998753
No 38
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-62 Score=477.95 Aligned_cols=398 Identities=29% Similarity=0.443 Sum_probs=341.2
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
+.|.++.+++|+ |+||.||++||||.+++|+.++||+||+|.+|++++++++.+.....+.++...+++++|.+..|
T Consensus 35 ~~p~~~~~a~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p 111 (441)
T PRK05769 35 WYPLVIERGEGV---WVEDVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSLTDFYYEPAVELAERLVEIAP 111 (441)
T ss_pred CCCeeEEecceE---EEEeCCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCccCcccCCHHHHHHHHHHHHhCC
Confidence 357888888776 89999999999999999999999999999999999999876654445678889999999999986
Q ss_pred CC-CCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCC-ccchhhhhccCCCeeEeCCC
Q psy14484 92 YK-LGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNI-QSFKEIYTSLLNKTYIITTP 169 (430)
Q Consensus 92 ~~-~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 169 (430)
.+ .++++|++||+||++.|+|+++.++ +|.+|+.+.++|||++.+++++++. +.++..|.+...++..+++|
T Consensus 112 ~~~~~~v~f~~SGsEA~e~AlklAr~~t------gr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~ 185 (441)
T PRK05769 112 GGFEKKVFFTNSGTESNEAAIKIARYHT------GRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYP 185 (441)
T ss_pred CCCCCEEEECCchHHHHHHHHHHHHHHh------CCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCC
Confidence 32 5799999999999999999999986 8899999999999999998888654 34566677777777888888
Q ss_pred CCCCCCCC-CChhHHHHHHHHHHHH-HHHh--CCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccc
Q psy14484 170 DSRNINKG-NSANEIARCAIFDLEI-LLKK--NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIA 245 (430)
Q Consensus 170 ~~~~~~~~-~~~~~~~~~d~~~le~-~l~~--~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~ 245 (430)
+.++.+++ .+.++....+++.+++ ++++ .++++++||+|| +++++|.++|+++|+++|+++|++||+++|+||++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Ep-v~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~ 264 (441)
T PRK05769 186 NPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEP-IQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQ 264 (441)
T ss_pred ccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECc-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh
Confidence 76665543 3333333446777887 4443 256899999999 99999999999999999999999999999999999
Q ss_pred cCCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHH
Q psy14484 246 VGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIF 325 (430)
Q Consensus 246 ~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~ 325 (430)
+||||+|.+++++.+++.||+++|||++++| +|+|++++++++++.+. ..+++||+++|++++++.++|+++
T Consensus 265 tG~gr~G~~~a~~~~gv~pDivt~~K~l~~G-~p~gav~~~~~i~~~~~-------~~~~~T~~g~p~~~aaa~a~L~~l 336 (441)
T PRK05769 265 TGMGRTGKMFAIEHFGVEPDIITLAKAIAGG-LPLGAVIGRAELMFLPP-------GSHANTFGGNPVAAAAALATLEEL 336 (441)
T ss_pred hCCCcccceehhhccCCCCCEEEEcccccCC-cccEEEEEehhhhhcCC-------CCCCCCCCcCHHHHHHHHHHHHHH
Confidence 9999999988888899999999999999999 79999999999875332 247899999999999999999999
Q ss_pred hhcCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCC-ccchhHHHHHHHHHHHCCcEEeecC-CEEE
Q psy14484 326 NKDNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDP-EQIETFSKKFFVAALKNELLLRPIG-NTVY 402 (430)
Q Consensus 326 ~~~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~a~~~~~~l~~~Gv~~~~~~-~~lR 402 (430)
++ ++.+++++++++|++.|+++ .+++.+..+++.|+++.+++. ++. ......+..+.+.|+++|+++.+.+ +.+|
T Consensus 337 ~~-~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~Gil~~~~~~~~lr 414 (441)
T PRK05769 337 EE-GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELV-KDRKEPDPKLRDKVLYEAFKRGLLLLGAGKSAIR 414 (441)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEec-cCCccccHHHHHHHHHHHHhCCcEEecCCCCEEE
Confidence 88 99999999999999999998 567888899999999999997 532 1122345678889999999998765 7899
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 403 LMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 403 ~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
|+|++++|++||++++++|++++.+++
T Consensus 415 ~~p~l~~t~~~id~~~~~l~~~l~~~~ 441 (441)
T PRK05769 415 IIPPLIITEEEADIGLEILEEAIKELL 441 (441)
T ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999998764
No 39
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-62 Score=475.35 Aligned_cols=390 Identities=27% Similarity=0.441 Sum_probs=337.6
Q ss_pred ceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCC
Q psy14484 14 NLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYK 93 (430)
Q Consensus 14 ~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (430)
|.++.+++|. |+||.|||+||||.+++|+.++||+||+|.+|++++++++.+.....+.++...+++++|.+.+|.+
T Consensus 23 p~~i~~~~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~ 99 (425)
T PRK07495 23 QIYADRAENA---EIWDKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCHQVVPYENYVRLAERLNALVPGD 99 (425)
T ss_pred CeeEEeeeec---EEEeCCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCcccCccCCHHHHHHHHHHHHhCCCC
Confidence 7889999887 7999999999999999999999999999999999999987654434567888899999999998744
Q ss_pred -CCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCC-ccchhhhhccCCCeeEeCCCCC
Q psy14484 94 -LGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNI-QSFKEIYTSLLNKTYIITTPDS 171 (430)
Q Consensus 94 -~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 171 (430)
.++++|++||+||++.|+|+++.++ ++.+|+.+.++|||++.+++++++. ..++..+.+...++.++++|..
T Consensus 100 ~~~~v~f~~SGseA~e~AlklAr~~t------gr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (425)
T PRK07495 100 FAKKTIFVTTGAEAVENAVKIARAAT------GRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVE 173 (425)
T ss_pred CCCEEEECCchHHHHHHHHHHHHHhh------CCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcc
Confidence 3699999999999999999999985 7889999999999999988887765 3466667766667778888865
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHh--CCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCC
Q psy14484 172 RNINKGNSANEIARCAIFDLEILLKK--NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG 249 (430)
Q Consensus 172 ~~~~~~~~~~~~~~~d~~~le~~l~~--~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g 249 (430)
+++. + ...+++++++.+.+ .++++++|++|| +++++|.++++++|+++|+++|++||+++|+||+|+|||
T Consensus 174 ~~g~---~----~~~~~~~l~~~~~~~~~~~~iaavi~EP-v~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~g 245 (425)
T PRK07495 174 LHGV---S----VEQSLAALDKLFKADVDPQRVAAIIIEP-VQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFA 245 (425)
T ss_pred cccc---c----HHHHHHHHHHHHHhccCCCceEEEEECC-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCC
Confidence 4421 1 11356778888864 246799999999 999999899999999999999999999999999999999
Q ss_pred CcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcC
Q psy14484 250 RTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDN 329 (430)
Q Consensus 250 ~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~ 329 (430)
|+|.+++++.+++.||+++|||++++| +|+|++++++++++.+.. ..+.+||+++|++++++.++|+++++++
T Consensus 246 r~G~~~a~~~~gv~pDi~tlsK~l~~G-~pigav~~~~~i~~~~~~------~~~~~T~~~~pl~~aaa~a~l~~l~~~~ 318 (425)
T PRK07495 246 RTGKLFAMEHHEVAADLTTMAKGLAGG-FPLAAVTGRAEIMDAPGP------GGLGGTYGGNPLGIAAAHAVLDVIEEED 318 (425)
T ss_pred cCCCceeecccCCCCCEEeehhhhcCC-ccceEEEEcHHHHhccCC------CCcCCCCCCCHHHHHHHHHHHHHHHhch
Confidence 999988888899999999999999999 799999999999887754 2478999999999999999999998889
Q ss_pred HHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCc--cchhHHHHHHHHHHHCCcEEeec---CCEEEE
Q psy14484 330 ILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPE--QIETFSKKFFVAALKNELLLRPI---GNTVYL 403 (430)
Q Consensus 330 ~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~a~~~~~~l~~~Gv~~~~~---~~~lR~ 403 (430)
+.+++++++++++++|+++ ..+|.+..+++.|+|+++++. +... .....+..+.+.++++|+++.+. ++.+||
T Consensus 319 l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~iel~-~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g~~~~~~r~ 397 (425)
T PRK07495 319 LCERANQLGNRLKQRLASLRETVPEIADIRGPGFMNAVEFN-DADSGLPSAEFANRVRLKALEKGLILLTCGVHGNVIRF 397 (425)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCeeeeecCceEEEEEEe-cCCCCCccHHHHHHHHHHHHHCCeEEeecCCCCCEEEE
Confidence 9999999999999999998 667888899999999999997 5321 12234567899999999999764 479999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 404 MPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 404 ~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.|++++|++++++++++|++++.++
T Consensus 398 ~Ppl~it~~~id~~~~~l~~~l~~~ 422 (425)
T PRK07495 398 LAPITIQDDVFAEALDILEASILEA 422 (425)
T ss_pred eCCCccCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999764
No 40
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=4e-62 Score=477.36 Aligned_cols=398 Identities=32% Similarity=0.498 Sum_probs=343.6
Q ss_pred ceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCC
Q psy14484 14 NLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYK 93 (430)
Q Consensus 14 ~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 93 (430)
+.++.+++|. |+||.||++||||.+|+|+.+|||+||+|.+|++++++++.+.....+.++...+++++|++.+|..
T Consensus 26 ~~~~~~~~G~---~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~~~~ 102 (433)
T PRK08117 26 NLPVVKGEGC---YYYGVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGVIYYESILKLAEELAEITPGG 102 (433)
T ss_pred CceEEeeeee---EEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCC
Confidence 3788888777 7999999999999999999999999999999999999987654433467788999999999999656
Q ss_pred CCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCC-ccchhhhhccCCCeeEeCCCCCC
Q psy14484 94 LGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNI-QSFKEIYTSLLNKTYIITTPDSR 172 (430)
Q Consensus 94 ~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 172 (430)
.+.++|++||+|||+.|+|+++.++ ++.+||.++++|||++.++++++.. +.++..+.+...++.++|+|+.+
T Consensus 103 ~~~v~f~~SGseA~e~AlklAr~~t------gr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (433)
T PRK08117 103 LDCFFFSNSGAEAIEGALKLAKHVT------KRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCD 176 (433)
T ss_pred CCEEEEeCcHHHHHHHHHHHHHHhc------CCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccc
Confidence 7899999999999999999999885 7889999999999999998877653 44555566666677788888766
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHh--CCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCC
Q psy14484 173 NINKGNSANEIARCAIFDLEILLKK--NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGR 250 (430)
Q Consensus 173 ~~~~~~~~~~~~~~d~~~le~~l~~--~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~ 250 (430)
+.+.....++...++++++++.+++ .++++++||+|| +++++|.+.|+++|+++|+++|++||++||+||||+||||
T Consensus 177 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Ep-i~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr 255 (433)
T PRK08117 177 RCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEP-VLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGR 255 (433)
T ss_pred cccccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEECC-eeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCc
Confidence 5544333445567789999998875 246899999999 9999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCH
Q psy14484 251 TGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNI 330 (430)
Q Consensus 251 ~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~ 330 (430)
+|.+++++.+++.||++++||++++| +|+|++++++++++.+.. ..+++|++++|++++++.++|+.++++++
T Consensus 256 ~G~~~~~~~~gv~pDi~t~sK~lg~G-~pigav~~~~~i~~~~~~------~~~~~T~~~np~~~aaa~a~L~~l~~~~l 328 (433)
T PRK08117 256 TGEWFAAQTFGVVPDIMTIAKGIASG-LPLSAVVASKELMEQWPL------GSHGTTFGGNPVACAAALATLEVIKEEKL 328 (433)
T ss_pred cccchhHhhcCCCCCEeehhhhccCC-CcceeEEEcHHHHhhccC------CCCCCCCCcCHHHHHHHHHHHHHHHhccH
Confidence 99988888889999999999999999 799999999999887754 34788999999999999999999988899
Q ss_pred HHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCc-cchhHHHHHHHHHHHCCcEEeec---CCEEEEeC
Q psy14484 331 LQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPE-QIETFSKKFFVAALKNELLLRPI---GNTVYLMP 405 (430)
Q Consensus 331 ~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~a~~~~~~l~~~Gv~~~~~---~~~lR~~~ 405 (430)
.+++++++++++++|+++ ..++.+..+++.|+++++++. ++.. .....+..+.+.|+++||++.+. ++.+||+|
T Consensus 329 ~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~-~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~~~~lRl~p 407 (433)
T PRK08117 329 LDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIV-DPDGEPDGDAVEKILDKCLEKGLLFYLCGNAGNVLRMIP 407 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEe-cCCCCcchHHHHHHHHHHHHCCCEEeecCCCCCEEEEeC
Confidence 999999999999999988 567777789999999999997 5321 11223567889999999998764 37999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 406 PYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 406 ~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
++.+|+++|++++++|.+++.++.
T Consensus 408 ~~~~t~~~i~~~~~~l~~~l~~~~ 431 (433)
T PRK08117 408 PLTVTKEEIDEGLDILDEALTEYE 431 (433)
T ss_pred CccCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999998764
No 41
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=4.6e-62 Score=470.28 Aligned_cols=383 Identities=24% Similarity=0.399 Sum_probs=336.8
Q ss_pred CCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhc
Q psy14484 11 SSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLT 90 (430)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 90 (430)
.+.|+++.+++|. |+||.||++||||.+++|+.++||+||+|.+|+.++++++.+... .+.++...+++++|.+..
T Consensus 20 ~~~~~~~~~a~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-~~~~~~~~~la~~L~~~~ 95 (408)
T PRK04612 20 RPRQVVLERGQGS---RVWDDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSN-VFYSAPPLKLAEELVTAS 95 (408)
T ss_pred CCCCceEEEeeeC---EEEECCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhcccccc-ccCCHHHHHHHHHHHhhC
Confidence 4667899999888 799999999999999999999999999999999999988655433 356788889999999987
Q ss_pred CCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCC-CCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC
Q psy14484 91 QYKLGHCFYGSDGASAVEVALKMSFHYWYNKGF-LNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP 169 (430)
Q Consensus 91 ~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~-~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (430)
| ..++++|++||+||++.|+|+++.++..+|. +++.+||.+.++|||++.+++++++.+.++..+.+...++..+++|
T Consensus 96 ~-~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 174 (408)
T PRK04612 96 R-FAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFN 174 (408)
T ss_pred C-CCCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCC
Confidence 6 3479999999999999999999998776775 3577899999999999999999888777777676655555556555
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCC
Q psy14484 170 DSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG 249 (430)
Q Consensus 170 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g 249 (430)
|++.+++++. ++++++|++|| +++++|++.++++|+++|+++|++||+++|+||+|+|+|
T Consensus 175 -----------------d~~~l~~~~~--~~~~aavi~eP-~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~g 234 (408)
T PRK04612 175 -----------------DVEALEAAMA--GGDVAAVMLEP-IQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMG 234 (408)
T ss_pred -----------------CHHHHHHhhC--CCCEEEEEECC-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence 7888998885 46899999999 999999999999999999999999999999999999999
Q ss_pred CcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcC
Q psy14484 250 RTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDN 329 (430)
Q Consensus 250 ~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~ 329 (430)
++|.+++....++.||+++|||++++| +|+|++++++++++.+.. ..+++||+++|++++++.++|+.+++++
T Consensus 235 r~G~~~a~~~~~~~pdi~t~~K~l~~G-~piga~~~~~~~~~~~~~------~~~~~t~~~~p~~~aaa~a~L~~~~~~~ 307 (408)
T PRK04612 235 RTGTLFAHWQEQVTPDIVTLAKALGGG-FPIGAMLAGPKVAETMQF------GAHGTTFGGNPLAAAVARVALRKLASPQ 307 (408)
T ss_pred cCCchhhhhhcCCCCCEEEEcchhcCC-CceEEEEECHHHHhhhcC------CCcCCCCCCCHHHHHHHHHHHHHHHhcc
Confidence 999877777778999999999999999 799999999998877654 3478899999999999999999998899
Q ss_pred HHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-CEEEEeCCC
Q psy14484 330 ILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPY 407 (430)
Q Consensus 330 ~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-~~lR~~~~~ 407 (430)
+.+++++++++++++|+++ ..++.+..+++.|+|+++++. .+.. ..+..+++.|+++|+++.+.+ +.+||.|++
T Consensus 308 l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~-~~~~---~~a~~i~~~l~~~Gvlv~~~g~~~lRl~Ppl 383 (408)
T PRK04612 308 IAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLA-PAHA---GQAGAILDLAAEHGLLLLQAGPDVLRFVPAL 383 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEec-Cchh---hHHHHHHHHHHHCCeEEeeCCCCEEEEcCCc
Confidence 9999999999999999998 567888899999999999987 4211 224678999999999998876 899999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHhh
Q psy14484 408 ILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 408 ~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
.++++||++++++|++++.++.
T Consensus 384 ~it~eeid~~l~~l~~~l~~~~ 405 (408)
T PRK04612 384 NLTDAELADGLARLRLALADYV 405 (408)
T ss_pred cCCHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998753
No 42
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-61 Score=470.63 Aligned_cols=398 Identities=28% Similarity=0.405 Sum_probs=341.0
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
..|.++.+++|. |+||.||++||||.+|+|+.+|||+||+|.+|+++++.++.+.......++...++++.|.+..|
T Consensus 22 ~~p~~~~~a~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p 98 (443)
T PRK08360 22 YYPLVPVKAENA---KVWDIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPIYGFPVEPLLLAEKLIEIAP 98 (443)
T ss_pred cCCceEEeccee---EEEECCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCC
Confidence 458889998877 89999999999999999999999999999999999999876655445567888999999999998
Q ss_pred CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCc-cchhhhhccCCCeeEeCCCC
Q psy14484 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ-SFKEIYTSLLNKTYIITTPD 170 (430)
Q Consensus 92 ~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 170 (430)
...++++|++||+||++.|+|+++.++ +|.+|+.+.++|||++.++.++++.. .++..+.+ ..+..++++|+
T Consensus 99 ~~~~~v~f~~sGsEAve~AlklAr~~t------gr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~-~~~~~~~~~~~ 171 (443)
T PRK08360 99 GDNPKVSFGLSGSDANDGAIKFARAYT------KRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGE-LSDVHYIPYPD 171 (443)
T ss_pred CCCCEEEEcCCHHHHHHHHHHHHHHhc------CCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCC-CCCcEEEeCCc
Confidence 666899999999999999999999986 88999999999999998888877632 34444555 45567778887
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHhC--CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCC
Q psy14484 171 SRNINKGNSANEIARCAIFDLEILLKKN--HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGC 248 (430)
Q Consensus 171 ~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~ 248 (430)
..+.++.....+...++++.+++.+.+. ++++++|++|| +++++|.+.|+++|+++|.++|++||+++|+||+|+||
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP-~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 250 (443)
T PRK08360 172 CYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEP-IQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGL 250 (443)
T ss_pred cccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEEECC-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCC
Confidence 6655443322334445777888888652 46899999999 99999999999999999999999999999999999999
Q ss_pred CCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhc
Q psy14484 249 GRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD 328 (430)
Q Consensus 249 g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~ 328 (430)
+++|.+++++.+++.||++++||++++| +|+|++++++++++.+.. ..+.+|+++++++++++.++|+.++++
T Consensus 251 gr~G~~~a~~~~~~~pDiitlsK~l~~G-~pigav~~~~~i~~~~~~------~~~~~T~~~~p~~~aaa~a~l~~l~~~ 323 (443)
T PRK08360 251 GRTGKWFAIEHFGVEPDIITLGKPLGGG-LPISATIGRAEIMDSLPP------LAHAFTLSGNPVASAAALAVIEEIEEK 323 (443)
T ss_pred CcCccchhhhhcCCCCCEEEecccccCC-ceeEEEEEcHHHHhhhcC------CCCCCCCCcCHHHHHHHHHHHHHHHHc
Confidence 9999887877889999999999999998 799999999999888764 347889999999999999999999888
Q ss_pred CHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCcc---chhHHHHHHHHHHHCCcEEeec-CCEEEE
Q psy14484 329 NILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQ---IETFSKKFFVAALKNELLLRPI-GNTVYL 403 (430)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~a~~~~~~l~~~Gv~~~~~-~~~lR~ 403 (430)
++.+++++++++++++|+++ ..++.+..+++.|+++++++. ++... ....+..+.+.|+++|+++.+. ++.+||
T Consensus 324 ~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~-~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lr~ 402 (443)
T PRK08360 324 NLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLV-KDRETKERAYEEAAKVVWRAWELGLIVTFFSGNVLRI 402 (443)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEe-cCCcccCccHHHHHHHHHHHHHCCeEEeecCCCEEEE
Confidence 99999999999999999988 567888899999999999997 54211 1123567889999999998764 589999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 404 MPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 404 ~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+|++++|+++|++++++|++++.++
T Consensus 403 ~P~l~~t~~~id~~~~~l~~~l~~~ 427 (443)
T PRK08360 403 QPPLTIEKEVLDEGLDILEEAIEDV 427 (443)
T ss_pred eCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999765
No 43
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=1.1e-61 Score=472.00 Aligned_cols=397 Identities=26% Similarity=0.391 Sum_probs=338.5
Q ss_pred CCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhc
Q psy14484 11 SSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLT 90 (430)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 90 (430)
.+.|.++.+++|+ |+||.||++||||.+++|+.++||+||+|.+|++++++++.+.......++...+++++|.+..
T Consensus 13 ~~~p~~~~~a~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~ 89 (420)
T TIGR00700 13 VTLPVFAARAEGA---ILEDVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLNRIA 89 (420)
T ss_pred CCCCeeEEeeeee---EEEeCCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCccccccCChHHHHHHHHHHHhC
Confidence 3468899999888 7999999999999999999999999999999999999987654433466788889999999998
Q ss_pred CC-CCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCc-cchhhhhccCCCeeEeCC
Q psy14484 91 QY-KLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ-SFKEIYTSLLNKTYIITT 168 (430)
Q Consensus 91 ~~-~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 168 (430)
|. ..++++|++||+||++.|+|+++.++ +|.+||.+.++|||++.+++++++.. .++..+.++..+...+++
T Consensus 90 p~~~~~~v~f~~sGseA~e~AlklAr~~t------gr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (420)
T TIGR00700 90 PGSGPKKSVFFNSGAEAVENAVKIARSYT------GRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPL 163 (420)
T ss_pred CCCCCCEEEEeCCcHHHHHHHHHHHHHhc------CCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCC
Confidence 63 35799999999999999999999986 78899999999999999999887653 456666666667777888
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHH--hCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc
Q psy14484 169 PDSRNINKGNSANEIARCAIFDLEILLK--KNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV 246 (430)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~d~~~le~~l~--~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~ 246 (430)
|+.++.........+ ..+++.+++.+. ..++++++||+|| +++++|.++|+++|+++|+++|++||+++|+||||+
T Consensus 164 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~iAavi~Ep-i~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~t 241 (420)
T TIGR00700 164 PYPYRDGLLDKQLST-DGELAAARAIFVIDVGANNVAALVIEP-VQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQT 241 (420)
T ss_pred CccccccccccchhH-HHHHHHHHHHHHhhcCCCcEEEEEECC-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEeccc
Confidence 765554322111121 235788888874 2357899999999 999999999999999999999999999999999999
Q ss_pred CCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh
Q psy14484 247 GCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN 326 (430)
Q Consensus 247 g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~ 326 (430)
||+|+|.+++++.+++.||+++|||++++| +|+|++++++++++.+.. ..+.+|+++++++++++.++|+.++
T Consensus 242 g~gr~g~~~a~~~~~~~pDi~~lsK~l~~G-~pig~v~~~~~i~~~~~~------~~~~~T~~~~pl~~aaa~a~l~~l~ 314 (420)
T TIGR00700 242 GFARTGAMFACEHEGPEPDLITTAKSLADG-LPLSGVTGRAEIMDAPAP------GGLGGTYAGNPLACAAALAVLAIIE 314 (420)
T ss_pred CCcccchhHHHhhcCCCCCEEEeeccccCC-cceEEEEecHHHHhhcCC------CCcCCCCCcCHHHHHHHHHHHHHHH
Confidence 999999888888889999999999999998 799999999999887754 3478999999999999999999988
Q ss_pred hcCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCC--ccchhHHHHHHHHHHHCCcEEeec---CCE
Q psy14484 327 KDNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDP--EQIETFSKKFFVAALKNELLLRPI---GNT 400 (430)
Q Consensus 327 ~~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~a~~~~~~l~~~Gv~~~~~---~~~ 400 (430)
++++.+++++++++++++|+++ ..++.+..+++.|+++++++. +.. .+...++..+.+.|+++||++.|+ +++
T Consensus 315 ~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~-~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f~~~ 393 (420)
T TIGR00700 315 SEGLIERARQIGRLVTDRLTTLKAVDPRIGDVRGLGAMIAVELV-DPGTTEPDAGLAERIATAAHAAGLLLLTCGMFGNI 393 (420)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHhhCCCEEEeeccceEEEEEEe-cCCCCCccHHHHHHHHHHHHHCCeEEeccCCCCCE
Confidence 8899999999999999999988 667777889999999999986 421 112334678888899999999886 479
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 401 VYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 401 lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
+||+|++.+++++|++++++|++++.
T Consensus 394 lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 394 IRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred EEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 99999999999999999999998874
No 44
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=4.2e-62 Score=450.54 Aligned_cols=390 Identities=23% Similarity=0.311 Sum_probs=326.7
Q ss_pred cccccccCCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHH
Q psy14484 4 IVYFKKKSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLS 83 (430)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (430)
.+.|+.....|.++.+++|+ |+||.|||+||||+.+||...|||+||.|++|+++++.++. .++.+++...+++
T Consensus 26 vra~~~v~~~P~fi~~g~Ga---~l~DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~---~fg~Pte~Ei~~A 99 (432)
T COG0001 26 VRAFKSVGGYPIFIERGKGA---YLTDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERGL---SFGAPTELEVELA 99 (432)
T ss_pred ccccCCCCCCCeeEEeccCC---eEEeCCCCEeeehhccCcccccCCCCHHHHHHHHHHHHhcC---CCCCCCHHHHHHH
Confidence 35677777899999999998 89999999999999999999999999999999999999865 3467889999999
Q ss_pred HHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCC--CccchhhhhccCC
Q psy14484 84 EKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTN--IQSFKEIYTSLLN 161 (430)
Q Consensus 84 ~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~--~~~~~~~~~~~~~ 161 (430)
+.+.+++| ..+.|.|+||||||++.|+|+||.++ +|++|+.|+++|||+....+.-.+ ...+.
T Consensus 100 ell~~~~p-~~e~vrfvnSGTEAtmsAiRlARa~T------gR~kIikF~G~YHG~~D~~lv~agsg~~t~g-------- 164 (432)
T COG0001 100 ELLIERVP-SIEKVRFVNSGTEATMSAIRLARAYT------GRDKIIKFEGCYHGHSDSLLVKAGSGAATLG-------- 164 (432)
T ss_pred HHHHHhcC-cccEEEEecchhHHHHHHHHHHHHhh------CCCeEEEEcCCCCCCccHHHhhcCcCcccCC--------
Confidence 99999998 77999999999999999999999997 999999999999999765544322 11000
Q ss_pred CeeEeCCCCCCCCCC--CCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEE
Q psy14484 162 KTYIITTPDSRNINK--GNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHL 239 (430)
Q Consensus 162 ~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~l 239 (430)
.|.....+. .+....+.+||++++++++++.++++++||+|| +.++.|.+.|+++|+++|+++|++||++|
T Consensus 165 ------~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~~IAaVIvEP-v~gn~g~i~p~~~Fl~~Lr~lt~e~G~lL 237 (432)
T COG0001 165 ------SPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGDDIAAVIVEP-VAGNMGVVPPEPGFLEGLRELTEEHGALL 237 (432)
T ss_pred ------CCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCCcEEEEEecc-ccCCCCCCCCCHHHHHHHHHHHHHcCcEE
Confidence 011111111 011112235799999999999888999999999 99999999999999999999999999999
Q ss_pred EEeccccCCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHH
Q psy14484 240 IADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAAL 319 (430)
Q Consensus 240 i~DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~ 319 (430)
|+|||.||| |.....+...++++||+.||+|.+||| +|+|++.+++++++.+.+ .++..+.+|+++||++++|++
T Consensus 238 I~DEViTGF-R~~~gGaq~~~gi~PDlttlGKiIGGG-lP~ga~gGr~eiM~~~~p---~g~vyqaGT~sgnplamaAG~ 312 (432)
T COG0001 238 IFDEVITGF-RVALGGAQGYYGVEPDLTTLGKIIGGG-LPIGAFGGRAEIMEQLAP---LGPVYQAGTLSGNPLAMAAGL 312 (432)
T ss_pred EEecchhhc-ccCCcccccccCcCcchhhhhhhhcCC-cceeeeccHHHHHhhhCC---CCCccccCCCCCcHHHHHHHH
Confidence 999999999 666667888999999999999999999 799999999999998886 557889999999999999999
Q ss_pred HHHHHHhh-cCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCc--------cchhHHHHHHHHHHH
Q psy14484 320 ATLEIFNK-DNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPE--------QIETFSKKFFVAALK 389 (430)
Q Consensus 320 ~~l~~~~~-~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~--------~~~~~a~~~~~~l~~ 389 (430)
++|+.+.+ +..++++.+++++|++.|++. .++.....+...|.++.+.+. .... +..+....+.+.|++
T Consensus 313 atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~-~~~~~n~~da~~sd~~~~~~~~~~~l~ 391 (432)
T COG0001 313 ATLEELMTEEGVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFT-EEGVRNYADAKRSDVERFAKFFHHLLN 391 (432)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEec-CCCCCCHHHHHhhchHHHHHHHHHHHh
Confidence 99998876 568999999999999999887 666555577788899988887 4211 011123456669999
Q ss_pred CCcEEeecC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 390 NELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 390 ~Gv~~~~~~-~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
+||++.|.. +.. .++..||+++|++++++++++++++.
T Consensus 392 ~GV~l~ps~~ea~--flS~ahte~di~~~~~a~~~~~~~~~ 430 (432)
T COG0001 392 RGVYLAPSQFEAG--FLSTAHTEEDIDRTLEAADEAFKELA 430 (432)
T ss_pred CCcccCCccccce--eeecccCHHHHHHHHHHHHHHHHHhh
Confidence 999999886 332 34778999999999999999998764
No 45
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=100.00 E-value=3.1e-61 Score=472.27 Aligned_cols=398 Identities=27% Similarity=0.443 Sum_probs=338.3
Q ss_pred CceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCC
Q psy14484 13 NNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQY 92 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 92 (430)
.|.++.+++|+ |+||.|||+||||.+++|+.++||+||+|.+|++++++++.+.....+.++...+++++|.+.+|.
T Consensus 36 ~~~~~~~~~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~ 112 (451)
T PRK06918 36 IPTFAQSANGA---LVTDVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGFNVMMYEPYIELAEKLAALAPG 112 (451)
T ss_pred CCceEEecccc---EEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCccccccccHHHHHHHHHHHHhCCC
Confidence 46888998887 899999999999999999999999999999999999998765544455688899999999999974
Q ss_pred CC-CeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCC-ccchhhhhccCCCeeEeCCCC
Q psy14484 93 KL-GHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNI-QSFKEIYTSLLNKTYIITTPD 170 (430)
Q Consensus 93 ~~-~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 170 (430)
.. ++++|++||+||++.|+|+++.++ +|.+||.+.++|||++.+++++++. +.++..+.++..++.++|+|+
T Consensus 113 ~~~~~v~f~~sGseA~e~AlklAr~~t------gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (451)
T PRK06918 113 SFDKKVLFLNSGAEAVENAVKIARKYT------KRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPY 186 (451)
T ss_pred CCCCEEEEcCCcHHHHHHHHHHHHHHh------CCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCc
Confidence 44 699999999999999999999986 8899999999999999999988764 345666677666777788876
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHh--CCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCC
Q psy14484 171 SRNINKGNSANEIARCAIFDLEILLKK--NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGC 248 (430)
Q Consensus 171 ~~~~~~~~~~~~~~~~d~~~le~~l~~--~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~ 248 (430)
.++.+.+...+.+....++.+++.+.. .++++++||+|| +++++|.++|+++|+++|+++|++||+++|+||+|+||
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EP-i~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~ 265 (451)
T PRK06918 187 EYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEP-VQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGF 265 (451)
T ss_pred cccccccCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECc-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCc
Confidence 655543332233333335556655532 256899999999 99999999999999999999999999999999999999
Q ss_pred CCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhc
Q psy14484 249 GRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD 328 (430)
Q Consensus 249 g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~ 328 (430)
+|+|.+++++.+++.||+++|||++++| +|+|++++++++++.+.. ..+.+|+++++++++++.++|+.++++
T Consensus 266 gr~g~~~a~~~~~v~pDi~t~sK~l~~G-~pig~v~~~~~i~~~~~~------~~~~~T~~g~~l~~aaa~a~l~~i~~~ 338 (451)
T PRK06918 266 ARTGKYFAIEHFDVVPDLITVSKSLGAG-VPISGVIGRKEIMDESAP------GELGGTYAGSPLGCAAALAVLDIIEKE 338 (451)
T ss_pred CccCceehhHhcCCCCCEEeeehhhcCC-CccEEEEEcHHHHhccCC------CCcCcCCCcCHHHHHHHHHHHHHHHHC
Confidence 9999888888889999999999999998 799999999999887754 347899999999999999999999888
Q ss_pred CHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCC---ccchhHHHHHHHHHHHCCcEEeecC---CEE
Q psy14484 329 NILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDP---EQIETFSKKFFVAALKNELLLRPIG---NTV 401 (430)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~a~~~~~~l~~~Gv~~~~~~---~~l 401 (430)
++.+++++++++++++|+++ ..++.+..+++.|.++.+++. .+. .....++..+.+.|+++||++.+++ +.+
T Consensus 339 ~~~~~~~~~g~~l~~~l~~l~~~~~~~~~vrg~G~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~~~~l 417 (451)
T PRK06918 339 NLNDRAIELGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFELV-QDRKTKEPDKTLTANICKEANKRGLLLLSAGTYGNVI 417 (451)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhCCCceeeccceeEEEEEEc-cCCCcCCCcHHHHHHHHHHHHHCCeEEeecCCCCCEE
Confidence 99999999999999999988 567777788999999999885 332 1122346788899999999998864 799
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 402 YLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 402 R~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
||+|++.+++++|++++++|++++.++
T Consensus 418 rl~p~l~~t~~~id~~l~~l~~~l~~~ 444 (451)
T PRK06918 418 RVLMPLVITDEQLEEGLTIIEESLQAC 444 (451)
T ss_pred EEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999865
No 46
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-61 Score=468.88 Aligned_cols=388 Identities=26% Similarity=0.431 Sum_probs=334.4
Q ss_pred ceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCC-
Q psy14484 14 NLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQY- 92 (430)
Q Consensus 14 ~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~- 92 (430)
|.++.+++|. |+||.||++||||.+++|+.++||+||+|.+|++++++++.+.......++...++++.|.+..|.
T Consensus 23 p~~~~~~~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~ 99 (421)
T PRK06777 23 DFYAERAENA---TLWDVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQIVPYASYVTLAERINALAPID 99 (421)
T ss_pred CeeEEeeecC---EEEeCCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcccccccccCChHHHHHHHHHHHhCCCC
Confidence 7899999888 799999999999999999999999999999999999998765544345678889999999998863
Q ss_pred CCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCC-ccchhhhhccCCCeeEeCCCCC
Q psy14484 93 KLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNI-QSFKEIYTSLLNKTYIITTPDS 171 (430)
Q Consensus 93 ~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 171 (430)
+.++++|++||+||++.|+|+++.++ +|.+||.+.++|||++.+++++++. ..++..+.++...+.++++|+.
T Consensus 100 ~~~~~~f~~sGseA~e~AlklAr~~t------gr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~ 173 (421)
T PRK06777 100 GPAKTAFFTTGAEAVENAVKIARAYT------GRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNE 173 (421)
T ss_pred CCceEEEeCCcHHHHHHHHHHHHHhh------CCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcc
Confidence 46799999999999999999999986 8889999999999999999988765 3456666666666667777753
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHh--CCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCC
Q psy14484 172 RNINKGNSANEIARCAIFDLEILLKK--NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG 249 (430)
Q Consensus 172 ~~~~~~~~~~~~~~~d~~~le~~l~~--~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g 249 (430)
.... . ...+++.+++.+.+ .++++++|++|| +++++|..+++++|+++|+++|++||+++|+||||+||+
T Consensus 174 ~~~~---~----~~~~~~~l~~~~~~~~~~~~iaavi~Ep-v~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~g 245 (421)
T PRK06777 174 LHGV---S----VEEALSSVERLFKADIAPDQVAAILLEP-IQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFA 245 (421)
T ss_pred ccCc---C----HHHHHHHHHHHHHhccCCCceEEEEECC-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCc
Confidence 3211 0 12367888888864 357899999999 999999999999999999999999999999999999999
Q ss_pred CcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcC
Q psy14484 250 RTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDN 329 (430)
Q Consensus 250 ~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~ 329 (430)
|+|.+++++.+++.||++++||++++| +|+|++++++++++.+.. ..+.+|+++++++++++.++|+.+++++
T Consensus 246 r~g~~~~~~~~~~~pDiv~~sK~l~~G-~pigav~~~~~i~~~~~~------~~~~~T~~~~p~~~aaa~a~L~~~~~~~ 318 (421)
T PRK06777 246 RTGKLFAMEYYDVKPDLITMAKSLGGG-MPISAVVGRAEVMDAPAP------GGLGGTYAGNPLAVAAALAVLDVIAEEK 318 (421)
T ss_pred cCCchhhhhhcCCCCCEEeeehhhcCC-CceEEEEEcHHHHhccCC------CCCCCCCCcCHHHHHHHHHHHHHHHhcc
Confidence 999888888889999999999999988 799999999999887764 2477899999999999999999988889
Q ss_pred HHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCC--ccchhHHHHHHHHHHHCCcEEeecC---CEEEE
Q psy14484 330 ILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDP--EQIETFSKKFFVAALKNELLLRPIG---NTVYL 403 (430)
Q Consensus 330 ~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~a~~~~~~l~~~Gv~~~~~~---~~lR~ 403 (430)
+.+++++++++++++|+++ ..++.+..+++.|+|+.+++. ... ....+++..+.+.++++||++.+++ +++||
T Consensus 319 l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~-~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~g~~lr~ 397 (421)
T PRK06777 319 LCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMVAVEFN-DPQTGKPSPEFTRQYQRQALEEGLLLLSCGVHGNVIRF 397 (421)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeEEecCceEEEEEEEe-cCccCCccHHHHHHHHHHHHhCCeEEeecCCCCCEEEE
Confidence 9999999999999999998 567778889999999999886 421 1123456778888899999998863 79999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 404 MPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 404 ~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
.|+++++++++++++++|++++.
T Consensus 398 ~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 398 LYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred eCCCCCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999998874
No 47
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=100.00 E-value=1.8e-61 Score=467.92 Aligned_cols=381 Identities=28% Similarity=0.448 Sum_probs=334.2
Q ss_pred cCCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhh
Q psy14484 10 KSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSL 89 (430)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 89 (430)
+.+.|.++.+++|. |+||.||++||||.+++|+.+|||+||+|.+|+.++++++.+... .+.++...+++++|++.
T Consensus 14 ~~~~~~~~~~~~G~---~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~la~~L~~~ 89 (397)
T TIGR03246 14 YAPAPFIPVRGEGS---RVWDQQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGN-GYTNEPVLRLAKKLVDA 89 (397)
T ss_pred cCCCCceEEEeecC---EEEeCCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccccC-ccCCHHHHHHHHHHHhh
Confidence 34678999999888 799999999999999999999999999999999999987543322 45678889999999998
Q ss_pred cCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC
Q psy14484 90 TQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP 169 (430)
Q Consensus 90 ~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (430)
.+ .++++|++||+|||+.|+++++.++..++.+++.+||.++.+|||++..++++++.+.++..+.+...+...++++
T Consensus 90 ~~--~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (397)
T TIGR03246 90 TF--ADKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYN 167 (397)
T ss_pred CC--CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCC
Confidence 74 5799999999999999999999987666556788999999999999998888888766666666666666666554
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCC
Q psy14484 170 DSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG 249 (430)
Q Consensus 170 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g 249 (430)
|++++++.+. +++++|++|| +++++|..+|+++|+++|+++|++||+++|+||+|+|+|
T Consensus 168 -----------------d~~~l~~~l~---~~~aavi~Ep-i~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~G 226 (397)
T TIGR03246 168 -----------------DLAAAKALIS---DKTCAVIVEP-IQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVG 226 (397)
T ss_pred -----------------CHHHHHHHhc---cCeEEEEEec-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCC
Confidence 7899999885 5799999999 999999999999999999999999999999999999999
Q ss_pred CcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcC
Q psy14484 250 RTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDN 329 (430)
Q Consensus 250 ~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~ 329 (430)
|+|.+++.+.+++.||++++||+++|| +|+|++++++++++.+.. ..+++||+++|++++++.++|+.+++++
T Consensus 227 r~G~~~a~~~~gv~pDi~t~~K~lggG-~pigav~~~~~i~~~~~~------~~~~~t~~~~p~~~aaa~a~l~~~~~~~ 299 (397)
T TIGR03246 227 RTGELYAYMHYGVTPDILTSAKALGGG-FPIGAMLTTTEIAAHLKV------GTHGTTYGGNPLACAVAGKVLDLVNTPE 299 (397)
T ss_pred ccccchhhhhcCCCCCEEEeehhhhCC-cceeEEEEcHHHHHhccC------CCcCCCCCCCHHHHHHHHHHHHHHhhcc
Confidence 999988888899999999999999988 799999999999887764 3477899999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-CEEEEeCCC
Q psy14484 330 ILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPY 407 (430)
Q Consensus 330 ~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-~~lR~~~~~ 407 (430)
+.+++++++++++++|+++ ..++.+..+++.|.++.+++. +.. ...+..+++.|+++|+++.+.+ +.+||+|++
T Consensus 300 l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~-~~~---~~~~~~~~~~l~~~Gv~~~~~g~~~lR~~p~~ 375 (397)
T TIGR03246 300 LLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLT-EAY---QGKAKQFVNAAAEEGVIALIAGPNVVRFAPSL 375 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEEEEEEc-Cch---hhHHHHHHHHHHHCCeEEeecCCCEEEEeCCC
Confidence 9999999999999999988 556777788999999999886 421 1125689999999999998765 799999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHh
Q psy14484 408 ILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 408 ~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.+|+++|++++++|++++.++
T Consensus 376 ~~t~~~i~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 376 VISDDDIDEGLARFERAIEQV 396 (397)
T ss_pred CCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999875
No 48
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=100.00 E-value=5.1e-61 Score=466.28 Aligned_cols=389 Identities=26% Similarity=0.397 Sum_probs=335.8
Q ss_pred CceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCC
Q psy14484 13 NNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQY 92 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 92 (430)
.|.++.+++|. |+||.||++||||.+++|+.++||+||+|.+|++++++++.+.......++...+++++|.+..|.
T Consensus 22 ~~~~~~~a~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~ 98 (421)
T PRK09792 22 CNFFAQSAENA---TLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPV 98 (421)
T ss_pred CCeeEEecccc---EEEeCCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHHhCCC
Confidence 36888999888 799999999999999999999999999999999999998765544446788889999999998863
Q ss_pred -CCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCC-ccchhhhhccCCCeeEeCCCC
Q psy14484 93 -KLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNI-QSFKEIYTSLLNKTYIITTPD 170 (430)
Q Consensus 93 -~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 170 (430)
+.++++|++||+||++.|+|+++.++ ++.+||.+.++|||++.+++++++. +.++..+.++...+..+++|.
T Consensus 99 ~~~~~~~f~~sGseA~e~AlklAr~~t------gr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~ 172 (421)
T PRK09792 99 SGQAKTAFFTTGAEAVENAVKIARAHT------GRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPS 172 (421)
T ss_pred CCCceEEEeCChHHHHHHHHHHHHHhc------CCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCc
Confidence 34799999999999999999999875 7889999999999999999888764 346666666656667777775
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHhC--CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCC
Q psy14484 171 SRNINKGNSANEIARCAIFDLEILLKKN--HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGC 248 (430)
Q Consensus 171 ~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~ 248 (430)
..+.. ...++++.+++.+++. ++++++|++|| +++++|..+++++|+++|+++|++||+++|+||+++||
T Consensus 173 ~~~~~-------~~~~~~~~l~~~~~~~~~~~~iaavi~EP-vq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~ 244 (421)
T PRK09792 173 DLHGI-------STQDSLDAIERLFKSDIEAKQVAAIIFEP-VQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGF 244 (421)
T ss_pred ccccc-------cHHHHHHHHHHHHHhccCCCceEEEEEcc-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCC
Confidence 44321 1235789999998752 46899999999 89999999999999999999999999999999999999
Q ss_pred CCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhc
Q psy14484 249 GRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD 328 (430)
Q Consensus 249 g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~ 328 (430)
+|+|.+++++.+++.||+++|||++++| +|+|++++++++++.+.. ..+++||++||++++++.+++++++++
T Consensus 245 gr~G~~~a~~~~~~~pDi~t~gK~l~~G-~pigav~~~~~i~~~~~~------~~~~~T~~gnpl~~aaa~a~l~~l~~~ 317 (421)
T PRK09792 245 ARTGKLFAMDHYADKPDLMTMAKSLAGG-MPLSGVVGNANIMDAPAP------GGLGGTYAGNPLAVAAAHAVLNIIDKE 317 (421)
T ss_pred CCCCchhHHHhcCCCCcEEEeehhhcCC-CceEEEEEcHHHHhccCC------CCcCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 9999988888889999999999999999 799999999999887754 247899999999999999999999888
Q ss_pred CHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCc--cchhHHHHHHHHHHHCCcEEeec---CCEEE
Q psy14484 329 NILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPE--QIETFSKKFFVAALKNELLLRPI---GNTVY 402 (430)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~a~~~~~~l~~~Gv~~~~~---~~~lR 402 (430)
++.++++++++++++.|+++ ..+|.+..++|.|+++++++. ++.. .....+..+++.|+++|+++.+. ++.+|
T Consensus 318 ~~~~~~~~~g~~l~~~l~~l~~~~p~v~~vrG~Gl~~~ie~~-~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~g~~~~~ir 396 (421)
T PRK09792 318 SLCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFN-DPQTGEPSAAIAQKIQQRALAQGLLLLTCGAYGNVIR 396 (421)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCcceecccceEEEEEec-CCccCCcchHHHHHHHHHHHHCCcEEeecCCCCCEEE
Confidence 89999999999999999998 668888899999999999997 5311 11123578999999999998754 47999
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 403 LMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 403 ~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
|.|+++++++++++++++|++++.
T Consensus 397 l~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 397 FLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred EeCCCcCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999999875
No 49
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=100.00 E-value=4.6e-61 Score=465.30 Aligned_cols=383 Identities=28% Similarity=0.431 Sum_probs=327.4
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhc-
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLT- 90 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~- 90 (430)
+.|.++.+++|. |+||.||++||||.+++|+.++||+||+|.+|+++++++..+.......++...+++++|.+..
T Consensus 16 ~~p~~~~~~~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~ 92 (412)
T TIGR02407 16 SFPTVFEKAKGS---TLWDEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHSLDMATEAKREFLETFNEIIL 92 (412)
T ss_pred CCCceEEecccC---EEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceeccccCcHHHHHHHHHHHHhcc
Confidence 468899999888 7999999999999999999999999999999999999875444333456788899999999875
Q ss_pred -CCCCC-eEEE-cCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeC
Q psy14484 91 -QYKLG-HCFY-GSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIIT 167 (430)
Q Consensus 91 -~~~~~-~v~~-~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (430)
|.+.. ++.| ++||+||++.|+|+++.++ +|++||.++++|||++.+++++++.+.++..+.++...+.++|
T Consensus 93 ~~~~~~~~~~f~~~sGseA~e~AlklAr~~t------gr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p 166 (412)
T TIGR02407 93 KPRGLDYKVQFPGPTGTNAVESALKLARKVT------GRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMP 166 (412)
T ss_pred CccCCCceEEEeCCCchHHHHHHHHHHhhhc------CCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECC
Confidence 22232 5666 5899999999999999885 7889999999999999999999887777777776666666777
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHhCC---CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecc
Q psy14484 168 TPDSRNINKGNSANEIARCAIFDLEILLKKNH---NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEI 244 (430)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~---~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv 244 (430)
+|+.... ..++++.+++.+.++. +++++|++|| +++++|.++|+++|+++|+++|++||++||+|||
T Consensus 167 ~~~~~~~---------~~~~~~~l~~~~~~~~~~~~~~aavi~Ep-i~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV 236 (412)
T TIGR02407 167 YDGYLGG---------DVDTIAYFEKLLEDSSSGVDLPAAVILET-VQGEGGINVASDEWLQRLEKLCRRHDILLIVDDI 236 (412)
T ss_pred CCCcccc---------chhHHHHHHHHHHhccCCCCceEEEEecc-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEech
Confidence 6642211 1247888999997652 5789999999 9999999999999999999999999999999999
Q ss_pred ccCCCCcccccccccCCCCCceeeeecccCC-CccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHH
Q psy14484 245 AVGCGRTGKFFACEHAEIWPDFLCLSKGITG-GYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLE 323 (430)
Q Consensus 245 ~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~g-G~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~ 323 (430)
|+||||+|.+|+++.+++.||++++||++++ | +|+|++++++++ +.+.. ..+++||++|+++++++.++|+
T Consensus 237 ~tG~GRtG~~~a~~~~~v~PDi~~~~K~lg~~G-~pigav~~~~~~-~~~~~------~~~~~T~~gnpl~~aaa~a~l~ 308 (412)
T TIGR02407 237 QAGCGRTGTFFSFEPAGIEPDIVCLSKSISGYG-LPLALTLIKPEL-DVWKP------GEHNGTFRGNNLAFVTATAALE 308 (412)
T ss_pred hhCCCccchhHHhcccCCCCCEEEechhccCCc-cceeEEEEchhh-hccCC------CccCCCCCccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 7 799999999886 54432 3588999999999999999999
Q ss_pred H-HhhcCHHHHHHHHHHHHHHHHHch-hcCC-CeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC--
Q psy14484 324 I-FNKDNILQRISQDMKKITKALTSL-ITHP-KIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-- 398 (430)
Q Consensus 324 ~-~~~~~~~~~~~~~~~~l~~~l~~l-~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-- 398 (430)
. ++++++.+++++++++++++|+.+ ..++ .+..+++.|+++++++. +. ..+..+.+.|+++||++.+.+
T Consensus 309 ~~i~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~l~-~~-----~~~~~~~~~~~~~Gv~v~~~~~~ 382 (412)
T TIGR02407 309 YYWSDDAFEKAVQRKSEIIQERLDRIVAEYPELIKQVRGRGLMQGIECG-DG-----DLAGKIAKAAFENGLIIETSGPN 382 (412)
T ss_pred HHhcccHHHHHHHHHHHHHHHHHHHHHhhCCCceEeeecceeEEEEEec-Ch-----HHHHHHHHHHHHCCCEEeccCCC
Confidence 5 777889999999999999999988 5666 46688999999999997 42 224679999999999997653
Q ss_pred -CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 399 -NTVYLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 399 -~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
+.+||+|++++|++|+++++++|++++++
T Consensus 383 ~~~lr~~p~l~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 383 DEVIKLLPPLTIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHhC
Confidence 78999999999999999999999999864
No 50
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=100.00 E-value=5.2e-61 Score=454.07 Aligned_cols=357 Identities=28% Similarity=0.485 Sum_probs=316.7
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
..|..+.+++|+ |+||.||++||||.+++|+.++||+||+|.+|+++++++..+... .+.++...+++++|++..
T Consensus 5 ~~~~~~~~~~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~-~~~~~~~~~la~~l~~~~- 79 (364)
T PRK04013 5 RKRLRLVRGEGI---YVWDSQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGP-MFEHEEKEEMLEELSKWV- 79 (364)
T ss_pred CCCccEEEeecC---EEEECCCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCccC-CcCCHHHHHHHHHHHhhc-
Confidence 467888999888 799999999999999999999999999999999999998755433 567889999999999987
Q ss_pred CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC
Q psy14484 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS 171 (430)
Q Consensus 92 ~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (430)
+.++++|++||+||++.|+|+++.++ ++++||+++.+|||++.+++++++.+.++..+.+...++.+++++
T Consensus 80 -~~~~v~~~~SGseA~e~Alklar~~~------gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~-- 150 (364)
T PRK04013 80 -NYEYVYMGNSGTEAVEAALKFARLYT------GRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFN-- 150 (364)
T ss_pred -CCCEEEEeCchHHHHHHHHHHHHHHh------CCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCC--
Confidence 56799999999999999999999885 788999999999999999999888877777777777777666665
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCc
Q psy14484 172 RNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRT 251 (430)
Q Consensus 172 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~ 251 (430)
|++++++.+. +++++|++|| +++++|..+|+++|+++|+++|++||+++|+||+++|+ |+
T Consensus 151 ---------------d~~~l~~~i~---~~~aAvivEp-i~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-Rt 210 (364)
T PRK04013 151 ---------------DVEAAKEAIT---KETAAVIFEP-IQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RT 210 (364)
T ss_pred ---------------CHHHHHHHhc---CCcEEEEEcC-CcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CC
Confidence 6788888885 5899999999 99999999999999999999999999999999999999 99
Q ss_pred ccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHH
Q psy14484 252 GKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNIL 331 (430)
Q Consensus 252 g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~ 331 (430)
|++|+++.+++.||++++||+++|| +|+|+++.++++. . ..|++||++||++|+++.++|++++++++.
T Consensus 211 G~~~a~~~~gv~PDiv~~gK~lggG-~P~~a~~~~~~~~----~------~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~ 279 (364)
T PRK04013 211 GKFLAIEHYKVEPDIVTMGKGIGNG-VPVSLTLTNFDVE----R------GKHGSTFGGNPLACKAVAVTLRILRRERLV 279 (364)
T ss_pred CchhHHHhcCCCCCEEEecccccCC-ceeEEEEeccccc----C------CCcCCCCCcCHHHHHHHHHHHHHHHhccHH
Confidence 9999999999999999999999999 7999999987751 1 248899999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-CEEEEeCCCCCC
Q psy14484 332 QRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILN 410 (430)
Q Consensus 332 ~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-~~lR~~~~~~~t 410 (430)
+++++. |+++. .+.+.+++|.|+|+++++. .. +..+.+.++++|+++.+.+ +++||.|++++|
T Consensus 280 ~~~~~~-------l~~l~-~~~v~~vRG~Gl~~gve~~-~~-------~~~i~~~~~~~Gll~~~~g~~vlr~~Ppl~it 343 (364)
T PRK04013 280 EKAGEK-------FIEIK-GERVVTTRGRGLMIGIVLK-KP-------VGKYVEELQNRGYLVHTAGQRVIRLLPPLIIS 343 (364)
T ss_pred HHHHHH-------HHHhc-cCcceeeeeCcEEEEEEeC-Cc-------HHHHHHHHHhCCcEEeeCCCCEEEEeCCcccC
Confidence 887764 23332 2567899999999999997 42 3568899999999998876 899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q psy14484 411 KNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 411 ~e~i~~~~~~l~~~l~~~~ 429 (430)
++|+++++++|++++++++
T Consensus 344 ~~~i~~~~~~l~~~l~~~~ 362 (364)
T PRK04013 344 KDTMEEAKSAIEGVINDIL 362 (364)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999886
No 51
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=100.00 E-value=2.2e-60 Score=461.72 Aligned_cols=396 Identities=37% Similarity=0.691 Sum_probs=338.2
Q ss_pred eeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCC
Q psy14484 15 LVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKL 94 (430)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 94 (430)
..+.+++|. |+||.||++||||.+++|+.+|||+||+|.++++++++++.+.......++...+++++|.+.+|.+.
T Consensus 29 ~~~~~a~G~---~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~ 105 (427)
T TIGR00508 29 YPVESADGV---ELTLDDGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMTPNAL 105 (427)
T ss_pred ceEEeeeee---EEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCC
Confidence 456777666 89999999999999999999999999999999999999876544445677888999999999988677
Q ss_pred CeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCc-cchhhhhccCCCeeEeCCCCCCC
Q psy14484 95 GHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ-SFKEIYTSLLNKTYIITTPDSRN 173 (430)
Q Consensus 95 ~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 173 (430)
++++|++||+||++.|+|+++.++..+|.+++.+||++.++|||.+.++.++++.. .++..+.+...+...++.|....
T Consensus 106 ~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 185 (427)
T TIGR00508 106 DCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRF 185 (427)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccc
Confidence 89999999999999999999998877777788999999999999999888887642 24444444444444555553211
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEcccc-ccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcc
Q psy14484 174 INKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLV-QCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTG 252 (430)
Q Consensus 174 ~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v-~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g 252 (430)
. ..+..+|++++++.+.++++++++||+|| + ++++|...++.+|+++|+++|++||+++|+|||++|+||+|
T Consensus 186 ~------~~~~~~~~~~l~~~l~~~~~~vaavivEP-v~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G 258 (427)
T TIGR00508 186 D------EEWNEEAITPLAKLMELHSDEIAAVILEP-IVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTG 258 (427)
T ss_pred c------chhHHHHHHHHHHHHHhcCCcEEEEEEec-hhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC
Confidence 0 12233578899999987667899999999 7 99999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHH
Q psy14484 253 KFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQ 332 (430)
Q Consensus 253 ~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~ 332 (430)
.+|+.+++++.||++++||+++||++|++++++++++++.+.. .....+.+++||.++|++++++.++|+.++++++.+
T Consensus 259 ~~~~~~~~~v~pDi~~~gK~l~gG~~p~~a~~~~~~~~~~~~~-~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~~~~ 337 (427)
T TIGR00508 259 KLFACEHAGVVPDILCVGKALTGGYMTLSATVTTDKVAQTISS-GEAGCFMHGPTFMGNPLACAVAEASLAILLEGEWQK 337 (427)
T ss_pred ccchhhhcCCCCCEEEechhhhcCcccceEEEEcHHHHHHHhc-CCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHH
Confidence 9889988999999999999999997799999999999888864 112345688999999999999999999998889999
Q ss_pred HHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecCCEEEEeCCCCCCHH
Q psy14484 333 RISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKN 412 (430)
Q Consensus 333 ~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~~~lR~~~~~~~t~e 412 (430)
++++++++|+++|+++...+.+..+++.|.++.+++. +... +..+++.|+++||++.+.++.+|++|++.+|++
T Consensus 338 ~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~-~~~~-----~~~~~~~l~~~Gv~~~~~~~~l~~~ppl~~t~~ 411 (427)
T TIGR00508 338 QVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMY-KPVN-----VEELQKKFVEQGVWIRPFGKLIYVMPPYIITTE 411 (427)
T ss_pred HHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEEC-CccC-----HHHHHHHHHHCCeEEEecCCEEEEECCCCCCHH
Confidence 9999999999999998555666789999999999987 4311 367899999999999988889999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy14484 413 EIQHMTSAIFQTFNE 427 (430)
Q Consensus 413 ~i~~~~~~l~~~l~~ 427 (430)
||++++++|++++++
T Consensus 412 ~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 412 QLQKLTAALIEALHE 426 (427)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999999875
No 52
>KOG1401|consensus
Probab=100.00 E-value=5.9e-61 Score=431.72 Aligned_cols=389 Identities=31% Similarity=0.445 Sum_probs=328.3
Q ss_pred cccccCCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHH
Q psy14484 6 YFKKKSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEK 85 (430)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (430)
....+...|.++.+++++ .++|.+|++||||+++||+..+||+||++.+++.+++.++.|.....+..+ ..++++.
T Consensus 31 ~~~t~a~~pv~~~~gkg~---kl~D~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~~~~t~e-av~l~~~ 106 (433)
T KOG1401|consen 31 IVSTYARYPVVIESGKGS---KLFDPDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSNGYFTLE-AVELEEV 106 (433)
T ss_pred EeeecCCCceeeecceee---eeecCCcceeeeeccceeccccCCCCHHHHHHHHHHHhhheeccCccccHH-HHHHHHH
Confidence 456778899999999888 699999999999999999999999999999999999999988876666666 7788888
Q ss_pred HHhhcC-CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCee
Q psy14484 86 LSSLTQ-YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTY 164 (430)
Q Consensus 86 l~~~~~-~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (430)
|.+..+ ...++|+|++||||||+.|+|+++..+..+....+.++|.|.++|||.+.+++++.++..|+.++.|..+++.
T Consensus 107 l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~ 186 (433)
T KOG1401|consen 107 LSAVLGKGSAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVV 186 (433)
T ss_pred HHhcccCCCccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCcee
Confidence 888773 3678999999999999999999998765544334467999999999999999999998888888887766666
Q ss_pred EeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecc
Q psy14484 165 IITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEI 244 (430)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv 244 (430)
...+ ||..++++.++.+.+.+++||+|| ++++||.++++++|+..|+++|+++|++||.|||
T Consensus 187 ~~~y-----------------nd~t~l~k~~~~h~~~IaAVIvEP-iqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV 248 (433)
T KOG1401|consen 187 TAEY-----------------NDSTALEKLFESHKGEIAAVIVEP-IQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEV 248 (433)
T ss_pred eccc-----------------CCHHHHHHHHHhCCCceEEEEEec-ccCCCCcccCCHHHHHHHHHHHhhcCceEEeehh
Confidence 5544 389999999999877899999999 9999999999999999999999999999999999
Q ss_pred ccCCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHH
Q psy14484 245 AVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEI 324 (430)
Q Consensus 245 ~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~ 324 (430)
|+||+|+|..|+.+.++++|||.|++|.|+|| +|+|++++++++++.+.+ ..++.|++||++||++|.++..+|+.
T Consensus 249 ~tG~gR~g~~~a~e~~~~~PDI~t~aK~L~gG-lPigA~~v~~kV~~~i~~---~~~l~hg~Tf~gnpLacsa~~~~l~~ 324 (433)
T KOG1401|consen 249 QTGLGRLGYGWAQEYFGVTPDITTVAKPLGGG-LPIGATGVRDKVAEMISP---GDHLYHGGTFSGNPLACSAGIKVLDE 324 (433)
T ss_pred hhCccccchHHHHHHhCcCCcceeehhhccCC-ceeEEEeehHHHHhhcCC---CCccccCcccCCChhhhhHHHHHHHH
Confidence 99999999999999999999999999999999 899999999999999987 33488999999999999999999999
Q ss_pred HhhcCHHHHHHHHHHHHHHHHHch-hcCCC-eeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-----
Q psy14484 325 FNKDNILQRISQDMKKITKALTSL-ITHPK-IINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI----- 397 (430)
Q Consensus 325 ~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~----- 397 (430)
+.++++++++....+.|++.+.+. ...+. +....++|+++++.+. ... ..+.+...+.|.++.+.
T Consensus 325 l~~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~-~p~-------~~~~d~~~~~~ll~~~~~~~~~ 396 (433)
T KOG1401|consen 325 LKDPETLKNVSKIGKELRKLLDEYLKKTPNSICGGVGRGLVIGFEFE-GPV-------YKFADAAREQGLLILTLGKGLL 396 (433)
T ss_pred HcCHHHHHHHHHHHHHHHHHHHHHhccCCCceeeeeeeEEEEEEEEe-ech-------hhhhhhhhhhhHHHHHHhcccc
Confidence 999999999999999999999776 55554 3344889999998876 321 11222222222222221
Q ss_pred CCEEEEeC----CCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 398 GNTVYLMP----PYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 398 ~~~lR~~~----~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
...+|+.| ...+++|.+++.++++.+.+.++
T Consensus 397 ~~gv~i~P~~~l~~~~~~E~i~~~l~i~~~~l~~~ 431 (433)
T KOG1401|consen 397 EEGVRIAPIYLLTVEHTPEVIQRLLTILEKVLSAL 431 (433)
T ss_pred cceEEEeccccccccCcHHHHHHHHHHHHHHHHHh
Confidence 13456666 22346899999999999998875
No 53
>PRK06148 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-60 Score=502.67 Aligned_cols=396 Identities=22% Similarity=0.337 Sum_probs=336.9
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
+.|.++.+++|. |+||.||++||||.++ +.++||+||+|.+|++++++++.. ...+.++...+++++|.+.+|
T Consensus 605 ~~p~~i~~g~G~---~l~D~dG~~ylD~~~g--~~~lGH~hp~v~~Ai~~q~~~l~~--~~~~~~~~~~~lAe~L~~~~p 677 (1013)
T PRK06148 605 SDPIKFVRGWGV---WLIDNRGRAYLDCFNN--VCHVGHAHPRVVAAAARQAARLNT--NTRYLHDAIVAYAERLTATLP 677 (1013)
T ss_pred CCCceEEEeeec---EEEECCCCEEEEcccC--hhhcCCCCHHHHHHHHHHHhhcCC--cCCcCCHHHHHHHHHHHHhCC
Confidence 568899999887 8999999999999998 478999999999999999988632 235678999999999999998
Q ss_pred CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhcc-CCCeeEeCCCC
Q psy14484 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSL-LNKTYIITTPD 170 (430)
Q Consensus 92 ~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 170 (430)
.+.++++|++||+||++.|+|+++.++ ++.+||+++++|||++.+++++++.. ++.++.+. ..++..++.|+
T Consensus 678 ~~~~~v~f~nSGsEA~e~AlklAr~~t------Gr~~ii~~~~~YHG~t~~a~s~s~~~-~~~~~~~~~~~~~~~~~~p~ 750 (1013)
T PRK06148 678 DGLTVAFFVNSGSEANSLALRLARAHT------GQRDAIVLDHAYHGTTTELIDLSPYK-FNRKGGKGRPDHVEVAEVPD 750 (1013)
T ss_pred CCcCEEEEeCCcHHHHHHHHHHHHHhc------CCCeEEEEcCCccCCCcchhhcCchh-hcccCCCCCCCCceEcCCCC
Confidence 667899999999999999999999986 88999999999999999988887633 34333332 34445666776
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHH---hCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC
Q psy14484 171 SRNINKGNSANEIARCAIFDLEILLK---KNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVG 247 (430)
Q Consensus 171 ~~~~~~~~~~~~~~~~d~~~le~~l~---~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g 247 (430)
.++.+++....+......+.+++.++ ..++++++||+|| +++++|.++|+++|+++|+++|++||+++|+||||+|
T Consensus 751 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EP-v~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtG 829 (1013)
T PRK06148 751 SYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAES-IPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVG 829 (1013)
T ss_pred ccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcC-CcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccC
Confidence 66666543323333334555665554 2346899999999 9999999999999999999999999999999999999
Q ss_pred CCCccc-ccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh
Q psy14484 248 CGRTGK-FFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN 326 (430)
Q Consensus 248 ~g~~g~-~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~ 326 (430)
|||+|. +|+++++++.|||+|+||+|+|| +|+|++++++++++.+.. + ..+.+||++||++|+++.++|++++
T Consensus 830 fGRtG~~~~a~e~~gv~PDivt~gK~lggG-~Plgav~~~~ei~~~~~~-g----~~~~~Tf~gnpla~aaa~a~L~~i~ 903 (1013)
T PRK06148 830 FGRVGSHWWAFETQGVVPDIVTMGKPIGNG-HPMGAVVTTREIADSFDN-G----MEYFNTFGGNPVSCAIGLAVLDIIE 903 (1013)
T ss_pred CCCCCCcchhhhhcCCCcceeeecccccCC-cceEEEEEcHHHHhhccC-C----CccccCCCCCHHHHHHHHHHHHHHh
Confidence 999996 78999999999999999999999 699999999999988764 1 2367999999999999999999999
Q ss_pred hcCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCcc---chhHHHHHHHHHHHCCcEEeecC---C
Q psy14484 327 KDNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQ---IETFSKKFFVAALKNELLLRPIG---N 399 (430)
Q Consensus 327 ~~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~a~~~~~~l~~~Gv~~~~~~---~ 399 (430)
++++.+++++++++|+++|+++ .+++.+..++|.|+|+++++. .+..+ ....+..+++.|+++||++.+.+ +
T Consensus 904 ~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~-~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~~~ 982 (1013)
T PRK06148 904 DEDLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELV-TDRKTKAPATAIARYVKNGARERGILIGTEGPHDN 982 (1013)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEEEEEec-CCccccCccHHHHHHHHHHHHhCCeEEeccCCCCC
Confidence 9999999999999999999998 678888899999999999997 54321 12345789999999999998754 8
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 400 TVYLMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 400 ~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
++||.|++++|+++|++++++|++++.++.
T Consensus 983 vlr~~Ppl~it~~~id~~l~~l~~~l~~~~ 1012 (1013)
T PRK06148 983 VLKIRPPLIFSRADADHLLEVLDDVLAAAL 1012 (1013)
T ss_pred EEEEeCCccCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999998764
No 54
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=100.00 E-value=1.7e-60 Score=463.56 Aligned_cols=385 Identities=28% Similarity=0.419 Sum_probs=327.8
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
+.|.++.+++|. |+||.||++||||.+++|+.+|||+||+|.+|+++++++..+.......++...+++++|.+.++
T Consensus 20 ~~p~~~~~~~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~ 96 (425)
T PRK09264 20 SFPVVFDKAKGS---WLYDEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGLDMHTTAKREFLETFEETIL 96 (425)
T ss_pred CCCccEEeeecC---EEEeCCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHhhc
Confidence 468899999887 89999999999999999999999999999999999998754443334567888899999998753
Q ss_pred --CCCC-eEEE-cCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeC
Q psy14484 92 --YKLG-HCFY-GSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIIT 167 (430)
Q Consensus 92 --~~~~-~v~~-~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (430)
.+.+ ++.| ++||+||++.|+|+++.++ +|.+||++.++|||++.+++++++.+.++..+.+...+..++|
T Consensus 97 ~~~~~~~~~~f~~~sGseA~e~AlklAr~~t------gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p 170 (425)
T PRK09264 97 KPRGLDYKVQFTGPTGTNAVEAALKLARKVT------GRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMP 170 (425)
T ss_pred CCcCCCceEEEeCCCHHHHHHHHHHHHHHhc------CCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeC
Confidence 2233 5766 5899999999999999985 7889999999999999999999887777777776666777787
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHhCC---CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecc
Q psy14484 168 TPDSRNINKGNSANEIARCAIFDLEILLKKNH---NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEI 244 (430)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~---~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv 244 (430)
+|+.++. ..+|++++++.++++. +++++||+|| +++++|.++|+++|+++|+++|++||+++|+|||
T Consensus 171 ~~~~~~~---------~~~~~~~l~~~l~~~~~~~~~~aavi~Ep-v~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV 240 (425)
T PRK09264 171 YDGYFGG---------DVDTLAYLEKLLEDSSSGVDLPAAVIVET-VQGEGGINVASAEWLQRLAKLCRKHDILLIVDDI 240 (425)
T ss_pred CCCcccc---------chhHHHHHHHHHHhccCCCCceEEEEEec-ccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEech
Confidence 7753221 1248889999997642 4799999999 9999999999999999999999999999999999
Q ss_pred ccCCCCcccccccccCCCCCceeeeecccCC-CccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHH-
Q psy14484 245 AVGCGRTGKFFACEHAEIWPDFLCLSKGITG-GYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATL- 322 (430)
Q Consensus 245 ~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~g-G~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l- 322 (430)
|+||||+|.+++++.+++.||++++||++++ | +|+|++++++++ ..+.. ..+++||++||++++++.+++
T Consensus 241 ~tG~GrtG~~~~~~~~~v~PDi~t~~K~l~~~G-~pigav~~~~~i-~~~~~------~~~~~T~~gnp~~~aaa~a~l~ 312 (425)
T PRK09264 241 QAGCGRTGTFFSFERAGITPDIVTLSKSISGYG-LPMALVLIKPEL-DVWKP------GEHNGTFRGNNLAFVTATAALE 312 (425)
T ss_pred hhCCccccHHHHHhhcCCCCCEEEeccccCCCc-cceEEEEEchhh-hccCC------CccCCCCCCCHHHHHHHHHHHH
Confidence 9999999998888999999999999999998 6 799999999887 34432 347889999999999999999
Q ss_pred HHHhhcCHHHHHHHHHHHHHHHHHch-hcCCC-eeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC--
Q psy14484 323 EIFNKDNILQRISQDMKKITKALTSL-ITHPK-IINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-- 398 (430)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-- 398 (430)
++++++++.+++++++++++++|+++ ..++. ...+++.|+++++++. +. ..+..+++.+.++||++.+.+
T Consensus 313 ~~~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~-~~-----~~~~~l~~~~~~~Gv~~~~~~~~ 386 (425)
T PRK09264 313 EYWSDDAFEKEVKAKGELVRERLEEIAAKYPGLGAEVRGRGMMQGIDFG-DG-----ELAGKIAAEAFENGLIIETSGPE 386 (425)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHhCCCceecceecccEEEEEec-Ch-----HHHHHHHHHHHHCCCEEeccCCC
Confidence 66667789999999999999999988 45664 3678899999999987 42 224678999999999998754
Q ss_pred -CEEEEeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 399 -NTVYLMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 399 -~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
..|||+|++++|+++|++++++|++++.++.
T Consensus 387 ~~~lr~~p~l~~t~~ei~~~~~~l~~~l~~~~ 418 (425)
T PRK09264 387 DEVVKLLPPLTIDEEELEEGLDILEEAVAEVL 418 (425)
T ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 7999999999999999999999999998753
No 55
>PRK08297 L-lysine aminotransferase; Provisional
Probab=100.00 E-value=4.2e-60 Score=460.91 Aligned_cols=399 Identities=22% Similarity=0.365 Sum_probs=322.3
Q ss_pred CCcee--EEeecCCceeEEEEC-CCCEEEecccccccccCCCCCHHHHH--HHHHHHhhccc--cccCCCCCHHHHHHHH
Q psy14484 12 SNNLV--IRSLKNSWKWSLIDV-SGKRYLDAISSWWVNLFGHSNSYINK--ALKNQLNKLEH--VMLSNLTHKPVIKLSE 84 (430)
Q Consensus 12 ~~~~~--~~~~~~~~~~~~~d~-~g~~~lD~~~~~~~~~lG~~~p~v~~--a~~~~~~~~~~--~~~~~~~~~~~~~l~~ 84 (430)
+.|++ +.+++|+ |+||. ||++||||.+++|+.+|||+||+|.+ ++++++.+..+ .....+.++...++++
T Consensus 23 ~~p~~~~i~~a~G~---~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~ 99 (443)
T PRK08297 23 GFDLVLDLERSQGS---YLVDARTGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVD 99 (443)
T ss_pred CCCcceEEEeccCC---EEEECCCCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHH
Confidence 34555 6788777 89995 99999999999999999999999999 99999987643 2233567788899999
Q ss_pred HHHhhc-CCCCCeEEEcCCchHHHHHHHHHHHHhhhh----cCC--CCCcEEEEEcCCCCCcchhhhccCCCccchhhhh
Q psy14484 85 KLSSLT-QYKLGHCFYGSDGASAVEVALKMSFHYWYN----KGF--LNKKKFICLQNSYHGETLGALAVTNIQSFKEIYT 157 (430)
Q Consensus 85 ~l~~~~-~~~~~~v~~~~sgteA~~~al~~~~~~~~~----~g~--~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~ 157 (430)
+|.+.. |.+.++++|++||+||++.|+|+++.+++. +|. ++|.+||.+.++|||++.+++++++.+.++..+.
T Consensus 100 ~l~~~~~p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~ 179 (443)
T PRK08297 100 TFARVLGDPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARF 179 (443)
T ss_pred HHHhhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccC
Confidence 999987 546789999999999999999999988642 454 3578999999999999999999887543322222
Q ss_pred ccCCCeeEeCCCCCCCCCC-C---CChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHH
Q psy14484 158 SLLNKTYIITTPDSRNINK-G---NSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICN 233 (430)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~ 233 (430)
+.. ....++.|... .+. . .+...+..++++++++.+.++++++++||+|| +++++|.++|+++|+++|+++|+
T Consensus 180 ~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EP-i~g~~G~~~pp~~yl~~lr~lc~ 256 (443)
T PRK08297 180 PKF-DWPRIDNPKLR-FPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEP-IQGEGGDNHFRPEFFAAMRELCD 256 (443)
T ss_pred CCC-CccccCCCCCC-CCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEcc-ccCCCCCcCCCHHHHHHHHHHHH
Confidence 211 11122222211 110 1 11334556789999999987778999999999 99999999999999999999999
Q ss_pred hcCCEEEEeccccCCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHH
Q psy14484 234 NYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPL 313 (430)
Q Consensus 234 ~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ 313 (430)
+||++||+||||+||||+|.+|+++++++.||++++||+++ +|+++.++++.+.... .......|++||++||+
T Consensus 257 ~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~-----~~a~l~~~~i~~~~~~-~~~~~~~~~~T~~gnpl 330 (443)
T PRK08297 257 EHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVAFGKKTQ-----VCGIMAGRRVDEVEDN-VFAVSSRINSTWGGNLV 330 (443)
T ss_pred HcCCEEEEechhhccCccchHHHHHhcCCCCCEEEeccccc-----ccceecchHHHHhhhh-hccCccccCCCCCccHH
Confidence 99999999999999999999999999999999999999973 4556666654432211 00011248899999999
Q ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHch-hcCCCee-eEeecceEEEEEEeecCCccchhHHHHHHHHHHHCC
Q psy14484 314 ACCAALATLEIFNKDNILQRISQDMKKITKALTSL-ITHPKII-NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNE 391 (430)
Q Consensus 314 ~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~G 391 (430)
+++++.++|+.++++++.+++++++++++++|+++ .+++.+. .+++.|+++++++. +. .....+++.|+++|
T Consensus 331 ~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G~~~~i~~~-~~-----~~~~~~~~~l~~~G 404 (443)
T PRK08297 331 DMVRARRILEVIEEDGLVENAARQGEYLLARLEELAAEFPAVVSNVRGRGLMCAFDLP-TT-----ADRDEVIRRLWEEG 404 (443)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeeccceEEEEEec-CH-----HHHHHHHHHHHHCC
Confidence 99999999999988999999999999999999998 5677654 88999999999997 41 22467999999999
Q ss_pred cEEeecC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 392 LLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 392 v~~~~~~-~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
|++.+.+ +.+||+|++.+|++||++++++|++++.++
T Consensus 405 vl~~~~~~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 405 VLVLPCGERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred EEEecCCCCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 9998876 789999999999999999999999999875
No 56
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=2.7e-60 Score=459.58 Aligned_cols=388 Identities=22% Similarity=0.330 Sum_probs=315.1
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHH--HhhccccccCCCCCHHHHHHHHHHHh-
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQ--LNKLEHVMLSNLTHKPVIKLSEKLSS- 88 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~--~~~~~~~~~~~~~~~~~~~l~~~l~~- 88 (430)
+.|+++.+++|+ |+||.||++||||.+++|+.++||+||+|.+|++++ ...+.+. +.+.++...++++.|.+
T Consensus 39 ~~p~~~~~a~G~---~l~D~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~~--~~~~~~~~~~la~~l~~~ 113 (464)
T TIGR00699 39 HFLADYEKSRGN---YLVDVDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLINR--PALGNFPSKDWAKILKEG 113 (464)
T ss_pred ccceEEEecccC---EEEeCCCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhccc--ccCCcHHHHHHHHHHHHh
Confidence 568899999888 799999999999999999999999999999999985 3332222 24566777788888754
Q ss_pred ---hcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCC-------------------CC--CcEEEEEcCCCCCcchhhh
Q psy14484 89 ---LTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGF-------------------LN--KKKFICLQNSYHGETLGAL 144 (430)
Q Consensus 89 ---~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~-------------------~~--~~~vl~~~~~yhg~~~~~~ 144 (430)
..|.+.++++|++||+||++.|+|+++.+++.+++ ++ +.+||.+.++|||++.+++
T Consensus 114 l~~~~p~~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~al 193 (464)
T TIGR00699 114 ILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSL 193 (464)
T ss_pred HHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHH
Confidence 66656789999999999999999999988654321 12 3489999999999999999
Q ss_pred ccCCCccchhhhhccCCCeeEeCCCCCCCCCCC---CChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCC
Q psy14484 145 AVTNIQSFKEIYTSLLNKTYIITTPDSRNINKG---NSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYD 221 (430)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~ 221 (430)
++++.+.++.. .+......++++|. .+.+.. ...+....++++++++++.++++++++||+|| +++++|.++|+
T Consensus 194 s~t~~~~~~~~-~~~~~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EP-v~g~~G~~~~~ 270 (464)
T TIGR00699 194 STTRSKPIHKL-DIPAFDWPQAPFPS-LKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEP-IQSEGGDNHAS 270 (464)
T ss_pred HhcCCcccccc-CCCCCCceecCCCC-cccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeC-CCCCCCCcCCC
Confidence 98876544333 22223445666664 222111 11133456789999999987667899999999 99999999999
Q ss_pred hHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCC--CceeeeecccC-CCccccEEEEEcHHHHHhhhccCC
Q psy14484 222 SIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIW--PDFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNN 298 (430)
Q Consensus 222 ~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~--~d~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~ 298 (430)
++|+++|+++|++||++||+|||++||||+|.+|+++++++. ||++|+||+++ ||+ . +.+ +. +..
T Consensus 271 ~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~gK~lg~gG~-~----~~~-~~---~~~--- 338 (464)
T TIGR00699 271 PDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTFSKKFQTAGY-F----FHD-PA---FRP--- 338 (464)
T ss_pred HHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEEehhhhccCCc-c----ccc-hh---ccC---
Confidence 999999999999999999999999999999999999999997 99999999996 563 2 222 22 211
Q ss_pred cccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHch-hcCC-CeeeEe--ecceEEEEEEeecCCc
Q psy14484 299 INIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSL-ITHP-KIINFR--QKGMIWAFDVIIEDPE 374 (430)
Q Consensus 299 ~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l-~~~~-~~~~~~--~~g~~~~~~~~~~~~~ 374 (430)
.....+++||.+||++++++.++|+.++++++.+++++++++|+++|+++ .+++ .+..++ +.|+|+.+++. +
T Consensus 339 ~~~~~~~~T~~gnp~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~-~--- 414 (464)
T TIGR00699 339 NKPYRQFNTWMGDPSRALILREIIQEIKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTP-D--- 414 (464)
T ss_pred CCCcccccCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecC-C---
Confidence 12345889999999999999999999999999999999999999999998 5688 677888 99999999886 3
Q ss_pred cchhHHHHHHHHHHHCCcEEeecC-CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 375 QIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 375 ~~~~~a~~~~~~l~~~Gv~~~~~~-~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
...+..+.+.++++|+++.+.+ +.+||.|++++|++||++++++|++++
T Consensus 415 --~~~~~~i~~~~~~~Gvl~~~~g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 415 --EAKRDKLLKKARNNGVNIGGCGVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred --HHHHHHHHHHHHHCCcEEecCCCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 1225789999999999998876 799999999999999999999998764
No 57
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=2.1e-60 Score=457.75 Aligned_cols=375 Identities=27% Similarity=0.422 Sum_probs=319.4
Q ss_pred cCCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhh
Q psy14484 10 KSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSL 89 (430)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 89 (430)
+.+.|.++.+++|+ |+||.||++||||.+++++.+|||+||+|.+|+++++++..+... ...+++..+++++|.+.
T Consensus 15 ~~~~~~~~~~~~G~---~~~d~dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~~-~~~~~~~~~la~~l~~~ 90 (395)
T PRK03715 15 TNRPDIVFTHGKGS---WLYDHNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSP-AFYNEPMAKLAGLLTQH 90 (395)
T ss_pred cCCCCceEEeeecC---EEEECCCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhcccccc-cccCHHHHHHHHHHhhc
Confidence 34567889999888 799999999999999999999999999999999999987654432 45578888999999887
Q ss_pred cCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC
Q psy14484 90 TQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP 169 (430)
Q Consensus 90 ~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (430)
. ..++++|++||+||++.|+++++.+++ ++.+++.+||+++++|||++.+++++++.+.++..+.+...++..+++
T Consensus 91 ~--~~~~v~f~~SGseA~e~Aik~ar~~~~-~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~- 166 (395)
T PRK03715 91 S--CFDKVFFANSGAEANEGAIKLARKWGR-KHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAEL- 166 (395)
T ss_pred c--CCCEEEEeCCcHHHHHHHHHHHHHHhh-ccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCC-
Confidence 5 467999999999999999999998754 333577899999999999999999988877666655554444433333
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCC
Q psy14484 170 DSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG 249 (430)
Q Consensus 170 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g 249 (430)
+|++++++.+. +++++|++|| +++++|.++|+++|+++|+++|++||+++|+||+|+|||
T Consensus 167 ----------------~d~~~l~~~l~---~~~aavi~Ep-v~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~G 226 (395)
T PRK03715 167 ----------------NDIASVEKLIT---DKTVAVMLEP-VQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCG 226 (395)
T ss_pred ----------------chHHHHHHHcC---CCceEEEEeC-CcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence 28899998885 5799999999 999999999999999999999999999999999999999
Q ss_pred CcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcC
Q psy14484 250 RTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDN 329 (430)
Q Consensus 250 ~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~ 329 (430)
|+|.+|+++++++.||++|+||+++|| +|+|++++++++.. +.. ..+++||+++|++++++.++|+.+++++
T Consensus 227 RtG~~~a~~~~gv~PDi~t~gK~lg~G-~p~~av~~~~~i~~-~~~------~~~~~T~~g~pl~~aaala~L~~l~~~~ 298 (395)
T PRK03715 227 RTGTLFAYELSGIEPDIMTLGKGIGGG-VPLAALLAKAEVAV-FEA------GDQGGTYNGNPLMTAVGVAVISQLLAPG 298 (395)
T ss_pred CCcchhhHhhcCCCCceeeehhhhhCC-cceEEEEEcccccc-ccC------CCcCCCCCCCHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999 79999999999852 222 1378999999999999999999998889
Q ss_pred HHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHC---CcEEeec-CCEEEEe
Q psy14484 330 ILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKN---ELLLRPI-GNTVYLM 404 (430)
Q Consensus 330 ~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~---Gv~~~~~-~~~lR~~ 404 (430)
+.+++++++++|+++|+++ ..++ +..+++.|+|+.+++. ++. +..+.+.+.+. |+++.+. ++.+||+
T Consensus 299 l~~~~~~~g~~l~~~L~~l~~~~~-i~~vrG~Glm~~i~l~-~~~------~~~~~~~~~~~~~~Gi~~~~~~~~~lR~~ 370 (395)
T PRK03715 299 FLEGVRARGEYLKEKLLELSEERG-LEGERGEGLLRALLLG-KDI------GPQIVEKARDMQPDGLLLNAPRPNLLRFM 370 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCC-cCeEEcceeEEEEEec-Cch------HHHHHHHHHhccCCCEEEeecCCCEEEEe
Confidence 9999999999999999988 4444 5678999999999997 421 23444445445 9998754 5899999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 405 PPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 405 ~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
|++.+|++||++++++|++++.++
T Consensus 371 p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 371 PALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred CCcccCHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999875
No 58
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=100.00 E-value=4.7e-60 Score=459.33 Aligned_cols=380 Identities=26% Similarity=0.403 Sum_probs=332.4
Q ss_pred CCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhc
Q psy14484 11 SSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLT 90 (430)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 90 (430)
.+.|.++.+++|. |+||.||++||||.+++|+++|||+||+|.+|+++++.++.+... .+.++...+++++|++..
T Consensus 19 ~~~~~~~~~~~G~---~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~-~~~~~~~~~la~~l~~~~ 94 (406)
T PRK12381 19 APAPFIPVRGEGS---RLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGN-GYTNEPVLRLAKKLIDAT 94 (406)
T ss_pred CCCCceEEEeecC---EEEeCCCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccccC-ccCCHHHHHHHHHHHhhC
Confidence 4567899999888 799999999999999999999999999999999999987644332 456788889999999987
Q ss_pred CCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC
Q psy14484 91 QYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD 170 (430)
Q Consensus 91 ~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (430)
..++++|++||+||++.|+|+++.++..++.+++.+|+.++++|||++.+++++++.+.++..+.++..+...++++
T Consensus 95 --~~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 171 (406)
T PRK12381 95 --FADRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYN- 171 (406)
T ss_pred --CCCeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCC-
Confidence 45799999999999999999999987666656788999999999999999989888777776666665555555554
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCC
Q psy14484 171 SRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGR 250 (430)
Q Consensus 171 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~ 250 (430)
|++++++.+. +++++|++|| +++++|.++|+++|+++|+++|++||+++|+||+|+|+|+
T Consensus 172 ----------------d~~~l~~~l~---~~~aaviiEP-v~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr 231 (406)
T PRK12381 172 ----------------DLNSASALID---DQTCAVIVEP-IQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGR 231 (406)
T ss_pred ----------------CHHHHHHhcc---CCeeEEEEeC-CcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCC
Confidence 7889998885 5799999999 9999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCH
Q psy14484 251 TGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNI 330 (430)
Q Consensus 251 ~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~ 330 (430)
+|.+++++..++.||+++|||+++|| +|+|++++++++++.+.. ..+++||+++|++++++.++|+.++++++
T Consensus 232 ~G~~~~~~~~~v~pDi~t~sK~l~gG-~~ig~~~~~~~~~~~~~~------~~~~~t~~~~pl~~aaa~a~l~~l~~~~~ 304 (406)
T PRK12381 232 TGELYAYMHYGVTPDVLTTAKALGGG-FPIGAMLTTEKCASVMTV------GTHGTTYGGNPLASAVAGKVLELINTPEM 304 (406)
T ss_pred CcchhhhHhhCCCCCEEEehhhhhCC-CceEEEEEcHHHHhhcCC------CCCCCCCCCCHHHHHHHHHHHHHHhhccH
Confidence 99887778889999999999999988 799999999999888764 35778999999999999999999888889
Q ss_pred HHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-CEEEEeCCCC
Q psy14484 331 LQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYI 408 (430)
Q Consensus 331 ~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-~~lR~~~~~~ 408 (430)
.++++++++++.++|+++ ..++.+..+++.|+++++++. +.. ...+..+.+.|+++||++.+.+ +.+||+|++.
T Consensus 305 ~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~-~~~---~~~~~~~~~~l~~~Gv~v~~~g~~~lRl~p~~~ 380 (406)
T PRK12381 305 LNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLN-AEY---AGKAKQISQEAAKAGVMVLIAGPNVVRFAPALN 380 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEec-Cch---hhHHHHHHHHHHHCCcEEeeCCCCEEEEeCCcc
Confidence 999999999999999988 456667788999999999887 421 1124678899999999998765 7999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHh
Q psy14484 409 LNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 409 ~t~e~i~~~~~~l~~~l~~~ 428 (430)
+|+++|++++++|++++.++
T Consensus 381 ~t~~~i~~~~~~l~~~l~~~ 400 (406)
T PRK12381 381 ISEEEITTGLDRFARACERF 400 (406)
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999865
No 59
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=100.00 E-value=7e-60 Score=480.66 Aligned_cols=412 Identities=24% Similarity=0.429 Sum_probs=335.3
Q ss_pred CceeEEeecCC-ceeEEEECCCC----EEEecccccccccCC-CCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHH
Q psy14484 13 NNLVIRSLKNS-WKWSLIDVSGK----RYLDAISSWWVNLFG-HSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKL 86 (430)
Q Consensus 13 ~~~~~~~~~~~-~~~~~~d~~g~----~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l 86 (430)
.+.++.+++|. +..|++|.||+ +|||+.++||+.++| |+||+|.+|+.+|+.++.+.+...+.++...+|+++|
T Consensus 339 ~~~vi~~a~G~~~~~~~~d~~G~~~~~~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~hv~~~~~~hepa~~LAe~L 418 (817)
T PLN02974 339 SVTVIDSRCGEDFSVYKPKTNSTCSIVQQFDACASWWTQGPDPTLQPELARAVAYAAGRYGHVMFPENVHEPALRAAELL 418 (817)
T ss_pred CceEEEeeecCceeEEEECCCCCcccceEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCCccccCccCCHHHHHHHHHH
Confidence 46888999884 33479999998 999999999999999 6899999999999999888776677899999999999
Q ss_pred HhhcCC-CCCeEEEcCCchHHHHHHHHHHHH-hhhhcCCC------------CCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 87 SSLTQY-KLGHCFYGSDGASAVEVALKMSFH-YWYNKGFL------------NKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 87 ~~~~~~-~~~~v~~~~sgteA~~~al~~~~~-~~~~~g~~------------~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
.+..+. ..++|+|++||+||++.|+|++++ ++..+|.+ +|.+||.+.++|||.+.+++++++.+.+
T Consensus 419 ~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~ 498 (817)
T PLN02974 419 LGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVF 498 (817)
T ss_pred HhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhh
Confidence 996542 267999999999999999999975 66666754 5789999999999999999999987766
Q ss_pred hhhh-hcc-CCCeeEeCCCCCC--------------CCCC----------------CCChhHHHHHHHHHHHHHHHh---
Q psy14484 153 KEIY-TSL-LNKTYIITTPDSR--------------NINK----------------GNSANEIARCAIFDLEILLKK--- 197 (430)
Q Consensus 153 ~~~~-~~~-~~~~~~~~~~~~~--------------~~~~----------------~~~~~~~~~~d~~~le~~l~~--- 197 (430)
+..+ .++ .....+++.|..+ +... .++..++....++.+++.|++
T Consensus 499 ~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~ 578 (817)
T PLN02974 499 TGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEA 578 (817)
T ss_pred hcccccccccCCCcccCCCccccccccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhcc
Confidence 6554 232 1122233333211 1000 001122333456788888864
Q ss_pred --CCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeeecccCC
Q psy14484 198 --NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITG 275 (430)
Q Consensus 198 --~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~g 275 (430)
.++++++||+||++++.+|+++|+++|+++|+++|++||++||+|||++||||+|.+|+++++++.|||+|++|+|+|
T Consensus 579 ~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~~gKgLtg 658 (817)
T PLN02974 579 SAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIACYAKLLTG 658 (817)
T ss_pred ccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEEeecccccC
Confidence 246899999999448999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHH----HHHHHHHHHHHHHH-Hchhc
Q psy14484 276 GYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNIL----QRISQDMKKITKAL-TSLIT 350 (430)
Q Consensus 276 G~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~----~~~~~~~~~l~~~l-~~l~~ 350 (430)
|++|+|++++++++++.+..+.....+.|++||++||++|+++.++|++++++++. ++.+++..++.+.| +.+..
T Consensus 659 G~~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~ 738 (817)
T PLN02974 659 GLVPLAATLATEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISS 738 (817)
T ss_pred CCCccEEEEEcHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 98899999999999998863222245779999999999999999999999887544 44555566666777 44566
Q ss_pred CCCeeeEeecceEEEEEEeecCCcc---chhHHHHHHHHHH-HCCcEEeecCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 351 HPKIINFRQKGMIWAFDVIIEDPEQ---IETFSKKFFVAAL-KNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 351 ~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~a~~~~~~l~-~~Gv~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
++.+..+++.|+|+++++. ++... ....+..+++.++ ++|+++.+.++++|+.|++.++++++++++++|.+.|
T Consensus 739 ~p~V~~VRg~Gl~~~iel~-~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~Gnvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 739 LPNVERVVSLGTVLALELD-AEGSGSGYSSLYARSVVRRLRREDGIYARPLGNVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred CCCeeEEEeeeeEEEEEEe-cCCcccccchHHHHHHHHHHHHhCCEEEEecCCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 8889999999999999998 54321 1123567888899 9999999999999999999999999999999998876
No 60
>PLN00144 acetylornithine transaminase
Probab=100.00 E-value=3.3e-60 Score=455.26 Aligned_cols=370 Identities=28% Similarity=0.459 Sum_probs=325.5
Q ss_pred EeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeE
Q psy14484 18 RSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHC 97 (430)
Q Consensus 18 ~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v 97 (430)
.+++|+ |+||.||++||||.+++|+.++||+||+|.+|++++++++.+... .+.++...+++++|.+.. ..+++
T Consensus 2 ~~~~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-~~~~~~~~~la~~l~~~~--~~~~v 75 (382)
T PLN00144 2 VSGKGC---KLYDVEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSN-VYHTIPQVELAKRLVASS--FADRV 75 (382)
T ss_pred eeeecc---EEEeCCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCCccc-cccCHHHHHHHHHHHhcC--CCCeE
Confidence 345555 899999999999999999999999999999999999998765433 345788899999999886 45799
Q ss_pred EEcCCchHHHHHHHHHHHHhhhhcCCCC-------CcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC
Q psy14484 98 FYGSDGASAVEVALKMSFHYWYNKGFLN-------KKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD 170 (430)
Q Consensus 98 ~~~~sgteA~~~al~~~~~~~~~~g~~~-------~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (430)
+|++||+||++.|+|+++.++..++.+. +.+||.+.++|||++.+++++++.+.++..+.+...++.+++++
T Consensus 76 ~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~- 154 (382)
T PLN00144 76 FFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYG- 154 (382)
T ss_pred EEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCC-
Confidence 9999999999999999999876554322 57899999999999999999998877777777766666677665
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCC
Q psy14484 171 SRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGR 250 (430)
Q Consensus 171 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~ 250 (430)
|++++++.+. .+++++|++|| +++++|...++++|+++|+++|++||+++|+||+|+||+|
T Consensus 155 ----------------d~~~l~~~~~--~~~~aavi~eP-~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr 215 (382)
T PLN00144 155 ----------------NLEAARKLIQ--KGKTAAVFVEP-VQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGR 215 (382)
T ss_pred ----------------CHHHHHHhcC--CCCeEEEEEcc-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCc
Confidence 7899998885 36899999999 8999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCH
Q psy14484 251 TGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNI 330 (430)
Q Consensus 251 ~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~ 330 (430)
+|.+++++.+++.||+++|||++++| +|+|++++++++++.+.. ..+.+|++++|++++++.++|++++++++
T Consensus 216 ~g~~~~~~~~~~~PDi~t~sK~l~~G-~pig~v~~~~~~~~~~~~------~~~~~T~~~~pl~~aaa~a~l~~i~~~~~ 288 (382)
T PLN00144 216 TGYLWAHEAYGVEPDIMTLAKPLAGG-LPIGAVLVTEKVASAINP------GDHGSTFAGGPLVCNAALAVLDKISKPGF 288 (382)
T ss_pred cchHhhhhhcCCCCCEEEecccccCC-cceEEEEEcHHHHhccCC------CCCCCCCCCCHHHHHHHHHHHHHHhhchH
Confidence 99888877889999999999999999 799999999999888764 34789999999999999999999988999
Q ss_pred HHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC--CEEEEeCCC
Q psy14484 331 LQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG--NTVYLMPPY 407 (430)
Q Consensus 331 ~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~--~~lR~~~~~ 407 (430)
.++++++++++++.|+++ ..+|.+..+++.|+++++++. .. +..+++.++++||++.+.+ +.+||+|++
T Consensus 289 ~~~~~~~g~~l~~~l~~~~~~~~~~~~vrg~G~~~~l~l~-~~-------~~~~~~~~~~~Gv~i~~~~~~~~lrl~p~~ 360 (382)
T PLN00144 289 LASVAKKGEYLRELLRRKLGGNPHVKEVRGVGLLVGIQLD-VP-------AGPLVDACRDSGLLVLTAGKGDVVRLVPPL 360 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCceeeecCceEEEEEec-Cc-------cHHHHHHHHHCCeEEeecCCCCEEEEeCCC
Confidence 999999999999999886 667777788999999999986 31 2578999999999998864 899999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHh
Q psy14484 408 ILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 408 ~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+++++++++++++|++++.++
T Consensus 361 ~~~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 361 VISEAELEQAVEILADCLPAL 381 (382)
T ss_pred ccCHHHHHHHHHHHHHHHHhc
Confidence 999999999999999998764
No 61
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=1.1e-59 Score=458.04 Aligned_cols=385 Identities=19% Similarity=0.264 Sum_probs=320.2
Q ss_pred ccccccc-CCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHH
Q psy14484 4 IVYFKKK-SSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKL 82 (430)
Q Consensus 4 ~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l 82 (430)
++++... .+.|.++.+++|+ |+||.||++||||.+++|+.++||+||+|.+|++++++++.. ....++...++
T Consensus 25 ~~~~~~~~~~~p~~~~~a~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~---~~~~~~~~~~l 98 (428)
T PRK12389 25 SRSYKAVGGGAPVVMERGKGA---YFYDVDGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVL---YGTPTELEIEF 98 (428)
T ss_pred cccccccCCCCCeEEEeccCC---EEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCc---cCCCCHHHHHH
Confidence 4444322 2578999999888 799999999999999999999999999999999999987543 24678888999
Q ss_pred HHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchh------hh
Q psy14484 83 SEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKE------IY 156 (430)
Q Consensus 83 ~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~------~~ 156 (430)
+++|.+..| ..++++|++||+||++.|+|+++.++ +|.+||.+.++|||++.++++.++...++. .+
T Consensus 99 a~~l~~~~p-~~~~v~f~~sGseA~e~AlklAr~~t------gr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~ 171 (428)
T PRK12389 99 AKMLKEAIP-SLEKVRFVNSGTEAVMTTIRVARAYT------GRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGV 171 (428)
T ss_pred HHHHHHhCC-CCcEEEEeCCHHHHHHHHHHHHHHhh------CCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCC
Confidence 999999887 67899999999999999999999986 889999999999999998888776432211 00
Q ss_pred h-ccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhc
Q psy14484 157 T-SLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNY 235 (430)
Q Consensus 157 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~ 235 (430)
. ....+...+++ +|++.+++.+.++++++++||+|| +++++|.++|+++|+++|+++|++|
T Consensus 172 ~~~~~~~~~~~~~-----------------~d~~~l~~~l~~~~~~vaavi~EP-v~g~~G~~~p~~~yl~~l~~lc~~~ 233 (428)
T PRK12389 172 PKSIAQEVITVPF-----------------NDIEALKEALDKWGDEVAAVLVEP-IVGNFGIVEPKPGFLEAVNELAHEA 233 (428)
T ss_pred CCcccCceEEcCC-----------------CCHHHHHHHHHhcCCcEEEEEEeC-CCCCCCCcCCCHHHHHHHHHHHHHc
Confidence 0 11122233333 378999999987667899999999 9999999999999999999999999
Q ss_pred CCEEEEeccccCCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHH
Q psy14484 236 NIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLAC 315 (430)
Q Consensus 236 gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~ 315 (430)
|++||+|||++|| |++..++.+++++.||++|+||+++|| +|+|++++++++++.+.. .....+++||++||+++
T Consensus 234 g~llI~DEV~tG~-Rt~~~~a~~~~gv~PDivt~gK~lggG-~Pi~av~~~~~i~~~~~~---~~~~~~~~T~~gnpl~~ 308 (428)
T PRK12389 234 GALVIYDEVITAF-RFMYGGAQDLLGVEPDLTALGKIIGGG-LPIGAYGGRKDIMEQVAP---LGPAYQAGTMAGNPASM 308 (428)
T ss_pred CCEEEEEcccccc-ccCcchhhHHhCCCCCeeeechhhcCC-CceeEEeEHHHHHhhhcc---CCCcccccCCccCHHHH
Confidence 9999999999999 998777788899999999999999999 799999999999988753 12346889999999999
Q ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHch-hcCCCeeeE-eecceEEEEEEeecCCcc--------chhHHHHHHH
Q psy14484 316 CAALATLEIFNKDNILQRISQDMKKITKALTSL-ITHPKIINF-RQKGMIWAFDVIIEDPEQ--------IETFSKKFFV 385 (430)
Q Consensus 316 ~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~-~~~g~~~~~~~~~~~~~~--------~~~~a~~~~~ 385 (430)
+++.++|+.++++++.+++++++++|+++|+++ .+++.+..+ ++.| ++.+++. .+... ....+..+.+
T Consensus 309 Aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g-~~gi~~~-~~~~~~~~~~~~~~~~~~~~~~~ 386 (428)
T PRK12389 309 AAGIACLEVLQQEGVYEKLDRLGAMLEEGILEAAEKHGITITINRLKG-ALTVYFT-DEKVTNYDQAERSDGEAFGKFFK 386 (428)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCc-EEEEEEe-CCCCCChhhhcccCHHHHHHHHH
Confidence 999999999988899999999999999999988 567765555 6777 7778876 43210 1123567889
Q ss_pred HHHHCCcEEeecC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 386 AALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 386 ~l~~~Gv~~~~~~-~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.|+++||++.+.+ +. +.|++.+|++||++++++|++++.++
T Consensus 387 ~l~~~Gv~~~~~~~~~--~~~~l~~t~e~id~~~~~l~~~l~~~ 428 (428)
T PRK12389 387 LMLNQGINLAPSKYEA--WFLTTAHTEEDIEETLEAVDRAFAQL 428 (428)
T ss_pred HHHHCCcEeecCCCCC--eeecCCCCHHHHHHHHHHHHHHHHhC
Confidence 9999999998764 23 45799999999999999999998764
No 62
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=100.00 E-value=3.4e-59 Score=454.91 Aligned_cols=393 Identities=21% Similarity=0.262 Sum_probs=311.9
Q ss_pred ccccccccCCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHH
Q psy14484 3 NIVYFKKKSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKL 82 (430)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l 82 (430)
+++.|....+.|+++.+++|+ |+||.||++||||.+++|+.+|||+||+|.++++++++++.. ....++...++
T Consensus 71 ~~r~~~~~~~~p~~~~~a~G~---~l~D~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~~---~~~~~~~~~~l 144 (474)
T PLN02482 71 PVRAFKSVGGQPIVFDRVKGS---YAWDVDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTS---FGAPCLLENVL 144 (474)
T ss_pred cchhhcccCCCCeeEEEeeeC---EEEECCCCEEEEecccccccccCCCCHHHHHHHHHHHhhCCC---CCCCCHHHHHH
Confidence 345554445678999999888 799999999999999999999999999999999999988653 24577888999
Q ss_pred HHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhh--ccCCCccchhhhhccC
Q psy14484 83 SEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGAL--AVTNIQSFKEIYTSLL 160 (430)
Q Consensus 83 ~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~--~~~~~~~~~~~~~~~~ 160 (430)
+++|.+.+| ..+++.|++||+||++.|+|+++.++ +|++||.+.++|||++.... ..++...+..+..+
T Consensus 145 Ae~l~~~~p-~~~~v~f~~SGsEA~e~AlklAR~~t------gr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~-- 215 (474)
T PLN02482 145 AEMVIDAVP-SVEMVRFVNSGTEACMGVLRLARAYT------GREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSP-- 215 (474)
T ss_pred HHHHHHhCC-CCCEEEEeCChHHHHHHHHHHHHHhc------CCCEEEEECCccCCCcchhhhhcCCCccccCCCCCC--
Confidence 999999998 57999999999999999999999986 89999999999999864322 22221111100000
Q ss_pred CCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEE
Q psy14484 161 NKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLI 240 (430)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li 240 (430)
.......++ ...+.+||++++++.+.++++++++||+|| +++++|.++|+++|+++|+++|++||++||
T Consensus 216 -g~~~~~~~~---------~~~~~~nd~~~l~~~l~~~~~~iAavI~Ep-v~g~~G~i~p~~~fl~~lr~lc~~~g~lLI 284 (474)
T PLN02482 216 -GVPKAATSA---------TLTAPYNDLEAVKKLFEANKGEIAAVILEP-VVGNSGFIVPKKEFLEGLREITKENGALLV 284 (474)
T ss_pred -CCCCCCCCC---------eEEecCCChHHHHHHHHhCCCceEEEEECC-CCCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 000000000 001122488999999987777899999999 999999999999999999999999999999
Q ss_pred EeccccCCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHH
Q psy14484 241 ADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALA 320 (430)
Q Consensus 241 ~DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~ 320 (430)
+|||++|| |+|.+++.+++++.||++||||+++|| +|+|++++++++++.+.. ...+.+++||++||++++++.+
T Consensus 285 ~DEV~tGf-R~g~~ga~~~~gv~PDi~t~gK~lggG-~Pigav~g~~ei~~~~~~---~~~~~~~~T~~gnpl~~aAala 359 (474)
T PLN02482 285 FDEVMTGF-RIAYGGAQEYFGITPDLTTLGKVIGGG-LPVGAYGGRREIMEMVAP---AGPMYQAGTLSGNPLAMTAGIH 359 (474)
T ss_pred EeccccCe-ecCcchHhHHhCCCCCEEEecchhhCC-CceEEEEEcHHHHHhhcc---CCCcccccCcchhHHHHHHHHH
Confidence 99999999 999888888899999999999999999 799999999999988764 2346688999999999999999
Q ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCc--------cchhHHHHHHHHHHHCC
Q psy14484 321 TLEIFNKDNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPE--------QIETFSKKFFVAALKNE 391 (430)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~--------~~~~~a~~~~~~l~~~G 391 (430)
+|++++++++.+++++++++|+++|+++ .+++........+.++.+++. .+.. .....+..+.+.|+++|
T Consensus 360 ~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g~~gi~f~-~~~~~~~~~~~~~d~~~~~~~~~~l~~~G 438 (474)
T PLN02482 360 TLKRLQQPGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISGMFGFFFT-EGPVYNFADAKKSDTAKFARFHRGMLEEG 438 (474)
T ss_pred HHHHHhccCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccceEEEEEEe-cCCccChhhhccCCHHHHHHHHHHHHHCC
Confidence 9999988899999999999999999988 443321111122237777775 4311 11123467889999999
Q ss_pred cEEeecCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 392 LLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 392 v~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
|++.+.+...+ .|++.+|++|||++++++++++.++
T Consensus 439 v~~~~~~~~~~-~psl~ht~~dId~~l~al~~~l~~~ 474 (474)
T PLN02482 439 VYLAPSQFEAG-FTSLAHTEEDIDFTIAAAERVLARI 474 (474)
T ss_pred eEEeccCCCCC-cCCCCCCHHHHHHHHHHHHHHHHhC
Confidence 99987542222 4899999999999999999998764
No 63
>PLN02624 ornithine-delta-aminotransferase
Probab=100.00 E-value=2.3e-58 Score=452.90 Aligned_cols=386 Identities=27% Similarity=0.426 Sum_probs=333.5
Q ss_pred CCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhc
Q psy14484 11 SSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLT 90 (430)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 90 (430)
.+.|+++.+++|. |+||.||++||||.+++++.++||+||+|.+|++++++++.+... .+.++...++++.|++++
T Consensus 55 ~~~p~~~~~a~G~---~l~d~dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~~-~~~~~~~~~la~~L~~~~ 130 (474)
T PLN02624 55 HPIPVVFSRAKGS---RIWDPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSR-AFYNDKFPEFAEYLTSMF 130 (474)
T ss_pred CCCCceEEeeeeC---EEEECCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCccc-ccCCHHHHHHHHHHHhhc
Confidence 4568899999887 799999999999999999999999999999999999998765443 467888899999999998
Q ss_pred CCCCCeEEEcCCchHHHHHHHHHHHHhhhh-cCCC-CCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCC
Q psy14484 91 QYKLGHCFYGSDGASAVEVALKMSFHYWYN-KGFL-NKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITT 168 (430)
Q Consensus 91 ~~~~~~v~~~~sgteA~~~al~~~~~~~~~-~g~~-~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (430)
+.++++|++||+||++.|+|+++.++.. +|.+ ++.+|+.+.++|||.+.+++++++.+.++..|.+...+..++++
T Consensus 131 --~~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 208 (474)
T PLN02624 131 --GYDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF 208 (474)
T ss_pred --CCCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC
Confidence 4679999999999999999999987533 2322 45689999999999999999998877777777776666666655
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCC
Q psy14484 169 PDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGC 248 (430)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~ 248 (430)
+ |++.+++.++..++++++|++|| +++++|.+.|+++|+++|.++|++||+++|+||+|+|+
T Consensus 209 ~-----------------d~~~l~~~l~~~~~~iaaiiiEp-v~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~ 270 (474)
T PLN02624 209 G-----------------DLDALEKIFEEDGDRIAAFLFEP-IQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGL 270 (474)
T ss_pred C-----------------CHHHHHHHHHhCCCCEEEEEECC-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc
Confidence 3 78999999986667899999999 99999999999999999999999999999999999999
Q ss_pred CCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhc
Q psy14484 249 GRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD 328 (430)
Q Consensus 249 g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~ 328 (430)
|++|.++++++.++.||++++||++++|++|+|++++++++++.+.. ..+++|+++++++++++.++|+.++++
T Consensus 271 GrtG~~~a~~~~~i~pDiv~lsK~lggG~~pigav~~~~~i~~~~~~------~~~~~T~~g~pl~~aaa~aaLe~l~~~ 344 (474)
T PLN02624 271 ARTGKMLACDWEEVRPDVVILGKALGGGVIPVSAVLADKDVMLCIKP------GEHGSTFGGNPLASAVAMAALQVVQDE 344 (474)
T ss_pred CcCcchhhHHhcCCCCCEEEecccccCCCCcceeeeecHHHHhHhcc------CCcCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 99998888888899999999999999988899999999998877654 347889999999999999999988888
Q ss_pred CHHHHHHHHHHHHHHHHHch-hcCC-CeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-CEEEEeC
Q psy14484 329 NILQRISQDMKKITKALTSL-ITHP-KIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMP 405 (430)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~l-~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-~~lR~~~ 405 (430)
++.+++.+++++++++|+++ ..++ .+..+++.|.++.+++. .... ....+.++++.|+++||++.|.+ +.+||+|
T Consensus 345 ~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~l~-~~~~-~~~~a~~~~~~L~e~GV~v~p~~~~~lR~~p 422 (474)
T PLN02624 345 KLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGLLNAVVLN-SPKL-GPVSAYDVCLKLKERGLLAKPTHDTIIRLAP 422 (474)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeEEEEEEEec-CCCc-ChHHHHHHHHHHHhCCeEEecCCCCEEEEEC
Confidence 88999999999999999988 5666 36678899999998886 4321 11224678999999999999875 7899999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 406 PYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 406 ~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
++.+|+++|++++++|++++.+-
T Consensus 423 ~l~~t~e~id~~l~~L~~~l~~~ 445 (474)
T PLN02624 423 PLSISEDELQECSKALSDVLEHD 445 (474)
T ss_pred CccCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988643
No 64
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=6.4e-58 Score=442.77 Aligned_cols=388 Identities=18% Similarity=0.283 Sum_probs=316.0
Q ss_pred cccccccCCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHH
Q psy14484 4 IVYFKKKSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLS 83 (430)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (430)
++++....+.|.++.+++|+ |+||.||++||||.+++|+.+|||+||+|.+|++++++++. .....++...+++
T Consensus 26 ~~~~~~~~~~p~~i~~a~G~---~l~D~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~---~~~~~~~~~~~la 99 (433)
T PRK00615 26 VRACRSVGITPPIVSSASGD---IFIDSLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGT---SYGLTSEQEILFA 99 (433)
T ss_pred cccccccCCCCceEEEeeeC---EEEECCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCC---CCCCCCHHHHHHH
Confidence 44443334689999999888 79999999999999999999999999999999999998754 2346678889999
Q ss_pred HHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcc---hhhhccCCCccch--hhhhc
Q psy14484 84 EKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGET---LGALAVTNIQSFK--EIYTS 158 (430)
Q Consensus 84 ~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~---~~~~~~~~~~~~~--~~~~~ 158 (430)
++|.+.+|...++++|++||+||++.|+|+++.++ +|.+|+.+.++|||++ ..+++.++..... ..+.+
T Consensus 100 ~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~t------gr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~ 173 (433)
T PRK00615 100 EELFSYLGLEDHKIRFVSSGTEATMTAVRLARGIT------GRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDT 173 (433)
T ss_pred HHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhh------CCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCC
Confidence 99999987555799999999999999999999986 8899999999999987 5555544321100 00100
Q ss_pred cCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCE
Q psy14484 159 LLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIH 238 (430)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~ 238 (430)
.........+| .+|++++++.+.++.+++++||+|| +++++|.++|+++|+++|+++|++||++
T Consensus 174 ~~~~~~~~~~~---------------~~d~~~l~~~l~~~~~~~aavI~Ep-v~~~~G~~~p~~~yl~~l~~lc~~~g~l 237 (433)
T PRK00615 174 DLAHPLTLSLP---------------YNDFQIFQTVMNSLGHRVAGVIFEP-ICANMGVVLPKPGFIEGIIQTCRRTGSL 237 (433)
T ss_pred CCCCCCeEeCC---------------CCCHHHHHHHHHhcCCceEEEEECC-CCCCCCcccCCHHHHHHHHHHHHHcCCE
Confidence 00000111112 2378899999987667899999999 9999999999999999999999999999
Q ss_pred EEEeccccCCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHH
Q psy14484 239 LIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAA 318 (430)
Q Consensus 239 li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa 318 (430)
+|+|||++|| |+|.+++.+++++.||++++||+++|| +|+|++++++++++.+.. .....+++|++++|++++++
T Consensus 238 lI~DEv~tG~-R~G~~ga~~~~gv~PDi~~~gK~lggG-~p~~av~~~~~i~~~~~~---~~~~~~~~T~~g~p~~~aa~ 312 (433)
T PRK00615 238 SIMDEVVTGF-RVAQGGAAAIYHVKPDITVYGKILGGG-LPAAAVVAHKSIMDHLAP---EGTIFQAGTLSGNPLAMAAG 312 (433)
T ss_pred EEEEcccccc-cccHhHHHHhcCCCCCeEEEcccccCC-cceeeeeecHHHHhhhcC---CCCcccCCCCcccHHHHHHH
Confidence 9999999999 899888888899999999999999999 799999999999988754 12345788999999999999
Q ss_pred HHHHHHHhhcCHHHHHHHHHHHHHHHHHch-hc--CCCeeeEeecceEEEEEEeecCCcc--------chhHHHHHHHHH
Q psy14484 319 LATLEIFNKDNILQRISQDMKKITKALTSL-IT--HPKIINFRQKGMIWAFDVIIEDPEQ--------IETFSKKFFVAA 387 (430)
Q Consensus 319 ~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l-~~--~~~~~~~~~~g~~~~~~~~~~~~~~--------~~~~a~~~~~~l 387 (430)
.++|++++++++.+++++++++|.++|+++ .. ++ +..++ .|+++++++. .+... .......+++.|
T Consensus 313 la~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~g~~-v~~~r-~G~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~l 389 (433)
T PRK00615 313 KASINLCREQGFYTQLSTLEQNFLSPIEEMIRSQGFP-VSLVR-YGSMFSFFFN-ENRPNNLAEAQLSDIEAFQTFYQSA 389 (433)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEe-eceEEEEEEe-CCCCCChHHHhhCCHHHHHHHHHHH
Confidence 999999988889999999999999999887 44 34 45556 8999999997 54211 112245789999
Q ss_pred HHCCcEEeecC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 388 LKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 388 ~~~Gv~~~~~~-~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
.++||++.+.. .. ..++..||++|||+++++++++++++.
T Consensus 390 ~~~Gv~~~~~~~~~--~~ls~~ht~~did~~~~a~~~~~~~~~ 430 (433)
T PRK00615 390 FSKGVYLSPSPFEA--SFLSSAHSMENLDYAQNVLIDSLEKVF 430 (433)
T ss_pred HHCCeeecCccccc--cceecCCCHHHHHHHHHHHHHHHHHHh
Confidence 99999988653 11 245778999999999999999999874
No 65
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=100.00 E-value=5.6e-58 Score=445.91 Aligned_cols=394 Identities=22% Similarity=0.332 Sum_probs=316.1
Q ss_pred CCcee--EEeecCCceeEEEEC-CCCEEEecccccccccCCCCCHHHH--HHHHHHHhhcccc--ccCCCCCHHHHHHHH
Q psy14484 12 SNNLV--IRSLKNSWKWSLIDV-SGKRYLDAISSWWVNLFGHSNSYIN--KALKNQLNKLEHV--MLSNLTHKPVIKLSE 84 (430)
Q Consensus 12 ~~~~~--~~~~~~~~~~~~~d~-~g~~~lD~~~~~~~~~lG~~~p~v~--~a~~~~~~~~~~~--~~~~~~~~~~~~l~~ 84 (430)
+.|.+ +.+++|. |+||. ||++||||.+++|+.+|||+||+|. +|+++++.+..+. ......++...++++
T Consensus 16 ~~p~~~~~~~a~G~---~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~ 92 (431)
T TIGR03251 16 GFDLVLDLDRSRGS---VLVDARDGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVD 92 (431)
T ss_pred CCceeeEEEeccCC---EEEECCCCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHH
Confidence 44655 4888777 89996 9999999999999999999999999 9999999876432 223466778888999
Q ss_pred HHHhhc-CCCCCeEEEcCCchHHHHHHHHHHHHhhh----hcCCCC--CcEEEEEcCCCCCcchhhhccCCCccchhhhh
Q psy14484 85 KLSSLT-QYKLGHCFYGSDGASAVEVALKMSFHYWY----NKGFLN--KKKFICLQNSYHGETLGALAVTNIQSFKEIYT 157 (430)
Q Consensus 85 ~l~~~~-~~~~~~v~~~~sgteA~~~al~~~~~~~~----~~g~~~--~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~ 157 (430)
+|.+.. +.+.++++|++||+||++.|+|+++.++. .+|.++ +.+||.+.++|||++.+++++++...++..+.
T Consensus 93 ~l~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~ 172 (431)
T TIGR03251 93 TFARVLGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARF 172 (431)
T ss_pred HHHHhcCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCC
Confidence 998886 44678999999999999999999999863 346543 67899999999999999999887654544443
Q ss_pred ccCCCeeEeCCCCCCCCCCC----CChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHH
Q psy14484 158 SLLNKTYIITTPDSRNINKG----NSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICN 233 (430)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~ 233 (430)
+.. ....++.|.. ..+++ ........++++++++.+.++++++++||+|| +++++|.++|+++|+++|+++|+
T Consensus 173 ~~~-~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEP-v~g~~G~~~~~~~~l~~l~~lc~ 249 (431)
T TIGR03251 173 PKF-DWPRIDNPKL-TFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEP-IQGEGGDNHFRPEFLRAMRALCD 249 (431)
T ss_pred CCC-CCccCCCCcc-cCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEec-cccCCCCcCCCHHHHHHHHHHHH
Confidence 322 1222333322 11111 11233446788999999987778999999999 99999999999999999999999
Q ss_pred hcCCEEEEeccccCCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHH
Q psy14484 234 NYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPL 313 (430)
Q Consensus 234 ~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ 313 (430)
+||++||+||||+|||++|.+|+++.+++.||++++||++ ++++++.++++.+.... .......+.+||++||+
T Consensus 250 ~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~~gK~~-----~~~g~~~~~~i~~~~~~-~~~~~~~~~~T~~gnpl 323 (431)
T TIGR03251 250 EHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVAFGKKT-----QVCGIMAGRRVDEVADN-VFAVPSRLNSTWGGNLV 323 (431)
T ss_pred HcCCEEEEecchhccCccchHHHHHhcCCCCCEEEecccC-----ccceEEecchHHHhhhh-cccCccccCCCCCCCHH
Confidence 9999999999999999999999999999999999999986 44555566554222210 00011247899999999
Q ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHch-hcCC-CeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCC
Q psy14484 314 ACCAALATLEIFNKDNILQRISQDMKKITKALTSL-ITHP-KIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNE 391 (430)
Q Consensus 314 ~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l-~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~G 391 (430)
+++++.++|+.++++++.+++++++++++++|+++ .+++ .+..+++.|+++.+++. +. ..+..+++.|+++|
T Consensus 324 ~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~-~~-----~~~~~~~~~l~~~G 397 (431)
T TIGR03251 324 DMVRATRILEIIEEERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLP-ST-----ADRDEVIRQLYREG 397 (431)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeC-CH-----HHHHHHHHHHHhCC
Confidence 99999999999988899999999999999999988 5677 67788999999999987 41 22467999999999
Q ss_pred cEEeecC-CEEEEeCCCCCCHHHHHHHHHHHHH
Q psy14484 392 LLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQ 423 (430)
Q Consensus 392 v~~~~~~-~~lR~~~~~~~t~e~i~~~~~~l~~ 423 (430)
|++.+.+ +.+||+|++.+|++||++++++|++
T Consensus 398 vl~~~~g~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 398 VLLLGCGERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred eEEecCCCCeEEEECCccCCHHHHHHHHHHHHh
Confidence 9998876 7899999999999999999999876
No 66
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=1.2e-57 Score=441.87 Aligned_cols=377 Identities=30% Similarity=0.461 Sum_probs=326.8
Q ss_pred cCCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhh
Q psy14484 10 KSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSL 89 (430)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 89 (430)
+.+.|+++.+++|. |+||.||++||||.+++|+++|||+||+|.+|++++++++.+... .+.++...+++++|++.
T Consensus 10 ~~~~~~~~~~~~G~---~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~la~~l~~~ 85 (389)
T PRK01278 10 YNRADLAFERGEGV---WLIDEDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSN-LYRIPEQERLAERLVEN 85 (389)
T ss_pred cCCCCceEEeeecC---EEEECCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCcccc-ccCChHHHHHHHHHHhh
Confidence 34568899999888 799999999999999999999999999999999999987654332 35678889999999998
Q ss_pred cCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC
Q psy14484 90 TQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP 169 (430)
Q Consensus 90 ~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (430)
. ..++++|++||+||++.|+++++.++...|++++++||+++++|||++..+...++.+.+...+.+...++..++++
T Consensus 86 ~--~~~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (389)
T PRK01278 86 S--FADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFG 163 (389)
T ss_pred C--CCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCC
Confidence 7 45799999999999999999999887777777788999999999999999888887666554444444444444444
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCC
Q psy14484 170 DSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG 249 (430)
Q Consensus 170 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g 249 (430)
|++++++.++ +++++|++|| +++++|...++++++++|+++|++||+++|+||+|+|++
T Consensus 164 -----------------d~~~l~~~l~---~~~~avivep-~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g 222 (389)
T PRK01278 164 -----------------DIEALKAAIT---PNTAAILIEP-IQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMG 222 (389)
T ss_pred -----------------CHHHHHHhhC---CCeEEEEEec-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence 7899999885 4799999999 999999899999999999999999999999999999999
Q ss_pred CcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcC
Q psy14484 250 RTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDN 329 (430)
Q Consensus 250 ~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~ 329 (430)
++|.+++.+..++.||+++|||++++| +|+|++++++++++.+.. ..+++|+++++++++++.++|+.+++++
T Consensus 223 ~~g~~~~~~~~~~~pdi~t~sK~l~~G-~~ig~~~~~~~~~~~~~~------~~~~~t~~~~~~~~aaa~a~l~~l~~~~ 295 (389)
T PRK01278 223 RTGKLFAHEWAGVTPDIMAVAKGIGGG-FPLGACLATEEAAKGMTP------GTHGSTYGGNPLAMAVGNAVLDVILAPG 295 (389)
T ss_pred cCCcceeecccCCCCCEEEEehhccCC-cceEEEEEcHHHHhccCC------CCCCCCCCccHHHHHHHHHHHHHHhhhH
Confidence 999877777789999999999999988 799999999998887754 3577899999999999999999887778
Q ss_pred HHHHHHHHHHHHHHHHHch-hcCC-CeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-CEEEEeCC
Q psy14484 330 ILQRISQDMKKITKALTSL-ITHP-KIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPP 406 (430)
Q Consensus 330 ~~~~~~~~~~~l~~~l~~l-~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-~~lR~~~~ 406 (430)
+.+++++++++++++|+++ ..++ .+..+++.|.++++++. .+ +.++++.|+++||++.|++ +.+||+|+
T Consensus 296 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~-~~-------~~~~~~~l~~~GV~~~p~~~~~lR~~p~ 367 (389)
T PRK01278 296 FLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCV-VP-------NRDLVQALRDEGLLTVGAGDNVVRLLPP 367 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCceeeEecccEEEEEEEe-cC-------HHHHHHHHHHCCeEEeecCCCEEEEeCC
Confidence 8899999999999999987 5566 56678899999998876 41 3679999999999999875 79999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHh
Q psy14484 407 YILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 407 ~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+.+++++|++++++|++++.++
T Consensus 368 ~~~~~~~i~~~l~~l~~~l~~~ 389 (389)
T PRK01278 368 LIITEEEIDEALERLERAAESL 389 (389)
T ss_pred cccCHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999998753
No 67
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=100.00 E-value=8.4e-58 Score=443.09 Aligned_cols=374 Identities=27% Similarity=0.454 Sum_probs=322.7
Q ss_pred cCCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhh
Q psy14484 10 KSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSL 89 (430)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 89 (430)
+.+.|.++.+++|+ |+||.||++||||.+++|+.+|||+||+|.+|+.++++++.+... ...++...+++++|+++
T Consensus 19 ~~~~p~~~~~~~G~---~l~d~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~ 94 (396)
T PRK04073 19 YHPLPIVISEAEGV---WVKDPEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSR-AFHSDQLGPWYEKVAKL 94 (396)
T ss_pred cCCCCceEEeeeec---EEEECCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhcccccc-ccCCHHHHHHHHHHHhc
Confidence 34568899999887 799999999999999999999999999999999999998765432 45678888999999998
Q ss_pred cCCCCCeEEEcCCchHHHHHHHHHHHHhhhh-cCC-CCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeC
Q psy14484 90 TQYKLGHCFYGSDGASAVEVALKMSFHYWYN-KGF-LNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIIT 167 (430)
Q Consensus 90 ~~~~~~~v~~~~sgteA~~~al~~~~~~~~~-~g~-~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (430)
.+ .++++|++||+||++.|+++++.+++. +|. +++++||.++.+|||++..++++++.+.++..+.+...+..+++
T Consensus 95 ~~--~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (396)
T PRK04073 95 TG--KDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIP 172 (396)
T ss_pred CC--CCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeC
Confidence 74 479999999999999999999987432 232 36789999999999999999888887666666666655666665
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC
Q psy14484 168 TPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVG 247 (430)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g 247 (430)
++ |++++++.++ +++++|++|| +++++|.+.|+++|+++|.++|++||+++|+||+|+|
T Consensus 173 ~~-----------------d~~~l~~~i~---~~~~~viiep-~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g 231 (396)
T PRK04073 173 YG-----------------DLEALKAAIT---PNTAAFLVEP-IQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTG 231 (396)
T ss_pred CC-----------------CHHHHHHhcc---cCeEEEEEcC-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhC
Confidence 54 7888888885 5789999999 9999999999999999999999999999999999999
Q ss_pred CCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh
Q psy14484 248 CGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK 327 (430)
Q Consensus 248 ~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~ 327 (430)
|+++|..++++..++.||+++|||++++|++|+|++++++++++.+.. ..+.+||++++++++++.++|+.+++
T Consensus 232 ~g~~g~~~~~~~~~~~pdi~~~sK~lg~gg~~ig~~~~~~~i~~~~~~------~~~~~t~~~~~~~~aaa~aaL~~~~~ 305 (396)
T PRK04073 232 LGRTGKLFACDWDNVTPDMYILGKALGGGVFPISCVAANRDILGVFTP------GSHGSTFGGNPLACAVSIAALEVLEE 305 (396)
T ss_pred CCcCcHHHHhhhcCCCCCEEEecccccCCCCcceEEEEcHHHHhhhcC------CCCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 999998777777889999999999999977899999999999887754 24678999999999999999998877
Q ss_pred cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-CEEEEeCC
Q psy14484 328 DNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPP 406 (430)
Q Consensus 328 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-~~lR~~~~ 406 (430)
+++.++.+++++++.+.|+++ ..+.+..+++.|.|+.+++. .. +..+++.|+++||++.+.+ +++||+|+
T Consensus 306 ~~l~~~~~~~~~~l~~~L~~l-~~~~i~~~~~~g~~~~~~~~-~~-------~~~~~~~l~~~Gv~~~~~~~~~iRi~p~ 376 (396)
T PRK04073 306 EKLPERSLELGEYFKEQLKEI-DNPMIKEVRGRGLFIGVELN-EP-------ARPYCEALKEEGLLCKETHETVIRFAPP 376 (396)
T ss_pred cCHHHHHHHHHHHHHHHHHhh-cCCcccceecceEEEEEEec-ch-------HHHHHHHHHHCCeEEecCCCCEEEEECC
Confidence 889999999999999999887 33556677899999888876 31 3578899999999998765 79999999
Q ss_pred CCCCHHHHHHHHHHHHHHH
Q psy14484 407 YILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 407 ~~~t~e~i~~~~~~l~~~l 425 (430)
+.+|++++++++++|++++
T Consensus 377 l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 377 LVITKEELDWAFEKIKAVL 395 (396)
T ss_pred cccCHHHHHHHHHHHHHHh
Confidence 9999999999999998875
No 68
>PRK07046 aminotransferase; Validated
Probab=100.00 E-value=2.3e-57 Score=441.87 Aligned_cols=378 Identities=19% Similarity=0.233 Sum_probs=310.7
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
+.|+++.+++|+ |+||.|||+||||.+++|+.+|||+||+|.+|++++++++.. ....++...++++.|.+.+
T Consensus 56 ~~p~~~~~a~G~---~v~D~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~---~~~~~~~~~~lAe~l~~~~- 128 (453)
T PRK07046 56 PFPLFVAEARGA---RFTDVDGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGLT---TMLPSEDAAWVGEELARRF- 128 (453)
T ss_pred CCCCeEEeeeeC---EEEeCCCCEEEEecccccccccCCCCHHHHHHHHHHHHhCCC---CCCCCHHHHHHHHHHHHHh-
Confidence 578999999888 799999999999999999999999999999999999987542 3567888999999999998
Q ss_pred CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhcc--CCCccchhhhhcc----CCCeeE
Q psy14484 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAV--TNIQSFKEIYTSL----LNKTYI 165 (430)
Q Consensus 92 ~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~--~~~~~~~~~~~~~----~~~~~~ 165 (430)
+.+++.|++|||||++.|+|++|.++ +|++|+.++++|||++...+.. ++.+.++..+... ......
T Consensus 129 -~~~~v~F~nSGtEA~e~AlrlAR~~T------Gr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~ 201 (453)
T PRK07046 129 -GLPYWQVATTATDANRFVLRWARAVT------GRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRV 201 (453)
T ss_pred -CCCEEEEECCHHHHHHHHHHHHHHhh------CCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEe
Confidence 47899999999999999999999986 8999999999999996544432 2211111111110 011112
Q ss_pred eCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccc
Q psy14484 166 ITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIA 245 (430)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~ 245 (430)
++ ++|++++++++. .+++++||+|| +++++|.++|+++|+++|+++|++||++||+|||+
T Consensus 202 ~~-----------------~nd~~~l~~~l~--~~~vAavi~EP-i~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~ 261 (453)
T PRK07046 202 VE-----------------FNDLAALEAALA--DGDVAAVLAEP-AMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETH 261 (453)
T ss_pred eC-----------------CCCHHHHHHHhC--CCCeEEEEECC-CCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccc
Confidence 22 248999999885 46899999999 99999999999999999999999999999999999
Q ss_pred cCCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccC---CcccccccCCCCCCHHHHHHHHHHH
Q psy14484 246 VGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKN---NINIFLHSHSYSGNPLACCAALATL 322 (430)
Q Consensus 246 ~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~---~~~~~~~~~t~~~~~~~~~aa~~~l 322 (430)
+ | |.|.....+.+++.||++|+||+++|| +|+|++++++++++.+.... ....+.+++||++||++++++.++|
T Consensus 262 t-f-r~g~Gg~~~~~gv~PDi~t~gK~lggG-~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L 338 (453)
T PRK07046 262 T-I-SSGPGGYTRAHGLEPDFLVVGKPIAGG-VPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATL 338 (453)
T ss_pred c-C-ccCCcchhHHhCCCccceeehhhhcCC-CcceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHH
Confidence 8 4 344434456679999999999999999 79999999999998875311 1223468899999999999999999
Q ss_pred HHHhhcCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCcc---------chhHHHHHHHHHHHCCc
Q psy14484 323 EIFNKDNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQ---------IETFSKKFFVAALKNEL 392 (430)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~---------~~~~a~~~~~~l~~~Gv 392 (430)
+.++++++.+++++++++|+++|+++ .+++....+++.|.++.+.+. ++... .......++..|+++||
T Consensus 339 ~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv 417 (453)
T PRK07046 339 AEVMTEAAYAHMLALAARLAAGLRAVIARHGLPWHVTRVGARVEFQFA-PTPPRNGAEAAAALDPELEAALHLYLLNRGV 417 (453)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCcEEEEEEe-CCCCCCHHHHhcccCHHHHHHHHHHHHHCCC
Confidence 99988899999999999999999987 567766789999999988875 32210 11234568888999999
Q ss_pred EEeecCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 393 LLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 393 ~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
++.+.++.++++|+ +|++||+++++++++++++++
T Consensus 418 ~~~~~~~~~~~~p~--~t~~did~~~~~~~~~l~~~~ 452 (453)
T PRK07046 418 LITPFHNMMLVCPA--TTAADVDRLVAAFDACLGELL 452 (453)
T ss_pred EEecccCcEEEeCC--CCHHHHHHHHHHHHHHHHHHh
Confidence 99887777888875 999999999999999998875
No 69
>PRK06149 hypothetical protein; Provisional
Probab=100.00 E-value=2.9e-57 Score=478.55 Aligned_cols=395 Identities=21% Similarity=0.337 Sum_probs=324.7
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
+.|.++.+++|. |+||.||++||||.+++ ..+||+||+|.+|+++++.++.+.. .+.++...+++++|++.+|
T Consensus 566 ~~p~~i~~g~G~---~l~D~dG~~ylD~~~~~--~~lGh~hp~v~~Ai~~q~~~l~~~~--~~~~~~~~elae~L~~~~p 638 (972)
T PRK06149 566 ADPPQIERGWRH---HLFDMAGRSYLDMVNNV--TVLGHGHPRLAAAAARQWSLLNTNS--RFHYAAVAEFSERLAALAP 638 (972)
T ss_pred cCCCeEEEeeee---EEEeCCCCEEEECCCCc--cccCCCCHHHHHHHHHHHHhccccc--cccCHHHHHHHHHHHHhCC
Confidence 356788888776 89999999999999885 5799999999999999998865432 3567888999999999998
Q ss_pred CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhh-hccCCCeeEeCCCC
Q psy14484 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIY-TSLLNKTYIITTPD 170 (430)
Q Consensus 92 ~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 170 (430)
.+.++++|++||+|||+.|+|+++.++ ++.+||+++.+|||++.++.+++.....+... ......+..++.|+
T Consensus 639 ~~~~~v~f~~SGsEA~e~AlklAr~~t------gr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~ 712 (972)
T PRK06149 639 DGLDTVFLVNSGSEANDLAIRLAWAAS------GRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPN 712 (972)
T ss_pred CCcCEEEEeCCchHHHHHHHHHHHHhc------CCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCc
Confidence 667899999999999999999999986 88899999999999998887765432111111 12223445566666
Q ss_pred CCCCCCCCC--hhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCC
Q psy14484 171 SRNINKGNS--ANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGC 248 (430)
Q Consensus 171 ~~~~~~~~~--~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~ 248 (430)
.++.++... ...+. ++++...+.+.+.++++++||+|| +++++|.++|+++|+++|+++|++||+++|+||||+||
T Consensus 713 ~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~iAavI~Ep-v~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGf 790 (972)
T PRK06149 713 TYRGRFRGADSAADYV-RDVVAQLEELDASGRGLAGFICEP-VYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGY 790 (972)
T ss_pred ccCCcCCCcccHHHHH-HHHHHHHHHHhhcCCceEEEEEcc-cccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcC
Confidence 665544211 11111 232222222223357899999999 99999999999999999999999999999999999999
Q ss_pred CCccc-ccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh
Q psy14484 249 GRTGK-FFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK 327 (430)
Q Consensus 249 g~~g~-~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~ 327 (430)
||+|. +|+++++++.||++|+||+++|| +|+|++++++++++.+... ..+.+|+++||++|+++.++|+++++
T Consensus 791 GRtG~~~~a~e~~gv~PDivt~gK~lg~G-~Pl~av~~~~~i~~~~~~~-----~~~~sT~~gnP~~~aaala~L~~i~~ 864 (972)
T PRK06149 791 GRLGHYFWGFEQQGVVPDIITMAKGMGNG-HPLGAVITRREIAEALEAE-----GYFFSSTGGSPVSCRIGMAVLDVLRE 864 (972)
T ss_pred CccCccchhhhhcCCCCCEEEecccccCC-eeeEEEEEcHHHHhhhccC-----CcccCCCCCCHHHHHHHHHHHHHHHh
Confidence 99997 67899999999999999999999 7999999999999887641 12457889999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCc---cchhHHHHHHHHHHHCCcEEeecC---CE
Q psy14484 328 DNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPE---QIETFSKKFFVAALKNELLLRPIG---NT 400 (430)
Q Consensus 328 ~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~a~~~~~~l~~~Gv~~~~~~---~~ 400 (430)
+++.+++++++++|+++|+++ .+++.+..++|.|+|+++++. .+.. .....+..+++.|+++||++.+.+ ++
T Consensus 865 e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~-~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~g~~~~v 943 (972)
T PRK06149 865 EKLQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELV-RDRQTLEPATEETAAICDRLLELGVIMQPTGDHLNI 943 (972)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEe-cCcccCCCChHHHHHHHHHHHhCCeEEeecCCCCCE
Confidence 999999999999999999999 678888999999999999996 4322 122335789999999999999875 78
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 401 VYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 401 lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+||.|++++|++++++++++|++++.+.
T Consensus 944 l~~~Ppl~it~~~id~~~~~l~~~l~~~ 971 (972)
T PRK06149 944 LKIKPPLCLDRESADFFVDMLDRVLTEG 971 (972)
T ss_pred EEEECCCcCCHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999864
No 70
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=100.00 E-value=7.8e-59 Score=438.28 Aligned_cols=336 Identities=36% Similarity=0.614 Sum_probs=291.8
Q ss_pred eEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCC
Q psy14484 16 VIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLG 95 (430)
Q Consensus 16 ~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 95 (430)
++.+++|. |+||.||++|+||.+++++.+|||+||+|.+++++++.+..+.......++...+++++|.+.+|...+
T Consensus 1 ~i~~a~G~---~l~d~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~ 77 (339)
T PF00202_consen 1 FIERAEGA---YLWDVDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSFSGFTHPEAAELAEKLAELFPGGLD 77 (339)
T ss_dssp EEEEEEBT---EEEETTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCSTTTSEEHHHHHHHHHHHHHSSTTEE
T ss_pred CeEEeecC---EEEECCCCEEEECCCCccceecCCCccccchhHHHHhhhcccccccceeccchhhhhhhhhhccccccc
Confidence 46778777 899999999999999999999999999999999999998876665678889999999999999976788
Q ss_pred eEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCC
Q psy14484 96 HCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNIN 175 (430)
Q Consensus 96 ~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (430)
+++|++||+||++.|+|+++.++..+..+++.+|+.+.++|||++.+++++++.+.++..+.+...+..++|+|+...
T Consensus 78 ~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~-- 155 (339)
T PF00202_consen 78 RVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAA-- 155 (339)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHH--
T ss_pred eeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccch--
Confidence 999999999999999999995554445568999999999999999999999988888988888888888888875322
Q ss_pred CCCChhHHHHHHHHHHHHHHHhC-CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccc
Q psy14484 176 KGNSANEIARCAIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF 254 (430)
Q Consensus 176 ~~~~~~~~~~~d~~~le~~l~~~-~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~ 254 (430)
++.....++.+++.+.+. ++++++||+|| +++++|.+.++++|+++|+++|++||+++|+|||++||||+|++
T Consensus 156 -----~~~~~~~~~~~~~~~~~~~~~~iaavivEP-i~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~ 229 (339)
T PF00202_consen 156 -----DEEEQACLNALEELIAALNADEIAAVIVEP-IQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKF 229 (339)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHGGGEEEEEEES-SBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSS
T ss_pred -----hhhHHHHHHHHHHHHHhhcCCcEEEEEEec-cccccCccccccchhhehcccccccccceecccccccccccCCc
Confidence 111222334444444332 57899999999 99999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHH
Q psy14484 255 FACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRI 334 (430)
Q Consensus 255 ~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~ 334 (430)
|+++.+++.||++|+||+++|| +|+|++++++++++.+.. ..+++||+++|++|+++.++|+.++++++.+++
T Consensus 230 ~a~~~~gv~PDiv~~gK~l~gG-~p~sav~~~~~i~~~~~~------~~~~~T~~g~p~~~aaa~~~l~~~~~~~~~~~~ 302 (339)
T PF00202_consen 230 FASEHYGVDPDIVTFGKGLGGG-LPISAVLGSEEIMEAFQP------GSHGSTFGGNPLSCAAALATLEILEEEDLLERV 302 (339)
T ss_dssp SGHHHHTSSSSEEEEEGGGGTT-SSEEEEEEEHHHHTTSCT------TSSTCTTTT-HHHHHHHHHHHHHHHHTTHHHHH
T ss_pred cceecccccCcccccccchhhh-hhcccccccchhhccccc------cccccccccchHhhhhhhhHHHhhccHHHHHHH
Confidence 9999999999999999999999 899999999999988765 238999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEe
Q psy14484 335 SQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVI 369 (430)
Q Consensus 335 ~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~ 369 (430)
++.+++|+++|+++ ..++.+..+++.|+|+++++.
T Consensus 303 ~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~~ie~~ 338 (339)
T PF00202_consen 303 RELGERLREGLRELAARYPLIGEVRGIGLMIGIELV 338 (339)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEEEEEETTEEEEEES
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEEeeeCeEEEEEEE
Confidence 99999999999999 566889999999999999985
No 71
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=100.00 E-value=1.1e-55 Score=429.28 Aligned_cols=381 Identities=25% Similarity=0.436 Sum_probs=324.0
Q ss_pred CCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhc
Q psy14484 11 SSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLT 90 (430)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 90 (430)
.+.|.++.+++|+ |+||.||++||||.+|+|+.+|||+||+|.+++.++++++..... .+.++...+++++|++..
T Consensus 20 ~~~~~~~~~~~G~---~~~d~dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~ 95 (403)
T PRK05093 20 APAEFIPVRGEGS---RVWDQQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISN-VFTNEPALRLAKKLIDAT 95 (403)
T ss_pred CCCCeeEEEeecC---EEEeCCCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCcccC-ccCCHHHHHHHHHHHhhC
Confidence 4578899999888 799999999999999999999999999999999999987543332 345677889999999987
Q ss_pred CCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC
Q psy14484 91 QYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD 170 (430)
Q Consensus 91 ~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (430)
..++++|++||+|||+.|+++++.++..++.+++.+||.++.+|||++..+.++++.+.+...+.+......+++++
T Consensus 96 --~~~~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 172 (403)
T PRK05093 96 --FAERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFN- 172 (403)
T ss_pred --CCCEEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCC-
Confidence 45799999999999999999999886544444788999999999999988888777655554454444444555443
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCC
Q psy14484 171 SRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGR 250 (430)
Q Consensus 171 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~ 250 (430)
|++.+++.+. +++++|++|| +++++|...|+++|+++|+++|++||+++|+||+|+|+++
T Consensus 173 ----------------d~~~l~~~l~---~~~aaiiiep-~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~ 232 (403)
T PRK05093 173 ----------------DLAAVKAVID---DHTCAVVVEP-IQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGR 232 (403)
T ss_pred ----------------CHHHHHHHhc---CCeEEEEEec-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCC
Confidence 8899998885 5799999999 9999998889999999999999999999999999999999
Q ss_pred cccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCH
Q psy14484 251 TGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNI 330 (430)
Q Consensus 251 ~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~ 330 (430)
+|.+++....++.||+.+|||++++| +|+|++++++++++.+.. ..+..|++++++.++++.++|+.+.++++
T Consensus 233 ~g~~~~~~~~~~~pdi~s~sK~l~~G-~rig~vv~~~~i~~~l~~------~~~~~t~~~~~~~~~aa~a~L~~~~~~~~ 305 (403)
T PRK05093 233 TGDLFAYMHYGVTPDILTSAKALGGG-FPIGAMLTTAEIASHFKV------GTHGSTYGGNPLACAVAEAVFDIINTPEV 305 (403)
T ss_pred CccchhhhhcCCCCCEEEecccccCC-cceEEEEEcHHHHhhcCC------CCCCCCCCCCHHHHHHHHHHHHHHhhccH
Confidence 99876667778899999999999988 799999999999888764 34667899999999999999998877889
Q ss_pred HHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-CEEEEeCCCC
Q psy14484 331 LQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYI 408 (430)
Q Consensus 331 ~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-~~lR~~~~~~ 408 (430)
.++++++++++.+.|+++ ...+.+..+++.|.++++.+. .+.. ..+.++++.|+++||.+.+.+ +.+|++|++.
T Consensus 306 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~-~~~~---~~~~~~~~~l~~~Gv~v~~~g~~~lRl~~~~~ 381 (403)
T PRK05093 306 LEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELK-PQYK---GRARDFLNAAAEEGVMVLVAGPDVLRFAPSLV 381 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEec-Ccch---hHHHHHHHHHHHCCeEEecCCCCEEEEeCCCC
Confidence 999999999999999987 445556678888999999886 4211 124679999999999999866 7999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHhh
Q psy14484 409 LNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 409 ~t~e~i~~~~~~l~~~l~~~~ 429 (430)
+++++|++++++|++++.++.
T Consensus 382 ~~~~~i~~~~~~l~~~l~~~~ 402 (403)
T PRK05093 382 IEEADIDEGLARFEKAVAKVV 402 (403)
T ss_pred CCHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999998764
No 72
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=9.7e-55 Score=422.89 Aligned_cols=371 Identities=27% Similarity=0.471 Sum_probs=319.7
Q ss_pred CCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhc
Q psy14484 11 SSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLT 90 (430)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 90 (430)
...|.++.+++|+ ++||.||++||||.+++++++|||+||+|.+++.+++++..+.. ..+.++...+++++|++.+
T Consensus 23 ~~~~~~~~~~~G~---~~~d~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~-~~~~~~~~~~la~~l~~~~ 98 (398)
T PRK03244 23 GTPPLALVRGEGA---VVWDVDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVS-NLFATEPQIALAERLVELL 98 (398)
T ss_pred cCCCceEEEeeec---EEEECCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCcc-CccCCHHHHHHHHHHHHhC
Confidence 3467889998887 89999999999999999999999999999999999998865432 2466777889999999998
Q ss_pred CCC-CCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC
Q psy14484 91 QYK-LGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP 169 (430)
Q Consensus 91 ~~~-~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (430)
+.. +++++|++||+||++.|+++++.. ++++||.++++|||++..+..+++...+...+.+...+...++++
T Consensus 99 ~~~~~~~v~~~~sgsea~~~al~~~~~~-------g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (398)
T PRK03244 99 GAPEGGRVFFCNSGAEANEAAFKLARLT-------GRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYG 171 (398)
T ss_pred CCCCCCEEEEeCchHHHHHHHHHHHHHH-------CCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCC
Confidence 632 479999999999999999998874 678899999999999988887776554444444444444555443
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCC
Q psy14484 170 DSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG 249 (430)
Q Consensus 170 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g 249 (430)
|++++++.+. +++++|++|| +++++|.+.|+++|+++|.++|++||+++|+||+|+|||
T Consensus 172 -----------------d~~~l~~~~~---~~~~aviiep-~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g 230 (398)
T PRK03244 172 -----------------DVDALAAAVD---DDTAAVFLEP-IQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIG 230 (398)
T ss_pred -----------------CHHHHHHhhc---CCeEEEEEec-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCc
Confidence 7888988884 5799999999 999999999999999999999999999999999999999
Q ss_pred CcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcC
Q psy14484 250 RTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDN 329 (430)
Q Consensus 250 ~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~ 329 (430)
|+|.+++++..++.||+++|||++++| +|+|++++++++++.+.. ..+.+||++++++++++.++|+.+++++
T Consensus 231 r~g~~~~~~~~~~~pDi~t~sK~l~~G-~~ig~~~~~~~~~~~~~~------~~~~~t~~~~~~~~aaa~a~l~~~~~~~ 303 (398)
T PRK03244 231 RTGAWFAHQHDGVTPDVVTLAKGLGGG-LPIGACLAFGPAADLLTP------GLHGSTFGGNPVACAAALAVLDTIASEG 303 (398)
T ss_pred ccchHHhhhhhCCCCCEEEEchhhhCC-cccEEEEEcHHHHhhccC------CCCcCCCCCCHHHHHHHHHHHHHHHhcc
Confidence 999877777789999999999999988 799999999998887754 3477899999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-CEEEEeCCCC
Q psy14484 330 ILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYI 408 (430)
Q Consensus 330 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-~~lR~~~~~~ 408 (430)
+.+++++++++|++.|+++ .++.+..+++.|+++++++. .+ .+..+++.|+++|+++.+.+ +++||+|++.
T Consensus 304 ~~~~~~~~~~~l~~~L~~~-~~~~~~~v~g~g~~~~i~~~-~~------~~~~~~~~l~~~Gv~~~~~~~~~iR~~p~~~ 375 (398)
T PRK03244 304 LLENAERLGEQLRAGIEAL-GHPLVDHVRGRGLLLGIVLT-AP------VAKAVEAAAREAGFLVNAVAPDVIRLAPPLI 375 (398)
T ss_pred HHHHHHHHHHHHHHHHHhc-CCCceeeEeeccEEEEEEEe-cc------HHHHHHHHHHHCCeEEeecCCCEEEEECCCc
Confidence 9999999999999999887 35656678889999999987 42 14679999999999998864 8999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHh
Q psy14484 409 LNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 409 ~t~e~i~~~~~~l~~~l~~~ 428 (430)
++++||++++++|++++.++
T Consensus 376 ~t~~~i~~~~~~l~~~l~~~ 395 (398)
T PRK03244 376 ITDAQVDAFVAALPAILDAA 395 (398)
T ss_pred CCHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999865
No 73
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=100.00 E-value=5.9e-54 Score=417.11 Aligned_cols=381 Identities=28% Similarity=0.452 Sum_probs=321.2
Q ss_pred CCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhc
Q psy14484 11 SSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLT 90 (430)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 90 (430)
.+.|.++.+++|+ |++|.||++||||.+++++.++||+||+|.+|++++++++.+... ...++...++++.|++.+
T Consensus 17 ~~~~~~~~~~~g~---~~~~~~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~ 92 (401)
T TIGR01885 17 HPLPVVFSKAEGV---HVWDVEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSR-AFYNDVFGEFAEYVTKLF 92 (401)
T ss_pred CCCCceEEeeecC---EEEeCCCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhcccccc-ccCCHHHHHHHHHHHhhc
Confidence 4567888888887 799999999999999999999999999999999999988664433 346788899999999998
Q ss_pred CCCCCeEEEcCCchHHHHHHHHHHHHhhhhc-CC-CCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCC
Q psy14484 91 QYKLGHCFYGSDGASAVEVALKMSFHYWYNK-GF-LNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITT 168 (430)
Q Consensus 91 ~~~~~~v~~~~sgteA~~~al~~~~~~~~~~-g~-~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (430)
+ .++++|++||++||+.|+++++.++..+ |. +++++|+.++.+|||++.+++++++.+.+...+.+.......+++
T Consensus 93 ~--~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (401)
T TIGR01885 93 G--YDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY 170 (401)
T ss_pred C--CCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC
Confidence 4 5799999999999999999999875432 21 257899999999999999988887765544444443333444444
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCC
Q psy14484 169 PDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGC 248 (430)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~ 248 (430)
+ |+++|++++++.++++++|++|| +++++|.+.|+++|+++|.++|++||+++|+||+|+|+
T Consensus 171 ~-----------------d~~~le~~l~~~~~~~~avi~E~-v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~ 232 (401)
T TIGR01885 171 N-----------------NLEALEEALEDHGPNVCAFIVEP-IQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGL 232 (401)
T ss_pred C-----------------CHHHHHHHHHhcCCCEEEEEEeC-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCC
Confidence 3 78999999976667899999999 99999999999999999999999999999999999999
Q ss_pred CCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhc
Q psy14484 249 GRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD 328 (430)
Q Consensus 249 g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~ 328 (430)
|++|.+++.+..++.||++++||++++|++|+|++++++++++.+.. ..+..|++++|++++++.++|+.++++
T Consensus 233 g~~G~~~~~~~~~~~~di~~~gK~l~~g~~~ig~v~~~~~i~~~~~~------~~~~~t~~~~p~~~~aa~a~L~~i~~~ 306 (401)
T TIGR01885 233 GRTGKLLCVDHENVKPDIVLLGKALSGGVYPVSAVLADDDVMLTIKP------GEHGSTYGGNPLACAVAVAALEVLEEE 306 (401)
T ss_pred CccchhhHHhhcCCCCCEEEeeccccCCCCCcEEEEEcHHHHhhccC------CCCCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 99998777777788999999999999887899999999999887754 235678999999999999999998877
Q ss_pred CHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-CEEEEeCCC
Q psy14484 329 NILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPY 407 (430)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-~~lR~~~~~ 407 (430)
++.++.++++++++++|+++ ..+.+..+++.|.++.+.+. .+.. ...+.++++.|.++||++.+.+ +.+||+|++
T Consensus 307 ~l~~~~~~~~~~~~~~L~~l-~~~~~~~~~g~g~~~~i~~~-~~~~--~~~~~~l~~~l~~~Gv~v~~~~~~~lRi~p~l 382 (401)
T TIGR01885 307 KLAENAEKLGEIFRDQLKKL-PKPIITEVRGRGLLNAIVID-ESKT--GRTAWDLCLKLKEKGLLAKPTHGNIIRLAPPL 382 (401)
T ss_pred cHHHHHHHHHHHHHHHHHhc-cCCceeEEeecCeeEEEEec-cCcc--hhHHHHHHHHHHhCCEEEEecCCCEEEEeCCc
Confidence 88899999999999999988 33555677899999998886 4321 1124789999999999998875 789999999
Q ss_pred CCCHHHHHHHHHHHHHHH
Q psy14484 408 ILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 408 ~~t~e~i~~~~~~l~~~l 425 (430)
.+++++|++++++|++++
T Consensus 383 ~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 383 VITEEQLDEGLEIIKKVI 400 (401)
T ss_pred cCCHHHHHHHHHHHHHHh
Confidence 999999999999998876
No 74
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=5.1e-54 Score=415.04 Aligned_cols=367 Identities=26% Similarity=0.428 Sum_probs=315.1
Q ss_pred CCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhc
Q psy14484 11 SSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLT 90 (430)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 90 (430)
.+.+.++.+++|+ |+||.||++||||.+|+++.+|||+||+|.+++.+++++..+.. ..+.++...++++.+.+..
T Consensus 9 ~~~~~~~~~~~G~---~~~d~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~la~~l~~~~ 84 (377)
T PRK02936 9 GRFPIDIVKGKGT---KVTDNNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHVS-NLFTNSLQEEVASLLAENS 84 (377)
T ss_pred cCCCceEEEeecC---EEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccc-cccCCHHHHHHHHHHHhcC
Confidence 4567889999888 79999999999999999999999999999999999998754332 2345778889999998876
Q ss_pred CCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC
Q psy14484 91 QYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD 170 (430)
Q Consensus 91 ~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (430)
+ .++++|++||++|++.|+++++.++ ++++|++++++|||++...+.+++.+.++..+.+...+..+++++
T Consensus 85 ~--~~~~~~~~sG~~a~~~A~~~a~~~~------g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 155 (377)
T PRK02936 85 A--GDLVFFCNSGAEANEAALKLARKHT------GKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFN- 155 (377)
T ss_pred C--CCEEEEeCCcHHHHHHHHHHHHHhc------CCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCC-
Confidence 4 4689999999999999999988764 788999999999999988888877655555555555555555443
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCC
Q psy14484 171 SRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGR 250 (430)
Q Consensus 171 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~ 250 (430)
|++++++.+. +++++|++|| +++++|..+++++++++|.++|++||+++|+||+|+||++
T Consensus 156 ----------------d~~~l~~~~~---~~~~~ii~e~-i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~ 215 (377)
T PRK02936 156 ----------------DIKALKEVMN---EEVAAVMLEV-VQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGR 215 (377)
T ss_pred ----------------CHHHHHHhcc---CCeEEEEEec-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence 7889998885 5799999999 9999998889999999999999999999999999999999
Q ss_pred cccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCH
Q psy14484 251 TGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNI 330 (430)
Q Consensus 251 ~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~ 330 (430)
+|.+++++..++.||+++|||++++| +|+|++++++++++.+.. ..+.+|+++++++++++.++|+.+..+++
T Consensus 216 ~g~~~~~~~~~~~~di~t~sK~l~~G-~~ig~v~~~~~~~~~~~~------~~~~~t~~~~~~~~aaa~a~l~~~~~~~~ 288 (377)
T PRK02936 216 TGTLFAYEQFGLDPDIVTVAKGLGNG-IPVGAMIGKKELGTAFGP------GSHGSTFGGNPLAMAAAKEVLQVIKQPSF 288 (377)
T ss_pred CchhhHHHhhCCCCcEEEEcccccCC-CccEEEEEcHHHHhhccC------CCCCCCCCCCHHHHHHHHHHHHHHHhccH
Confidence 99877767778899999999999988 799999999999888764 23667889999999999999998877788
Q ss_pred HHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-CEEEEeCCCC
Q psy14484 331 LQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYI 408 (430)
Q Consensus 331 ~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-~~lR~~~~~~ 408 (430)
.++++++.+++++.|+++ .+++.+..+++.|.++++++. ++ +..+.+.|.++||++.+.+ +.+||+|++.
T Consensus 289 ~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~-~~-------~~~~~~~l~~~gv~v~~~g~~~lRi~p~~~ 360 (377)
T PRK02936 289 LEEVQEKGEYFLQKLQEELEHLECVKNIRGKGLMIGIECT-EE-------VAPVIEQLREEGLLVLSAGPNVIRLLPPLV 360 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCcEEeEeecceEEEEEec-ch-------HHHHHHHHHHCCeEEecCCCCEEEEECCcc
Confidence 999999999999999885 566776677888999988887 42 3678889999999999876 7999999999
Q ss_pred CCHHHHHHHHHHHHHHH
Q psy14484 409 LNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 409 ~t~e~i~~~~~~l~~~l 425 (430)
++++++++++++|++++
T Consensus 361 ~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 361 VTKEELDQAVYLLKKVL 377 (377)
T ss_pred cCHHHHHHHHHHHHHhC
Confidence 99999999999998764
No 75
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=100.00 E-value=1.1e-53 Score=416.91 Aligned_cols=391 Identities=29% Similarity=0.441 Sum_probs=327.0
Q ss_pred CceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCC
Q psy14484 13 NNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQY 92 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 92 (430)
.|.++.+++|. |+||.||++||||.+++++.++||+||+|.+++.++++++.+.......++...+++++|.+..|.
T Consensus 23 ~p~~~~~~~G~---~l~d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~ 99 (425)
T PRK08088 23 HPIFADRAENC---RVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEKMNQKVPG 99 (425)
T ss_pred CCceEEeeeeC---EEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCC
Confidence 47889999887 799999999999999999999999999999999999998654433334467778999999998764
Q ss_pred CC-CeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCc-cchhhhhccCCCeeEeCCCC
Q psy14484 93 KL-GHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ-SFKEIYTSLLNKTYIITTPD 170 (430)
Q Consensus 93 ~~-~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 170 (430)
+. ++++|++||+||++.|+++++.++ ++.+||++.++|||.+.++.++++.. .++..+.+....+..+++|.
T Consensus 100 ~~~~~~~f~~sGsea~e~Alklar~~~------~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 173 (425)
T PRK08088 100 DFAKKTLLVTTGSEAVENAVKIARAAT------KRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPC 173 (425)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHHHh------CCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCc
Confidence 44 599999999999999999999886 77889999999999998888877642 24445544445555555554
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHh--CCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCC
Q psy14484 171 SRNINKGNSANEIARCAIFDLEILLKK--NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGC 248 (430)
Q Consensus 171 ~~~~~~~~~~~~~~~~d~~~le~~l~~--~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~ 248 (430)
.++. .+ ...+++.+++.++. .++++++|++|| +++++|.+.++++++++|.++|++||+++|.||+|+|+
T Consensus 174 ~~~~---~~----~~~~~~~l~~~l~~~~~~~~~aavi~Ep-i~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~ 245 (425)
T PRK08088 174 PLHG---VS----EDDAIASIERIFKNDAAPEDIAAIIIEP-VQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGA 245 (425)
T ss_pred cccC---cc----HHHHHHHHHHHHHhccCCCceEEEEECc-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCC
Confidence 3321 11 11247788888862 357899999999 99999999999999999999999999999999999999
Q ss_pred CCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhc
Q psy14484 249 GRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD 328 (430)
Q Consensus 249 g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~ 328 (430)
+++|.+++++..++.||+.+|||++++| +|+|++++++++++.+.. ..+.+|++++++.++++.++|+.++.+
T Consensus 246 g~~g~~~~~~~~~~~pdi~s~sK~l~~G-~rig~v~~~~~~~~~~~~------~~~~~t~~~~~~~~~a~~~~l~~~~~~ 318 (425)
T PRK08088 246 GRTGTLFAMEQMGVAADLTTFAKSIAGG-FPLAGVTGRAEVMDAIAP------GGLGGTYAGNPIACAAALAVLKVFEQE 318 (425)
T ss_pred CcCcchhHHhhcCCCCCEEEEeccccCC-CcceeeEecHHHHhhcCC------CCCCCCCCcCHHHHHHHHHHHHHHHhc
Confidence 9998877777788899999999999999 799999999999988765 347789999999999999999988888
Q ss_pred CHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCc---cchhHHHHHHHHHHHCCcEEeec---CCEE
Q psy14484 329 NILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPE---QIETFSKKFFVAALKNELLLRPI---GNTV 401 (430)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~a~~~~~~l~~~Gv~~~~~---~~~l 401 (430)
++.+++++..+++++.|.++ ..+|.+..+++.|+++++.+. .+.. .....+..+++.|.++||++.++ ++.+
T Consensus 319 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~G~~~~l~l~-~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~~~~i 397 (425)
T PRK08088 319 NLLQKANALGEKLKDGLLAIAEKHPEIGDVRGLGAMIAIELF-EDGDHSKPNAKLTAQIVARARDKGLILLSCGPYYNVL 397 (425)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeccceEEEEEEe-cCCCCCCCCHHHHHHHHHHHHhCCCEEecCCCCCCEE
Confidence 99999999999999999988 567777788899999999985 4322 12223578999999999988765 3889
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 402 YLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 402 R~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
|++|++.+++++|++++++|++++.++
T Consensus 398 Rl~~~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 398 RILVPLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred EEECCCCcCHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999998764
No 76
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=100.00 E-value=7.8e-54 Score=419.18 Aligned_cols=379 Identities=22% Similarity=0.330 Sum_probs=310.5
Q ss_pred CCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhc
Q psy14484 11 SSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLT 90 (430)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 90 (430)
.+.|.++.+++|. |+||.||++||||.+|+|+.++||+||+|.+|+++++++... ....++...+++++|++.+
T Consensus 28 ~~~p~~~~~~~G~---~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~---~~~~~~~~~~lae~l~~~~ 101 (423)
T TIGR00713 28 GPTPFFVARGKGA---YLYDVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGTS---YGAPTEAEILLAKEIISRV 101 (423)
T ss_pred CCCCeeEEeccCC---EEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCc---CCCCCHHHHHHHHHHHHhC
Confidence 3568899999888 799999999999999999999999999999999999987542 2456778899999999998
Q ss_pred CCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCC--ccchhhhhccC-----CCe
Q psy14484 91 QYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNI--QSFKEIYTSLL-----NKT 163 (430)
Q Consensus 91 ~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~--~~~~~~~~~~~-----~~~ 163 (430)
+ ..++|+|++||+||++.|+++++.++ ++++||+++++|||++......+.. ..+..++.+.. ...
T Consensus 102 ~-~~~~v~~~~sGseA~e~Alk~ar~~~------gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (423)
T TIGR00713 102 P-SVEMVRFVNSGTEATMSAVRLARGYT------GRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLT 174 (423)
T ss_pred C-cccEEEEeCCHHHHHHHHHHHHHHhh------CCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccce
Confidence 7 45799999999999999999999886 7899999999999987665554332 11111111110 011
Q ss_pred eEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEec
Q psy14484 164 YIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADE 243 (430)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DE 243 (430)
..+++ +|++++++++.++++++++|++|| +++++|.+.++++|+++|+++|++||+++|+||
T Consensus 175 ~~~~~-----------------~d~~~l~~~i~~~~~~~aavi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DE 236 (423)
T TIGR00713 175 LVLPY-----------------NDLEALEEVFEEYGEEIAGVIVEP-VAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDE 236 (423)
T ss_pred EEeCC-----------------CCHHHHHHHHHHcCCcEEEEEEeC-CCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEc
Confidence 12221 378999999986657899999999 999999888889999999999999999999999
Q ss_pred cccCCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHH
Q psy14484 244 IAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLE 323 (430)
Q Consensus 244 v~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~ 323 (430)
+|+|| ++|..++.+.+++.||+++|||++++| +|+|++++++++++.+.. .....+.+|+++++++++++.++|+
T Consensus 237 v~~g~-r~g~~~~~~~~~~~pDi~t~sK~l~~G-~pig~v~~~~~i~~~~~~---~~~~~~~~T~~~~~~~~aaa~a~l~ 311 (423)
T TIGR00713 237 VMTGF-RVALGGAQEYFGVEPDLTTLGKIIGGG-LPVGAFGGRREIMERLAP---EGPVYQAGTLSGNPLAMAAGLATLK 311 (423)
T ss_pred ccccc-ccCcchhHHHhCCCcchhhhhhhhcCC-CceeeeeEHHHHHHhhCc---CCCeeeccCCCCCHHHHHHHHHHHH
Confidence 99999 888777777789999999999999988 799999999999988764 1234577899999999999999999
Q ss_pred HHhhcCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCc--------cchhHHHHHHHHHHHCCcEE
Q psy14484 324 IFNKDNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPE--------QIETFSKKFFVAALKNELLL 394 (430)
Q Consensus 324 ~~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~--------~~~~~a~~~~~~l~~~Gv~~ 394 (430)
.++++++.++++++.+++++.|+++ ..++....+++.|.++.+++. .+.. .....+..+++.|+++||++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v 390 (423)
T TIGR00713 312 LLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFFT-EEEVTNYADAKKSDTELFAKFFHEMLDKGVFL 390 (423)
T ss_pred HHhcccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccEEEEEEe-cCCCCChhhhhcccHHHHHHHHHHHHHCCeEE
Confidence 9887789999999999999999876 566666677899999998886 4321 01112357888999999998
Q ss_pred eecC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 395 RPIG-NTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 395 ~~~~-~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.+.+ +.+|++|+ +++++|++++++|++++.++
T Consensus 391 ~~~~~~~~~l~~~--~t~~~i~~~~~~l~~~l~~~ 423 (423)
T TIGR00713 391 PPSQFEACFLSAA--HTEEDIENTIEAAEEVFAEL 423 (423)
T ss_pred ecCCccceeeECC--CCHHHHHHHHHHHHHHHhhC
Confidence 7654 57888776 79999999999999998764
No 77
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=1.4e-53 Score=415.55 Aligned_cols=385 Identities=22% Similarity=0.316 Sum_probs=314.8
Q ss_pred ccccCCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHH
Q psy14484 7 FKKKSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKL 86 (430)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l 86 (430)
+......|.++.+++|. |+||.||++||||.+++++.+|||+||+|.+++.+++++.. .....++...+++++|
T Consensus 26 ~~~~~~~~~~~~~a~G~---~l~d~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~---~~~~~~~~~~~la~~L 99 (426)
T PRK00062 26 FKSVGGTPRFIERAKGA---YLYDVDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGL---SFGAPTELEVELAELV 99 (426)
T ss_pred cCCCCCCCeEEEeCcCC---EEEeCCCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhCC---cCCCCCHHHHHHHHHH
Confidence 33333457888898887 89999999999999999999999999999999999998743 2345678888999999
Q ss_pred HhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc--hhhhhccCCC--
Q psy14484 87 SSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF--KEIYTSLLNK-- 162 (430)
Q Consensus 87 ~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~--~~~~~~~~~~-- 162 (430)
.+.++ +.++++|++||+||++.|+++++.++ ++++||.++++|||++.+....++.... ...+.+....
T Consensus 100 ~~~~~-~~~~v~~~~sGseA~e~Aik~a~~~~------g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (426)
T PRK00062 100 IELVP-SIEMVRMVNSGTEATMSAIRLARGYT------GRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDF 172 (426)
T ss_pred HHhCC-CCCEEEEecCHHHHHHHHHHHHHHHh------CCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCccc
Confidence 99886 57899999999999999999999875 7889999999999998666655432111 1111100000
Q ss_pred -eeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEE
Q psy14484 163 -TYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIA 241 (430)
Q Consensus 163 -~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~ 241 (430)
.....+|+ +|++++++.+.++++++++|++|| +++++|.+.|+++|+++|+++|++||+++|+
T Consensus 173 ~~~~~~~~~---------------~d~~~l~~~i~~~~~~~aaiivEp-v~~~~G~~~~~~~~l~~l~~l~~~~~~llI~ 236 (426)
T PRK00062 173 AKHTLTAPY---------------NDLEAVEELFEEYGDEIAAVIVEP-VAGNMGVVPPKPGFLEGLRELCDEHGALLIF 236 (426)
T ss_pred ccceEEcCC---------------CCHHHHHHHHHhCCCcEEEEEEeC-CcCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 00111221 378899998876667899999999 9999999999999999999999999999999
Q ss_pred eccccCCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHH
Q psy14484 242 DEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALAT 321 (430)
Q Consensus 242 DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~ 321 (430)
||+|+|+ |+|.+++.+.+++.||++++||++++| +|+|++++++++++.+.. .....+.+|++++|++++++.++
T Consensus 237 DEv~~G~-r~g~~~~~~~~~~~pDi~~~gK~l~~G-~p~ga~~~~~~i~~~~~~---~~~~~~~~T~~~~p~~~aaa~a~ 311 (426)
T PRK00062 237 DEVMTGF-RVALGGAQGYYGVTPDLTTLGKIIGGG-LPVGAFGGRREIMEQLAP---LGPVYQAGTLSGNPLAMAAGLAT 311 (426)
T ss_pred eechhcc-ccCCccHHHHhCCCcchHhhhhHhhCC-CcceeeeEHHHHHHhhcc---CCCceecccCcCCHHHHHHHHHH
Confidence 9999999 888777777889999999999999999 799999999999988853 12345778999999999999999
Q ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCcc--------chhHHHHHHHHHHHCCc
Q psy14484 322 LEIFNKDNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQ--------IETFSKKFFVAALKNEL 392 (430)
Q Consensus 322 l~~~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~--------~~~~a~~~~~~l~~~Gv 392 (430)
|+.++++++.++++++.++++++|+++ .+++.+..+++.|.|+.+++. ++... ....+..+++.|+++||
T Consensus 312 L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv 390 (426)
T PRK00062 312 LKLLKEPGFYEELEALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFT-DEPVTNYADAKKSDTERFARFFHAMLDEGV 390 (426)
T ss_pred HHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecceEEEEEe-cCCCcchhhhccccHHHHHHHHHHHHHCCe
Confidence 999987789999999999999999887 566777778999999999987 53211 11234689999999999
Q ss_pred EEeecC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 393 LLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 393 ~~~~~~-~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
++.+.+ +.+++ ++++|++||++++++|++++.++
T Consensus 391 ~v~~~~~~~~~~--~~~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 391 YLAPSQFEAGFV--SAAHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred EeecCCcCceee--eccCCHHHHHHHHHHHHHHHHhh
Confidence 998865 56666 58999999999999999999765
No 78
>KOG1403|consensus
Probab=100.00 E-value=4e-55 Score=377.18 Aligned_cols=397 Identities=22% Similarity=0.339 Sum_probs=333.7
Q ss_pred cCCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhh
Q psy14484 10 KSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSL 89 (430)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 89 (430)
+.+.|+.+.++++. |++|++|++|||++++ +...||+||+|++|...++..... +.++.++...+.+++|...
T Consensus 26 y~sDP~kivRaq~Q---YmfDE~g~~yLDCInN--VaHvghchp~VV~A~~kQmat~~t--N~RFlhd~lv~cA~~l~st 98 (452)
T KOG1403|consen 26 YRSDPLKIVRAQGQ---YMFDEEGTRYLDCINN--VAHVGHCHPEVVRAGAKQMATIST--NNRFLHDELVQCARTLTST 98 (452)
T ss_pred ecCCchhhehhccc---eeeccCcccHHHHhhh--hhhcccCCHHHHHHHHHHHhHhcc--cchhhHHHHHHHHHHHhhc
Confidence 46788888888776 9999999999999999 788999999999999999887553 3467788888999999999
Q ss_pred cCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCe-eEeCC
Q psy14484 90 TQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKT-YIITT 168 (430)
Q Consensus 90 ~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 168 (430)
+| .++.++|+|||+|||++|++++|.++ ++..+|+.+..|||+....+.++...- ..+-..-.+++ +..|.
T Consensus 99 lP-eLsvc~F~NSGSEANDLALRLAR~ft------khqDvItldHAYHGHl~s~mE~SPYKF-~~g~~v~kpd~VHVAPc 170 (452)
T KOG1403|consen 99 LP-ELSVCFFVNSGSEANDLALRLARNFT------KHQDVITLDHAYHGHLQSVMEVSPYKF-NQGGGVAKPDYVHVAPC 170 (452)
T ss_pred CC-CceEEEEecCCchhhHHHHHHHHhhc------ccCceEEEechhccceeeeeeccceec-cCCCCcCCCceeEecCC
Confidence 98 69999999999999999999999987 888999999999999888777776432 22222223344 55678
Q ss_pred CCCCCCCCCCChhHHH---HHHHHHHHHHHHhC---CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEe
Q psy14484 169 PDSRNINKGNSANEIA---RCAIFDLEILLKKN---HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIAD 242 (430)
Q Consensus 169 ~~~~~~~~~~~~~~~~---~~d~~~le~~l~~~---~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~D 242 (430)
|+.+++.+.....+.+ ....+.+++++.+. ...++++|.|. .++-||.+.||++|++.+.+..+.+|.++|.|
T Consensus 171 PDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEs-lQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaD 249 (452)
T KOG1403|consen 171 PDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAES-LQSCGGQIIPPAGYFQAVADAVRSAGGVCIAD 249 (452)
T ss_pred ccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHH-HHhcCCcccCchhHHHHHHHHHhcCCCeEEee
Confidence 9888886633222211 12445666666543 35689999999 99999999999999999999999999999999
Q ss_pred ccccCCCCccc-ccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHH
Q psy14484 243 EIAVGCGRTGK-FFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALAT 321 (430)
Q Consensus 243 Ev~~g~g~~g~-~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~ 321 (430)
|||.||||.|+ .|+++.+++.|||++++|.||+| -|+++++.++++.+.+.. ....+..||++||.+|++++++
T Consensus 250 EVQvGFGRvG~hyWafq~y~fiPDIVtmgKpmGNG-hPVa~VattkeIA~Af~a----tgv~YFNTyGGnPVsCAv~laV 324 (452)
T KOG1403|consen 250 EVQVGFGRVGSHYWAFQTYNFIPDIVTMGKPMGNG-HPVAAVATTKEIAQAFHA----TGVEYFNTYGGNPVSCAVGLAV 324 (452)
T ss_pred hhhhcccccchhhhhhhhhccccchheecccCCCC-CeeeEEeccHHHHHHhcc----ccceehhccCCCchhHHHHHHH
Confidence 99999999997 68999999999999999999999 599999999999988864 2356789999999999999999
Q ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCccc---hhHHHHHHHHHHHC-CcEEee
Q psy14484 322 LEIFNKDNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQI---ETFSKKFFVAALKN-ELLLRP 396 (430)
Q Consensus 322 l~~~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~a~~~~~~l~~~-Gv~~~~ 396 (430)
|+.++.+++.++.++.+++|...|+++ ..++.+.+++|.|+|+++++. .|..+. ...|..+..+|++. +|++..
T Consensus 325 m~v~e~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLV-kD~~tRtP~tk~A~~~v~rlke~y~VLlsa 403 (452)
T KOG1403|consen 325 MRVCEDENLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLV-KDRKTRTPDTKEAHWVVNRLKELYRVLLSA 403 (452)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeee-cccccCCCcHHHHHHHHHHHHHhhhEEEec
Confidence 999999999999999999999999998 688899999999999999998 654322 22366777888877 688875
Q ss_pred c---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 397 I---GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 397 ~---~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
. .+.+.|.|+.+.+++++++++..|.++|.-|
T Consensus 404 DGPh~NilKiKPPmCFneena~e~v~~ld~iLT~m 438 (452)
T KOG1403|consen 404 DGPHRNILKIKPPMCFNEENADEFVLGLDEILTVM 438 (452)
T ss_pred CCCCCceeecCCCcccChhhHHHHHHHHHHHHHHH
Confidence 4 3789999999999999999999999998743
No 79
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=100.00 E-value=6.3e-53 Score=410.60 Aligned_cols=377 Identities=25% Similarity=0.416 Sum_probs=318.2
Q ss_pred CCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhc
Q psy14484 11 SSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLT 90 (430)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 90 (430)
.+.|.++.+++|+ |+||.||++||||.+++++.++||+||+|.+++.++++++.+... ...++...++++.|++..
T Consensus 21 ~~~~~~~~~~~G~---~~~d~~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~ 96 (401)
T PRK00854 21 KPLDVVLTRGEGV---WVWDTDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSR-AFRNDQLAPLYEELAALT 96 (401)
T ss_pred CCCCceEEeeeeC---EEEECCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhcccccc-ccCCHHHHHHHHHHHhhC
Confidence 4567888888877 799999999999999999999999999999999999998765432 455788899999999988
Q ss_pred CCCCCeEEEcCCchHHHHHHHHHHHHhhhh-cCCC-CCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCC
Q psy14484 91 QYKLGHCFYGSDGASAVEVALKMSFHYWYN-KGFL-NKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITT 168 (430)
Q Consensus 91 ~~~~~~v~~~~sgteA~~~al~~~~~~~~~-~g~~-~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (430)
+ .+++++++||++|++.|+++++.+++. +|.+ ++++||+++.+|||++.....++..+..+..+.+...++.++++
T Consensus 97 ~--~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (401)
T PRK00854 97 G--SHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPF 174 (401)
T ss_pred C--CCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCC
Confidence 5 469999999999999999999987432 2332 46789999999999988877777655555555555555556655
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCC
Q psy14484 169 PDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGC 248 (430)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~ 248 (430)
+ |+++|++.+. +++++|++|| +++++|.+.|+++|+++|+++|++||+++|+||+|+|+
T Consensus 175 ~-----------------d~~~le~~i~---~~~~aii~e~-~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~ 233 (401)
T PRK00854 175 G-----------------DAEALEAAIT---PNTVAFLVEP-IQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGL 233 (401)
T ss_pred C-----------------CHHHHHHHhC---CCeEEEEEcc-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCC
Confidence 4 7899999885 5799999999 99999999999999999999999999999999999999
Q ss_pred CCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhc
Q psy14484 249 GRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD 328 (430)
Q Consensus 249 g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~ 328 (430)
|++|..++.+..++.||++++||++++|++|+|++++++++++.+.. ..+..|+++++++++++.++|+.++++
T Consensus 234 g~~g~~~~~~~~g~~~D~~~~~K~l~gg~~~ig~v~~~~~~~~~l~~------~~~~~t~~~~~~~~aa~~a~L~~l~~~ 307 (401)
T PRK00854 234 GRTGKLLAEEHEGIEADVTLIGKALSGGFYPVSAVLSNSEVLGVLKP------GQHGSTFGGNPLACAVARAALKVLTEE 307 (401)
T ss_pred CCCchHhHHhhcCCCCCEEEecccccCCccCeEEEEEcHHHHhcccC------CCCCCCCCcCHHHHHHHHHHHHHHHHc
Confidence 99987666667788999999999999997899999999999887754 346778889999999999999988777
Q ss_pred CHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-CCEEEEeCCC
Q psy14484 329 NILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-GNTVYLMPPY 407 (430)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-~~~lR~~~~~ 407 (430)
+..++++++++++.+.|+++. .+.+..+++.|.++.+.+. .+.. ....+++.|+++||.+.+. ++++||+|++
T Consensus 308 ~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~g~g~~~~i~~~-~~~~----~~~~~~~~L~~~GV~v~~~~~~~lR~~p~~ 381 (401)
T PRK00854 308 GMIENAAEMGAYFLEGLRSIR-SNIVREVRGRGLMLAVELE-PEAG----GARQYCEALKERGLLAKDTHDHTIRLAPPL 381 (401)
T ss_pred CHHHHHHHHHHHHHHHHHhhc-cCceEEEeccceEEEEEEe-cCch----hHHHHHHHHHHCCeEEecCCCCEEEEeCCc
Confidence 789999999999999998872 2334567889999998886 4321 1367999999999999876 4799999999
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q psy14484 408 ILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 408 ~~t~e~i~~~~~~l~~~l~ 426 (430)
.+++++|++++++|++++.
T Consensus 382 ~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 382 VITREQVDWALEQIAKVLA 400 (401)
T ss_pred ccCHHHHHHHHHHHHHHhh
Confidence 9999999999999998864
No 80
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=100.00 E-value=3.2e-52 Score=405.83 Aligned_cols=383 Identities=28% Similarity=0.434 Sum_probs=317.7
Q ss_pred cCCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhh
Q psy14484 10 KSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSL 89 (430)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 89 (430)
+.+.|.++.+++|+ |+||.||++||||.+++++.++||+||+|++++.++++++.+... .+.++...++++.+++.
T Consensus 10 ~~~~~~~~~~~~G~---~~~d~dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~ 85 (400)
T PTZ00125 10 YHPLPVVLKRGKGV---FVWDVEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSR-AFYNDVLGLAEKYITDL 85 (400)
T ss_pred cCCCCccEEeeecC---EEEeCCCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhcccccc-cccCHHHHHHHHHHHhC
Confidence 45678899999888 799999999999999999999999999999999999988765433 23467778888888887
Q ss_pred cCCCCCeEEEcCCchHHHHHHHHHHHHhhhh-cCCC-CCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeC
Q psy14484 90 TQYKLGHCFYGSDGASAVEVALKMSFHYWYN-KGFL-NKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIIT 167 (430)
Q Consensus 90 ~~~~~~~v~~~~sgteA~~~al~~~~~~~~~-~g~~-~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (430)
. +.++++|++||++|++.|+++++.++.. +|.+ ++++||+++.+|||.+...+..++...+...+.+...+...++
T Consensus 86 ~--~~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (400)
T PTZ00125 86 F--GYDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVD 163 (400)
T ss_pred C--CCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeC
Confidence 6 5679999999999999999999865322 2222 4678999999999999888887764433333333333333443
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC
Q psy14484 168 TPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVG 247 (430)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g 247 (430)
++ |++++++.++ .+++++|++|| +++++|.+.++++|+++|.++|++||+++|+||+|+|
T Consensus 164 ~~-----------------d~~~le~~l~--~~~~~~v~~ep-~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g 223 (400)
T PTZ00125 164 YN-----------------DVEALEKLLQ--DPNVAAFIVEP-IQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTG 223 (400)
T ss_pred CC-----------------CHHHHHHHhC--CCCeEEEEEcC-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC
Confidence 33 8899999986 35799999999 9999999999999999999999999999999999999
Q ss_pred CCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh
Q psy14484 248 CGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK 327 (430)
Q Consensus 248 ~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~ 327 (430)
+|++|..+..+..++.||++++||++++|++|+|++++++++++.+.. ..+..|++++++.++++.++|+.+++
T Consensus 224 ~g~~G~~~~~~~~~~~pd~~~~sK~l~~g~~~ig~v~~~~~~~~~~~~------~~~~~t~~~~~~~~~aa~~~l~~i~~ 297 (400)
T PTZ00125 224 LGRTGKLLAHDHEGVKPDIVLLGKALSGGLYPISAVLANDDVMLVIKP------GEHGSTYGGNPLACAVAVEALEVLKE 297 (400)
T ss_pred CCccchhhHHHhcCCCCCEEEEcccccCCCcCcEEEEEcHHHHhhccC------CCCCCCCCcCHHHHHHHHHHHHHHHh
Confidence 999998777777888999999999999986799999999999887754 23567889999999999999998877
Q ss_pred cCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-CEEEEeC
Q psy14484 328 DNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMP 405 (430)
Q Consensus 328 ~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-~~lR~~~ 405 (430)
+++.++++++.++++++|+++ ...+.+..+++.|.++++.+. .... ..+..+++.|+++||.+.|.+ +.+||+|
T Consensus 298 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~g~~~~v~~~-~~~~---~~~~~~~~~l~~~Gv~v~~~~~~~lRi~~ 373 (400)
T PTZ00125 298 EKLAENAQRLGEVFRDGLKELLKKSPWVKEIRGKGLLNAIVFD-HSDG---VNAWDLCLKLKENGLLAKPTHDNIIRFAP 373 (400)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEecccEEEEEEEc-cCcc---hHHHHHHHHHHHCCeEEeecCCCEEEEEC
Confidence 788899999999999999887 455666667889999998876 4211 124678999999999999865 7999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 406 PYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 406 ~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
++.++++++++++++|++++.++
T Consensus 374 ~~~~~~~~i~~~l~~l~~~l~~~ 396 (400)
T PTZ00125 374 PLVITKEQLDQALEIIKKVLKSF 396 (400)
T ss_pred CccCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998875
No 81
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=5.2e-52 Score=404.12 Aligned_cols=377 Identities=32% Similarity=0.523 Sum_probs=319.0
Q ss_pred cCCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhh
Q psy14484 10 KSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSL 89 (430)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 89 (430)
+.+.|.++.+++|+ ++||.||++||||.+++++++|||+||++.+++++++.+..+.. ..+.++...+++++|++.
T Consensus 18 ~~~~~~~~~~~~G~---~~~d~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~la~~l~~~ 93 (396)
T PRK02627 18 YGRLPIAFVRGEGA---RLWDDDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTS-NLYYIEPQEELAEKLVEL 93 (396)
T ss_pred ccCCCceEEeeeeC---EEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhccccc-cccCCHHHHHHHHHHHhh
Confidence 34568899999888 79999999999999999999999999999999999998764332 246688899999999998
Q ss_pred cCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC
Q psy14484 90 TQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP 169 (430)
Q Consensus 90 ~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (430)
. +.+++++++||+||++.|+++++.+....+. ++++|++++++|||++.....+++.+.++..+.++..+...++++
T Consensus 94 ~--~~~~v~~~~gg~eA~~~al~~a~~~~~~~~~-~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (396)
T PRK02627 94 S--GMDKVFFCNSGAEANEAAIKLARKYGHKKGI-EKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFN 170 (396)
T ss_pred c--CCCEEEECCCcHHHHHHHHHHHHHHhcccCC-CCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCC
Confidence 6 5689999999999999999999876522111 237899999999999988888777655544444444444444433
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCC
Q psy14484 170 DSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG 249 (430)
Q Consensus 170 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g 249 (430)
|++++++++. +++++|++|| +++++|+.+++++++++|.++|++||+++|+||+|+||+
T Consensus 171 -----------------d~~~l~~~i~---~~~~~vii~p-~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g 229 (396)
T PRK02627 171 -----------------DIEALKAAIT---DKTAAVMLEP-IQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMG 229 (396)
T ss_pred -----------------CHHHHHHhcC---CCeEEEEEec-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCC
Confidence 7899998884 5799999999 999999889999999999999999999999999999999
Q ss_pred CcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcC
Q psy14484 250 RTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDN 329 (430)
Q Consensus 250 ~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~ 329 (430)
++|.+++++..++.||+++|||++++| +|+|++++++++++.+.. ..+..|+++++++++++.++|+.+++++
T Consensus 230 ~~g~~~~~~~~~~~pdi~t~sK~~~~G-~rig~~~~~~~~~~~~~~------~~~~~t~~~~~~~~~aa~~~l~~~~~~~ 302 (396)
T PRK02627 230 RTGKLFAYQHYGIEPDIMTLAKGLGGG-VPIGAVLAKEKVADVFTP------GDHGSTFGGNPLACAAALAVIEIIEEEG 302 (396)
T ss_pred ccCceeeehhcCCCCCEEEEcchhhCC-cccEEEEEcHHHHhccCC------CCCCCCCCCCHHHHHHHHHHHHHHhhcc
Confidence 998777777778899999999999988 799999999998887754 3467899999999999999999887778
Q ss_pred HHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-CEEEEeCCC
Q psy14484 330 ILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPY 407 (430)
Q Consensus 330 ~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-~~lR~~~~~ 407 (430)
+.++++++.++++++|+++ ..++.+..+++.|.++++++. .+ +.++++.|+++||++.+++ +.+||+|++
T Consensus 303 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~i~~~-~~-------~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~ 374 (396)
T PRK02627 303 LLENAAEVGEYLRAKLRELLEKYPGIKEVRGLGLMIGIELD-RP-------AAEIVKKALEKGLLINVTGDNVLRLLPPL 374 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeeeeccCcEEEEEEec-Cc-------HHHHHHHHHHCCeEEeecCCCEEEEECCc
Confidence 8999999999999999887 556666677888999888875 31 3679999999999999875 789999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHhh
Q psy14484 408 ILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 408 ~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
.++++++++++++|++++++++
T Consensus 375 ~~~~~~i~~~~~~l~~~l~~~~ 396 (396)
T PRK02627 375 IISKEEIDEAVDRLEEVLKELL 396 (396)
T ss_pred ccCHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999998764
No 82
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=100.00 E-value=1.9e-51 Score=402.61 Aligned_cols=392 Identities=36% Similarity=0.579 Sum_probs=325.1
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
+.|.++.+++|+ ++||.||++||||.+|+++.++||+||+|++++.+++.+........+.++...++++.|++.++
T Consensus 17 ~~~~~~~~~~g~---~~~d~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 93 (413)
T cd00610 17 PYPLVIVRAEGA---YLYDVDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSLGFFYNEPAVELAELLLALTP 93 (413)
T ss_pred CCCceEEeeecC---EEEeCCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccCcccCCHHHHHHHHHHHHhCC
Confidence 578899998887 79999999999999999999999999999999999997765443322357889999999999997
Q ss_pred CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC
Q psy14484 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS 171 (430)
Q Consensus 92 ~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (430)
.+.++++|++||++|++.|+++++.++ ++++|++++++|||++...+..++.+.++..+.+...++..+++++.
T Consensus 94 ~~~~~v~~~~sgsea~~~al~~~~~~~------~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (413)
T cd00610 94 EGLDKVFFVNSGTEAVEAALKLARAYT------GRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYR 167 (413)
T ss_pred CCCCEEEEcCcHHHHHHHHHHHHHHHc------CCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCcc
Confidence 678999999999999999999998764 78899999999999998888877665455444444445555555421
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCc
Q psy14484 172 RNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRT 251 (430)
Q Consensus 172 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~ 251 (430)
.+.. .....|++.|++.+++++++++++++|| +++++|...++++++++|.++|++||+++|+||+|+|+++.
T Consensus 168 ~~~~------~~~~~d~~~l~~~l~~~~~~~~~vi~~p-~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~ 240 (413)
T cd00610 168 YRPP------AELADDLEALEEALEEHPEEVAAVIVEP-IQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRT 240 (413)
T ss_pred ccch------hhHHHHHHHHHHHHhcCCCCEEEEEEcc-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC
Confidence 1110 1112388999999986556899999999 99999999999999999999999999999999999999998
Q ss_pred ccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHH
Q psy14484 252 GKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNIL 331 (430)
Q Consensus 252 g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~ 331 (430)
|..+.++.+++.||++++||++++| +|+|++++++++++.+. .....+.+|+++++++++++.++|+.++++++.
T Consensus 241 g~~~~~~~~~~~~d~~t~sK~l~~g-~~~g~~~~~~~~~~~~~----~~~~~~~~t~~~~~~~~~a~~a~l~~l~~~~~~ 315 (413)
T cd00610 241 GKMFAFEHFGVEPDIVTLGKGLGGG-LPLGAVLGREEIMDAFP----AGPGLHGGTFGGNPLACAAALAVLEVLEEEGLL 315 (413)
T ss_pred cchhhHhhcCCCCCeEEEcccccCc-cccEEEEEcHHHHHhhc----cCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHH
Confidence 8777777788899999999999998 79999999999988761 123457789999999999999999988878899
Q ss_pred HHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCcc---chhHHHHHHHHHHHCCcEEeec-CCEEEEeCC
Q psy14484 332 QRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQ---IETFSKKFFVAALKNELLLRPI-GNTVYLMPP 406 (430)
Q Consensus 332 ~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~a~~~~~~l~~~Gv~~~~~-~~~lR~~~~ 406 (430)
+++++++++++++|+++ ...+.+..+++.|.++++.+. +.... ....+..+++.|.++||.+.+. ++.+|++++
T Consensus 316 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~~~~lR~~~~ 394 (413)
T cd00610 316 ENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELV-KDRATKPPDKELAAKIIKAALERGLLLRPSGGNVIRLLPP 394 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEe-cCCCcCCcchHHHHHHHHHHHHCCeEEeecCCCEEEEECC
Confidence 99999999999999987 334555567788999999887 53110 0122467999999999999987 489999999
Q ss_pred CCCCHHHHHHHHHHHHHHH
Q psy14484 407 YILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 407 ~~~t~e~i~~~~~~l~~~l 425 (430)
+.+|+++|++++++|++++
T Consensus 395 ~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 395 LIITEEEIDEGLDALDEAL 413 (413)
T ss_pred CcCCHHHHHHHHHHHHHhC
Confidence 9999999999999998763
No 83
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=7.1e-51 Score=392.27 Aligned_cols=365 Identities=27% Similarity=0.412 Sum_probs=302.9
Q ss_pred CCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhc
Q psy14484 11 SSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLT 90 (430)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 90 (430)
.+.|.++.+++|+ |+||.||++||||.+++++.+||| ||+|++|+.+++++..... ....++...++++.+...
T Consensus 9 ~~~~~~~~~~~G~---~l~d~dg~~~lD~~s~~~~~~lG~-~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~la~~l~~~- 82 (375)
T PRK04260 9 KRAAIEFVKAEGN---YLIDTDGKKYLDFSSGIGVTNLGF-HPQVQQALQKQAGLIWHSP-NLYLNSLQEEVAQKLIGD- 82 (375)
T ss_pred CCCCceEEEeeeC---EEEeCCCCEEEECCCCcccccCCC-CHHHHHHHHHHHHhcCccc-CccCCHHHHHHHHHHhcC-
Confidence 4467889999888 799999999999999999999999 9999999999998754322 234456666777666432
Q ss_pred CCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC
Q psy14484 91 QYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD 170 (430)
Q Consensus 91 ~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (430)
....++|++||+||++.|+++++.++ ++++||+++++|||++..+...++.+.++..+.+....+...++
T Consensus 83 --~~~~~~~~~SGseA~~~Al~~ar~~~------~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 152 (375)
T PRK04260 83 --KDYLAFFCNSGAEANEAAIKIARKAT------GKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIF-- 152 (375)
T ss_pred --cCCEEEEcCccHHHHHHHHHHHHHhc------CCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCC--
Confidence 22357999999999999999998764 77889999999999998888777655444444332222222222
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCC
Q psy14484 171 SRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGR 250 (430)
Q Consensus 171 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~ 250 (430)
+|++.+++++. +++++|++|| +++++|++.++++|++++.++|+++|+++|+||+|+|+++
T Consensus 153 ---------------~dl~~l~~~l~---~~~a~vi~e~-v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~ 213 (375)
T PRK04260 153 ---------------NDLNSVKALVN---KNTAAVMLEL-VQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGR 213 (375)
T ss_pred ---------------CCHHHHHHhcC---CCeEEEEECC-eECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCc
Confidence 27889998874 5789999999 9999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCH
Q psy14484 251 TGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNI 330 (430)
Q Consensus 251 ~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~ 330 (430)
+|.++.++..++.||+++|||++++| +|+|++++++++.+.+.. ..+.+|+++++++++++.++|+.++.+++
T Consensus 214 ~g~~~~~~~~~~~pdi~t~sK~l~~G-~~ig~~~~~~~~~~~~~~------~~~~~t~~~~~~~~~aa~a~l~~~~~~~~ 286 (375)
T PRK04260 214 TGKLYAFEHYGIEPDIFTLAKGLANG-VPVGAMLAKSSLGGAFGY------GSHGSTFGGNKLSMAAASATLDIMLTAGF 286 (375)
T ss_pred ccchhhhHhhCCCCCEEEecccccCC-cceEEEEEcHHHHhhcCC------CCCCCCCCcCHHHHHHHHHHHHHHHhhHH
Confidence 88766766778999999999999988 799999999999887754 24678999999999999999998887789
Q ss_pred HHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-CEEEEeCCCC
Q psy14484 331 LQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYI 408 (430)
Q Consensus 331 ~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-~~lR~~~~~~ 408 (430)
.+++++..+++++.+.++ ..++.+..+++.|+++++++. .+ +.++.+.|+++||++.+.+ +.+|++|++.
T Consensus 287 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~-~~-------~~~~~~~l~~~Gi~v~~~~~~~lR~~~~~~ 358 (375)
T PRK04260 287 LEQALENGNYLQEQLQKALQDKETVTTVRGLGYMIGIETT-AD-------LSQLVEAARDKGLIVLTAGTNVIRLLPPLT 358 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeeEEeccceEEEEEec-Cc-------HHHHHHHHHhCCCEEecCCCCEEEEcCCCc
Confidence 999999999999999876 556656677889999999886 32 3679999999999998765 7899999999
Q ss_pred CCHHHHHHHHHHHHHHH
Q psy14484 409 LNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 409 ~t~e~i~~~~~~l~~~l 425 (430)
++++++++++++|++++
T Consensus 359 ~t~~~i~~~l~~l~~~~ 375 (375)
T PRK04260 359 LTKEEIEQGIAILSEVF 375 (375)
T ss_pred cCHHHHHHHHHHHHHhC
Confidence 99999999999998763
No 84
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=100.00 E-value=9e-51 Score=395.36 Aligned_cols=370 Identities=17% Similarity=0.245 Sum_probs=289.5
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
..|+++.+++|+ |+||.||++||||.+++|+.++||+||+|.+|++++++++.. ....+....+++++|.+.+|
T Consensus 29 ~~p~~~~~~~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~---~~~~~~~~~~la~~l~~~~p 102 (431)
T PRK06209 29 LAPGFIQRGSGA---HVWDVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCN---FTRPSAIELDAAESFLELID 102 (431)
T ss_pred CCCeEEEeccCC---EEEeCCCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCcC---CCCCCHHHHHHHHHHHHhCC
Confidence 567899999888 899999999999999999999999999999999999988642 23455566689999999987
Q ss_pred CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEE-cCCCCCcchhhhccCC-CccchhhhhccCCCeeEeCCC
Q psy14484 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICL-QNSYHGETLGALAVTN-IQSFKEIYTSLLNKTYIITTP 169 (430)
Q Consensus 92 ~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~-~~~yhg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 169 (430)
..++++|++||+||++.|+|+++.++ +|.+|+.+ ..+|||........+. ....... ... ....++
T Consensus 103 -~~~~v~f~~sGseA~e~AlklAr~~t------gr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~---~~~--~~~~~~ 170 (431)
T PRK06209 103 -GADMVKFCKNGSDATSAAVRLARAYT------GRDLVARCADHPFFSTDDWFIGTTPMSAGIPAS---VSA--LTVTFR 170 (431)
T ss_pred -ccceEEEecCHHHHHHHHHHHHHHHh------CCCeEEEeccCccccccccccccCCCCCCCChh---Hhc--cccccC
Confidence 46899999999999999999999986 78889888 5677763211110000 0000000 000 011122
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCC
Q psy14484 170 DSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG 249 (430)
Q Consensus 170 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g 249 (430)
.+|+++++++++++++++++|++|| ++++ .|+++|+++|+++|++||++||+|||++|++
T Consensus 171 ---------------~~d~~~l~~~l~~~~~~~aavi~Ep-v~g~----~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~ 230 (431)
T PRK06209 171 ---------------YNDIASLEALFEDHPGRIACVILEP-ATAD----EPQDGFLHEVRRLCHENGALFILDEMITGFR 230 (431)
T ss_pred ---------------CCCHHHHHHHHHhCCCCEEEEEEcc-ccCC----CCCHHHHHHHHHHHHHcCCEEEEEcccccCC
Confidence 2488999999987667899999999 8765 7889999999999999999999999999997
Q ss_pred CcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHh--hhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh
Q psy14484 250 RTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNS--IYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK 327 (430)
Q Consensus 250 ~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~--~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~ 327 (430)
+.+ .+..+.+++.||++++||+++|| +|+|++++++++++. +......+.+.+++|+++||++++++.++|+++++
T Consensus 231 ~~~-~g~~~~~gv~PDi~t~gK~lggG-~p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~ 308 (431)
T PRK06209 231 WHM-RGAQKLYGIVPDLSCFGKALGNG-FAVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRD 308 (431)
T ss_pred cCc-chhhHHhCCCcceeeehhhhcCC-cccEEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhc
Confidence 642 22334579999999999999999 699999999999886 32211234567899999999999999999999988
Q ss_pred cCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCC---ccchhHHHHHHHHHHHCCcEEeecCCEEEE
Q psy14484 328 DNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDP---EQIETFSKKFFVAALKNELLLRPIGNTVYL 403 (430)
Q Consensus 328 ~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~a~~~~~~l~~~Gv~~~~~~~~lR~ 403 (430)
+++.++++++++++++.|+++ .+++....+++.|.++.+.+. ... .........+.+.|+++|+++.+ +
T Consensus 309 ~~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~Gi~~p~------l 381 (431)
T PRK06209 309 EDVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTYS-TLDGNGQPSQAFRTLFLQETIRRGVLMPS------L 381 (431)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEEe-cCCcccCCcHHHHHHHHHHHHHCCccccc------c
Confidence 899999999999999999887 567766677888888877764 321 11222334788889999998732 3
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 404 MPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 404 ~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+++..+|+++|++++++|++++.++
T Consensus 382 ~is~~ht~~dId~~l~~l~~~l~~~ 406 (431)
T PRK06209 382 VVSYAHGDADIERTIDAVHGALGVY 406 (431)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHH
Confidence 4467889999999999999999875
No 85
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=100.00 E-value=6.8e-47 Score=366.12 Aligned_cols=371 Identities=34% Similarity=0.545 Sum_probs=303.1
Q ss_pred CCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhc
Q psy14484 11 SSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLT 90 (430)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 90 (430)
.+.|.++.+++|. +++|.||++||||.+++|+++|||++|.|.+++.+++.+..... ..+.++...++++.+++.+
T Consensus 7 ~~~~~~~~~~~g~---~~~~~~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~l~~~la~~~ 82 (379)
T TIGR00707 7 GRLPVKIVRGKGA---YVYDVNGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVS-NLYYTEPQEELAEKLVEHS 82 (379)
T ss_pred CCCCccEEEeecC---EEEeCCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccc-cccCCHHHHHHHHHHHhhC
Confidence 3578899999887 79999999999999999999999999999999999998764332 2456788999999999999
Q ss_pred CCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC
Q psy14484 91 QYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD 170 (430)
Q Consensus 91 ~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (430)
+.+++++++||++|++.++++++.++.+.| +++++|++++++|||+...+...+....+...+.++..+..+++++
T Consensus 83 --g~~~~~~~~sg~~a~~~a~~~~~~~~~~~~-~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 158 (379)
T TIGR00707 83 --GADRVFFCNSGAEANEAALKLARKYTGDKG-KEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYN- 158 (379)
T ss_pred --CCCEEEEeCCcHHHHHHHHHHHHHHhhccC-CCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCC-
Confidence 456999999999999999998876542222 2368999999999999887777666544332333333333344332
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCC
Q psy14484 171 SRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGR 250 (430)
Q Consensus 171 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~ 250 (430)
|++++++.+. +++++|+++| +++++|..+++.+++++|.++|+++|+++|+||+|++|++
T Consensus 159 ----------------d~~~l~~~~~---~~~~~v~~~p-~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~ 218 (379)
T TIGR00707 159 ----------------DIESLKKAID---DETAAVIVEP-IQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGR 218 (379)
T ss_pred ----------------CHHHHHHHhh---hCeeEEEEEc-cccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence 7889998886 4688999999 9999997778999999999999999999999999999988
Q ss_pred cccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCH
Q psy14484 251 TGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNI 330 (430)
Q Consensus 251 ~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~ 330 (430)
.|..+.+...++.||+++|||++++| +|+|++++++++++.+.. ..+..+++.++++++++.++|+.++.+++
T Consensus 219 ~g~~~~~~~~~~~~d~~t~sK~~~~G-~riG~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~aa~aaL~~~~~~~~ 291 (379)
T TIGR00707 219 TGKFFAYEHYGIEPDIITLAKGLGGG-VPIGATLAKEEVAEAFTP------GDHGSTFGGNPLACAAALAVLEVIEKERL 291 (379)
T ss_pred cchhhhHHhcCCCCCEEEEcccccCC-cccEEEEEcHHHHhhhcC------CCCCCCCCCCHHHHHHHHHHHHHHHhhhH
Confidence 87655555567889999999999988 799999999999888765 23556788899999999999998877778
Q ss_pred HHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-CEEEEeCCCC
Q psy14484 331 LQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYI 408 (430)
Q Consensus 331 ~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-~~lR~~~~~~ 408 (430)
.++++++.++++++|+++ ...+ ...+++.|.++++.+. ++ +.++++.|+++||.+.|.+ +++|+++++.
T Consensus 292 ~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~g~~~~~~~~-~~-------~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~ 362 (379)
T TIGR00707 292 LENVKEKGDYFKERLEELGKNYP-NKEVRGKGLMLGIELE-AP-------CKDIVKKALEKGLLVNCAGPKVLRFLPPLI 362 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCC-CCccccCceEEEEEec-Cc-------HHHHHHHHHHCCcEEeeCCCCEEEEECCCc
Confidence 899999999999999876 3332 2345567888888776 32 3678999999999999876 7999999999
Q ss_pred CCHHHHHHHHHHHHHHH
Q psy14484 409 LNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 409 ~t~e~i~~~~~~l~~~l 425 (430)
++++++++++++|++++
T Consensus 363 ~t~~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 363 ITKEEIDEAVSALEEAI 379 (379)
T ss_pred CCHHHHHHHHHHHHHhC
Confidence 99999999999998753
No 86
>KOG1405|consensus
Probab=100.00 E-value=1.7e-45 Score=324.12 Aligned_cols=390 Identities=23% Similarity=0.312 Sum_probs=303.8
Q ss_pred EEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHH-HhhccccccC---CCCC-HHHHHHHHHHHhhcC
Q psy14484 17 IRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQ-LNKLEHVMLS---NLTH-KPVIKLSEKLSSLTQ 91 (430)
Q Consensus 17 ~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~-~~~~~~~~~~---~~~~-~~~~~l~~~l~~~~~ 91 (430)
+.--+-+.|+|++|.|||.+||..+.+.+.++||+||.+.+++++- .... ...++ .++. +..+.+.+.+.+..|
T Consensus 59 ~~dYEkS~GNYlvDvDGN~lLDvYsQIsSvplGYn~P~LvK~a~~p~~~~~-lvnRPALg~fP~kd~~~~l~~~ll~~AP 137 (484)
T KOG1405|consen 59 FVDYEKSIGNYLVDVDGNRLLDVYSQISSVPLGYNNPALVKAAQQPQNATM-LVNRPALGNFPPKDFAEKLRQSLLSIAP 137 (484)
T ss_pred ehhhhhhcCceEEecCCCeeehhhhhhcccccCCCCHHHHHHhcChHHHHH-HhccccccCCChhhHHHHHHHHHHhhCc
Confidence 3334455789999999999999999999999999999999888752 2211 11111 2222 333445455556667
Q ss_pred CCCCeEEEcCCchHHHHHHHHHHHHhhhhc--CC----------------C--CCcEEEEEcCCCCCcchhhhccCCCcc
Q psy14484 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNK--GF----------------L--NKKKFICLQNSYHGETLGALAVTNIQS 151 (430)
Q Consensus 92 ~~~~~v~~~~sgteA~~~al~~~~~~~~~~--g~----------------~--~~~~vl~~~~~yhg~~~~~~~~~~~~~ 151 (430)
-+.+.|.+.-+|+.||+.|++.+.-|++++ |. | +.-.|+.|.++|||++.++.+.+....
T Consensus 138 KG~~~v~tm~cGs~aNEnA~K~afiwy~~k~rg~~~~s~~e~eScm~n~aPg~P~lsvlsF~gaFHGR~~g~lstT~SKp 217 (484)
T KOG1405|consen 138 KGQKQVITMLCGSCANENAYKTAFIWYRAKERGQAGFSAEELESCMINQAPGAPDLSVLSFKGAFHGRTFGSLSTTHSKP 217 (484)
T ss_pred chHHHHHHHhccccccHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCCCCceeeeeeccccccccccccccccCcc
Confidence 777899999999999999999999887643 21 2 356799999999999999999888766
Q ss_pred chhhhhccCCCeeEeCCCCCCCCC-CCCChh-HHHHHHHHHHHHHHHhCC---CCeEEEEEccccccCCCcccCChHHHH
Q psy14484 152 FKEIYTSLLNKTYIITTPDSRNIN-KGNSAN-EIARCAIFDLEILLKKNH---NKIAAIIIEPLVQCAGGMIMYDSIYLK 226 (430)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~d~~~le~~l~~~~---~~~~~vi~ep~v~~~~G~~~~~~~~l~ 226 (430)
.++.-.|- .++...++|.....- .....+ ...+.+++++|+.|.++. ..++++|+|| ++++||....+++|++
T Consensus 218 IHKldiPa-FdWPiA~fP~ykYPLdenv~~N~ked~~Cl~~Ve~li~~~~~k~~pVaaiIvEP-IQsEGGDnhaSp~Ff~ 295 (484)
T KOG1405|consen 218 IHKLDIPA-FDWPIAPFPRYKYPLDENVAENKKEDQGCLAEVEDLIVKYRKKKKPVAAIIVEP-IQSEGGDNHASPDFFR 295 (484)
T ss_pred ccccCCCC-CCCCCCCCccccCChhhhhhhhhhhhhhHHHHHHHHHHHHhhcCCCeEEEEeec-hhccCCCccCCHHHHH
Confidence 66533332 233344555433221 011111 123457899999998883 4799999999 9999999999999999
Q ss_pred HHHHHHHhcCCEEEEeccccCCCCcccccccccCCCC--CceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccc
Q psy14484 227 LVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIW--PDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLH 304 (430)
Q Consensus 227 ~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~--~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~ 304 (430)
.|+++|+|||+.+|+||||||.|-||+.|+.+++++. ||++||||-+..|+ .+-.++++ + ..++.+
T Consensus 296 kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD~vTFSKK~q~gG-----ffh~~~fr----p---n~pYri 363 (484)
T KOG1405|consen 296 KLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPDVVTFSKKFQTGG-----FFHDEEFR----P---NEPYRI 363 (484)
T ss_pred HHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCCccceehhhhhhcCc-----cccCcccC----C---CchHHH
Confidence 9999999999999999999999999999999999985 89999999765431 33333332 2 224557
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHch-hcCCC-eeeEeecceEEEEEEeecCCccchhHHHH
Q psy14484 305 SHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSL-ITHPK-IINFRQKGMIWAFDVIIEDPEQIETFSKK 382 (430)
Q Consensus 305 ~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~a~~ 382 (430)
..||.+.|.-..-..++++.++++++.+.++..++.|..+|.+| ..+|. +...+|+|.|++++++ ++. .-+.
T Consensus 364 fNTWmGdP~k~lll~~vv~~I~~~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~d~p-s~~-----~Rdk 437 (484)
T KOG1405|consen 364 FNTWMGDPSKNLLLEEVVQEIKREDLLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAWDCP-SGS-----IRDK 437 (484)
T ss_pred hhhhcCChHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceEEEEeCC-ChH-----HHHH
Confidence 78999999988888888999999999999999999999999999 67786 6678999999999998 532 2367
Q ss_pred HHHHHHHCCcEEeecC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 383 FFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 383 ~~~~l~~~Gv~~~~~~-~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
++..++-+|+.+..|| ..|||+|++..++-+.+.++++|.+++..
T Consensus 438 ~i~~~~~nGv~~GGCg~~siRfRPsLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 438 LILIARLNGVNLGGCGDKSIRFRPSLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred HHHHHHHcCceecccccceeeeccceeehhhhHHHHHHHHHHHhcc
Confidence 9999999999999887 68999999999999999999999998865
No 87
>PRK07505 hypothetical protein; Provisional
Probab=100.00 E-value=2.2e-35 Score=286.98 Aligned_cols=353 Identities=16% Similarity=0.143 Sum_probs=245.0
Q ss_pred CCCceeEEeecCCceeEEEECCCCEEEecccccccccCC-CCCHHHHHHHHHHHhhcc--cc-cc-CCCCCHHHHHHHHH
Q psy14484 11 SSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFG-HSNSYINKALKNQLNKLE--HV-ML-SNLTHKPVIKLSEK 85 (430)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~--~~-~~-~~~~~~~~~~l~~~ 85 (430)
.++++++.+++|. ++||.||++||||.+ +.++| |+||+|++|+.+++++.+ .. .. ....++..+++++.
T Consensus 26 ~~~~~~~~~~~G~---~~~d~~g~~~ld~~s---~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~ 99 (402)
T PRK07505 26 GLNGLTVGEREGI---LITLADGHTFVNFVS---CSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEA 99 (402)
T ss_pred ccccceeeccCCc---cEEecCCceEEEeec---CCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHH
Confidence 3455788888887 799999999999988 36899 999999999999998753 11 11 12456788999999
Q ss_pred HHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeE
Q psy14484 86 LSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYI 165 (430)
Q Consensus 86 l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (430)
|++.++. +.++++||++|++.++++++... .+ +++.++|+++.+||+....... ... ...++..
T Consensus 100 la~~~~~---~~~~~~sG~~a~~~ai~~~~~~~-~~--~~~~~vi~~~~~~H~s~~~~~~------~~~----~~~~v~~ 163 (402)
T PRK07505 100 LSELFGA---SVLTFTSCSAAHLGILPLLASGH-LT--GGVPPHMVFDKNAHASLNILKG------ICA----DETEVET 163 (402)
T ss_pred HHHHhCC---CEEEECChHHHHHHHHHHHHhcc-cC--CCCCCEEEEchhhhHhHHhhhh------hhh----cCCeEEE
Confidence 9999863 67777799999999999876421 11 1456788999999985321111 110 0123344
Q ss_pred eCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccc
Q psy14484 166 ITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIA 245 (430)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~ 245 (430)
++++ |++++++++++ ....++++|| ++++ |.+.+ +++|.++|++||++||+||+|
T Consensus 164 ~~~~-----------------d~~~l~~~~~~--~~~~~vl~~p-~~~~-G~~~~----~~~i~~l~~~~~~~li~DEa~ 218 (402)
T PRK07505 164 IDHN-----------------DLDALEDICKT--NKTVAYVADG-VYSM-GGIAP----VKELLRLQEKYGLFLYIDDAH 218 (402)
T ss_pred eCCC-----------------CHHHHHHHHhc--CCCEEEEEec-cccc-CCcCC----HHHHHHHHHHcCCEEEEECcc
Confidence 5443 88999998863 4578889999 8766 54666 899999999999999999998
Q ss_pred --cCCCCcccccccccCCC-CCcee----eeecccCCCccccEEEEE-cHHHHHhhhccCCcccccccCCCCC--CHHHH
Q psy14484 246 --VGCGRTGKFFACEHAEI-WPDFL----CLSKGITGGYLPLSLVMT-TDKIYNSIYYKNNINIFLHSHSYSG--NPLAC 315 (430)
Q Consensus 246 --~g~g~~g~~~~~~~~~~-~~d~~----~~sK~l~gG~~~ig~~~~-~~~~~~~~~~~~~~~~~~~~~t~~~--~~~~~ 315 (430)
++++++|..+..+..+. .||.+ ++||+++++ .|+++. ++++.+.+.. ..+..||++ +++++
T Consensus 219 ~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~---Gg~~~~~~~~~~~~~~~------~~~~~t~~~~~~~~a~ 289 (402)
T PRK07505 219 GLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS---GGVIMLGDAEQIELILR------YAGPLAFSQSLNVAAL 289 (402)
T ss_pred cccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc---CeEEEeCCHHHHHHHHH------hCCCceeCCCCCHHHH
Confidence 46788887666666676 57744 799998864 256654 6788777764 234455544 45788
Q ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEe
Q psy14484 316 CAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLR 395 (430)
Q Consensus 316 ~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~ 395 (430)
+++.++++.+.++.+.+... ++++.++.+... ....+++.+.++..... .+ ...+..+++.|+++||++.
T Consensus 290 aa~~a~l~~~~~~~~~~~~~----~l~~~~~~~~~~-~~~~~~g~~~~i~~~~~-~~----~~~~~~~~~~l~~~Gi~v~ 359 (402)
T PRK07505 290 GAILASAEIHLSEELDQLQQ----KLQNNIALFDSL-IPTEQSGSFLPIRLIYI-GD----EDTAIKAAKQLLDRGFYTS 359 (402)
T ss_pred HHHHHHHHHHhccCcHHHHH----HHHHHHHHHHHH-HHhcCCCCCCCEEEEEe-CC----HHHHHHHHHHHHHCCCeEe
Confidence 88888888665544433222 223333222110 00122444444433222 11 1124679999999999998
Q ss_pred ec-------C-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 396 PI-------G-NTVYLMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 396 ~~-------~-~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
+. + +++||+|++.+|++|+++++++|++++.+-+
T Consensus 360 ~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~~~ 401 (402)
T PRK07505 360 PVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILDEGL 401 (402)
T ss_pred eecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHHhhc
Confidence 64 2 5899999999999999999999999988654
No 88
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=8.1e-35 Score=286.53 Aligned_cols=351 Identities=14% Similarity=0.169 Sum_probs=254.9
Q ss_pred eeEEeecCCceeEEEECCCCEEEecccccccccCCC-CCHHHHHHHHHHHhhcccccc----CCCCCHHHHHHHHHHHhh
Q psy14484 15 LVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGH-SNSYINKALKNQLNKLEHVML----SNLTHKPVIKLSEKLSSL 89 (430)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~----~~~~~~~~~~l~~~l~~~ 89 (430)
.++.+++|. +++ .+|++|+||.++. ++|. +||+|++++.+++++++..+. ++++++.+.++++.|++.
T Consensus 94 ~~~~~~~G~---~i~-~~G~~~id~~s~~---~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~ 166 (481)
T PLN02822 94 PVLESAAGP---HTI-INGKDVVNFASAN---YLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKF 166 (481)
T ss_pred CceecCCCC---eEE-ECCceEEEeECCC---cCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHH
Confidence 366666665 788 7999999999874 4454 599999999999998654221 346678899999999999
Q ss_pred cCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC
Q psy14484 90 TQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP 169 (430)
Q Consensus 90 ~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (430)
++ ..+.++|++|++ ++..++++.. ++..+|++++.||+....+..+++. ..++++++
T Consensus 167 ~~-~~~~i~~s~G~~-a~~sai~a~~---------~~gd~Ii~d~~~H~s~~~~~~ls~~------------~~~~~~~n 223 (481)
T PLN02822 167 LG-TPDSILYSYGLS-TIFSVIPAFC---------KKGDIIVADEGVHWGIQNGLYLSRS------------TIVYFKHN 223 (481)
T ss_pred hC-CCCEEEECCHHH-HHHHHHHHhC---------CCCCEEEEeCCccHHHHHHHHHcCC------------eEEEECCC
Confidence 97 557788876665 7788888654 4445666889999876555554431 22333332
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHhCC------CCe-EEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEe
Q psy14484 170 DSRNINKGNSANEIARCAIFDLEILLKKNH------NKI-AAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIAD 242 (430)
Q Consensus 170 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~------~~~-~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~D 242 (430)
|.+.++..+++.. +++ ++|++|+ +++++|.+.| +++|.++|++||++||+|
T Consensus 224 -----------------d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~-i~~~~G~i~~----L~~i~~l~~k~~~~LIvD 281 (481)
T PLN02822 224 -----------------DMESLRNTLEKLTAENKRKKKLRRYIVVEA-IYQNSGQIAP----LDEIVRLKEKYRFRVLLD 281 (481)
T ss_pred -----------------CHHHHHHHHHHHhhhhcccCCCcEEEEEec-CCCCCCCccC----HHHHHHHHHHcCCEEEEE
Confidence 4455555554321 234 8999999 9999998888 999999999999999999
Q ss_pred cccc--CCCCcccccccccCCC---CCceee--eecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCC--HH
Q psy14484 243 EIAV--GCGRTGKFFACEHAEI---WPDFLC--LSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGN--PL 313 (430)
Q Consensus 243 Ev~~--g~g~~g~~~~~~~~~~---~~d~~~--~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~--~~ 313 (430)
|+|+ .+|++|.+ ..+++++ .+|+++ |||+++. .-|++++++++++.+.. ..++.+|+++ +.
T Consensus 282 Ea~s~gvlG~~G~G-~~e~~~v~~~~~dii~~s~sKalg~---~GG~i~g~~~ii~~~~~------~~~~~~fsa~lPp~ 351 (481)
T PLN02822 282 ESNSFGVLGKSGRG-LSEHFGVPIEKIDIITAAMGHALAT---EGGFCTGSARVVDHQRL------SSSGYVFSASLPPY 351 (481)
T ss_pred CCccccccCCCCCC-hHHHcCCCCCCCeEEEecchhhhhh---CCeEEEcCHHHHHHHHh------cCCceeeccccCHH
Confidence 9998 34555543 4566776 688887 7799973 12678899999888764 2356677765 67
Q ss_pred HHHHHHHHHHHHhh-cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCc---cchhHHHHHHHHHH-
Q psy14484 314 ACCAALATLEIFNK-DNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPE---QIETFSKKFFVAAL- 388 (430)
Q Consensus 314 ~~~aa~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~a~~~~~~l~- 388 (430)
.++++.++|+.++. ++..++++++++++++.|+++...+. ...+.+.++.+.+. .... ........+++.|+
T Consensus 352 ~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~--~~~~~spi~~l~l~-~~~~~~~~~~~~~~~~~~~Ll~ 428 (481)
T PLN02822 352 LASAAITAIDVLEDNPSVLAKLKENIALLHKGLSDIPGLSI--GSNTLSPIVFLHLE-KSTGSAKEDLSLLEHIADRMLK 428 (481)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCccc--CCCCCCCEEEEEeC-CCcccccchHHHHHHHHHHHHh
Confidence 78888889987765 56888999999999999987532222 11234555556654 3101 01122467899987
Q ss_pred HCCcEEeec----------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHhhC
Q psy14484 389 KNELLLRPI----------GNTVYLMPPYILNKNEIQHMTSAIFQTFNEVIT 430 (430)
Q Consensus 389 ~~Gv~~~~~----------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~~ 430 (430)
++||++.+. +..+|++++..+|+++|++++++|++++.++++
T Consensus 429 e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~~~~ 480 (481)
T PLN02822 429 EDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAASVLK 480 (481)
T ss_pred cCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 789999964 136999999999999999999999999998873
No 89
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=2.3e-32 Score=266.18 Aligned_cols=333 Identities=15% Similarity=0.145 Sum_probs=244.4
Q ss_pred CCCEEEecccccccccCCC-CCHHHHHHHHHHHhhccccc----cCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHH
Q psy14484 32 SGKRYLDAISSWWVNLFGH-SNSYINKALKNQLNKLEHVM----LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASA 106 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~----~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA 106 (430)
+|+++++|+++ ++||. +||+|++++.++++++.... ...+.++...+++++|+++++ .+++++++||++|
T Consensus 43 ~~~~~~~~~sn---~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g--~~~~~~~~SG~~A 117 (406)
T PRK13393 43 GPREVTVWCSN---DYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHG--KEAALLFTSGYVS 117 (406)
T ss_pred CCccEEEeecc---cccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhC--CCcEEEeCCcHHH
Confidence 46899999996 78998 69999999999998865421 112345678999999999995 4788899999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 186 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (430)
++.|++++... .++.+|+++..||+++.......+. +...++.+
T Consensus 118 n~~ai~~l~~~-------~~g~~I~~~~~~H~s~~~~~~~~g~------------~~~~~~~~----------------- 161 (406)
T PRK13393 118 NWAALSTLGSR-------LPGCVILSDELNHASMIEGIRHSRA------------EKRIFRHN----------------- 161 (406)
T ss_pred HHHHHHHhhcC-------CCCCEEEEccchhHHHHHHHHHcCC------------eEEEeCCC-----------------
Confidence 99999965431 1335788888999987765544321 11233322
Q ss_pred HHHHHHHHHHhC-CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-CC-CCcccccccccCCCC
Q psy14484 187 AIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-GC-GRTGKFFACEHAEIW 263 (430)
Q Consensus 187 d~~~le~~l~~~-~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~-g~-g~~g~~~~~~~~~~~ 263 (430)
|++.+++.++.. ++++++|++|+ +++++|.+.| +++|.++|+++|+++|+||+|+ |+ |+.|..+ .+..++.
T Consensus 162 d~~~l~~~l~~~~~~~~~~v~~~~-v~~~~G~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~-~~~~~~~ 235 (406)
T PRK13393 162 DPADLERKLSDLDPHRPKLVAFES-VYSMDGDIAP----IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGI-AEREGLA 235 (406)
T ss_pred CHHHHHHHHHhccCCCCEEEEEcC-CCCCCCchhC----HHHHHHHHHHcCCEEEEECCccccccCCCCCch-hhhcCCC
Confidence 677778777654 24678999999 9999998888 9999999999999999999997 66 6666543 2444543
Q ss_pred --Ccee--eeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcC-HHHHHHHHH
Q psy14484 264 --PDFL--CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDN-ILQRISQDM 338 (430)
Q Consensus 264 --~d~~--~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~-~~~~~~~~~ 338 (430)
+|++ +|||+++. .-|++++++++.+.+.. ..+. +..+.+.++.+++++.++|+.+++.. ...+++++.
T Consensus 236 ~~~~i~~~tlsKa~g~---~GG~~~~~~~~~~~l~~--~~~~--~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~ 308 (406)
T PRK13393 236 DRLTIIEGTLAKAFGV---MGGYITGSAALCDFIRS--FASG--FIFTTSLPPAVAAGALASVRHLKASSAERERHQDRV 308 (406)
T ss_pred CCCeEEEEeCchhhcc---cCceeeCCHHHHHHHHH--hCcC--ceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHH
Confidence 5776 89999974 12567888888877765 1111 12355668888888999998775432 235567788
Q ss_pred HHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHH-CCcEEeec-------C-CEEEEeCCCCC
Q psy14484 339 KKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALK-NELLLRPI-------G-NTVYLMPPYIL 409 (430)
Q Consensus 339 ~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~-~Gv~~~~~-------~-~~lR~~~~~~~ 409 (430)
+++++.|+++ ..+ .+++.|.++.+.+. + ...+.++.+.|++ +||++.+. + +.+||+|++.+
T Consensus 309 ~~l~~~L~~~-g~~---~~~~~~~i~~v~~~-~-----~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~ 378 (406)
T PRK13393 309 ARLRARLDKA-GIP---HLPNPSHIVPVMVG-D-----PVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLH 378 (406)
T ss_pred HHHHHHHHHc-CCC---cCCCCCCeEEEEeC-C-----HHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCC
Confidence 8899988765 222 23566777766544 2 1124678899987 59998752 2 68999999999
Q ss_pred CHHHHHHHHHHHHHHHHHh
Q psy14484 410 NKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 410 t~e~i~~~~~~l~~~l~~~ 428 (430)
|++|+++++++|++++.++
T Consensus 379 t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 379 TDADIEHLVQALSEIWARL 397 (406)
T ss_pred CHHHHHHHHHHHHHHHHhc
Confidence 9999999999999988754
No 90
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=100.00 E-value=1.2e-31 Score=261.06 Aligned_cols=333 Identities=17% Similarity=0.223 Sum_probs=241.5
Q ss_pred CCCEEEecccccccccCCC-CCHHHHHHHHHHHhhcccccc----CCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHH
Q psy14484 32 SGKRYLDAISSWWVNLFGH-SNSYINKALKNQLNKLEHVML----SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASA 106 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~----~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA 106 (430)
+|+++++|+++ ++||. .||+|++|+.+++++++.... ..+.++...++++.+++.++ .+..++++||++|
T Consensus 43 ~~~~~~~~~sn---~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g--~~~~l~~~sG~~a 117 (402)
T TIGR01821 43 GAKDVTVWCSN---DYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHG--KESALVFTSGYVA 117 (402)
T ss_pred CCeeEEEeEcc---CcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhC--CCeEEEECchHHH
Confidence 46999999986 78887 499999999999988653211 12456788999999999995 3578888999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 186 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (430)
|+.++++++.. .++.+++.+..||+.........+.+ ....+.+
T Consensus 118 n~~ai~~l~~~-------~~~~~v~~~~~~h~s~~~~~~~~g~~------------~~~~~~~----------------- 161 (402)
T TIGR01821 118 NDATLATLAKI-------IPGCVIFSDELNHASMIEGIRHSGAE------------KFIFRHN----------------- 161 (402)
T ss_pred HHHHHHHhhCC-------CCCCEEEEcchHhHHHHHHHHHcCCe------------EEEECCC-----------------
Confidence 99999988743 23456777778998766555433311 1122222
Q ss_pred HHHHHHHHHHhCC-CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-CC-CCcccccccccCCC-
Q psy14484 187 AIFDLEILLKKNH-NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-GC-GRTGKFFACEHAEI- 262 (430)
Q Consensus 187 d~~~le~~l~~~~-~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~-g~-g~~g~~~~~~~~~~- 262 (430)
|++++++.++... +++++|++++ +++++|.+.| +++|.++|++||+++|+||+|+ |+ +..|.. ..+..++
T Consensus 162 d~~~l~~~l~~~~~~~~~~v~~e~-~~~~~G~~~~----l~~i~~l~~~~~~~livDea~~~G~~g~~g~g-~~~~~~~~ 235 (402)
T TIGR01821 162 DVAHLEKLLQSVDPNRPKIIAFES-VYSMDGDIAP----IEEICDLADKYGALTYLDEVHAVGLYGPRGGG-IAERDGLM 235 (402)
T ss_pred CHHHHHHHHHhccCCCCeEEEEcC-CCCCCCCccC----HHHHHHHHHHcCCEEEEeCcccccccCCCCCc-cchhccCC
Confidence 6778888886543 3678999999 9999998888 9999999999999999999998 42 333332 2334444
Q ss_pred -CCcee--eeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhc-CHHHHHHHHH
Q psy14484 263 -WPDFL--CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD-NILQRISQDM 338 (430)
Q Consensus 263 -~~d~~--~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~-~~~~~~~~~~ 338 (430)
.+|++ +|||+++. .-|++++++++++.+.. ...+ ...+.+.++.+++++.++|+.+++. ...++.+++.
T Consensus 236 ~~~div~~t~sKa~g~---~GG~i~~~~~~~~~l~~--~~~~--~~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~ 308 (402)
T TIGR01821 236 HRIDIIEGTLAKAFGV---VGGYIAASRKLIDAIRS--YAPG--FIFTTSLPPAIAAGATASIRHLKESQDLRRAHQENV 308 (402)
T ss_pred CCCeEEEEechhhhcc---CCceeecCHHHHHHHHH--hCcC--ceecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Confidence 46777 89999974 12568889898887764 1111 1234567888899999999977653 3456667888
Q ss_pred HHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHH-CCcEEeec-------C-CEEEEeCCCCC
Q psy14484 339 KKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALK-NELLLRPI-------G-NTVYLMPPYIL 409 (430)
Q Consensus 339 ~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~-~Gv~~~~~-------~-~~lR~~~~~~~ 409 (430)
+++++.|+++ ..+. +.+.+.++.+.+. . ...+..+++.|++ +||++.+. + +++|+++++.+
T Consensus 309 ~~l~~~L~~~-g~~~---~~~~~~i~~i~~~-~-----~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~ 378 (402)
T TIGR01821 309 KRLKNLLEAL-GIPV---IPNPSHIVPVIIG-D-----AALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAH 378 (402)
T ss_pred HHHHHHHHHc-CCCc---CCCCCCEEEEEeC-C-----HHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCC
Confidence 8999988876 3332 2335667666554 2 1124678888875 59998763 2 68999999999
Q ss_pred CHHHHHHHHHHHHHHHHHh
Q psy14484 410 NKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 410 t~e~i~~~~~~l~~~l~~~ 428 (430)
|++|+++++++|+++++++
T Consensus 379 t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 379 TDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred CHHHHHHHHHHHHHHHHHc
Confidence 9999999999999998764
No 91
>PRK09064 5-aminolevulinate synthase; Validated
Probab=100.00 E-value=1.4e-31 Score=261.17 Aligned_cols=332 Identities=17% Similarity=0.191 Sum_probs=239.8
Q ss_pred CCEEEecccccccccCCCC-CHHHHHHHHHHHhhccccc----cCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHH
Q psy14484 33 GKRYLDAISSWWVNLFGHS-NSYINKALKNQLNKLEHVM----LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAV 107 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~-~p~v~~a~~~~~~~~~~~~----~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~ 107 (430)
|++++||+++ ++||++ ||+|++++.++++++.... ...+.++...++++.|+++++ .+..+++++|++|+
T Consensus 45 ~~~~~~~~s~---dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g--~~~~~~~~sG~~an 119 (407)
T PRK09064 45 EREVTVWCSN---DYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHG--KEAALVFTSGYVSN 119 (407)
T ss_pred CceEEEEECC---CCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhC--CCcEEEECcHHHHH
Confidence 5899999985 789997 9999999999998764321 112356788999999999985 35677788899999
Q ss_pred HHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHH
Q psy14484 108 EVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCA 187 (430)
Q Consensus 108 ~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 187 (430)
+.++++++.+ ..+.+++.+..+|+.........+. .....+.+ |
T Consensus 120 ~~ai~~l~~~-------~~~~~i~~~~~~h~s~~~~~~~~~~------------~~~~~~~~-----------------d 163 (407)
T PRK09064 120 DATLSTLAKL-------IPDCVIFSDELNHASMIEGIRRSRC------------EKHIFRHN-----------------D 163 (407)
T ss_pred HHHHHHHhCC-------CCCCEEEEeCcchHHHHHHHHHcCC------------cEEEECCC-----------------C
Confidence 9999988653 1234566666667665443332221 11222222 6
Q ss_pred HHHHHHHHHhCC-CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-C-CCCcccccccccCCC--
Q psy14484 188 IFDLEILLKKNH-NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-G-CGRTGKFFACEHAEI-- 262 (430)
Q Consensus 188 ~~~le~~l~~~~-~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~-g-~g~~g~~~~~~~~~~-- 262 (430)
++++++.++... +++++|++++ +++++|.+.| +++|.++|+++|++||+||+|+ | +|+.|..+ .+..++
T Consensus 164 ~~~le~~l~~~~~~~~~~v~~~~-v~s~~G~~~~----l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~-~~~~~~~~ 237 (407)
T PRK09064 164 VAHLEELLAAADPDRPKLIAFES-VYSMDGDIAP----IAEICDLADKYNALTYLDEVHAVGMYGPRGGGI-AERDGLMD 237 (407)
T ss_pred HHHHHHHHHhccCCCCeEEEEeC-CCCCCccccC----HHHHHHHHHHcCCEEEEECCCcccccCCCCCCh-HHhcCCCC
Confidence 788888887543 4688999999 9999998888 9999999999999999999998 5 46666543 344444
Q ss_pred CCcee--eeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcC-HHHHHHHHHH
Q psy14484 263 WPDFL--CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDN-ILQRISQDMK 339 (430)
Q Consensus 263 ~~d~~--~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~-~~~~~~~~~~ 339 (430)
.+|++ ||||+++. .-|++++++++++.+... ..+ +..+.+.++.+++++.++++.++..+ ..++++++.+
T Consensus 238 ~~div~~t~sKa~g~---~GG~~~~~~~~~~~l~~~--~~~--~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~ 310 (407)
T PRK09064 238 RIDIIEGTLAKAFGV---MGGYIAGSAALVDAVRSY--APG--FIFTTSLPPAIAAAALASIRHLKESNEERERHQERAA 310 (407)
T ss_pred CCeEEEEecchhhhc---cCceEecCHHHHHHHHHh--Ccc--ccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 46887 89999873 226688898888876541 111 22344667888888889998876543 3577888999
Q ss_pred HHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHH-CCcEEeec--------CCEEEEeCCCCCC
Q psy14484 340 KITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALK-NELLLRPI--------GNTVYLMPPYILN 410 (430)
Q Consensus 340 ~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~-~Gv~~~~~--------~~~lR~~~~~~~t 410 (430)
++.+.|+++ ..+.+ ...+.++.+.+. +. ..+..+.+.|++ +||++.+. .+++||++++.+|
T Consensus 311 ~l~~~L~~~-g~~~~---~~~~~iv~i~~~-~~-----~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t 380 (407)
T PRK09064 311 KLKAALDAA-GIPVM---PNESHIVPVMVG-DP-----EKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHT 380 (407)
T ss_pred HHHHHHHHc-CCCCC---CCCCCEEEEEeC-CH-----HHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCC
Confidence 999999875 22222 234566655554 21 114678888875 59998753 2579999999999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q psy14484 411 KNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 411 ~e~i~~~~~~l~~~l~~~ 428 (430)
++|+++++++|++++.++
T Consensus 381 ~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 381 DEMIDHLVEALVEVWARL 398 (407)
T ss_pred HHHHHHHHHHHHHHHHHc
Confidence 999999999999988754
No 92
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=100.00 E-value=4.1e-30 Score=240.89 Aligned_cols=330 Identities=19% Similarity=0.207 Sum_probs=252.2
Q ss_pred EECCCCEEEecccccccccCCC-CCHHHHHHHHHHHhhcccc----ccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCc
Q psy14484 29 IDVSGKRYLDAISSWWVNLFGH-SNSYINKALKNQLNKLEHV----MLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDG 103 (430)
Q Consensus 29 ~d~~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~----~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sg 103 (430)
.-.+|++++||+|| ++||. +||++++++.+++++++.. ....+.++.+.+|++.|++++ +.+..++++||
T Consensus 34 ~~~~~~~~~nf~SN---dYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~--g~e~al~f~SG 108 (388)
T COG0156 34 IRADGRKVLNFCSN---DYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL--GAEAALLFSSG 108 (388)
T ss_pred eecCCceeEeeecc---CcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh--CCCcEEEEccc
Confidence 44569999999996 78998 5999999999999985432 123466789999999999999 77889999999
Q ss_pred hHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHH
Q psy14484 104 ASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEI 183 (430)
Q Consensus 104 teA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (430)
..||..++..+. +++.+|+.+.-.|.+......++..+ .+.+.|
T Consensus 109 y~AN~~~i~~l~---------~~~dli~~D~lnHASiidG~rls~a~--------------~~~f~H------------- 152 (388)
T COG0156 109 FVANLGLLSALL---------KKGDLIFSDELNHASIIDGIRLSRAE--------------VRRFKH------------- 152 (388)
T ss_pred chhHHHHHHHhc---------CCCcEEEEechhhhhHHHHHHhCCCc--------------EEEecC-------------
Confidence 999999999887 45778888999999877777766532 233444
Q ss_pred HHHHHHHHHHHHHhCC---CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc--ccccc
Q psy14484 184 ARCAIFDLEILLKKNH---NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK--FFACE 258 (430)
Q Consensus 184 ~~~d~~~le~~l~~~~---~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~--~~~~~ 258 (430)
||++.||+.+++.. .+...|++|. |.++.|.+.| |++|.+++++|+++|++||+|+ +|..|. .+..+
T Consensus 153 --nD~~~Le~~l~~~~~~~~~~~~Ivteg-VfSMdGdiAp----L~~l~~L~~ky~a~L~VDEAHa-~Gv~G~~GrG~~e 224 (388)
T COG0156 153 --NDLDHLEALLEEARENGARRKLIVTEG-VFSMDGDIAP----LPELVELAEKYGALLYVDEAHA-VGVLGPNGRGLAE 224 (388)
T ss_pred --CCHHHHHHHHHhhhccCCCceEEEEec-cccCCCCcCC----HHHHHHHHHHhCcEEEEEcccc-ccccCCCCccHHH
Confidence 48999999998741 1478999999 9999999999 9999999999999999999997 555553 23345
Q ss_pred cCCCCC---cee--eeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh-cCHHH
Q psy14484 259 HAEIWP---DFL--CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK-DNILQ 332 (430)
Q Consensus 259 ~~~~~~---d~~--~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~-~~~~~ 332 (430)
+.|+.+ |++ ||||++|.. -|++.+++.+.+.+.. ..+++.++.. .+|..++++.++++.+++ ++.++
T Consensus 225 ~~g~~~~~vdi~~gTlsKAlGs~---Gg~v~g~~~~~d~L~~--~ar~~ifSta--lpP~~aaa~~~al~~l~~~~~~r~ 297 (388)
T COG0156 225 HFGLEPEEVDIIVGTLGKALGSS---GGYIAGSAALIDYLRN--RARPFIFSTA--LPPAVAAAALAALRILEEGPERRE 297 (388)
T ss_pred HhCCCCccceEEEEEchhhhccc---CceeeCcHHHHHHHHH--hCCceeccCC--CCHHHHHHHHHHHHHHHhCHHHHH
Confidence 666653 333 899999862 2678999999988876 4556655443 367777788899998875 57788
Q ss_pred HHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec--------CCEEEEe
Q psy14484 333 RISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI--------GNTVYLM 404 (430)
Q Consensus 333 ~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~--------~~~lR~~ 404 (430)
+++++..++++.++.. .+.. .+....++.+.+. + ...+.++...|+++||.+.+- ...+|++
T Consensus 298 ~L~~~~~~~~~~~~~~-~~~~---~~s~s~I~pv~~g-d-----~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~ 367 (388)
T COG0156 298 RLQELAAFFRSLLKAL-GLVL---LPSESPIIPVILG-D-----EERALEASRALLEEGIYVSAIRPPTVPKGTARLRIT 367 (388)
T ss_pred HHHHHHHHHHHHHHhc-CCcc---CCCCCCeeeeEeC-C-----HHHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEE
Confidence 9999999998666543 2111 1222233444444 2 222578899999999998752 2689999
Q ss_pred CCCCCCHHHHHHHHHHHHHH
Q psy14484 405 PPYILNKNEIQHMTSAIFQT 424 (430)
Q Consensus 405 ~~~~~t~e~i~~~~~~l~~~ 424 (430)
++..+|+++|+.+++.|.++
T Consensus 368 lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 368 LTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred ecCCCCHHHHHHHHHHHHhh
Confidence 99999999999999998764
No 93
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=100.00 E-value=3e-30 Score=248.81 Aligned_cols=338 Identities=12% Similarity=0.158 Sum_probs=234.2
Q ss_pred EecccccccccCCC-CCHHHHHHHHHHHhhcccc---cc-CCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHH
Q psy14484 37 LDAISSWWVNLFGH-SNSYINKALKNQLNKLEHV---ML-SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVAL 111 (430)
Q Consensus 37 lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~---~~-~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al 111 (430)
|||+++ ++||. .||++++++.+++++++.. .+ .+.....+.+|++.++++++ .+..++++||+.|+..++
T Consensus 1 ~~f~s~---dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g--~e~al~~~sG~~a~~~~i 75 (392)
T PLN03227 1 LNFATH---DFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLG--TESAILYSDGASTTSSTV 75 (392)
T ss_pred CCCcCc---CccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhC--CCcEEEecCcHHHHHHHH
Confidence 467764 77887 5999999999999875422 11 13345678899999999995 457788889988988888
Q ss_pred HHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHH
Q psy14484 112 KMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDL 191 (430)
Q Consensus 112 ~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 191 (430)
..+.. +.+.|++.++.|. .......++. .....+++.+ ..+++.+
T Consensus 76 ~~l~~--------~GD~Vl~~~~~h~-s~~~~~~l~~------------~~~~~~~~~d--------------~~~l~~~ 120 (392)
T PLN03227 76 AAFAK--------RGDLLVVDRGVNE-ALLVGVSLSR------------ANVRWFRHND--------------MKDLRRV 120 (392)
T ss_pred HHhCC--------CCCEEEEeccccH-HHHHHHHHcC------------CeEEEeCCCC--------------HHHHHHH
Confidence 77643 5677777666654 3322222111 1112222221 0133333
Q ss_pred HHHHHhC--------CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc--CCCCcccccccccCC
Q psy14484 192 EILLKKN--------HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV--GCGRTGKFFACEHAE 261 (430)
Q Consensus 192 e~~l~~~--------~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~--g~g~~g~~~~~~~~~ 261 (430)
.+.+... ..++..|++|+ +++++|.+.| +++|.++|++||+++|+||+|+ .+|++|. +..++++
T Consensus 121 ~~~i~~~~~a~~~~~~~~t~~vi~E~-v~~~~G~i~~----l~~i~~l~~~~g~~livDe~~~~g~~g~~G~-g~~~~~g 194 (392)
T PLN03227 121 LEQVRAQDVALKRKPTDQRRFLVVEG-LYKNTGTLAP----LKELVALKEEFHYRLILDESFSFGTLGKSGR-GSLEHAG 194 (392)
T ss_pred HHHhhhhccccccccCCCcEEEEEcC-CcCCCCcccC----HHHHHHHHHHcCCEEEEECcccccccCCCCC-cHHHHcC
Confidence 3333211 13578999999 9999998888 9999999999999999999997 2344444 5678888
Q ss_pred CCC----ceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCC--HHHHHHHHHHHHH-HhhcCHHHHH
Q psy14484 262 IWP----DFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGN--PLACCAALATLEI-FNKDNILQRI 334 (430)
Q Consensus 262 ~~~----d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~--~~~~~aa~~~l~~-~~~~~~~~~~ 334 (430)
+.| |++++|++-+.| ...|++++++++++.+.. ..++.+|+++ |..+.++.++++. ++.+++.+++
T Consensus 195 ~~p~~~~Div~~slsk~~g-~~gg~v~~~~~~~~~~~~------~~~~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l 267 (392)
T PLN03227 195 LKPMVHAEIVTFSLENAFG-SVGGMTVGSEEVVDHQRL------SGSGYCFSASAPPFLAKADATATAGELAGPQLLNRL 267 (392)
T ss_pred CCCCCCceEEEeechhhhh-ccCcEEecCHHHHHHHHH------hCcCccccCCCCHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 888 999877443333 355778889888776653 2356677765 6667777777654 4556788999
Q ss_pred HHHHHHHHHHHHchhcCCCeeeEee--------cceEEEEEEeecCCccc----hhHHHHHHHHHHHCCcEEeec-----
Q psy14484 335 SQDMKKITKALTSLITHPKIINFRQ--------KGMIWAFDVIIEDPEQI----ETFSKKFFVAALKNELLLRPI----- 397 (430)
Q Consensus 335 ~~~~~~l~~~l~~l~~~~~~~~~~~--------~g~~~~~~~~~~~~~~~----~~~a~~~~~~l~~~Gv~~~~~----- 397 (430)
++++++|+++|++. .++.+..+++ .|.++.+++. +..... ......+++.|+++|+++.+.
T Consensus 268 ~~~~~~l~~~L~~~-~~~~~~~~rg~~~~~~~~~~~i~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~ 345 (392)
T PLN03227 268 HDSIANLYSTLTNS-SHPYALKLRNRLVITSDPISPIIYLRLS-DQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVK 345 (392)
T ss_pred HHHHHHHHHHHHhc-CCccccccccccccCCCCCCCEEEEEeC-CHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccC
Confidence 99999999999863 4454444444 3567888876 422111 112358999999999988642
Q ss_pred -------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 398 -------GNTVYLMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 398 -------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
...+|++++..+|+|||++++++|++++++++
T Consensus 346 ~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~~~~ 384 (392)
T PLN03227 346 KFLQLVPPPCLRVVANASHTREDIDKLLTVLGEAVEAIL 384 (392)
T ss_pred CcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 24689999999999999999999999998765
No 94
>PRK07179 hypothetical protein; Provisional
Probab=100.00 E-value=7.4e-30 Score=248.80 Aligned_cols=341 Identities=16% Similarity=0.181 Sum_probs=239.3
Q ss_pred cccCCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhcccc----ccCCCCCHHHHHHH
Q psy14484 8 KKKSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHV----MLSNLTHKPVIKLS 83 (430)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~----~~~~~~~~~~~~l~ 83 (430)
+.+++.+++..+++|. +++|.+|++||||. +||+|++++.+++++.+.. .......+...+++
T Consensus 39 ~~~~~~~~~~~~~~g~---~~~~~~~~~YL~l~----------~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le 105 (407)
T PRK07179 39 KNWNGKHLVLGKTPGP---DAIILQSNDYLNLS----------GHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFE 105 (407)
T ss_pred cCcCCceEEeecCCCC---cEEEeecCCccCCC----------CCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHH
Confidence 3456788888878776 58899999999976 5899999999999875321 11122335778999
Q ss_pred HHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCe
Q psy14484 84 EKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKT 163 (430)
Q Consensus 84 ~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (430)
+.|++.++ .+.+++++||++|++.+++++.. +++.|++ +...|..........+ .
T Consensus 106 ~~la~~~g--~~~~~~~~sG~~An~~~l~~l~~--------~g~~v~~-~~~~h~s~~~~~~~~g--------------~ 160 (407)
T PRK07179 106 KKLAAFTG--FESCLLCQSGWAANVGLLQTIAD--------PNTPVYI-DFFAHMSLWEGVRAAG--------------A 160 (407)
T ss_pred HHHHHHhC--CCcEEEECCHHHHHHHHHHHhCC--------CCCEEEE-ECCcCHHHHHHHHHCC--------------C
Confidence 99999985 46788999999999999998764 3455554 4444433322211111 1
Q ss_pred eEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEec
Q psy14484 164 YIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADE 243 (430)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DE 243 (430)
..+++++ +|+++|++.+++ .++++|++++ +++++|.+.| +++|.++|+++|+++|+||
T Consensus 161 ~~~~~~~---------------~d~~~l~~~l~~--~~~~lV~v~~-v~n~tG~i~p----l~~I~~l~~~~~~~livDe 218 (407)
T PRK07179 161 QAHPFRH---------------NDVDHLRRQIER--HGPGIIVVDS-VYSTTGTIAP----LADIVDIAEEFGCVLVVDE 218 (407)
T ss_pred eEEEecC---------------CCHHHHHHHHHh--cCCeEEEECC-CCCCCCcccc----HHHHHHHHHHcCCEEEEEC
Confidence 1222322 288999999973 2468899999 9999998888 9999999999999999999
Q ss_pred cccCCCC---cccccccccCCCC--Cceee--eecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHH
Q psy14484 244 IAVGCGR---TGKFFACEHAEIW--PDFLC--LSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACC 316 (430)
Q Consensus 244 v~~g~g~---~g~~~~~~~~~~~--~d~~~--~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~ 316 (430)
+|+ +++ +|..+ +..+++. +|+++ ++|++++ ++|++++++++++.+.. ...+..+++|.. +..++
T Consensus 219 a~~-~g~~g~~g~g~-~~~~~~~~~vdi~~~S~sK~~g~---~~G~l~~~~~~~~~~~~--~~~~~~~~~t~~--~~~~a 289 (407)
T PRK07179 219 SHS-LGTHGPQGAGL-VAELGLTSRVHFITASLAKAFAG---RAGIITCPRELAEYVPF--VSYPAIFSSTLL--PHEIA 289 (407)
T ss_pred ccc-ccCcCCCCCch-HHhcCCCCCCCEEEeechHhhhc---cCeEEEeCHHHHHHHHH--hCcCeeeCCCCC--HHHHH
Confidence 997 433 33322 3344543 47764 6898863 68999999988776653 111123444443 44445
Q ss_pred HHHHHHHHHhhc-CHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEe
Q psy14484 317 AALATLEIFNKD-NILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLR 395 (430)
Q Consensus 317 aa~~~l~~~~~~-~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~ 395 (430)
++.++++.++.. +..++++++.+++++.|+++ ... +.+.+.++.+.+. .. .-+..+.+.|.++||.+.
T Consensus 290 a~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~----v~~~~~i~~l~~~-~~-----~~~~~~~~~L~~~GI~~~ 358 (407)
T PRK07179 290 GLEATLEVIESADDRRARLHANARFLREGLSEL-GYN----IRSESQIIALETG-SE-----RNTEVLRDALEERNVFGA 358 (407)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCC----CCCCCCEEEEEeC-CH-----HHHHHHHHHHHHCCceEe
Confidence 555677766543 46788999999999999876 222 2245677777654 21 113578889999999743
Q ss_pred ----ec----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 396 ----PI----GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 396 ----~~----~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
|. .+.+||+++..+|++|+++++++|++++++.
T Consensus 359 ~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 359 VFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred eecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 32 3689999999999999999999999988753
No 95
>PLN02955 8-amino-7-oxononanoate synthase
Probab=100.00 E-value=5.5e-30 Score=245.44 Aligned_cols=336 Identities=16% Similarity=0.100 Sum_probs=243.0
Q ss_pred CCEEEecccccccccCCC-CCHHHHHHHHHHHhhccccc----cCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHH
Q psy14484 33 GKRYLDAISSWWVNLFGH-SNSYINKALKNQLNKLEHVM----LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAV 107 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~----~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~ 107 (430)
++++++|+++ ++||. .||++++++.+++++++... ...+.+..++++++.|++++ +.+.+++++||..||
T Consensus 101 ~r~~l~FsSn---dYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~--g~e~all~sSGy~AN 175 (476)
T PLN02955 101 FKKLLLFSGN---DYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLK--KKEDCLVCPTGFAAN 175 (476)
T ss_pred CceEEEeecc---CccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHH--CCCcEEEECChHHHH
Confidence 4799999985 78997 59999999999999875431 22345578889999999999 778899999999999
Q ss_pred HHHHHHHHHhhh---hcCC--CCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhH
Q psy14484 108 EVALKMSFHYWY---NKGF--LNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANE 182 (430)
Q Consensus 108 ~~al~~~~~~~~---~~g~--~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (430)
..++.++..... ..++ .+++.+|+.+...|.+......++... .+.....++|
T Consensus 176 ~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~----------~~a~~~~f~H------------ 233 (476)
T PLN02955 176 MAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQ----------GNVEVFVYRH------------ 233 (476)
T ss_pred HHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhcccc----------CCceEEEeCC------------
Confidence 999987642100 0000 145667888999998877666544210 0112333454
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc--ccccccC
Q psy14484 183 IARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK--FFACEHA 260 (430)
Q Consensus 183 ~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~--~~~~~~~ 260 (430)
||+++|++++++++++.+.|++|+ +.++.|.+.| +++|.++|++||++||+||+|+ +|..|. .+..+.+
T Consensus 234 ---ND~~~Le~~L~~~~~~~~~Vv~Eg-V~SmdGdiap----L~eL~~L~~~~ga~LiVDEAH~-~Gv~G~~G~G~~e~~ 304 (476)
T PLN02955 234 ---CDMYHLNSLLSSCKMKRKVVVTDS-LFSMDGDFAP----MEELSQLRKKYGFLLVIDDAHG-TFVCGENGGGVAEEF 304 (476)
T ss_pred ---CCHHHHHHHHHhCCCCceEEEEeC-CCCCCCCcCC----HHHHHHHHHHcCcEEEEccccc-CceecCCCCcHHHHh
Confidence 499999999987766678999999 9999999988 9999999999999999999997 445554 3445667
Q ss_pred CCCCce----eeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh-cCHHHHHH
Q psy14484 261 EIWPDF----LCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK-DNILQRIS 335 (430)
Q Consensus 261 ~~~~d~----~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~-~~~~~~~~ 335 (430)
++.+|+ .||||++|. ..|++++++++++.+.. ..+++..+ | ..+|..++++.++++.+.. +..+++++
T Consensus 305 g~~~di~ii~~TLsKA~G~---~GGfi~gs~~~~~~l~~--~~~~~ifS-t-alpp~~aaa~laal~l~~~~~~~r~~L~ 377 (476)
T PLN02955 305 NCEADVDLCVGTLSKAAGC---HGGFIACSKKWKQLIQS--RGRSFIFS-T-AIPVPMAAAAYAAVVVARKEKWRRKAIW 377 (476)
T ss_pred CCCCCCcEEEEeCccchhc---cCceeecHHHHHHHHHH--hCCCCeec-c-cccHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 776654 589999973 23569999988888875 23333332 2 3345566677788887754 34557788
Q ss_pred HHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec--------CCEEEEeCCC
Q psy14484 336 QDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI--------GNTVYLMPPY 407 (430)
Q Consensus 336 ~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~--------~~~lR~~~~~ 407 (430)
++.++|++.+ ..+. ...++.+.+. + ...+..++++|+++|+++.+. ...+||+++.
T Consensus 378 ~n~~~fr~~~----G~~~------~sPI~pI~ig-~-----~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA 441 (476)
T PLN02955 378 ERVKEFKALS----GVDI------SSPIISLVVG-N-----QEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSA 441 (476)
T ss_pred HHHHHHHHhc----CCCC------CCCEEEEEeC-C-----HHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCC
Confidence 8888887732 2211 1334444444 2 222567899999999998852 2479999999
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q psy14484 408 ILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 408 ~~t~e~i~~~~~~l~~~l~~ 427 (430)
.||++||+.++++|.++.+.
T Consensus 442 ~Ht~edId~lv~~L~~~~~~ 461 (476)
T PLN02955 442 AHTTEDVKKLITALSSCLDF 461 (476)
T ss_pred CCCHHHHHHHHHHHHHHHhh
Confidence 99999999999999887654
No 96
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.98 E-value=1.7e-29 Score=245.20 Aligned_cols=342 Identities=16% Similarity=0.150 Sum_probs=239.5
Q ss_pred eeEEeecCCceeEEEECCCCEEEecccccccccCCC-CCHHHHHHHHHHHhhccccc----cCCCCCHHHHHHHHHHHhh
Q psy14484 15 LVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGH-SNSYINKALKNQLNKLEHVM----LSNLTHKPVIKLSEKLSSL 89 (430)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~----~~~~~~~~~~~l~~~l~~~ 89 (430)
.++.+++|. ++++ +|++||||.++ .++|| .+|+|++++++++....... ...+..+...++++.+++.
T Consensus 24 ~~~~~~~g~---~~~~-~g~~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~ 96 (385)
T PRK05958 24 RPREGGAGR---WLVV-DGRRMLNFASN---DYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEW 96 (385)
T ss_pred cccccCCCc---eeEe-CCceEEEeeCC---CcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHH
Confidence 456667666 7997 99999999987 35897 68999999999987643211 1123467788999999999
Q ss_pred cCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC
Q psy14484 90 TQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP 169 (430)
Q Consensus 90 ~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (430)
++ .++.+++++|++++..+++.+.. +++.|++.++ +|+.........+ .....++.+
T Consensus 97 ~~--~~~~i~~~~g~~~~~~~l~~~~~--------~gd~V~~~~~-~~~~~~~~~~~~g------------~~~~~~~~~ 153 (385)
T PRK05958 97 FG--AERALLFSSGYAANLAVLTALAG--------KGDLIVSDKL-NHASLIDGARLSR------------ARVRRYPHN 153 (385)
T ss_pred hC--CCcEEEECcHHHHHHHHHHHhCC--------CCCEEEEeCc-cCHHHHHHHHhcC------------CceEEeCCC
Confidence 85 35667778899999888776543 4566776654 4554443333222 122233322
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-C-
Q psy14484 170 DSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-G- 247 (430)
Q Consensus 170 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~-g- 247 (430)
|++++++.++..+++++++++++ +++++|...+ +++|.++|++||+++|+||+|+ |
T Consensus 154 -----------------d~~~l~~~i~~~~~~~~lvi~~~-~~~~~G~~~~----l~~i~~ia~~~~~~li~De~~~~g~ 211 (385)
T PRK05958 154 -----------------DVDALEALLAKWRAGRALIVTES-VFSMDGDLAP----LAELVALARRHGAWLLVDEAHGTGV 211 (385)
T ss_pred -----------------CHHHHHHHHHhccCCCeEEEEEe-cccCCCCcCC----HHHHHHHHHHhCCEEEEECcccccc
Confidence 77889998875333578889999 9999997776 9999999999999999999996 2
Q ss_pred CCCccccccc-ccCCCCCc---eeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHH
Q psy14484 248 CGRTGKFFAC-EHAEIWPD---FLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLE 323 (430)
Q Consensus 248 ~g~~g~~~~~-~~~~~~~d---~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~ 323 (430)
+++.|..+.. ......+| +.++||+++. +.|++++++++.+.+... .+. +..+.+.+++.++++.++|+
T Consensus 212 ~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~---~Gg~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~aa~~aal~ 284 (385)
T PRK05958 212 LGPQGRGLAAEAGLAGEPDVILVGTLGKALGS---SGAAVLGSETLIDYLINR--ARP--FIFTTALPPAQAAAARAALR 284 (385)
T ss_pred cCCCCCchHHhhCCCCCCceEEEEechhhccc---CCcEEEcCHHHHHHHHHh--Ccc--ceecCCCCHHHHHHHHHHHH
Confidence 2333332211 11222455 5589999964 337888898888776531 111 22344567788878888888
Q ss_pred HHhhc-CHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-----
Q psy14484 324 IFNKD-NILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI----- 397 (430)
Q Consensus 324 ~~~~~-~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~----- 397 (430)
.++.. +..+++.++.+++.+.|+++ ... ..++.|.++.+.+. .. ..+.++++.|.++||.+.+.
T Consensus 285 ~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~---~~~~~~~~~~~~~~-~~-----~~~~~~~~~l~~~gI~v~~~~~~~~ 354 (385)
T PRK05958 285 ILRREPERRERLAALIARLRAGLRAL-GFQ---LMDSQSAIQPLIVG-DN-----ERALALAAALQEQGFWVGAIRPPTV 354 (385)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHc-CCC---cCCCCCCEEEEEeC-CH-----HHHHHHHHHHHHCCceEecccCCCC
Confidence 77553 56788888899999998875 222 23456777777665 31 11467999999999999752
Q ss_pred ---CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 398 ---GNTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 398 ---~~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
.+++|++++..++++++++++++|++++
T Consensus 355 ~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 355 PAGTSRLRITLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred CCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 2589999999999999999999998753
No 97
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.97 E-value=4.8e-29 Score=242.53 Aligned_cols=348 Identities=15% Similarity=0.176 Sum_probs=241.5
Q ss_pred CceeEEeecCCceeEEEECCCCEEEecccccccccCCCC-CHHHHHHHHHHHhhcccc-ccCC---CCCHHHHHHHHHHH
Q psy14484 13 NNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHS-NSYINKALKNQLNKLEHV-MLSN---LTHKPVIKLSEKLS 87 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~-~p~v~~a~~~~~~~~~~~-~~~~---~~~~~~~~l~~~l~ 87 (430)
.+.++.+..|. ++++.+|++++||.++ .+||++ +|++++++.+++.+.... ..+. +..+...++++.++
T Consensus 20 ~~~~~~~~~~~---~~~~~~g~~~i~~~~~---~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia 93 (393)
T TIGR01822 20 SERIITSPQGA---DIRVADGREVLNFCAN---NYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIA 93 (393)
T ss_pred cccccccCCCc---eEEecCCceEEEeeCC---CccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHH
Confidence 45566666666 6888899999999997 678886 999999999999874221 1112 33567789999999
Q ss_pred hhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeC
Q psy14484 88 SLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIIT 167 (430)
Q Consensus 88 ~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (430)
+.++ .+++++++||++|+..++..+.. +++.|++.++.|+...... ...+.. ....
T Consensus 94 ~~~g--~~~~ii~~~~~~a~~~~~~~l~~--------~gd~vi~~~~~~~s~~~~~-~~~~~~------------~~~~- 149 (393)
T TIGR01822 94 AFLG--TEDTILYASCFDANGGLFETLLG--------AEDAIISDALNHASIIDGV-RLCKAK------------RYRY- 149 (393)
T ss_pred HHhC--CCcEEEECchHHHHHHHHHHhCC--------CCCEEEEeccccHHHHHHH-HhcCCc------------eEEe-
Confidence 9995 35677779999999988876643 5678888777666543322 211110 1111
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHhC---CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecc
Q psy14484 168 TPDSRNINKGNSANEIARCAIFDLEILLKKN---HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEI 244 (430)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv 244 (430)
++ +|++++++.+++. ..++++|++++ +++++|.+.+ +++|.++|++||++||+||+
T Consensus 150 -~~---------------~d~~~l~~~i~~~~~~~~~~~~v~~~~-v~~~tG~~~~----l~~i~~la~~~~~~li~De~ 208 (393)
T TIGR01822 150 -AN---------------NDMADLEAQLKEARAAGARHRLIATDG-VFSMDGVIAP----LDEICDLADKYDALVMVDEC 208 (393)
T ss_pred -CC---------------CCHHHHHHHHHhhhhcCCCceEEEEeC-CccCCCCcCC----HHHHHHHHHHcCCEEEEECC
Confidence 11 2788999888753 12788999999 9999998877 99999999999999999999
Q ss_pred ccCCCCcccc--cccccCCC--CCcee--eeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHH
Q psy14484 245 AVGCGRTGKF--FACEHAEI--WPDFL--CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAA 318 (430)
Q Consensus 245 ~~g~g~~g~~--~~~~~~~~--~~d~~--~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa 318 (430)
|+ ++..+.. ...+..++ .+|++ ++||+++| +++|++++++++++.+.. ....+..++ +.++..++++
T Consensus 209 ~~-~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g--~r~G~~~~~~~~~~~l~~--~~~~~~~~~--~~~~~~~~a~ 281 (393)
T TIGR01822 209 HA-TGFLGPTGRGSHELCGVMGRVDIITGTLGKALGG--ASGGFTTARKEVVELLRQ--RSRPYLFSN--SLPPAVVGAS 281 (393)
T ss_pred cc-ccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhC--CCcEEEEeCHHHHHHHHH--hCccceecC--CCCHHHHHHH
Confidence 95 4333221 11222333 35776 68899875 589999999999887764 111122222 2245555667
Q ss_pred HHHHHHHhh-cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec
Q psy14484 319 LATLEIFNK-DNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI 397 (430)
Q Consensus 319 ~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~ 397 (430)
.++++.++. ++..++++++.+++.+.|+++ .... ..+.+.++.+.+. +. ..+.++++.|.++||.+...
T Consensus 282 ~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~---~~~~~~~~~i~~~-~~-----~~~~~l~~~L~~~gI~v~~~ 351 (393)
T TIGR01822 282 IKVLEMLEASNELRDRLWANTRYFRERMEAA-GFDI---KPADHPIIPVMLY-DA-----VLAQRFARRLLEEGIYVTGF 351 (393)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCC---CCCCCCEEEEEeC-CH-----HHHHHHHHHHHHCCeeEeee
Confidence 777876643 456788889999999988764 2221 1223445555444 21 11467999999999988631
Q ss_pred -------C-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 398 -------G-NTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 398 -------~-~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+ ..+|+++++.+++++|++++++|+++++++
T Consensus 352 ~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~~ 390 (393)
T TIGR01822 352 FYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGREL 390 (393)
T ss_pred CCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 2 469999999999999999999999987653
No 98
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.97 E-value=7.6e-29 Score=240.50 Aligned_cols=346 Identities=16% Similarity=0.181 Sum_probs=237.2
Q ss_pred CceeEEeecCCceeEEEECCCCEEEecccccccccCCC-CCHHHHHHHHHHHhhcccc----ccCCCCCHHHHHHHHHHH
Q psy14484 13 NNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGH-SNSYINKALKNQLNKLEHV----MLSNLTHKPVIKLSEKLS 87 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~----~~~~~~~~~~~~l~~~l~ 87 (430)
.+.++.+++|. +++ .+|++|+||.++ .++|| .+|++++++.+++.+.... ..+.+..+...+++++++
T Consensus 16 ~~~~~~~~~g~---~~~-~~g~~~id~~~~---~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~ 88 (385)
T TIGR01825 16 SIRVLESAQGP---RVR-VNGKEVINLSSN---NYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLA 88 (385)
T ss_pred cccccccCCCc---eEE-ECCceEEEeecc---CccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHH
Confidence 57778888776 799 999999999874 55899 7999999999998764321 122345678899999999
Q ss_pred hhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeC
Q psy14484 88 SLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIIT 167 (430)
Q Consensus 88 ~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (430)
+.++ . +..++.++|++++..+++.+.. +++.|++.++. |+.........+. ....++
T Consensus 89 ~~~g-~-~~~i~~~sG~~a~~~a~~~~~~--------~gd~vi~~~~~-~~~~~~~~~~~g~------------~~~~~~ 145 (385)
T TIGR01825 89 KFKK-T-EAALVFQSGFNTNQGVLSALLR--------KGDIVLSDELN-HASIIDGLRLTKA------------TKKIYK 145 (385)
T ss_pred HHhC-C-CcEEEECcHHHHHHHHHHHhCC--------CCCEEEEEccc-cHHHHHHHHhcCC------------ceEEeC
Confidence 9886 3 3445556779999988887653 45666665554 4443333222221 111222
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHhCC-CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc
Q psy14484 168 TPDSRNINKGNSANEIARCAIFDLEILLKKNH-NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV 246 (430)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~ 246 (430)
.+ |++++++.+.+.. .++++|++++ +++++|.+.+ +++|.++|++||+++|+||+|+
T Consensus 146 ~~-----------------d~~~l~~~l~~~~~~~~~~v~~~~-v~~~tG~~~~----~~~i~~l~~~~~~~li~De~~~ 203 (385)
T TIGR01825 146 HA-----------------DMDDLDRVLRENPSYGKKLIVTDG-VFSMDGDVAP----LPEIVELAERYGAVTYVDDAHG 203 (385)
T ss_pred CC-----------------CHHHHHHHHHhhccCCCeEEEEec-CCcCCCCccC----HHHHHHHHHHhCCEEEEECccc
Confidence 11 6778888777542 4688999999 9999998777 9999999999999999999997
Q ss_pred C--CCCcccccccccCCCCCc----eeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHH
Q psy14484 247 G--CGRTGKFFACEHAEIWPD----FLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALA 320 (430)
Q Consensus 247 g--~g~~g~~~~~~~~~~~~d----~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~ 320 (430)
. +++.|. .....+++.+| +.+|||++++ +.|++++++++++.+... ...+ ..+...++..++++.+
T Consensus 204 ~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~~---~gG~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~a~~~ 275 (385)
T TIGR01825 204 SGVMGEAGR-GTVHHFGLEDKVDIQVGTLSKAIGV---VGGYAAGHKELIEYLKNR--ARPF--LFSTAQPPAVVAALAA 275 (385)
T ss_pred ccCcCCCCC-ccHhhcCCCcCCcEEEEeccHHhhc---CCCEEecCHHHHHHHHHh--Cccc--cccCCCCHHHHHHHHH
Confidence 3 333332 12222333333 4689999963 447888898888877541 1111 1122346677778888
Q ss_pred HHHHHhh-cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec--
Q psy14484 321 TLEIFNK-DNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-- 397 (430)
Q Consensus 321 ~l~~~~~-~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-- 397 (430)
+++.+.+ .+..++++++.+++.+.|+++ ..+.. .+.+.++.+.+. . ...+..+++.|+++||.+.+.
T Consensus 276 al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~---~~~~~~~~~~~~-~-----~~~~~~~~~~L~~~gi~v~~~~~ 345 (385)
T TIGR01825 276 AVDELQRSPELMERLWDNTRFFKAGLGKL-GYDTG---GSETPITPVVIG-D-----EKAAQEFSRRLFDEGIFAQSIVF 345 (385)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCC---CCCCCEEEEEEC-C-----HHHHHHHHHHHHHCCcEEcccCC
Confidence 8876643 456778888889999988775 22221 233445555443 2 111357899999999988531
Q ss_pred -----C-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 398 -----G-NTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 398 -----~-~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+ ..+|++|++.++++++++++++|+++++++
T Consensus 346 ~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~~ 382 (385)
T TIGR01825 346 PTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKEL 382 (385)
T ss_pred CCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHHh
Confidence 2 689999999999999999999999988753
No 99
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.97 E-value=3.2e-28 Score=237.24 Aligned_cols=346 Identities=17% Similarity=0.190 Sum_probs=238.0
Q ss_pred eeEEeecCCceeEEEECCCCEEEecccccccccCCC-CCHHHHHHHHHHHhhcccccc----CCCCCHHHHHHHHHHHhh
Q psy14484 15 LVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGH-SNSYINKALKNQLNKLEHVML----SNLTHKPVIKLSEKLSSL 89 (430)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~----~~~~~~~~~~l~~~l~~~ 89 (430)
..+.+++|. +++|++|++|+||.++ .++|+ .+|++.+++++++.+..+... ..+..+..+++++.+++.
T Consensus 26 ~~~~~~~~~---~~~~~~g~~~i~l~~~---~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~ 99 (397)
T PRK06939 26 RVITSPQGA---DITVADGKEVINFCAN---NYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKF 99 (397)
T ss_pred ccccCCCCc---eEEecCCCeEEEeecc---CccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHH
Confidence 344555555 7999999999999875 45788 589999999999876432211 124457788999999999
Q ss_pred cCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC
Q psy14484 90 TQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP 169 (430)
Q Consensus 90 ~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (430)
++. .+.+++++ |++++..+++++.. +++.|++.++.|++......... .....++.+
T Consensus 100 ~g~-~~~i~~ts-G~~a~~~~~~~l~~--------~gd~vi~~~~~~~~~~~~~~~~~-------------~~~~~~~~~ 156 (397)
T PRK06939 100 LGT-EDAILYSS-CFDANGGLFETLLG--------KEDAIISDALNHASIIDGVRLCK-------------AKRYRYANN 156 (397)
T ss_pred hCC-CcEEEEcC-hHHHHHHHHHHhCC--------CCCEEEEEhhhhHHHHHHHHhcC-------------CceEEeCCC
Confidence 863 35555555 58999998887653 56788888888876543322211 111222221
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHhC---CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc
Q psy14484 170 DSRNINKGNSANEIARCAIFDLEILLKKN---HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV 246 (430)
Q Consensus 170 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~ 246 (430)
|++++++.+++. ..+++++++++ +++++|...+ +++|.++|++||+++|+||+|+
T Consensus 157 -----------------d~~~l~~~i~~~~~~~~~~~~v~~~~-v~~~~G~~~~----~~~l~~la~~~~~~li~De~~~ 214 (397)
T PRK06939 157 -----------------DMADLEAQLKEAKEAGARHKLIATDG-VFSMDGDIAP----LPEICDLADKYDALVMVDDSHA 214 (397)
T ss_pred -----------------CHHHHHHHHHhhhccCCCCeEEEEec-CcCCCCCcCC----HHHHHHHHHHhCCEEEEECccc
Confidence 678888888642 22688899998 8998887655 9999999999999999999996
Q ss_pred -CC-CCcccccccccCCC--CCcee--eeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHH
Q psy14484 247 -GC-GRTGKFFACEHAEI--WPDFL--CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALA 320 (430)
Q Consensus 247 -g~-g~~g~~~~~~~~~~--~~d~~--~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~ 320 (430)
|+ +..|.. .....++ .+|++ ++||+++| +++|++++++++++.+... ......+ .+.++..++++.+
T Consensus 215 ~g~~~~~~~~-~~~~~~~~~~~~i~~~S~sK~~~g--~r~G~v~~~~~~~~~l~~~--~~~~~~~--~~~~~~~~~a~~~ 287 (397)
T PRK06939 215 VGFVGENGRG-TVEHFGVMDRVDIITGTLGKALGG--ASGGYTAGRKEVIDWLRQR--SRPYLFS--NSLAPAIVAASIK 287 (397)
T ss_pred ccCcCCCCCC-HHHHcCCCCCCcEEEEECHHHhCc--cCceEEEeCHHHHHHHHHh--Ccccccc--CCCCHHHHHHHHH
Confidence 33 222321 2222333 35677 78999964 4899999999998887641 1111111 1234555666777
Q ss_pred HHHHHhh-cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec--
Q psy14484 321 TLEIFNK-DNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-- 397 (430)
Q Consensus 321 ~l~~~~~-~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-- 397 (430)
+++.+.. ++..++++++.+++.+.|+++ .... ..+.+.++.+.+. .. ..+.++++.|.++||.+.+.
T Consensus 288 al~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~---~~~~~~~~~~~~~-~~-----~~~~~~~~~L~~~gI~v~~~~~ 357 (397)
T PRK06939 288 VLELLEESDELRDRLWENARYFREGMTAA-GFTL---GPGEHPIIPVMLG-DA-----KLAQEFADRLLEEGVYVIGFSF 357 (397)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCc---CCCCCCEEEEEEC-CH-----HHHHHHHHHHHHCCceEeeeCC
Confidence 7776643 356778888888888888765 2211 2244556554443 21 11367999999999988642
Q ss_pred ------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 398 ------GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 398 ------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.+.+|+++++.++++++++++++|++++.++
T Consensus 358 ~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 358 PVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred CCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 2579999999999999999999999998765
No 100
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=4.9e-28 Score=231.96 Aligned_cols=337 Identities=16% Similarity=0.130 Sum_probs=242.8
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhcc-ccccCCCCCHHHHHHHHHHHhhcC--CCCCe-EEEcCCchHHHHH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLE-HVMLSNLTHKPVIKLSEKLSSLTQ--YKLGH-CFYGSDGASAVEV 109 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~-v~~~~sgteA~~~ 109 (430)
.+++|+..| ...+ ..++.+.+++.+++.... ++....+..++++.+++++.+..+ ..+++ |++|+|+++|+..
T Consensus 28 ~~vi~l~iG--~Pd~-~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~ 104 (393)
T COG0436 28 EDVIDLSIG--EPDF-PTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFL 104 (393)
T ss_pred CCEEEeCCC--CCCC-CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHH
Confidence 468887765 2222 256789999999988764 344455666788888888888865 34555 9999999999999
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC---CCCCCCCCCChhHHHHH
Q psy14484 110 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP---DSRNINKGNSANEIARC 186 (430)
Q Consensus 110 al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 186 (430)
++.++.. +++.||+++|+|..+.......++.+ +.++.. +.+..
T Consensus 105 ~~~a~~~--------pGDeVlip~P~Y~~y~~~~~~~gg~~-------------v~v~l~~~~~~f~~------------ 151 (393)
T COG0436 105 AFLALLN--------PGDEVLIPDPGYPSYEAAVKLAGGKP-------------VPVPLDEEENGFKP------------ 151 (393)
T ss_pred HHHHhcC--------CCCEEEEeCCCCcCHHHHHHhcCCEE-------------EEEeCCcCccCCcC------------
Confidence 9999887 67889999999998866655555432 233321 12333
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc-c-cccccCCC--
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-F-FACEHAEI-- 262 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~-~-~~~~~~~~-- 262 (430)
|+++|++++. +++++++++. ++|++| .+++++++++|.++|++||+++|.||+|.++.+.|. . ...+..+.
T Consensus 152 d~~~l~~~i~---~ktk~i~ln~-P~NPTG-av~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~ 226 (393)
T COG0436 152 DLEDLEAAIT---PKTKAIILNS-PNNPTG-AVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARD 226 (393)
T ss_pred CHHHHHhhcC---ccceEEEEeC-CCCCcC-cCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcc
Confidence 8999999996 4789999988 999999 778899999999999999999999999999988774 2 22222221
Q ss_pred -CCceeeeecccCC-CccccEEEEEc-HHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh----cCHHHHHH
Q psy14484 263 -WPDFLCLSKGITG-GYLPLSLVMTT-DKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK----DNILQRIS 335 (430)
Q Consensus 263 -~~d~~~~sK~l~g-G~~~ig~~~~~-~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~----~~~~~~~~ 335 (430)
...+-+|||.++- | ||+|+++++ +++.+.+.. +....+++.+.+++.++.++|+.-+. +...+.++
T Consensus 227 ~~i~i~s~SK~~~mtG-wRvG~~v~~~~~l~~~~~~------~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~ 299 (393)
T COG0436 227 RTITINSFSKTYGMTG-WRIGWVVGPPEELIAALRK------LKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYR 299 (393)
T ss_pred eEEEEecccccccccc-cceeEeecChHHHHHHHHH------HHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHH
Confidence 1223379998764 5 899999999 778777664 33455667888999999999873211 12224466
Q ss_pred HHHHHHHHHHHchhcCCCeeeEe-ecceEEEEEEeecCCccchhHHHHHHHHHHHC-CcEEeec---C-----CEEEEeC
Q psy14484 336 QDMKKITKALTSLITHPKIINFR-QKGMIWAFDVIIEDPEQIETFSKKFFVAALKN-ELLLRPI---G-----NTVYLMP 405 (430)
Q Consensus 336 ~~~~~l~~~l~~l~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~-Gv~~~~~---~-----~~lR~~~ 405 (430)
++.+.+.+.|.++ +++.... +.|.|+.|.-. +... + ..+|+..|+++ ||.+.|+ + +.+|+
T Consensus 300 ~rrd~l~~~l~~~---~g~~~~~~p~Ga~Y~~~~i-~~~~-d---~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRi-- 369 (393)
T COG0436 300 ERRDLLVEALNEI---GGLSVVKPPEGAFYLFPKI-PELL-D---SEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRL-- 369 (393)
T ss_pred HHHHHHHHHHHhc---CCeeeccCCCeeEEEEeec-CCCC-C---HHHHHHHHHHhCCEEEecccccCCCCCCCeEEE--
Confidence 6777777777655 4444444 66777776554 3221 1 35788887766 8999985 1 46787
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 406 PYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 406 ~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
++..+++++++++++|++.+...
T Consensus 370 s~~~~~~~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 370 SLATSEETLEEALRRLARFLAEY 392 (393)
T ss_pred EEecCHHHHHHHHHHHHHHHHhc
Confidence 56677799999999999988653
No 101
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.97 E-value=4.7e-28 Score=236.38 Aligned_cols=333 Identities=15% Similarity=0.191 Sum_probs=228.5
Q ss_pred CCCEEEecccccccccCCC-CCHHHHHHHHHHHhhccccc----cCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHH
Q psy14484 32 SGKRYLDAISSWWVNLFGH-SNSYINKALKNQLNKLEHVM----LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASA 106 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~----~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA 106 (430)
+|+++++|.++ +++|. .||++++++.++++++.... ......+...+|++.+++.++ . +..++++||++|
T Consensus 44 ~~~~~~~~~sn---~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g-~-~~~i~~~sG~~a 118 (410)
T PRK13392 44 GPRRVTIWCSN---DYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHG-K-ESALLFTSGYVS 118 (410)
T ss_pred CCceEEEEECC---CccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhC-C-CCEEEECcHHHH
Confidence 57899999985 66777 59999999999998764321 112234567899999999996 3 566777788999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 186 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (430)
+..+++.+.... +++ +|+.+..+|+.........+. +...++.+
T Consensus 119 ~~~~i~~l~~~~------~g~-~vi~~~~~h~s~~~~~~~~g~------------~~~~~~~~----------------- 162 (410)
T PRK13392 119 NDAALSTLGKLL------PGC-VILSDALNHASMIEGIRRSGA------------EKQVFRHN----------------- 162 (410)
T ss_pred HHHHHHHHhcCC------CCC-EEEEehhhhHHHHHHHHHcCC------------eEEEEeCC-----------------
Confidence 999998654321 233 555566788775544433331 11222211
Q ss_pred HHHHHHHHHHhC-CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-CC-CCcccccccccCCC-
Q psy14484 187 AIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-GC-GRTGKFFACEHAEI- 262 (430)
Q Consensus 187 d~~~le~~l~~~-~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~-g~-g~~g~~~~~~~~~~- 262 (430)
|.+.+++.+++. ++++++|++++ ++|++|.+.+ +++|.++|++||+++|+||+|+ |+ +..|..+ .+..++
T Consensus 163 d~~~l~~~l~~~~~~~t~~v~i~~-~~n~tG~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~-~~~~~~~ 236 (410)
T PRK13392 163 DLADLEEQLASVDPDRPKLIAFES-VYSMDGDIAP----IEAICDLADRYNALTYVDEVHAVGLYGARGGGI-AERDGLM 236 (410)
T ss_pred CHHHHHHHHHhccCCCCEEEEEeC-CCCCCccccc----HHHHHHHHHHcCCEEEEECCccccCcCCCCCch-hhhccCC
Confidence 455666666544 35788999999 9999998887 9999999999999999999998 44 4444332 233333
Q ss_pred -CCcee--eeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhc-CHHHHHHHHH
Q psy14484 263 -WPDFL--CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD-NILQRISQDM 338 (430)
Q Consensus 263 -~~d~~--~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~-~~~~~~~~~~ 338 (430)
.+|++ +|||+++. +-|++++++++++.+.. ...++ ..+...++++++++.++|+.++.. ...++++++.
T Consensus 237 ~~~div~~tlsK~~g~---~GG~~~~~~~~~~~l~~--~~~~~--~~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~ 309 (410)
T PRK13392 237 DRIDMIQGTLAKAFGC---LGGYIAASADLIDFVRS--FAPGF--IFTTALPPAVAAGATAAIRHLKTSQTERDAHQDRV 309 (410)
T ss_pred CCCcEEEEEChHhhhc---ccchhhcCHHHHHHHHH--hCcch--hccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 35766 89999874 22678888888887664 11111 224445677788888899876543 3345677788
Q ss_pred HHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec--------CCEEEEeCCCCC
Q psy14484 339 KKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI--------GNTVYLMPPYIL 409 (430)
Q Consensus 339 ~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~--------~~~lR~~~~~~~ 409 (430)
+++++.|+++ ..+. .++.+.++.+.+. .. ..+.++++.|+ ++||++.+. ..++|++++..+
T Consensus 310 ~~l~~~L~~~-g~~~---~~~~~~~~~i~~~-~~-----~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~ 379 (410)
T PRK13392 310 AALKAKLNAN-GIPV---MPSPSHIVPVMVG-DP-----TLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLH 379 (410)
T ss_pred HHHHHHHHHc-CCCC---CCCCCCEEEEEeC-CH-----HHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCC
Confidence 8888888765 2222 2345666554443 21 11367889886 679999863 158999999999
Q ss_pred CHHHHHHHHHHHHHHHHHh
Q psy14484 410 NKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 410 t~e~i~~~~~~l~~~l~~~ 428 (430)
|++|+++++++|+++++++
T Consensus 380 t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 380 DDEDIDALVAALVAIWDRL 398 (410)
T ss_pred CHHHHHHHHHHHHHHHHHc
Confidence 9999999999999988754
No 102
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.97 E-value=3.6e-27 Score=226.76 Aligned_cols=335 Identities=15% Similarity=0.127 Sum_probs=227.2
Q ss_pred EeecCCceeEEEECCCCEEEecccccccccCCC-CCHHHHHHHHHHHhhcccccc----CCCCCHHHHHHHHHHHhhcCC
Q psy14484 18 RSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGH-SNSYINKALKNQLNKLEHVML----SNLTHKPVIKLSEKLSSLTQY 92 (430)
Q Consensus 18 ~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~----~~~~~~~~~~l~~~l~~~~~~ 92 (430)
.++.|. ++. .+|++||||.+| +++|+ .+|++++++.+++........ ..+..+...++++.++++++
T Consensus 4 ~~~~~~---~~~-~~g~~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~- 75 (360)
T TIGR00858 4 DRGPGP---EVV-RDGRRLLNFSSN---DYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKG- 75 (360)
T ss_pred ccCCCC---eEE-ECCceEEecccC---CcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC-
Confidence 345555 565 799999999997 57996 789999999999876432211 12234677889999999886
Q ss_pred CCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCC
Q psy14484 93 KLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSR 172 (430)
Q Consensus 93 ~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (430)
..+ .+++++|++++..+++++.. +++.|++.++.|..... .....+ ..+..++.+
T Consensus 76 ~~~-~i~~~~G~~~~~~~l~~~~~--------~gd~v~~~~~~~~~~~~-~~~~~g------------~~~~~~~~~--- 130 (360)
T TIGR00858 76 TEA-ALLFSSGYLANVGVISALVG--------KGDLILSDALNHASLID-GCRLSG------------ARVRRYRHN--- 130 (360)
T ss_pred CCC-EEEECchHHHHHHHHHHhCC--------CCCEEEEEccccHHHHH-HHHhcC------------CceEEecCC---
Confidence 334 45556668888877776543 56677777666554322 222111 122233322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHhCC-CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCc
Q psy14484 173 NINKGNSANEIARCAIFDLEILLKKNH-NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRT 251 (430)
Q Consensus 173 ~~~~~~~~~~~~~~d~~~le~~l~~~~-~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~ 251 (430)
|++++++.+++.. .+++++++++ +++++|...+ +++|.++|+++|+++|+||+|+ ++..
T Consensus 131 --------------d~~~l~~~~~~~~~~~~~~v~~~~-~~~~~G~~~~----~~~i~~l~~~~~~~li~De~~~-~~~~ 190 (360)
T TIGR00858 131 --------------DVEHLERLLEKNRGERRKLIVTDG-VFSMDGDIAP----LPQLVALAERYGAWLMVDDAHG-TGVL 190 (360)
T ss_pred --------------CHHHHHHHHHHcccCCCeEEEEeC-CccCCCCCcC----HHHHHHHHHHcCcEEEEECccc-ccCc
Confidence 7788999887543 3578888999 8888887777 9999999999999999999997 3332
Q ss_pred cc--ccccccCCCCCc-----eeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHH
Q psy14484 252 GK--FFACEHAEIWPD-----FLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEI 324 (430)
Q Consensus 252 g~--~~~~~~~~~~~d-----~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~ 324 (430)
+. .......++.++ +.+|||++++ +.|++++++++++.+... ... +..+.+.++..++++.++++.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~---~gG~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~a~~~al~~ 263 (360)
T TIGR00858 191 GEDGRGTLEHFGLKPEPVDIQVGTLSKALGS---YGAYVAGSQALIDYLINR--ART--LIFSTALPPAVAAAALAALEL 263 (360)
T ss_pred CCCCCchHHhcCCCccCCcEEEEechhhhhc---cCcEEEcCHHHHHHHHHh--Ccc--ceecCCCCHHHHHHHHHHHHH
Confidence 21 111233344333 5589999875 337899998888776530 111 112233456667777788876
Q ss_pred Hhh-cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec------
Q psy14484 325 FNK-DNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI------ 397 (430)
Q Consensus 325 ~~~-~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~------ 397 (430)
++. ++..++++++.+++.+.|+++ ... .....+.++++.+. .. ..+.++++.|.++||.+.+.
T Consensus 264 ~~~~~~~~~~~~~~~~~l~~~L~~~-~~~---~~~~~~~~~~~~~~-~~-----~~~~~~~~~l~~~gI~v~~~~~~~~~ 333 (360)
T TIGR00858 264 IQEEPWRREKLLALIARLRAGLEAL-GFT---LMPSCTPIVPVIIG-DN-----ASALALAEELQQQGIFVGAIRPPTVP 333 (360)
T ss_pred HhhCHHHHHHHHHHHHHHHHHHHHc-CCc---cCCCCCCEEEEEeC-CH-----HHHHHHHHHHHHCCeeEeeeCCCCCC
Confidence 543 356788888999999999875 222 12345667777665 21 11367999999999999742
Q ss_pred --CCEEEEeCCCCCCHHHHHHHHHHHH
Q psy14484 398 --GNTVYLMPPYILNKNEIQHMTSAIF 422 (430)
Q Consensus 398 --~~~lR~~~~~~~t~e~i~~~~~~l~ 422 (430)
++++|++++..++++++++++++|+
T Consensus 334 ~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 334 AGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred CCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 2589999999999999999998874
No 103
>KOG1359|consensus
Probab=99.96 E-value=1.5e-27 Score=206.18 Aligned_cols=340 Identities=16% Similarity=0.177 Sum_probs=246.9
Q ss_pred CceeEEeecCCceeEEEECCC--CEEEecccccccccCCC-CCHHHHHHHHHHHhhcccccc----CCCCCHHHHHHHHH
Q psy14484 13 NNLVIRSLKNSWKWSLIDVSG--KRYLDAISSWWVNLFGH-SNSYINKALKNQLNKLEHVML----SNLTHKPVIKLSEK 85 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~g--~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~----~~~~~~~~~~l~~~ 85 (430)
...++.+.+++ .+..+| +.+|.|++| ++||. +||+|.+|-++++.+++.... -.+....+..|+.+
T Consensus 48 ~erVi~s~q~p----~i~v~G~~k~ilnFcaN---nYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~k 120 (417)
T KOG1359|consen 48 RERVITSRQGP----TIQVKGSDKKILNFCAN---NYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESK 120 (417)
T ss_pred eeeEEeecccc----eEEEeccccceeeeccc---ccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHH
Confidence 35677888887 344555 689999986 78998 599999999999998764421 23566888999999
Q ss_pred HHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeE
Q psy14484 86 LSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYI 165 (430)
Q Consensus 86 l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (430)
++++. +.|..++.+++-.||..++.++.. +++-| .-+.-.|.+.+....+.. .| .+
T Consensus 121 iAqfh--~rED~ilypscfdANag~feail~--------pedAv-fSDeLNhASIIdGirLck--ry-----------~h 176 (417)
T KOG1359|consen 121 IAQFH--GREDTILYPSCFDANAGAFEAILT--------PEDAV-FSDELNHASIIDGIRLCK--RY-----------RH 176 (417)
T ss_pred HHHHh--CCCceEEeccccccchHHHHHhcC--------hhhhh-hccccccchhhhhhHHHh--hh-----------cc
Confidence 99998 678899999999999999988864 44433 334456666554444322 00 01
Q ss_pred eCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhC-CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecc
Q psy14484 166 ITTPDSRNINKGNSANEIARCAIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEI 244 (430)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~-~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv 244 (430)
.|+.+++..+.+. ..+.++|+++. +.++.|.+.| +++|.++++|||.++.+||+
T Consensus 177 --------------------~dv~~l~~~l~~a~k~r~klv~TDg-~FSMDGdiaP----l~ei~~La~kYgaLlfiDec 231 (417)
T KOG1359|consen 177 --------------------VDVFDLEHCLISACKMRLKLVVTDG-VFSMDGDIAP----LEEISQLAKKYGALLFIDEC 231 (417)
T ss_pred --------------------chhHHHHHHHHHhhhheEEEEEecc-eeccCCCccc----HHHHHHHHHhcCcEEEEeec
Confidence 1566666665543 45789999999 9999999999 99999999999999999999
Q ss_pred cc-CC-CCcccccccccCCC--CCcee--eeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHH
Q psy14484 245 AV-GC-GRTGKFFACEHAEI--WPDFL--CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAA 318 (430)
Q Consensus 245 ~~-g~-g~~g~~~~~~~~~~--~~d~~--~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa 318 (430)
|. || |.+|. +.-+..++ .+|++ |+||++||. .-|++.+++++.+.+++ +.+++..+++..+..+++ +
T Consensus 232 HaTgf~G~tGr-Gt~E~~~vm~~vdiinsTLgKAlGga--~GGyttgp~~li~llrq--r~RpylFSnslppavV~~--a 304 (417)
T KOG1359|consen 232 HATGFFGETGR-GTAEEFGVMGDVDIINSTLGKALGGA--SGGYTTGPKPLISLLRQ--RSRPYLFSNSLPPAVVGM--A 304 (417)
T ss_pred ccceeecCCCC-ChHHHhCCCCcceehhhhhhhhhcCC--CCCCccCChhHHHHHHh--cCCceeecCCCChhhhhh--h
Confidence 87 33 44443 22344554 46766 799999872 34679999999999987 778888777765444433 4
Q ss_pred HHHHHH-HhhcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecc-eEEEEEEeecCCccchhHHHHHHHHHHHCCcEEee
Q psy14484 319 LATLEI-FNKDNILQRISQDMKKITKALTSLITHPKIINFRQKG-MIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP 396 (430)
Q Consensus 319 ~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~ 396 (430)
.++++. +......++.+.+.++|++.++.. .. .+.+.. .+.-+.+. ....+.++++.|+++|+++..
T Consensus 305 ~ka~dllm~s~~~i~~~~a~~qrfr~~me~a-Gf----tIsg~~hPI~pv~lG------da~lA~~~ad~lLk~Gi~Vig 373 (417)
T KOG1359|consen 305 AKAYDLLMVSSKEIQSRQANTQRFREFMEAA-GF----TISGASHPICPVMLG------DARLASKMADELLKRGIYVIG 373 (417)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc-Cc----eecCCCCCccceecc------cHHHHHHHHHHHHhcCceEEe
Confidence 455553 345677888899999999988754 11 111111 22223333 344578999999999999873
Q ss_pred c--------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 397 I--------GNTVYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 397 ~--------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
. ...||+.++..||+||||++++++.++.+
T Consensus 374 fs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr 411 (417)
T KOG1359|consen 374 FSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGR 411 (417)
T ss_pred ecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHH
Confidence 2 25799999999999999999999998865
No 104
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=2.8e-27 Score=227.77 Aligned_cols=325 Identities=11% Similarity=0.101 Sum_probs=217.0
Q ss_pred EEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCC----HHHHHHHHHHHhhc--CCCCCeEEEcCCchHHHH
Q psy14484 35 RYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTH----KPVIKLSEKLSSLT--QYKLGHCFYGSDGASAVE 108 (430)
Q Consensus 35 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~----~~~~~l~~~l~~~~--~~~~~~v~~~~sgteA~~ 108 (430)
..+|+..| .++++ .+|.+++++.+.+....... ..|+. ++.+.+++++.+.. +.++++|++|+|+++++.
T Consensus 27 ~~i~l~~~--~~~~~-~~~~~~~al~~~l~~~~~~~-~~Y~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~ 102 (368)
T PRK03317 27 VPVRLNTN--ENPYP-PSPALVADIAEAVAEAAAGL-NRYPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQ 102 (368)
T ss_pred ceeEecCC--CCCCC-CCHHHHHHHHHHHhhhhhhh-ccCCCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHH
Confidence 46887776 55665 68899999998865321111 12232 34444555554433 457789999999999999
Q ss_pred HHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHH
Q psy14484 109 VALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAI 188 (430)
Q Consensus 109 ~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 188 (430)
.+++++.. +++.|++..|+|+++.......+ .....++..+.+.. |+
T Consensus 103 ~~~~~~~~--------~gd~v~v~~P~y~~~~~~~~~~g-------------~~~~~~~~~~~~~~------------d~ 149 (368)
T PRK03317 103 QLLQAFGG--------PGRTALGFVPSYSMHPIIARGTH-------------TEWVEGPRAADFTL------------DV 149 (368)
T ss_pred HHHHHhcC--------CCCEEEEeCCChHHHHHHHHhcC-------------CeeEEcccCCCCCC------------CH
Confidence 99998875 66789999999988754332211 11122222222222 78
Q ss_pred HHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCcee-
Q psy14484 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL- 267 (430)
Q Consensus 189 ~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~- 267 (430)
+++++++.+ .+++++++.. ++|++|...+ .+++.++|+..++++|+||+|++|++.|........+..|+++
T Consensus 150 ~~l~~~~~~--~~~~~i~l~~-p~NPtG~~~~----~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~ 222 (368)
T PRK03317 150 DAAVAAIAE--HRPDVVFLTS-PNNPTGTALP----LDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVV 222 (368)
T ss_pred HHHHHHHhc--cCCCEEEEeC-CCCCCCCCCC----HHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEE
Confidence 999998874 2445555666 7888996766 6666677776689999999999887665433333334456766
Q ss_pred --eeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh-cCHHHHHHHHHHHHHH
Q psy14484 268 --CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK-DNILQRISQDMKKITK 343 (430)
Q Consensus 268 --~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~-~~~~~~~~~~~~~l~~ 343 (430)
+|||+++ .| +|+|++++++++++.+.. ...++..+++++.++.++|+..+. .+..+++++..+++.+
T Consensus 223 ~~SfSK~~g~~G-lRiG~~~~~~~~~~~l~~--------~~~~~~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~ 293 (368)
T PRK03317 223 SRTMSKAFAFAG-GRLGYLAAAPAVVDALRL--------VRLPYHLSAVTQAAARAALRHADELLASVAALRAERDRVVA 293 (368)
T ss_pred EEechhhhccch-hhhhhhhCCHHHHHHHHh--------cCCCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHH
Confidence 8999997 57 899999999999988875 224677888988888888864321 1122334444445555
Q ss_pred HHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC--CEEEEeCCCCCCHHHHHHHHHHH
Q psy14484 344 ALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG--NTVYLMPPYILNKNEIQHMTSAI 421 (430)
Q Consensus 344 ~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~--~~lR~~~~~~~t~e~i~~~~~~l 421 (430)
.|+.. + +....+.|.++.+... . . +..+++.|+++||.+.+.+ +++|++++ +++++++++++|
T Consensus 294 ~L~~~---g-~~~~~~~~~~~~~~~~-~----~---~~~~~~~l~~~Gv~v~~~~~~~~iRi~~~---~~~~~~~~~~~l 358 (368)
T PRK03317 294 WLREL---G-LRVAPSDANFVLFGRF-A----D---RHAVWQGLLDRGVLIRDVGIPGWLRVTIG---TPEENDAFLAAL 358 (368)
T ss_pred HHHHC---C-CEeCCCCCcEEEEecc-C----C---HHHHHHHHHHCCEEEEeCCCCCeEEEecC---CHHHHHHHHHHH
Confidence 55432 2 2233456666555222 1 1 3678999999999998864 78999855 788999999999
Q ss_pred HHHHHH
Q psy14484 422 FQTFNE 427 (430)
Q Consensus 422 ~~~l~~ 427 (430)
++++..
T Consensus 359 ~~~~~~ 364 (368)
T PRK03317 359 AEVLAT 364 (368)
T ss_pred HHHHHH
Confidence 998764
No 105
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.96 E-value=4.7e-27 Score=216.37 Aligned_cols=340 Identities=15% Similarity=0.110 Sum_probs=229.0
Q ss_pred EEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCC-------CHHHHHHHHHHHhhcCCCCCeEEEcCCchHHH
Q psy14484 35 RYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLT-------HKPVIKLSEKLSSLTQYKLGHCFYGSDGASAV 107 (430)
Q Consensus 35 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~-------~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~ 107 (430)
-|+|..+... -+|++++++...+... ++++.-. ....++.++++++++++++++|+||+||||++
T Consensus 3 iYlD~~ATTp------~~~~v~~~m~~~~~~~--fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsn 74 (386)
T COG1104 3 IYLDNAATTP------VDPEVLEAMLPYLTEV--FGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESN 74 (386)
T ss_pred ccccccccCC------CCHHHHHHHHHHHHhh--cCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHH
Confidence 4788777632 3799999999988764 1111112 25667888899999999999999999999999
Q ss_pred HHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHH
Q psy14484 108 EVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCA 187 (430)
Q Consensus 108 ~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 187 (430)
++|++.+....+.+ ++.+.|+.+...|.....+..... ....++.++++..+... |
T Consensus 75 NlaI~g~~~a~~~~---~~~~HIIts~iEH~aVl~~~~~Le---------~~g~~Vtyl~V~~~G~v------------~ 130 (386)
T COG1104 75 NLAIKGAALAYRNA---QKGKHIITSAIEHPAVLNTCRYLE---------RQGFEVTYLPVDSNGLV------------D 130 (386)
T ss_pred HHHHHhhHHhhhcc---cCCCeEEEcccccHHHHHHHHHHH---------hcCCeEEEeCCCCCCeE------------c
Confidence 99999765443222 344556667788876544433221 22345566666554443 8
Q ss_pred HHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCcee
Q psy14484 188 IFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL 267 (430)
Q Consensus 188 ~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~ 267 (430)
+++|+++|+ +++.+|.+.. +||++|+++| +++|.++|+++++++|+|.||+ +|+.. ++......|++
T Consensus 131 ~e~L~~al~---~~T~LVSim~-aNnE~G~IQp----I~ei~~i~k~~~i~fHvDAvQa-~Gkip----i~~~~~~vD~l 197 (386)
T COG1104 131 LEQLEEALR---PDTILVSIMH-ANNETGTIQP----IAEIGEICKERGILFHVDAVQA-VGKIP----IDLEELGVDLL 197 (386)
T ss_pred HHHHHHhcC---CCceEEEEEe-cccCeeeccc----HHHHHHHHHHcCCeEEEehhhh-cCcee----ccccccCcceE
Confidence 999999997 6799999999 9999999999 9999999999999999999997 87652 33333347999
Q ss_pred eeecccCCCccccEEEEEcHHHH-HhhhccCCcccccccCCCCCCHHHHHHHHHHHHHH--hhcCHHHHHHHHHHHHHHH
Q psy14484 268 CLSKGITGGYLPLSLVMTTDKIY-NSIYYKNNINIFLHSHSYSGNPLACCAALATLEIF--NKDNILQRISQDMKKITKA 344 (430)
Q Consensus 268 ~~sK~l~gG~~~ig~~~~~~~~~-~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~--~~~~~~~~~~~~~~~l~~~ 344 (430)
+||-.--+|.-.+|+++.++.+. ..+..++.+..-..++|- |..+.++..+++++. +.+...++++.+.++|.+.
T Consensus 198 s~SaHK~~GpkGiGaLyv~~~~~~~p~i~GGgQE~g~RsGTe--nv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~ 275 (386)
T COG1104 198 SFSAHKFGGPKGIGALYVRPGVRLEPLIHGGGQERGLRSGTE--NVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDG 275 (386)
T ss_pred EeehhhccCCCceEEEEECCCCccCceeccCcCCCCCCCCCc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99964333335799999987653 223222333233344444 333333333444432 2245677888889999888
Q ss_pred HHch-hcCCCeee-EeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEee------------------------cC
Q psy14484 345 LTSL-ITHPKIIN-FRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP------------------------IG 398 (430)
Q Consensus 345 l~~l-~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~------------------------~~ 398 (430)
|.+. +..-.... .......+.+.++ .- + .+.+...|..+||.++. ..
T Consensus 276 l~~~~p~~~~~g~~~~rlP~~~~~~f~-gv----~--gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~ 348 (386)
T COG1104 276 LLEIIPDVYLNGDDEPRLPNILNFSFP-GV----E--GESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAH 348 (386)
T ss_pred HHhcCCcEEEcCCcccCCCCeEEEEeC-CC----c--HHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhC
Confidence 8754 22111111 1223334444444 21 1 24455566666776653 23
Q ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 399 NTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 399 ~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
..|||+++..+|++|++.+++.|++++.++
T Consensus 349 ~siR~S~g~~tt~eei~~~~~~l~~~i~~l 378 (386)
T COG1104 349 GSIRFSLGRFTTEEEIDAAAEALKEIIKRL 378 (386)
T ss_pred ccEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 689999999999999999999999998764
No 106
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.96 E-value=2.4e-27 Score=227.07 Aligned_cols=319 Identities=12% Similarity=0.152 Sum_probs=223.5
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVAL 111 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al 111 (430)
+++.++|+..| .+++| .+|++++++.+.+.... .|+.....++++.+++.+++++++|++++|++|++..++
T Consensus 27 ~~~~~i~l~~n--en~~~-~~~~v~~a~~~~~~~~~-----~Yp~~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~ 98 (366)
T PRK01533 27 GDHSFVKLASN--ENPFG-CSPRVLDELQKSWLDHA-----LYPDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQIIS 98 (366)
T ss_pred CCCceEEeCCC--CCCCC-CCHHHHHHHHHHHHhcC-----cCCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHH
Confidence 34678998887 67787 67899999988765532 234444567888888888888999999999999999999
Q ss_pred HHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHH
Q psy14484 112 KMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDL 191 (430)
Q Consensus 112 ~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 191 (430)
+++.. +++.|++.+|+|.++...+...+ ..+..++.++ ... |++++
T Consensus 99 ~~l~~--------~gd~vlv~~P~y~~~~~~~~~~g-------------~~v~~v~~~~-~~~------------d~~~l 144 (366)
T PRK01533 99 RAVLK--------AGDNIVTAGATFPQYRHHAIIEG-------------CEVKEVALNN-GVY------------DLDEI 144 (366)
T ss_pred HHhcC--------CCCEEEEcCCcHHHHHHHHHHcC-------------CEEEEeecCC-CCc------------CHHHH
Confidence 98764 56789999999987754333221 2223343321 111 78999
Q ss_pred HHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccc-cccccCCCCCc---ee
Q psy14484 192 EILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FACEHAEIWPD---FL 267 (430)
Q Consensus 192 e~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~-~~~~~~~~~~d---~~ 267 (430)
+++++ ++++++++.. ++|++|. ..+.+.+++|.++|++++ ++|+||+|..|...+.. .........+. +-
T Consensus 145 ~~~~~---~~~~~v~i~~-P~NPTG~-~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~ 218 (366)
T PRK01533 145 SSVVD---NDTKIVWICN-PNNPTGT-YVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLR 218 (366)
T ss_pred HHHhC---cCCcEEEEeC-CCCCCCC-CcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEe
Confidence 88885 3455666666 7888884 556777899999998876 67789999876433211 11111111223 33
Q ss_pred eeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHH----HHHHHHHH
Q psy14484 268 CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRI----SQDMKKIT 342 (430)
Q Consensus 268 ~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~----~~~~~~l~ 342 (430)
+|||.++ .| +|+|++++++++++.+.. ...+++.+.+++.++.++|+ +.++.+.+ ++..+++.
T Consensus 219 SfSK~~~l~G-lRiG~~i~~~~~~~~l~~--------~~~~~~~~~~~q~aa~~~l~---~~~~~~~~~~~~~~~r~~~~ 286 (366)
T PRK01533 219 TFSKAYGLAS-FRVGYAVGHEELIEKLNV--------VRLPFNVSSLAQKAATIAFG---DDEFIEEIVRVNTEGLRQYE 286 (366)
T ss_pred CchHHhcChH-HHHhHHhCCHHHHHHHHH--------hcCCCCcCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHH
Confidence 7999998 56 899999999999988875 22457788888888888875 23344333 33444444
Q ss_pred HHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecCCEEEEeCCCCCCHHHHHHHHHHHH
Q psy14484 343 KALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIF 422 (430)
Q Consensus 343 ~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~ 422 (430)
+.++.+ + +...++.|+|+++.+. + +..+.+.|+++||.+++.++++|+++. +.++.+.++++|+
T Consensus 287 ~~l~~~---g-~~~~~~~~nf~~~~~~-~--------~~~~~~~l~~~GI~Vr~~~~~iRis~~---~~~~~~~l~~al~ 350 (366)
T PRK01533 287 SFCKEN---E-IPFYQSQTNFIFLPVE-N--------GGEIYEACAHAGFIIRPFPNGVRITVG---TREQNEGVISVLQ 350 (366)
T ss_pred HHHHhC---C-CccCCCcCcEEEEeCC-C--------HHHHHHHHHHCCcEEccCCCceEEeCC---CHHHHHHHHHHHH
Confidence 444433 2 2234567888888764 2 256889999999999998889999866 9999999999999
Q ss_pred HHHH
Q psy14484 423 QTFN 426 (430)
Q Consensus 423 ~~l~ 426 (430)
+++.
T Consensus 351 ~~~~ 354 (366)
T PRK01533 351 QHFE 354 (366)
T ss_pred HHHH
Confidence 8765
No 107
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.96 E-value=5.4e-26 Score=218.60 Aligned_cols=323 Identities=13% Similarity=0.140 Sum_probs=217.9
Q ss_pred CCEEEecccccccccCCCC-CHHHHHHHHHHHhhcc-------cccc----CCCCCHHHHHHHHHHHhhcCCCCCeEEEc
Q psy14484 33 GKRYLDAISSWWVNLFGHS-NSYINKALKNQLNKLE-------HVML----SNLTHKPVIKLSEKLSSLTQYKLGHCFYG 100 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~-~p~v~~a~~~~~~~~~-------~~~~----~~~~~~~~~~l~~~l~~~~~~~~~~v~~~ 100 (430)
..+++||+|+ ++||++ +|++.+++.+++.++. .... ....++.++++++.++++++. +..+++
T Consensus 3 ~~~~~~~~s~---~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~--~~~l~~ 77 (370)
T PRK05937 3 ESLSIDFVTN---DFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGA--PEAFIV 77 (370)
T ss_pred CCceEEeECC---CccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCC--CeEEEE
Confidence 3468899885 789984 8999999999887752 1111 112457889999999999963 566788
Q ss_pred CCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCCh
Q psy14484 101 SDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSA 180 (430)
Q Consensus 101 ~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (430)
++|+.|+...+.... +++.+|+.+..+|++....+.... . ..+++++
T Consensus 78 ~sG~~a~~~~~~~~~---------~~~d~ii~d~~~H~sv~~~~~~~~--~------------~~~~~~~---------- 124 (370)
T PRK05937 78 PSGYMANLGLCAHLS---------SVTDYVLWDEQVHISVVYSLSVIS--G------------WHQSFRH---------- 124 (370)
T ss_pred CChHHHHHHHHHHhC---------CCCCEEEEEhhhhHHHHHHHHHcC--C------------ceEEecC----------
Confidence 888888864433321 345688899999998766554321 0 0122232
Q ss_pred hHHHHHHHHHHHHHHHhCC---CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-C-CCCccccc
Q psy14484 181 NEIARCAIFDLEILLKKNH---NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-G-CGRTGKFF 255 (430)
Q Consensus 181 ~~~~~~d~~~le~~l~~~~---~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~-g-~g~~g~~~ 255 (430)
+|+++|+++++... +++.+|++++ +++++|.+.| +++|.++|+++|+++|+||+|+ | ++.+|..+
T Consensus 125 -----~d~~~l~~~l~~~~~~~~~~~~v~v~~-v~s~~G~i~p----l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~ 194 (370)
T PRK05937 125 -----NDLDHLESLLESCRQRSFGRIFIFVCS-VYSFKGTLAP----LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGF 194 (370)
T ss_pred -----CCHHHHHHHHHhhhccCCCcEEEEEec-CCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCCCch
Confidence 28899999987531 3466788899 9999999998 9999999999999999999998 3 44444322
Q ss_pred ccccCC---CCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhc--CH
Q psy14484 256 ACEHAE---IWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD--NI 330 (430)
Q Consensus 256 ~~~~~~---~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~--~~ 330 (430)
. ..++ ..+|+.||||++|+. -+++++.+++.+.+.. ...+.. .+.+.++++++++.++++.+.+. ..
T Consensus 195 ~-~~~~~~~~~~~~~tlsK~~g~~---G~~vl~~~~~~~~~~~--~~~~~~--~s~~~~~~~~~a~~aal~~l~~~~~~~ 266 (370)
T PRK05937 195 C-HSLGYENFYAVLVTYSKALGSM---GAALLSSSEVKQDLML--NSPPLR--YSTGLPPHLLISIQVAYDFLSQEGELA 266 (370)
T ss_pred H-HhhCCCCCcEEEEechhhhhcC---ceEEEcCHHHHHHHHH--hCCCCe--ecCCCCHHHHHHHHHHHHHHHhCcHHH
Confidence 1 1122 236778999998752 1345566665554442 111222 23345777777777888877543 24
Q ss_pred HHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEee----cCCEEEEeCC
Q psy14484 331 LQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP----IGNTVYLMPP 406 (430)
Q Consensus 331 ~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~----~~~~lR~~~~ 406 (430)
.++++++.+++++.|... .+ +....+.+. .. . ...+.+.|.++||.+.. ....+||+++
T Consensus 267 ~~~l~~l~~~l~~~l~~~--~~--------~~~~~i~~~-~~----~--~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~ 329 (370)
T PRK05937 267 RKQLFRLKEYFAQKFSSA--AP--------GCVQPIFLP-GI----S--EQELYSKLVETGIRVGVVCFPTGPFLRVNLH 329 (370)
T ss_pred HHHHHHHHHHHHHhcCCC--CC--------CCEEEEEeC-Ch----h--HHHHHHHHHHCCeeEEeeCCCCCCEEEEEcC
Confidence 456666777776665432 01 111123333 21 1 35788889999998874 2468999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHh
Q psy14484 407 YILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 407 ~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
..+|++||+.+++.|++++.++
T Consensus 330 ~~~t~edid~l~~~L~~~~~~~ 351 (370)
T PRK05937 330 AFNTEDEVDILVSVLATYLEKY 351 (370)
T ss_pred CCCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999988653
No 108
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.96 E-value=4.3e-26 Score=220.51 Aligned_cols=335 Identities=13% Similarity=0.100 Sum_probs=223.4
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVAL 111 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al 111 (430)
++..++++..+ .+.++ .+|++.+++.+++..... ..+.......++++.+++.++.+++++++++|+++|+..++
T Consensus 26 ~~~~~i~l~~~--~~~~~-~~~~~~~a~~~~~~~~~~--~~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~ 100 (380)
T PRK06225 26 KDKEMIWMGQN--TNHLG-PHEEVREAMIRCIEEGEY--CKYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLVM 100 (380)
T ss_pred hcCCeEEccCC--CCCCC-CCHHHHHHHHHHHhcCCC--CCCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHH
Confidence 34678888766 45565 689999999998765321 11222234578888899998888889999999999999999
Q ss_pred HHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC---CCCCCCCCChhHHHHHHH
Q psy14484 112 KMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD---SRNINKGNSANEIARCAI 188 (430)
Q Consensus 112 ~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~ 188 (430)
+.++. +++.|++.+++|+.+...... .+ ..+..++... .+. .|+
T Consensus 101 ~~~~~--------~gd~vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~~~~~~------------~d~ 147 (380)
T PRK06225 101 RAFLS--------PGDNAVTPDPGYLIIDNFASR-FG------------AEVIEVPIYSEECNYK------------LTP 147 (380)
T ss_pred HHhcC--------CCCEEEEcCCCCcchHHHHHH-hC------------ceEEeeccccccCCcc------------CCH
Confidence 88754 557799999999865322111 11 1222333211 111 177
Q ss_pred HHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccccccc-CCCCCcee
Q psy14484 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEH-AEIWPDFL 267 (430)
Q Consensus 189 ~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~-~~~~~d~~ 267 (430)
+++++.+. ++++++++.. ++|++| ..++.+.+++|.++|+++|+++|+||+|.+|.. +....... .....++.
T Consensus 148 ~~l~~~~~---~~~~~v~l~~-p~NptG-~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~-~~~~~~~~~~~~~i~~~ 221 (380)
T PRK06225 148 ELVKENMD---ENTRLIYLID-PLNPLG-SSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAR-EHTLAAEYAPEHTVTSY 221 (380)
T ss_pred HHHHhhcC---CCceEEEEeC-CCCCCC-cCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhc-cCCchhhcCCCCEEEEe
Confidence 88888875 4566666555 667788 455778899999999999999999999987632 22111111 11223466
Q ss_pred eeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHH----HHHHHHHH
Q psy14484 268 CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRI----SQDMKKIT 342 (430)
Q Consensus 268 ~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~----~~~~~~l~ 342 (430)
+|||.++ .| +|+|++++++++++.+.. . ...+++.+.+++.++.++|+. ...+.+++ +++.+.+.
T Consensus 222 s~SK~~g~~G-~RiG~i~~~~~l~~~~~~------~-~~~~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~~~~~l~ 291 (380)
T PRK06225 222 SFSKIFGMAG-LRIGAVVATPDLIEVVKS------I-VINDLGTNVIAQEAAIAGLKV--KDEWIDRIRRTTFKNQKLIK 291 (380)
T ss_pred echhhcCCcc-ceeEEEecCHHHHHHHHH------H-HhcccCCCHHHHHHHHHHHhc--chHHHHHHHHHHHHHHHHHH
Confidence 8999997 46 899999999999888765 1 234567788887777776653 22334444 33444455
Q ss_pred HHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec--------CCEEEEeCCCCCCHHHH
Q psy14484 343 KALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI--------GNTVYLMPPYILNKNEI 414 (430)
Q Consensus 343 ~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~--------~~~lR~~~~~~~t~e~i 414 (430)
+.|+++.... +...+..|.++++.+. .... . ..++++.|.++||.+.++ .+++|++++ .+++++
T Consensus 292 ~~L~~~~~~~-~~~~~~~g~~~~~~~~-~~~~-~---~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~~--~~~e~l 363 (380)
T PRK06225 292 EAVDEIEGVF-LPVYPSHGNMMVIDIS-EAGI-D---PEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSFS--IPREQV 363 (380)
T ss_pred HHHHhCcCCc-cccCCCCCeEEEEEcc-cccC-C---HHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEeC--CCHHHH
Confidence 5555432211 1223456778877775 3211 1 357888899999998874 247898755 589999
Q ss_pred HHHHHHHHHHHHHh
Q psy14484 415 QHMTSAIFQTFNEV 428 (430)
Q Consensus 415 ~~~~~~l~~~l~~~ 428 (430)
++++++|+++++++
T Consensus 364 ~~~~~~l~~~~~~~ 377 (380)
T PRK06225 364 EVFCEEFPDVVETL 377 (380)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998765
No 109
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.95 E-value=4.7e-26 Score=214.51 Aligned_cols=321 Identities=13% Similarity=0.163 Sum_probs=235.4
Q ss_pred EEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC-CCCCeEEEcCCchHHHHHHHHH
Q psy14484 35 RYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ-YKLGHCFYGSDGASAVEVALKM 113 (430)
Q Consensus 35 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~v~~~~sgteA~~~al~~ 113 (430)
.++|+.+| .+++| .+|.+.+++.+.++... .|+++...++.+.+++.++ ..++.|+.++|++|.+...+++
T Consensus 23 ~~i~LssN--enP~g-p~~~~~~~~~~~~~~~~-----rYPd~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~ 94 (356)
T COG0079 23 GIIKLSSN--ENPYG-PPPKVIEAIRAALDKLN-----RYPDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRA 94 (356)
T ss_pred cceeecCC--CCCCC-CCHHHHHHHHHHHHhhc-----cCCCCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHH
Confidence 68999998 88998 56999999998887543 5677778899999999987 6778999999999999999999
Q ss_pred HHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHH
Q psy14484 114 SFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEI 193 (430)
Q Consensus 114 ~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~ 193 (430)
.+. +++.|++..|+|.-+...+...+. +.+.++... +.. |++.+.+
T Consensus 95 ~~~--------~gd~vl~~~Ptf~~Y~~~a~~~g~-------------~~~~v~~~~-~~~------------d~~~~~~ 140 (356)
T COG0079 95 FVE--------PGDTVLIPEPTFSMYEIAAQLAGA-------------EVVKVPLKE-FRL------------DLDAILA 140 (356)
T ss_pred hhc--------CCCEEEEcCCChHHHHHHHHhcCC-------------eEEEecccc-ccc------------CHHHHHH
Confidence 886 568999999999877555444332 334444433 222 7888888
Q ss_pred HHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCcee---eee
Q psy14484 194 LLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL---CLS 270 (430)
Q Consensus 194 ~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~---~~s 270 (430)
.+. +++.+|++.. +||++|.. .+.+.++++.+.|.+ +.++++||+|..|... .......-.++++ |||
T Consensus 141 ~~~---~~~~lv~i~n-PNNPTG~~-~~~~~l~~l~~~~~~-~~~vVvDEAY~eF~~~---~~~~l~~~~~nlivlRTfS 211 (356)
T COG0079 141 AIR---DKTKLVFLCN-PNNPTGTL-LPREELRALLEALPE-GGLVVIDEAYIEFSPE---SSLELLKYPPNLIVLRTFS 211 (356)
T ss_pred hhh---cCCCEEEEeC-CCCCCCCC-CCHHHHHHHHHhCCC-CcEEEEeCchhhcCCc---hhhhhccCCCCEEEEEecH
Confidence 886 3455555554 57777844 555667788887777 8999999999988651 1122222123344 799
Q ss_pred cccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHchh
Q psy14484 271 KGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKALTSLI 349 (430)
Q Consensus 271 K~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~l~ 349 (430)
|++|-.++|+|++++++++++.+.. ....|+.+.++.+++.++|+.-+ .....+.+.+.++++.+.|+.+
T Consensus 212 Ka~gLAGlRlGy~ia~~~~i~~l~~--------vr~p~~v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~- 282 (356)
T COG0079 212 KAFGLAGLRVGYAIANPELIAALNK--------VRPPFNVSSPALAAAIAALRDADYLEESVERIREERERLYAALKAL- 282 (356)
T ss_pred HhhhcchhceeeccCCHHHHHHHHH--------hcCCCCCCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhC-
Confidence 9877533899999999999999987 56788889999999998886321 1233445555566666666554
Q ss_pred cCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC------CEEEEeCCCCCCHHHHHHHHHHHHH
Q psy14484 350 THPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG------NTVYLMPPYILNKNEIQHMTSAIFQ 423 (430)
Q Consensus 350 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~------~~lR~~~~~~~t~e~i~~~~~~l~~ 423 (430)
+...-.+..++|+.+.+. . .+ +..+.+.|+++||+++.+. +++|+++. |+++.++++++|++
T Consensus 283 --~~~~v~pS~aNFvlv~~~-~-----~~-~~~l~~~L~~~giivR~~~~~~~~~~~lRitvg---t~een~~ll~AL~~ 350 (356)
T COG0079 283 --GLFGVFPSQANFVLVRVP-D-----AE-AAALAEALLKKGILVRDCSSVGLLPGYLRITVG---TPEENDRLLAALRE 350 (356)
T ss_pred --CCCeecCCCCcEEEEECC-C-----cc-HHHHHHHHHHCCEEEEeCCCCCCCCCeEEEEeC---CHHHHHHHHHHHHH
Confidence 311133555889888876 3 12 3579999999999999874 48999866 99999999999998
Q ss_pred HHHH
Q psy14484 424 TFNE 427 (430)
Q Consensus 424 ~l~~ 427 (430)
++..
T Consensus 351 ~~~~ 354 (356)
T COG0079 351 VLKG 354 (356)
T ss_pred HHhc
Confidence 8764
No 110
>PLN02483 serine palmitoyltransferase
Probab=99.95 E-value=3.4e-25 Score=218.84 Aligned_cols=347 Identities=15% Similarity=0.158 Sum_probs=226.9
Q ss_pred eeEEeecCCceeEE-EECCCCEEEecccccccccCCCC--CHHHHHHHHHHHhhcccc--c-c-CCCCCHHHHHHHHHHH
Q psy14484 15 LVIRSLKNSWKWSL-IDVSGKRYLDAISSWWVNLFGHS--NSYINKALKNQLNKLEHV--M-L-SNLTHKPVIKLSEKLS 87 (430)
Q Consensus 15 ~~~~~~~~~~~~~~-~d~~g~~~lD~~~~~~~~~lG~~--~p~v~~a~~~~~~~~~~~--~-~-~~~~~~~~~~l~~~l~ 87 (430)
.++.+.....++++ ...+++++++|.|+ ++||.+ ++...+++.+++.+.+.. . + ..+.++...++++.++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~n~~s~---~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA 156 (489)
T PLN02483 80 DVVERVSNDNNKTLKRTTKTRRCLNLGSY---NYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVA 156 (489)
T ss_pred EEEEeecCCCCceEEecCCCceEEEeecC---CccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHH
Confidence 44454443322233 34567899999985 788885 567788888888776432 1 1 1345788999999999
Q ss_pred hhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeC
Q psy14484 88 SLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIIT 167 (430)
Q Consensus 88 ~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (430)
+.++ . ++.+++++|+.++..++.++.. +++.|++.+++|+..... ....+ ..+..+
T Consensus 157 ~~~g-~-~~ai~~~~G~~an~~~i~al~~--------~Gd~Vi~d~~~h~s~~~~-~~~~G------------a~v~~~- 212 (489)
T PLN02483 157 RFVG-K-PAAIVFGMGYATNSTIIPALIG--------KGGLIISDSLNHNSIVNG-ARGSG------------ATIRVF- 212 (489)
T ss_pred HHhC-C-CcEEEECCHHHHHHHHHHHhCC--------CCCEEEEcchhhHHHHHH-HHHcC------------CeEEEE-
Confidence 9996 4 4445556688888877777654 566777766666554322 22222 122233
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHhC----------CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCC
Q psy14484 168 TPDSRNINKGNSANEIARCAIFDLEILLKKN----------HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNI 237 (430)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~----------~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi 237 (430)
++ +|++++++.+++. +....+|++|+ +.++.|.+.+ +++|.++|++||+
T Consensus 213 -~~---------------~d~~~le~~l~~~i~~~~p~t~~p~~k~livve~-v~s~~G~~~~----l~~I~~la~~~~~ 271 (489)
T PLN02483 213 -QH---------------NTPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEG-IYSMEGELCK----LPEIVAVCKKYKA 271 (489)
T ss_pred -eC---------------CCHHHHHHHHHhhhhccccccccCCceEEEEECC-CCCCCCcccC----HHHHHHHHHHcCC
Confidence 32 1455666555431 11245888999 9999998887 9999999999999
Q ss_pred EEEEecccc-C-CCCcccccccccCCCC---Ccee--eeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCC--
Q psy14484 238 HLIADEIAV-G-CGRTGKFFACEHAEIW---PDFL--CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSY-- 308 (430)
Q Consensus 238 ~li~DEv~~-g-~g~~g~~~~~~~~~~~---~d~~--~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~-- 308 (430)
++|+||+|+ | +|++|.. ..+..++. .|++ +|||+++. ..|++++++++++.+.. ...+.++
T Consensus 272 ~livDEa~s~g~~G~~G~g-~~~~~~v~~~~~dI~~~SfSKs~g~---~GG~i~~~~~li~~l~~------~~~~~~~~~ 341 (489)
T PLN02483 272 YVYLDEAHSIGAVGKTGRG-VCELLGVDPADVDIMMGTFTKSFGS---CGGYIAGSKELIQYLKR------TCPAHLYAT 341 (489)
T ss_pred EEEEECcCccCccCCCCCc-hHHhcCCCcccCcEEEEecchhccc---CceEEEcCHHHHHHHHH------hCccccccC
Confidence 999999997 1 2334432 23444443 3666 89999974 23789999999988875 1122222
Q ss_pred CCCHHHHHHHHHHHHHHhhc-------CHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHH
Q psy14484 309 SGNPLACCAALATLEIFNKD-------NILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSK 381 (430)
Q Consensus 309 ~~~~~~~~aa~~~l~~~~~~-------~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~ 381 (430)
..++..+.++.++|+.+..+ +..++++++.+++++.|+++ ...... ...+.+..+.+. .. . ...
T Consensus 342 ~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~-G~~v~~--~~~sp~~~l~l~-~~----~-~~~ 412 (489)
T PLN02483 342 SMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKM-GFEVLG--DNDSPVMPIMLY-NP----A-KIP 412 (489)
T ss_pred CcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHC-CCcccC--CCCCCEEEEEEC-CH----H-HHH
Confidence 23556666677778765422 24567788888889988876 222111 112234444433 21 1 135
Q ss_pred HHHHHHHHCCcEEeec--------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 382 KFFVAALKNELLLRPI--------GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 382 ~~~~~l~~~Gv~~~~~--------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.+++.|+++||.+.+. ...+||+++..+|+|+|++++++|+++++.+
T Consensus 413 ~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~ 467 (489)
T PLN02483 413 AFSRECLKQNVAVVVVGFPATPLLLARARICISASHSREDLIKALEVISEVGDLV 467 (489)
T ss_pred HHHHHHHHCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 7899999999998842 1578999999999999999999999987643
No 111
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=5.5e-26 Score=218.50 Aligned_cols=327 Identities=11% Similarity=0.113 Sum_probs=216.7
Q ss_pred CCC-EEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHH
Q psy14484 32 SGK-RYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVA 110 (430)
Q Consensus 32 ~g~-~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~a 110 (430)
.|+ .++++..| .+.+| .+|++.+++.+.+.... .|+.....++++.+++.++.++++|++++|+++++..+
T Consensus 29 ~g~~~~~~l~~~--~~~~~-~~~~~~~a~~~~~~~~~-----~Y~~~~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~ 100 (369)
T PRK08153 29 RGRPFRARIGAN--ESGFG-PSPSVIAAMREAAAEIW-----KYGDPENHDLRHALAAHHGVAPENIMVGEGIDGLLGLI 100 (369)
T ss_pred cCCcceeEecCC--CCCCC-CCHHHHHHHHHHHHHhh-----cCCCCccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHH
Confidence 344 45788776 45565 57889999988765422 12222356788888888877888999999999999999
Q ss_pred HHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHH
Q psy14484 111 LKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFD 190 (430)
Q Consensus 111 l~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 190 (430)
++++.. +++.|++.+|+|.++.......+ .....+++..+ . .|+++
T Consensus 101 ~~~~~~--------~gd~vlv~~p~y~~~~~~~~~~g-------------~~~~~vp~~~~--~-----------~~~~~ 146 (369)
T PRK08153 101 VRLYVE--------PGDPVVTSLGAYPTFNYHVAGFG-------------GRLVTVPYRDD--R-----------EDLDA 146 (369)
T ss_pred HHHhcC--------CCCEEEECCCcchHHHHHHHHcC-------------CeEEEeeCCCC--C-----------CCHHH
Confidence 887765 67889999999987643322211 12233333211 1 16777
Q ss_pred HHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCc---ee
Q psy14484 191 LEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD---FL 267 (430)
Q Consensus 191 le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d---~~ 267 (430)
+++.+. .++++++++.. ++|++|. ..+.+.++++.+.|++ ++++|+||+|..+...+....+. ...++ +-
T Consensus 147 l~~~~~--~~~~~~i~l~~-P~NPtG~-~~~~~~l~~l~~~~~~-~~~lI~DE~y~~~~~~~~~~~~~--~~~~~~i~~~ 219 (369)
T PRK08153 147 LLDAAR--RENAPLVYLAN-PDNPMGS-WHPAADIVAFIEALPE-TTLLVLDEAYCETAPAGAAPPID--TDDPNVIRMR 219 (369)
T ss_pred HHHHhc--ccCCcEEEEeC-CCCCCCC-CCCHHHHHHHHHhCCC-CcEEEEeCchhhhcCcccchhhh--hcCCCEEEEe
Confidence 766654 24556666655 6777784 5566778888888774 99999999999886544321111 12344 33
Q ss_pred eeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q psy14484 268 CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALT 346 (430)
Q Consensus 268 ~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~ 346 (430)
+|||.++ .| +|+|++++++++++.+.. ...+++.+++++.++.++|+ ++.+.+++++..+..++.+.
T Consensus 220 SfSK~~g~~G-lRiG~~v~~~~~~~~l~~--------~~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~~~ 287 (369)
T PRK08153 220 TFSKAYGLAG-ARVGYAIGAPGTIKAFDK--------VRNHFGMNRIAQAAALAALK---DQAYLAEVVGKIAAARDRIA 287 (369)
T ss_pred cchHhccCcc-hheeeeecCHHHHHHHHH--------hhcCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHH
Confidence 7999998 57 899999999999888765 22456778888888888875 33444444444444444433
Q ss_pred ch-hcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEe-ec----CCEEEEeCCCCCCHHHHHHHHHH
Q psy14484 347 SL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLR-PI----GNTVYLMPPYILNKNEIQHMTSA 420 (430)
Q Consensus 347 ~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~-~~----~~~lR~~~~~~~t~e~i~~~~~~ 420 (430)
+. ...+. ...+..|.++++.+. .+ ..++.++.+.|.++||.+. |+ .+++|+++. ++++++.++++
T Consensus 288 ~~L~~~g~-~~~p~~~~f~~~~~~-~~----~~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis~~---~~~~~~~~~~a 358 (369)
T PRK08153 288 AIARANGL-TPLPSATNFVAIDCG-RD----GAFARAVLDGLIARDIFVRMPGVAPLDRCIRVSCG---PDEELDLFAEA 358 (369)
T ss_pred HHHHHCCC-ccCCCcCcEEEEECC-CC----cccHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC---CHHHHHHHHHH
Confidence 22 22222 223455666666553 21 1225789999999999995 42 258899865 89999999999
Q ss_pred HHHHHHHh
Q psy14484 421 IFQTFNEV 428 (430)
Q Consensus 421 l~~~l~~~ 428 (430)
|++++..+
T Consensus 359 l~~~~~~~ 366 (369)
T PRK08153 359 LPEALEAA 366 (369)
T ss_pred HHHHHHHh
Confidence 99988643
No 112
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=4.3e-26 Score=218.97 Aligned_cols=316 Identities=12% Similarity=0.120 Sum_probs=213.5
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKM 113 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~ 113 (430)
.+++||.+| .+++| .+|.+.+++.+.+.... .++.....++++.+++.++.++++|++|+|+++++..+++.
T Consensus 29 ~~~i~l~~n--~~~~~-~~~~v~~a~~~~~~~~~-----~~p~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~ 100 (359)
T PRK03158 29 EKIVKLASN--ENPYG-PSPKVKEAIAAHLDELA-----LYPDGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRA 100 (359)
T ss_pred CceEEecCC--CCCCC-CCHHHHHHHHHHHHHhh-----cCCCCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHH
Confidence 378999887 45677 58899999998876533 23334456777888888877788999999999999988887
Q ss_pred HHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHH
Q psy14484 114 SFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEI 193 (430)
Q Consensus 114 ~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~ 193 (430)
+.. +++.|++.+|+|+++....... ..++..++.. .... |++++++
T Consensus 101 ~~~--------~gd~v~~~~p~y~~~~~~~~~~-------------g~~~~~~~~~-~~~~------------d~~~l~~ 146 (359)
T PRK03158 101 LLN--------PGTNTVMAEPTFSQYRHNAIIE-------------GAEVREVPLK-DGGH------------DLEAMLK 146 (359)
T ss_pred HhC--------CCCEEEEcCCCHHHHHHHHHHc-------------CCeEEEEecC-CCCc------------CHHHHHH
Confidence 754 5688999999998764332221 1222334332 1111 7788887
Q ss_pred HHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc-cccc---ccCCCCCceeee
Q psy14484 194 LLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-FFAC---EHAEIWPDFLCL 269 (430)
Q Consensus 194 ~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~-~~~~---~~~~~~~d~~~~ 269 (430)
.++ ++++++++.. ++|++|...+ .+.+.++.+.|+ +|+++|+||+|..+...+. .... +..+...-+.+|
T Consensus 147 ~~~---~~~~~v~i~~-p~NPtG~~~~-~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~ 220 (359)
T PRK03158 147 AID---EQTKIVWICN-PNNPTGTYVN-HEELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTF 220 (359)
T ss_pred hcC---CCCCEEEEeC-CCCCCCCCCC-HHHHHHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEec
Confidence 774 4566777666 7889996655 444555555553 6999999999987643321 1111 111111123389
Q ss_pred ecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHH----HHHHHHHHHH
Q psy14484 270 SKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRI----SQDMKKITKA 344 (430)
Q Consensus 270 sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~----~~~~~~l~~~ 344 (430)
||.++ .| +|+|++++++++++.+.. ...+++.+.+++.++.++|+ +.++.+++ ++..+++.+.
T Consensus 221 SK~~g~~G-lRiG~~v~~~~~~~~~~~--------~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~ 288 (359)
T PRK03158 221 SKAYGLAA-LRVGYGIASEELIEKLNI--------ARPPFNTTRIAQYAAIAALE---DQAFLKECVEKNAEGLEQYYAF 288 (359)
T ss_pred hHhhcCcc-hhhehhcCCHHHHHHHHH--------hcCCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHH
Confidence 99998 46 899999999999888875 22356778888888888875 22333333 3344444444
Q ss_pred HHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-----CCEEEEeCCCCCCHHHHHHHHH
Q psy14484 345 LTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----GNTVYLMPPYILNKNEIQHMTS 419 (430)
Q Consensus 345 l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-----~~~lR~~~~~~~t~e~i~~~~~ 419 (430)
|++. + +...++.|.++++.+. .+ ..++++.|.++||.+.|+ ++++||+++ ++++++.+++
T Consensus 289 l~~~---~-~~~~~~~g~~i~~~~~-~~-------~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~---~~~~~~~l~~ 353 (359)
T PRK03158 289 CKEY---G-LFYYPSQTNFIFVDTG-RD-------ANELFEALLKKGYIVRSGAALGFPTGVRITIG---LKEQNDKIIE 353 (359)
T ss_pred HHHC---C-CeeCCCcCcEEEEECC-CC-------HHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC---CHHHHHHHHH
Confidence 4432 2 2334556777776554 21 357889999999999985 368999865 8999999999
Q ss_pred HHHHH
Q psy14484 420 AIFQT 424 (430)
Q Consensus 420 ~l~~~ 424 (430)
+|+++
T Consensus 354 al~~~ 358 (359)
T PRK03158 354 LLKEL 358 (359)
T ss_pred HHHHh
Confidence 99875
No 113
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=1.2e-25 Score=216.48 Aligned_cols=325 Identities=14% Similarity=0.157 Sum_probs=217.6
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVAL 111 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al 111 (430)
++++++||.++ .+++| .+|.+++++.+.+.... .++.....++++.+++.++.++++|++++|+++++..++
T Consensus 30 ~~~~~i~l~~~--~~~~~-~~~~~~~a~~~~~~~~~-----~y~~~~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~ 101 (367)
T PRK02731 30 GIADIIKLASN--ENPLG-PSPKAIEAIRAAADELH-----RYPDGSGFELKAALAEKFGVDPERIILGNGSDEILELLA 101 (367)
T ss_pred CCCceEEecCC--CCCCC-CCHHHHHHHHHHHHhhc-----CCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHH
Confidence 56789999987 56677 57889999998876432 233333457888888888777889999999999998887
Q ss_pred HHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHH
Q psy14484 112 KMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDL 191 (430)
Q Consensus 112 ~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 191 (430)
..+.. +++.|++.+++|..+.......+ .....++.+ .+.. |++++
T Consensus 102 ~~l~~--------~gd~vl~~~p~y~~~~~~~~~~g-------------~~~~~~~~~-~~~~------------~~~~l 147 (367)
T PRK02731 102 RAYLG--------PGDEVIYSEHGFAVYPIAAQAVG-------------AKPVEVPAK-DYGH------------DLDAM 147 (367)
T ss_pred HHhcC--------CCCEEEEecCCHHHHHHHHHHcC-------------CeEEEeccc-CCCC------------CHHHH
Confidence 76653 56789999999876543222211 122233321 1111 78889
Q ss_pred HHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc-ccccccCCCCCcee---
Q psy14484 192 EILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-FFACEHAEIWPDFL--- 267 (430)
Q Consensus 192 e~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~-~~~~~~~~~~~d~~--- 267 (430)
++.++ +++++|+++. ++|++|...+ .+.++++.+.|+ +|+++|+||+|..+.+.+. .......+..++++
T Consensus 148 ~~~~~---~~~~~v~l~~-p~nptG~~~~-~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~ 221 (367)
T PRK02731 148 LAAVT---PRTRLVFIAN-PNNPTGTYLP-AEEVERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTR 221 (367)
T ss_pred HHHhC---CCCcEEEEeC-CCCCCCcCCC-HHHHHHHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEe
Confidence 88885 4567777777 8889995554 444555555554 5999999999986654332 11222222234444
Q ss_pred eeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHH
Q psy14484 268 CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKAL 345 (430)
Q Consensus 268 ~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-~~~~~~~~~~~~~~l~~~l 345 (430)
+|||.++ .| +|+|++++++++.+.+.. ...++..+.+++.++.+.++..+ .+...+.++++.+++.+.|
T Consensus 222 S~SK~~g~~G-~RiG~l~~~~~~~~~l~~--------~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L 292 (367)
T PRK02731 222 TFSKAYGLAG-LRVGYGIAPPEIIDALNR--------VRQPFNVNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFL 292 (367)
T ss_pred eehHhhcCcc-cceeeeeCCHHHHHHHHH--------ccCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 7999986 46 799999999999888765 22345667777777777765211 1223344455555555555
Q ss_pred HchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-----CCEEEEeCCCCCCHHHHHHHHHH
Q psy14484 346 TSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----GNTVYLMPPYILNKNEIQHMTSA 420 (430)
Q Consensus 346 ~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-----~~~lR~~~~~~~t~e~i~~~~~~ 420 (430)
++. + +...++.|.++++.+. .... +.++++.|.++||.+.++ .+++|++++ ++++++.++++
T Consensus 293 ~~~---g-~~~~~~~g~~~~i~~~-~~~~-----~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~e~~~l~~a 359 (367)
T PRK02731 293 AEL---G-LEYIPSVGNFILVDFD-DGKD-----AAEAYQALLKRGVIVRPVAGYGLPNALRITIG---TEEENRRFLAA 359 (367)
T ss_pred HHC---C-CccCCCCceEEEEECC-CCCC-----HHHHHHHHHHCCEEEEeCCCCCCCCeEEEecC---CHHHHHHHHHH
Confidence 544 2 2222456888888774 3211 367899999999999886 268999865 78999999999
Q ss_pred HHHHHH
Q psy14484 421 IFQTFN 426 (430)
Q Consensus 421 l~~~l~ 426 (430)
|+++++
T Consensus 360 L~~~~~ 365 (367)
T PRK02731 360 LKEFLA 365 (367)
T ss_pred HHHHHh
Confidence 998875
No 114
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.95 E-value=7.1e-25 Score=209.93 Aligned_cols=326 Identities=19% Similarity=0.168 Sum_probs=217.9
Q ss_pred CEEEecccccccccCCCC-CHHHHHHHHHHHhhccccc----cCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHH
Q psy14484 34 KRYLDAISSWWVNLFGHS-NSYINKALKNQLNKLEHVM----LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVE 108 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~-~p~v~~a~~~~~~~~~~~~----~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~ 108 (430)
+.||.|+++ .+||+. ||+|.++++++++++.... ......+...++++.+++.++. +.++++++|++++.
T Consensus 1 ~~~~~~~~~---~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~~~iv~~sg~~a~~ 75 (349)
T cd06454 1 KKVLNFCSN---DYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGK--EAALVFSSGYAAND 75 (349)
T ss_pred CCceecccC---CccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCC--CCEEEeccHHHHHH
Confidence 468899885 789996 9999999999998754321 1124567888999999999963 45677788899999
Q ss_pred HHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHH
Q psy14484 109 VALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAI 188 (430)
Q Consensus 109 ~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 188 (430)
.+++.++. +++.|++.++.|.. ........+ .....++.. |.
T Consensus 76 ~~~~~~~~--------~gd~Vl~~~~~~~~-~~~~~~~~g------------~~~~~~~~~-----------------~~ 117 (349)
T cd06454 76 GVLSTLAG--------KGDLIISDSLNHAS-IIDGIRLSG------------AKKRIFKHN-----------------DM 117 (349)
T ss_pred HHHHHhcC--------CCCEEEEehhhhHH-HHHHHHHcC------------CceEEecCC-----------------CH
Confidence 88876653 56778876665433 222221111 122222211 56
Q ss_pred HHHHHHHHhC--CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcc---ccc-ccccCCC
Q psy14484 189 FDLEILLKKN--HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTG---KFF-ACEHAEI 262 (430)
Q Consensus 189 ~~le~~l~~~--~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g---~~~-~~~~~~~ 262 (430)
+.+++.+++. +.+++++++++ +++++|...+ +++|.++|+++|+++|+||+|. ++..+ ... .......
T Consensus 118 ~~le~~i~~~~~~~~~~~v~~~~-~~~~tG~~~~----~~~i~~~~~~~~~~livD~a~~-~g~~~~~~~~~~~~~~~~~ 191 (349)
T cd06454 118 EDLEKLLREARRPYGKKLIVTEG-VYSMDGDIAP----LPELVDLAKKYGAILFVDEAHS-VGVYGPHGRGVEEFGGLTD 191 (349)
T ss_pred HHHHHHHHHhhccCCCeEEEEec-cccCCCCccC----HHHHHHHHHHcCCEEEEEcccc-ccccCCCCCChhhhccccc
Confidence 7788888754 25678888998 9999997776 9999999999999999999986 33222 111 0111122
Q ss_pred CCcee--eeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh-cCHHHHHHHHHH
Q psy14484 263 WPDFL--CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK-DNILQRISQDMK 339 (430)
Q Consensus 263 ~~d~~--~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~-~~~~~~~~~~~~ 339 (430)
..|++ +++|.++. +.|+++.++++++.+... ... ...+.+.++..++++.++++.+.+ ++..+++.++.+
T Consensus 192 ~~~i~~~s~sK~~~~---~gG~i~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 264 (349)
T cd06454 192 DVDIIMGTLGKAFGA---VGGYIAGSKELIDYLRSY--ARG--FIFSTSLPPAVAAAALAALEVLQGGPERRERLQENVR 264 (349)
T ss_pred cCcEEEeechhhhcc---cCCEEECCHHHHHHHHHh--chh--hhccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 35655 68898874 447788888887776541 111 112234567777788888887654 456677888888
Q ss_pred HHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec--------CCEEEEeCCCCCCH
Q psy14484 340 KITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI--------GNTVYLMPPYILNK 411 (430)
Q Consensus 340 ~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~--------~~~lR~~~~~~~t~ 411 (430)
++.+.|+++ ..+... .+.+.+..+... ++ . ...++.+.|.++||.+.+. ++.+|++++..+++
T Consensus 265 ~l~~~l~~~-g~~~~~--~~~~~~~~~~~~-~~---~--~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~ 335 (349)
T cd06454 265 YLRRGLKEL-GFPVGG--SPSHIIPPLIGD-DP---A--KAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLSAAHTK 335 (349)
T ss_pred HHHHHHHhc-CCcccC--CCCCcEEEEeCC-Ch---H--HHHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEeCCCCH
Confidence 888888765 222211 112222222222 11 1 1467999999999998752 36899999999999
Q ss_pred HHHHHHHHHHHHH
Q psy14484 412 NEIQHMTSAIFQT 424 (430)
Q Consensus 412 e~i~~~~~~l~~~ 424 (430)
+++++++++|+++
T Consensus 336 ~~i~~~~~~l~~~ 348 (349)
T cd06454 336 EDIDRLLEALKEV 348 (349)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999764
No 115
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.3e-24 Score=210.57 Aligned_cols=335 Identities=13% Similarity=0.062 Sum_probs=221.8
Q ss_pred EEEecccccccccCCCCCHHHHHHHHHHHhhccc-cccCCCCCHHHHHHHHHHHhhcC--CCCCeEEEcCCchHHHHHHH
Q psy14484 35 RYLDAISSWWVNLFGHSNSYINKALKNQLNKLEH-VMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAVEVAL 111 (430)
Q Consensus 35 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgteA~~~al 111 (430)
.+++|..|. ..++ .++.+.+++.+.+..... +....+..++++.+++.+.+.++ ..+++|++++|+++|+..++
T Consensus 25 ~~i~l~~g~--~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~ 101 (382)
T PRK06108 25 GVLPLWFGE--SDLP-TPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAA 101 (382)
T ss_pred CeEEecCCC--CCCC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHH
Confidence 578887763 3344 368899999988765321 22223445677788888877665 67789999999999999999
Q ss_pred HHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCC-CCCCCCChhHHHHHHHHH
Q psy14484 112 KMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSR-NINKGNSANEIARCAIFD 190 (430)
Q Consensus 112 ~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~ 190 (430)
+.++. +++.|++.+|+|..+....... ......++..... .. ..|+++
T Consensus 102 ~~l~~--------~gd~vl~~~p~y~~~~~~~~~~-------------g~~~~~v~~~~~~~~~----------~~d~~~ 150 (382)
T PRK06108 102 QALVG--------PGDEVVAVTPLWPNLVAAPKIL-------------GARVVCVPLDFGGGGW----------TLDLDR 150 (382)
T ss_pred HHhcC--------CCCEEEEeCCCccchHHHHHHC-------------CCEEEEeeCCCCCCCc----------cCCHHH
Confidence 87764 5678999999997664332221 1222333332110 00 017888
Q ss_pred HHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCc-cccc-c-cccCCCCCc--
Q psy14484 191 LEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRT-GKFF-A-CEHAEIWPD-- 265 (430)
Q Consensus 191 le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~-g~~~-~-~~~~~~~~d-- 265 (430)
+++.++ +++++++++. ++|++|. ..+.+.+++|.++|+++|+++|+||+|.++... +... . .......+.
T Consensus 151 l~~~~~---~~~~~i~l~~-p~NPtG~-~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i 225 (382)
T PRK06108 151 LLAAIT---PRTRALFINS-PNNPTGW-TASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRII 225 (382)
T ss_pred HHHhcC---ccceEEEEEC-CCCCCCc-ccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEE
Confidence 888875 3567777777 8888884 467888999999999999999999999987543 2111 1 111111122
Q ss_pred -eeeeecccCC-CccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--hcCHHHHHHHHHHHH
Q psy14484 266 -FLCLSKGITG-GYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQDMKKI 341 (430)
Q Consensus 266 -~~~~sK~l~g-G~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~~~~l 341 (430)
+.+|||.++. | +|+|++++++++++.+.. .....+.+.+++.+.++.++|+... -++..++++++.+++
T Consensus 226 ~~~S~SK~~g~~G-~RiG~~~~~~~~~~~~~~------~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l 298 (382)
T PRK06108 226 FVNSFSKNWAMTG-WRLGWLVAPPALGQVLEK------LIEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHL 298 (382)
T ss_pred EEeechhhccCcc-cceeeeeCCHHHHHHHHH------HHHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 3379999864 6 899999999998887765 2223345567777777777775311 123445566666666
Q ss_pred HHHHHchhcCCCeeeEeecce-EEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec-------CCEEEEeCCCCCCHH
Q psy14484 342 TKALTSLITHPKIINFRQKGM-IWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------GNTVYLMPPYILNKN 412 (430)
Q Consensus 342 ~~~l~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~-------~~~lR~~~~~~~t~e 412 (430)
.+.|+++ +.+....++|. ++++.+. ... . ...+++.|+ ++||.+.|+ .+++|++++. +++
T Consensus 299 ~~~L~~~---~~~~~~~p~~g~~~~~~l~-~~~--~---~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~--~~~ 367 (382)
T PRK06108 299 VDALRAL---PGVEVAKPDGAMYAFFRIP-GVT--D---SLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR--DPA 367 (382)
T ss_pred HHHHHhC---CCCcccCCCeeEEEEEeCC-CCC--C---HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC--CHH
Confidence 6666554 33333334444 4455554 321 1 356888875 579999774 3689998886 899
Q ss_pred HHHHHHHHHHHHHH
Q psy14484 413 EIQHMTSAIFQTFN 426 (430)
Q Consensus 413 ~i~~~~~~l~~~l~ 426 (430)
++++++++|++++.
T Consensus 368 ~l~~~l~~l~~~l~ 381 (382)
T PRK06108 368 RLDEAVERLRRFLA 381 (382)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998774
No 116
>PLN00175 aminotransferase family protein; Provisional
Probab=99.94 E-value=2.1e-24 Score=210.14 Aligned_cols=335 Identities=11% Similarity=0.098 Sum_probs=222.5
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhc-cccccCCCCCHHHHHHHHHHHhhcC--CCCC-eEEEcCCchHHHHH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKL-EHVMLSNLTHKPVIKLSEKLSSLTQ--YKLG-HCFYGSDGASAVEV 109 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~-~v~~~~sgteA~~~ 109 (430)
..++||..|.. .+. .+|.+.+++.+.+.+. ..+....+..++++.+++.+.+..+ .+++ +|++|+|+++|+..
T Consensus 54 ~~~i~l~~G~P--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~ 130 (413)
T PLN00175 54 HGAINLGQGFP--NFD-GPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAA 130 (413)
T ss_pred CCeEecCCCCC--CCC-CCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHH
Confidence 45788887743 232 3678889998887652 1222223344666777777776554 3555 69999999999999
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC-CCCCCCCCChhHHHHHHH
Q psy14484 110 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD-SRNINKGNSANEIARCAI 188 (430)
Q Consensus 110 al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~ 188 (430)
++..... +++.|++.+|+|..+.......+ .....++... .+.. |+
T Consensus 131 ~~~~l~~--------~gd~Vlv~~P~y~~~~~~~~~~g-------------~~~~~v~~~~~~~~~------------~~ 177 (413)
T PLN00175 131 TILGLIN--------PGDEVILFAPFYDSYEATLSMAG-------------AKIKTVTLRPPDFAV------------PE 177 (413)
T ss_pred HHHHhCC--------CCCEEEEeCCCchhHHHHHHHcC-------------CEEEEEECCcccCCC------------CH
Confidence 9887654 67889999999987643333222 2223343321 1111 78
Q ss_pred HHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccc-cccCCCCCc--
Q psy14484 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA-CEHAEIWPD-- 265 (430)
Q Consensus 189 ~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~-~~~~~~~~d-- 265 (430)
++|++.+. .+++++++.. ++|++| ...+.+.+++|.++|++||+++|+||+|..+...+.... .+..+....
T Consensus 178 ~~l~~~~~---~~~k~i~i~~-p~NPtG-~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi 252 (413)
T PLN00175 178 DELKAAFT---SKTRAILINT-PHNPTG-KMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTV 252 (413)
T ss_pred HHHHHhcC---cCceEEEecC-CCCCCC-cCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEE
Confidence 88988885 4577888877 889999 566788999999999999999999999997754432211 122222222
Q ss_pred -eeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--hcCHHHHHHHHHHHH
Q psy14484 266 -FLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQDMKKI 341 (430)
Q Consensus 266 -~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~~~~l 341 (430)
+-+|||.++ .| +|+|++++++++++.+.. .....+++.+.+.+.++.++|+..+ -++..+.++++.+.+
T Consensus 253 ~i~SfSK~~~~~G-~RiG~~v~~~~l~~~l~~------~~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l 325 (413)
T PLN00175 253 TMNSLGKTFSLTG-WKIGWAIAPPHLTWGVRQ------AHSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDIL 325 (413)
T ss_pred EEecchhhccCcc-hheeeeEeCHHHHHHHHH------HHhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 337999998 57 899999999999887765 2233456778888888877775211 123345556666666
Q ss_pred HHHHHchhcCCCeeeEeecceE-EEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec----------CCEEEEeCCCCC
Q psy14484 342 TKALTSLITHPKIINFRQKGMI-WAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI----------GNTVYLMPPYIL 409 (430)
Q Consensus 342 ~~~l~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~----------~~~lR~~~~~~~ 409 (430)
.+.|++. + +....+.|.+ +++.+. ...... ..++++.|+ ++||.+.|+ .+++|++++ .
T Consensus 326 ~~~L~~~---g-~~~~~p~g~~f~~~~~~-~~~~~~---~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~--~ 395 (413)
T PLN00175 326 VEGLKEV---G-FKVYPSSGTYFVMVDHT-PFGFEN---DIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFC--K 395 (413)
T ss_pred HHHHHHC---C-CeecCCCeeEEEEEecc-ccCCCC---HHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEc--C
Confidence 6666653 2 2233455555 444443 211111 257888876 569998874 147898766 5
Q ss_pred CHHHHHHHHHHHHHHHH
Q psy14484 410 NKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 410 t~e~i~~~~~~l~~~l~ 426 (430)
+++++++++++|++.++
T Consensus 396 ~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 396 DEETLRAAVERMKTKLK 412 (413)
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 89999999999998875
No 117
>PRK07682 hypothetical protein; Validated
Probab=99.94 E-value=8.1e-25 Score=211.55 Aligned_cols=335 Identities=12% Similarity=0.100 Sum_probs=219.9
Q ss_pred EEEecccccccccCCCCCHHHHHHHHHHHhhc-cccccCCCCCHHHHHHHHHHHhhcC--CCCC-eEEEcCCchHHHHHH
Q psy14484 35 RYLDAISSWWVNLFGHSNSYINKALKNQLNKL-EHVMLSNLTHKPVIKLSEKLSSLTQ--YKLG-HCFYGSDGASAVEVA 110 (430)
Q Consensus 35 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~-~v~~~~sgteA~~~a 110 (430)
..++|..+ ...++ .++.+.+++.+.+... ..+....+..++++++++.+.+.++ ..++ +|++|+|+++|+..+
T Consensus 21 ~~i~l~~~--~~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~ 97 (378)
T PRK07682 21 GVISLGVG--EPDFV-TPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVA 97 (378)
T ss_pred CeEEeCCC--CCCCC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHH
Confidence 46777766 33454 4567888888876542 1122223444666777777776543 3454 799999999999999
Q ss_pred HHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC--CCCCCCCCCChhHHHHHHH
Q psy14484 111 LKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP--DSRNINKGNSANEIARCAI 188 (430)
Q Consensus 111 l~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~ 188 (430)
++.++. +++.|++.+++|+.+.......+. ....++.+ +.+.. |+
T Consensus 98 ~~~l~~--------~gd~vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~------------d~ 144 (378)
T PRK07682 98 MRAIIN--------PGDEVLIVEPSFVSYAPLVTLAGG-------------VPVPVATTLENEFKV------------QP 144 (378)
T ss_pred HHHhCC--------CCCEEEEeCCCchhhHHHHHHcCC-------------EEEEeecCCccCCCC------------CH
Confidence 987764 678999999999876443333222 11222221 11111 78
Q ss_pred HHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccccc-ccCCCCCc--
Q psy14484 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFAC-EHAEIWPD-- 265 (430)
Q Consensus 189 ~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~-~~~~~~~d-- 265 (430)
+++++++. ++++++++.. ++|++| ...+.+.+++|.++|++|++++|+||+|..+.+.+....+ ...+..+.
T Consensus 145 ~~l~~~~~---~~~~~v~~~~-p~NPtG-~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i 219 (378)
T PRK07682 145 AQIEAAIT---AKTKAILLCS-PNNPTG-AVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTI 219 (378)
T ss_pred HHHHhhcC---cccEEEEEEC-CCCCcC-cCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEE
Confidence 89988875 3567776666 778888 4667888999999999999999999999988655432111 11122222
Q ss_pred -eeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--hcCHHHHHHHHHHHH
Q psy14484 266 -FLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQDMKKI 341 (430)
Q Consensus 266 -~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~~~~l 341 (430)
+.+|||.++ .| +|+|++++++++++.+.. .....+++.+.+++.++.++|+..+ .....+.++++.+.+
T Consensus 220 ~~~S~SK~~~~~G-lR~G~~~~~~~~i~~l~~------~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 292 (378)
T PRK07682 220 LISGFSKGFAMTG-WRLGFIAAPVYFSEAMLK------IHQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFF 292 (378)
T ss_pred EEecCcccccChh-hhhhhhhcCHHHHHHHHH------HHHhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 447999997 57 899999999999888765 1223345667788877777775211 122344556666667
Q ss_pred HHHHHchhcCCCeeeEeecceEEEE-EEeecCCccchhHHHHHHHHHH-HCCcEEeec-------CCEEEEeCCCCCCHH
Q psy14484 342 TKALTSLITHPKIINFRQKGMIWAF-DVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------GNTVYLMPPYILNKN 412 (430)
Q Consensus 342 ~~~l~~l~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~-------~~~lR~~~~~~~t~e 412 (430)
.+.|+++ . +....+.|.++.+ .+. .... . +..+++.++ ++||.+.|+ .+++|++++ .+++
T Consensus 293 ~~~L~~~---~-~~~~~p~g~~~~~~~~~-~~~~-~---~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~--~~~~ 361 (378)
T PRK07682 293 VTSFNEI---G-LTCHVPGGAFYAFPSIS-STGL-S---SEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYA--TSLE 361 (378)
T ss_pred HHHHHHC---C-CccCCCCeeEEEEEecc-CCCC-C---HHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeC--CCHH
Confidence 7777654 2 2223455555544 342 2111 1 356888875 679999874 368999766 4789
Q ss_pred HHHHHHHHHHHHHHHh
Q psy14484 413 EIQHMTSAIFQTFNEV 428 (430)
Q Consensus 413 ~i~~~~~~l~~~l~~~ 428 (430)
++++++++|++++.++
T Consensus 362 ~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 362 QLQEAMKRMKRFVENK 377 (378)
T ss_pred HHHHHHHHHHHHHhhc
Confidence 9999999999988753
No 118
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.94 E-value=5.3e-25 Score=211.69 Aligned_cols=320 Identities=14% Similarity=0.130 Sum_probs=211.4
Q ss_pred CCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEE-cCCchHHHHH
Q psy14484 31 VSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFY-GSDGASAVEV 109 (430)
Q Consensus 31 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~-~~sgteA~~~ 109 (430)
.++++++||.+| .+++| .+|++++++.+.+.... .++.....++++.+++.++.+++++++ ++|+++++..
T Consensus 31 ~~~~~~i~l~~~--~~~~~-~~~~~~~~~~~~~~~~~-----~y~~~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~ 102 (361)
T PRK00950 31 IDPESIIKLGSN--ENPLG-PSPKAVEAIEKELSKIH-----RYPEPDAPELREALSKYTGVPVENIIVGGDGMDEVIDT 102 (361)
T ss_pred CCccceEEccCC--CCCCC-CCHHHHHHHHHHHHhhc-----CCCCCCHHHHHHHHHHHhCCCHHHEEEeCCCHHHHHHH
Confidence 356789999887 45677 67899999888766432 233333478888899888877889999 6777888888
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHH
Q psy14484 110 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIF 189 (430)
Q Consensus 110 al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 189 (430)
+++++.. +++.|++.+++|..+....... ......++.+.++.. |++
T Consensus 103 ~~~~~~~--------~gd~vlv~~p~y~~~~~~~~~~-------------g~~~~~~~~~~~~~~------------~~~ 149 (361)
T PRK00950 103 LMRTFID--------PGDEVIIPTPTFSYYEISAKAH-------------GAKPVYAKREEDFSL------------DVD 149 (361)
T ss_pred HHHHhcC--------CCCEEEEcCCChHHHHHHHHHc-------------CCEEEEeecCCCCCc------------CHH
Confidence 8887653 5678999899887653322221 122233332222222 788
Q ss_pred HHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccc-cccCCCCCceee
Q psy14484 190 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA-CEHAEIWPDFLC 268 (430)
Q Consensus 190 ~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~-~~~~~~~~d~~~ 268 (430)
++++.+. ++++++++.. ++|++|.+.+ .+++.++|+++|+++|+||+|.+|. .+.... ....+....+.+
T Consensus 150 ~l~~~~~---~~~~~v~~~~-p~nptG~~~~----~~~l~~l~~~~~~~li~De~y~~~~-~~~~~~~~~~~~~vi~~~S 220 (361)
T PRK00950 150 SVLNAIT---EKTKVIFLCT-PNNPTGNLIP----EEDIRKILESTDALVFVDEAYVEFA-EYDYTPLALEYDNLIIGRT 220 (361)
T ss_pred HHHHHhc---cCCCEEEEeC-CCCCCCCCcC----HHHHHHHHHHCCcEEEEECchhhhC-ccchHHHHHhcCCEEEEEe
Confidence 8888875 3566666666 7888998877 7788899999999999999998774 111111 111111122348
Q ss_pred eecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHc
Q psy14484 269 LSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTS 347 (430)
Q Consensus 269 ~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~ 347 (430)
|||.++ .| +|+|++++++++++.+.. ...++..+++++.++.++++ ..++.++..+..+..++.+.+
T Consensus 221 ~SK~~g~~G-lRiG~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~ 288 (361)
T PRK00950 221 FSKVFGLAG-LRIGYGFVPEWLIDYYMR--------AKTPFSLTRLSQAAAIAALS---DKEYIEKSIEHGIKSREYLYN 288 (361)
T ss_pred ehHhhcCch-hhcchhcCCHHHHHHHHH--------hcCCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHh
Confidence 999998 46 899999999999887765 23345566777777766664 233444443333344444432
Q ss_pred hhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-------CCEEEEeCCCCCCHHHHHHHHHH
Q psy14484 348 LITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-------GNTVYLMPPYILNKNEIQHMTSA 420 (430)
Q Consensus 348 l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-------~~~lR~~~~~~~t~e~i~~~~~~ 420 (430)
. +. +...+..|.++++.+. .. . +.++++.|.++||.+.++ .+++|++++ +++++++++++
T Consensus 289 ~--l~-~~~~~~~~~~i~~~~~-~~---~---~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRis~~---~~~~~~~l~~~ 355 (361)
T PRK00950 289 E--LP-FKVYPSEANFVLVDVT-PM---T---AKEFCEELLKRGVIVRDCTSFRGLGDYYIRVSIG---TFEENERFLEI 355 (361)
T ss_pred h--cC-eeECCCcceEEEEECC-CC---C---HHHHHHHHHHCCEEEeeCCccCCCCCCeEEEECC---CHHHHHHHHHH
Confidence 1 11 1122345666666554 21 1 367999999999999874 257999866 88899999999
Q ss_pred HHHHH
Q psy14484 421 IFQTF 425 (430)
Q Consensus 421 l~~~l 425 (430)
|++++
T Consensus 356 L~~il 360 (361)
T PRK00950 356 LKEIV 360 (361)
T ss_pred HHHHh
Confidence 98865
No 119
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.94 E-value=4.3e-24 Score=207.69 Aligned_cols=338 Identities=10% Similarity=0.064 Sum_probs=218.6
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhccc--cccCCCCCHHHHHHHHHHHhhcC--CCC-CeEEEcCCchHHHH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEH--VMLSNLTHKPVIKLSEKLSSLTQ--YKL-GHCFYGSDGASAVE 108 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~--~~~-~~v~~~~sgteA~~ 108 (430)
+..+||..|.. .+++ .+|.+.+++.+.+..... +....+..++++.+++++.+.++ ..+ ++|++|+|+++++.
T Consensus 39 ~~~i~l~~g~~-~~~~-p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~ 116 (405)
T PRK06207 39 GRPVDFSHGDV-DAHE-PTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALF 116 (405)
T ss_pred CCceecCCcCC-CCCC-CCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHH
Confidence 56678776532 2232 567888888887754321 22223445677888888888765 455 78999999999999
Q ss_pred HHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC-----CCCCCCCCCChhHH
Q psy14484 109 VALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP-----DSRNINKGNSANEI 183 (430)
Q Consensus 109 ~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 183 (430)
.++++++. +++.|++.+|+|.++.......+. ....++.. ..+..
T Consensus 117 ~~~~~l~~--------~Gd~Vlv~~P~y~~~~~~~~~~g~-------------~v~~v~~~~~~~~~~~~~--------- 166 (405)
T PRK06207 117 LAVAATVA--------RGDKVAIVQPDYFANRKLVEFFEG-------------EMVPVQLDYLSADKRAGL--------- 166 (405)
T ss_pred HHHHHhcC--------CCCEEEEeCCCchhHHHHHHHcCC-------------EEEEEeccccCcccCCCc---------
Confidence 99998765 678999999999887543333221 12222221 11111
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccc-ccccCCC
Q psy14484 184 ARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-ACEHAEI 262 (430)
Q Consensus 184 ~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~-~~~~~~~ 262 (430)
|+++|++++++ +++++++.. ++|++| ...+.+.+++|.++|++||+++|+||+|..+...+... .+.....
T Consensus 167 ---d~~~l~~~~~~---~~k~v~l~~-P~NPTG-~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ 238 (405)
T PRK06207 167 ---DLDQLEEAFKA---GVRVFLFSN-PNNPAG-VVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPI 238 (405)
T ss_pred ---CHHHHHHhhhh---cCeEEEECC-CCCCCC-cCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCC
Confidence 78899988863 456666665 678888 55677889999999999999999999999875544321 1111122
Q ss_pred CC-c---eeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--hcCHHHHHH
Q psy14484 263 WP-D---FLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRIS 335 (430)
Q Consensus 263 ~~-d---~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~~~~ 335 (430)
.+ . +.+|||.++ .| +|+|++++++++++.+.. .......+.+.+.+.++.++|+.-. -+...+..+
T Consensus 239 ~~~~vi~i~SfSK~~~lpG-lRiG~ii~~~~l~~~~~~------~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~ 311 (405)
T PRK06207 239 DPENVITIMGPSKTESLSG-YRLGVAFGSPAIIDRMEK------LQAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQ 311 (405)
T ss_pred CcCcEEEEecchhhccCcc-cceEEEEcCHHHHHHHHH------HHhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 22 2 337899987 57 899999999999888765 1122233445566666666664200 012233334
Q ss_pred HHHHHHHHHHHchhcCCCeeeEeec-ceEEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec-------CCEEEEeCC
Q psy14484 336 QDMKKITKALTSLITHPKIINFRQK-GMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------GNTVYLMPP 406 (430)
Q Consensus 336 ~~~~~l~~~l~~l~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~-------~~~lR~~~~ 406 (430)
+..+.+.+.|+. .+.+....+. |.++++.+. .... . +..+++.|+ ++||.+.|+ ++++|++++
T Consensus 312 ~~r~~l~~~L~~---~~~~~~~~p~gg~fl~~~l~-~~~~-~---~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~ 383 (405)
T PRK06207 312 AIRDDLLRVLRG---VEGVFVRAPQAGSYLFPRLP-RLAV-S---LHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFS 383 (405)
T ss_pred HHHHHHHHHHhc---CCCceecCCCeeEEEEEeCc-ccCC-C---HHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEec
Confidence 444444444443 3333333343 566767665 3111 1 356888886 679999985 258999776
Q ss_pred CCCCHHHHHHHHHHHHHHHHHh
Q psy14484 407 YILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 407 ~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.+++++++.+++|.+++++.
T Consensus 384 --~~~~~l~~al~rl~~~l~~~ 403 (405)
T PRK06207 384 --QDHAAAVAAAERIAQLIERY 403 (405)
T ss_pred --CCHHHHHHHHHHHHHHHHHh
Confidence 47899999999999988764
No 120
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=1.6e-24 Score=208.81 Aligned_cols=330 Identities=10% Similarity=0.071 Sum_probs=211.4
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhccc--cccCCCCCHHHHHHHHHHHhhc----CCCCCeEEEcCCchHHH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEH--VMLSNLTHKPVIKLSEKLSSLT----QYKLGHCFYGSDGASAV 107 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~----~~~~~~v~~~~sgteA~ 107 (430)
.+++|+.+| .++++ .+|.+.+++.+.+..... .+...+..++++.+++.+.+.. .+++++|++|+|+++++
T Consensus 28 ~~~~~l~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al 104 (374)
T PRK02610 28 IQLDRLDTN--EFPYD-LPPDLKQKLAWLYQQGIESNRYPDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELI 104 (374)
T ss_pred cceeEecCC--CCCCC-CCHHHHHHHHHHHhhcccccCCCCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHH
Confidence 358888877 45555 568999999987665211 1111122234444554444332 15778999999999999
Q ss_pred HHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC-CCCCCCCCChhHHHHH
Q psy14484 108 EVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD-SRNINKGNSANEIARC 186 (430)
Q Consensus 108 ~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 186 (430)
..++.+... ++++.|++.+|+|.++.......+. ++..++... .+..
T Consensus 105 ~~~~~~~~~-------~g~~~Vlv~~P~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~------------ 152 (374)
T PRK02610 105 RSLLIATCL-------GGEGSILVAEPTFSMYGILAQTLGI-------------PVVRVGRDPETFEI------------ 152 (374)
T ss_pred HHHHHHHcC-------CCCCeEEEcCCChHHHHHHHHHcCC-------------EEEEecCCcccCCC------------
Confidence 887776543 1445799999999877544333221 222333221 1222
Q ss_pred HHHHHHHHHHhC-CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCc
Q psy14484 187 AIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 265 (430)
Q Consensus 187 d~~~le~~l~~~-~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d 265 (430)
|+++|++++++. ..+++++++.+ ++|++| ...+.+.+++|.++| +++++|+||+|..|.......... ..++
T Consensus 153 d~~~l~~~~~~~~~~~~k~i~l~~-P~NPTG-~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~~~~~~~~---~~~~ 225 (374)
T PRK02610 153 DLAAAQSAIEQTQNPPVRVVFVVH-PNSPTG-NPLTAAELEWLRSLP--EDILVVIDEAYFEFSQTTLVGELA---QHPN 225 (374)
T ss_pred CHHHHHHHHHhhcCCCceEEEEeC-CCCCCC-CCCCHHHHHHHHhcc--CCcEEEEeccccccCccchHHHHh---cCCC
Confidence 789999888642 14678887777 889999 555677788888877 389999999998774221111111 1123
Q ss_pred ---eeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHH---H
Q psy14484 266 ---FLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQD---M 338 (430)
Q Consensus 266 ---~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~---~ 338 (430)
+-+|||.++ .| +|+|++++++++++.+.. ....++.+.+++.++..+|+.. +.+.+.+++. .
T Consensus 226 ~ivi~SfSK~~g~~G-lRiG~~v~~~~l~~~l~~--------~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~r 294 (374)
T PRK02610 226 WVILRTFSKAFRLAA-HRVGYAIGHPELIAVLEK--------VRLPYNLPSFSQLAAQLALEHR--QELLAAIPEILQER 294 (374)
T ss_pred EEEEEecchhccCcc-cceeeeecCHHHHHHHHH--------hcCCCCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHH
Confidence 347999996 46 899999999999888775 1233555777777777666521 2233333222 3
Q ss_pred HHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecCCEEEEeCCCCCCHHHHHHHH
Q psy14484 339 KKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMT 418 (430)
Q Consensus 339 ~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~~~lR~~~~~~~t~e~i~~~~ 418 (430)
+.+.+.|+. ++.+...+..|.++++.+. ... . +..+++.|.++||.+.+..+++|+++. +++++++++
T Consensus 295 ~~l~~~L~~---~~~~~~~p~~g~f~~~~l~-~~~--~---~~~~~~~l~~~gi~v~~~~~~lRls~~---~~~~~~~~l 362 (374)
T PRK02610 295 DRLYQALQE---LPQLRVWPSAANFLYLRLS-QDA--A---LAALHQALKAQGTLVRHTGGGLRITIG---TPEENQRTL 362 (374)
T ss_pred HHHHHHHHh---CCCcEeCCCcceEEEEeCC-CCC--C---HHHHHHHHHHCCEEEEeCCCeEEEeCC---CHHHHHHHH
Confidence 334444433 3333333455777776665 321 1 367888899999999888889999865 567899999
Q ss_pred HHHHHHHHHh
Q psy14484 419 SAIFQTFNEV 428 (430)
Q Consensus 419 ~~l~~~l~~~ 428 (430)
++|++++..+
T Consensus 363 ~~l~~~l~~~ 372 (374)
T PRK02610 363 ERLQAALTQL 372 (374)
T ss_pred HHHHHHHhhc
Confidence 9999988765
No 121
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=1.1e-24 Score=209.00 Aligned_cols=321 Identities=11% Similarity=0.125 Sum_probs=211.3
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVAL 111 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al 111 (430)
++.+++||..| .+.++ .+|++.+++.+.+.... .|+.....+|++.+++.++.++++|++|+|+++++..++
T Consensus 28 ~~~~~i~l~~~--~~~~~-~~~~~~~~~~~~~~~~~-----~Y~~~~~~~lr~~ia~~~~~~~~~I~it~G~~~al~~~~ 99 (357)
T PRK14809 28 DPDDLVKLSSN--ENPHG-PSPAAVEAIREAAERVH-----SYPKASHADLTAALADRWDVSPEQVWLANGGDGALDYLA 99 (357)
T ss_pred CccceeEecCC--CCCCC-CCHHHHHHHHHHHhhhh-----cCCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHH
Confidence 46689999887 56666 57889999888765422 233333557888888888888999999999999999999
Q ss_pred HHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHH
Q psy14484 112 KMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDL 191 (430)
Q Consensus 112 ~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 191 (430)
+++.. +++.|++.+|+|..+.......+ .....++.+...... .+++++
T Consensus 100 ~~~~~--------~gd~V~v~~P~y~~~~~~~~~~g-------------~~~~~~~l~~~~~~~----------~~~~~~ 148 (357)
T PRK14809 100 RAMLD--------PGDTVLVPDPGFAYYGMSARYHH-------------GEVREYPVSKADDFE----------QTADTV 148 (357)
T ss_pred HHhcC--------CCCEEEEeCCChHHHHHHHHHcC-------------CeEEEEecccCcCCC----------cCHHHH
Confidence 88765 66889999999875533222111 122333332110000 145665
Q ss_pred HHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccc-cccCCCCCceeeee
Q psy14484 192 EILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA-CEHAEIWPDFLCLS 270 (430)
Q Consensus 192 e~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~-~~~~~~~~d~~~~s 270 (430)
++... +++++++.. ++|++| ...+.+.+++|.+.|++ ++++|+||+|..|...+.... .+..+....+.+||
T Consensus 149 ~~~~~----~~k~i~l~~-p~NPTG-~~~s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfS 221 (357)
T PRK14809 149 LDAYD----GERIVYLTS-PHNPTG-SEIPLDEVEALAERTDE-ETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFS 221 (357)
T ss_pred HHhhc----CCcEEEEeC-CCCCCC-cCCCHHHHHHHHHhCcc-CcEEEEechhhhccCCchhHHHHhhCCCEEEEecch
Confidence 55442 345566666 788999 55566678888888875 789999999998754433211 11111122344799
Q ss_pred cccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHc-h
Q psy14484 271 KGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTS-L 348 (430)
Q Consensus 271 K~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~-l 348 (430)
|.++ .| +|+|++++++++++.+.. ...+++.+.+++.++.++|. ++++.+..++..+..++.+.+ +
T Consensus 222 K~~~~~G-lRiG~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~L 289 (357)
T PRK14809 222 KAYGLAG-LRLGYAVVPEEWADAYAR--------VNTPFAASELACRAGLAALD---DDEHVERTVETARWAREYIREEL 289 (357)
T ss_pred hHhcCcc-hhheeeecCHHHHHHHHH--------hCCCCCCCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHh
Confidence 9997 57 899999999999888875 23466778888777777664 233333333333333333322 2
Q ss_pred hcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-----CEEEEeCCCCCCHHHHHHHHHHHHH
Q psy14484 349 ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-----NTVYLMPPYILNKNEIQHMTSAIFQ 423 (430)
Q Consensus 349 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-----~~lR~~~~~~~t~e~i~~~~~~l~~ 423 (430)
... ..+..|+++++.+. + ..++++.|.++||.+.++. +++|+++. +++++++++++|++
T Consensus 290 ~~~----~~~~~g~f~~~~~~-~--------~~~~~~~l~~~gv~v~~g~~f~~~~~iRls~~---~~~~~~~~l~~L~~ 353 (357)
T PRK14809 290 DAP----TWESAGNFVLAEVG-D--------ASAVAEAAQERGVIVRDCTSFGLPECIRITCG---TREETERAVEVLNE 353 (357)
T ss_pred cCc----cCCCCCCEEEEECC-C--------HHHHHHHHHHCCEEEEECccCCCCCeEEEecC---CHHHHHHHHHHHHH
Confidence 211 12456778777654 2 2568888999999999862 68999754 68899999999998
Q ss_pred HHH
Q psy14484 424 TFN 426 (430)
Q Consensus 424 ~l~ 426 (430)
+++
T Consensus 354 ~l~ 356 (357)
T PRK14809 354 VLA 356 (357)
T ss_pred Hhc
Confidence 764
No 122
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.94 E-value=4.7e-25 Score=210.78 Aligned_cols=317 Identities=15% Similarity=0.202 Sum_probs=211.2
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKM 113 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~ 113 (430)
.++|||.+| .+.++ .+|++++++.+++.... .+......++++.+++.++.+++++++++|+++++..+++.
T Consensus 19 ~~~i~l~~~--~~~~~-~~~~~~~a~~~~~~~~~-----~y~~~~~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~ 90 (346)
T TIGR01141 19 KEVIKLNSN--ENPFG-PPPKAKEALRAEADKLH-----RYPDPDPAELKQALADYYGVDPEQILLGNGSDEIIELLIRA 90 (346)
T ss_pred CceEEccCC--CCCCC-CCHHHHHHHHHhHHHhh-----cCCCCCHHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHH
Confidence 479999887 45666 57899999998765432 22222236788888888877788999999999999888887
Q ss_pred HHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHH
Q psy14484 114 SFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEI 193 (430)
Q Consensus 114 ~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~ 193 (430)
+.. +++.|++.+++|..+...... ...+...++...... .|++++++
T Consensus 91 l~~--------~gd~v~~~~p~y~~~~~~~~~-------------~g~~~~~~~~~~~~~------------~d~~~l~~ 137 (346)
T TIGR01141 91 FLE--------PGDAVLVPPPTYSMYEISAKI-------------HGAEVVKVPLDEDGQ------------LDLEDILV 137 (346)
T ss_pred hcC--------CCCEEEEcCCCHHHHHHHHHH-------------cCCeEEEeccCCCCC------------CCHHHHHH
Confidence 653 567899999888543221111 112223343332211 17888888
Q ss_pred HHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCcee---eee
Q psy14484 194 LLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL---CLS 270 (430)
Q Consensus 194 ~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~---~~s 270 (430)
.+. +++++++++. ++|++|...+ .+.+.++.+.|+ +++++|+||+|.++...+... ......++++ ++|
T Consensus 138 ~~~---~~~~~v~l~~-p~NptG~~~~-~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~~~~--~~~~~~~~~i~~~S~s 209 (346)
T TIGR01141 138 AID---DKPKLVFLCS-PNNPTGNLLS-RSDIEAVLERTP-EDALVVVDEAYGEFSGEPSTL--PLLAEYPNLIVLRTLS 209 (346)
T ss_pred hcC---CCCCEEEEeC-CCCCCCCCCC-HHHHHHHHHhCC-CCcEEEEECchhhhcCCccHH--HHHhhCCCEEEEehhh
Confidence 763 4677777777 8888996655 444444444444 499999999998765432211 1111223433 688
Q ss_pred cccCC-CccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHch
Q psy14484 271 KGITG-GYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKALTSL 348 (430)
Q Consensus 271 K~l~g-G~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~l 348 (430)
|.++. | +|+|++++++++.+.+.. ...+++.+++++.++.+.++... .....++++++.+++.+.|+++
T Consensus 210 K~~g~~G-~r~G~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 280 (346)
T TIGR01141 210 KAFGLAG-LRIGYAIANAEIIDALNK--------VRAPFNLSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKL 280 (346)
T ss_pred Hhhhchh-hhceeeecCHHHHHHHHh--------ccCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99964 6 799999999999888765 22356667888887777765322 1234455566666666666544
Q ss_pred hcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec------CCEEEEeCCCCCCHHHHHHHHHHHH
Q psy14484 349 ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI------GNTVYLMPPYILNKNEIQHMTSAIF 422 (430)
Q Consensus 349 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~------~~~lR~~~~~~~t~e~i~~~~~~l~ 422 (430)
+++...+..|.++++++. . . +.++.+.|.++||.+.++ .+.+|++++ ++++++++++.|+
T Consensus 281 ---~g~~~~~~~g~~~~~~~~-~----~---~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 281 ---PGLEVYPSDANFVLIRFP-R----D---ADALFEALLEKGIIVRDLNSYPGLPNCLRITVG---TREENDRFLAALR 346 (346)
T ss_pred ---CCCEECCCcCCEEEEecC-C----C---HHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecC---CHHHHHHHHHHhC
Confidence 333323445777777765 3 1 367899999999999885 368999865 8999999998763
No 123
>PRK07324 transaminase; Validated
Probab=99.94 E-value=1.1e-24 Score=209.64 Aligned_cols=337 Identities=14% Similarity=0.122 Sum_probs=214.4
Q ss_pred EEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC-CCCCeEEEcCCchHH
Q psy14484 28 LIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ-YKLGHCFYGSDGASA 106 (430)
Q Consensus 28 ~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~v~~~~sgteA 106 (430)
-++..|..++++..+ ...+. .++.+ +++.+++......+ .......++++.+++.+. .++++|++|+|+++|
T Consensus 20 ~~~~~~~~~~~~~~~--e~~~~-~~~~~-~~~~~~~~~~~~~Y---~~~~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~a 92 (373)
T PRK07324 20 TYDIAESCIDSLTLE--ELLAL-AGKNP-EAFYQELGQKKLTY---GWIEGSPEFKEAVASLYQNVKPENILQTNGATGA 92 (373)
T ss_pred ccccccCCCCCCcHH--HHHhc-cCcch-HHHHHHHhcCCccC---CCCCCCHHHHHHHHHHhcCCChhhEEEcCChHHH
Confidence 356666677776554 22222 45566 77777766532211 111223355566666543 467899999999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 186 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (430)
+..++..++. +++.|++..|+|..+.......+ .+.+.++........ .
T Consensus 93 l~~~~~~l~~--------~gd~Vl~~~P~y~~~~~~~~~~g-------------~~v~~v~~~~~~~~~----------~ 141 (373)
T PRK07324 93 NFLVLYALVE--------PGDHVISVYPTYQQLYDIPESLG-------------AEVDYWQLKEENGWL----------P 141 (373)
T ss_pred HHHHHHHhCC--------CCCEEEEcCCCchhHHHHHHHcC-------------CEEEEEecccccCCC----------C
Confidence 9999988764 56789999999976643322222 122334332111100 1
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccc-cccCCCCCc
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA-CEHAEIWPD 265 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~-~~~~~~~~d 265 (430)
|++++++.+. ++++++++.. ++|++| ...+++.+++|.++|++||+++|+||+|.++...+.... .+..+....
T Consensus 142 d~~~l~~~~~---~~~kli~i~~-p~NPtG-~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~ 216 (373)
T PRK07324 142 DLDELRRLVR---PNTKLICINN-ANNPTG-ALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGIS 216 (373)
T ss_pred CHHHHHHhCC---CCCcEEEEeC-CCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEE
Confidence 7788888774 4677888877 888998 566788899999999999999999999998755432111 111111122
Q ss_pred eeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHH----HHHHHHH
Q psy14484 266 FLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQR----ISQDMKK 340 (430)
Q Consensus 266 ~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~----~~~~~~~ 340 (430)
+-+|||.++ .| +|+|++++++++++.+.. .....+++.+.++..++..+|+. .+.+.++ ++++.+.
T Consensus 217 ~~s~SK~~~~~G-~RiG~i~~~~~li~~~~~------~~~~~~~~~~~~~q~~a~~~l~~--~~~~l~~~~~~~~~~~~~ 287 (373)
T PRK07324 217 TNSMSKTYSLPG-IRVGWIAANEEVIDILRK------YRDYTMICAGVFDDMLASLALEH--RDAILERNRKIVRTNLAI 287 (373)
T ss_pred EecchhhcCCcc-ceeEEEecCHHHHHHHHH------HhCcEEecCChHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHH
Confidence 447999987 46 899999999999888775 33344566777777777766642 1223333 3333334
Q ss_pred HHHHHHchhcCCCeeeEeecceEE-EEEEeecCCccchhHHHHHHHHHH-HCCcEEeec-----CCEEEEeCCCCCCHHH
Q psy14484 341 ITKALTSLITHPKIINFRQKGMIW-AFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-----GNTVYLMPPYILNKNE 413 (430)
Q Consensus 341 l~~~l~~l~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~-----~~~lR~~~~~~~t~e~ 413 (430)
+.+.|+ ..+.+..+.+.|.++ ++.+. .. . . ..+++++|+ ++||.+.|+ .+++|++.+ .+++.
T Consensus 288 l~~~l~---~~~~~~~~~p~gg~~~~i~~~-~~-~--~--~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~--~~~~~ 356 (373)
T PRK07324 288 LDEWVA---KEPRVSYVKPKAVSTSFVKLD-VD-M--P--SEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYC--CDTET 356 (373)
T ss_pred HHHHHh---cCCCceEECCCceEEEEEEeC-CC-C--C--HHHHHHHHHHhcCEEEECccccCCCCeEEEEec--CCHHH
Confidence 444443 334444455555543 34443 21 1 1 356888865 679999986 268899654 57899
Q ss_pred HHHHHHHHHHHHHH
Q psy14484 414 IQHMTSAIFQTFNE 427 (430)
Q Consensus 414 i~~~~~~l~~~l~~ 427 (430)
+.+.+++|++++.+
T Consensus 357 l~~~l~rl~~~l~~ 370 (373)
T PRK07324 357 LKKGLKKLSEFLRE 370 (373)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998875
No 124
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.94 E-value=5.9e-24 Score=206.78 Aligned_cols=334 Identities=11% Similarity=0.048 Sum_probs=218.3
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhcccc-ccCCCCCHHHHHHHHHHHhhcC--CCC-CeEEEcCCchHHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHV-MLSNLTHKPVIKLSEKLSSLTQ--YKL-GHCFYGSDGASAV 107 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~--~~~-~~v~~~~sgteA~ 107 (430)
.+..++||..| ...++ .++.+.+++.+.+.....+ +...+..++++.+++.+.+..+ .++ ++|++|+|+++|+
T Consensus 30 ~~~~~i~l~~g--~p~~~-~~~~~~~~~~~~~~~~~~~~y~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al 106 (399)
T PRK07681 30 AGHKMIDLSIG--NPDMP-PADFVREEMVHTANQKESYGYTLSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGL 106 (399)
T ss_pred cCCCeEEeCCC--CCCCC-CCHHHHHHHHHHHhccccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHH
Confidence 46688999887 34454 4678888888876543222 1123344566777777765543 466 7899999999999
Q ss_pred HHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHH
Q psy14484 108 EVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCA 187 (430)
Q Consensus 108 ~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 187 (430)
..++++++. +++.|++.+|+|.++.......+. ....++.+..... ..|
T Consensus 107 ~~~~~~~~~--------~Gd~Vlv~~P~y~~~~~~~~~~G~-------------~~~~v~~~~~~~~----------~~d 155 (399)
T PRK07681 107 VHLPMVYAN--------PGDIILVPDPGYTAYETGIQMAGA-------------TSYYMPLKKENDF----------LPD 155 (399)
T ss_pred HHHHHHhCC--------CCCEEEECCCCccchHHHHHhcCC-------------EEEEEecCCCCCC----------cCC
Confidence 999887765 668899999999887554433222 2233333211110 016
Q ss_pred HHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccc-c-cccCC---C
Q psy14484 188 IFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-A-CEHAE---I 262 (430)
Q Consensus 188 ~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~-~-~~~~~---~ 262 (430)
++++++.+. ++++++++.. ++|++| ...+.+.+++|.++|++||+++|+||+|..+...+... . .+..+ .
T Consensus 156 ~~~l~~~~~---~~~k~v~l~~-P~NPTG-~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~ 230 (399)
T PRK07681 156 LELIPEEIA---DKAKMMILNF-PGNPVP-AMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEV 230 (399)
T ss_pred HHHHHHhcc---ccceEEEEeC-CCCCcC-cCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCccc
Confidence 788887774 3567777765 678888 56678889999999999999999999999775433211 1 11111 1
Q ss_pred CCceeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--hcCHHHHHHHHHH
Q psy14484 263 WPDFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQDMK 339 (430)
Q Consensus 263 ~~d~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~~~ 339 (430)
...+-+|||.++ .| +|+|++++++++++.+.. ......++.+.+++.++.++|+... -+...+.++++.+
T Consensus 231 ~i~~~S~SK~~~~~G-lRiG~~i~~~~l~~~~~~------~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 303 (399)
T PRK07681 231 GVEINSLSKSYSLAG-SRIGYMIGNEEIVRALTQ------FKSNTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERRD 303 (399)
T ss_pred EEEEeecccccCCcc-ceeEEEecCHHHHHHHHH------HHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 122447999997 57 899999999999888765 2223355667777777777765211 0122334455555
Q ss_pred HHHHHHHchhcCCCeeeE-eecceEEEEEEeecCCccchhHHHHHHHHHHH-CCcEEeec-------CCEEEEeCCCCCC
Q psy14484 340 KITKALTSLITHPKIINF-RQKGMIWAFDVIIEDPEQIETFSKKFFVAALK-NELLLRPI-------GNTVYLMPPYILN 410 (430)
Q Consensus 340 ~l~~~l~~l~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~-~Gv~~~~~-------~~~lR~~~~~~~t 410 (430)
.+.+.|++. + +... +..|.++++.+. ... . +.++++.+++ +||.+.|+ .+++|++++ .+
T Consensus 304 ~l~~~L~~~---g-~~~~~p~~g~f~~~~l~-~~~---~--~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~--~~ 371 (399)
T PRK07681 304 TLVDGFRTF---G-WNVDKPAGSMFVWAEIP-KGW---T--SLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALV--QD 371 (399)
T ss_pred HHHHHHHHC---C-CcccCCCeeeEEEEECC-CCC---C--HHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEec--CC
Confidence 555555543 2 2222 233666666665 321 1 3568888877 89999874 257899766 57
Q ss_pred HHHHHHHHHHHHH
Q psy14484 411 KNEIQHMTSAIFQ 423 (430)
Q Consensus 411 ~e~i~~~~~~l~~ 423 (430)
++++++++++|++
T Consensus 372 ~~~~~~~l~~l~~ 384 (399)
T PRK07681 372 EEVLQQAVENIRN 384 (399)
T ss_pred HHHHHHHHHHHHH
Confidence 8999999999987
No 125
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=4.2e-24 Score=204.22 Aligned_cols=320 Identities=12% Similarity=0.117 Sum_probs=212.4
Q ss_pred EEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHH
Q psy14484 35 RYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMS 114 (430)
Q Consensus 35 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~ 114 (430)
..+|+..| .+.++ .+|.+.+++.+.+.... ...+..+...++++.+++.++..+++|++++|+++++..+++++
T Consensus 23 ~~~~l~~~--~~~~~-~p~~~~~a~~~~~~~~~---~~~y~~~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l 96 (351)
T PRK14807 23 YKYKMDAN--ETPFE-LPEEVIKNIQEIVKSSQ---VNIYPDPTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAF 96 (351)
T ss_pred ceeEccCC--CCCCC-CCHHHHHHHHHHhhcCc---ccCCCCccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHh
Confidence 34677766 44555 57899999988775321 11333444578888899988878899999999999999988877
Q ss_pred HHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHH
Q psy14484 115 FHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEIL 194 (430)
Q Consensus 115 ~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~ 194 (430)
.. +++.|++.+|+|.++.......+ .....++.+..+.. |+++++++
T Consensus 97 ~~--------~gd~Vlv~~p~y~~~~~~~~~~g-------------~~~~~v~~~~~~~~------------d~~~l~~~ 143 (351)
T PRK14807 97 IN--------KGDVVIYPHPSFAMYSVYSKIAG-------------AVEIPVKLKEDYTY------------DVGSFIKV 143 (351)
T ss_pred cC--------CCCEEEEeCCChHHHHHHHHHcC-------------CeEEEeecCCCCCC------------CHHHHHHH
Confidence 54 66889999999986543322211 12233333322222 78899988
Q ss_pred HHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccc-cccCCCCCceeeeeccc
Q psy14484 195 LKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA-CEHAEIWPDFLCLSKGI 273 (430)
Q Consensus 195 l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~-~~~~~~~~d~~~~sK~l 273 (430)
++. .+++++++.. ++|++|...+ .+++.++|++++.++|+||+|.++. ...... ....+...-+-+|||.+
T Consensus 144 ~~~--~~~k~v~l~~-p~NPtG~~~~----~~~l~~l~~~~~~~~ivDe~y~~~~-~~~~~~~~~~~~~vi~~~S~SK~~ 215 (351)
T PRK14807 144 IEK--YQPKLVFLCN-PNNPTGSVIE----REDIIKIIEKSRGIVVVDEAYFEFY-GNTIVDVINEFENLIVLRTLSKAF 215 (351)
T ss_pred hhc--cCCCEEEEeC-CCCCCCCCCC----HHHHHHHHHhCCCEEEEeCcchhhc-ccchHHHhhhCCCEEEEecchHhc
Confidence 863 3677777777 8899997766 6777888888888999999998763 111111 11111112233799999
Q ss_pred C-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcCC
Q psy14484 274 T-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHP 352 (430)
Q Consensus 274 ~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~ 352 (430)
+ .| +|+|++++++++++.+.. ....+..+.+++.++.+.|+.-.-++..+.++++.+++.+.|+++ +
T Consensus 216 ~~~G-lRiG~~v~~~~~~~~~~~--------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~---~ 283 (351)
T PRK14807 216 GLAG-LRVGYAVANENILKYLNL--------VKSPYNINSLSQVIALKVLRTGVLKERVNYILNERERLIKELSKI---P 283 (351)
T ss_pred ccch-hceeeeecCHHHHHHHHH--------ccCCCCcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhC---C
Confidence 7 57 899999999999888765 122345567777777777652111223344455555565655543 3
Q ss_pred CeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 353 KIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI------GNTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 353 ~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~------~~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
++...++.|.++++.+. + ...+++.|.++||.+.++ .+++|++++ ++++.+.+++.|++++
T Consensus 284 g~~~~~~~~~~~~i~~~-~--------~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~~---~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 284 GIKVYPSKTNFILVKFK-D--------ADYVYQGLLERGILVRDFSKVEGLEGALRITVS---SCEANDYLINGLKELL 350 (351)
T ss_pred CcEECcCCccEEEEEcC-C--------HHHHHHHHHHCCEEEEECCCCCCCCCeEEEEcC---CHHHHHHHHHHHHHhh
Confidence 33334556777666554 2 357889999999999764 257999865 6788899998887753
No 126
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.94 E-value=2.3e-24 Score=211.63 Aligned_cols=314 Identities=14% Similarity=0.036 Sum_probs=203.5
Q ss_pred CHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEE
Q psy14484 52 NSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFIC 131 (430)
Q Consensus 52 ~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~ 131 (430)
.|.+.+++.+.......++...+..++.+.+++++.+..+ ..++|++|+|+++|+..+++++.. +++.|++
T Consensus 100 ~p~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~-~~~~Iiit~G~~~al~~~~~~l~~--------pgd~Vlv 170 (431)
T PRK15481 100 LPDLSRYFARLSRTPRLYGDAPVSPELHAWAARWLRDDCP-VAFEIDLTSGAIDAIERLLCAHLL--------PGDSVAV 170 (431)
T ss_pred hHHHHHHHHHhhhhhhhcCCcCCCHHHHHHHHHHHhhccC-CcCeEEEecCcHHHHHHHHHHhCC--------CCCEEEE
Confidence 3566777766544332222222233444455554443332 346899999999999999998765 6788999
Q ss_pred EcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEcccc
Q psy14484 132 LQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLV 211 (430)
Q Consensus 132 ~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v 211 (430)
.+|+|.++.......+. ....++.+.. .. |+++|+++++. +++++++.|.+
T Consensus 171 ~~P~y~~~~~~~~~~g~-------------~~~~v~~~~~--g~-----------~~~~l~~~~~~---~~k~i~~~p~p 221 (431)
T PRK15481 171 EDPCFLSSINMLRYAGF-------------SASPVSVDAE--GM-----------QPEKLERALAQ---GARAVILTPRA 221 (431)
T ss_pred eCCCcHHHHHHHHHcCC-------------eEEeeccCCC--CC-----------CHHHHHHHHhc---CCCEEEECCCC
Confidence 99999887544443222 2233333211 11 78899988863 46666666437
Q ss_pred ccCCCcccCChHHHHHHHHHHHhc-CCEEEEeccccCCCCcccccccccCCCCCc---eeeeecccCCCccccEEEEEcH
Q psy14484 212 QCAGGMIMYDSIYLKLVREICNNY-NIHLIADEIAVGCGRTGKFFACEHAEIWPD---FLCLSKGITGGYLPLSLVMTTD 287 (430)
Q Consensus 212 ~~~~G~~~~~~~~l~~l~~l~~~~-gi~li~DEv~~g~g~~g~~~~~~~~~~~~d---~~~~sK~l~gG~~~ig~~~~~~ 287 (430)
+|++| ...+.+.+++|.++|+++ ++++|.||+|..|...+....... ..+. +-+|||.++.| +|+|++++++
T Consensus 222 ~NPTG-~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~--~~~~vi~~~SfSK~~~~G-lRiG~~i~~~ 297 (431)
T PRK15481 222 HNPTG-CSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQ--TTQRWALIRSVSKALGPD-LRLAFVASDS 297 (431)
T ss_pred CCCCC-ccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcC--CCCCEEEEeeeccccCCC-ceeEEEeCCH
Confidence 88888 556788899999999999 999999999997743321111111 1223 33799999977 8999999999
Q ss_pred HHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh----cCHHHHHHHHHHHHHHHHHchhcCCCeee-Eeecce
Q psy14484 288 KIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK----DNILQRISQDMKKITKALTSLITHPKIIN-FRQKGM 362 (430)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~----~~~~~~~~~~~~~l~~~l~~l~~~~~~~~-~~~~g~ 362 (430)
++++.+.. .....+++.+.+++.++.++|+.-.- ....+.+++..+.+.+.|++. . +.. .+..|+
T Consensus 298 ~~~~~~~~------~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~---~-~~~~~p~gg~ 367 (431)
T PRK15481 298 ATSARLRL------RLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY---G-IAIPSPGDGL 367 (431)
T ss_pred HHHHHHHH------HHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc---C-CccccCCCeE
Confidence 98887754 11223345677888888777752110 122344455555555555543 2 222 234466
Q ss_pred EEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec--------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 363 IWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI--------GNTVYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 363 ~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~--------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
++++.+. .+ ..++++.|.++||.+.|+ ++++|++++. .+++++++++++|.++++
T Consensus 368 f~~~~l~-~~-------~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 368 NLWLPLD-TD-------SQATALTLAKSGWLVREGEAFGVSAPSHGLRITLST-LNDAEINRLAADLHQALN 430 (431)
T ss_pred EEEEECC-CC-------HHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCC-CChHHHHHHHHHHHHHhc
Confidence 6666665 31 256888888999999984 1479998764 568999999999998875
No 127
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.94 E-value=6.8e-24 Score=202.82 Aligned_cols=321 Identities=16% Similarity=0.201 Sum_probs=213.1
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKM 113 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~ 113 (430)
.+++||..| .+.+|. +|.+.+++.+.+.... .|+.....++++.+++.++.++++|++|+|+++++..++++
T Consensus 19 ~~~~~l~~~--~~~~~~-p~~~~~a~~~~~~~~~-----~Y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~ 90 (354)
T PRK06358 19 NMILDFSAN--INPLGV-PESLKQAITENLDKLV-----EYPDPDYLELRKRIASFEQLDLENVILGNGATELIFNIVKV 90 (354)
T ss_pred cceEEecCC--CCCCCC-CHHHHHHHHHHHHhhh-----cCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHH
Confidence 457898776 566664 7899999988765432 23333456888888888888899999999999999998886
Q ss_pred HHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHH
Q psy14484 114 SFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEI 193 (430)
Q Consensus 114 ~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~ 193 (430)
+ . + +.|++.+|+|+.+.......+ .....++........ -| +++.+
T Consensus 91 ~-~--------~-~~v~i~~P~y~~~~~~~~~~g-------------~~~~~~~~~~~~~~~----------~d-~~~~~ 136 (354)
T PRK06358 91 T-K--------P-KKVLILAPTFAEYERALKAFD-------------AEIEYAELTEETNFA----------AN-EIVLE 136 (354)
T ss_pred h-C--------C-CcEEEecCChHHHHHHHHHcC-------------CeeEEEeCccccCCC----------cc-HHHHH
Confidence 4 2 3 478899999987754332221 122333332110000 04 34444
Q ss_pred HHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccc-ccccCCCCCc---eeee
Q psy14484 194 LLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-ACEHAEIWPD---FLCL 269 (430)
Q Consensus 194 ~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~-~~~~~~~~~d---~~~~ 269 (430)
.+. .+++++++.. ++|++| ...+.+.+++|.++|+++++++|+||+|..|...+... ........+. +-+|
T Consensus 137 ~~~---~~~~~v~~~~-P~NPtG-~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~ 211 (354)
T PRK06358 137 EIK---EEIDLVFLCN-PNNPTG-QLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAF 211 (354)
T ss_pred hhc---cCCCEEEEeC-CCCCCC-CccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEec
Confidence 443 2355554444 578888 56788889999999999999999999999875544211 1111222233 3379
Q ss_pred ecccC-CCccccEEEEEc-HHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh-cCHHHHHHHHHHHHHHHHH
Q psy14484 270 SKGIT-GGYLPLSLVMTT-DKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK-DNILQRISQDMKKITKALT 346 (430)
Q Consensus 270 sK~l~-gG~~~ig~~~~~-~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~-~~~~~~~~~~~~~l~~~l~ 346 (430)
||.++ .| +|+|+++++ +.+.+.+.. ....++.+.++..++.++|+.-+. ....+.+++..+++.+.|+
T Consensus 212 SK~~gl~G-~RiG~lv~~~~~~~~~~~~--------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~ 282 (354)
T PRK06358 212 TKFFAIPG-LRLGYGLTSNKNLAEKLLQ--------MREPWSINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLS 282 (354)
T ss_pred hhhccCcc-hhheeeecCCHHHHHHHHH--------hCCCCcchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99998 67 899999985 677777765 123456677777777777742111 2234455556666666665
Q ss_pred chhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-------CCEEEEeCCCCCCHHHHHHHHH
Q psy14484 347 SLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-------GNTVYLMPPYILNKNEIQHMTS 419 (430)
Q Consensus 347 ~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-------~~~lR~~~~~~~t~e~i~~~~~ 419 (430)
++ +++...++.|.++++.+. + ..++++.|.++||.+.++ .+++|+++. ++++.+++++
T Consensus 283 ~~---~~~~~~~~~g~f~~~~~~-~--------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls~~---~~~~~~~l~~ 347 (354)
T PRK06358 283 EF---KGIKVYKPSVNFIFFKLE-K--------PIDLRKELLKKGILIRSCSNYRGLDENYYRVAVK---SREDNKKLLK 347 (354)
T ss_pred cC---CCcEEcCCcceEEEEEcC-c--------hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC---CHHHHHHHHH
Confidence 43 343334567788777665 3 157889999999999985 157999855 8899999999
Q ss_pred HHHHHH
Q psy14484 420 AIFQTF 425 (430)
Q Consensus 420 ~l~~~l 425 (430)
+|++.+
T Consensus 348 ~l~~~~ 353 (354)
T PRK06358 348 ALEVIL 353 (354)
T ss_pred HHHHHh
Confidence 998765
No 128
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.94 E-value=1.5e-23 Score=203.29 Aligned_cols=341 Identities=15% Similarity=0.087 Sum_probs=219.9
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhc-cccccCCCCCHHHHHHHHHHHhhcCC--C-CCeEEEcCCchHHHHH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKL-EHVMLSNLTHKPVIKLSEKLSSLTQY--K-LGHCFYGSDGASAVEV 109 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~--~-~~~v~~~~sgteA~~~ 109 (430)
..++||..|. ..++. ++.+.+++.+.+... ..+....+..++.+.+++.+.+.++. . .++|++|+|+++|+..
T Consensus 30 ~~~i~l~~~~--~~~~~-~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~ 106 (391)
T PRK07309 30 PGILKLTLGE--PDFTT-PDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSA 106 (391)
T ss_pred CCeEEcCCCC--CCCCC-CHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence 4689998874 34553 677888888876532 12222223345556666666654432 2 3689999999999999
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHH
Q psy14484 110 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIF 189 (430)
Q Consensus 110 al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 189 (430)
+++.+.. +++.|++.+|+|.++.......+ .+...++.+...... |++
T Consensus 107 ~~~~~~~--------~gd~vl~~~p~y~~~~~~~~~~g-------------~~~~~~~~~~~~~~~-----------d~~ 154 (391)
T PRK07309 107 SLTAILE--------PGDKVLLPAPAYPGYEPIVNLVG-------------AEIVEIDTTENDFVL-----------TPE 154 (391)
T ss_pred HHHHhcC--------CCCEEEEeCCCCcchHHHHHHcC-------------CEEEEEecCCcCCcC-----------CHH
Confidence 9887754 67789999999998743322211 122333332111111 788
Q ss_pred HHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccc-cccccCC--CCCce
Q psy14484 190 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FACEHAE--IWPDF 266 (430)
Q Consensus 190 ~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~-~~~~~~~--~~~d~ 266 (430)
++++++++.+++++++++.. ++|++| ...+.+.+++|.++|++||+++|+||+|..+...+.. ....... ...-+
T Consensus 155 ~l~~~~~~~~~~~~~i~l~~-P~NPtG-~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~ 232 (391)
T PRK07309 155 MLEKAILEQGDKLKAVILNY-PANPTG-VTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILI 232 (391)
T ss_pred HHHHHhhccCCCeEEEEEEC-CCCCCC-cCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEE
Confidence 99998875444678888876 788888 6667788999999999999999999999977543421 1111111 11123
Q ss_pred eeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--hcCHHHHHHHHHHHHHH
Q psy14484 267 LCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQDMKKITK 343 (430)
Q Consensus 267 ~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~~~~l~~ 343 (430)
-+|||.++ .| +|+|++++++++++.+.. .......+.+.+++.++.++|+... .....+.++++.+++.+
T Consensus 233 ~S~SK~~g~~G-lRvG~~v~~~~~~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 305 (391)
T PRK07309 233 NGLSKSHAMTG-WRIGLIFAPAEFTAQLIK------SHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIE 305 (391)
T ss_pred ecChhhccCcc-ceeEEEEeCHHHHHHHHH------HHhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHH
Confidence 37999987 56 899999999999888765 1122334556777777777665211 12234555666666666
Q ss_pred HHHchhcCCCeeeEeecceE-EEEEEeecCCccchhHHHHHHHHH-HHCCcEEeec-------CCEEEEeCCCCCCHHHH
Q psy14484 344 ALTSLITHPKIINFRQKGMI-WAFDVIIEDPEQIETFSKKFFVAA-LKNELLLRPI-------GNTVYLMPPYILNKNEI 414 (430)
Q Consensus 344 ~l~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~a~~~~~~l-~~~Gv~~~~~-------~~~lR~~~~~~~t~e~i 414 (430)
.|++. . +....+.|.+ +++.++ ...... ..++++.+ .++||.+.|+ ++++|++++ .+++++
T Consensus 306 ~l~~~---~-~~~~~p~gg~~~~~~l~-~~~~~~---~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l 375 (391)
T PRK07309 306 KMTDL---G-FKIIKPDGAFYIFAKIP-AGYNQD---SFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYA--ASMETI 375 (391)
T ss_pred HHHHC---C-CeecCCCeeEEEEEECC-CCCCCC---HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec--CCHHHH
Confidence 66543 2 2233344444 454554 321111 24677664 5689999875 258999766 478999
Q ss_pred HHHHHHHHHHHHHh
Q psy14484 415 QHMTSAIFQTFNEV 428 (430)
Q Consensus 415 ~~~~~~l~~~l~~~ 428 (430)
++++++|++++.+.
T Consensus 376 ~~~i~~l~~~~~~~ 389 (391)
T PRK07309 376 KEAMKRLKEYMEEH 389 (391)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998764
No 129
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.94 E-value=4.2e-24 Score=204.65 Aligned_cols=326 Identities=14% Similarity=0.157 Sum_probs=213.9
Q ss_pred CCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHH
Q psy14484 31 VSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVA 110 (430)
Q Consensus 31 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~a 110 (430)
.++.+++||..| .+++| .+|.+++++.+.+.... .|+.....++++.+++.++.++++|++++|+++++..+
T Consensus 17 ~~~~~~i~l~~~--~~~~~-~p~~~~~a~~~~~~~~~-----~y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~ 88 (356)
T PRK08056 17 ISPDQLLDFSAN--INPLG-MPVSLKRAIIDNLDCAE-----RYPDVEYRHLHQALARHHQVPASWILAGNGETESIFAV 88 (356)
T ss_pred CChhhEEEeccc--cCCCC-CCHHHHHHHHHHHHhcc-----cCcCccHHHHHHHHHHHhCcChhhEEECCCHHHHHHHH
Confidence 356789999876 67777 67889999988766532 23333467888889988888889999999999999988
Q ss_pred HHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHH
Q psy14484 111 LKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFD 190 (430)
Q Consensus 111 l~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 190 (430)
++.+ . +++ +++.+|+|..+.......+ .+...++........ .| ++
T Consensus 89 ~~~l-~--------~g~-viv~~P~y~~~~~~~~~~g-------------~~~~~v~~~~~~~~~----------~~-~~ 134 (356)
T PRK08056 89 VSGL-K--------PRR-AMIVTPGFAEYRRALQQVG-------------CEIRRYSLREADGWQ----------LT-DA 134 (356)
T ss_pred HHHh-C--------CCC-EEEeCCCcHHHHHHHHHcC-------------CeEEEEecccccCCC----------cc-HH
Confidence 8864 2 333 6777888876643322211 222333332111110 02 23
Q ss_pred HHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccc-c-cccCCCCCceee
Q psy14484 191 LEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-A-CEHAEIWPDFLC 268 (430)
Q Consensus 191 le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~-~-~~~~~~~~d~~~ 268 (430)
+++.+. ++++++++.. ++|++|. ..+.+.+++|.++|+++++++|+||+|.+|...+... . ........-+.+
T Consensus 135 ~~~~~~---~~~k~v~l~~-p~NPTG~-~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S 209 (356)
T PRK08056 135 ILEALT---PDLDCLFLCT-PNNPTGL-LPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRS 209 (356)
T ss_pred HHHhcc---CCCCEEEEeC-CcCCCCC-CCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEe
Confidence 444443 4566777766 7888885 6788889999999999999999999998875443211 1 111111112337
Q ss_pred eecccC-CCccccEEEEEc-HHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHH
Q psy14484 269 LSKGIT-GGYLPLSLVMTT-DKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKAL 345 (430)
Q Consensus 269 ~sK~l~-gG~~~ig~~~~~-~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-~~~~~~~~~~~~~~l~~~l 345 (430)
|||.++ .| +|+|+++++ +++++.+.. ....++.+.+++.++..+++.-. .....+.+++..+++.+.|
T Consensus 210 ~SK~~~~~G-~RiG~~v~~~~~~~~~l~~--------~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L 280 (356)
T PRK08056 210 LTKFYAIPG-LRLGYLVNSDDAAVARMRR--------QQMPWSINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQAL 280 (356)
T ss_pred chhhccCcc-hhheeeecCCHHHHHHHHH--------hCCCCchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 899998 57 899999984 567676654 23445566676666666663100 1223344556666666666
Q ss_pred HchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-------CCEEEEeCCCCCCHHHHHHHH
Q psy14484 346 TSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-------GNTVYLMPPYILNKNEIQHMT 418 (430)
Q Consensus 346 ~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-------~~~lR~~~~~~~t~e~i~~~~ 418 (430)
+.+ +.+...++.|.++++.+. .+ ...+++.|+++||.+.++ ++++|++++ ++++.+.++
T Consensus 281 ~~~---~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~---~~~~~~~l~ 346 (356)
T PRK08056 281 CAL---PLLTVWPGRANYLFLRCE-RP-------DIDLQRALLTQRILIRSCANYPGLDSRYYRVAIR---SAAENERLL 346 (356)
T ss_pred hcC---CCcEEcCCCCcEEEEEcC-CC-------hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEEc---CHHHHHHHH
Confidence 554 333333456777776654 31 256889999999999875 258999865 789999999
Q ss_pred HHHHHHHH
Q psy14484 419 SAIFQTFN 426 (430)
Q Consensus 419 ~~l~~~l~ 426 (430)
++|+++++
T Consensus 347 ~~l~~~~~ 354 (356)
T PRK08056 347 AALRNVLT 354 (356)
T ss_pred HHHHHHHc
Confidence 99987653
No 130
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=3.9e-24 Score=206.28 Aligned_cols=320 Identities=12% Similarity=0.108 Sum_probs=213.2
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVAL 111 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al 111 (430)
.+..++|+..| .+++| .+|.+.+++.+. .... .|+.....++++.+++.++.++++|++++|+++++..++
T Consensus 50 ~~~~~i~l~~n--~~p~~-~~~~v~~a~~~~-~~~~-----~Yp~~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~ 120 (380)
T PLN03026 50 KPEDIVKLDAN--ENPYG-PPPEVLEALGNM-KFPY-----VYPDPESRRLRAALAEDSGLESENILVGCGADELIDLLM 120 (380)
T ss_pred CccceEEccCC--CCCCC-CCHHHHHHHHhh-Hhhc-----cCCCCCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHHH
Confidence 35688998887 56676 568888887652 1111 233334568888899988888899999999999999998
Q ss_pred HHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHH
Q psy14484 112 KMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDL 191 (430)
Q Consensus 112 ~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 191 (430)
++... +++.|++.+|+|..+.......+ .....++.+..+.. |+++|
T Consensus 121 ~~~~~--------~gd~Vlv~~P~y~~y~~~~~~~g-------------~~~~~v~~~~~~~~------------d~~~l 167 (380)
T PLN03026 121 RCVLD--------PGDKIIDCPPTFGMYVFDAAVNG-------------AEVIKVPRTPDFSL------------DVPRI 167 (380)
T ss_pred HHhcC--------CCCEEEEcCCChHHHHHHHHHcC-------------CEEEEeecCCCCCc------------CHHHH
Confidence 87654 56789999999975533222211 12233333222222 78889
Q ss_pred HHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCc---eee
Q psy14484 192 EILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD---FLC 268 (430)
Q Consensus 192 e~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d---~~~ 268 (430)
++.+.. .+++++++.. ++|++|...+ .+++.++++.. +++|+||+|..|...+.... .....+. +-+
T Consensus 168 ~~~~~~--~~~~~v~l~~-P~NPTG~~~~----~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~~--~~~~~~~viv~~S 237 (380)
T PLN03026 168 VEAVET--HKPKLLFLTS-PNNPDGSIIS----DDDLLKILELP-ILVVLDEAYIEFSTQESRMK--WVKKYDNLIVLRT 237 (380)
T ss_pred HHHHhc--cCCcEEEEeC-CCCCCCCCCC----HHHHHHHHhcC-CEEEEECcchhhcCCcchHH--HHHhCCCEEEEec
Confidence 888842 4577777777 8899997766 55556666544 89999999987754332211 1111223 237
Q ss_pred eecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHH
Q psy14484 269 LSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKALT 346 (430)
Q Consensus 269 ~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-~~~~~~~~~~~~~~l~~~l~ 346 (430)
|||.++ .| +|+|++++++++++.+.. ....++.+.+++.++.++|+..+ -++..+.+++..+++.+.|+
T Consensus 238 fSK~~glaG-lRiGy~~~~~~~i~~l~~--------~~~~~~~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~ 308 (380)
T PLN03026 238 FSKRAGLAG-LRVGYGAFPLSIIEYLWR--------AKQPYNVSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLK 308 (380)
T ss_pred chHhhcCcc-ccceeeecCHHHHHHHHH--------hcCCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999987 56 899999999999888765 22345667788888877774211 12334455666666666666
Q ss_pred chhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-----CCEEEEeCCCCCCHHHHHHHHHHH
Q psy14484 347 SLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----GNTVYLMPPYILNKNEIQHMTSAI 421 (430)
Q Consensus 347 ~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-----~~~lR~~~~~~~t~e~i~~~~~~l 421 (430)
.+ +.....+..|.|+++.+. .+. . +.++++.|.++||.+.++ .+++||++. ++++++.++++|
T Consensus 309 ~~---~~~~~~p~~~~f~~~~~~-~~~--~---~~~~~~~l~~~gI~v~~~~~~~~~~~lRis~~---~~~~~~~l~~al 376 (380)
T PLN03026 309 EV---PFLEPYPSDANFILCRVT-SGR--D---AKKLKEDLAKMGVMVRHYNSKELKGYIRVSVG---KPEHTDALMEAL 376 (380)
T ss_pred HC---CCCeECCCCCeEEEEECC-CCC--C---HHHHHHHHHHCCeEEEECCCCCCCCEEEEecC---CHHHHHHHHHHH
Confidence 54 332223456777777665 321 1 357899999999999875 268999866 788899999888
Q ss_pred HHH
Q psy14484 422 FQT 424 (430)
Q Consensus 422 ~~~ 424 (430)
++.
T Consensus 377 ~~~ 379 (380)
T PLN03026 377 KQL 379 (380)
T ss_pred HHh
Confidence 753
No 131
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.94 E-value=9.7e-24 Score=204.69 Aligned_cols=338 Identities=11% Similarity=0.056 Sum_probs=211.3
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhccc--cccCCCCCHHHHHHHHHHHhhcC--CCCC-eEEEcCCchHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEH--VMLSNLTHKPVIKLSEKLSSLTQ--YKLG-HCFYGSDGASA 106 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~--~~~~-~v~~~~sgteA 106 (430)
+|+.++||..| ...++ .+|.+.+++.+.+..... +....+..++++.+++++.+..+ .+++ +|++|+|+++|
T Consensus 28 ~~~~~i~l~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~a 104 (388)
T PRK07366 28 AGKELIDLSLG--SSDLP-APAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEG 104 (388)
T ss_pred cCCCeEEeCCC--CCCCC-CCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHH
Confidence 57788998877 44454 478899999887653211 11122334566667776665543 5677 69999999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 186 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (430)
+..++++++. +++.|++.+|+|.++.......+. .+..++....... ..
T Consensus 105 l~~~~~~l~~--------~gd~Vlv~~P~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~----------~~ 153 (388)
T PRK07366 105 TAHLPLAVLN--------PGDFALLLDPGYPSHAGGVYLAGG-------------QIYPMPLRAENDF----------LP 153 (388)
T ss_pred HHHHHHHhCC--------CCCEEEEcCCCCcchHHHHHhcCC-------------EEEEEECCCccCC----------CC
Confidence 9999988765 678899999999987544433222 2223333211000 01
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccc-c-ccccCCC-C
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-F-ACEHAEI-W 263 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~-~-~~~~~~~-~ 263 (430)
|++++++.+. .+++++++.+ ++|++| ...+.+.+++|.++|++||+++|+||+|..+...+.. . ....... .
T Consensus 154 d~~~l~~~~~---~~~k~i~l~~-p~NPTG-~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~ 228 (388)
T PRK07366 154 VFADIPTEVL---AQARLMVLSY-PHNPTT-AIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEK 228 (388)
T ss_pred CHHHHHHhhc---ccceEEEEeC-CCCCCC-ccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCc
Confidence 6677766664 3466777777 889999 5667888999999999999999999999987544321 1 1111111 1
Q ss_pred Cc---eeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--hcCHHHHHHHH
Q psy14484 264 PD---FLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQD 337 (430)
Q Consensus 264 ~d---~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~ 337 (430)
+. +-+|||.++ .| +|+|++++++++++.+.. ......++.....+.++.+++...+ -+...+.++++
T Consensus 229 ~~vi~~~SfSK~~g~~G-lRiG~~v~~~~li~~l~~------~~~~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~ 301 (388)
T PRK07366 229 SVSIEFFTLSKSYNMGG-FRIGFAIGNAQLIQALRQ------VKAVVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQR 301 (388)
T ss_pred ccEEEEeecccccCCcc-hhheehcCCHHHHHHHHH------HHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 22 238999996 57 899999999999887765 1111222222323344444442100 12234445555
Q ss_pred HHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHH-HHCCcEEeec-------CCEEEEeCCCCC
Q psy14484 338 MKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAA-LKNELLLRPI-------GNTVYLMPPYIL 409 (430)
Q Consensus 338 ~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l-~~~Gv~~~~~-------~~~lR~~~~~~~ 409 (430)
.+.+.+.|+++ +.....+..|.++++.+. ...... +.++++.+ .++||.+.|+ .+++|++++ .
T Consensus 302 r~~l~~~L~~~---~~~~~~p~~g~f~~~~~~-~~~~~~---~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~ 372 (388)
T PRK07366 302 RDAFINALHQI---GWPVPLPEATMYVWAKLP-EPWQGN---SVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALV--H 372 (388)
T ss_pred HHHHHHHHHHC---CCcccCCCeeEEEEEECC-cccCCC---HHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEec--C
Confidence 55565655543 221122344666667665 321101 25677776 4679999985 268899765 5
Q ss_pred CHHHHHHHHHHHHHH
Q psy14484 410 NKNEIQHMTSAIFQT 424 (430)
Q Consensus 410 t~e~i~~~~~~l~~~ 424 (430)
+++++++++++|.+.
T Consensus 373 ~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 373 DPDILEEAVERIAAF 387 (388)
T ss_pred CHHHHHHHHHHHHHh
Confidence 799999999999875
No 132
>PRK09148 aminotransferase; Validated
Probab=99.94 E-value=1e-23 Score=205.23 Aligned_cols=341 Identities=11% Similarity=0.035 Sum_probs=216.5
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhcc--ccccCCCCCHHHHHHHHHHHhhcC--CCCC-eEEEcCCchHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLE--HVMLSNLTHKPVIKLSEKLSSLTQ--YKLG-HCFYGSDGASA 106 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~--~~~~-~v~~~~sgteA 106 (430)
.|..++||..| ...++. ++.+.+++.+.+.... .+....+..++++.+++.+.+.++ .+++ +|++|+|++++
T Consensus 28 ~~~~~i~l~~~--~p~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~a 104 (405)
T PRK09148 28 AGADIIDLGMG--NPDLPT-PQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEG 104 (405)
T ss_pred cCCCeEEcCCC--CCCCCC-CHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHH
Confidence 57788998776 344543 6788888887664311 111122334566777777765543 4566 79999999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 186 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (430)
+..++++++. +++.|++.+|+|.++.......+ ..+..++...+ ..
T Consensus 105 l~~~~~~l~~--------~gd~Vl~~~P~y~~~~~~~~~~g-------------~~v~~v~~~~~--~~----------- 150 (405)
T PRK09148 105 FANMAQAITA--------PGDVILCPNPSYPIHAFGFIMAG-------------GVIRSVPAEPD--EE----------- 150 (405)
T ss_pred HHHHHHHhcC--------CCCEEEEcCCCCcccHHHHHhcC-------------CEEEEEeCCCC--CC-----------
Confidence 9999988865 67889999999998744332211 12223332211 00
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccc--cccCC---
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA--CEHAE--- 261 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~--~~~~~--- 261 (430)
+++++++.++.+..++.++++.. ++|++| ...+.+.+++|.++|++||+++|+||+|..+...+.... ....+
T Consensus 151 ~~~~l~~~~~~~~~~~~~v~l~~-P~NPtG-~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~ 228 (405)
T PRK09148 151 FFPALERAVRHSIPKPIALIVNY-PSNPTA-YVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKD 228 (405)
T ss_pred CccCHHHHHhhccccceEEEEeC-CCCCCC-cCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccC
Confidence 23445555554434566666666 678888 666788899999999999999999999997754332211 11111
Q ss_pred CCCceeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--hcCHHHHHHHHH
Q psy14484 262 IWPDFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQDM 338 (430)
Q Consensus 262 ~~~d~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~~ 338 (430)
....+-+|||.++ .| +|+|++++++++++.+.. .....+++.+.+++.++.+.|+..+ -+...+.++++.
T Consensus 229 ~~i~~~SfSK~~~~pG-lR~G~~v~~~~~i~~l~~------~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r 301 (405)
T PRK09148 229 VTVEFTSMSKTFSMAG-WRMGFAVGNERLIAALTR------VKSYLDYGAFTPIQVAATAALNGPQDCIAEMRELYKKRR 301 (405)
T ss_pred cEEEEeccccccCCcc-hheeeeeCCHHHHHHHHH------HHHHhccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 1112347999998 57 899999999999888765 2222345566777777776664111 022334455555
Q ss_pred HHHHHHHHchhcCCCeeeEee-cceEEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec-------CCEEEEeCCCCC
Q psy14484 339 KKITKALTSLITHPKIINFRQ-KGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------GNTVYLMPPYIL 409 (430)
Q Consensus 339 ~~l~~~l~~l~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~-------~~~lR~~~~~~~ 409 (430)
+.+.+.|+++ +. ....+ .|.++++.++ ....... ..++++.|+ ++||.+.|+ .+++|+++. .
T Consensus 302 ~~l~~~L~~~---~~-~~~~p~~g~f~~~~l~-~~~~~~~--~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~--~ 372 (405)
T PRK09148 302 DVLVESFGRA---GW-DIPPPAASMFAWAPIP-EAFRHLG--SLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALV--E 372 (405)
T ss_pred HHHHHHHHHc---CC-ccCCCCeeEEEEEECC-CccCCCC--HHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec--C
Confidence 5566655543 22 22223 4556666665 3211011 256777765 689999985 258999765 6
Q ss_pred CHHHHHHHHHHHHHHHHH
Q psy14484 410 NKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 410 t~e~i~~~~~~l~~~l~~ 427 (430)
+++.+.+++++|.+++.+
T Consensus 373 ~~~~l~~al~~l~~~l~~ 390 (405)
T PRK09148 373 NEQRIRQAARNIKRFLSS 390 (405)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 889999999999988764
No 133
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.94 E-value=2.1e-23 Score=202.19 Aligned_cols=337 Identities=15% Similarity=0.112 Sum_probs=220.4
Q ss_pred EEEecccccccccCCCCCHHHHHHHHHHHhhccc--cccCCCCCHHHHHHHHHHHhhcCCC---CCeEEEcCCchHHHHH
Q psy14484 35 RYLDAISSWWVNLFGHSNSYINKALKNQLNKLEH--VMLSNLTHKPVIKLSEKLSSLTQYK---LGHCFYGSDGASAVEV 109 (430)
Q Consensus 35 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~---~~~v~~~~sgteA~~~ 109 (430)
.++|+..| ...+. .++.+.+|+.+.+..... +....+..+..+.+++.+++.++.. .+++++++|+++++..
T Consensus 28 ~~~~l~~g--~~~~~-~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~ 104 (389)
T PRK05957 28 GTISLGQG--VVSYP-PPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMN 104 (389)
T ss_pred CeEEccCC--CCCCC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHH
Confidence 35676665 33344 567888999887654321 1222344567788888998887643 5689999999999998
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHH
Q psy14484 110 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIF 189 (430)
Q Consensus 110 al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 189 (430)
++..++. +++.|++.+|+|..+...... . ......++.+.++.. |++
T Consensus 105 ~~~~~~~--------~gd~Vlv~~P~y~~~~~~~~~-~------------g~~~~~v~~~~~~~~------------d~~ 151 (389)
T PRK05957 105 AILAITD--------PGDEIILNTPYYFNHEMAITM-A------------GCQPILVPTDDNYQL------------QPE 151 (389)
T ss_pred HHHHhcC--------CCCEEEEeCCCCcCHHHHHHh-c------------CCEEEEeecCCCCCc------------CHH
Confidence 8887654 567899999999766432221 1 122233443322222 889
Q ss_pred HHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccc-cc-cccCCCC---C
Q psy14484 190 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FA-CEHAEIW---P 264 (430)
Q Consensus 190 ~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~-~~-~~~~~~~---~ 264 (430)
++++.++ ++++++++.. ++|++| ...+.+.+++|.++|+++|+++|+||+|..+...+.. .. ....+.. .
T Consensus 152 ~l~~~i~---~~~klv~~~~-p~NPtG-~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i 226 (389)
T PRK05957 152 AIEQAIT---PKTRAIVTIS-PNNPTG-VVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTI 226 (389)
T ss_pred HHHHhcC---cCceEEEEeC-CCCCCC-cCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEE
Confidence 9998885 4677777777 888899 5556777999999999999999999999977544321 11 1111222 2
Q ss_pred ceeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--hcCHHHHHHHHHHHH
Q psy14484 265 DFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQDMKKI 341 (430)
Q Consensus 265 d~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~~~~l 341 (430)
.+.+|||.++ .| +|+|++++++++++.+.. .......+.+.+++.++..+|+.-. -++..+.++++.+.+
T Consensus 227 ~~~S~SK~~g~~G-lRiG~~~~~~~~~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l 299 (389)
T PRK05957 227 SLYSLSKAYGFAS-WRIGYMVIPIHLLEAIKK------IQDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQIL 299 (389)
T ss_pred EEecchhhccCcc-ceeEEEecCHHHHHHHHH------HHhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 2447999997 46 899999999999888775 1222233445566666666664210 122334456666666
Q ss_pred HHHHHchhcCCCe-eeEeec-ceEEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec-------CCEEEEeCCCCCCH
Q psy14484 342 TKALTSLITHPKI-INFRQK-GMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------GNTVYLMPPYILNK 411 (430)
Q Consensus 342 ~~~l~~l~~~~~~-~~~~~~-g~~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~-------~~~lR~~~~~~~t~ 411 (430)
.+.|+.+ +.+ ...++. |.++++.+. .+.. +.++++.|. ++||.+.|+ ++++|++++. .++
T Consensus 300 ~~~L~~~---~~~~~~~~~~gg~~~~~~~~-~~~~-----~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~ 369 (389)
T PRK05957 300 LKSLGQL---QDRCTLHPANGAFYCFLKVN-TDLN-----DFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGA-LQK 369 (389)
T ss_pred HHHHHhc---CCCccccCCCeeEEEEEeCC-CCCC-----hHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEec-CCH
Confidence 6666654 221 222344 445555554 3211 357888886 579999985 2479998753 578
Q ss_pred HHHHHHHHHHHHHHHHhh
Q psy14484 412 NEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 412 e~i~~~~~~l~~~l~~~~ 429 (430)
+++++.+++|.+.+.+++
T Consensus 370 ~~l~~~~~~l~~~~~~~~ 387 (389)
T PRK05957 370 ATAKEGIERLVQGLKTIV 387 (389)
T ss_pred HHHHHHHHHHHHHHHhhh
Confidence 999999999999988764
No 134
>PRK08960 hypothetical protein; Provisional
Probab=99.93 E-value=4.6e-23 Score=199.82 Aligned_cols=335 Identities=14% Similarity=0.047 Sum_probs=213.2
Q ss_pred CCEEEecccccccccCCCCCHHHHHHHHHHHhhcc-ccccCCCCCHHHHHHHHHHHhhc--CCCCCeEEEcCCchHHHHH
Q psy14484 33 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLE-HVMLSNLTHKPVIKLSEKLSSLT--QYKLGHCFYGSDGASAVEV 109 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~v~~~~sgteA~~~ 109 (430)
|..++++..|. ..++ .++.+.+++.+.+.... .+....+..++++.+++.+.+.. +.++++|++|+|+++|+..
T Consensus 31 ~~~~i~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~ 107 (387)
T PRK08960 31 GHDVIHLEIGE--PDFT-TAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLL 107 (387)
T ss_pred CCCeEEeCCCC--CCCC-CCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHH
Confidence 45678877763 3333 47889999988876421 11122233455566666665543 3577899999999999999
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHH
Q psy14484 110 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIF 189 (430)
Q Consensus 110 al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 189 (430)
++.+... +++.|++.+|+|..+........ .....++.+...... .|++
T Consensus 108 ~~~~~~~--------~gd~vlv~~p~y~~~~~~~~~~g-------------~~~~~v~~~~~~~~~----------~d~~ 156 (387)
T PRK08960 108 ASSLLVD--------PGKHWLLADPGYPCNRHFLRLVE-------------GAAQLVPVGPDSRYQ----------LTPA 156 (387)
T ss_pred HHHHhcC--------CCCEEEEcCCCCcchHHHHHhcC-------------CeEEEEecCcccCCC----------CCHH
Confidence 9987754 67889999999988754333221 122334433211100 1788
Q ss_pred HHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCcee--
Q psy14484 190 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL-- 267 (430)
Q Consensus 190 ~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~-- 267 (430)
++++.++ +++.++++.. ++|++| ...+.+.+++|.++|++||+++|+||+|.++...+... ......++++
T Consensus 157 ~l~~~~~---~~~~~i~i~~-p~NPtG-~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~--~~~~~~~~vi~~ 229 (387)
T PRK08960 157 LVERHWN---ADTVGALVAS-PANPTG-TLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAA--SVLEVDDDAFVL 229 (387)
T ss_pred HHHHHhC---ccceEEEEEC-CCCCCC-cCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCC--ChhhccCCEEEE
Confidence 8888875 3444555555 667888 55677889999999999999999999998774432211 1123334544
Q ss_pred -eeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCH----HHHHHHHHHHH
Q psy14484 268 -CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNI----LQRISQDMKKI 341 (430)
Q Consensus 268 -~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~----~~~~~~~~~~l 341 (430)
+|||.++ .| +|+|++++++++++.+.. .....+.+.+.+.+.++.++++. +..++ .+.+++..+.+
T Consensus 230 ~S~SK~~g~~G-lRiG~~~~~~~~~~~~~~------~~~~~~~~~s~~~q~a~~~~l~~-~~~~~l~~~~~~~~~~~~~l 301 (387)
T PRK08960 230 NSFSKYFGMTG-WRLGWLVAPPAAVPELEK------LAQNLYISASTPAQHAALACFEP-ETLAILEARRAEFARRRDFL 301 (387)
T ss_pred eecccccCCcc-cEEEEEEcCHHHHHHHHH------HHhhhccCCCHHHHHHHHHHhhc-CcHHHHHHHHHHHHHHHHHH
Confidence 5999997 46 899999999998887764 22233445677777777776642 11122 33344445555
Q ss_pred HHHHHchhcCCCeeeE-eecceEEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec--------CCEEEEeCCCCCCH
Q psy14484 342 TKALTSLITHPKIINF-RQKGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI--------GNTVYLMPPYILNK 411 (430)
Q Consensus 342 ~~~l~~l~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~--------~~~lR~~~~~~~t~ 411 (430)
.+.|++. +..... +..|.++++.+. .... . ...+++.|+ ++||.+.|+ ++++|++++. +.
T Consensus 302 ~~~L~~~---~~~~~~~p~g~~f~~~~~~-~~~~-~---~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~--~~ 371 (387)
T PRK08960 302 LPALREL---GFGIAVEPQGAFYLYADIS-AFGG-D---AFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ--SL 371 (387)
T ss_pred HHHHHhc---CCcCCcCCCeeEEEEEecc-ccCC-C---HHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC--CH
Confidence 5555543 221112 233566666665 3111 1 256887765 579999974 2589998774 68
Q ss_pred HHHHHHHHHHHHHHH
Q psy14484 412 NEIQHMTSAIFQTFN 426 (430)
Q Consensus 412 e~i~~~~~~l~~~l~ 426 (430)
+++.+++++|.+++.
T Consensus 372 ~~l~~al~~l~~~~~ 386 (387)
T PRK08960 372 PRLQEAVERIARGLR 386 (387)
T ss_pred HHHHHHHHHHHHHHh
Confidence 889999999887764
No 135
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.93 E-value=3.6e-23 Score=197.83 Aligned_cols=333 Identities=13% Similarity=0.028 Sum_probs=209.6
Q ss_pred EEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC--CCCC-eEEEcCCchHHHHHHHH
Q psy14484 36 YLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ--YKLG-HCFYGSDGASAVEVALK 112 (430)
Q Consensus 36 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~-~v~~~~sgteA~~~al~ 112 (430)
++||.++. ..++ .+|++.+++.+.......+..+.+..++++.+++.+.+..+ .+++ +|++|+|+++|+..++.
T Consensus 2 ~~~~~~g~--p~~~-~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~ 78 (350)
T TIGR03537 2 LFDFGTGD--PKEP-TPPFIRKALIDAVPEVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPL 78 (350)
T ss_pred eEeccCCC--CCCC-CCHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHH
Confidence 56877774 3344 37889999888765433222223334666777777766544 4566 89999999999999888
Q ss_pred HHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHH
Q psy14484 113 MSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLE 192 (430)
Q Consensus 113 ~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le 192 (430)
+++.. |. +++.|++.+|+|.++.......+. ....++.+..... .-|+++++
T Consensus 79 ~~~~~----g~-~~d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~----------~~d~~~l~ 130 (350)
T TIGR03537 79 VFIDP----EE-DRRRVIFGTPGYPVYERGALFAGG-------------EPTAVKLKKEDGF----------LLRLEKVE 130 (350)
T ss_pred HHcCC----CC-CCceEEEcCCCCcchHHHHHhcCC-------------EEEEcccCcccCC----------ccCHHHHH
Confidence 77641 00 126899999999987554433222 2223333211110 01788898
Q ss_pred HHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCC--Cceeeee
Q psy14484 193 ILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIW--PDFLCLS 270 (430)
Q Consensus 193 ~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~--~d~~~~s 270 (430)
+++. ++++++++.+ ++|++| ...+.+.+++|.++|++||+++|+||+|..+...+........+.. .-+.+||
T Consensus 131 ~~~~---~~~~~i~i~~-p~NPtG-~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~S 205 (350)
T TIGR03537 131 KSIL---EETKIVWINY-PHNPTG-ATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLS 205 (350)
T ss_pred Hhhh---hccEEEEEeC-CCCCcC-cccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecc
Confidence 8886 3567777777 888998 6677888999999999999999999999865322221111111111 1123689
Q ss_pred cccCC-CccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHch
Q psy14484 271 KGITG-GYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKALTSL 348 (430)
Q Consensus 271 K~l~g-G~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~l 348 (430)
|.++. | +|+|++++++++.+.+.. .....+.+.+++++.++.+++..-+ .....+.++++.+.+.+.|+..
T Consensus 206 K~~g~~G-lRiG~~~~~~~~~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~ 278 (350)
T TIGR03537 206 KRSGMTG-YRSGFVAGDEKLISFLRK------LRANFGVASPDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKV 278 (350)
T ss_pred cccCCcc-ccceeeecCHHHHHHHHH------HHHhhccCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 99864 6 899999999988877765 1122233444455565655553100 0123344555555555555543
Q ss_pred hcCCCeeeEeecce-EEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-------CCEEEEeCCCCCCHHHHHHHHHH
Q psy14484 349 ITHPKIINFRQKGM-IWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-------GNTVYLMPPYILNKNEIQHMTSA 420 (430)
Q Consensus 349 ~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-------~~~lR~~~~~~~t~e~i~~~~~~ 420 (430)
. +....+.|. ++++.++ ... . +..+++.|.++||.+.++ .+++|+++. .+++++++++++
T Consensus 279 ---g-~~~~~~~g~~~~~~~~~-~~~--~---~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~~~--~~~~~~~~~l~~ 346 (350)
T TIGR03537 279 ---G-LEYLYPDATFYLWVKVP-SGI--D---AKDYALRLLENGIVVAPGENFGSGEEGYVRVALV--PTLEECEEALRL 346 (350)
T ss_pred ---C-CcccCCCeEEEEEEECC-CCC--C---HHHHHHHHHHCCEEEcCchhhCCCCCCEEEEEec--CCHHHHHHHHHH
Confidence 2 222334444 4556655 321 1 367999999999999874 267899753 688999999998
Q ss_pred HHH
Q psy14484 421 IFQ 423 (430)
Q Consensus 421 l~~ 423 (430)
|++
T Consensus 347 ~~~ 349 (350)
T TIGR03537 347 WER 349 (350)
T ss_pred Hhc
Confidence 875
No 136
>PRK09105 putative aminotransferase; Provisional
Probab=99.93 E-value=1.4e-23 Score=201.58 Aligned_cols=317 Identities=11% Similarity=0.003 Sum_probs=210.4
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKM 113 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~ 113 (430)
+.++++..| .++++ .+|.+.+++.+.+.... .|+.....++++.+++.++.++++|++|+|+++++..++..
T Consensus 43 ~~~i~l~~~--~~~~~-~~~~~~~a~~~~~~~~~-----~Y~~~~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~ 114 (370)
T PRK09105 43 EGAVFLNAN--ECPLG-PSPAARDAAARSAALSG-----RYDLELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLA 114 (370)
T ss_pred CCcEEecCC--CCCCC-CCHHHHHHHHHHHHHhc-----CCCCchHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHH
Confidence 456676666 45565 57899999988765432 23334477888999999888899999999999999999988
Q ss_pred HHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHH
Q psy14484 114 SFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEI 193 (430)
Q Consensus 114 ~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~ 193 (430)
+.. +++.|++.+|+|..+.......+ .+...++.+..+.. |++++++
T Consensus 115 l~~--------~gd~Vli~~P~y~~~~~~~~~~g-------------~~~~~v~~~~~~~~------------d~~~l~~ 161 (370)
T PRK09105 115 FTS--------PTAGLVTADPTYEAGWRAADAQG-------------APVAKVPLRADGAH------------DVKAMLA 161 (370)
T ss_pred HcC--------CCCEEEEeCCChHHHHHHHHHcC-------------CeEEEecCCCCCCC------------CHHHHHh
Confidence 764 56889999999987744333222 22233333222221 6777765
Q ss_pred HHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCcee---eee
Q psy14484 194 LLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL---CLS 270 (430)
Q Consensus 194 ~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~---~~s 270 (430)
.. .+++++++.. ++|++|. ..+.+.++++.+.|+ +++++|+||+|..|.... ...+..+..++++ +||
T Consensus 162 ~~----~~~~~v~l~n-P~NPTG~-~~~~~~l~~l~~~~~-~~~~lIvDEaY~~f~~~~--s~~~~~~~~~~vi~~~SfS 232 (370)
T PRK09105 162 AD----PNAGLIYICN-PNNPTGT-VTPRADIEWLLANKP-AGSVLLVDEAYIHFSDAP--SVVDLVAQRKDLIVLRTFS 232 (370)
T ss_pred cC----CCCCEEEEeC-CCCCCCc-CcCHHHHHHHHHhCC-CCcEEEEECchHHhccCc--chHHHHhhCCCEEEEeccc
Confidence 52 2455555555 6788884 567777888887764 589999999998664321 1112212234433 689
Q ss_pred cccCC-CccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHch
Q psy14484 271 KGITG-GYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKALTSL 348 (430)
Q Consensus 271 K~l~g-G~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~l 348 (430)
|.++. | +|+|++++++++++.+.. . ..+..+.+++.++.++|+..+ .+...+.++++.+++.+.|+++
T Consensus 233 K~~g~~G-lRiG~~v~~~~~i~~l~~--------~-~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~ 302 (370)
T PRK09105 233 KLYGMAG-MRLGLAAARPDLLAKLAR--------F-GHNPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKK 302 (370)
T ss_pred HhhcCCc-cceeeeecCHHHHHHHHh--------c-CCCCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 99974 6 899999999999888775 1 233456667777777665211 1223345556666666666654
Q ss_pred hcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEee----cCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q psy14484 349 ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP----IGNTVYLMPPYILNKNEIQHMTSAIFQT 424 (430)
Q Consensus 349 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~----~~~~lR~~~~~~~t~e~i~~~~~~l~~~ 424 (430)
. +...++.|.++.+.+. .+ ..++++.|.++||.+.. ..+++|++++ +++++++++++|++.
T Consensus 303 -g---~~~~~~~~~f~~~~~~-~~-------~~~l~~~L~~~gI~v~~~~~~~~~~~Ris~~---~~~~~~~l~~al~~~ 367 (370)
T PRK09105 303 -G---YKCTPSQANCFMVDVK-RP-------AKAVADAMAKQGVFIGRSWPIWPNWVRVTVG---SEEEMAAFRSAFAKV 367 (370)
T ss_pred -C---CCcCCCCCcEEEEeCC-CC-------HHHHHHHHHHCCcEEecCCCCCCCeEEEEcC---CHHHHHHHHHHHHHH
Confidence 2 2233466777765443 21 35799999999999842 1478999866 788999999998876
Q ss_pred H
Q psy14484 425 F 425 (430)
Q Consensus 425 l 425 (430)
+
T Consensus 368 ~ 368 (370)
T PRK09105 368 M 368 (370)
T ss_pred h
Confidence 5
No 137
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.93 E-value=3.5e-23 Score=201.29 Aligned_cols=335 Identities=12% Similarity=0.057 Sum_probs=213.1
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC---CCCC-eEEEcCCchHHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ---YKLG-HCFYGSDGASAV 107 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~-~v~~~~sgteA~ 107 (430)
.|+.++||..|. ..++ .++.+.+++.+.+.....+....+..++++.+++.+.+.++ .+++ +|++|+|+++|+
T Consensus 27 ~~~~~i~l~~~~--p~~~-~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al 103 (396)
T PRK09147 27 ADLPPISLSIGE--PKHP-TPAFIKDALAANLDGLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREAL 103 (396)
T ss_pred cCCCeEecCCCC--CCCC-CCHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHH
Confidence 578999988873 4454 46788888887765433222223345667778887776655 4554 899999999999
Q ss_pred HHHHHHHHHhhhhcCCCC---CcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHH
Q psy14484 108 EVALKMSFHYWYNKGFLN---KKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA 184 (430)
Q Consensus 108 ~~al~~~~~~~~~~g~~~---~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (430)
..+++++.. + ++.|++.+|+|.++.......+ .+...++.......
T Consensus 104 ~~~~~~l~~--------~~~~gd~vlv~~P~y~~~~~~~~~~g-------------~~~~~vp~~~~~~~---------- 152 (396)
T PRK09147 104 FAFAQTVID--------RDGPGPLVVCPNPFYQIYEGAALLAG-------------AEPYFLNCDPANNF---------- 152 (396)
T ss_pred HHHHHHHcC--------CCCCCCEEEEcCCCccchHHHHHhcC-------------CEEEEeccCccccC----------
Confidence 999998875 4 6789999999987744333222 12233433211100
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc--ccc-cc---
Q psy14484 185 RCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK--FFA-CE--- 258 (430)
Q Consensus 185 ~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~--~~~-~~--- 258 (430)
.-|++++++.+. .+++++++.. ++|++| ...+++.+++|.++|++|++++|+||+|..+...+. ... ..
T Consensus 153 ~~d~~~l~~~~~---~~~k~i~l~n-P~NPTG-~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 227 (396)
T PRK09147 153 APDFDAVPAEVW---ARTQLLFVCS-PGNPTG-AVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAA 227 (396)
T ss_pred ccCHHHHHHHHh---hccEEEEEcC-CCCCcC-ccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhcc
Confidence 017888887775 3566666666 788888 567888999999999999999999999997744331 111 11
Q ss_pred cCCC--CCc---eeeeecccCC-CccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-hcCHH
Q psy14484 259 HAEI--WPD---FLCLSKGITG-GYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNIL 331 (430)
Q Consensus 259 ~~~~--~~d---~~~~sK~l~g-G~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-~~~~~ 331 (430)
..+. .+. +-+|||.++. | +|+|++++++++++.+.. .....+++.+++.+.++.+++..-+ -....
T Consensus 228 ~~~~~~~~~vi~~~S~SK~~~~~G-lRiG~~~~~~~l~~~~~~------~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~ 300 (396)
T PRK09147 228 ELGRDDFKRLVVFHSLSKRSNVPG-LRSGFVAGDAALLKKFLL------YRTYHGCAMPPAVQAASIAAWNDEAHVRENR 300 (396)
T ss_pred ccCccccccEEEEeccccccCCcc-ceeeeecCCHHHHHHHHH------HhhhcccCCCHHHHHHHHHHhcchhHHHHHH
Confidence 1111 122 3379997654 5 899999999999887764 1122345567777777666653100 01123
Q ss_pred HHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec-------------
Q psy14484 332 QRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI------------- 397 (430)
Q Consensus 332 ~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~------------- 397 (430)
+.+++..+.+.+.|+.. ... ..+..|.++++.+. .+ ...+++.|+ ++||.+.|+
T Consensus 301 ~~~~~~~~~~~~~L~~~--~~~--~~p~~g~f~~~~~~-~~-------~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~ 368 (396)
T PRK09147 301 ALYREKFDAVTPILAPV--LDV--QLPDAGFYLWAKVP-GD-------DTEFARRLYADYNVTVLPGSYLAREAHGVNPG 368 (396)
T ss_pred HHHHHHHHHHHHHHHHh--cCC--CCCCeeEEEEEECC-CC-------HHHHHHHHHHhCCEEEeCCccccccccCCCCC
Confidence 33444444444444432 111 12334566666553 21 256777775 679998764
Q ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 398 GNTVYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 398 ~~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
.+++|++++ .+++++++++++|++++.
T Consensus 369 ~~~iRi~~~--~~~~~l~~~l~rl~~~~~ 395 (396)
T PRK09147 369 AGRVRIALV--APLAECVEAAERIVDFCR 395 (396)
T ss_pred CCeEEEEec--CCHHHHHHHHHHHHHHhc
Confidence 256888655 568899999999988763
No 138
>PRK12414 putative aminotransferase; Provisional
Probab=99.93 E-value=3.9e-23 Score=199.94 Aligned_cols=332 Identities=10% Similarity=0.072 Sum_probs=216.0
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhcc-ccccCCCCCHHHHHHHHHHHhhcCCC--C-CeEEEcCCchHHHHH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLE-HVMLSNLTHKPVIKLSEKLSSLTQYK--L-GHCFYGSDGASAVEV 109 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~--~-~~v~~~~sgteA~~~ 109 (430)
..++||..|. ..++ .+|.+.+++.+.+.... .+....+..++++++++.+++.++.. + +++++|+|+++|+..
T Consensus 29 ~~~i~l~~g~--p~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~ 105 (384)
T PRK12414 29 HDALNLSQGA--PNFA-PDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYA 105 (384)
T ss_pred CCeEEcCCCC--CCCC-CCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHH
Confidence 4578888774 3454 47888999888765421 12222344567788888888877643 3 579999999999999
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC-CCCCCCCCChhHHHHHHH
Q psy14484 110 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD-SRNINKGNSANEIARCAI 188 (430)
Q Consensus 110 al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~ 188 (430)
+++.+.. +++.|++.+++|..+.......+ .....++... .+.. |+
T Consensus 106 ~~~~l~~--------~gd~Vlv~~p~y~~~~~~~~~~g-------------~~~~~v~~~~~~~~~------------d~ 152 (384)
T PRK12414 106 AISALVH--------PGDEVIYFEPSFDSYAPIVRLQG-------------ATPVAIKLSPEDFRV------------NW 152 (384)
T ss_pred HHHHhcC--------CCCEEEEeCCCccchHHHHHHcC-------------CEEEEEecCcccccc------------CH
Confidence 9987764 66889999999977643322211 1222333221 1111 78
Q ss_pred HHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccc-cc-ccCCCCCc-
Q psy14484 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-AC-EHAEIWPD- 265 (430)
Q Consensus 189 ~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~-~~-~~~~~~~d- 265 (430)
++|++.++ ++++++++.. ++|++|. ..+++.+++|.++|++||+++|+||+|..+...+... .+ ...+....
T Consensus 153 ~~l~~~l~---~~~~~v~i~~-p~NPTG~-~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~ 227 (384)
T PRK12414 153 DEVAAAIT---PRTRMIIVNT-PHNPSAT-VFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERS 227 (384)
T ss_pred HHHHhhcC---cccEEEEEcC-CCCCCCc-CCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcE
Confidence 88888885 4567777777 8888984 5667889999999999999999999998765444211 11 11122222
Q ss_pred --eeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHH
Q psy14484 266 --FLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKI 341 (430)
Q Consensus 266 --~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-~~~~~~~~~~~~~~l 341 (430)
+.+|||.++ .| +|+|++++++++++.+.. .....+++.+.+++.++.+.|+.-. .....+.++++.+.+
T Consensus 228 i~~~SfSK~~~~pG-lRiG~~v~~~~l~~~l~~------~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l 300 (384)
T PRK12414 228 VIVSSFGKSYHVTG-WRVGYCLAPAELMDEIRK------VHQFMVFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLL 300 (384)
T ss_pred EEEecccccccCcc-ceEEEEecCHHHHHHHHH------HHhheecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Confidence 337999996 57 899999999999887765 2233456677777777776664100 112344556666666
Q ss_pred HHHHHchhcCCCeeeEeecceEEEE-EEeecCCccchhHHHHHH-HHHHHCCcEEeec---------CCEEEEeCCCCCC
Q psy14484 342 TKALTSLITHPKIINFRQKGMIWAF-DVIIEDPEQIETFSKKFF-VAALKNELLLRPI---------GNTVYLMPPYILN 410 (430)
Q Consensus 342 ~~~l~~l~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~a~~~~-~~l~~~Gv~~~~~---------~~~lR~~~~~~~t 410 (430)
.+.|++. + +...++.|.|+.+ .+. ...... ..+++ +.|.++||.+.|+ .+++|++++ .+
T Consensus 301 ~~~L~~~---g-~~~~~~~gg~~~~~~~~-~~~~~~---~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~--~~ 370 (384)
T PRK12414 301 ARELAGS---R-FELLPSEGSFFMLARFR-HFSDES---DSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFS--KD 370 (384)
T ss_pred HHHHHhC---C-CeecCCCcceEEEEccc-ccCCCC---HHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEec--CC
Confidence 6666553 2 2233455655554 444 211101 13455 5567889999884 247999766 47
Q ss_pred HHHHHHHHHHHHH
Q psy14484 411 KNEIQHMTSAIFQ 423 (430)
Q Consensus 411 ~e~i~~~~~~l~~ 423 (430)
++++++++++|.+
T Consensus 371 ~~~~~~~~~rl~~ 383 (384)
T PRK12414 371 DATLVEGARRLCS 383 (384)
T ss_pred HHHHHHHHHHHhh
Confidence 8999999999864
No 139
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.93 E-value=6.7e-23 Score=199.76 Aligned_cols=338 Identities=12% Similarity=0.060 Sum_probs=221.0
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhcccccc-C-----CCCCHHHHHHHHHHHhhcCC-CCCeEEEcCCch
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVML-S-----NLTHKPVIKLSEKLSSLTQY-KLGHCFYGSDGA 104 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~-----~~~~~~~~~l~~~l~~~~~~-~~~~v~~~~sgt 104 (430)
++..|+|-.+ .|..++.+.+++.+.+........ . ....+..+++++.+++++++ ++++|++++|++
T Consensus 18 ~~~~yld~a~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t 91 (401)
T PRK10874 18 DAGVYLDSAA------TALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTT 91 (401)
T ss_pred CceEEEeCCc------ccCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHH
Confidence 3567888544 344678999999988865321111 0 01134567888899999987 678999999999
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHH
Q psy14484 105 SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA 184 (430)
Q Consensus 105 eA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (430)
+++..+++.+... ..+++++||+.++.|++....... .......++..++.+.+...
T Consensus 92 ~~i~~~~~~~~~~----~~~~gd~vl~~~~~~~s~~~~~~~---------~~~~~g~~v~~v~~~~~~~~---------- 148 (401)
T PRK10874 92 ESINLVAQSYARP----RLQPGDEIIVSEAEHHANLVPWLM---------VAQQTGAKVVKLPLGADRLP---------- 148 (401)
T ss_pred HHHHHHHHHhhhc----cCCCcCEEEECCcchHHHHHHHHH---------HHHHhCCEEEEEecCCCCcC----------
Confidence 9999998876420 001557899988887753211110 00111233345554432222
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCC
Q psy14484 185 RCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWP 264 (430)
Q Consensus 185 ~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~ 264 (430)
|++++++.++ ++++++++.. +++++|...| +++|.++|+++|+++|+|++|+ ++.. ..+...+.+
T Consensus 149 --d~~~l~~~i~---~~t~lv~i~~-~~n~tG~~~~----~~~i~~l~~~~g~~~ivD~a~~-~g~~----~~~~~~~~~ 213 (401)
T PRK10874 149 --DVDLLPELIT---PRTRILALGQ-MSNVTGGCPD----LARAITLAHQAGMVVMVDGAQG-AVHF----PADVQALDI 213 (401)
T ss_pred --CHHHHHHhcC---cCcEEEEEeC-CcccccCcCC----HHHHHHHHHHcCCEEEEECCcc-cccc----cCCchhcCC
Confidence 7899999885 4678888888 8999998888 9999999999999999999996 3322 122223357
Q ss_pred ceeeee--cccCCCccccEEEEEcHHHHHhhhcc--C-C---------------cccccccCCCCCCHHHHHHHHHHHHH
Q psy14484 265 DFLCLS--KGITGGYLPLSLVMTTDKIYNSIYYK--N-N---------------INIFLHSHSYSGNPLACCAALATLEI 324 (430)
Q Consensus 265 d~~~~s--K~l~gG~~~ig~~~~~~~~~~~~~~~--~-~---------------~~~~~~~~t~~~~~~~~~aa~~~l~~ 324 (430)
|++++| |.++. ..+|++++++++.+.+.+- + . +..+. .+ +.+..+..+..++++.
T Consensus 214 d~~~~s~~K~~gp--~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e-~G--t~~~~~~~al~~al~~ 288 (401)
T PRK10874 214 DFYAFSGHKLYGP--TGIGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFE-AG--TPNVAGVIGLSAALEW 288 (401)
T ss_pred CEEEEecccccCC--CccEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhcc-CC--CcCHHHHHHHHHHHHH
Confidence 887766 96543 3479999999987765420 0 0 00000 01 2344566666666765
Q ss_pred Hhhc---CHHHHHHHHHHHHHHHHHchhcCCCeeeE-eecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec---
Q psy14484 325 FNKD---NILQRISQDMKKITKALTSLITHPKIINF-RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI--- 397 (430)
Q Consensus 325 ~~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~--- 397 (430)
+.+. ...++.+++.+++.+.|+++ +++... ...+.++.+.+. . . . ..++.+.|.++||.+.++
T Consensus 289 l~~~g~~~~~~~~~~l~~~l~~~l~~~---~g~~~~~~~~~~i~~~~~~-~-~---~--~~~~~~~L~~~gI~v~~g~~~ 358 (401)
T PRK10874 289 LADIDINQAESWSRSLATLAEDALAKL---PGFRSFRCQDSSLLAFDFA-G-V---H--HSDLVTLLAEYGIALRAGQHC 358 (401)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHhcC---CCEEEeCCCCCcEEEEEEC-C-c---C--HHHHHHHHHHCCcEEeccccc
Confidence 5433 34566666777777777654 332222 233445666554 2 1 1 256888899999998763
Q ss_pred ----------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 398 ----------GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 398 ----------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.+++|++++..+|++|++.++++|+++++++
T Consensus 359 ~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 359 AQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred hHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHHHHHHh
Confidence 2689999999999999999999999988764
No 140
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.93 E-value=4.5e-23 Score=200.34 Aligned_cols=347 Identities=12% Similarity=0.076 Sum_probs=221.1
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhccc-cccCCCCCHHHHHHHHHHHhhcC---CCCC-eEEEcCCchHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEH-VMLSNLTHKPVIKLSEKLSSLTQ---YKLG-HCFYGSDGASA 106 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~---~~~~-~v~~~~sgteA 106 (430)
.|++++|+..| ...++ .+|.+.+++.+.+..... .+...+...+++.+++++.+..+ .+++ +|++|+|++++
T Consensus 42 ~~~~~i~L~~g--~p~~~-~~~~~~~~l~~~~~~~~~~~Y~~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~a 118 (410)
T PRK06290 42 PDMELIDMGVG--EPDEM-ADESVVEVLCEEAKKPENRGYADNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPA 118 (410)
T ss_pred CCCCeEEcCCC--CCCCC-CCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHH
Confidence 46788998887 45566 467888888876643211 11123334566667777665544 3565 79999999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 186 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (430)
+..++.+... +++.|++..|+|.++...+...+. ++..++....... ..
T Consensus 119 l~~~~~~~~~--------~gd~Vlv~~P~y~~~~~~~~~~g~-------------~v~~v~~~~~~~~----------~~ 167 (410)
T PRK06290 119 LAMLPSCFIN--------PGDVTLMTVPGYPVTGTHTKYYGG-------------EVYNLPLLEENNF----------LP 167 (410)
T ss_pred HHHHHHHhCC--------CCCEEEEeCCCCccHHHHHHHcCC-------------EEEEEecCCCcCC----------cC
Confidence 9999887764 678899999999987544333221 2223333211000 01
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccc-cccCC---C
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA-CEHAE---I 262 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~-~~~~~---~ 262 (430)
|++++++.+. .+++++++.. ++|++| ...+.+.+++|.++|++|+++||+||+|..+...+.... ....+ .
T Consensus 168 d~~~l~~~~~---~~~k~i~l~n-P~NPTG-~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~ 242 (410)
T PRK06290 168 DLDSIPKDIK---EKAKLLYLNY-PNNPTG-AVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEV 242 (410)
T ss_pred CHHHHHHhhc---ccceEEEEEC-CCCCCC-cCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCcccc
Confidence 7788888775 3567777776 788888 666888899999999999999999999997643332111 11111 1
Q ss_pred CCceeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-hcCHHHHHHHHHHH
Q psy14484 263 WPDFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKK 340 (430)
Q Consensus 263 ~~d~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-~~~~~~~~~~~~~~ 340 (430)
..-+-+|||.++ .| +|+|++++++++++.+.. .......+.+.+++.++..+|+..+ .+...+.++++.+.
T Consensus 243 ~I~i~SfSK~~g~~G-lRiG~ii~~~~l~~~l~~------~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~ 315 (410)
T PRK06290 243 GVEIHSLSKAYNMTG-WRLAFVVGNELIVKAFAT------VKDNNDSGQFIAIQKAGIYALDHPEITEKIREKYSRRLDK 315 (410)
T ss_pred EEEEeechhhcCCch-hheEeEEeCHHHHHHHHH------HHhccccCCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Confidence 122347999996 46 899999999999887765 1122233334566666666664211 12334455566666
Q ss_pred HHHHHHchhcCCCeeeEeecceEEE-EEEeecCCccc--hhHHHHHHHHHHHCCc-EEeec---CCEEEEeCCCC-CCHH
Q psy14484 341 ITKALTSLITHPKIINFRQKGMIWA-FDVIIEDPEQI--ETFSKKFFVAALKNEL-LLRPI---GNTVYLMPPYI-LNKN 412 (430)
Q Consensus 341 l~~~l~~l~~~~~~~~~~~~g~~~~-~~~~~~~~~~~--~~~a~~~~~~l~~~Gv-~~~~~---~~~lR~~~~~~-~t~e 412 (430)
+.+.|+++ + +...++.|.++. +.+. ...... ..-+.++++.|+++|+ ++.|+ ++++||+++.. .+++
T Consensus 316 l~~~L~~~---g-~~~~~p~g~f~l~v~lp-~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~~~~~~~ 390 (410)
T PRK06290 316 LVKILNEV---G-FKAEMPGGTFYLYVKAP-KGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTFEAKDEE 390 (410)
T ss_pred HHHHHHhC---C-CeecCCCeeeEEEEECC-CccccCCCCCCHHHHHHHHHHhCCEEEECCccccCeEEEEEEccccccc
Confidence 66666554 2 223345556654 4554 321000 0013679999998865 44454 36899977633 5889
Q ss_pred HHHHHHHHHHHHHHHhh
Q psy14484 413 EIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 413 ~i~~~~~~l~~~l~~~~ 429 (430)
+.++++++|++.|.++.
T Consensus 391 ~~~~~~~~l~~~~~~~~ 407 (410)
T PRK06290 391 EEDRILEEIKRRLSDVE 407 (410)
T ss_pred chhHHHHHHHHHHhhcc
Confidence 99999999999998763
No 141
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.93 E-value=4e-23 Score=199.92 Aligned_cols=332 Identities=17% Similarity=0.167 Sum_probs=213.9
Q ss_pred EEEecccccccccCCCCCHHHHHHHHHHHhh-ccccccCCCCCHHHHHHHHHHHhhc--CCCCCeEEEcCCchHHHHHHH
Q psy14484 35 RYLDAISSWWVNLFGHSNSYINKALKNQLNK-LEHVMLSNLTHKPVIKLSEKLSSLT--QYKLGHCFYGSDGASAVEVAL 111 (430)
Q Consensus 35 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~v~~~~sgteA~~~al 111 (430)
.++||..| ...+. .+|++.+++.+.+.. ...+....+..++++.+++.+.+.. +.++++|++|+|+++|+..++
T Consensus 30 ~~i~l~~g--~p~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~ 106 (384)
T PRK06348 30 DIIDLSLG--DPDLI-TDESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLAL 106 (384)
T ss_pred CcEEcCCC--CCCCC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHH
Confidence 57888877 33444 357777766554432 1112222233355666777665543 357789999999999999999
Q ss_pred HHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC-C-CCCCCCCCChhHHHHHHHH
Q psy14484 112 KMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP-D-SRNINKGNSANEIARCAIF 189 (430)
Q Consensus 112 ~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~d~~ 189 (430)
+++.. +++.|++..|+|.++.......+. ....++.. . .+.. |++
T Consensus 107 ~~~~~--------~gd~vlv~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~------------d~~ 153 (384)
T PRK06348 107 QSILD--------PGDEVIIHEPYFTPYKDQIEMVGG-------------KPIILETYEEDGFQI------------NVK 153 (384)
T ss_pred HHhcC--------CCCEEEEeCCCCcchHHHHHHcCC-------------EEEEecCCcCcCCcC------------CHH
Confidence 98864 667899999999887554443222 11222221 1 1111 788
Q ss_pred HHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccccc-ccCCCCCc---
Q psy14484 190 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFAC-EHAEIWPD--- 265 (430)
Q Consensus 190 ~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~-~~~~~~~d--- 265 (430)
+|++.++ ++++++++.. ++|++| ...+.+.+++|.++|+++|+++|+||+|.++...+..... ...+..+.
T Consensus 154 ~l~~~~~---~~~~~v~l~~-p~NPtG-~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~ 228 (384)
T PRK06348 154 KLEALIT---SKTKAIILNS-PNNPTG-AVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTIT 228 (384)
T ss_pred HHHHhhC---cCccEEEEeC-CCCCCC-cCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEE
Confidence 9988885 3556666666 788888 5668888999999999999999999999987543321111 11111222
Q ss_pred eeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--hcCHHHHHHHHHHHHH
Q psy14484 266 FLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQDMKKIT 342 (430)
Q Consensus 266 ~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~~~~l~ 342 (430)
+.+|||.++ .| +|+|++++++++.+.+.. .....+++.+.+++.++..++...+ .+.+.+.++++.+++.
T Consensus 229 ~~SfSK~~~l~G-lRiG~~v~~~~~~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~ 301 (384)
T PRK06348 229 FGSFSKDFAMTG-WRIGYVIAPDYIIETAKI------INEGICFSAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAY 301 (384)
T ss_pred EecchhccCCcc-ccceeeecCHHHHHHHHH------HHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 337999998 57 899999999998877764 2234466778888887777775211 1223444555566666
Q ss_pred HHHHchhcCCCeeeEeecceE-EEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec-------CCEEEEeCCCCCCHHH
Q psy14484 343 KALTSLITHPKIINFRQKGMI-WAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------GNTVYLMPPYILNKNE 413 (430)
Q Consensus 343 ~~l~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~-------~~~lR~~~~~~~t~e~ 413 (430)
+.|+.+ +.+....+.|.+ +++.++ ..... ..++++.|+ +.||.+.|+ .+++|++++ .++++
T Consensus 302 ~~L~~~---~~~~~~~p~gg~~~~~~~~-~~~~~----~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~ 371 (384)
T PRK06348 302 KRIESI---PNLSLHPPKGSIYAFINIK-KTGLS----SVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACT--VGIEV 371 (384)
T ss_pred HHHhcC---CCceeccCCeeEEEEEecc-cCCCC----HHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEec--CCHHH
Confidence 666543 333333455554 455554 22111 256888876 569999875 258999764 58899
Q ss_pred HHHHHHHHHHH
Q psy14484 414 IQHMTSAIFQT 424 (430)
Q Consensus 414 i~~~~~~l~~~ 424 (430)
+++++++|++.
T Consensus 372 l~~al~~l~~~ 382 (384)
T PRK06348 372 LEEAFNRIEKM 382 (384)
T ss_pred HHHHHHHHHhh
Confidence 99999998653
No 142
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.93 E-value=5.5e-23 Score=185.73 Aligned_cols=326 Identities=13% Similarity=0.127 Sum_probs=223.3
Q ss_pred CCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC--CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcE
Q psy14484 51 SNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKK 128 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~ 128 (430)
.+|+|++|++++++.+-.+++ ....+...++.++..+.++ ..++.++|+++.-.++..+++.... +++.
T Consensus 39 ~pp~i~~Al~~rvdhGvfGY~-~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~--------~gd~ 109 (388)
T COG1168 39 TPPEIIEALRERVDHGVFGYP-YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALTK--------PGDG 109 (388)
T ss_pred CCHHHHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhCc--------CCCe
Confidence 589999999999987644333 4444577888888888764 4677899999999999999998876 7789
Q ss_pred EEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCC--CCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEE-E
Q psy14484 129 FICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITT--PDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAA-I 205 (430)
Q Consensus 129 vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~-v 205 (430)
|++.+|.|+...-. ...++... ...|. ++.... .|+++||+.+.+ +++++ +
T Consensus 110 Vvi~tPvY~PF~~~-i~~n~R~~------------i~~pL~~~~~~y~-----------iD~~~LE~~~~~--~~vkl~i 163 (388)
T COG1168 110 VVIQTPVYPPFYNA-IKLNGRKV------------IENPLVEDDGRYE-----------IDFDALEKAFVD--ERVKLFI 163 (388)
T ss_pred eEecCCCchHHHHH-HhhcCcEE------------EeccccccCCcEE-----------ecHHHHHHHHhc--CCccEEE
Confidence 99999999876322 22222111 11111 111111 299999999984 45454 5
Q ss_pred EEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcc-cccccccCC--CCCc---eeeeecccCCCccc
Q psy14484 206 IIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTG-KFFACEHAE--IWPD---FLCLSKGITGGYLP 279 (430)
Q Consensus 206 i~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g-~~~~~~~~~--~~~d---~~~~sK~l~gG~~~ 279 (430)
+|+| +|++| .+++++.|++|.++|.+||+++|.||+|+.+...| +.+.+.... .... +.+-||++.-.++.
T Consensus 164 LCnP--HNP~G-rvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~ 240 (388)
T COG1168 164 LCNP--HNPTG-RVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLK 240 (388)
T ss_pred EeCC--CCCCC-ccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhh
Confidence 5554 66666 89999999999999999999999999999987777 333322111 1111 22346887653378
Q ss_pred cEEEEEc-HHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh--cCHHHHHHHHHHHHHHHHHchhcCCCeee
Q psy14484 280 LSLVMTT-DKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDMKKITKALTSLITHPKIIN 356 (430)
Q Consensus 280 ig~~~~~-~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 356 (430)
++.++.+ +++.+.+.. .+...+....|.+++.|..++.+.-+. +++.+.++.+.+++.+.+++ ..|.+.-
T Consensus 241 ~a~~Ii~n~~lr~~~~~-----~l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~--~~P~v~v 313 (388)
T COG1168 241 CAYIIISNRELRAKFLK-----RLKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNK--HLPGVKV 313 (388)
T ss_pred heeEEecCHHHHHHHHH-----HHHHhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHh--hCCCcEE
Confidence 8877664 565454443 122344556788999999888875432 45567777788788777765 4577777
Q ss_pred EeecceEEEE-EEeecCCccchhHHHHHHHHHHHC-CcEEeec------C-CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 357 FRQKGMIWAF-DVIIEDPEQIETFSKKFFVAALKN-ELLLRPI------G-NTVYLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 357 ~~~~g~~~~~-~~~~~~~~~~~~~a~~~~~~l~~~-Gv~~~~~------~-~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
..++|+++.+ ++. .-.. . .+++.+.|+++ +|.+.++ | +.+|+ ++..+.+-+++++++|+++++.
T Consensus 314 ~~p~gTYL~WLD~r-~l~l-~---d~~l~~~ll~~akVal~~G~~FG~~g~gf~Rl--N~acpr~~L~eal~ri~~al~~ 386 (388)
T COG1168 314 TEPQGTYLAWLDCR-ELGL-D---DSELAEFLLEEAKVALSPGSTFGEEGSGFVRL--NFACPRAILEEALERLKRALKK 386 (388)
T ss_pred ecCCCceeeeeecc-ccCC-C---hHHHHHHHHHhhcEeccCCCccCcCCCceEEE--ecCCCHHHHHHHHHHHHHHHhc
Confidence 7888988765 554 2221 1 14566666655 5555543 3 67777 7889999999999999998875
Q ss_pred h
Q psy14484 428 V 428 (430)
Q Consensus 428 ~ 428 (430)
.
T Consensus 387 ~ 387 (388)
T COG1168 387 R 387 (388)
T ss_pred c
Confidence 3
No 143
>PRK03321 putative aminotransferase; Provisional
Probab=99.93 E-value=5e-24 Score=204.07 Aligned_cols=317 Identities=14% Similarity=0.138 Sum_probs=209.8
Q ss_pred EEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHH
Q psy14484 35 RYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMS 114 (430)
Q Consensus 35 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~ 114 (430)
.++||..+ ...+| .+|.+.+++.+.+.... .++.....++++.+++.+++++++|++++|+++++..++...
T Consensus 23 ~~i~l~~~--~~~~~-~~~~~~~a~~~~~~~~~-----~y~~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~ 94 (352)
T PRK03321 23 GAIKLSSN--ETPFG-PLPSVRAAIARAAAGVN-----RYPDMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQAT 94 (352)
T ss_pred cceeccCC--CCCCC-CCHHHHHHHHHHHHhcC-----cCCCCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHh
Confidence 57888877 34455 46789999988765432 233445677888888888777789999999999988887766
Q ss_pred HHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHH
Q psy14484 115 FHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEIL 194 (430)
Q Consensus 115 ~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~ 194 (430)
.. +++.|++..++|..+...... . ......++.+..... |++++++.
T Consensus 95 ~~--------~gd~Vli~~p~y~~~~~~~~~-~------------g~~~~~v~~~~~~~~------------~~~~l~~~ 141 (352)
T PRK03321 95 AG--------PGDEVIFAWRSFEAYPILVQV-A------------GATPVQVPLTPDHTH------------DLDAMAAA 141 (352)
T ss_pred cC--------CCCEEEeCCCCHHHHHHHHHH-c------------CCEEEEccCCCCCCC------------CHHHHHHh
Confidence 53 567888888887543221111 1 112233333211211 78888888
Q ss_pred HHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHh--cCCEEEEeccccCCCCcccc-cccccCCCCCcee---e
Q psy14484 195 LKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNN--YNIHLIADEIAVGCGRTGKF-FACEHAEIWPDFL---C 268 (430)
Q Consensus 195 l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~--~gi~li~DEv~~g~g~~g~~-~~~~~~~~~~d~~---~ 268 (430)
++ +++++++++. ++|++|.+.+ .+++.++|++ +++++|+||+|.++...+.. .........++++ +
T Consensus 142 ~~---~~~~~v~l~~-p~NPtG~~~~----~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S 213 (352)
T PRK03321 142 IT---DRTRLIFVCN-PNNPTGTVVT----PAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRT 213 (352)
T ss_pred hc---cCCCEEEEeC-CCCCcCCCcC----HHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEec
Confidence 85 3566777777 8888996665 4455555554 69999999999977554321 1122222234544 6
Q ss_pred eecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHH---HHHHHHHHHHH
Q psy14484 269 LSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQR---ISQDMKKITKA 344 (430)
Q Consensus 269 ~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~---~~~~~~~l~~~ 344 (430)
|||.++ .| +|+|++++++++++.+.. ...+++.+.+++.++.++|... +.+.++ +.+..+++.+.
T Consensus 214 ~SK~~g~~G-lRiG~~v~~~~~~~~~~~--------~~~~~~~s~~~q~~a~~~l~~~--~~~~~~~~~~~~~r~~~~~~ 282 (352)
T PRK03321 214 FSKAYGLAG-LRVGYAVGHPEVIAALRK--------VAVPFSVNSLAQAAAIASLAAE--DELLERVDAVVAERDRVRAA 282 (352)
T ss_pred chHHhhhHH-HhhhhhcCCHHHHHHHHH--------hcCCCCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHH
Confidence 899997 57 899999999999988875 2346677888888777777521 223222 23333445455
Q ss_pred HHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-CEEEEeCCCCCCHHHHHHHHHHHHH
Q psy14484 345 LTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQ 423 (430)
Q Consensus 345 l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-~~lR~~~~~~~t~e~i~~~~~~l~~ 423 (430)
|++. +. ...+..|.++++.+. .+ +..+++.|.++||.+.+.+ +.+|++++ +++++++++++|++
T Consensus 283 L~~~---~~-~~~~~~g~~i~i~l~-~~-------~~~~~~~l~~~gI~v~~~~~~~iRi~~~---~~~~~~~~~~al~~ 347 (352)
T PRK03321 283 LRAA---GW-TVPPSQANFVWLPLG-ER-------TADFAAAAAEAGVVVRPFAGEGVRVTIG---APEENDAFLRAARA 347 (352)
T ss_pred HHHC---CC-ccCCCCCCEEEEeCC-CC-------HHHHHHHHHHCCEEEEccCCCcEEEeeC---CHHHHHHHHHHHHH
Confidence 5433 21 222345777777654 31 3578899999999999874 57999854 99999999999998
Q ss_pred HHH
Q psy14484 424 TFN 426 (430)
Q Consensus 424 ~l~ 426 (430)
++.
T Consensus 348 ~~~ 350 (352)
T PRK03321 348 WRA 350 (352)
T ss_pred Hhc
Confidence 764
No 144
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.93 E-value=1.2e-22 Score=197.81 Aligned_cols=338 Identities=11% Similarity=0.062 Sum_probs=219.6
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccc-cCCC-----CCHHHHHHHHHHHhhcCCC-CCeEEEcCCch
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVM-LSNL-----THKPVIKLSEKLSSLTQYK-LGHCFYGSDGA 104 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-~~~~-----~~~~~~~l~~~l~~~~~~~-~~~v~~~~sgt 104 (430)
++.-|+|..+ .|..++.+.+++.+.+....... ...+ ..+..+++++.++++++.. +++|++++|++
T Consensus 15 ~~~iyld~a~------~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t 88 (398)
T TIGR03392 15 DGTVYLDSAA------TALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTT 88 (398)
T ss_pred CCeEEeeCcc------ccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChH
Confidence 3567888554 34467899999988875432111 0011 1234567888999999874 68999999999
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHH
Q psy14484 105 SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA 184 (430)
Q Consensus 105 eA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (430)
+++..++..+... ...++++||+.++.|++....... .......+++.++.+.....
T Consensus 89 ~~l~~~~~~~~~~----~~~~gd~Vl~~~~~~~s~~~~~~~---------~~~~~g~~v~~v~~~~~~~~---------- 145 (398)
T TIGR03392 89 ESINLVAQSYARP----RLQPGDEIIVSEAEHHANLIPWLM---------VAQQTGAKVVKLPIGADLLP---------- 145 (398)
T ss_pred HHHHHHHHHhhhc----cCCCCCEEEECCcchhHHHHHHHH---------HHHHcCcEEEEEecCCCCCc----------
Confidence 9999998876320 001567889888888763211100 00111233345544322221
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCC
Q psy14484 185 RCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWP 264 (430)
Q Consensus 185 ~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~ 264 (430)
|+++++++++ +++++|++.. ++|++|.+.+ +++|.++|+++|+++|+|++|+ ++.. ..+.....+
T Consensus 146 --~~~~l~~~i~---~~t~lv~i~~-~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~~~~----~~~~~~~~~ 210 (398)
T TIGR03392 146 --DIRQLPELLT---PRTRILALGQ-MSNVTGGCPD----LARAITLAHQYGAVVVVDGAQG-VVHG----PPDVQALDI 210 (398)
T ss_pred --CHHHHHHHhc---cCceEEEEEC-ccccccccCC----HHHHHHHHHHcCCEEEEEhhhh-cCCC----CCChhhcCC
Confidence 7889998885 4678888888 9999998888 9999999999999999999996 3322 122223457
Q ss_pred ceeeee--cccCCCccccEEEEEcHHHHHhhhcc--CCc----------------ccccccCCCCCCHHHHHHHHHHHHH
Q psy14484 265 DFLCLS--KGITGGYLPLSLVMTTDKIYNSIYYK--NNI----------------NIFLHSHSYSGNPLACCAALATLEI 324 (430)
Q Consensus 265 d~~~~s--K~l~gG~~~ig~~~~~~~~~~~~~~~--~~~----------------~~~~~~~t~~~~~~~~~aa~~~l~~ 324 (430)
|+.++| |.++. .++|++++++++.+.+.+. +.. ..+. .+ +.+..+..+..++++.
T Consensus 211 d~~~~s~~K~~gp--~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e-~G--T~~~~~~~a~~~al~~ 285 (398)
T TIGR03392 211 DFYAFSGHKLYGP--TGIGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFE-AG--TPNIAGVIGLSAALEW 285 (398)
T ss_pred CEEEEecccccCC--CceEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhcc-CC--CCCHHHHHHHHHHHHH
Confidence 888888 96543 3589999999887665431 000 0010 11 2344566666667776
Q ss_pred Hhhc---CHHHHHHHHHHHHHHHHHchhcCCCeeeE-eecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec---
Q psy14484 325 FNKD---NILQRISQDMKKITKALTSLITHPKIINF-RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI--- 397 (430)
Q Consensus 325 ~~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~--- 397 (430)
+++. +..++.+++.+++.+.|+++ +.+.-. .....++.+.+. . . . ...+.+.|.++||.+.++
T Consensus 286 l~~~g~~~i~~~~~~l~~~l~~~l~~l---~g~~~~~~~~~~i~~~~~~-~-~---~--~~~l~~~L~~~gI~v~~g~~~ 355 (398)
T TIGR03392 286 LTDIDIAAAEAWSVSLADLAEERLAQL---PGFRSFRCPGSSLLAFDFA-G-V---H--HSDLAALLAESGIALRAGQHC 355 (398)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHhcC---CCeEEeCCCCCcEEEEEeC-C-c---C--HHHHHHHHHhCCEEEecCccc
Confidence 5443 34566666777777777655 332211 123445555544 2 1 1 256888899999998753
Q ss_pred ----------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 398 ----------GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 398 ----------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
++++|++++..+|++|++.+++.|++++.++
T Consensus 356 ~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 356 AQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred hHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHHHHHh
Confidence 2589999999999999999999999988764
No 145
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.93 E-value=2.2e-23 Score=208.72 Aligned_cols=341 Identities=13% Similarity=0.127 Sum_probs=213.9
Q ss_pred CCCEEEecccccccccCCC-CCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhc--CCCCCeEEEcCCchHHHH
Q psy14484 32 SGKRYLDAISSWWVNLFGH-SNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLT--QYKLGHCFYGSDGASAVE 108 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~v~~~~sgteA~~ 108 (430)
.|+.+++|..|.. +++|+ .++++++++.+.+.....+..+.+..++++.+++.+.+.. +.++++|++++|+++++.
T Consensus 144 ~g~~~i~l~~G~p-~~~~~~~p~~~~~~~~~~~~~~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~ 222 (517)
T PRK13355 144 AGTHILKLNIGNP-APFGFRTPDEVVYDMAQQLTDTEGYSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELIN 222 (517)
T ss_pred cCCCeEEecCcCC-CcCCCCCCHHHHHHHHHHhhcCCCCCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHH
Confidence 5778999988643 45665 4678889988877643322222233445556666554432 356789999999999999
Q ss_pred HHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC--CCCCCCCCChhHHHHH
Q psy14484 109 VALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD--SRNINKGNSANEIARC 186 (430)
Q Consensus 109 ~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 186 (430)
.+++++.. +++.|++.+|+|..+.......+. ..+.++.+. .+..
T Consensus 223 ~~~~~l~~--------~Gd~Vli~~P~y~~y~~~~~~~g~-------------~~v~~~~~~~~~~~~------------ 269 (517)
T PRK13355 223 LSMSALLD--------DGDEVLIPSPDYPLWTACVNLAGG-------------TAVHYRCDEQSEWYP------------ 269 (517)
T ss_pred HHHHHhCC--------CCCEEEEcCCCCcCHHHHHHHCCC-------------EEEEeecCcccCCCC------------
Confidence 99987764 678899999999987654433322 112222221 1222
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccc-ccccCCCCCc
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-ACEHAEIWPD 265 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~-~~~~~~~~~d 265 (430)
|++++++++. ++++++++.. ++|++| ...+.+.+++|.++|++||+++|+||+|..|...+... ... ...++
T Consensus 270 d~~~l~~~~~---~~~k~i~i~n-P~NPTG-~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~--~~~~~ 342 (517)
T PRK13355 270 DIDDIRSKIT---SRTKAIVIIN-PNNPTG-ALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIA--SLAPD 342 (517)
T ss_pred CHHHHHHhcC---cCceEEEEEC-CCCCCC-cCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHH--HhCCC
Confidence 7899998885 4566666655 678888 55678889999999999999999999999775544211 111 11233
Q ss_pred --e---eeeecccCC-CccccEEEEEc--HHH----HHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh-cCHHH
Q psy14484 266 --F---LCLSKGITG-GYLPLSLVMTT--DKI----YNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK-DNILQ 332 (430)
Q Consensus 266 --~---~~~sK~l~g-G~~~ig~~~~~--~~~----~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~-~~~~~ 332 (430)
+ -+|||.++- | +|+|+++++ +++ .+.+.. .....++.+.+++.++.++|+.... .++.+
T Consensus 343 ~~vi~~~S~SK~~~~~G-~RiG~~i~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~ 414 (517)
T PRK13355 343 LFCVTFSGLSKSHMIAG-YRIGWMILSGNKRIAKDYIEGLNM-------LANMRLCSNVPAQSIVQTALGGHQSVKDYLV 414 (517)
T ss_pred CeEEEEecchhhccCcc-cceEEEEeeCchhhHHHHHHHHHH-------HhcCcCCcChHHHHHHHHHhcCCccHHHHHH
Confidence 2 358998753 6 899999854 443 333321 1122245567777777777742100 11221
Q ss_pred ---HHHHHHHHHHHHHHchhcCCCeeeEeecceEEEE-EEeecCCccchhHHHHHHHHHHHCCcEEeec-------CCEE
Q psy14484 333 ---RISQDMKKITKALTSLITHPKIINFRQKGMIWAF-DVIIEDPEQIETFSKKFFVAALKNELLLRPI-------GNTV 401 (430)
Q Consensus 333 ---~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-------~~~l 401 (430)
++.+..+++.+.|+++ +++....++|.|+.| .+. .......+....+.+.|.++||.+.|+ .+++
T Consensus 415 ~~~~~~~~r~~l~~~L~~~---~g~~~~~p~g~fy~~~~l~-~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~ 490 (517)
T PRK13355 415 PGGRVYEQRELVYNALNAI---PGISAVKPKAAFYIFPKID-VKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHF 490 (517)
T ss_pred HHHHHHHHHHHHHHHHhcC---CCcccCCCCeeeEEEeecC-cccCCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEE
Confidence 2233345555555443 444555677888766 443 211000000123445577889999875 2588
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 402 YLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 402 R~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
|++. ..+++++++++++|.+++.+
T Consensus 491 Ris~--~~~~~~l~~a~~rl~~~~~~ 514 (517)
T PRK13355 491 RVVY--LPRLEDLEDAMDRLADFFSY 514 (517)
T ss_pred EEEe--CCCHHHHHHHHHHHHHHHHH
Confidence 8865 57899999999999998864
No 146
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.93 E-value=2e-23 Score=203.53 Aligned_cols=335 Identities=12% Similarity=0.079 Sum_probs=208.8
Q ss_pred cccccccCCCCCHHHHHHHHHHHhhcc-cccc-----CCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHH
Q psy14484 41 SSWWVNLFGHSNSYINKALKNQLNKLE-HVML-----SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMS 114 (430)
Q Consensus 41 ~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~-----~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~ 114 (430)
.+.+....||++|++++++..++ ... .+.. +.+..+..++++++++++++.+.+++.++++|+++.+.++..+
T Consensus 23 ~~l~~g~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~~ 101 (398)
T cd00613 23 SFLGSGTYKHNPPAVIKRNILEN-EFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAA 101 (398)
T ss_pred ccccccccCCcCcHHHHHHhccc-cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHHH
Confidence 34456678999999988866665 221 1111 1233467789999999999766668888887877777777666
Q ss_pred HHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHH
Q psy14484 115 FHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEIL 194 (430)
Q Consensus 115 ~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~ 194 (430)
+... + +++.|++ +..+|+.+.......+... ..+...++.+..... |++++++.
T Consensus 102 ~~~~---~--~gd~Vl~-~~~~h~~~~~~~~~~~~~~--------g~~~~~v~~~~~~~~------------d~~~l~~~ 155 (398)
T cd00613 102 IRAY---H--KRNKVLV-PDSAHPTNPAVARTRGEPL--------GIEVVEVPSDEGGTV------------DLEALKEE 155 (398)
T ss_pred Hhcc---c--CCCEEEE-cCccCcchHHHHHHhcccC--------CcEEEEeccCCCCCc------------CHHHHHHh
Confidence 5420 0 2455555 5557777655554433110 122334444322211 78888888
Q ss_pred HHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceee--eecc
Q psy14484 195 LKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKG 272 (430)
Q Consensus 195 l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~--~sK~ 272 (430)
+. +++++|++++ ++ ++|.+. +++++|.++|++||+++|+|++|+.....+ .... ..+|+++ ++|.
T Consensus 156 i~---~~t~~viv~~-~~-~~G~~~---~~l~~i~~la~~~g~~livD~~~~~~~~~~---~~~~--~~~d~~~~s~~K~ 222 (398)
T cd00613 156 VS---EEVAALMVQY-PN-TLGVFE---DLIKEIADIAHSAGALVYVDGDNLNLTGLK---PPGE--YGADIVVGNLQKT 222 (398)
T ss_pred cC---CCeEEEEEEC-CC-CCceec---chHHHHHHHHHhcCCEEEEEeccccccCCC---ChHH--cCCCEEEeecccc
Confidence 84 5789999988 76 567663 457999999999999999999876321111 1111 2468765 5576
Q ss_pred c---CCCccccEEEEEcHHHHHhhhcc--CC------cc---------------cccccCCCCCCHHHHHHHHHHHHHHh
Q psy14484 273 I---TGGYLPLSLVMTTDKIYNSIYYK--NN------IN---------------IFLHSHSYSGNPLACCAALATLEIFN 326 (430)
Q Consensus 273 l---~gG~~~ig~~~~~~~~~~~~~~~--~~------~~---------------~~~~~~t~~~~~~~~~aa~~~l~~~~ 326 (430)
+ ++|++++|+++.++++.+.+... +. .. ......+++++++.+.++.+++..+.
T Consensus 223 ~~p~g~Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~ 302 (398)
T cd00613 223 GVPHGGGGPGAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLG 302 (398)
T ss_pred CCCCCCCCCceeEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhC
Confidence 5 33336788999988887764220 00 00 00113345556666666766666554
Q ss_pred hc---CHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEee----cCC
Q psy14484 327 KD---NILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP----IGN 399 (430)
Q Consensus 327 ~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~----~~~ 399 (430)
.+ +..++.++++++++++|+++........ .....+.+.+. .. ....+.++++.|.++|+.+.. .++
T Consensus 303 ~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~~~v~~~~~-~~---~~~~~~~~~~~L~~~gi~~~~~~~~~~~ 376 (398)
T cd00613 303 PEGLKEIAERAHLNANYLAKRLKEVGGVLPFNG--PFFHEFVLRLP-PL---YGIRAEDLAKALIDGGFHAPTMYLPVDG 376 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCC--CeeEEEEEEcC-Cc---chHHHHHHHHhhhhcCccccccccCCCC
Confidence 33 3457888899999999987622111111 11112233333 21 011246799999999998765 357
Q ss_pred EEEEeCCCCCCHHHHHHHHHHH
Q psy14484 400 TVYLMPPYILNKNEIQHMTSAI 421 (430)
Q Consensus 400 ~lR~~~~~~~t~e~i~~~~~~l 421 (430)
.+|++|++.+|++|||+++++|
T Consensus 377 ~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 377 TLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred eEEEEcCCCCCHHHHHHHHHhC
Confidence 8999999999999999998764
No 147
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=1.1e-22 Score=194.68 Aligned_cols=341 Identities=11% Similarity=0.100 Sum_probs=232.1
Q ss_pred CCEEEecccccccccCCCCCHHHHHHHHHHHhhcccc-ccCC-----CCCHHHHHHHHHHHhhcCCCC-CeEEEcCCchH
Q psy14484 33 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHV-MLSN-----LTHKPVIKLSEKLSSLTQYKL-GHCFYGSDGAS 105 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~-~~~~-----~~~~~~~~l~~~l~~~~~~~~-~~v~~~~sgte 105 (430)
+..|+|..++ +..+..|.+++.+........ .+.. ..+...++.++.+++++++++ ++|+||++.|+
T Consensus 22 ~~vylD~aa~------~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~ 95 (405)
T COG0520 22 PLVYLDNAAT------SQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTE 95 (405)
T ss_pred CeEEecCccc------ccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhH
Confidence 3468886654 236789999999987654322 2111 122567889999999998884 89999999999
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHH
Q psy14484 106 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 185 (430)
Q Consensus 106 A~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (430)
|++.+........ .+++.||+.+--+|....--..+. .....+++.++.+++...
T Consensus 96 aln~va~~l~~~~-----~~gdeIv~s~~EH~sn~~pw~~~~---------~~~Ga~v~~i~~~~~g~~----------- 150 (405)
T COG0520 96 ALNLVARGLGRSL-----KPGDEIVVSDLEHHSNIVPWQELA---------KRTGAKVRVIPLDDDGLL----------- 150 (405)
T ss_pred HHHHHHHHhhhhh-----cCCCEEEEccCcchhhHHHHHHHH---------HhcCcEEEEEecCCCCCc-----------
Confidence 9999888664210 145788877766665432211111 111234566665543333
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCc
Q psy14484 186 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 265 (430)
Q Consensus 186 ~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d 265 (430)
++++++..+ ++++++|.++. ++|.+|++.| +++|.++||++|+++++|.+|+ ++. ...+...+.+|
T Consensus 151 -~~~~~~~~i---~~~Tklvais~-vSn~tG~~~p----v~~I~~la~~~ga~v~VDaaq~-~~h----~~idv~~l~~D 216 (405)
T COG0520 151 -DLDALEKLI---TPKTKLVALSH-VSNVTGTVNP----VKEIAELAHEHGALVLVDAAQA-AGH----LPIDVQELGCD 216 (405)
T ss_pred -CHHHHHHhc---CCCceEEEEEC-ccccccccch----HHHHHHHHHHcCCEEEEECccc-cCc----cCCCchhcCCC
Confidence 788888877 47899999999 9999999999 9999999999999999999997 432 12333445689
Q ss_pred eeeee--cccCCCccccEEEEEcHHHHHhhhcc-CCccccc-----ccCCC----------CCCHHHHHHHHHHHHHHhh
Q psy14484 266 FLCLS--KGITGGYLPLSLVMTTDKIYNSIYYK-NNINIFL-----HSHSY----------SGNPLACCAALATLEIFNK 327 (430)
Q Consensus 266 ~~~~s--K~l~gG~~~ig~~~~~~~~~~~~~~~-~~~~~~~-----~~~t~----------~~~~~~~~aa~~~l~~~~~ 327 (430)
++.|| |.|.|. ..+|.+++++++.+.+.+. ....... ...++ +.|..+..+..++++.++.
T Consensus 217 f~afsgHKwl~gP-~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ 295 (405)
T COG0520 217 FLAFSGHKWLLGP-TGIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLE 295 (405)
T ss_pred EEEEcccccccCC-CceEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHH
Confidence 99998 767664 4699999999999887431 0000000 00011 1233344444455665543
Q ss_pred ---cCHHHHHHHHHHHHHHHHHchhcCCCeeeE-eecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecCCE---
Q psy14484 328 ---DNILQRISQDMKKITKALTSLITHPKIINF-RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNT--- 400 (430)
Q Consensus 328 ---~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~~~--- 400 (430)
++..++.+++.+++.++|+++......... ..++.++.|.+. .- . +..+.+.|.++||.++.+..+
T Consensus 296 ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~-~~-~-----~~dv~~~L~~~gI~vr~g~~ca~p 368 (405)
T COG0520 296 IGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVK-GI-H-----PHDVATLLDEKGIAVRAGHHCAQP 368 (405)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeC-CC-C-----HHHHHHHHHhCCeEEEeccccccH
Confidence 556778888888888888877433222111 246777777776 31 1 367999999999888865433
Q ss_pred ----------EEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 401 ----------VYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 401 ----------lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
+|+++++++|+||||++++.|+++..
T Consensus 369 ~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 369 LHRLLGVDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred HHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 99999999999999999999998753
No 148
>PRK08363 alanine aminotransferase; Validated
Probab=99.93 E-value=1.2e-22 Score=197.63 Aligned_cols=346 Identities=15% Similarity=0.081 Sum_probs=216.1
Q ss_pred CCCEEEecccccccc-cCCCCCHHHHHHHHHHHhhccc-cccCCCCCHHHHHHHHHHHhhcC--CCCCeEEEcCCchHHH
Q psy14484 32 SGKRYLDAISSWWVN-LFGHSNSYINKALKNQLNKLEH-VMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAV 107 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~-~lG~~~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgteA~ 107 (430)
+|..++|+..|.... .++ .+|.+.+++.+.+..... +....+..++++.+++.+.+..+ .++++|++|+|+++|+
T Consensus 28 ~~~~~i~l~~g~p~~~~~~-p~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 106 (398)
T PRK08363 28 KGIKVIRLNIGDPVKFDFQ-PPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEAL 106 (398)
T ss_pred cCCCeEEEeCCCCCcCCCC-CCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHH
Confidence 467899998885432 344 578899999887754311 11222334555666666554433 5678999999999999
Q ss_pred HHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEe-CCCC-CCCCCCCCChhHHHH
Q psy14484 108 EVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYII-TTPD-SRNINKGNSANEIAR 185 (430)
Q Consensus 108 ~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~ 185 (430)
..++.+++. +++.|++.+++|.++.......+.. ...+ +.+. .+.
T Consensus 107 ~~~~~~~~~--------~gd~Vl~~~p~y~~~~~~~~~~g~~-------------~v~~~~~~~~~~~------------ 153 (398)
T PRK08363 107 QLIFGALLD--------PGDEILIPGPSYPPYTGLVKFYGGV-------------PVEYRTIEEEGWQ------------ 153 (398)
T ss_pred HHHHHHhCC--------CCCEEEEcCCCCcchHHHHHHcCCE-------------EEEeccccccCCc------------
Confidence 999987754 6788999999998875433332221 1112 1111 111
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCc
Q psy14484 186 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 265 (430)
Q Consensus 186 ~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d 265 (430)
.|++++++.+. ++++++++.. ++|++| ...+.+.+++|.++|+++|+++|+||+|..+...+.........-...
T Consensus 154 ~d~~~l~~~~~---~~~~~v~l~~-p~NPtG-~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~ 228 (398)
T PRK08363 154 PDIDDIRKKIT---EKTKAIAVIN-PNNPTG-ALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVP 228 (398)
T ss_pred CCHHHHHhhCC---cceEEEEEEC-CCCCCC-cCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCc
Confidence 17788888775 3566666666 788888 555678899999999999999999999987644442211111111122
Q ss_pred e---eeeecccC-CCccccEEEEE--cHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--hcCHHHHHHHH
Q psy14484 266 F---LCLSKGIT-GGYLPLSLVMT--TDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQD 337 (430)
Q Consensus 266 ~---~~~sK~l~-gG~~~ig~~~~--~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~ 337 (430)
+ -+|||.++ .| +|+|++++ ++++.+.+... . .......++.+.+++.++.++|.... -.+..+.++++
T Consensus 229 vi~~~SfSK~~~~~G-lRiG~~~~~~~~~~~~~l~~~--~-~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~ 304 (398)
T PRK08363 229 VIVMNGLSKVYFATG-WRLGYIYFVDPEGKLAEVREA--I-DKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKER 304 (398)
T ss_pred EEEEecchhccCCcc-ceEEEEEEeCcHHHHHHHHHH--H-HHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 3 37999965 46 89999997 66665554430 0 00011235567777777777664210 12334555666
Q ss_pred HHHHHHHHHchhcCCCeeeEeecceEEEE-EEeecCCccchhHHHHH-HHHHHHCCcEEeec-------CCEEEEeCCCC
Q psy14484 338 MKKITKALTSLITHPKIINFRQKGMIWAF-DVIIEDPEQIETFSKKF-FVAALKNELLLRPI-------GNTVYLMPPYI 408 (430)
Q Consensus 338 ~~~l~~~l~~l~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~a~~~-~~~l~~~Gv~~~~~-------~~~lR~~~~~~ 408 (430)
.+++.+.|+++ +.+....+.|.++.+ .+. ...... ..++ .+.|.++||.+.|+ .+++|+++.
T Consensus 305 ~~~l~~~L~~~---~~~~~~~p~g~~~~~~~l~-~~~~~~---~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~-- 375 (398)
T PRK08363 305 RDYIYKRLNEI---PGISTTKPQGAFYIFPRIE-EGPWKD---DKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFL-- 375 (398)
T ss_pred HHHHHHHHhcC---CCCEecCCCeEEEEEEEec-cCCCCC---HHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec--
Confidence 66666666543 333333556666665 454 311101 1334 45567889999875 257899764
Q ss_pred CCHHHHHHHHHHHHHHHHHhh
Q psy14484 409 LNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 409 ~t~e~i~~~~~~l~~~l~~~~ 429 (430)
.+++++++++++|++++.+.+
T Consensus 376 ~~~~~l~~~l~~l~~~~~~~~ 396 (398)
T PRK08363 376 PPVEILEEAMDRFEEFMRERL 396 (398)
T ss_pred CCHHHHHHHHHHHHHHHHHhc
Confidence 678999999999999887654
No 149
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.9e-23 Score=200.35 Aligned_cols=322 Identities=11% Similarity=0.104 Sum_probs=211.2
Q ss_pred CCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCC-CeEEEcCCchHHHHHHH
Q psy14484 33 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKL-GHCFYGSDGASAVEVAL 111 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~v~~~~sgteA~~~al 111 (430)
+..++|+..| .++++ .+|++++++.+.+...... .|+.....++++.+++.++... ++|++++|+++++..++
T Consensus 25 ~~~~i~l~~~--~~~~~-~~~~~~~~~~~~~~~~~~~---~Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~ 98 (356)
T PRK04870 25 ATGMVKLDAM--ENPYR-LPAELRAELGERLAEVALN---RYPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLA 98 (356)
T ss_pred CCCceeCcCC--CCCCC-CCHHHHHHHHHHhhccccc---cCCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHH
Confidence 5678888776 55666 6789999999887642211 2333334678888888876554 48999999999999998
Q ss_pred HHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHH
Q psy14484 112 KMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDL 191 (430)
Q Consensus 112 ~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 191 (430)
+++.. +++.|++.+|+|.++.......+ .....++..+.+.. |++++
T Consensus 99 ~~~~~--------~gd~vlv~~P~y~~~~~~~~~~g-------------~~~~~i~~~~~~~~------------d~~~l 145 (356)
T PRK04870 99 LACAK--------PGATVLAPEPGFVMYRMSAKLAG-------------LEFVGVPLTADFTL------------DLPAM 145 (356)
T ss_pred HHhcC--------CCCEEEECCCCHHHHHHHHHHcC-------------CEEEEecCCCCCCC------------CHHHH
Confidence 87764 67889999999987643322211 22233433322222 78999
Q ss_pred HHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeeec
Q psy14484 192 EILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSK 271 (430)
Q Consensus 192 e~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK 271 (430)
++.+.. .+++++++.. ++|++|. ..+.+.+++|.++| ++++|+||+|..|......-.....+...-+-+|||
T Consensus 146 ~~~~~~--~~~~~v~l~~-p~NPtG~-~~~~~~~~~i~~~~---~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK 218 (356)
T PRK04870 146 LAAIAE--HRPALVFLAY-PNNPTGN-LFDDADVERIIEAA---PGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSK 218 (356)
T ss_pred HHHhhc--CCCCEEEEcC-CCCCCCC-CCCHHHHHHHHHHC---CCEEEEECCchhhcCcchHHHHhhCCCEEEEecchh
Confidence 998863 3566777766 7888884 45666677777777 789999999987743211001111111112337899
Q ss_pred ccCC-CccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHchh
Q psy14484 272 GITG-GYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKALTSLI 349 (430)
Q Consensus 272 ~l~g-G~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~l~ 349 (430)
++. | +|+|++++++++++.+.. ....++.+.+++.++..+++..+ -++..++++++.+++.+.|+++
T Consensus 219 -~~~~G-lRiG~~i~~~~~i~~~~~--------~~~~~~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~- 287 (356)
T PRK04870 219 -LGLAG-LRLGYLAGHPAWIAELDK--------VRPPYNVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAAL- 287 (356)
T ss_pred -hhhHH-HhhhhhhCCHHHHHHHHH--------ccCCCcCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-
Confidence 544 6 899999999999888765 12344566777776666664211 1233455566666666666554
Q ss_pred cCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-------CCEEEEeCCCCCCHHHHHHHHHHHH
Q psy14484 350 THPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-------GNTVYLMPPYILNKNEIQHMTSAIF 422 (430)
Q Consensus 350 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-------~~~lR~~~~~~~t~e~i~~~~~~l~ 422 (430)
+.+...+..|.++++.+. + ...+.+.|.++||.+.++ .+++|++++ ++++++.++++|+
T Consensus 288 --~~~~~~~~~~~~~~~~~~-~--------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~---~~~~~~~l~~al~ 353 (356)
T PRK04870 288 --PGVTVFPSAANFILVRVP-D--------AAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG---TPEENAQFLAALK 353 (356)
T ss_pred --CCcEECCCCCeEEEEECC-C--------HHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC---CHHHHHHHHHHHH
Confidence 333333455667666554 2 256888899999999874 258999866 8899999999987
Q ss_pred HHH
Q psy14484 423 QTF 425 (430)
Q Consensus 423 ~~l 425 (430)
+++
T Consensus 354 ~~~ 356 (356)
T PRK04870 354 AAL 356 (356)
T ss_pred HhC
Confidence 653
No 150
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.9e-22 Score=196.33 Aligned_cols=346 Identities=12% Similarity=0.052 Sum_probs=213.0
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhc--cccccCCCCCHHHHHHHHHHHhhcC--CCCC-eEEEcCCchHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKL--EHVMLSNLTHKPVIKLSEKLSSLTQ--YKLG-HCFYGSDGASA 106 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~-~v~~~~sgteA 106 (430)
.|..++||..+. +.+..++.+.+++.+.+... ..+....+..++++.+++.+.+..+ ..++ +|++|+|+.+|
T Consensus 31 ~~~~~~~l~~g~---p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~a 107 (403)
T PRK08636 31 AGEDIIDFSMGN---PDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEG 107 (403)
T ss_pred cCCCEEEcCCcC---CCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHH
Confidence 456789987762 33334566777777655432 1122223344566777887776544 4566 79999999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 186 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (430)
+..++++++. +++.|++.+|+|.++.......+. +...++.+.+... +.+.+.
T Consensus 108 l~~~~~~l~~--------~gd~Vlv~~P~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~--~~d~~~---- 160 (403)
T PRK08636 108 YVHLVQAITN--------PGDVAIVPDPAYPIHSQAFILAGG-------------NVHKMPLEYNEDF--ELDEDQ---- 160 (403)
T ss_pred HHHHHHHhCC--------CCCEEEEcCCCCcchHHHHHhcCC-------------EEEEEeccccccC--ccChhh----
Confidence 9999998875 678999999999887544333222 2223332211100 000000
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccc-ccccCCCCCc
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-ACEHAEIWPD 265 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~-~~~~~~~~~d 265 (430)
-.+.++++++++..++.++++.. ++|++| ...+.+.+++|.++|++|++++|+||+|..+...+... ......-.++
T Consensus 161 l~~~l~~~~~~~~~~~~~i~~~~-P~NPTG-~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~ 238 (403)
T PRK08636 161 FFENLEKALRESSPKPKYVVVNF-PHNPTT-ATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKD 238 (403)
T ss_pred hhhHHHHHHhhccCCceEEEEeC-CCCCCC-ccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccc
Confidence 12356777765444567777666 678888 66778889999999999999999999999775443211 1111111122
Q ss_pred ----eeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCH----HHHHHH
Q psy14484 266 ----FLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNI----LQRISQ 336 (430)
Q Consensus 266 ----~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~----~~~~~~ 336 (430)
+.+|||.++ .| +|+|++++++++++.+.. ......++.+.+.+.++..+++. .+.+ .+.+++
T Consensus 239 ~~i~~~S~SK~~~~~G-lRiG~iv~~~~li~~~~~------~~~~~~~~~~~~~q~~~~~~~~~--~~~~~~~~~~~~~~ 309 (403)
T PRK08636 239 VAVESYTLSKSYNMAG-WRVGFVVGNKKLVGALKK------IKSWLDYGMFTPIQVAATIALDG--DQSCVEEIRETYRK 309 (403)
T ss_pred cEEEEEecccccCCcc-ceeeeeeCCHHHHHHHHH------HHHHhcccCChHHHHHHHHHHhC--cHHHHHHHHHHHHH
Confidence 336999996 57 899999999999887765 11222334445555555444431 1223 333444
Q ss_pred HHHHHHHHHHchhcCCCeeeEe-ecceEEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec-------CCEEEEeCCC
Q psy14484 337 DMKKITKALTSLITHPKIINFR-QKGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------GNTVYLMPPY 407 (430)
Q Consensus 337 ~~~~l~~~l~~l~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~-------~~~lR~~~~~ 407 (430)
+.+.+.+.|++. + +.... ..|.++++.++ +...... ...+.+.++ +.||.+.|+ .+++|++.+
T Consensus 310 ~~~~l~~~L~~~---~-~~~~~p~~g~~~~~~l~-~~~~~~~--~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~- 381 (403)
T PRK08636 310 RRDVLIESFANA---G-WELQKPRASMFVWAKIP-EPARHLG--SLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALI- 381 (403)
T ss_pred HHHHHHHHHHHC---C-CcccCCCcceEEEEECC-CccCCCC--HHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEec-
Confidence 444455555442 2 22223 34666666665 3211111 256777654 679999885 268999765
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q psy14484 408 ILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 408 ~~t~e~i~~~~~~l~~~l~~ 427 (430)
.+++++++.+++|++++..
T Consensus 382 -~~~~~l~~~~~rl~~~l~~ 400 (403)
T PRK08636 382 -ENENRIRQAARNIKKFLKE 400 (403)
T ss_pred -CCHHHHHHHHHHHHHHHHh
Confidence 6899999999999998865
No 151
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.93 E-value=3e-23 Score=196.72 Aligned_cols=302 Identities=13% Similarity=0.080 Sum_probs=197.3
Q ss_pred EEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHH
Q psy14484 35 RYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMS 114 (430)
Q Consensus 35 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~ 114 (430)
+++||.+| .++++. ... ...|+.+...+|++++++.++..+++|++|+|+++++..++++
T Consensus 17 ~~i~l~~N--enp~~~------------~~~-----~~~Yp~~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~~- 76 (332)
T PRK06425 17 RIIDFSAN--INDFMD------------IGD-----ISIYPEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLSY- 76 (332)
T ss_pred CEEEeccc--cCCCcC------------hhh-----cccCcCcCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHH-
Confidence 57888887 555531 111 1246777788999999999988889999999999999998864
Q ss_pred HHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHH
Q psy14484 115 FHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEIL 194 (430)
Q Consensus 115 ~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~ 194 (430)
.. ++ .|++.+|+|..+...+...+. +...++... .. .|.+.++
T Consensus 77 ~~--------~~-~vv~~~P~y~~y~~~~~~~G~-------------~v~~vp~~~--~~-----------~~~~~l~-- 119 (332)
T PRK06425 77 IN--------VG-NIIIVEPNFNEYKGYAFTHGI-------------RISALPFNL--IN-----------NNPEILN-- 119 (332)
T ss_pred hC--------CC-cEEEeCCChHHHHHHHHHcCC-------------eEEEEeCCc--cc-----------CcHHHHh--
Confidence 32 33 577779999887555444322 223333321 00 0333333
Q ss_pred HHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCc---eeeeec
Q psy14484 195 LKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD---FLCLSK 271 (430)
Q Consensus 195 l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d---~~~~sK 271 (430)
. .+++++++.. ++|++| ...+.+.+++|.++|+++|+++|+||+|..|...+...........+. +-+|||
T Consensus 120 --~--~~~k~v~l~n-P~NPTG-~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK 193 (332)
T PRK06425 120 --N--YNFDLIFIVS-PDNPLG-NLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTK 193 (332)
T ss_pred --h--cCCCEEEEeC-CCCCcC-CccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCEEEEeecHH
Confidence 2 2445555555 788888 456788899999999999999999999998854332111111111123 337999
Q ss_pred ccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHchh
Q psy14484 272 GIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKALTSLI 349 (430)
Q Consensus 272 ~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~l~ 349 (430)
.++ .| +|+|++++++++++.+.. ...++..+.++..+. ...+.-. .+...+.+++..+++.+.|+++
T Consensus 194 ~~~l~G-lRiGy~v~~~~li~~l~~--------~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~- 262 (332)
T PRK06425 194 ILGIPS-LRIGYIATDDYNMKISRK--------ITEPWSVCDPAIDFI-RSIDLDYVAKHSLDIMENERSYLINNLEAM- 262 (332)
T ss_pred hcCCch-hhheeeecCHHHHHHHHH--------cCCCCccCHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHC-
Confidence 998 67 899999999999888775 223344444433222 1111100 1234555666666677776654
Q ss_pred cCCCeeeE-eecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-------CCEEEEeCCCCCCHHHHHHHHHHH
Q psy14484 350 THPKIINF-RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-------GNTVYLMPPYILNKNEIQHMTSAI 421 (430)
Q Consensus 350 ~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-------~~~lR~~~~~~~t~e~i~~~~~~l 421 (430)
+ +... ++.|.|+++.+. + +.++.+.|+++||.+.++ .+++|+++. ++++.+.++++|
T Consensus 263 --g-~~~~~~~~g~f~~~~~~-~--------~~~~~~~l~~~gi~v~~~~~f~~~~~~~iRis~~---~~~~~~~l~~al 327 (332)
T PRK06425 263 --G-FRAAGDPSANFITFMIP-D--------AHDFYSYLLKNGILVRLLDDYECLGEQYIRIAIR---RRSFNIKLVNAL 327 (332)
T ss_pred --C-CEECCCCCceEEEEEcC-C--------HHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC---CHHHHHHHHHHH
Confidence 2 2222 456788777654 2 367899999999999885 258999866 889999999999
Q ss_pred HHHH
Q psy14484 422 FQTF 425 (430)
Q Consensus 422 ~~~l 425 (430)
++++
T Consensus 328 ~~~~ 331 (332)
T PRK06425 328 RNFL 331 (332)
T ss_pred HHHh
Confidence 8765
No 152
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=3.1e-23 Score=198.77 Aligned_cols=322 Identities=12% Similarity=0.090 Sum_probs=203.6
Q ss_pred CCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHH
Q psy14484 33 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALK 112 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~ 112 (430)
++.++||..| .+.++ .+|.+.+++.+.+.... ..|+.....++++.+++.++.++++|++|+|+++++..+++
T Consensus 23 ~~~~i~l~~~--~~~~~-~~~~~~~a~~~~~~~~~----~~y~~~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~ 95 (353)
T PRK05387 23 LAKLIKLNTN--ENPYP-PSPKVLEAIRAALGDDL----RLYPDPNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFL 95 (353)
T ss_pred ccceeeccCC--CCCCC-CCHHHHHHHHHHhhhhh----hcCCCCcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHH
Confidence 3568999887 44555 37889999988765311 12333334688888888888788999999999999999999
Q ss_pred HHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHH
Q psy14484 113 MSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLE 192 (430)
Q Consensus 113 ~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le 192 (430)
++.. +++.|++.+|+|..+....... ..+...++....+.. |+++++
T Consensus 96 ~l~~--------~gd~vlv~~P~y~~~~~~~~~~-------------g~~~~~v~~~~~~~~------------d~~~l~ 142 (353)
T PRK05387 96 AFFN--------HDRPLLFPDITYSFYPVYAGLY-------------GIPYEEIPLDDDFSI------------DVEDYL 142 (353)
T ss_pred HhcC--------CCCEEEEeCCCHHHHHHHHHHc-------------CCEEEEeecCCCCCC------------CHHHHH
Confidence 8865 6688999999996654322221 122233443322222 667765
Q ss_pred HHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeeecc
Q psy14484 193 ILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKG 272 (430)
Q Consensus 193 ~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK~ 272 (430)
+ . ..++++.. ++|++|...+ .+.+++|.+.++ ++++|+||+|..|+........+......-+-+|||.
T Consensus 143 ~------~-~~~v~~~~-P~NPtG~~~~-~~~~~~l~~~~~--~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~ 211 (353)
T PRK05387 143 R------P-NGGIIFPN-PNAPTGIALP-LAEIERILAANP--DSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKS 211 (353)
T ss_pred h------c-CCEEEEeC-CCCCCCCCCC-HHHHHHHHHhCC--CcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHh
Confidence 2 1 23444444 6788886655 444444444332 8999999999877422110011111111112368999
Q ss_pred cC-CCccccEEEEEcHHHHHhhhccCCcccccc-cCCCCCCHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHchh
Q psy14484 273 IT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLH-SHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKALTSLI 349 (430)
Q Consensus 273 l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~-~~t~~~~~~~~~aa~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~l~ 349 (430)
++ .| +|+|++++++++.+.+.. ... ..+++.+.+++.++.++++..+ .++..++++++.+++.+.|+++
T Consensus 212 ~~~~G-lR~G~~~~~~~~~~~l~~------~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~- 283 (353)
T PRK05387 212 RSLAG-LRVGFAIGHPELIEALNR------VKNSFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEAL- 283 (353)
T ss_pred hcchh-hhceeeecCHHHHHHHHH------hhccCCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-
Confidence 87 56 799999999999887765 111 1345667777777777664211 1234455566666666666654
Q ss_pred cCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-----CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q psy14484 350 THPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----GNTVYLMPPYILNKNEIQHMTSAIFQT 424 (430)
Q Consensus 350 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-----~~~lR~~~~~~~t~e~i~~~~~~l~~~ 424 (430)
+. ...+..|.++++.+. . . . +.++++.|.++||.+.+. .+++|++++ +++++++++++|+++
T Consensus 284 --g~-~~~~~~~~~~~~~~~-~-~--~---~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~~---~~~~~~~~~~~L~~~ 350 (353)
T PRK05387 284 --GF-EVLPSKANFVFARHP-S-H--D---AAELAAKLRERGIIVRHFNKPRIDQFLRITIG---TDEEMEALVDALKEI 350 (353)
T ss_pred --CC-eECCCcCcEEEEECC-C-C--C---HHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC---CHHHHHHHHHHHHHH
Confidence 22 222344556555443 2 1 1 367889999999998764 257999765 779999999999887
Q ss_pred HH
Q psy14484 425 FN 426 (430)
Q Consensus 425 l~ 426 (430)
+.
T Consensus 351 ~~ 352 (353)
T PRK05387 351 LA 352 (353)
T ss_pred hh
Confidence 64
No 153
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.92 E-value=1e-22 Score=197.99 Aligned_cols=344 Identities=14% Similarity=0.105 Sum_probs=215.3
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhccc-cccCCCCCHHHHHHHHHHHhhcC--CCCCeEEEcCCchHHHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEH-VMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAVE 108 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgteA~~ 108 (430)
.+..++||..+.. .+. .+|++.+++.+.+..... +....+...+++.+++.+.+..+ ..++++++++|+++|+.
T Consensus 29 ~~~~~~~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 105 (393)
T PRK05764 29 QGRDVISLGAGEP--DFD-TPEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALY 105 (393)
T ss_pred ccCCEEEeCCCCC--CCC-CCHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHH
Confidence 3557889888753 333 478999999887764321 11112223445566666554433 45678999999999999
Q ss_pred HHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHH
Q psy14484 109 VALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAI 188 (430)
Q Consensus 109 ~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 188 (430)
.++..++. +++.|++.+++|.++........ .+...++....... ..|+
T Consensus 106 ~~~~~~~~--------~gd~vl~~~p~y~~~~~~~~~~g-------------~~~~~~~~~~~~~~----------~~d~ 154 (393)
T PRK05764 106 NAFMALLD--------PGDEVIIPAPYWVSYPEMVKLAG-------------GVPVFVPTGEENGF----------KLTV 154 (393)
T ss_pred HHHHHhcC--------CCCEEEecCCCCcchHHHHHHcC-------------CEEEEEecCcccCC----------cCCH
Confidence 99887754 56789999999987643332211 12223333211000 0167
Q ss_pred HHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccc-ccccc--CCCCC-
Q psy14484 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FACEH--AEIWP- 264 (430)
Q Consensus 189 ~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~-~~~~~--~~~~~- 264 (430)
+++++.++ ++++++++.. ++|++| ...+.+.+++|.++|++||+++|+||+|..+...+.. ..... .+...
T Consensus 155 ~~l~~~l~---~~~~~v~~~~-p~NPtG-~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 229 (393)
T PRK05764 155 EQLEAAIT---PKTKALILNS-PSNPTG-AVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDR 229 (393)
T ss_pred HHHHHhhC---ccceEEEEEC-CCCCCC-cccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCC
Confidence 88888885 3566666666 677888 4566678999999999999999999999876443321 11111 12212
Q ss_pred --ceeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--hcCHHHHHHHHHH
Q psy14484 265 --DFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQDMK 339 (430)
Q Consensus 265 --d~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~~~ 339 (430)
.+.+|||.++ .| +|+|++++++++++.+.. .....+...+++++.++...|+... .....+.++++.+
T Consensus 230 ~i~~~s~SK~~~~~G-~RiG~i~~~~~~~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 302 (393)
T PRK05764 230 TITVNGFSKAYAMTG-WRLGYAAGPKELIKAMSK------LQSHSTSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRD 302 (393)
T ss_pred EEEEecCcccccCcc-ceeEEEecCHHHHHHHHH------HHhhcccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Confidence 2336999988 57 799999999999888764 2222344567777777776664100 1223444555555
Q ss_pred HHHHHHHchhcCCCeeeEeecce-EEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec-----CCEEEEeCCCCCCHH
Q psy14484 340 KITKALTSLITHPKIINFRQKGM-IWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-----GNTVYLMPPYILNKN 412 (430)
Q Consensus 340 ~l~~~l~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~-----~~~lR~~~~~~~t~e 412 (430)
.+.+.|+++ +++....+.|. ++++.+. .........+.++.+.+. +.||.+.++ .+++|+++. .+++
T Consensus 303 ~l~~~L~~~---~g~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~--~~~~ 376 (393)
T PRK05764 303 LMVDGLNEI---PGLECPKPEGAFYVFPNVS-KLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYA--TSLE 376 (393)
T ss_pred HHHHHHhhC---CCCcccCCCcceEEEEecc-cccccccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEec--CCHH
Confidence 666666554 33333345554 4444554 321100001256777765 579999875 268899654 6899
Q ss_pred HHHHHHHHHHHHHHH
Q psy14484 413 EIQHMTSAIFQTFNE 427 (430)
Q Consensus 413 ~i~~~~~~l~~~l~~ 427 (430)
++++++++|.+++.+
T Consensus 377 ~~~~~i~~l~~~~~~ 391 (393)
T PRK05764 377 DLEEGLERIERFLES 391 (393)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998865
No 154
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.92 E-value=1.7e-22 Score=197.24 Aligned_cols=348 Identities=11% Similarity=0.048 Sum_probs=218.0
Q ss_pred EEEECCCCEEEeccccccccc--CCCCCHHHHHHHHHHHhhc--cccccCCCCCHHHHHHHHHHHhhc--------CCCC
Q psy14484 27 SLIDVSGKRYLDAISSWWVNL--FGHSNSYINKALKNQLNKL--EHVMLSNLTHKPVIKLSEKLSSLT--------QYKL 94 (430)
Q Consensus 27 ~~~d~~g~~~lD~~~~~~~~~--lG~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~ 94 (430)
++.+.+|+.++||..|..... + ..++.+.+++.+.+... ..+....+..++++.+++.+.+.+ ..++
T Consensus 26 ~~~~~~~~~~i~l~~g~p~~~~~~-~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~ 104 (412)
T PTZ00433 26 AKPSPSPKSIIKLSVGDPTLDGNL-LTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKK 104 (412)
T ss_pred hccCCCCCCeeecCCcCCCCcCCC-CCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCCh
Confidence 344568899999998843211 2 25778899998877642 111112233455566666665432 2467
Q ss_pred CeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC--CC
Q psy14484 95 GHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD--SR 172 (430)
Q Consensus 95 ~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 172 (430)
++|++|+|+++|+..+++++.. +++.|++..|+|..+.......+ .....++.+. .+
T Consensus 105 ~~i~it~G~~~al~~~~~~~~~--------~gd~vlv~~P~y~~~~~~~~~~g-------------~~~~~i~~~~~~~~ 163 (412)
T PTZ00433 105 DNVVLCSGVSHAILMALTALCD--------EGDNILVPAPGFPHYETVCKAYG-------------IEMRFYNCRPEKDW 163 (412)
T ss_pred hhEEEeCChHHHHHHHHHHhcC--------CCCEEEEccCCcccHHHHHHHcC-------------CEEEEEecCccccC
Confidence 8999999999999999998764 66889999999988744433322 2223343321 11
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcc
Q psy14484 173 NINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTG 252 (430)
Q Consensus 173 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g 252 (430)
.. |+++|++.+. .+++++++.. ++|++| ...+.+.+++|.++|+++|+++|+||+|..|...+
T Consensus 164 ~~------------d~~~l~~~~~---~~~~~i~~~~-p~NPtG-~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~ 226 (412)
T PTZ00433 164 EA------------DLDEIRRLVD---DRTKALIMTN-PSNPCG-SNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNG 226 (412)
T ss_pred cC------------CHHHHHHHhc---cCceEEEEeC-CCCCCC-cccCHHHHHHHHHHHHHcCCeEEEeccccccccCC
Confidence 11 7888888775 3566677766 778888 55677889999999999999999999999875443
Q ss_pred ccc-ccccCC-CCCce--eeeecccCC-CccccEEEEE------cHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHH
Q psy14484 253 KFF-ACEHAE-IWPDF--LCLSKGITG-GYLPLSLVMT------TDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALAT 321 (430)
Q Consensus 253 ~~~-~~~~~~-~~~d~--~~~sK~l~g-G~~~ig~~~~------~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~ 321 (430)
..+ ....+. ..+-+ -+|||.++. | +|+|++++ .+++.+.+.. . ...+++.+.+++.++.++
T Consensus 227 ~~~~~~~~~~~~~~~i~~~SfSK~~~~pG-lRlG~~i~~~p~~~~~~~~~~~~~------~-~~~~~~~~~~~q~a~~~~ 298 (412)
T PTZ00433 227 ATFTSVADFDTTVPRVILGGTAKNLVVPG-WRLGWLLLVDPHGNGGDFLDGMKR------L-GMLVCGPCSVVQAALGEA 298 (412)
T ss_pred CCccchhhccCCCceEEEccchhhcCCCC-eeEEEEEEeCCcccHHHHHHHHHH------H-hhccCCCChHHHHHHHHH
Confidence 221 111111 11222 279999854 6 89999997 2456555543 1 122356677877777766
Q ss_pred HHHH-h--hcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeec-ceEEEEEEeecCCccchhHHHHHHHHHH-HCCcEEee
Q psy14484 322 LEIF-N--KDNILQRISQDMKKITKALTSLITHPKIINFRQK-GMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRP 396 (430)
Q Consensus 322 l~~~-~--~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~ 396 (430)
+..- + -++..+.+++..+.+.+.|++. ..+....++ |.++++.+. ...........++++.|+ ++||.+.|
T Consensus 299 l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~---~~~~~~~p~gg~f~~~~l~-~~~~~~~~~~~~~~~~ll~~~gV~v~p 374 (412)
T PTZ00433 299 LLNTPQEHLEQIVAKLEEGAMVLYNHIGEC---IGLSPTMPRGSMFLMSRLD-LEKFRDIKSDVEFYEKLLEEENVQVLP 374 (412)
T ss_pred HhcCcHHHHHHHHHHHHHHHHHHHHHHhcC---CCCcccCCCeeEEEEEEec-hhhcCCCCCHHHHHHHHHHhcCEEEeC
Confidence 6420 0 1223334444455555555432 223333444 555666665 311000000357888887 57999998
Q ss_pred c-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 397 I-----GNTVYLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 397 ~-----~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
+ .+++|++++ ..++++++++++|.+++..
T Consensus 375 g~~f~~~~~iRis~~--~~~e~l~~al~~l~~~~~~ 408 (412)
T PTZ00433 375 GEIFHMPGFTRLTIS--RPVEVLREAVERIKAFCER 408 (412)
T ss_pred ccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 6 368999776 4588999999999998864
No 155
>PRK05839 hypothetical protein; Provisional
Probab=99.92 E-value=7.9e-23 Score=196.96 Aligned_cols=330 Identities=12% Similarity=0.021 Sum_probs=205.3
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC--CCCCeEEEcCCchHHHHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAVEV 109 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgteA~~~ 109 (430)
.|+.++||..| ...++ .++.+.+++.+.......+....+..++++.+++.+.+.++ .++++|++|+|+++|+..
T Consensus 22 ~~~~~i~l~~~--~p~~~-~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~ 98 (374)
T PRK05839 22 KEYKGLDLTIG--EPQFE-TPKFIQDALKNNAHLLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFN 98 (374)
T ss_pred CCCCeEEcCCC--CCCCC-CCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHH
Confidence 47899999887 45566 36788888887654433333333445677788888877654 578899999999999988
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHH
Q psy14484 110 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIF 189 (430)
Q Consensus 110 al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 189 (430)
++++++.. ++++.|++..|+|..+.......+ .++..++.+...... .|++
T Consensus 99 ~~~~~~~~------~~gd~vlv~~P~y~~~~~~~~~~g-------------~~v~~v~~~~~~~~~----------~d~~ 149 (374)
T PRK05839 99 FPQFVLFD------KQNPTIAYPNPFYQIYEGAAIASR-------------AKVLLMPLTKENDFT----------PSLN 149 (374)
T ss_pred HHHHHhcC------CCCCEEEECCCCchhhHHHHHhcC-------------CEEEEeecccccCCc----------CCcc
Confidence 87766421 156789999999988754433222 222333332111110 0222
Q ss_pred HHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccc-cccC---C--CC
Q psy14484 190 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA-CEHA---E--IW 263 (430)
Q Consensus 190 ~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~-~~~~---~--~~ 263 (430)
+. .+ .+++++++.. ++|++| ...+.+.+++|.++|+++|+++|+||+|..+...+.... .... + ..
T Consensus 150 ~~--~~----~~~k~v~i~n-P~NPTG-~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~ 221 (374)
T PRK05839 150 EK--EL----QEVDLVILNS-PNNPTG-RTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESF 221 (374)
T ss_pred hh--hh----ccccEEEEeC-CCCCcC-cccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCcccc
Confidence 21 22 2356666656 788888 556788899999999999999999999997743222111 1110 0 01
Q ss_pred Cc---eeeeecccCC-CccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHH
Q psy14484 264 PD---FLCLSKGITG-GYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMK 339 (430)
Q Consensus 264 ~d---~~~~sK~l~g-G~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~ 339 (430)
+. +-+|||.++. | +|+|++++++++++.+.. .....++..+.+.+.++.+++. .+++.+.+++.-+
T Consensus 222 ~~vi~~~SfSK~~~~~G-lRiG~ii~~~~~~~~~~~------~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~ 291 (374)
T PRK05839 222 KNVLVINSISKRSSAPG-LRSGFIAGDASILKKYKA------YRTYLGCASPLPLQKAAAVAWL---DDEHAEFFRNIYA 291 (374)
T ss_pred CcEEEEeccccccCCcc-ceeEEEecCHHHHHHHHH------HHhhcCCCCChHHHHHHHHHhc---cchHHHHHHHHHH
Confidence 23 3379998754 5 899999999998887764 1112234455566666655553 2334333332222
Q ss_pred HHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHH-CCcEEeec---------CCEEEEeCCCCC
Q psy14484 340 KITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALK-NELLLRPI---------GNTVYLMPPYIL 409 (430)
Q Consensus 340 ~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~-~Gv~~~~~---------~~~lR~~~~~~~ 409 (430)
..++.+.+. ++. . .+..|.++++.+. + ..++++.|.+ +||.+.|+ .+++|++.+ .
T Consensus 292 ~~~~~~~~~--l~~-~-~p~gg~fi~~~~~-~--------~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~--~ 356 (374)
T PRK05839 292 KNLKLAREI--LGI-T-IPPATFYVWLPVD-N--------DEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALV--Y 356 (374)
T ss_pred HHHHHHHHh--cCC-C-CCCeeEEEEEeCC-C--------hHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEec--C
Confidence 222323222 111 1 2334566666654 2 2468888865 89999884 268999764 4
Q ss_pred CHHHHHHHHHHHHHHHH
Q psy14484 410 NKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 410 t~e~i~~~~~~l~~~l~ 426 (430)
+++++.+++++|.++++
T Consensus 357 ~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 357 DTPKLEKALEIIKTYLE 373 (374)
T ss_pred CHHHHHHHHHHHHHHhh
Confidence 79999999999988764
No 156
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.92 E-value=9.5e-23 Score=197.87 Aligned_cols=338 Identities=15% Similarity=0.127 Sum_probs=212.5
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhcc-ccccCCCCCHHHHHHHHHHHhhc--CCCCCeEEEcCCchHHHHHH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLE-HVMLSNLTHKPVIKLSEKLSSLT--QYKLGHCFYGSDGASAVEVA 110 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~v~~~~sgteA~~~a 110 (430)
..++||..+ ...++. ++.+.+++.+.+.... .+....+..++.+.+++.+.+.+ +.++++|++|+|+++|+..+
T Consensus 33 ~~~i~l~~~--~~~~~~-~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~ 109 (391)
T PRK08361 33 ENVISLGIG--EPDFDT-PKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLA 109 (391)
T ss_pred cCeEEcCCC--CCCCCC-CHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHH
Confidence 457888776 344553 6788888888765421 11122233355566666665443 35678999999999999999
Q ss_pred HHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHH
Q psy14484 111 LKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFD 190 (430)
Q Consensus 111 l~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 190 (430)
++.++. +++.|++.+++|.++...... .+ .+...++.+...... .|+++
T Consensus 110 ~~~l~~--------~g~~Vlv~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~~~~~----------~d~~~ 158 (391)
T PRK08361 110 FESLLE--------EGDEVIIPDPAFVCYVEDAKI-AE------------AKPIRIPLREENEFQ----------PDPDE 158 (391)
T ss_pred HHHhcC--------CCCEEEEcCCCCcccHHHHHH-cC------------CEEEEEecCCccCCC----------CCHHH
Confidence 987754 567899999999876432222 11 122333332211000 17889
Q ss_pred HHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccc-cccccCCCCCc--ee
Q psy14484 191 LEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FACEHAEIWPD--FL 267 (430)
Q Consensus 191 le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~-~~~~~~~~~~d--~~ 267 (430)
+++.+. .+++++++.. ++|++| ...+.+.+++|.++|+++++++|+||+|..+...+.. ..........+ +.
T Consensus 159 l~~~i~---~~~~~v~i~~-p~NPtG-~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~ 233 (391)
T PRK08361 159 LLELIT---KRTRMIVINY-PNNPTG-ATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILAN 233 (391)
T ss_pred HHHhcc---cccEEEEEeC-CCCCCC-cCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEe
Confidence 988886 3566777776 788888 4566778899999999999999999999876433221 11111111122 23
Q ss_pred eeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh----cCHHHHHHHHHHHHH
Q psy14484 268 CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK----DNILQRISQDMKKIT 342 (430)
Q Consensus 268 ~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~----~~~~~~~~~~~~~l~ 342 (430)
+|||.++ .| +|+|++++++++++.+.. .....+++.+.+.+.++..+|+.-.. +...+.++++.+.+.
T Consensus 234 s~SK~~~~~G-lRiG~~~~~~~~~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 306 (391)
T PRK08361 234 SFSKTFAMTG-WRLGFVIAPEQVIKDMIK------LHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVL 306 (391)
T ss_pred cCchhcCCcH-hhhhhhccCHHHHHHHHH------HHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHH
Confidence 7899997 56 899999999988877654 11223445566666666666642111 122333444455555
Q ss_pred HHHHchhcCCCeeeEeecceE-EEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec-------CCEEEEeCCCCCCHHH
Q psy14484 343 KALTSLITHPKIINFRQKGMI-WAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------GNTVYLMPPYILNKNE 413 (430)
Q Consensus 343 ~~l~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~-------~~~lR~~~~~~~t~e~ 413 (430)
+.|+.+ +.+....+.|.+ +++.+. .... . ..++.+.|+ ++||.+.|+ .+++|++.+ .++++
T Consensus 307 ~~L~~~---~~~~~~~p~g~~~~~~~l~-~~~~-~---~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~ 376 (391)
T PRK08361 307 KRLKEM---PHIKVFEPKGAFYVFANID-ETGM-S---SEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYA--TSKEK 376 (391)
T ss_pred HHHHhC---CCCeecCCCEEEEEEEECC-CCCC-C---HHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEec--CCHHH
Confidence 555543 333334455554 444554 3111 1 256777776 479999874 257899766 57889
Q ss_pred HHHHHHHHHHHHHH
Q psy14484 414 IQHMTSAIFQTFNE 427 (430)
Q Consensus 414 i~~~~~~l~~~l~~ 427 (430)
+++++++|++++++
T Consensus 377 l~~al~~l~~~l~~ 390 (391)
T PRK08361 377 LIEAMERMEKALEE 390 (391)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998865
No 157
>PRK08068 transaminase; Reviewed
Probab=99.92 E-value=1.6e-22 Score=196.19 Aligned_cols=335 Identities=10% Similarity=0.000 Sum_probs=211.2
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhccc--cccCCCCCHHHHHHHHHHHhhcC--CCCC-eEEEcCCchHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEH--VMLSNLTHKPVIKLSEKLSSLTQ--YKLG-HCFYGSDGASA 106 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~--~~~~-~v~~~~sgteA 106 (430)
.+..++||..+. +-...+|.+.+++.+.+..... +....+..++++++++.+.+.++ .+++ +|++|+|++++
T Consensus 30 ~~~~~i~l~~~~---p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~ 106 (389)
T PRK08068 30 EGHDVINLGQGN---PDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAG 106 (389)
T ss_pred cCCCeEEecCCC---CCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHH
Confidence 455688988762 3334578899999887764321 11223334566667666655444 4667 79999999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 186 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (430)
+..++.+... +++.|++.+|+|..+.......+. ....++....... .-
T Consensus 107 l~~~~~~~~~--------~gd~vlv~~P~y~~~~~~~~~~g~-------------~~~~i~~~~~~~~----------~~ 155 (389)
T PRK08068 107 LVELPQCLMN--------PGDTILVPDPGYPDYLSGVALARA-------------QFETMPLIAENNF----------LP 155 (389)
T ss_pred HHHHHHHhCC--------CCCEEEEcCCCCcchHHHHHhcCC-------------EEEEeecccccCC----------CC
Confidence 9998887664 668899999999877544332221 2223333211000 01
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc-c-cccccCCCC-
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-F-FACEHAEIW- 263 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~-~-~~~~~~~~~- 263 (430)
|++++++.+. .+++++++.. ++|++| ...+.+.+++|.++|++|++++|+||+|..+...+. . ......+..
T Consensus 156 d~~~l~~~~~---~~~~~v~l~~-P~NPTG-~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~ 230 (389)
T PRK08068 156 DYTKIPEEVA---EKAKLMYLNY-PNNPTG-AVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKD 230 (389)
T ss_pred CHHHHHHhcc---ccceEEEEEC-CCCCCC-CcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccC
Confidence 6788888775 3456666665 678888 667888899999999999999999999987655442 1 111222222
Q ss_pred --CceeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--hcCHHHHHHHHH
Q psy14484 264 --PDFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQDM 338 (430)
Q Consensus 264 --~d~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~~ 338 (430)
..+.+|||.++ .| +|+|++++++++++.+.. .......+..+..+.++.+++.... -+...+.++++.
T Consensus 231 ~~i~~~S~SK~~g~~G-lRiG~~~~~~~l~~~l~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r 303 (389)
T PRK08068 231 VGIELYTLSKTFNMAG-WRVAFAVGNESVIEAINL------LQDHLFVSLFGAIQDAAIEALLSDQSCVAELVARYESRR 303 (389)
T ss_pred CEEEEecchhccCCcc-ceeEeEecCHHHHHHHHH------HHhhccCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 22347999996 46 899999999999888765 1111122333344555555553111 123445556666
Q ss_pred HHHHHHHHchhcCCCeeeEeecceE-EEEEEeecCCccchhHHHHHHHHHHH-CCcEEeec-------CCEEEEeCCCCC
Q psy14484 339 KKITKALTSLITHPKIINFRQKGMI-WAFDVIIEDPEQIETFSKKFFVAALK-NELLLRPI-------GNTVYLMPPYIL 409 (430)
Q Consensus 339 ~~l~~~l~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~a~~~~~~l~~-~Gv~~~~~-------~~~lR~~~~~~~ 409 (430)
+.+.+.|+++ + +...++.|.+ +++.+. ... . +.++++.|++ +||.+.|+ .+++||+++ .
T Consensus 304 ~~~~~~L~~~---g-~~~~~~~g~~~~~v~~~-~~~--~---~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~--~ 371 (389)
T PRK08068 304 NAFISACREI---G-WEVDAPKGSFFAWMPVP-KGY--T---SEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLL--T 371 (389)
T ss_pred HHHHHHHHHC---C-CcccCCCeeEEEEEECC-CCC--C---HHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEc--C
Confidence 6666666554 2 2223455655 566665 321 1 3679999886 59999874 258899775 5
Q ss_pred CHHHHHHHHHHHHHH
Q psy14484 410 NKNEIQHMTSAIFQT 424 (430)
Q Consensus 410 t~e~i~~~~~~l~~~ 424 (430)
+++.+.+++++|.++
T Consensus 372 ~~~~l~~al~~l~~~ 386 (389)
T PRK08068 372 DEERLREAVERIGKL 386 (389)
T ss_pred CHHHHHHHHHHHHHh
Confidence 678888888888753
No 158
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=5.2e-23 Score=198.17 Aligned_cols=322 Identities=13% Similarity=0.088 Sum_probs=209.0
Q ss_pred CCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHH
Q psy14484 33 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALK 112 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~ 112 (430)
+..++||..| .+++| .+|.+.+++.+...... .|+...-.++++.+++.++.++++|++|+|+++++..+++
T Consensus 35 ~~~~i~l~~~--~~~~~-~~~~~~~al~~~~~~~~-----~Y~~~~g~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~ 106 (371)
T PRK05166 35 VPRIAKLGSN--ENPLG-PSPAVRRAFADIAELLR-----LYPDPQGRALREAIAARTGVPADRIILGNGSEDLIAVICR 106 (371)
T ss_pred CcceEEcCCC--CCCCC-CCHHHHHHHHHHHHHhh-----cCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHH
Confidence 4478999887 56676 57888888887544322 2232222378888888887788899999999999998888
Q ss_pred HHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHH
Q psy14484 113 MSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLE 192 (430)
Q Consensus 113 ~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le 192 (430)
++.. +++.|++..|+|.++....... ...+..++....+.. |+++++
T Consensus 107 ~~~~--------~gd~vli~~P~y~~~~~~~~~~-------------g~~~~~v~~~~~~~~------------~~~~l~ 153 (371)
T PRK05166 107 AVLR--------PGDRVVTLYPSFPLHEDYPTMM-------------GARVERVTVTPDLGF------------DLDALC 153 (371)
T ss_pred HhcC--------CCCEEEEcCCChHHHHHHHHHc-------------CCeEEEeecCCCCCC------------CHHHHH
Confidence 7754 6678999999997653322211 122233333222222 788888
Q ss_pred HHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc-ccccccC-CCCCce---e
Q psy14484 193 ILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-FFACEHA-EIWPDF---L 267 (430)
Q Consensus 193 ~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~-~~~~~~~-~~~~d~---~ 267 (430)
+.+++ +++++++.. ++|++|. ..+.+.+++|.++|++ ++++|+||+|..|...+. ....... ...+++ -
T Consensus 154 ~~~~~---~~~~v~l~~-p~NPtG~-~~~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~ 227 (371)
T PRK05166 154 AAVAR---APRMLMFSN-PSNPVGS-WLTADQLARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLR 227 (371)
T ss_pred Hhhhc---CCCEEEEeC-CCCCCCC-CCCHHHHHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEe
Confidence 88863 445666666 7888884 5566778888888875 889999999987753221 1111111 112223 3
Q ss_pred eeecccC-CCccccEEEEE-cHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHH
Q psy14484 268 CLSKGIT-GGYLPLSLVMT-TDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKA 344 (430)
Q Consensus 268 ~~sK~l~-gG~~~ig~~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-~~~~~~~~~~~~~~l~~~ 344 (430)
+|||.++ .| +|+|++++ ++++.+.+.. ....++.+.+++.++.++|..-+ -+...+.+++..+++.+.
T Consensus 228 SfSK~~~l~G-lRiG~~i~~~~~l~~~~~~--------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~ 298 (371)
T PRK05166 228 TFSKAYGLAG-LRVGYGLVSDPELVGLLDR--------VRTPFNVNGAAQAAALAALDDEEHLAKGVALALAERERLKKE 298 (371)
T ss_pred echHhhhcch-hheeeeecCCHHHHHHHHH--------hccCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 6999998 67 89999776 6777777654 22345567777766766664211 122234445555566666
Q ss_pred HHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-----CCEEEEeCCCCCCHHHHHHHHH
Q psy14484 345 LTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----GNTVYLMPPYILNKNEIQHMTS 419 (430)
Q Consensus 345 l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-----~~~lR~~~~~~~t~e~i~~~~~ 419 (430)
|+.. +. ...+..|.++++.+. .+ +.++++.|.++||.+.|+ .+++|++++ ++++.+++++
T Consensus 299 L~~~---g~-~~~p~~g~fl~~~~~-~~-------~~~l~~~l~~~gi~v~p~~~~~~~~~iRi~~~---~~~~~~~l~~ 363 (371)
T PRK05166 299 LAEM---GY-RIAPSRANFLFFDAR-RP-------ASAVAEALLRQGVIVKPWKQPGFETFIRVSIG---SPEENDHFVA 363 (371)
T ss_pred HHHC---cC-eeCCCcCCEEEEeCC-CC-------HHHHHHHHHHCCeEEecCCCCCCCCeEEEEcC---CHHHHHHHHH
Confidence 6543 22 223456777766543 21 357899999999999886 268999866 6777888888
Q ss_pred HHHHHH
Q psy14484 420 AIFQTF 425 (430)
Q Consensus 420 ~l~~~l 425 (430)
.|+.++
T Consensus 364 ~l~~i~ 369 (371)
T PRK05166 364 ALDKVL 369 (371)
T ss_pred HHHHHh
Confidence 887654
No 159
>PRK08175 aminotransferase; Validated
Probab=99.92 E-value=2.6e-22 Score=195.02 Aligned_cols=341 Identities=13% Similarity=0.125 Sum_probs=217.5
Q ss_pred CCEEEecccccccccCCCCCHHHHHHHHHHHhhcc--ccccCCCCCHHHHHHHHHHHhhcC--CCCC-eEEEcCCchHHH
Q psy14484 33 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLE--HVMLSNLTHKPVIKLSEKLSSLTQ--YKLG-HCFYGSDGASAV 107 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~--~~~~-~v~~~~sgteA~ 107 (430)
|.+++||..+ .+.+..+|.+.+++.+.+.... .+..+.+..++++.+++.+.+.++ ..++ ++++|+|+++++
T Consensus 28 ~~~~i~l~~g---~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l 104 (395)
T PRK08175 28 GEDIIDFSMG---NPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGL 104 (395)
T ss_pred CCCeEEcCCC---CCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHH
Confidence 5788998876 3344456778888777664321 112222334566677777765533 3556 799999999999
Q ss_pred HHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHH
Q psy14484 108 EVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCA 187 (430)
Q Consensus 108 ~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 187 (430)
..++..++. +++.|++.+|+|..+.......+ .+...++.+. .. .+
T Consensus 105 ~~~~~~~~~--------~gd~Vlv~~P~y~~~~~~~~~~g-------------~~~~~v~~~~--~~-----------~~ 150 (395)
T PRK08175 105 AHLMLATLD--------HGDTVLVPNPSYPIHIYGAVIAG-------------AQVRSVPLVE--GV-----------DF 150 (395)
T ss_pred HHHHHHhCC--------CCCEEEEcCCCCcchHHHHHHcC-------------CeEEEEeccc--CC-----------Cc
Confidence 988877654 56889999999987644332211 1223333321 11 03
Q ss_pred HHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccc-c-cccCC---C
Q psy14484 188 IFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-A-CEHAE---I 262 (430)
Q Consensus 188 ~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~-~-~~~~~---~ 262 (430)
.++++++++....+++++++.. ++|++| ...+.+.+++|.++|++||+++|+||+|..+...+... . ....+ .
T Consensus 151 ~~~l~~~l~~~~~~~~~v~i~~-p~NPtG-~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~ 228 (395)
T PRK08175 151 FNELERAIRESYPKPKMMILGF-PSNPTA-QCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDV 228 (395)
T ss_pred HHHHHHHHhhccCCceEEEEeC-CCCCCC-CCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccC
Confidence 6778888875434677777776 788888 66778889999999999999999999998764433211 1 11111 1
Q ss_pred CCceeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--hcCHHHHHHHHHH
Q psy14484 263 WPDFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQDMK 339 (430)
Q Consensus 263 ~~d~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~~~ 339 (430)
..-+.+|||.++ .| +|+|++++++++++.+.. ......++.+.+.+.++.++++..+ ...+.+.++++.+
T Consensus 229 ~i~~~S~SK~~g~pG-lRiG~~~~~~~l~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 301 (395)
T PRK08175 229 AVEFFTLSKSYNMAG-WRIGFMVGNPELVSALAR------IKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRD 301 (395)
T ss_pred EEEEeeccccccCcc-hhheeeeCCHHHHHHHHH------HHhhcccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 112347999996 46 899999999999887765 1122234455556666666664211 1223444555566
Q ss_pred HHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec-------CCEEEEeCCCCCCH
Q psy14484 340 KITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------GNTVYLMPPYILNK 411 (430)
Q Consensus 340 ~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~-------~~~lR~~~~~~~t~ 411 (430)
++.+.|+.+ +.....+..|.++++.+. .+..... +..+++.++ +.||.+.|+ .+++|++.+ .++
T Consensus 302 ~~~~~L~~~---~~~~~~p~~g~~i~i~l~-~~~~~~~--~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~--~~~ 373 (395)
T PRK08175 302 VLVKGLHEA---GWMVEMPKASMYVWAKIP-EPYAAMG--SLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALI--ENR 373 (395)
T ss_pred HHHHHHHHc---CCcccCCCEEEEEEEECC-cccCCCC--HHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeC--CCH
Confidence 666666554 221112334777777776 4321111 356887765 679999885 257999764 688
Q ss_pred HHHHHHHHHHHHHHHH
Q psy14484 412 NEIQHMTSAIFQTFNE 427 (430)
Q Consensus 412 e~i~~~~~~l~~~l~~ 427 (430)
+.+.+++++|.+++.+
T Consensus 374 ~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 374 DRIRQAIRGIKAMFRA 389 (395)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998875
No 160
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=8.5e-24 Score=201.91 Aligned_cols=309 Identities=13% Similarity=0.142 Sum_probs=205.1
Q ss_pred EEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHH
Q psy14484 35 RYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMS 114 (430)
Q Consensus 35 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~ 114 (430)
..+|+.+| .+++| .+|.+. ... ...|+.....++++++++.++.++++|++++|++|++..+++++
T Consensus 29 ~~~~l~~N--enp~~-~~~~~~------~~~-----~~~Yp~~~~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~ 94 (351)
T PRK01688 29 GDVWLNAN--EYPTA-VEFQLT------QQT-----LNRYPECQPKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAF 94 (351)
T ss_pred CceEecCC--CCCCC-CChhhc------ccc-----cccCCCCChHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHh
Confidence 35888777 67777 334321 111 12466666679999999999889999999999999999999877
Q ss_pred HHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHH
Q psy14484 115 FHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEIL 194 (430)
Q Consensus 115 ~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~ 194 (430)
.. ++++.|++.+|+|..+...+...+ .+...++.+.++.. |+++++++
T Consensus 95 ~~-------~g~~~vli~~P~y~~y~~~~~~~G-------------~~~~~v~~~~~~~~------------d~~~l~~~ 142 (351)
T PRK01688 95 CE-------PGKDAILYCPPTYGMYSVSAETIG-------------VEIRTVPTLDNWQL------------DLPAIADN 142 (351)
T ss_pred cC-------CCCCEEEEcCCCHHHHHHHHHHcC-------------CEEEEeecCCCCCC------------CHHHHHHh
Confidence 54 134789999999976643322211 22234444332222 78888877
Q ss_pred HHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCcee---eeec
Q psy14484 195 LKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL---CLSK 271 (430)
Q Consensus 195 l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~---~~sK 271 (430)
+. +++++++.. ++|++| ...+.+.+++|.+.|++ ++++|+||+|..|....+. .......++++ ||||
T Consensus 143 ~~----~~~lv~l~n-PnNPTG-~~~~~~~l~~l~~~~~~-~~~vivDEay~~f~~~~s~--~~~~~~~~n~iv~rSfSK 213 (351)
T PRK01688 143 LD----GVKVVYVCS-PNNPTG-NLINPQDLRTLLELTRG-KAIVVADEAYIEFCPQASL--AGWLAEYPHLVILRTLSK 213 (351)
T ss_pred cc----CCcEEEEeC-CCCCCC-CCCCHHHHHHHHHhCCC-CcEEEEECchhhcCCCCCh--HHHHhhCCCEEEEecchH
Confidence 62 455555555 778888 45667778888888876 6899999999887422111 11112234433 7999
Q ss_pred ccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHH--h-hcCHHHHHHHHHHHHHHHHHc
Q psy14484 272 GIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIF--N-KDNILQRISQDMKKITKALTS 347 (430)
Q Consensus 272 ~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~--~-~~~~~~~~~~~~~~l~~~l~~ 347 (430)
.++ .| +|+|++++++++++.+.. ....|+.+.+++.++.++|+.. + -.+..+.+.+..+++.+.|+.
T Consensus 214 ~~glaG-lRiGy~i~~~~~i~~l~~--------~~~~~~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 284 (351)
T PRK01688 214 AFALAG-LRCGFTLANEEVINLLLK--------VIAPYPLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKE 284 (351)
T ss_pred hhcCHH-HHHhHHhCCHHHHHHHHh--------ccCCCCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 987 46 899999999999888876 2334566767666676666421 0 112234445555666666655
Q ss_pred hhcCCCee-eEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec------CCEEEEeCCCCCCHHHHHHHHHH
Q psy14484 348 LITHPKII-NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI------GNTVYLMPPYILNKNEIQHMTSA 420 (430)
Q Consensus 348 l~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~------~~~lR~~~~~~~t~e~i~~~~~~ 420 (430)
+ +.+. ..+..++|+.+.+. + +.++.+.|+++||.++++ .+++|+++. ++++++.++++
T Consensus 285 ~---~~~~~~~ps~~nfi~~~~~-~--------~~~l~~~L~~~gi~vr~~~~~~~~~~~iRis~~---~~~e~~~l~~a 349 (351)
T PRK01688 285 I---PCVEQVFDSETNYILARFT-A--------SSAVFKSLWDQGIILRDQNKQPGLSNCLRITIG---TREECQRVIDA 349 (351)
T ss_pred C---CCCCeECCCCCcEEEEEcC-C--------HHHHHHHHHHCCeEEEECCCcCCCCCeEEEeCC---CHHHHHHHHHh
Confidence 4 3322 23455777766554 2 367999999999999864 268999876 78999999988
Q ss_pred HH
Q psy14484 421 IF 422 (430)
Q Consensus 421 l~ 422 (430)
|+
T Consensus 350 l~ 351 (351)
T PRK01688 350 LR 351 (351)
T ss_pred hC
Confidence 73
No 161
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.92 E-value=1.8e-22 Score=195.66 Aligned_cols=334 Identities=11% Similarity=0.041 Sum_probs=210.0
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhcc--ccccCCCCCHHHHHHHHHHHhhcC--CCCC-eEEEcCCchHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLE--HVMLSNLTHKPVIKLSEKLSSLTQ--YKLG-HCFYGSDGASA 106 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~--~~~~-~v~~~~sgteA 106 (430)
.|..++|+..| ...++ .+|.+.+++.+.+.... .+....+..++++.+++.+.+.++ .+++ .|++|+|++++
T Consensus 29 ~~~~~i~l~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~ 105 (385)
T PRK09276 29 RGVDVISLGIG--DPDLP-TPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEG 105 (385)
T ss_pred cCCCEEEecCC--CCCCC-CCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHH
Confidence 45568898887 33443 46788999988775421 111112233556667776665543 3455 58999999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 186 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (430)
+..++++++. +++.|++.+|+|.++.......+. ....++........ .
T Consensus 106 i~~~~~~~~~--------~gd~Vl~~~P~y~~~~~~~~~~g~-------------~~~~v~~~~~~g~~----------~ 154 (385)
T PRK09276 106 IAHIPLAFVN--------PGDVVLVPDPGYPVYKIGTIFAGG-------------EPYFMPLKEENGFL----------P 154 (385)
T ss_pred HHHHHHHhCC--------CCCEEEEcCCCCcChHHHHHHcCC-------------EEEEEecCCCCCCc----------C
Confidence 9999988764 678899999999877543332221 22233332110110 1
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccc-c-cccC---C
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-A-CEHA---E 261 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~-~-~~~~---~ 261 (430)
|++++++.+. .+++++++++ ++|++| ...+.+.+++|.++|++|++++|+||+|..+...+... . .... +
T Consensus 155 d~~~l~~~~~---~~~~~v~l~~-p~NPtG-~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 229 (385)
T PRK09276 155 DLDAIPEDVA---KKAKLMFINY-PNNPTG-AVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKD 229 (385)
T ss_pred CHHHHHHhcc---ccceEEEEeC-CCCCCC-CCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcC
Confidence 6788877764 4567777776 788888 55678889999999999999999999998774433211 1 1111 1
Q ss_pred CCCceeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--hcCHHHHHHHHH
Q psy14484 262 IWPDFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQDM 338 (430)
Q Consensus 262 ~~~d~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~~ 338 (430)
....+.+|||.++ .| +|+|++++++++++.+.. .......+.+.+.+.++.++|+..+ -+...+.++++.
T Consensus 230 ~~i~~~S~SK~~g~~G-lRiG~~i~~~~l~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 302 (385)
T PRK09276 230 VGIEFHSLSKTYNMTG-WRIGFAVGNADLIAGLGK------VKSNVDSGVFQAIQEAGIAALNGPQEVVEELRKIYQERR 302 (385)
T ss_pred CEEEEecchhhcCCcc-hhheeeeCCHHHHHHHHH------HHhhccCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 2233458999996 46 899999999999888765 1111222345556666666664211 122344455556
Q ss_pred HHHHHHHHchhcCCCeeeEeecceE-EEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec-------CCEEEEeCCCCC
Q psy14484 339 KKITKALTSLITHPKIINFRQKGMI-WAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------GNTVYLMPPYIL 409 (430)
Q Consensus 339 ~~l~~~l~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~-------~~~lR~~~~~~~ 409 (430)
+++.+.|++. . +....+.|.+ +++.+. ... . ..++++.|+ ++||.+.|+ .+++||+++ .
T Consensus 303 ~~l~~~L~~~---~-~~~~~~~~~~~~~v~~~-~~~--~---~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~--~ 370 (385)
T PRK09276 303 DILVEGLRKL---G-LEVEPPKATFYVWAPVP-KGY--T---SAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALT--V 370 (385)
T ss_pred HHHHHHHHhC---C-CcccCCCcceEEEEECC-CCC--C---HHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeC--C
Confidence 6666666553 2 2222344444 555554 321 1 356888876 579999885 258999765 5
Q ss_pred CHHHHHHHHHHHHH
Q psy14484 410 NKNEIQHMTSAIFQ 423 (430)
Q Consensus 410 t~e~i~~~~~~l~~ 423 (430)
+++++.+++++|.+
T Consensus 371 ~~~~l~~~l~~l~~ 384 (385)
T PRK09276 371 PDERIEEAVERIKK 384 (385)
T ss_pred CHHHHHHHHHHHhh
Confidence 78888888888754
No 162
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.92 E-value=2.9e-22 Score=195.44 Aligned_cols=340 Identities=9% Similarity=0.019 Sum_probs=218.5
Q ss_pred CCEEEecccccccccCCCCCHHHHHHHHHHHhhccccc-cCCC-----CCHHHHHHHHHHHhhcCC-CCCeEEEcCCchH
Q psy14484 33 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVM-LSNL-----THKPVIKLSEKLSSLTQY-KLGHCFYGSDGAS 105 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-~~~~-----~~~~~~~l~~~l~~~~~~-~~~~v~~~~sgte 105 (430)
+..|+|..+. |..++.+.+++.+.+....... ...+ ..+..+++++.+++.++. ++++|+|++|+++
T Consensus 23 ~~iYld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 96 (406)
T PRK09295 23 PLAYLDSAAS------AQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTE 96 (406)
T ss_pred ceEEEeCccc------ccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHH
Confidence 4589996653 3357889999988876532111 1011 124566888899999975 5689999999999
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHH
Q psy14484 106 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 185 (430)
Q Consensus 106 A~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (430)
++..+++.+.... ..+++.||+.+..||......... ......++..++.+.+...
T Consensus 97 ~l~~~~~~~~~~~----~~~gd~vl~~~~~~~s~~~~~~~~---------~~~~g~~v~~v~~~~~~~~----------- 152 (406)
T PRK09295 97 GINLVANSWGNSN----VRAGDNIIISEMEHHANIVPWQML---------CARVGAELRVIPLNPDGTL----------- 152 (406)
T ss_pred HHHHHHHHhhhhc----CCCcCEEEECcchhhHHHHHHHHH---------HHHcCcEEEEEecCCCCCC-----------
Confidence 9998887642100 014578888877776542111110 0111223344544332222
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCc
Q psy14484 186 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 265 (430)
Q Consensus 186 ~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d 265 (430)
|+++|++++. +++++|++.. ++|++|.+.| +++|.++|+++|+++++|++|+ ++.. ...+ ....+|
T Consensus 153 -d~~~l~~~i~---~~t~lv~l~~-~~n~tG~~~~----~~~i~~~~~~~~~~vivD~a~~-~g~~--~~~~--~~~~~D 218 (406)
T PRK09295 153 -QLETLPALFD---ERTRLLAITH-VSNVLGTENP----LAEMIALAHQHGAKVLVDGAQA-VMHH--PVDV--QALDCD 218 (406)
T ss_pred -CHHHHHHhcC---CCcEEEEEec-chhcccccCC----HHHHHHHHHHcCCEEEEEcccc-cCcc--ccCc--hhcCCC
Confidence 7889988885 4678888888 9999999988 9999999999999999999996 4432 1222 234578
Q ss_pred eeeee--cccCCCccccEEEEEcHHHHHhhhcc--CCc--cc--ccc----------cCCCCCCHHHHHHHHHHHHHHhh
Q psy14484 266 FLCLS--KGITGGYLPLSLVMTTDKIYNSIYYK--NNI--NI--FLH----------SHSYSGNPLACCAALATLEIFNK 327 (430)
Q Consensus 266 ~~~~s--K~l~gG~~~ig~~~~~~~~~~~~~~~--~~~--~~--~~~----------~~t~~~~~~~~~aa~~~l~~~~~ 327 (430)
++++| |.++. ..+|++++++++.+.+... +.. .. ... ..+-+.+..+..+..++++++.+
T Consensus 219 ~~~~s~~K~~gp--~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~ 296 (406)
T PRK09295 219 FYVFSGHKLYGP--TGIGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSA 296 (406)
T ss_pred EEEeehhhccCC--CCcEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHH
Confidence 88766 95443 3589999999887654321 000 00 000 00113456677777788877654
Q ss_pred ---cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-------
Q psy14484 328 ---DNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI------- 397 (430)
Q Consensus 328 ---~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~------- 397 (430)
+...++.+++.+++.+.|+++........ ..+..++.+.+. .. . ...+.+.|.++||.++.+
T Consensus 297 ~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~-~~~~~iv~~~~~-~~----~--~~~~~~~L~~~gI~v~~g~~c~~~~ 368 (406)
T PRK09295 297 LGLNNIAEYEQNLMHYALSQLESVPDLTLYGP-QNRLGVIAFNLG-KH----H--AYDVGSFLDNYGIAVRTGHHCAMPL 368 (406)
T ss_pred hCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC-CCCceEEEEEEC-Cc----C--HHHHHHHHHhCCeEEeccccchHHH
Confidence 34556777788888888776522211111 122445666554 21 1 246777888999988653
Q ss_pred ------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 398 ------GNTVYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 398 ------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
++.+|+++++.+|++||+.++++|+++..
T Consensus 369 ~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 369 MAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred HHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 24799999999999999999999988643
No 163
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.92 E-value=6.5e-23 Score=194.13 Aligned_cols=303 Identities=11% Similarity=0.093 Sum_probs=198.6
Q ss_pred CCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHH
Q psy14484 33 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALK 112 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~ 112 (430)
..+++|+.+| .+++|...+.+.+ ..+.. ++... .+|++.+++.+ +.++|++|+|+++|+..++.
T Consensus 19 ~~~~i~l~~n--e~p~~~~~~~~~~---~~~~~--------yp~~~-~~Lr~~ia~~~--~~~~I~it~Gs~~al~~~~~ 82 (330)
T PRK05664 19 LADWLDLSTG--IAPWPWPVPAIPA---DAWAR--------LPETD-DGLEAAARAYY--GAPQLLPVAGSQAAIQALPR 82 (330)
T ss_pred HHHheeecCC--cCCCCCCCcccCH---HHHHh--------CCCCh-HHHHHHHHHHh--CCCCEEECcCHHHHHHHHHH
Confidence 3467898888 5788876554432 12222 22222 57788888888 56899999999999987753
Q ss_pred HHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHH
Q psy14484 113 MSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLE 192 (430)
Q Consensus 113 ~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le 192 (430)
+ . +++.|++.+|+|.++.......+. + .+++| +++++
T Consensus 83 ~--~--------~gd~v~v~~P~y~~~~~~~~~~g~-------------~--~~~v~------------------~~~~~ 119 (330)
T PRK05664 83 L--R--------APGRVGVLSPCYAEHAHAWRRAGH-------------Q--VRELD------------------EAEVE 119 (330)
T ss_pred c--c--------CCCEEEEcCCChHHHHHHHHHcCC-------------e--EEEec------------------hhhHh
Confidence 1 1 567899999999887544333222 2 22222 23455
Q ss_pred HHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCc---eeee
Q psy14484 193 ILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD---FLCL 269 (430)
Q Consensus 193 ~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d---~~~~ 269 (430)
+.++ ....+++++| +|++| ...+.+.+++|.++|+++|+++|+||+|.++....+.... .-.++ +-+|
T Consensus 120 ~~~~---~~~~v~l~nP--~NPTG-~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~---~~~~~vi~~~Sf 190 (330)
T PRK05664 120 AALD---SLDVLVVVNP--NNPTG-RRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAAC---AHRPGLIVLRSF 190 (330)
T ss_pred hhhc---CCCEEEEeCC--cCCCC-CccCHHHHHHHHHHHHhcCCEEEEECCcccCCCccccccc---ccCCCEEEEeec
Confidence 5553 2224566666 47788 4567777999999999999999999999866422221111 11233 3379
Q ss_pred ecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHc
Q psy14484 270 SKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKALTS 347 (430)
Q Consensus 270 sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~ 347 (430)
||.++ .| +|+|++++++++++.+.. ...++..+.+++.++.++|+... .....+.++++.+++.+.|++
T Consensus 191 SK~~gl~G-lRiG~~v~~~~l~~~~~~--------~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~ 261 (330)
T PRK05664 191 GKFFGLAG-ARLGFVLAEPALLRALAE--------LLGPWTVSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRR 261 (330)
T ss_pred cccccCCC-cceEEEEeCHHHHHHHHH--------hcCCCCCCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998 67 899999999999888775 23345567777777777775221 123455566666667776665
Q ss_pred hhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec--CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 348 LITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI--GNTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 348 l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~--~~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
+ .. ....+.++++++... + +..+.+.|.++||.+... .+++|++++. +++++++++++|++..
T Consensus 262 ~---~~-~~~~~~~~f~~~~~~-~--------~~~~~~~l~~~gi~v~~f~~~~~iRis~~~--~~~~~~~l~~al~~~~ 326 (330)
T PRK05664 262 H---GL-TPAGGCALFQWVRTE-D--------AAALHEFLARRGILTRLFEQPASLRFGLPA--DEADWARLDQALLAYR 326 (330)
T ss_pred C---CC-cccCCcceEEEEecC-C--------HHHHHHHHHHCCeEEEECCCCCeEEEECCC--CHHHHHHHHHHHHHHH
Confidence 4 21 111222344444332 1 367889999999999875 3789997663 6788999999998776
Q ss_pred HH
Q psy14484 426 NE 427 (430)
Q Consensus 426 ~~ 427 (430)
.+
T Consensus 327 ~~ 328 (330)
T PRK05664 327 KE 328 (330)
T ss_pred hh
Confidence 55
No 164
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.92 E-value=1.3e-22 Score=196.28 Aligned_cols=334 Identities=11% Similarity=0.057 Sum_probs=209.1
Q ss_pred EEecccccccccCCCCCHHHHHHHHHHHhhccccccCCC-----CCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHH
Q psy14484 36 YLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNL-----THKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVA 110 (430)
Q Consensus 36 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~-----~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~a 110 (430)
|+|..+. +..++.|.+++.+.+........... .....+++++.+++++++++++|+|++|+++++..+
T Consensus 2 yld~aa~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~a 75 (379)
T TIGR03402 2 YLDNNAT------TRVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTA 75 (379)
T ss_pred cCCCcCC------CCCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHH
Confidence 5665443 34578999999988764211111011 123456888999999988888999999999999999
Q ss_pred HHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHH
Q psy14484 111 LKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFD 190 (430)
Q Consensus 111 l~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 190 (430)
++.+.... ++++.|++.+..|+........ ......++..++.+..... |+++
T Consensus 76 l~~~~~~~-----~~~~~vv~~~~~~~s~~~~~~~----------~~~~G~~v~~v~~~~~g~~------------~~~~ 128 (379)
T TIGR03402 76 IKSALAAQ-----PEKRHIITTAVEHPAVLSLCQH----------LEKQGYKVTYLPVDEEGRL------------DLEE 128 (379)
T ss_pred HHHHHHhc-----CCCCeEEEcccccHHHHHHHHH----------HHHcCCEEEEEccCCCCcC------------CHHH
Confidence 98775321 1445666555555432111111 0011223344544322222 7899
Q ss_pred HHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeee
Q psy14484 191 LEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS 270 (430)
Q Consensus 191 le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s 270 (430)
+++.++ +++.+++++. +++++|...| +++|.++|+++|+++|+|++|+ +|.. .++.....+|++++|
T Consensus 129 l~~~i~---~~~~lv~i~~-~~n~tG~~~~----~~~I~~l~~~~g~~vivD~~~~-~g~~----~~~~~~~~~D~~~~s 195 (379)
T TIGR03402 129 LRAAIT---DDTALVSVMW-ANNETGTIFP----IEEIGEIAKERGALFHTDAVQA-VGKI----PIDLKEMNIDMLSLS 195 (379)
T ss_pred HHHhcC---CCcEEEEEEc-ccCCeeeccc----HHHHHHHHHHcCCEEEEECccc-cccc----ccCcccCCCCEEEEc
Confidence 998885 4678888888 8999998888 8999999999999999999997 5422 223334567999988
Q ss_pred --cccCCCccccEEEEEcHHHHHhhhcc---CCcccccccCCCCCCHHHHHHHHHHHHHHhh--cCHHHHHHHHHHHHHH
Q psy14484 271 --KGITGGYLPLSLVMTTDKIYNSIYYK---NNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDMKKITK 343 (430)
Q Consensus 271 --K~l~gG~~~ig~~~~~~~~~~~~~~~---~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~--~~~~~~~~~~~~~l~~ 343 (430)
| +.|. ..+|+++++++.. +.+. +........+ +.+..+..+..++++++.+ +...++.+++.+++++
T Consensus 196 ~~K-~~gp-~G~g~l~v~~~~~--~~p~~~g~~~~~~~~~g--t~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~ 269 (379)
T TIGR03402 196 GHK-LHGP-KGVGALYIRKGTR--FRPLLRGGHQERGRRAG--TENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEA 269 (379)
T ss_pred HHH-cCCC-CceEEEEECCCCC--CCCcccCCccCCCcCCC--CccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 9 5543 4589998887642 2110 0000001122 3355556666666766543 2334566667777777
Q ss_pred HHHc-hhcCCCeeeEe-ecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec------------------------
Q psy14484 344 ALTS-LITHPKIINFR-QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI------------------------ 397 (430)
Q Consensus 344 ~l~~-l~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~------------------------ 397 (430)
.|++ +.......... ....++.+.+. .. . ..++...|.++||.++.+
T Consensus 270 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~--~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~ 342 (379)
T TIGR03402 270 GLLARIPDARLNGDPTKRLPNTVNISFE-YI----E--GEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAA 342 (379)
T ss_pred HHHhhCCCEEEeCCCccCCCCEEEEEec-CC----C--HHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhc
Confidence 7764 32111111100 11223333333 21 1 256888888899998753
Q ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 398 GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 398 ~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.+.+|+++++.+|++||+++++.|+++++++
T Consensus 343 ~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~ 373 (379)
T TIGR03402 343 HGSIRFSLSRYNTEEDIDYVLEVLPPIIARL 373 (379)
T ss_pred CceEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2579999999999999999999999988753
No 165
>PRK07683 aminotransferase A; Validated
Probab=99.92 E-value=4.4e-22 Score=192.78 Aligned_cols=335 Identities=13% Similarity=0.090 Sum_probs=212.6
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhccc-cccCCCCCHHHHHHHHHHHhhcC--CCCC-eEEEcCCchHHHHH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEH-VMLSNLTHKPVIKLSEKLSSLTQ--YKLG-HCFYGSDGASAVEV 109 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~--~~~~-~v~~~~sgteA~~~ 109 (430)
..++||..+.. .++ .++.+.+++.+.+..... +....+..++++++++.+.+..+ ++++ +|++|+|+++|+..
T Consensus 28 ~~~i~l~~~~p--~~~-~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~ 104 (387)
T PRK07683 28 DNLISLTIGQP--DFP-TPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDI 104 (387)
T ss_pred CCeEEecCCCC--CCC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence 45788877732 233 367888999988764211 11223334566677777765443 3667 89999999999999
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC-CCCCCCCCChhHHHHHHH
Q psy14484 110 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD-SRNINKGNSANEIARCAI 188 (430)
Q Consensus 110 al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~ 188 (430)
+++.+.. +++.|++..++|.++.......+ .+...++.+. .+.. |.
T Consensus 105 ~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~g-------------~~~~~~~~~~~~~~~------------~~ 151 (387)
T PRK07683 105 AFRTILE--------PGTEVILPAPIYPGYEPIIRLCG-------------AKPVFIDTRSTGFRL------------TA 151 (387)
T ss_pred HHHHhCC--------CCCEEEEcCCCccchHHHHHHcC-------------CEEEEeecCcccCCC------------CH
Confidence 9887754 56789999999987644433221 1223333221 1111 56
Q ss_pred HHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccccc-ccCCCCCc--
Q psy14484 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFAC-EHAEIWPD-- 265 (430)
Q Consensus 189 ~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~-~~~~~~~d-- 265 (430)
+++++.+. .+++++++.. ++|++| ...+.+.+++|.++|+++|+++|+||+|..+...+..... ...+...+
T Consensus 152 ~~l~~~~~---~~~~~i~i~~-p~NPtG-~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi 226 (387)
T PRK07683 152 EALENAIT---EKTRCVVLPY-PSNPTG-VTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTI 226 (387)
T ss_pred HHHHHhcC---cCceEEEEeC-CCCCCC-cCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeE
Confidence 78888775 3566777766 788888 5667788999999999999999999999977443322111 11121112
Q ss_pred -eeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--hcCHHHHHHHHHHHH
Q psy14484 266 -FLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQDMKKI 341 (430)
Q Consensus 266 -~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~~~~l 341 (430)
+.+|||.++ .| +|+|++++++++++.+.. .......+.+.+++.++.+.|+... .+...++++++.+.+
T Consensus 227 ~~~s~SK~~~~pG-lRiG~i~~~~~l~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 299 (387)
T PRK07683 227 VINGLSKSHSMTG-WRIGFLFAPSYLAKHILK------VHQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDYV 299 (387)
T ss_pred EEeeccccccCcc-ceeEEEEcCHHHHHHHHH------HHHhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 337999998 57 899999999998887764 1111223345666666766664211 122334455566666
Q ss_pred HHHHHchhcCCCeeeEeecceEEEEE-EeecCCccchhHHHHHHHH-HHHCCcEEeec-------CCEEEEeCCCCCCHH
Q psy14484 342 TKALTSLITHPKIINFRQKGMIWAFD-VIIEDPEQIETFSKKFFVA-ALKNELLLRPI-------GNTVYLMPPYILNKN 412 (430)
Q Consensus 342 ~~~l~~l~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~a~~~~~~-l~~~Gv~~~~~-------~~~lR~~~~~~~t~e 412 (430)
.+.|+++ . +....+.|.++.+. +. .... . ...+... +.++||.+.|+ .+++|++.+ .+++
T Consensus 300 ~~~l~~~---~-~~~~~~~~~~~~~~~~~-~~~~-~---~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~--~~~~ 368 (387)
T PRK07683 300 YNRLISM---G-LDVEKPTGAFYLFPSIG-HFTM-S---SFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYA--YSIE 368 (387)
T ss_pred HHHHHHc---C-CcccCCCeeEEEEEecc-cCCC-C---HHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEec--CCHH
Confidence 6666543 2 22234555555443 33 2111 1 2356655 56779999885 268999766 4799
Q ss_pred HHHHHHHHHHHHHHH
Q psy14484 413 EIQHMTSAIFQTFNE 427 (430)
Q Consensus 413 ~i~~~~~~l~~~l~~ 427 (430)
++.+++++|.+.+.+
T Consensus 369 ~~~~al~~l~~~l~~ 383 (387)
T PRK07683 369 TLKEGLDRLEAFLQQ 383 (387)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998865
No 166
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.92 E-value=1.8e-22 Score=197.87 Aligned_cols=339 Identities=15% Similarity=0.137 Sum_probs=231.7
Q ss_pred CCEEEecccccccccCCC-CCHHHHHHHHHHHhhcccc-----ccCCCCCHHHHHHHHHHHhh--cCCCCCeEEEcCCch
Q psy14484 33 GKRYLDAISSWWVNLFGH-SNSYINKALKNQLNKLEHV-----MLSNLTHKPVIKLSEKLSSL--TQYKLGHCFYGSDGA 104 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~-----~~~~~~~~~~~~l~~~l~~~--~~~~~~~v~~~~sgt 104 (430)
....+||..++... .+ ....+.+++.+.+...... ....+..++++.+++.+... ..+.+++|++|+|..
T Consensus 88 ~~~~i~f~~g~p~~--~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q 165 (459)
T COG1167 88 DPSVIDFAGGLPDP--SLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQ 165 (459)
T ss_pred CCceecCCCCCCCc--ccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHH
Confidence 36788888775222 22 3345556666555432211 22234446667777777633 346778999999999
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHH
Q psy14484 105 SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA 184 (430)
Q Consensus 105 eA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (430)
+|+++.+++... +++.|++-+|+|++........+ . ..+++|.+..+.
T Consensus 166 ~al~l~~~~l~~--------pGd~v~vE~PtY~~~~~~~~~~g-------------~--~~~~vp~d~~G~--------- 213 (459)
T COG1167 166 QALDLLLRLLLD--------PGDTVLVEDPTYPGALQALEALG-------------A--RVIPVPVDEDGI--------- 213 (459)
T ss_pred HHHHHHHHHhCC--------CCCEEEEcCCCcHHHHHHHHHcC-------------C--cEEecCCCCCCC---------
Confidence 999999998876 78999999999998744333322 2 344555444444
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccc----ccccC
Q psy14484 185 RCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF----ACEHA 260 (430)
Q Consensus 185 ~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~----~~~~~ 260 (430)
|+++|++.++++ +++++.+.|..+|++| ...+.+--++|.++|++||+++|-|+.|+.+...+..- +.+..
T Consensus 214 --~~e~le~~~~~~--~~k~~y~~P~~qNPtG-~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~ 288 (459)
T COG1167 214 --DPEALEEALAQW--KPKAVYVTPTFQNPTG-VTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAP 288 (459)
T ss_pred --CHHHHHHHHhhc--CCcEEEECCCCCCCCC-CccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCC
Confidence 899999999853 7889999997888888 55666778999999999999999999999886554321 22222
Q ss_pred CCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHH------
Q psy14484 261 EIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRI------ 334 (430)
Q Consensus 261 ~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~------ 334 (430)
+...-+-||||.+..| +|+|++++++++++.+.. ..+..+..++.+.+.+....+. +..+.+++
T Consensus 289 ~rViy~gSFSK~l~Pg-lRlG~vv~p~~~~~~~~~------~k~~~~~~~s~~~Q~~la~~l~---~G~~~~hl~~lR~~ 358 (459)
T COG1167 289 GRVIYLGSFSKTLAPG-LRLGYVVAPPELIEKLLR------LKQAADLGPSSLSQAALAAFLL---SGHYDRHLRRLRRE 358 (459)
T ss_pred CCEEEEeeehhhcccc-cceeeeeCCHHHHHHHHH------HHHHhcCCCChHHHHHHHHHHH---cCCHHHHHHHHHHH
Confidence 3333455899999999 899999999999888765 4456667777777665554443 22333333
Q ss_pred -HHHHHHHHHHHHchhcCC-CeeeE-eecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEee-c---------CCEE
Q psy14484 335 -SQDMKKITKALTSLITHP-KIINF-RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP-I---------GNTV 401 (430)
Q Consensus 335 -~~~~~~l~~~l~~l~~~~-~~~~~-~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~-~---------~~~l 401 (430)
+++.+.+.+.|++. .+ ..... +..|+++++.+. .... +.++.+.++++|+.+.+ + .+.+
T Consensus 359 y~~rr~~l~~~L~~~--~~~~~~~~~p~gG~flwl~l~-~~~~-----~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~ 430 (459)
T COG1167 359 YARRRDALLEALAEY--LPELATWTRPEGGLFLWLELP-EGID-----ARELLAAALEKGVVVTPLGSAFSADGDPRNGL 430 (459)
T ss_pred HHHHHHHHHHHHHHh--CCCCeeeecCCceEEEEEEcC-CCCC-----HHHHHHHHHHCCCEEEcCCccccCCCCCCCeE
Confidence 33334444444333 22 33333 334788888887 4321 36799999999999998 2 2489
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 402 YLMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 402 R~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
|++++ ..+++++++.+++|.+++.+..
T Consensus 431 Rl~~s-~~~~e~i~~gi~~l~~~~~~~~ 457 (459)
T COG1167 431 RLSFS-SPSEEEIEEGIKRLAALLREAA 457 (459)
T ss_pred EEEcC-CCCHHHHHHHHHHHHHHHHHHh
Confidence 99877 4568999999999999987653
No 167
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.92 E-value=1e-22 Score=196.06 Aligned_cols=330 Identities=14% Similarity=0.099 Sum_probs=211.2
Q ss_pred EEEecccccccccCCCCCHHHHHHHHHHHh-hccccccCCC-CCHHHHHHHHHHHhhcC------CCCC-eEEEcCCchH
Q psy14484 35 RYLDAISSWWVNLFGHSNSYINKALKNQLN-KLEHVMLSNL-THKPVIKLSEKLSSLTQ------YKLG-HCFYGSDGAS 105 (430)
Q Consensus 35 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~-~~~~~~~~~~-~~~~~~~l~~~l~~~~~------~~~~-~v~~~~sgte 105 (430)
++|||.+| ...++.++|.+.+++.+..+ .........| ......++++.+++.+. .+.+ .+++++|..+
T Consensus 2 ~~I~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~ 79 (363)
T PF00155_consen 2 DVINLGSN--APLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQA 79 (363)
T ss_dssp TEEESSSS--STSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHH
T ss_pred CEEEEECC--CCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEeccccc
Confidence 47888887 55566667766666666544 1111111223 33345666666666664 5577 7888877777
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC--CCCCCCCCCChhHH
Q psy14484 106 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP--DSRNINKGNSANEI 183 (430)
Q Consensus 106 A~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 183 (430)
++..++.++.. .+++.|++.+|+|.++......... ....++.. ..+.
T Consensus 80 ~~~~~~~~~~~-------~~~~~vlv~~P~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~---------- 129 (363)
T PF00155_consen 80 ALFLLLRLLKI-------NPGDTVLVPDPCYPSYIEAARLLGA-------------EVIPVPLDSENDFH---------- 129 (363)
T ss_dssp HHHHHHHHHHS-------STTSEEEEEESSSTHHHHHHHHTTS-------------EEEEEEEEETTTTE----------
T ss_pred chhhhhhcccc-------cccccceecCCccccccccccccCc-------------eeeecccccccccc----------
Confidence 77777766631 1567899999999877444333221 12222211 1122
Q ss_pred HHHHHHHHHHHHHhC-CC--CeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccc-c-cc
Q psy14484 184 ARCAIFDLEILLKKN-HN--KIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-A-CE 258 (430)
Q Consensus 184 ~~~d~~~le~~l~~~-~~--~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~-~-~~ 258 (430)
.|+++|++.+++. .+ ++.++++.. ++|++| ...+.+.+++|.++|++|++++|+||+|.++......+ . ..
T Consensus 130 --~d~~~l~~~l~~~~~~~~~~~~v~~~~-p~nPtG-~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~ 205 (363)
T PF00155_consen 130 --LDPEALEEALDELPSKGPRPKAVLICN-PNNPTG-SVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRS 205 (363)
T ss_dssp --ETHHHHHHHHHTSHTTTETEEEEEEES-SBTTTT-BB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHG
T ss_pred --ccccccccccccccccccccceeeecc-cccccc-cccccccccchhhhhcccccceeeeeceeccccCCCccCcccc
Confidence 2899999999875 22 357777777 888999 56677889999999999999999999999764432211 1 11
Q ss_pred cCCCCCc---eeeeecccCC-CccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-----hcC
Q psy14484 259 HAEIWPD---FLCLSKGITG-GYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-----KDN 329 (430)
Q Consensus 259 ~~~~~~d---~~~~sK~l~g-G~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-----~~~ 329 (430)
...-.++ +-+|||.++. | +|+|++++++++.+.+.. ....+..+.+.+.++.+.+.... -+.
T Consensus 206 ~~~~~~~vi~~~S~SK~~g~~G-lRvG~i~~~~~~~~~l~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 276 (363)
T PF00155_consen 206 LLDEDDNVIVVGSLSKSFGLPG-LRVGYIVAPPELIERLRR--------FQRSGLSSSPMQAAAAAALSDPELVEKWLEE 276 (363)
T ss_dssp HHTTTSTEEEEEESTTTTTSGG-GTEEEEEEEHHHHHHHHH--------HHHHTTSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccceeeeeccccccccc-cccccccchhhhhhhhhh--------ccccccccchhhHHHHHhhhccccccccccc
Confidence 1222233 2378999974 6 899999999999888775 22333335555555555554221 133
Q ss_pred HHHHHHHHHHHHHHHHHchhcCCCeeeEeecceE-EEEEEeecCCccchhHHHHHHHHHHHC-CcEEeec-----CCEEE
Q psy14484 330 ILQRISQDMKKITKALTSLITHPKIINFRQKGMI-WAFDVIIEDPEQIETFSKKFFVAALKN-ELLLRPI-----GNTVY 402 (430)
Q Consensus 330 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~a~~~~~~l~~~-Gv~~~~~-----~~~lR 402 (430)
..++++++.+++.+.|++. .+....+.+.+ ++..+. .. .+.++++.|+++ ||.+.|+ .+++|
T Consensus 277 ~~~~l~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~-~~------~~~~l~~~L~~~~gi~v~pg~~~~~~~~iR 345 (363)
T PF00155_consen 277 LRERLRENRDLLREALEEI----GITVLPPEAGFFLWVRLD-PN------DAEELAQELLEEYGILVRPGSYFGVPGYIR 345 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHT----TSEEEHHSBSSEEEEEES-HH------HHHHHHHHHHHHHTEEEEEGGGGTSTTEEE
T ss_pred chhhHHHHHHHHHHHHHHh----hhheeeccCccEEEEEcc-cc------hHHHHHHHHHHhCCEEEEecCCCCCCCEEE
Confidence 4556666777777777654 33333333444 444444 21 246899999998 9999985 47999
Q ss_pred EeCCCCCCHHHHHHHHHHH
Q psy14484 403 LMPPYILNKNEIQHMTSAI 421 (430)
Q Consensus 403 ~~~~~~~t~e~i~~~~~~l 421 (430)
+++ ..++++++++++++|
T Consensus 346 i~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 346 ISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp EEG-GCSCHHHHHHHHHHH
T ss_pred EEe-ccCCHHHHHHHHhhC
Confidence 988 689999999999886
No 168
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.92 E-value=6e-23 Score=194.31 Aligned_cols=302 Identities=11% Similarity=0.015 Sum_probs=198.1
Q ss_pred ccCCC-CCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCC
Q psy14484 46 NLFGH-SNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFL 124 (430)
Q Consensus 46 ~~lG~-~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~ 124 (430)
++||. .||+++++..+++++++ +..+.+.++++.+++.++.+++++++++||++|+..++.++..
T Consensus 28 ~ylgl~~~~~~~~~~~~~~~~~~------g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~-------- 93 (346)
T TIGR03576 28 DLTGLAGGFKIDEEDLELLETYV------GPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEP-------- 93 (346)
T ss_pred ccccCCCChhHHHHHHHHHHHhc------CCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCC--------
Confidence 45666 59999999999988752 4568899999999999987779999999999999999988764
Q ss_pred CCcEEEEEcC--CCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCe
Q psy14484 125 NKKKFICLQN--SYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKI 202 (430)
Q Consensus 125 ~~~~vl~~~~--~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 202 (430)
+++.|+++.+ -+|.+........+. ..+.++ ++++++. . +++
T Consensus 94 ~gd~Vli~~~d~p~~~s~~~~~~l~ga--------------~~~~~~-----------------~l~~l~~-~----~~~ 137 (346)
T TIGR03576 94 PGRKVVHYLPEKPAHPSIPRSCKLAGA--------------EYFESD-----------------ELSELKK-I----DGT 137 (346)
T ss_pred CCCEEEECCCCCCCchhHHHHHHHcCC--------------EEeccC-----------------CHHHHhh-C----cCc
Confidence 5667776422 344443333333321 111111 4444332 1 345
Q ss_pred EEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCC--CcccccccccCCCCCce--eeeecccCCCcc
Q psy14484 203 AAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG--RTGKFFACEHAEIWPDF--LCLSKGITGGYL 278 (430)
Q Consensus 203 ~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g--~~g~~~~~~~~~~~~d~--~~~sK~l~gG~~ 278 (430)
++|++++ . ++.|.+ .+.+.|++|.++|+++|+++++||+|..+. ..|.. .....+ +|+ .+|||+++| +
T Consensus 138 ~lIiitg-~-s~~G~v-~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~-~~~~~~--~divv~s~SKalaG--~ 209 (346)
T TIGR03576 138 SLVVITG-S-TMDLKV-VSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQP-PALDLG--ADLVVTSTDKLMDG--P 209 (346)
T ss_pred eEEEEEC-C-CCCCcc-cCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCC-CHHHcC--CcEEEeccchhccc--c
Confidence 6677766 4 556644 346779999999999999999999997321 11211 111222 354 478998865 6
Q ss_pred ccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcCCCeeeEe
Q psy14484 279 PLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFR 358 (430)
Q Consensus 279 ~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~ 358 (430)
++|++++++++++.+.. ......++.+++.++++.++|+.+..+...+.++++.+.+.+.++.+ ... +
T Consensus 210 r~G~v~~~~~li~~l~~------~~~~~~~s~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~~~---~~~---~ 277 (346)
T TIGR03576 210 RGGLLAGRKELVDKIKS------VGEQFGLEAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDKL---NVE---R 277 (346)
T ss_pred ceEEEEeCHHHHHHHHH------hhcCcccCccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhC---CCC---c
Confidence 89999999999988876 11222333577788888888875433445566666766666666543 211 1
Q ss_pred ecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec------CCEEEEeCCCCCCHH---HHHHHHHHHHHHH
Q psy14484 359 QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI------GNTVYLMPPYILNKN---EIQHMTSAIFQTF 425 (430)
Q Consensus 359 ~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~------~~~lR~~~~~~~t~e---~i~~~~~~l~~~l 425 (430)
..+.|+++.+. ... . .+...+.|.++||.+.|+ ++++||++. ..++ +++.++++|++.+
T Consensus 278 ~~~~f~~~~~~-~~~--~---~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~--~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 278 TPTGFVIKGVE-EEK--L---IEIGLDLLRNYGIITITAVGMPGASKTLRFDLA--AKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred CCCeEEEEeCC-CCC--H---HHHHHHHHHhCCEEEeCCcccCCCCCeEEEEEe--cChHHhcCHHHHHHHHHhcc
Confidence 23346655554 210 1 134456667889999984 368999755 3333 7999999998764
No 169
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.92 E-value=3.5e-22 Score=193.55 Aligned_cols=334 Identities=12% Similarity=0.043 Sum_probs=211.5
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhcc--ccccCCCCCHHHHHHHHHHHhhcC--CCCC-eEEEcCCchHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLE--HVMLSNLTHKPVIKLSEKLSSLTQ--YKLG-HCFYGSDGASA 106 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~--~~~~-~v~~~~sgteA 106 (430)
.|..++||..|. ..++ .+|.+.+++.+.+.... .+....+..++++.+++.+.+.++ ...+ +|++|+|++++
T Consensus 27 ~~~~~~~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~ 103 (383)
T TIGR03540 27 EGVDVISLGIGD--PDLP-TPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEG 103 (383)
T ss_pred cCCCeEEeCCCC--CCCC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHH
Confidence 466788988873 4455 36788899888765421 111112233566677777765543 2445 68999999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 186 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (430)
+..+++++.. +++.|++.+|+|.++.......+. .+..++....... ..
T Consensus 104 l~~~~~~~~~--------~gd~vlv~~P~y~~~~~~~~~~G~-------------~v~~v~~~~~~g~----------~~ 152 (383)
T TIGR03540 104 IAHIPLAFVN--------PGDIVLVPDPGYPVYRIGTLFAGG-------------EPYEMPLKEENGF----------LP 152 (383)
T ss_pred HHHHHHHhCC--------CCCEEEEeCCCCcchHHHHHhcCC-------------EEEEEecCcccCC----------cc
Confidence 9999988764 678899999999887544333222 2223333211000 01
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccc-ccc-ccC---C
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FAC-EHA---E 261 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~-~~~-~~~---~ 261 (430)
|++++++.+. .+++++++.. ++|++| ..++.+.+++|.++|++||+++|+||+|..+...+.. ..+ ... .
T Consensus 153 d~~~l~~~~~---~~~~~v~i~~-P~NPtG-~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~ 227 (383)
T TIGR03540 153 DFDAIPEDIA---KKAKLMFINY-PNNPTG-AVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKD 227 (383)
T ss_pred CHHHHHhhcc---ccceEEEEeC-CCCCcC-ccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCccc
Confidence 7788887775 3567777776 778888 6678888999999999999999999999876543321 111 111 1
Q ss_pred CCCceeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--hcCHHHHHHHHH
Q psy14484 262 IWPDFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQDM 338 (430)
Q Consensus 262 ~~~d~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~~ 338 (430)
....+.+|||.++ .| +|+|++++++++++.+.. .......+.+.+.+.++.++|+... -+...+.++++.
T Consensus 228 ~~i~~~SfSK~~g~~G-lRiG~~i~~~~l~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 300 (383)
T TIGR03540 228 VGIEFHSLSKTYNMTG-WRIGMAVGNADLIAGLGK------VKTNVDSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRR 300 (383)
T ss_pred CEEEEEecccccCCcc-ceeeEEeCCHHHHHHHHH------HHHhcccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 1233458999996 46 899999999999887764 1111223445566666666664211 022344455556
Q ss_pred HHHHHHHHchhcCCCeeeEeecce-EEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec-------CCEEEEeCCCCC
Q psy14484 339 KKITKALTSLITHPKIINFRQKGM-IWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------GNTVYLMPPYIL 409 (430)
Q Consensus 339 ~~l~~~l~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~-------~~~lR~~~~~~~ 409 (430)
+.+.+.|++. . +....+.|. ++++.+. +.. . +.++++.|+ ++||.+.++ .+++||+++ .
T Consensus 301 ~~~~~~L~~~---~-~~~~~~~~~~~~~~~l~-~~~--~---~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~--~ 368 (383)
T TIGR03540 301 DLLLEALKKI---G-IDVEKPKATFYVWVPVP-EGY--T---SAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLT--V 368 (383)
T ss_pred HHHHHHHHhC---C-CEecCCCcceEEEEECC-CCC--C---HHHHHHHHHHHCCEEEecchhhCccCCCeEEEEec--C
Confidence 6666666543 2 222333444 4556554 321 1 356888875 679999975 257999775 5
Q ss_pred CHHHHHHHHHHHHH
Q psy14484 410 NKNEIQHMTSAIFQ 423 (430)
Q Consensus 410 t~e~i~~~~~~l~~ 423 (430)
+++++.+.+++|++
T Consensus 369 ~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 369 PDERLEEAVARIKK 382 (383)
T ss_pred CHHHHHHHHHHHhh
Confidence 78888888888764
No 170
>PRK08912 hypothetical protein; Provisional
Probab=99.92 E-value=3.8e-22 Score=193.43 Aligned_cols=337 Identities=9% Similarity=0.054 Sum_probs=214.6
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhc-cccccCCCCCHHHHHHHHHHHhhcC--CCCC-eEEEcCCchHHHHH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKL-EHVMLSNLTHKPVIKLSEKLSSLTQ--YKLG-HCFYGSDGASAVEV 109 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~-~v~~~~sgteA~~~ 109 (430)
...+||..|.. .++ .+|.+.+++.+.+... ..+....+..++++.+++.+.+.++ .+++ +|++|+|+++|+..
T Consensus 26 ~~~i~l~~g~p--~~~-~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~ 102 (387)
T PRK08912 26 HGAINLGQGFP--DDP-GPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAA 102 (387)
T ss_pred CCeEEccCCCC--CCC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHH
Confidence 46788888753 344 3678888888766432 1122222334566777777765543 4666 89999999999998
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC-CCCCCCCCChhHHHHHHH
Q psy14484 110 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD-SRNINKGNSANEIARCAI 188 (430)
Q Consensus 110 al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~ 188 (430)
++..... +++.|++.+++|..+.......+ .....++.+. .+.. |+
T Consensus 103 ~~~~~~~--------~gd~Vlv~~p~y~~~~~~~~~~g-------------~~~~~~~~~~~~~~~------------~~ 149 (387)
T PRK08912 103 ALLALVE--------PGDEVVLFQPLYDAYLPLIRRAG-------------GVPRLVRLEPPHWRL------------PR 149 (387)
T ss_pred HHHHhcC--------CCCEEEEeCCCchhhHHHHHHcC-------------CEEEEEecCcccCcC------------CH
Confidence 8887754 56789999999987644332211 2223344332 1221 77
Q ss_pred HHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccc-c-cccCCCCC--
Q psy14484 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-A-CEHAEIWP-- 264 (430)
Q Consensus 189 ~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~-~-~~~~~~~~-- 264 (430)
+++++.+. ++++++++.. ++|++| ...+.+.+++|.++|++|++++|+||+|..+...+... . ....+...
T Consensus 150 ~~l~~~~~---~~~~~v~l~~-p~NPtG-~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 224 (387)
T PRK08912 150 AALAAAFS---PRTKAVLLNN-PLNPAG-KVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERT 224 (387)
T ss_pred HHHHHHhC---ccceEEEEeC-CCCCcC-cccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCce
Confidence 88888875 3566666666 788888 55667889999999999999999999998664433211 1 11112211
Q ss_pred -ceeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--hcCHHHHHHHHHHH
Q psy14484 265 -DFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQDMKK 340 (430)
Q Consensus 265 -d~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~~~~ 340 (430)
-+.+|||.++ .| +|+|++++++++++.+.. .....+++.++....++.+.+...+ -++..++++++.+.
T Consensus 225 i~~~S~SK~~g~~G-lRiG~~~~~~~~~~~l~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 297 (387)
T PRK08912 225 VKIGSAGKIFSLTG-WKVGFVCAAPPLLRVLAK------AHQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRADLARSRDR 297 (387)
T ss_pred EEEeechhhccCcC-ceeEEEecCHHHHHHHHH------HHhhccccCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 2337899998 67 899999999999887765 1122335555555555555553110 12345566666667
Q ss_pred HHHHHHchhcCCCeeeEeecce-EEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec---------CCEEEEeCCCCC
Q psy14484 341 ITKALTSLITHPKIINFRQKGM-IWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI---------GNTVYLMPPYIL 409 (430)
Q Consensus 341 l~~~l~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~---------~~~lR~~~~~~~ 409 (430)
+.+.|+.. + +....+.|. ++++.+. ....... ..++++.|+ ++||.+.|+ .+++|++++ .
T Consensus 298 l~~~L~~~---g-~~~~~~~g~~~l~~~l~-~~~~~~~--~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~--~ 368 (387)
T PRK08912 298 LAAGLRRI---G-FPVLPSQGTYFLTVDLA-PLGLAED--DVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFA--K 368 (387)
T ss_pred HHHHHHhC---C-CcccCCCcceEEEeccc-ccCCCCC--HHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEe--C
Confidence 77766654 2 222334444 4555554 3111011 356888875 579998874 257899766 4
Q ss_pred CHHHHHHHHHHHHHHHHH
Q psy14484 410 NKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 410 t~e~i~~~~~~l~~~l~~ 427 (430)
.++++++++++|++++.+
T Consensus 369 ~~~~l~~~l~rl~~~l~~ 386 (387)
T PRK08912 369 RDATLDEAVERLAAARRR 386 (387)
T ss_pred CHHHHHHHHHHHHHHHhc
Confidence 689999999999988753
No 171
>PRK07550 hypothetical protein; Provisional
Probab=99.92 E-value=3.6e-22 Score=193.53 Aligned_cols=338 Identities=12% Similarity=0.027 Sum_probs=212.9
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhccc--cccCCCCCHHHHHHHHHHHhhcC--CCCCeEEEcCCchHHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEH--VMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAV 107 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgteA~ 107 (430)
.|...+||.++.. .+. .++.+.+++.+.+..... +....+..++++.+++.+.+..+ ..+++|++|+|+++|+
T Consensus 27 ~~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 103 (386)
T PRK07550 27 ADGPLIDLSQAVP--GYP-PPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAF 103 (386)
T ss_pred cCCCeEEeCCCCC--CCC-CCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHH
Confidence 3566899988743 222 367788888876643211 11222344566777777776543 4568999999999999
Q ss_pred HHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHH
Q psy14484 108 EVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCA 187 (430)
Q Consensus 108 ~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 187 (430)
..++++++. +++.|++.+|+|.++...... ...+...++....... ..|
T Consensus 104 ~~~~~~l~~--------~gd~Vlv~~p~y~~~~~~~~~-------------~g~~~~~v~~~~~~~~----------~~~ 152 (386)
T PRK07550 104 WAAMVTLAG--------AGDEVILPLPWYFNHKMWLDM-------------LGIRPVYLPCDEGPGL----------LPD 152 (386)
T ss_pred HHHHHHhcC--------CCCEEEEcCCCCcchHHHHHh-------------cCCEEEEEecCCCcCC----------CCC
Confidence 999888764 677899999999776432221 1122233433211110 017
Q ss_pred HHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc-cc-ccccCCC---
Q psy14484 188 IFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-FF-ACEHAEI--- 262 (430)
Q Consensus 188 ~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~-~~-~~~~~~~--- 262 (430)
++++++.+++ +++++++.. ++|++| ...+.+.+++|.++|+++|+++|+||+|.+|...+. .. .+...+.
T Consensus 153 ~~~l~~~~~~---~~~~v~~~~-P~NPtG-~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~ 227 (386)
T PRK07550 153 PAAAEALITP---RTRAIALVT-PNNPTG-VVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDT 227 (386)
T ss_pred HHHHHHHhcc---cCcEEEEeC-CCCCCC-cccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCcccc
Confidence 7889988863 455555555 667888 456788899999999999999999999987733221 11 1111111
Q ss_pred CCceeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh--cCHHHHHHHHHH
Q psy14484 263 WPDFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDMK 339 (430)
Q Consensus 263 ~~d~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~--~~~~~~~~~~~~ 339 (430)
...+.+|||.++ .| +|+|++++++++++.+.. .....+.+.+.+++.++...++.+++ +...+.++++.+
T Consensus 228 ~i~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~------~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 300 (386)
T PRK07550 228 LVHLYSFSKSYALTG-HRVGAVVASPARIAEIEK------FMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRD 300 (386)
T ss_pred EEEEecchhhccCcc-cceEeeecCHHHHHHHHH------HHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 123458999997 56 799999999988877765 22334445566777666666653221 223445566666
Q ss_pred HHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec-------CCEEEEeCCCCCCH
Q psy14484 340 KITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------GNTVYLMPPYILNK 411 (430)
Q Consensus 340 ~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~-------~~~lR~~~~~~~t~ 411 (430)
.+.+.|+.. +.+...+..|.+.++.+. .... . +.++++.|+ ++||.+.|+ .+++|++++ ..++
T Consensus 301 ~l~~~L~~~---~~~~~~~~g~~~~~~~~~-~~~~-~---~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~-~~~~ 371 (386)
T PRK07550 301 AFRAVFARL---PGWELLASGAYFAYVRHP-FPDR-P---SREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFA-NADV 371 (386)
T ss_pred HHHHHHHhC---CCceeCCCceEEEEecCC-CCCC-C---HHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEee-cCCH
Confidence 666666543 222212223445555554 3111 1 357888865 579999884 358999876 3578
Q ss_pred HHHHHHHHHHHHH
Q psy14484 412 NEIQHMTSAIFQT 424 (430)
Q Consensus 412 e~i~~~~~~l~~~ 424 (430)
+++++++++|.+.
T Consensus 372 ~~~~~~~~~l~~~ 384 (386)
T PRK07550 372 AGIGELVERLRAF 384 (386)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999764
No 172
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.92 E-value=3.9e-22 Score=194.16 Aligned_cols=343 Identities=13% Similarity=0.105 Sum_probs=219.5
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhcc-ccccCCCCCHHHHHHHHHHHhhcCC--CCCeEEEcCCchHHHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLE-HVMLSNLTHKPVIKLSEKLSSLTQY--KLGHCFYGSDGASAVE 108 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~v~~~~sgteA~~ 108 (430)
.|.+++|+..|. ..++ .+|.+.+++.+.+.... .+....+..++++++++.+.+.++. .+++|++|+|+++|+.
T Consensus 31 ~~~~~i~l~~g~--p~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 107 (402)
T PRK06107 31 AGRSIVDLTVGE--PDFD-TPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIF 107 (402)
T ss_pred ccCCEEEcCCCC--CCCC-CCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHH
Confidence 356788988774 3344 37888999888776421 1222234446778888888777653 5678999999999999
Q ss_pred HHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHH
Q psy14484 109 VALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAI 188 (430)
Q Consensus 109 ~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 188 (430)
.+++.... +++.|++.+++|.++......... ....++.+...... -|+
T Consensus 108 ~~~~~~~~--------~gd~vl~~~p~y~~y~~~~~~~~~-------------~~~~v~~~~~~~~~----------~~~ 156 (402)
T PRK06107 108 LALMATLE--------AGDEVIIPAPYWVSYPDMVLANDG-------------TPVIVACPEEQGFK----------LTP 156 (402)
T ss_pred HHHHHhcC--------CCCEEEEecCCCcCHHHHHHHcCC-------------EEEEecCCcccCCC----------CCH
Confidence 99886543 568899999998877433322111 11223322111100 167
Q ss_pred HHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhc-CCEEEEeccccCCCCcccccc-c-cc-CCCCC
Q psy14484 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNY-NIHLIADEIAVGCGRTGKFFA-C-EH-AEIWP 264 (430)
Q Consensus 189 ~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~-gi~li~DEv~~g~g~~g~~~~-~-~~-~~~~~ 264 (430)
+++++.+. .+++++++.. ++|++| ..++.+.+++|.++|++| ++++|+||+|..+...+..+. + .. .+...
T Consensus 157 ~~l~~~~~---~~~~~v~l~~-p~NPtG-~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~ 231 (402)
T PRK06107 157 EALEAAIT---PRTRWLILNA-PSNPTG-AVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRD 231 (402)
T ss_pred HHHHhhcC---cCceEEEEEC-CCCCCC-cCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccC
Confidence 88888775 3556566655 677888 677788899999999998 999999999987654442211 1 11 11222
Q ss_pred cee---eeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCH----HHHHHH
Q psy14484 265 DFL---CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNI----LQRISQ 336 (430)
Q Consensus 265 d~~---~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~----~~~~~~ 336 (430)
.++ +|||.++ .| +|+|++++++++.+.+.. .....+++.+.+++.++..+|+. .+.+ .+.+++
T Consensus 232 ~vi~~~S~SK~~~~pG-lRiG~~~~~~~~~~~~~~------~~~~~~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~ 302 (402)
T PRK06107 232 RVLVTNGVSKTYAMTG-WRIGYAAGPADLIAAINK------LQSQSSSCPSSISQAAAAAALNG--DQSFVTESVAVYKQ 302 (402)
T ss_pred CEEEEeccchhhcCcc-cceeeeecCHHHHHHHHH------HHHhcccCCChHHHHHHHHHhcC--ChHHHHHHHHHHHH
Confidence 333 5799997 57 899999999999887765 23334566788888877777741 1223 334455
Q ss_pred HHHHHHHHHHchhcCCCeeeEeecceEE-EEEEeecC--C--ccc--hhHHHHHHHHH-HHCCcEEeec-----CCEEEE
Q psy14484 337 DMKKITKALTSLITHPKIINFRQKGMIW-AFDVIIED--P--EQI--ETFSKKFFVAA-LKNELLLRPI-----GNTVYL 403 (430)
Q Consensus 337 ~~~~l~~~l~~l~~~~~~~~~~~~g~~~-~~~~~~~~--~--~~~--~~~a~~~~~~l-~~~Gv~~~~~-----~~~lR~ 403 (430)
+.+.+.+.|+++ +++....+.|.++ ++.+. .- . ... ......+++.+ .++||.+.|+ .+++|+
T Consensus 303 ~~~~~~~~L~~~---~g~~~~~p~gg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRi 378 (402)
T PRK06107 303 RRDYALALLNAI---PGLSCLVPDGAFYLYVNCA-GLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRL 378 (402)
T ss_pred HHHHHHHHHhcC---CCCcccCCCcceEEeeecc-cccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEE
Confidence 555555555543 3333334455554 44442 10 0 000 00124566555 5679999986 267899
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 404 MPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 404 ~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+.+ .+++++++++++|.+.+.++
T Consensus 379 s~~--~~~e~l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 379 SIA--TSLETLEEACARIERAVAAL 401 (402)
T ss_pred EeC--CCHHHHHHHHHHHHHHHHhc
Confidence 766 57999999999999998876
No 173
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.92 E-value=4.3e-22 Score=193.43 Aligned_cols=333 Identities=12% Similarity=0.043 Sum_probs=210.0
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhcc--ccccCCCCCHHHHHHHHHHHhhcC--CCCC-eEEEcCCchHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLE--HVMLSNLTHKPVIKLSEKLSSLTQ--YKLG-HCFYGSDGASA 106 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~--~~~~-~v~~~~sgteA 106 (430)
.|..++||..+ ++.+..++++.+++.+.+.... .+..+.+..++++++++.+.+.++ .+++ .+++|+|+++|
T Consensus 33 ~g~~~i~l~~g---~p~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~a 109 (394)
T PRK05942 33 QGLDLIDLGMG---NPDGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEG 109 (394)
T ss_pred cCCCeEEcCCC---CCCCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHH
Confidence 35678998775 3333345678887777664321 111122333566777777766544 3566 58899999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC--CCCCCCCCChhHHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD--SRNINKGNSANEIA 184 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 184 (430)
+..++.+++. +++.|++.+|+|.++.......+ .+...++.+. .+..
T Consensus 110 l~~~~~~~~~--------~gd~Vlv~~P~y~~~~~~~~~~g-------------~~~~~v~~~~~~~~~~---------- 158 (394)
T PRK05942 110 LTHLALAYVN--------PGDVVLVPSPAYPAHFRGPLIAG-------------AQIYPIILKPENDWLI---------- 158 (394)
T ss_pred HHHHHHHhCC--------CCCEEEEcCCCCcchHHHHHHcC-------------CEEEEeecCCccCCcc----------
Confidence 9999887754 67889999999988644332211 1222333221 1111
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccc-cc---ccc-
Q psy14484 185 RCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FA---CEH- 259 (430)
Q Consensus 185 ~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~-~~---~~~- 259 (430)
|++++++.+. ++++++++.. ++|++| ...+.+.+++|.++|+++|+++|+||+|..+...+.. .. +..
T Consensus 159 --d~~~l~~~~~---~~~k~i~l~~-P~NPtG-~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~ 231 (394)
T PRK05942 159 --DLSSIPEEVA---QQAKILYFNY-PSNPTT-ATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGA 231 (394)
T ss_pred --CHHHHHHhcc---ccceEEEEcC-CCCCCC-CcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCc
Confidence 7888888775 4677777776 788888 6677888999999999999999999999876543321 11 111
Q ss_pred CCCCCceeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh--cCHHHHHHH
Q psy14484 260 AEIWPDFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQ 336 (430)
Q Consensus 260 ~~~~~d~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~--~~~~~~~~~ 336 (430)
.+....+.+|||.++ .| +|+|++++++++++.+.. ......++.+.+++.++.++|+..+. +...+++++
T Consensus 232 ~~~~i~~~SfSK~~~~~G-lRiG~i~~~~~l~~~l~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 304 (394)
T PRK05942 232 KDIGVEFHTLSKTYNMAG-WRVGFVVGNRHIIQGLRT------LKTNLDYGIFSALQKAAETALQLPDSYLQQVQERYRT 304 (394)
T ss_pred cccEEEEecchhccCChh-hheeeeecCHHHHHHHHH------HHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 112233457999986 46 899999999999888765 11222445566666666666653211 234455566
Q ss_pred HHHHHHHHHHchhcCCCeeeEeecce-EEEEEEeecCCccchhHHHHHHHH-HHHCCcEEeec-------CCEEEEeCCC
Q psy14484 337 DMKKITKALTSLITHPKIINFRQKGM-IWAFDVIIEDPEQIETFSKKFFVA-ALKNELLLRPI-------GNTVYLMPPY 407 (430)
Q Consensus 337 ~~~~l~~~l~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~a~~~~~~-l~~~Gv~~~~~-------~~~lR~~~~~ 407 (430)
+.+++.+.|+++ + +...++.|. ++++.+. .... ..++.+. +.++||.+.++ .+++|++++
T Consensus 305 ~~~~~~~~L~~~---~-~~~~~~~~~~f~~~~~~-~~~~-----~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~- 373 (394)
T PRK05942 305 RRDFLIQGLGEL---G-WNIPPTKATMYLWVPCP-VGMG-----STDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLI- 373 (394)
T ss_pred HHHHHHHHHHHC---C-CeecCCCeeeEEEEECC-CCCC-----HHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEec-
Confidence 666666666543 2 222334455 5556654 3211 2346554 45789999874 268999875
Q ss_pred CCCHHHHHHHHHHHHHH
Q psy14484 408 ILNKNEIQHMTSAIFQT 424 (430)
Q Consensus 408 ~~t~e~i~~~~~~l~~~ 424 (430)
.+.+.+.+.+++|.++
T Consensus 374 -~~~~~l~~~l~~l~~~ 389 (394)
T PRK05942 374 -ADCDRLGEALDRLKQA 389 (394)
T ss_pred -CCHHHHHHHHHHHHHh
Confidence 4566677777776553
No 174
>PLN02656 tyrosine transaminase
Probab=99.92 E-value=9.4e-22 Score=191.70 Aligned_cols=344 Identities=17% Similarity=0.110 Sum_probs=211.9
Q ss_pred CCCEEEecccccccccC-CCCCHHHHHHHHHHHhhcc--ccccCCCCCHHHHHHHHHHHhhcC--CCCCeEEEcCCchHH
Q psy14484 32 SGKRYLDAISSWWVNLF-GHSNSYINKALKNQLNKLE--HVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASA 106 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~l-G~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgteA 106 (430)
.|+.+++|..|...... -..++.+++++.+.+.... .+....+..++++.+++.+.+..+ .++++|++|+|+++|
T Consensus 29 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a 108 (409)
T PLN02656 29 NGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQA 108 (409)
T ss_pred cCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHH
Confidence 67889998776432111 2357889999988776521 111222334555666666665433 467899999999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC-C-CCCCCCCCChhHHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP-D-SRNINKGNSANEIA 184 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~ 184 (430)
+..++.+++. +++.|++.+++|..+.......+ .....++.. . .+..
T Consensus 109 l~~~~~~l~~--------~gd~Vlv~~p~y~~~~~~~~~~g-------------~~~~~i~~~~~~~~~~---------- 157 (409)
T PLN02656 109 IDVALSMLAR--------PGANILLPRPGFPIYELCAAFRH-------------LEVRYVDLLPEKGWEV---------- 157 (409)
T ss_pred HHHHHHHHhC--------CCCeEEEeCCCCCcHHHHHHHcC-------------CEEEEEeCCCcCCCCC----------
Confidence 9999988764 66789999999976533322211 122333331 1 1112
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccc-ccccCCCC
Q psy14484 185 RCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-ACEHAEIW 263 (430)
Q Consensus 185 ~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~-~~~~~~~~ 263 (430)
|++++++.+. .++.++++.. ++|++| ...+.+.+++|.++|+++|+++|+||+|.++...+..+ .....+-.
T Consensus 158 --d~~~l~~~~~---~~~~~v~l~~-P~NPtG-~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 230 (409)
T PLN02656 158 --DLDAVEALAD---QNTVALVIIN-PGNPCG-NVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSI 230 (409)
T ss_pred --CHHHHHHHhc---cCceEEEEEC-CCCCCC-CCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhccc
Confidence 7888888875 3345555555 567788 55677889999999999999999999999875544321 11111111
Q ss_pred ---CceeeeecccCC-CccccEEEEEc--------HHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh---c
Q psy14484 264 ---PDFLCLSKGITG-GYLPLSLVMTT--------DKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK---D 328 (430)
Q Consensus 264 ---~d~~~~sK~l~g-G~~~ig~~~~~--------~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~---~ 328 (430)
.-+-+|||.++. | +|+|+++++ +++++.+.. . .....+.+.+++.++.++|+...+ .
T Consensus 231 ~~vi~~~SfSK~f~~pG-lRiG~~i~~~~~~~~~~~~~~~~~~~------~-~~~~~~~s~~~q~a~~~~l~~~~~~~~~ 302 (409)
T PLN02656 231 VPVLTLGSLSKRWIVPG-WRLGWFVTTDPSGSFRDPKIVERIKK------Y-FDILGGPATFIQAAVPTILEQTDESFFK 302 (409)
T ss_pred CcEEEEcccchhccCcc-eeEEEEEEeCcccccccHHHHHHHHH------H-HhhhcCCCHHHHHHHHHHHhcCcHHHHH
Confidence 123379998544 6 899999984 467666654 1 111224567778777777752111 1
Q ss_pred CHHHHHHHHHHHHHHHHHchhcCCCee-eEeecc-eEEEEEEeecCCcc-chhHHHHHHHHHHHCCcEEeec-----CCE
Q psy14484 329 NILQRISQDMKKITKALTSLITHPKII-NFRQKG-MIWAFDVIIEDPEQ-IETFSKKFFVAALKNELLLRPI-----GNT 400 (430)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~l~~~~~~~-~~~~~g-~~~~~~~~~~~~~~-~~~~a~~~~~~l~~~Gv~~~~~-----~~~ 400 (430)
...+.++++.+.+.+.|+.+ +... ..++.| .++++.+. ..... ..+....+.+.+.++||.+.|+ .++
T Consensus 303 ~~~~~~~~~r~~~~~~L~~~---~~~~~~~~p~gg~~~w~~l~-~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~ 378 (409)
T PLN02656 303 KTINILKQSSDICCDRIKEI---PCITCPHKPEGSMAVMVKLN-LSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNW 378 (409)
T ss_pred HHHHHHHHHHHHHHHHHhhC---CCCcCCcCCCeEEEEEEecc-hhhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCe
Confidence 22334455555555555543 3221 123444 55555553 21100 0000123456677889999986 268
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 401 VYLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 401 lR~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
+|++++ .+++++++.+++|++++.+
T Consensus 379 iRi~~~--~~~e~l~eal~rl~~~~~~ 403 (409)
T PLN02656 379 LRITFA--ADPSSLEEALGRIKSFYLR 403 (409)
T ss_pred EEEEeC--CCHHHHHHHHHHHHHHHHH
Confidence 999777 4799999999999998864
No 175
>PRK09082 methionine aminotransferase; Validated
Probab=99.92 E-value=2.9e-22 Score=194.08 Aligned_cols=333 Identities=11% Similarity=0.078 Sum_probs=214.7
Q ss_pred CCEEEecccccccccCCCCCHHHHHHHHHHHhhccc-cccCCCCCHHHHHHHHHHHhhcCCC--CC-eEEEcCCchHHHH
Q psy14484 33 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEH-VMLSNLTHKPVIKLSEKLSSLTQYK--LG-HCFYGSDGASAVE 108 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~--~~-~v~~~~sgteA~~ 108 (430)
+..++||..|. ..++ .+|.+.+++.+.+..... +....+..++++.+++.+.+.++.. ++ ++++|+|+++|+.
T Consensus 29 ~~~~i~l~~g~--~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~ 105 (386)
T PRK09082 29 EHGAINLSQGF--PDFD-GPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALF 105 (386)
T ss_pred hCCEEEecCCC--CCCC-CCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHH
Confidence 34678988773 3343 478888998887754321 1222334467788888888776543 33 7999999999999
Q ss_pred HHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC-CCCCCCCCChhHHHHHH
Q psy14484 109 VALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD-SRNINKGNSANEIARCA 187 (430)
Q Consensus 109 ~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d 187 (430)
.++...+. +++.|++.+++|.++.......+ .....++... .+. .|
T Consensus 106 ~~~~~~~~--------~gd~Vli~~p~y~~~~~~~~~~g-------------~~~~~~~~~~~~~~------------~d 152 (386)
T PRK09082 106 AAILALVR--------PGDEVIVFDPSYDSYAPAIELAG-------------GRAVRVALQPPDFR------------VD 152 (386)
T ss_pred HHHHHHcC--------CCCEEEEeCCCchhhHHHHHHcC-------------CEEEEEecCccccc------------CC
Confidence 99987764 66889999999987643332211 1223333321 111 17
Q ss_pred HHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccc--cccccCCCCCc
Q psy14484 188 IFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF--FACEHAEIWPD 265 (430)
Q Consensus 188 ~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~--~~~~~~~~~~d 265 (430)
++++++.++ ++++++++.. ++|++| ..++++.+++|.++|++||+++|+||+|..+...+.. ......+....
T Consensus 153 ~~~l~~~~~---~~~~~v~l~~-p~NPtG-~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~ 227 (386)
T PRK09082 153 WQRFAAAIS---PRTRLIILNT-PHNPSG-TVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRER 227 (386)
T ss_pred HHHHHHhcC---ccceEEEEeC-CCCCCC-cCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCc
Confidence 888888885 4567777777 788888 5557788999999999999999999999876443321 11122222222
Q ss_pred ---eeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--hcCHHHHHHHHHH
Q psy14484 266 ---FLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQDMK 339 (430)
Q Consensus 266 ---~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~~~ 339 (430)
+.+|||.++ .| +|+|++++++++++.+.. ......++.+.+++.++.+.++... ...+.+.++++.+
T Consensus 228 ~i~~~S~SK~~~~~G-~RiG~iv~~~~l~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 300 (386)
T PRK09082 228 AFVVSSFGKTYHVTG-WKVGYCVAPAALSAEFRK------VHQYNTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRD 300 (386)
T ss_pred EEEEeechhhccchh-hhhhhhhCCHHHHHHHHH------HHhhhcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Confidence 337999996 46 899999999999888765 2223455667777776665554110 1123344556666
Q ss_pred HHHHHHHchhcCCCeeeEeecceE-EEEEEeecCCccchhHHHHHHHHH-HHCCcEEeec---------CCEEEEeCCCC
Q psy14484 340 KITKALTSLITHPKIINFRQKGMI-WAFDVIIEDPEQIETFSKKFFVAA-LKNELLLRPI---------GNTVYLMPPYI 408 (430)
Q Consensus 340 ~l~~~l~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~a~~~~~~l-~~~Gv~~~~~---------~~~lR~~~~~~ 408 (430)
.+.+.|+.. .+...++.|.+ +++.+. .-.. .. ..++++.| .+.||.+.|+ .+++|++.+
T Consensus 301 ~~~~~L~~~----~~~~~~~~g~~~~~~~~~-~~~~-~~--~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~-- 370 (386)
T PRK09082 301 RFRAALANS----RFKLLPCEGTYFQLVDYS-AISD-LD--DVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFA-- 370 (386)
T ss_pred HHHHHHHhC----CCcccCCCeeEEEEEecc-ccCC-CC--HHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEec--
Confidence 666666543 12223344554 445554 2111 11 35788876 5779998874 157888765
Q ss_pred CCHHHHHHHHHHHHH
Q psy14484 409 LNKNEIQHMTSAIFQ 423 (430)
Q Consensus 409 ~t~e~i~~~~~~l~~ 423 (430)
.+++++++.+++|++
T Consensus 371 ~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 371 KQEETLDAAAERLCQ 385 (386)
T ss_pred CCHHHHHHHHHHHhh
Confidence 478999999999874
No 176
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.92 E-value=2.8e-22 Score=193.59 Aligned_cols=323 Identities=12% Similarity=0.027 Sum_probs=204.9
Q ss_pred CCCHHHHHHHHHHHhhcccccc-CCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcE
Q psy14484 50 HSNSYINKALKNQLNKLEHVML-SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKK 128 (430)
Q Consensus 50 ~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~ 128 (430)
+.+|++++++.+++........ ........++++++++++++.+.+.+++++||++|+..+++.++... ..++++
T Consensus 31 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~----~~~~~~ 106 (371)
T PRK13520 31 EPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLA----KAEKPN 106 (371)
T ss_pred CchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhc----cCCCce
Confidence 5789999999988865321111 11222444789999999997665678999999999999998886531 013467
Q ss_pred EEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEc
Q psy14484 129 FICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIE 208 (430)
Q Consensus 129 vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~e 208 (430)
|++.+.++..+... . .....+...++.+.+... |+++|++.+++ ++.++++.
T Consensus 107 vl~~~~~h~s~~~~-~------------~~~g~~~~~v~~~~~~~~------------d~~~l~~~i~~---~~~~vi~~ 158 (371)
T PRK13520 107 IVVPESAHFSFDKA-A------------DMLGVELRRAPLDDDYRV------------DVKAVEDLIDD---NTIGIVGI 158 (371)
T ss_pred EEecCcchHHHHHH-H------------HHcCceEEEecCCCCCcC------------CHHHHHHHHhh---CCEEEEEE
Confidence 77766554322111 1 111223344544432222 88999999963 45555555
Q ss_pred cccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCC----CcccccccccCCCCCceeeee--cccCCCccccEE
Q psy14484 209 PLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG----RTGKFFACEHAEIWPDFLCLS--KGITGGYLPLSL 282 (430)
Q Consensus 209 p~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g----~~g~~~~~~~~~~~~d~~~~s--K~l~gG~~~ig~ 282 (430)
. +++++|.+.| +++|.++|+++|+++|+||+|+++. +.+..+.... ...|.+++| |...++ .|+|+
T Consensus 159 ~-~~~~tG~~~~----l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~--~~vd~~~~s~~K~~~a~-~~~G~ 230 (371)
T PRK13520 159 A-GTTELGQVDP----IPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSL--PGVDSITIDPHKMGLAP-IPAGG 230 (371)
T ss_pred c-CCcCCcccCC----HHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccC--CCCceEEECCccccCcc-CCceE
Confidence 5 5677898887 9999999999999999999998552 1111112111 234666554 543334 68988
Q ss_pred EEEc-HHHHHhhhccCC----cccccccCCCCCCHHHHHHHHHHHHHHhhc---CHHHHHHHHHHHHHHHHHchhcCCCe
Q psy14484 283 VMTT-DKIYNSIYYKNN----INIFLHSHSYSGNPLACCAALATLEIFNKD---NILQRISQDMKKITKALTSLITHPKI 354 (430)
Q Consensus 283 ~~~~-~~~~~~~~~~~~----~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~ 354 (430)
++.+ +++.+.+..... ...+.+.+|.+ ...++++.++|+.+..+ +..++..++.+++.+.|+++ ....
T Consensus 231 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~--~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~- 306 (371)
T PRK13520 231 ILFRDESYLDALAVDTPYLTSKKQATLTGTRS--GAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER-GFEP- 306 (371)
T ss_pred EEEcCHHHHHhhcccCccccCCCCcceEeecc--ChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC-CCEE-
Confidence 8764 456665532000 00011122332 23456666777765443 35677788888888888765 2221
Q ss_pred eeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC--CEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 355 INFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG--NTVYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 355 ~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~--~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
...+...++.+.+. + +.++.+.|.++||.+..+. +++|++++..+|++|++.++++|+++++
T Consensus 307 -~~~~~~~~v~~~~~-~--------~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 307 -VIEPVLNIVAFDDP-N--------PDEVREKLRERGWRVSVTRCPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred -ecCCCceEEEEecC-C--------HHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 12233445555544 2 3678999999999988763 6799998889999999999999998765
No 177
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.92 E-value=3.1e-22 Score=192.12 Aligned_cols=319 Identities=15% Similarity=0.174 Sum_probs=206.3
Q ss_pred CHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCC--eEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEE
Q psy14484 52 NSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLG--HCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKF 129 (430)
Q Consensus 52 ~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~--~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~v 129 (430)
+|.+++++++.. .+ ......+..+++++.+++.++...+ .+++++||+++++.++..+.. +++++
T Consensus 11 ~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~--------~~~~v 77 (355)
T TIGR03301 11 SATVRDAMLVDW---CH--WDSEFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVP--------RDGKL 77 (355)
T ss_pred CHHHHHHhhhhc---cC--CCHHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccC--------CCCeE
Confidence 566666666521 11 1111136678899999999976554 678899999999999988764 45667
Q ss_pred EEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEcc
Q psy14484 130 ICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEP 209 (430)
Q Consensus 130 l~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep 209 (430)
++.++++++....... .........++.+..... |++++++.++++ .++..+++..
T Consensus 78 i~~~~~~~~~~~~~~a-----------~~~g~~~~~i~~~~~~~~------------d~~~l~~~l~~~-~~~~~v~~~~ 133 (355)
T TIGR03301 78 LVLINGAYGERLAKIC-----------EYLGIPHTDLNFSEYEPP------------DLNRIEEALAAD-PDITHVATVH 133 (355)
T ss_pred EEECCCchhhHHHHHH-----------HHcCCceEEEecCCCCCC------------CHHHHHHHHHhC-CCceEEEEEe
Confidence 7777766664211111 001122344444322222 789999999764 3455555555
Q ss_pred ccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCce--eeeecccCCCccccEEEEEcH
Q psy14484 210 LVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDF--LCLSKGITGGYLPLSLVMTTD 287 (430)
Q Consensus 210 ~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~--~~~sK~l~gG~~~ig~~~~~~ 287 (430)
+++++|...+ +++|.++|++||+++|+|++++ ++.. .+.+..+ ..|+ .+++|+++|+ ..+|++++++
T Consensus 134 -~~~~~G~~~~----~~~i~~l~~~~~~~livD~~~s-~g~~--~~~~~~~--~~d~~~~s~~K~l~~~-~G~g~~~~~~ 202 (355)
T TIGR03301 134 -HETTTGILNP----LEAIAKVARSHGAVLIVDAMSS-FGAI--PIDIEEL--DVDALIASANKCLEGV-PGFGFVIARR 202 (355)
T ss_pred -cCCcccchhH----HHHHHHHHHHcCCEEEEEeccc-cCCc--ccchhhc--CccEEEecCCcccccC-CceeEEEECH
Confidence 6677888777 8999999999999999999876 5432 2223333 3455 4678998765 4589999999
Q ss_pred HHHHhhhccCCccccc-------------ccCCCCCCHHHHHHHHHHHHHHhhcC----HHHHHHHHHHHHHHHHHchhc
Q psy14484 288 KIYNSIYYKNNINIFL-------------HSHSYSGNPLACCAALATLEIFNKDN----ILQRISQDMKKITKALTSLIT 350 (430)
Q Consensus 288 ~~~~~~~~~~~~~~~~-------------~~~t~~~~~~~~~aa~~~l~~~~~~~----~~~~~~~~~~~l~~~l~~l~~ 350 (430)
++++.+.. ...+.. ....++.+...+.++.++++.+.++. ..++++++.+++.+.|+++ .
T Consensus 203 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~-g 279 (355)
T TIGR03301 203 DLLEASAG--NARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL-G 279 (355)
T ss_pred HHHHHhhC--CCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-C
Confidence 98877652 111100 01234556677777777887664433 4456777888888888765 2
Q ss_pred CCCeee-EeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC----CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 351 HPKIIN-FRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG----NTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 351 ~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~----~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
...+.. ....+.++++.++ .... .. ..++.+.|.++||.+.++. +++||+++..+++++++++++.|++++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~-~~~~-~~--~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 280 FQPLLPERWQSPIIVSFLYP-DDPD-FD--FDDFYQELKERGFVIYPGKLTLADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred CeeecCCCCCCCcEEEEECC-CCCc-ch--HHHHHHHHHHCCEEEECCccccccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 221111 1233455566555 3211 11 3578999999999998863 589999988899999999999998753
No 178
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.92 E-value=8.2e-22 Score=191.99 Aligned_cols=338 Identities=14% Similarity=0.151 Sum_probs=208.8
Q ss_pred CCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhh-cCCCCCeEEEcCCchHHHHHHH
Q psy14484 33 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSL-TQYKLGHCFYGSDGASAVEVAL 111 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~v~~~~sgteA~~~al 111 (430)
|..++||..|. ..++ .++.+.+++.+.......+....+..+.++.+++.+... .+.++++|++|+|+++|+..++
T Consensus 29 ~~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~ 105 (397)
T PRK07568 29 GIKVYHLNIGQ--PDIK-TPEVFFEAIKNYDEEVLAYSHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAM 105 (397)
T ss_pred CCCEEEecCCC--CCCC-CCHHHHHHHHHHhcCCcCcCCCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHH
Confidence 44578877763 3333 367788888765433221221222334445555554421 1356789999999999999998
Q ss_pred HHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHH
Q psy14484 112 KMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDL 191 (430)
Q Consensus 112 ~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 191 (430)
..... +++.|++.+++|..+...... .+ .....++.+..... ...+++++
T Consensus 106 ~~l~~--------~gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~~g~---------~~~~~~~l 155 (397)
T PRK07568 106 MAICD--------PGDEILVPEPFYANYNGFATS-AG------------VKIVPVTTKIEEGF---------HLPSKEEI 155 (397)
T ss_pred HHhcC--------CCCEEEEecCCCccHHHHHHH-cC------------CEEEEeecCcccCC---------CCCCHHHH
Confidence 87653 567899999988765332111 11 12223332111000 00146788
Q ss_pred HHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccc-c-cccCCCCCcee--
Q psy14484 192 EILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-A-CEHAEIWPDFL-- 267 (430)
Q Consensus 192 e~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~-~-~~~~~~~~d~~-- 267 (430)
+++++ .+++++++.. ++|++| ...+.+.+++|.++|+++|+++|+||+|.+|.+.+... . ....+..+.++
T Consensus 156 ~~~~~---~~~~~v~i~~-p~NPtG-~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~ 230 (397)
T PRK07568 156 EKLIT---PKTKAILISN-PGNPTG-VVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIII 230 (397)
T ss_pred HHhcC---ccceEEEEEC-CCCCCC-ccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEE
Confidence 88775 4566776666 678888 56677779999999999999999999999886554321 1 12222223333
Q ss_pred -eeecccCC-CccccEEEEEc-HHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--hcCHHHHHHHHHHHHH
Q psy14484 268 -CLSKGITG-GYLPLSLVMTT-DKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQDMKKIT 342 (430)
Q Consensus 268 -~~sK~l~g-G~~~ig~~~~~-~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~~~~l~ 342 (430)
+|||.++. | +|+|+++++ +++++.+.. . ...+++.+.+.+.++..+|+..+ .+.+.+.+++..+.+.
T Consensus 231 ~S~SK~~~~~G-~R~G~~~~~~~~~~~~~~~------~-~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 302 (397)
T PRK07568 231 DSVSKRYSACG-ARIGCLISKNKELIAAAMK------L-CQARLSPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILY 302 (397)
T ss_pred ecchhhccCCC-cceEEEecCCHHHHHHHHH------H-hhccCCCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 79999985 7 899999985 677776653 1 11245667777777766664211 1223444555666666
Q ss_pred HHHHchhcCCCeeeEeecceE-EEEEEeecCCccchhHHHHHHHHHHH------CCcEEeec----------CCEEEEeC
Q psy14484 343 KALTSLITHPKIINFRQKGMI-WAFDVIIEDPEQIETFSKKFFVAALK------NELLLRPI----------GNTVYLMP 405 (430)
Q Consensus 343 ~~l~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~a~~~~~~l~~------~Gv~~~~~----------~~~lR~~~ 405 (430)
+.|+++ +.+....+.|.+ +++.+. .. . +.++++.|.+ +||.+.|+ .+++|+++
T Consensus 303 ~~L~~~---~~~~~~~p~g~~~~~~~l~-~~---~---~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~ 372 (397)
T PRK07568 303 EELNKI---PGVVCEKPKGAFYIIAKLP-VD---D---AEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAY 372 (397)
T ss_pred HHHhcC---CCceecCCCcceEEEEecC-CC---C---HHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEE
Confidence 666543 333333445554 455655 31 1 2467777765 58998873 14799976
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 406 PYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 406 ~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+ .+++++++++++|++++.+.
T Consensus 373 ~--~~~~~~~~~~~~l~~~l~~~ 393 (397)
T PRK07568 373 V--LNEEDLKRAMEILKEALEKY 393 (397)
T ss_pred e--CCHHHHHHHHHHHHHHHHHh
Confidence 5 56899999999999988764
No 179
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.92 E-value=9.1e-22 Score=192.42 Aligned_cols=343 Identities=12% Similarity=0.040 Sum_probs=206.8
Q ss_pred CCEEEecccccccccCCC-CCHHHHHHHHHHHhhccc--cccCCCCCHHHHHHHHHHHhhcC--CCCCeEEEcCCchHHH
Q psy14484 33 GKRYLDAISSWWVNLFGH-SNSYINKALKNQLNKLEH--VMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAV 107 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgteA~ 107 (430)
|+.++++..|.....-.. .+|++.+++.+++..... +....+..++++.+++.+.+..+ .++++|++|+|+++|+
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al 130 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAI 130 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHH
Confidence 778888776632211112 357899999988765321 12222334555666666655433 3567999999999999
Q ss_pred HHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC-C-CCCCCCCCChhHHHH
Q psy14484 108 EVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP-D-SRNINKGNSANEIAR 185 (430)
Q Consensus 108 ~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~ 185 (430)
..+++.+.. +++.|++.+|+|+.+......... +...++.+ . .+..
T Consensus 131 ~l~~~~l~~--------~Gd~Vlv~~P~y~~y~~~~~~~g~-------------~~~~~~~~~~~~~~~----------- 178 (430)
T PLN00145 131 EIIMSVLAQ--------PGANILLPRPGYPLYEARAVFSGL-------------EVRHFDLLPERGWEV----------- 178 (430)
T ss_pred HHHHHHhcC--------CCCEEEEcCCCCccHHHHHHHcCC-------------EEEEeeCCcccCCcC-----------
Confidence 999998754 667899999999886443332221 22233321 1 1122
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccc-ccccCCCCC
Q psy14484 186 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-ACEHAEIWP 264 (430)
Q Consensus 186 ~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~-~~~~~~~~~ 264 (430)
|++++++.++ .+++++++.. ++|++| ...+.+.+++|.++|+++|+++|+||+|..+.+.+..+ .....+-..
T Consensus 179 -d~~~l~~~~~---~~~~~i~i~~-P~NPtG-~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~ 252 (430)
T PLN00145 179 -DLEGVEALAD---ENTVAMVIIN-PNNPCG-SVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVA 252 (430)
T ss_pred -CHHHHHHHhC---cCceEEEEeC-CCCCCC-CCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccC
Confidence 8889988875 3455555555 567888 56778889999999999999999999999775443221 111111112
Q ss_pred c---eeeeecccC-CCccccEEEEE--cHHHHH------hhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh---cC
Q psy14484 265 D---FLCLSKGIT-GGYLPLSLVMT--TDKIYN------SIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK---DN 329 (430)
Q Consensus 265 d---~~~~sK~l~-gG~~~ig~~~~--~~~~~~------~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~---~~ 329 (430)
. +-+|||.++ .| +|+|++++ ++.+++ .+.. . .......+.+.+.++..+|+.-.+ ++
T Consensus 253 ~vi~~~S~SK~~~~pG-~RlG~iv~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~ 324 (430)
T PLN00145 253 PVLTLGSISKRWVVPG-WRLGWIATCDPNGILKETKVVDSIRN------Y-LNISTDPATFVQGAIPQIIANTKEEFFTK 324 (430)
T ss_pred cEEEEeccccccCCCC-eeEEEEEEecchhhhhhhHHHHHHHH------H-hcccCCCCHHHHHHHHHHHhcCHHHHHHH
Confidence 2 336999854 46 89999987 334332 2222 1 111223456777777776652111 12
Q ss_pred HHHHHHHHHHHHHHHHHchhcCCCeee-EeecceEEE-EEEeecCCccchhHHHHHHHHH-HHCCcEEeec-----CCEE
Q psy14484 330 ILQRISQDMKKITKALTSLITHPKIIN-FRQKGMIWA-FDVIIEDPEQIETFSKKFFVAA-LKNELLLRPI-----GNTV 401 (430)
Q Consensus 330 ~~~~~~~~~~~l~~~l~~l~~~~~~~~-~~~~g~~~~-~~~~~~~~~~~~~~a~~~~~~l-~~~Gv~~~~~-----~~~l 401 (430)
..+.+++..+.+.+.|+++ +++.. ..+.|.++. +.+. ...........+++..| .++||.+.|+ .+++
T Consensus 325 ~~~~~~~~~~~~~~~L~~~---~g~~~~~~P~ga~y~~v~l~-~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~l 400 (430)
T PLN00145 325 TLGLLKETADICYEKIKEI---KCITCPHKPEGSMFVMVKLD-LSCLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWL 400 (430)
T ss_pred HHHHHHHHHHHHHHHHhcC---CCCCCCcCCCeeeEEEeccC-hhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeE
Confidence 2344455555555555443 44332 235555544 4443 21000000024566555 4669999986 3789
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 402 YLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 402 R~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
||++. .+++++++++++|.+++.+
T Consensus 401 Ris~~--~~~~~l~~al~rl~~~~~~ 424 (430)
T PLN00145 401 RITFA--IDPPSLEDGLERLKSFCLR 424 (430)
T ss_pred EEEeC--CCHHHHHHHHHHHHHHHHH
Confidence 99766 5789999999999998864
No 180
>PLN02187 rooty/superroot1
Probab=99.92 E-value=2.6e-22 Score=197.60 Aligned_cols=324 Identities=13% Similarity=0.114 Sum_probs=196.9
Q ss_pred CHHHHHHHHHHHhhccc--cccCCCCCHHHHHHHHHHHhhc--CCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCc
Q psy14484 52 NSYINKALKNQLNKLEH--VMLSNLTHKPVIKLSEKLSSLT--QYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKK 127 (430)
Q Consensus 52 ~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~--~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~ 127 (430)
++++.+++.+.+..... +....+..++++.+++.+.+.+ +.++++|++|+|+++|+..+++++.. +++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~--------pGd 156 (462)
T PLN02187 85 CIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLAR--------PNA 156 (462)
T ss_pred CHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhcC--------CCC
Confidence 35688888887764321 1111222345556666665443 35788999999999999999998865 678
Q ss_pred EEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC--CCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEE
Q psy14484 128 KFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP--DSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAI 205 (430)
Q Consensus 128 ~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~v 205 (430)
.|++.+|+|.++.......+ .+...++.. +.+.. |+++|+++++. ...+++
T Consensus 157 ~Vlv~~P~y~~y~~~~~~~g-------------~~~~~~~l~~~~~~~~------------d~~~l~~~~~~--~~~~v~ 209 (462)
T PLN02187 157 NILLPRPGFPHYDARAAYSG-------------LEVRKFDLLPEKEWEI------------DLEGIEAIADE--NTVAMV 209 (462)
T ss_pred EEEEeCCCCccHHHHHHHcC-------------CEEEEEeCccccCCcc------------CHHHHHHhcCC--CcEEEE
Confidence 89999999998744333222 122333322 11222 78899888752 334455
Q ss_pred EEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccc-ccccC-CCCCc--eeeeecccCC-Ccccc
Q psy14484 206 IIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-ACEHA-EIWPD--FLCLSKGITG-GYLPL 280 (430)
Q Consensus 206 i~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~-~~~~~-~~~~d--~~~~sK~l~g-G~~~i 280 (430)
+++| +|++| ...+.+.+++|.++|++||+++|+||+|..+.+.+..+ ....+ ...+- +-+|||.++. | +|+
T Consensus 210 i~nP--~NPTG-~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pG-lRi 285 (462)
T PLN02187 210 VINP--NNPCG-NVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPG-WKI 285 (462)
T ss_pred EeCC--CCCCC-CccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCcc-cee
Confidence 5555 57778 66788889999999999999999999999865444322 11111 11121 2378999654 6 899
Q ss_pred EEEEEc-H-HHH---HhhhccCCcccccccCCC--CCCHHHHHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHHHchhc
Q psy14484 281 SLVMTT-D-KIY---NSIYYKNNINIFLHSHSY--SGNPLACCAALATLEIFNK---DNILQRISQDMKKITKALTSLIT 350 (430)
Q Consensus 281 g~~~~~-~-~~~---~~~~~~~~~~~~~~~~t~--~~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~l~~ 350 (430)
|+++++ + .+. +.+.. ......+ +.+.+++.++.++|+.... +...+.+++..+++.+.|+++
T Consensus 286 G~~v~~~p~~~~~~~~~~~~------~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~-- 357 (462)
T PLN02187 286 GWIALNDPEGVFETTKVLQS------IKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDI-- 357 (462)
T ss_pred EEEEecCchhHHHHHHHHHH------HHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhC--
Confidence 999984 3 222 23322 1111112 3467777777777752111 223344555555666666543
Q ss_pred CCCee-eEeec-ceEEEEEEeecCCcc-chhHHHHHHH-HHHHCCcEEeec-----CCEEEEeCCCCCCHHHHHHHHHHH
Q psy14484 351 HPKII-NFRQK-GMIWAFDVIIEDPEQ-IETFSKKFFV-AALKNELLLRPI-----GNTVYLMPPYILNKNEIQHMTSAI 421 (430)
Q Consensus 351 ~~~~~-~~~~~-g~~~~~~~~~~~~~~-~~~~a~~~~~-~l~~~Gv~~~~~-----~~~lR~~~~~~~t~e~i~~~~~~l 421 (430)
+... ...+. |.|+++.+. ..... ..+ ..+++. .+.++||.+.|+ .+++|+++. ..++.+++++++|
T Consensus 358 -~~~~~~~~P~gg~fl~~~l~-~~~~~~~~~-~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~--~~~e~l~~al~rL 432 (462)
T PLN02187 358 -PCVVCPKKPESCTYLLTKLE-LSLMDNIKD-DIDFCVKLAREENLVFLPGDALGLKNWMRITIG--VEAHMLEDALERL 432 (462)
T ss_pred -CCCcCCCCCCEeEEEEeecC-hhhCCCCCC-HHHHHHHHHhhCCEEEECccccCCCCeEEEEeC--CCHHHHHHHHHHH
Confidence 3322 12333 466666553 21100 001 234544 457889999986 268999665 5789999999999
Q ss_pred HHHHHH
Q psy14484 422 FQTFNE 427 (430)
Q Consensus 422 ~~~l~~ 427 (430)
.+++.+
T Consensus 433 ~~~l~~ 438 (462)
T PLN02187 433 KGFCTR 438 (462)
T ss_pred HHHHHH
Confidence 998864
No 181
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.92 E-value=4.4e-22 Score=191.04 Aligned_cols=323 Identities=13% Similarity=0.122 Sum_probs=200.6
Q ss_pred CCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHH
Q psy14484 33 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALK 112 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~ 112 (430)
...++||..+ .++++ .+|.+.+++.+.+.... .|+.....+|++.+++.++.++++|++|+|+++++..+++
T Consensus 21 ~~~~i~l~~~--~n~~~-~~~~~~~a~~~~~~~~~-----~Y~~~~~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~~ 92 (360)
T PRK07392 21 PDAILDFSAS--INPLG-PPESVIAAIQSALSALR-----HYPDPDYRELRLALAQHHQLPPEWILPGNGAAELLTWAGR 92 (360)
T ss_pred cccEEEeCCc--CCCCC-CCHHHHHHHHHHHHHhh-----cCCCcCHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHH
Confidence 3467898866 56676 67899999888776422 2222223577778888877788999999999999998888
Q ss_pred HHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHH
Q psy14484 113 MSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLE 192 (430)
Q Consensus 113 ~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le 192 (430)
++. +++.|++.+|+|.++.......+. .+..++........ ....++++++
T Consensus 93 ~l~---------~g~~vlv~~P~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~~-------~~~~~~~~~~ 143 (360)
T PRK07392 93 ELA---------QLRAVYLITPAFGDYRRALRAFGA-------------TVKELPLPLDQPSP-------GLTLRLQTLP 143 (360)
T ss_pred HhC---------CCCeEEEECCCcHHHHHHHHHcCC-------------eEEEEecccccCCc-------ccccCHHHHH
Confidence 643 345899999999887554443222 22233322111000 0001345544
Q ss_pred HHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccc-cccCCCCCc---eee
Q psy14484 193 ILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA-CEHAEIWPD---FLC 268 (430)
Q Consensus 193 ~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~-~~~~~~~~d---~~~ 268 (430)
+.. .+++++++.. ++|++|...+ .++|.++++++++ +|+||+|..|...+.... .......+. +-+
T Consensus 144 ~~~----~~~~~~~l~n-P~NPTG~~~~----~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S 213 (360)
T PRK07392 144 PQL----TPNDGLLLNN-PHNPTGKLWS----REAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRS 213 (360)
T ss_pred Hhc----cCCCEEEEeC-CCCCCCCCcC----HHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEe
Confidence 432 2345555555 7888886665 5677788888885 666999998865442111 111121223 337
Q ss_pred eecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHH
Q psy14484 269 LSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKALT 346 (430)
Q Consensus 269 ~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-~~~~~~~~~~~~~~l~~~l~ 346 (430)
|||.++ .| +|+|++++++++++.+.. ....++.+.+++.++.++|+... .....+.+++..+++.+.|+
T Consensus 214 ~SK~~~l~G-lRiG~~v~~~~~~~~~~~--------~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~ 284 (360)
T PRK07392 214 LTKFYSLPG-LRLGYAIAHPDRLQRWQQ--------WRDPWPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLA 284 (360)
T ss_pred chhhhcCCc-hheeeeeCCHHHHHHHHh--------hCCCCCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998 67 899999999998887765 22346678888888877775211 11122344555555555555
Q ss_pred chhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHH-HHCCcEEeec-------CCEEEEeCCCCCCHHHHHHHH
Q psy14484 347 SLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAA-LKNELLLRPI-------GNTVYLMPPYILNKNEIQHMT 418 (430)
Q Consensus 347 ~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l-~~~Gv~~~~~-------~~~lR~~~~~~~t~e~i~~~~ 418 (430)
.+ +++...++.|.++++.+. . . +.++++.+ .+.||.+.|+ .+++|+++. +.++.+++.
T Consensus 285 ~~---~~~~~~~~~~~fl~~~~~-~----~---~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~---~~~~~~~l~ 350 (360)
T PRK07392 285 SL---PGLTPLPSAANFLLVQSQ-G----S---ALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVR---TEAENQRLL 350 (360)
T ss_pred hC---CCcEECCCCCCEEEEEcC-C----C---HHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeC---CHHHHHHHH
Confidence 43 333333455667666554 2 1 35688775 4679999886 158999765 455556666
Q ss_pred HHHHHHH
Q psy14484 419 SAIFQTF 425 (430)
Q Consensus 419 ~~l~~~l 425 (430)
+.|++.+
T Consensus 351 ~al~~~~ 357 (360)
T PRK07392 351 EALAAIL 357 (360)
T ss_pred HHHHHHh
Confidence 6665544
No 182
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.92 E-value=4.1e-22 Score=194.06 Aligned_cols=341 Identities=13% Similarity=0.070 Sum_probs=209.6
Q ss_pred CCEEEecccccccc--cCCCCCHHHHHHHHHHHhhccc--cccCCCCCHHHHHHHHHHHhhc-CCCCCeEEEcCCchHHH
Q psy14484 33 GKRYLDAISSWWVN--LFGHSNSYINKALKNQLNKLEH--VMLSNLTHKPVIKLSEKLSSLT-QYKLGHCFYGSDGASAV 107 (430)
Q Consensus 33 g~~~lD~~~~~~~~--~lG~~~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~-~~~~~~v~~~~sgteA~ 107 (430)
|+.+++|..|.... .++ .++.+.+++.+.+..... +....+..++.+.+++.+.+.- ...+++|++|+|+++|+
T Consensus 30 ~~~~i~l~~g~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al 108 (401)
T TIGR01264 30 EKPMIKLSIGDPTVFGNLP-TDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAI 108 (401)
T ss_pred CCCeeecCCCCCCCcCCCC-CCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHH
Confidence 46788888764321 233 467888998887665221 1111222234445555444311 14677999999999999
Q ss_pred HHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC--CCCCCCCCChhHHHH
Q psy14484 108 EVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD--SRNINKGNSANEIAR 185 (430)
Q Consensus 108 ~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 185 (430)
..++.+++. +++.|++.+|+|..+.......+ ..+..++.+. .+..
T Consensus 109 ~~~~~~l~~--------~gd~v~i~~P~y~~~~~~~~~~g-------------~~v~~~~~~~~~~~~~----------- 156 (401)
T TIGR01264 109 EMCIAALAN--------AGQNILVPRPGFPLYETLAESMG-------------IEVKLYNLLPDKSWEI----------- 156 (401)
T ss_pred HHHHHHhCC--------CCCEEEEeCCCChhHHHHHHHcC-------------CEEEEeecCCccCCCC-----------
Confidence 999987764 56789999999987643322221 1222333321 1121
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCc
Q psy14484 186 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 265 (430)
Q Consensus 186 ~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d 265 (430)
|++.+++.+. .+++++++.. ++|++| ...+.+.+++|.++|+++|+++|+||+|.+|.+.+..+. ......++
T Consensus 157 -d~~~l~~~~~---~~~~~v~~~~-p~NPtG-~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~-~~~~~~~~ 229 (401)
T TIGR01264 157 -DLKQLESLID---EKTAALIVNN-PSNPCG-SVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFE-PLASLSST 229 (401)
T ss_pred -CHHHHHHHhc---cCceEEEEcC-CCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccc-cHHHcCCC
Confidence 7888888875 3456666666 788888 456788899999999999999999999998755542111 11111221
Q ss_pred -----eeeeecccCC-CccccEEEEEcH------HHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCH---
Q psy14484 266 -----FLCLSKGITG-GYLPLSLVMTTD------KIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNI--- 330 (430)
Q Consensus 266 -----~~~~sK~l~g-G~~~ig~~~~~~------~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~--- 330 (430)
+-+|||.++. | +|+|++++++ ++.+.+.. . ....++.+.+++.++.+.|+.. .+++
T Consensus 230 ~~vi~~~SfSK~~~~~G-lRiG~iv~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~q~a~~~~l~~~-~~~~l~~ 300 (401)
T TIGR01264 230 VPILSCGGLAKRWLVPG-WRLGWIIIHDRRGILRDIRDGLVK------L-SQRILGPCTIVQGALPSILLRT-PQEYFDG 300 (401)
T ss_pred CcEEEEccCcccCCCcc-ceEEEEEecCcchhHHHHHHHHHH------H-hhccCCCCcHHHHHHHHHHHhC-cHHHHHH
Confidence 3379998554 5 8999999874 33333332 1 1123455677777777766521 1223
Q ss_pred -HHHHHHHHHHHHHHHHchhcCCCeee-EeecceEEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec-----CCEEE
Q psy14484 331 -LQRISQDMKKITKALTSLITHPKIIN-FRQKGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-----GNTVY 402 (430)
Q Consensus 331 -~~~~~~~~~~l~~~l~~l~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~-----~~~lR 402 (430)
.+.+++..+++.+.|+.+ +.+.. .+..|+++++.+. ...........++++.|+ ++||.+.|+ .+++|
T Consensus 301 ~~~~~~~~r~~l~~~L~~~---~~~~~~~p~~g~f~~~~~~-~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iR 376 (401)
T TIGR01264 301 TLSVLESNAMLCYGALAAV---PGLRPVMPSGAMYMMVGIE-MEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFR 376 (401)
T ss_pred HHHHHHHHHHHHHHHHHhC---CCCcccCCCeeeEEEEEec-ccccCCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEE
Confidence 334444555555555543 33322 2445777777764 310000000256778775 789999875 36899
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 403 LMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 403 ~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
++++ ..++++++++++|.+.+.++
T Consensus 377 is~~--~~~~~l~~~l~rl~~~~~~~ 400 (401)
T TIGR01264 377 VVLT--VPVVMMEEACSRIQEFCERH 400 (401)
T ss_pred EEEc--CCHHHHHHHHHHHHHHHhcc
Confidence 9765 46899999999999988653
No 183
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.91 E-value=8.5e-22 Score=191.90 Aligned_cols=345 Identities=14% Similarity=0.087 Sum_probs=211.0
Q ss_pred EECCCCEEEecccccccccCC-C-CCHHHHHHHHHHHhhc--cccccCCCCCHHHHHHHHHHHhhc--CCCCCeEEEcCC
Q psy14484 29 IDVSGKRYLDAISSWWVNLFG-H-SNSYINKALKNQLNKL--EHVMLSNLTHKPVIKLSEKLSSLT--QYKLGHCFYGSD 102 (430)
Q Consensus 29 ~d~~g~~~lD~~~~~~~~~lG-~-~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~v~~~~s 102 (430)
-..+++.++++..|... .+| + .+|.+.+++.+.+... ..+....+..++++.+++.+.+.. +.++++|++|+|
T Consensus 27 ~~~~~~~~i~l~~G~p~-~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G 105 (409)
T PLN00143 27 NEDDHRLAISFGFGDPS-CFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLG 105 (409)
T ss_pred ccCCCCceeeCCCCCCC-CCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecC
Confidence 34467889998876321 112 1 5778889998887653 212222344456677777776543 356789999999
Q ss_pred chHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC--CCCCCCCCCCh
Q psy14484 103 GASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP--DSRNINKGNSA 180 (430)
Q Consensus 103 gteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 180 (430)
+++++..+++++.. +++.|++.+|+|+++.......+. ....++.. +.+..
T Consensus 106 ~~~al~~~~~~l~~--------~gd~v~v~~P~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~------ 158 (409)
T PLN00143 106 CKHAAEIIIKVLAR--------PEANILLPRPGFPDVETYAIFHHL-------------EIRHFDLLPEKGWEV------ 158 (409)
T ss_pred hHHHHHHHHHHHcC--------CCCEEEEcCCCCcCHHHHHHHcCC-------------EEEEEeccCCCCCcC------
Confidence 99999999998765 678999999999887544333221 11222221 11111
Q ss_pred hHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccc-cccc
Q psy14484 181 NEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-ACEH 259 (430)
Q Consensus 181 ~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~-~~~~ 259 (430)
|+++|+++++. ....+++++ ++|++| ...+.+.+++|.++|++|++++|+||+|..+...+..+ ....
T Consensus 159 ------d~~~l~~~~~~--~~~~~~~~n--P~NPTG-~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~ 227 (409)
T PLN00143 159 ------DLDAVEAIADE--NTIAMVIIN--PGNPCG-SVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGL 227 (409)
T ss_pred ------CHHHHHHhccc--CCEEEEEEC--CCCCCC-CccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhh
Confidence 78899887752 334455555 467888 66778889999999999999999999999875544321 1111
Q ss_pred CCCCCc---eeeeecccCC-CccccEEEEEc-H-HHH------HhhhccCCcccccccCCCCCCHHHHHHHHHHHHHH-h
Q psy14484 260 AEIWPD---FLCLSKGITG-GYLPLSLVMTT-D-KIY------NSIYYKNNINIFLHSHSYSGNPLACCAALATLEIF-N 326 (430)
Q Consensus 260 ~~~~~d---~~~~sK~l~g-G~~~ig~~~~~-~-~~~------~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~-~ 326 (430)
..-... +-+|||.++. | +|+|+++++ + .+. +.+.. ......+ .+.+++.++.++|+.. .
T Consensus 228 ~~~~~~vi~~~SfSK~f~~pG-lRvG~~v~~~p~~~~~~~~~~~~~~~------~~~~~~~-~~~~~q~a~~~~l~~~~~ 299 (409)
T PLN00143 228 FASIVPVITLGSISKRWMIPG-WGLGWLVTCDPSGLLQICEIADSIKK------ALNPAPF-PPTFIQAAIPEILEKTTE 299 (409)
T ss_pred hcccCcEEEEccchhhcCCCc-cceEEEEeeCchhhhhhHHHHHHHHH------HHhccCC-CCchHHHHHHHHHhcChH
Confidence 111112 3379998554 6 899999983 3 332 22222 1111222 3566777776666421 0
Q ss_pred --hcCHHHHHHHHHHHHHHHHHchhcCCCee-eEee-cceEEEEEEeecCC-ccchhHHHHHHH-HHHHCCcEEeec---
Q psy14484 327 --KDNILQRISQDMKKITKALTSLITHPKII-NFRQ-KGMIWAFDVIIEDP-EQIETFSKKFFV-AALKNELLLRPI--- 397 (430)
Q Consensus 327 --~~~~~~~~~~~~~~l~~~l~~l~~~~~~~-~~~~-~g~~~~~~~~~~~~-~~~~~~a~~~~~-~l~~~Gv~~~~~--- 397 (430)
-++..+.+++..+++.+.|+++ +... ...+ -|.++++.+. ... ....+ ..+++. .+.++||.+.|+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~L~~~---~~~~~~~~p~gg~f~w~~l~-~~~~~~~~~-~~~~~~~ll~~~gV~v~pg~~f 374 (409)
T PLN00143 300 DFFSKTINILRAALAFCYDKLKEI---PCIMCPQKAEGAFFALVKLN-LLLLEDIED-DMEFCLKLAKEESLIILPGVTV 374 (409)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC---CCCCCCCCCCeeEEEEEecc-hhhcCCCCC-HHHHHHHHHHhCCEEEeCcccc
Confidence 1223344455555555555543 3221 1223 3556666664 310 00000 234554 457889999986
Q ss_pred --CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 398 --GNTVYLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 398 --~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
.+++|++++ .+++++++.+++|.+++.+
T Consensus 375 ~~~~~iRi~~~--~~~~~l~~al~rl~~~l~~ 404 (409)
T PLN00143 375 GLKNWLRITFA--VEQSSLEDGLGRLKSFCGR 404 (409)
T ss_pred CCCCeEEEEEc--CCHHHHHHHHHHHHHHHHH
Confidence 268999766 5689999999999998865
No 184
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.91 E-value=1.1e-22 Score=193.84 Aligned_cols=322 Identities=16% Similarity=0.126 Sum_probs=202.8
Q ss_pred ecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHh
Q psy14484 38 DAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHY 117 (430)
Q Consensus 38 D~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~ 117 (430)
||++. +++| .+|++++++.+.+... ...++.+...++++.+++.++ .+++++++||++|+..+++.+..
T Consensus 1 ~~~~~---~~~~-~~~~v~~a~~~~~~~~----~~~~~~~~~~~l~~~~a~~~g--~~~~~~~~~gt~a~~~~~~~l~~- 69 (338)
T cd06502 1 DFRSD---TVTG-PTPEMLEAMAAANVGD----DVYGEDPTTAKLEARAAELFG--KEAALFVPSGTAANQLALAAHTQ- 69 (338)
T ss_pred Ccccc---cCCC-CCHHHHHHHHhcccCC----cccCCCHHHHHHHHHHHHHhC--CCeEEEecCchHHHHHHHHHhcC-
Confidence 56664 6777 7899999998865321 123456778899999999996 57889999999999999987753
Q ss_pred hhhcCCCCCcEEEEEcCCCCCcchhh--hccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHH
Q psy14484 118 WYNKGFLNKKKFICLQNSYHGETLGA--LAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILL 195 (430)
Q Consensus 118 ~~~~g~~~~~~vl~~~~~yhg~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l 195 (430)
+++.|++.+++|....... .... ..+...++.+. .. .|+++|++++
T Consensus 70 -------~gd~v~~~~~~~~~~~~~~~~~~~~------------g~~~~~v~~~~-~~------------~d~~~l~~~i 117 (338)
T cd06502 70 -------PGGSVICHETAHIYTDEAGAPEFLS------------GVKLLPVPGEN-GK------------LTPEDLEAAI 117 (338)
T ss_pred -------CCCeEEEecCcceeeecCCcHHHHc------------CceEEeecCCC-Cc------------CCHHHHHHHh
Confidence 5667776666553321110 0101 11223333221 11 1889999998
Q ss_pred HhCC----CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCC--CCcccccccccCCCCCcee--
Q psy14484 196 KKNH----NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGC--GRTGKFFACEHAEIWPDFL-- 267 (430)
Q Consensus 196 ~~~~----~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~--g~~g~~~~~~~~~~~~d~~-- 267 (430)
++.. .++++++++. ++++|| .. +.+.+++|.++|+++|+++|+||+|..+ ...|. ........+|++
T Consensus 118 ~~~~~~~~~~~~~v~l~~-p~n~g~-~~-~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~--~~~~~~~~~d~~~~ 192 (338)
T cd06502 118 RPRDDIHFPPPSLVSLEN-TTEGGT-VY-PLDELKAISALAKENGLPLHLDGARLANAAAALGV--ALKTYKSGVDSVSF 192 (338)
T ss_pred hccCCCcCCcceEEEEEe-ecCCcc-cc-CHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCC--CHHHHHhcCCEEEE
Confidence 7421 2567777776 666644 33 7788999999999999999999987411 11121 111112235555
Q ss_pred eeecccCCCccccEE-EEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q psy14484 268 CLSKGITGGYLPLSL-VMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALT 346 (430)
Q Consensus 268 ~~sK~l~gG~~~ig~-~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~ 346 (430)
+++|.++. +.|+ +++++++++.+... ...+++++..+++.++++.++|+.-......+++.++.+++.+.|+
T Consensus 193 s~sK~~~~---~~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~ 265 (338)
T cd06502 193 CLSKGGGA---PVGAVVVGNRDFIARARRR----RKQAGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALE 265 (338)
T ss_pred eccccCCC---ccceEEECCHHHHHHHHHH----HHHhCCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 67788864 3344 55688888776540 0012244445566666666666521112345667777888888887
Q ss_pred chhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHH---HCCcEEeecC-CEEEEeCCCCCCHHHHHHHHHHHH
Q psy14484 347 SLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAAL---KNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIF 422 (430)
Q Consensus 347 ~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~---~~Gv~~~~~~-~~lR~~~~~~~t~e~i~~~~~~l~ 422 (430)
++. . ......+.++.+... .+ ......+.+.+. ++|+.+.+.+ +++||++++.++++++++++++|+
T Consensus 266 ~~~---~-~~~~~~~~~~~v~~~-~~----~~~~~~l~~~l~~~~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~ 336 (338)
T cd06502 266 ELG---G-LESEVQTNIVLLDPV-EA----NAVFVELSKEAIERRGEGVLFYAWGEGGVRFVTHWDTTEEDVDELLSALK 336 (338)
T ss_pred hcC---C-CcccccCCeEEEecC-Cc----cHHHHHHHHHHHHhhhCCEEEEecCCCeEEEEeecCCCHHHHHHHHHHHh
Confidence 652 1 112344556555543 22 111234455443 7899998764 899999999999999999999986
Q ss_pred H
Q psy14484 423 Q 423 (430)
Q Consensus 423 ~ 423 (430)
+
T Consensus 337 ~ 337 (338)
T cd06502 337 A 337 (338)
T ss_pred c
Confidence 5
No 185
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=1.9e-22 Score=191.24 Aligned_cols=315 Identities=12% Similarity=0.085 Sum_probs=201.5
Q ss_pred EEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC---CCCCeEEEcCCch
Q psy14484 28 LIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ---YKLGHCFYGSDGA 104 (430)
Q Consensus 28 ~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~v~~~~sgt 104 (430)
-+...|+..+|+..| .+.++ .+|.+++++.+.+...... .|+.....++++.+++.++ .++++|++|+|++
T Consensus 13 ~~~~~~~~~i~l~~~--~~~~~-~p~~~~~~~~~~~~~~~~~---~Y~~~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~ 86 (335)
T PRK14808 13 PYETEKRDRTYLALN--ENPFP-FPEDLVDEVFRRLNSDTLR---IYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGAD 86 (335)
T ss_pred CCCCCCCceeEecCC--CCCCC-CCHHHHHHHHHHhhhhhhh---cCCCCChHHHHHHHHHHhCCCCCCcceEEEcCCHH
Confidence 445577899998877 66776 5788999998876432111 1222234566666666654 5788999999999
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHH
Q psy14484 105 SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA 184 (430)
Q Consensus 105 eA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (430)
+++..+++.. +.|++.+|+|.++...+...+. ....++....+
T Consensus 87 ~~i~~~~~~~------------d~v~v~~P~y~~~~~~~~~~g~-------------~~~~v~~~~~~------------ 129 (335)
T PRK14808 87 EIIYVMMLMF------------DRSVFFPPTYSCYRIFAKAVGA-------------KFLEVPLTKDL------------ 129 (335)
T ss_pred HHHHHHHHHh------------CcEEECCCCHHHHHHHHHHcCC-------------eEEEecCCCcC------------
Confidence 9999888754 3488899999987555444332 22233332111
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccc-cccCCCC
Q psy14484 185 RCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA-CEHAEIW 263 (430)
Q Consensus 185 ~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~-~~~~~~~ 263 (430)
.++.. .+. .++++++.. ++|++|...+ .+.++ +++ ++++++|+||+|..|.. ..... .......
T Consensus 130 --~~~~~--~~~----~~~~i~i~n-P~NPTG~~~s-~~~l~---~l~-~~~~~ii~DE~Y~~f~~-~~~~~~~~~~~~v 194 (335)
T PRK14808 130 --RIPEV--NVG----EGDVVFIPN-PNNPTGHVFE-REEIE---RIL-KTGAFVALDEAYYEFHG-ESYVDLLKKYENL 194 (335)
T ss_pred --CCChh--Hcc----CCCEEEEeC-CCCCCCCCcC-HHHHH---HHH-hcCCEEEEECchhhhcC-CchHHHHHhCCCE
Confidence 11111 121 235555655 7888885554 44444 444 47999999999998731 11111 1111111
Q ss_pred CceeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh-cCHHHHHHHHHHHH
Q psy14484 264 PDFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK-DNILQRISQDMKKI 341 (430)
Q Consensus 264 ~d~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~-~~~~~~~~~~~~~l 341 (430)
.-+.+|||.++ .| +|+|++++++++++.+.. ...+++.+.+++.++.++++..+. .+..+.+++..+++
T Consensus 195 i~~~S~SK~~~l~G-lRvG~~v~~~~~~~~l~~--------~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l 265 (335)
T PRK14808 195 AVIRTFSKAFSLAA-QRIGYVVSSEKFIDAYNR--------VRLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERM 265 (335)
T ss_pred EEEEechhhccCcc-cceEEEEeCHHHHHHHHH--------hcCCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 22347999998 57 899999999999888865 123456677777777777753211 22233444445555
Q ss_pred HHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecCCEEEEeCCCCCCHHHHHHHHHHH
Q psy14484 342 TKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAI 421 (430)
Q Consensus 342 ~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~~~lR~~~~~~~t~e~i~~~~~~l 421 (430)
.+.|+++ + +...++.|.|+++.+. .. . ..++.+.|.++||.+....+++|+++. ++++.+++++.|
T Consensus 266 ~~~L~~~---g-~~~~~~~g~f~~~~l~-~~----~--~~~~~~~l~~~Gi~V~~~~~~~Risi~---~~~~~~~~~~~l 331 (335)
T PRK14808 266 KSALREM---G-YRITDSRGNFVFIFME-KE----E--KERLLEHLRAKNIAVRSFREGVRITIG---KREENDMILKEL 331 (335)
T ss_pred HHHHHHC---C-CEECCCCCeEEEEeCC-Cc----c--HHHHHHHHHHCCeEEEECCCCeEEecC---CHHHHHHHHHHH
Confidence 5655543 2 2334567888887765 31 1 256889999999999988788999866 789999999998
Q ss_pred HH
Q psy14484 422 FQ 423 (430)
Q Consensus 422 ~~ 423 (430)
++
T Consensus 332 ~~ 333 (335)
T PRK14808 332 EV 333 (335)
T ss_pred Hh
Confidence 75
No 186
>PLN02721 threonine aldolase
Probab=99.91 E-value=6.9e-22 Score=189.54 Aligned_cols=338 Identities=14% Similarity=0.109 Sum_probs=204.9
Q ss_pred EEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHH
Q psy14484 35 RYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMS 114 (430)
Q Consensus 35 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~ 114 (430)
+++||.++... ..+|.+++++.+. ..... ..+..+...++++.++++++ .+.++++++|++++..++.+.
T Consensus 6 ~~~~~~~~~~~----~~~~~~~~a~~~~--~~~~~--~~~~~~~~~~l~~~la~~~~--~~~~~~~~~Gs~a~~~~l~~~ 75 (353)
T PLN02721 6 RVVDLRSDTVT----KPTDAMRAAMANA--EVDDD--VLGYDPTALRLEEEMAKIFG--KEAALFVPSGTMGNLISVLVH 75 (353)
T ss_pred hhhhhhccccc----CCCHHHHHHHHhc--cCCCc--ccCCCHHHHHHHHHHHHHhC--CceeEEecCccHHHHHHHHHH
Confidence 46788887543 3678999998764 11111 12345667899999999995 456888899999988887775
Q ss_pred HHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHH
Q psy14484 115 FHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEIL 194 (430)
Q Consensus 115 ~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~ 194 (430)
... +++.|++.+++|......... ......+...++.+.+... |++++++.
T Consensus 76 ~~~-------~gd~Vl~~~~~~~~~~~~~~~----------~~~~g~~~~~v~~~~~~~~------------d~~~l~~~ 126 (353)
T PLN02721 76 CDV-------RGSEVILGDNSHIHLYENGGI----------STLGGVHPRTVKNNEDGTM------------DLDAIEAA 126 (353)
T ss_pred ccC-------CCCeEEEcCccceehhcccch----------hhhcCceeEecCCCcCCCc------------CHHHHHHH
Confidence 431 457788888876322110000 0011122233333222111 88999999
Q ss_pred HHhCC----CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc-ccccccCCCCCc--ee
Q psy14484 195 LKKNH----NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-FFACEHAEIWPD--FL 267 (430)
Q Consensus 195 l~~~~----~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~-~~~~~~~~~~~d--~~ 267 (430)
+++.. ++++++++++ ++++.|...++.+.+++|.++|+++|+++|+||+|. ++.... ...........| ++
T Consensus 127 i~~~~~~~~~~~~~v~l~~-~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~-~~~~~~~~~~~~~~~~~~d~~~~ 204 (353)
T PLN02721 127 IRPKGDDHFPTTRLICLEN-THANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARI-FNASVALGVPVHRLVKAADSVSV 204 (353)
T ss_pred HHhccCCCCCcceEEEEec-cccccCCccccHHHHHHHHHHHHHcCCEEEEEchhh-hcchhhhCCCHHHHhhhCCEEEE
Confidence 97431 3678888888 666654477788889999999999999999999986 321100 000110111234 45
Q ss_pred eeecccCCCccccEE-EEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q psy14484 268 CLSKGITGGYLPLSL-VMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALT 346 (430)
Q Consensus 268 ~~sK~l~gG~~~ig~-~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~ 346 (430)
++||++++ ++|+ +++++++++.+.. .... ...+.......++++..+++... +...+..++.+++.+.|+
T Consensus 205 s~sK~l~~---~~G~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~L~ 275 (353)
T PLN02721 205 CLSKGLGA---PVGSVIVGSKSFIRKAKR---LRKT-LGGGMRQVGVLAAAALVALQENV--PKLEDDHKKAKLLAEGLN 275 (353)
T ss_pred ecccccCC---ceeeEEecCHHHHHhHHH---HHHh-cCCCeehhHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHH
Confidence 78999874 5665 5678888776543 0000 01111011122223333443211 122333456667777776
Q ss_pred chhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 347 SLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 347 ~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
++..... ......+.++++.+. .... . ....++++|.++||.+.+.+ +++|+++++.++++++++++++|++++
T Consensus 276 ~~~~~~~-~~~~~~~~~~~~~~~-~~~~-~--~~~~~~~~L~~~gi~v~~~~~~~lR~~~~~~~~~~~i~~~~~~l~~~~ 350 (353)
T PLN02721 276 QIKGLRV-NVAAVETNIVYFDIT-DGSR-I--TAEKLCKSLEEHGVLLMPGNSSRIRVVTHHQISDSDVQYTLSCFQQAA 350 (353)
T ss_pred hCCCcEE-ecCCccceEEEEEcc-CCcc-c--cHHHHHHHHHhCCcEEecCCCceEEEEecCcCCHHHHHHHHHHHHHHh
Confidence 6522211 112334567777765 3210 1 13679999999999999876 789999999999999999999999877
Q ss_pred HH
Q psy14484 426 NE 427 (430)
Q Consensus 426 ~~ 427 (430)
..
T Consensus 351 ~~ 352 (353)
T PLN02721 351 LT 352 (353)
T ss_pred hc
Confidence 53
No 187
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.91 E-value=7.9e-22 Score=191.59 Aligned_cols=336 Identities=12% Similarity=0.039 Sum_probs=210.4
Q ss_pred ECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC----CCCC-eEEEcCCch
Q psy14484 30 DVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ----YKLG-HCFYGSDGA 104 (430)
Q Consensus 30 d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~----~~~~-~v~~~~sgt 104 (430)
+..|+.++||..| ...++ .+|.+.+++.+.+.....+..+.+..++++.+++.+.+.++ .+++ +|++|+|++
T Consensus 24 ~~~~~~~i~l~~~--~p~~~-~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~ 100 (393)
T TIGR03538 24 PPASKPPIALSIG--EPKHP-TPAFVLEALRENLHGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTR 100 (393)
T ss_pred hhcCCCeEEecCC--CCCCC-CCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcH
Confidence 3467889998877 44555 47889999988765433333333345666777777766543 3564 799999999
Q ss_pred HHHHHHHHHHHHhhhhcCCCCC-cEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHH
Q psy14484 105 SAVEVALKMSFHYWYNKGFLNK-KKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEI 183 (430)
Q Consensus 105 eA~~~al~~~~~~~~~~g~~~~-~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (430)
+|+..++++++.. ++ ..|++.+|+|.++.......+ .....++........
T Consensus 101 ~al~~~~~~l~~~-------gd~~~vlv~~P~y~~~~~~~~~~g-------------~~~~~v~~~~~~~~~-------- 152 (393)
T TIGR03538 101 EALFAFAQAVINP-------GQAPLVVMPNPFYQIYEGAALLAG-------------AEPYFLNCTAENGFL-------- 152 (393)
T ss_pred HHHHHHHHHHcCC-------CCcceEEecCCCCcchHHHHHhcC-------------CeEEEeeccccCCCC--------
Confidence 9999999987651 33 258899999987744322211 122333332111000
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc--ccc----c
Q psy14484 184 ARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK--FFA----C 257 (430)
Q Consensus 184 ~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~--~~~----~ 257 (430)
-|++++++.+. .+++++++.. ++|++| ...+.+.+++|.++|++|++++|+||+|..+...+. ... .
T Consensus 153 --~d~~~l~~~~~---~~~k~i~l~~-p~NPtG-~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~ 225 (393)
T TIGR03538 153 --PDFDAVPESVW---RRCQLLFVCS-PGNPTG-AVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAA 225 (393)
T ss_pred --CCHHHHHHHHh---hcceEEEEeC-CCCCcC-cccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhc
Confidence 17788888775 3566766666 788888 567788899999999999999999999987754321 111 1
Q ss_pred ccCCC--CCc---eeeeecccCC-CccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-hcCH
Q psy14484 258 EHAEI--WPD---FLCLSKGITG-GYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNI 330 (430)
Q Consensus 258 ~~~~~--~~d---~~~~sK~l~g-G~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-~~~~ 330 (430)
...+. .+. +-+|||.++. | +|+|++++++++++.+.. .....+++.+.+.+.++.+++..-+ -...
T Consensus 226 ~~~~~~~~~~vi~i~S~SK~~~~~G-lRvG~~i~~~~l~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~ 298 (393)
T TIGR03538 226 AQLGRDDFRRCLVFHSLSKRSNLPG-LRSGFVAGDAEILKAFLR------YRTYHGCAMPIPTQLASIAAWNDEQHVREN 298 (393)
T ss_pred ccccccccccEEEEecchhhcCCcc-cceEEEecCHHHHHHHHH------HHHhhccCcCHHHHHHHHHHhcChHHHHHH
Confidence 11111 122 3379997654 6 899999999998887764 1122344556777777666653100 0122
Q ss_pred HHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec------------
Q psy14484 331 LQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI------------ 397 (430)
Q Consensus 331 ~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~------------ 397 (430)
.+.+++..+.+.+.|++. .+. ..+..|.++++.+. .+ ..++++.|+ ++||.+.|+
T Consensus 299 ~~~~~~~~~~~~~~L~~~--~~~--~~p~gg~f~~~~~~-~~-------~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~ 366 (393)
T TIGR03538 299 RALYREKFAAVLEILGQV--LDL--ELPDAGFYLWPKVP-GD-------DEAFARALYEEENVTVLPGRFLAREAEGVNP 366 (393)
T ss_pred HHHHHHHHHHHHHHHHhh--Ccc--cCCCeeEEEEEECC-CC-------HHHHHHHHHHHCCEEEeCCccccccccCCCC
Confidence 333444455555555432 111 12333555555543 21 256888875 579998654
Q ss_pred -CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q psy14484 398 -GNTVYLMPPYILNKNEIQHMTSAIFQT 424 (430)
Q Consensus 398 -~~~lR~~~~~~~t~e~i~~~~~~l~~~ 424 (430)
.+++||++. .+++++++++++|++.
T Consensus 367 ~~~~~Ris~~--~~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 367 GEGRVRIALV--APLEECVEAAERIRSF 392 (393)
T ss_pred CCCEEEEEec--CCHHHHHHHHHHHHHh
Confidence 246888654 4789999999999764
No 188
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.91 E-value=9.4e-22 Score=195.36 Aligned_cols=328 Identities=13% Similarity=0.086 Sum_probs=203.6
Q ss_pred HHHHHHHHHHHhhccc----cccCCCCCHHHHHHHHHHHhhcC--CCCCeEEEcCCchHHHHHHHHHHH-HhhhhcCCCC
Q psy14484 53 SYINKALKNQLNKLEH----VMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAVEVALKMSF-HYWYNKGFLN 125 (430)
Q Consensus 53 p~v~~a~~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgteA~~~al~~~~-~~~~~~g~~~ 125 (430)
..+.+++.+.+..... +....+..++++.+++.+.+..+ .++++|++|+|+++|+..+++++. . +
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~--------~ 162 (481)
T PTZ00377 91 ADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGD--------P 162 (481)
T ss_pred HHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccC--------C
Confidence 3567777665554321 12222334566677777665432 567899999999999999999876 3 5
Q ss_pred CcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC--CCCCCCCChhHHHHHHHHHHHHHHHhC---CC
Q psy14484 126 KKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS--RNINKGNSANEIARCAIFDLEILLKKN---HN 200 (430)
Q Consensus 126 ~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~~~le~~l~~~---~~ 200 (430)
++.|++..|+|.++.......+. ..+.++.... +.. |+++|++.+... ..
T Consensus 163 gD~Vlv~~P~y~~y~~~~~~~g~-------------~~v~v~~~~~~~~~~------------d~~~l~~~l~~~~~~~~ 217 (481)
T PTZ00377 163 SDGVMIPIPQYPLYSAAITLLGG-------------KQVPYYLDEEKGWSL------------DQEELEEAYEQAVRNGI 217 (481)
T ss_pred CCEEEECCCCchhHHHHHHHcCC-------------EEEEEEeccccCCCC------------CHHHHHHHHHHHHhcCC
Confidence 68899999999987554443332 1223332211 111 789999888642 12
Q ss_pred CeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcc-ccc-cc-cc-CCCCC------cee---
Q psy14484 201 KIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTG-KFF-AC-EH-AEIWP------DFL--- 267 (430)
Q Consensus 201 ~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g-~~~-~~-~~-~~~~~------d~~--- 267 (430)
+++++++.. ++|++| ...+.+.+++|.++|++||+++|+||+|..+.+.+ ..+ .+ .. .++.+ .++
T Consensus 218 ~~k~l~l~~-P~NPTG-~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~ 295 (481)
T PTZ00377 218 TPRALVVIN-PGNPTG-QVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFH 295 (481)
T ss_pred CeeEEEEEC-CCCCCC-cCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEe
Confidence 576655555 678888 66788889999999999999999999999765432 111 11 00 01111 233
Q ss_pred eeeccc-C-CCccccEEEEE---cHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--h---cCHHH-----
Q psy14484 268 CLSKGI-T-GGYLPLSLVMT---TDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--K---DNILQ----- 332 (430)
Q Consensus 268 ~~sK~l-~-gG~~~ig~~~~---~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~---~~~~~----- 332 (430)
+|||.+ + .| +|+|++++ ++++++.+.. . ....++.+.+++.++.++|+... + +.+.+
T Consensus 296 S~SK~~~~~~G-lRiG~~~~~~~p~~li~~l~~------~-~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~ 367 (481)
T PTZ00377 296 STSKGIIGECG-RRGGYFELTNIPPEVREQIYK------L-ASINLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAI 367 (481)
T ss_pred cCCcccccCCc-CceEEEEEeCCCHHHHHHHHH------H-hheecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHH
Confidence 689985 4 36 89999986 8888887765 1 22334567788888877774110 0 11222
Q ss_pred --HHHHHHHHHHHHHHchhcCCCeeeEeecceEEEE-EEeecCCccch-------hHHHHHH-HHHHHCCcEEeecC---
Q psy14484 333 --RISQDMKKITKALTSLITHPKIINFRQKGMIWAF-DVIIEDPEQIE-------TFSKKFF-VAALKNELLLRPIG--- 398 (430)
Q Consensus 333 --~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~-------~~a~~~~-~~l~~~Gv~~~~~~--- 398 (430)
.++++.+.+.+.|++ .+++....++|.|+.| .+. ....... .....++ +.|.++||.+.|+.
T Consensus 368 ~~~~~~rr~~l~~~L~~---~~g~~~~~p~gg~fl~~~~~-l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~ 443 (481)
T PTZ00377 368 FTSLKRRAELLTDELNK---IEGVSCQPVEGAMYAFPRIE-LPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFG 443 (481)
T ss_pred HHHHHHHHHHHHHHHhc---CCCcEeecCCeeEEEEeecc-CchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccC
Confidence 234445555555544 3455555666665554 332 1100000 0012343 45567799998752
Q ss_pred -----CEEEEeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 399 -----NTVYLMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 399 -----~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
+++|+++. .+++++++++++|++++.+..
T Consensus 444 ~~~~~~~~Rls~~--~~~e~l~~~l~rl~~~~~~~~ 477 (481)
T PTZ00377 444 QKPGTYHFRITIL--PPEEQIEEMVKKIKEFHESFM 477 (481)
T ss_pred CCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHHH
Confidence 37898765 778899999999999987643
No 189
>PRK08354 putative aminotransferase; Provisional
Probab=99.91 E-value=8.5e-22 Score=185.04 Aligned_cols=299 Identities=16% Similarity=0.165 Sum_probs=193.1
Q ss_pred CCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHH
Q psy14484 31 VSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVA 110 (430)
Q Consensus 31 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~a 110 (430)
.+...++||..| .++++ +|.+.+++.+.+.... .++. ...+++.+++.++ ++|++|+|+++|+..+
T Consensus 5 ~~~~~~i~l~~~--~np~~--p~~~~~a~~~~~~~~~-----~yp~--~~~l~~~ia~~~~---~~I~vt~G~~~al~~~ 70 (311)
T PRK08354 5 IREEGLIDFSAS--VNPYP--PEWLDEMFERAKEISG-----RYTY--YEWLEEEFSKLFG---EPIVITAGITEALYLI 70 (311)
T ss_pred CCccceeEecCC--CCCCC--CHHHHHHHHHHHHHhh-----cCCC--hHHHHHHHHHHHC---CCEEECCCHHHHHHHH
Confidence 345579999887 56665 5889999987765422 2322 3578888888885 5799999999999877
Q ss_pred HHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHH
Q psy14484 111 LKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFD 190 (430)
Q Consensus 111 l~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 190 (430)
+.++. +++.|++.+|+|.++...+...+. ..+..+. |++.
T Consensus 71 ~~~~~---------~gd~vlv~~P~y~~~~~~~~~~g~---------------~~~~~~~----------------d~~~ 110 (311)
T PRK08354 71 GILAL---------RDRKVIIPRHTYGEYERVARFFAA---------------RIIKGPN----------------DPEK 110 (311)
T ss_pred HHhhC---------CCCeEEEeCCCcHHHHHHHHHcCC---------------EEeecCC----------------CHHH
Confidence 65432 567899999999887554443322 1122221 6788
Q ss_pred HHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeee
Q psy14484 191 LEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS 270 (430)
Q Consensus 191 le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s 270 (430)
+++.++ ....+++++| +|++| ...+.+.+++|.++|+++|+++|+||+|.+|...+.. .. .....-+-+||
T Consensus 111 l~~~~~---~~~~vi~~~P--~NPTG-~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~--~~-~~~vi~~~S~S 181 (311)
T PRK08354 111 LEELVE---RNSVVFFCNP--NNPDG-KFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPES--PE-GENIIKLRTFT 181 (311)
T ss_pred HHHhhc---CCCEEEEecC--CCCCC-CccCHHHHHHHHHHhhhcCcEEEEeCcchhccccccc--cC-CCcEEEEeccH
Confidence 888775 2234555665 57788 5677888999999999999999999999988543321 11 11111233799
Q ss_pred cccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchh
Q psy14484 271 KGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI 349 (430)
Q Consensus 271 K~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~ 349 (430)
|.++ .| +|+|++++ +.+.+.. ....+..+.++.+++.+.++ +. .+++++..+++++..+.+.
T Consensus 182 K~~~l~G-lRiG~~v~---~~~~l~~--------~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~l~ 244 (311)
T PRK08354 182 KSYGLPG-IRVGYVKG---FEEAFRS--------VRMPWSIGSTGYAFLEFLIE----DD-FEHLRKTMPLIWREKERFE 244 (311)
T ss_pred hhcCCcc-ceeeeeee---hHHHHHH--------cCCCccCCHHHHHHHHHHHH----hH-HHHHHHHHHHHHHHHHHHH
Confidence 9998 67 89999998 4444543 11233445555444443333 11 2333333444444444331
Q ss_pred cCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-----CEEEEeCCCCCCHHHHHHHHHHHHHH
Q psy14484 350 THPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-----NTVYLMPPYILNKNEIQHMTSAIFQT 424 (430)
Q Consensus 350 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-----~~lR~~~~~~~t~e~i~~~~~~l~~~ 424 (430)
... ..++.|.++.+.+. + +.++++.|.++||.+.++. +++||+++ .+++.++++++|++.
T Consensus 245 ~~l---~~~~~~~~~~~~~~-~--------~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~---~~~~~~~l~~al~~~ 309 (311)
T PRK08354 245 KAL---YVKSDANFFIKDVG-D--------AEKFVEFLKRNGILVRDCTSFGLPGYIRFSVR---DREENEKLIRALREW 309 (311)
T ss_pred Hhc---CCCCCCcEEEEECC-C--------HHHHHHHHHHCCeEEEecccCCCCCeEEEEeC---CHHHHHHHHHHHHHh
Confidence 111 12456777766543 2 2568889999999999862 78999866 677778888777654
No 190
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.91 E-value=2.8e-22 Score=190.22 Aligned_cols=304 Identities=12% Similarity=0.080 Sum_probs=200.2
Q ss_pred CCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCC-CCeEEEcCCchHHHHHHH
Q psy14484 33 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYK-LGHCFYGSDGASAVEVAL 111 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~sgteA~~~al 111 (430)
..+++||.+| .+++|...+.+.. ..+. .|+.+. .+|++.+++.++.. +++|++++|++|++....
T Consensus 23 ~~~~i~ls~N--enp~~~~~~~~~~---~~~~--------~Yp~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~ 88 (339)
T PRK06959 23 YDAWLDLSTG--INPHGYPVPPVPA---DAWR--------RLPEDD-DGLAACAARYYGAPDAAHVLPVAGSQAAIRALP 88 (339)
T ss_pred hhhhceeccC--CCCCCCCCCCCCH---HHHH--------hCCCch-HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHH
Confidence 3578999999 6899976333321 1121 245554 78999999998865 479999999999998654
Q ss_pred HHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHH
Q psy14484 112 KMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDL 191 (430)
Q Consensus 112 ~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 191 (430)
.+ .. ++ .|++.+|+|.++.......+. ..+++|. +.+.+
T Consensus 89 ~~-~~--------~g-~v~v~~P~y~~y~~~~~~~g~---------------~~~~v~~----------------~~~~~ 127 (339)
T PRK06959 89 AL-LP--------RG-RVGIAPLAYSEYAPAFARHGH---------------RVVPLDE----------------AADTL 127 (339)
T ss_pred Hh-cC--------CC-eEEEcCCCcHHHHHHHHHCCC---------------EEEeecc----------------cchhc
Confidence 43 22 33 488899999887544433221 2222331 11111
Q ss_pred HHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCce---ee
Q psy14484 192 EILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDF---LC 268 (430)
Q Consensus 192 e~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~---~~ 268 (430)
++ ....+++++| +|++| ...+.+.++++.+.|+++++++|+||+|..|....+.... .. .+++ -|
T Consensus 128 ~~------~~~~v~l~nP--nNPTG-~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~--~~-~~~vi~l~S 195 (339)
T PRK06959 128 PA------ALTHLIVVNP--NNPTA-ERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAH--TD-RPGLVVLRS 195 (339)
T ss_pred cc------cCCEEEEeCC--CCCCC-CCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhc--cC-CCCEEEEec
Confidence 11 1124566666 57788 4567777899988899999999999999977432111111 11 2333 37
Q ss_pred eecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHH
Q psy14484 269 LSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKALT 346 (430)
Q Consensus 269 ~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-~~~~~~~~~~~~~~l~~~l~ 346 (430)
|||.++ .| +|+|++++++++++.+.. ....++.+.+++.++.++|+..+ .+...+.+++..+++.+.|+
T Consensus 196 fSK~~gl~G-lRiGy~v~~~~li~~l~~--------~~~~~~vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~ 266 (339)
T PRK06959 196 VGKFFGLAG-VRAGFVLAAPALLAALRD--------ALGAWTVSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLR 266 (339)
T ss_pred ChhhcCCcc-hheEEEecCHHHHHHHHH--------hcCCCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998 57 899999999999988876 23456667888888888775211 12344556666677777776
Q ss_pred chhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC--CEEEEeCCCCCCHHHHHHHHHHHHHH
Q psy14484 347 SLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG--NTVYLMPPYILNKNEIQHMTSAIFQT 424 (430)
Q Consensus 347 ~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~--~~lR~~~~~~~t~e~i~~~~~~l~~~ 424 (430)
++ ... +...++++++.+. + +.++.+.|.++||.+..++ +++||++ ..+++++++++++|+++
T Consensus 267 ~~-g~~----~~~~~~f~~~~~~-~--------~~~l~~~l~~~GI~vr~~~~~~~lRisi--~~~~~e~~~l~~al~~~ 330 (339)
T PRK06959 267 AH-GFA----VHATPLFSWTDDP-R--------AAALHAALARRGIWTRYFAPPPSVRFGL--PADEAEWQRLEDALAEC 330 (339)
T ss_pred HC-CCC----ccCcceEEEEeCC-C--------HHHHHHHHHhCCeEEEECCCCCeEEEEC--CCCHHHHHHHHHHHHHH
Confidence 65 221 1123555555433 2 3578999999999998764 6889974 24788999999999887
Q ss_pred HHHh
Q psy14484 425 FNEV 428 (430)
Q Consensus 425 l~~~ 428 (430)
++.+
T Consensus 331 ~~~~ 334 (339)
T PRK06959 331 VPTL 334 (339)
T ss_pred HHHH
Confidence 7654
No 191
>KOG0257|consensus
Probab=99.91 E-value=3.5e-23 Score=188.84 Aligned_cols=325 Identities=14% Similarity=0.151 Sum_probs=214.5
Q ss_pred HHHHHHHHHHhhc--cccccCCCCCHHHHHHHHHHHhhcC---CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcE
Q psy14484 54 YINKALKNQLNKL--EHVMLSNLTHKPVIKLSEKLSSLTQ---YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKK 128 (430)
Q Consensus 54 ~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~ 128 (430)
.|.+++++.+... ..+.+..+..++...|++++++.++ ...++|++|.|+.+|+..++...+. +.+.
T Consensus 48 fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~--------~GDe 119 (420)
T KOG0257|consen 48 FVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLN--------PGDE 119 (420)
T ss_pred HHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcC--------CCCE
Confidence 6778888888764 2234434445677888888888654 2345899999999999999998887 7889
Q ss_pred EEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEc
Q psy14484 129 FICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIE 208 (430)
Q Consensus 129 vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~e 208 (430)
|++++|.|..+.......++.+.+ ++....+. ..+..++ ..|.+.+|.++. +++++++++
T Consensus 120 Vii~eP~fd~Y~~~~~maG~tpv~-------------v~~~~~~g---~~~s~~~-~~D~~~le~~~t---~kTk~Ii~n 179 (420)
T KOG0257|consen 120 VIVFEPFFDCYIPQVVMAGGTPVF-------------VPLKPKEG---NVSSSDW-TLDPEELESKIT---EKTKAIILN 179 (420)
T ss_pred EEEecCcchhhhhHHhhcCCccee-------------eccccccc---cccCccc-cCChHHHHhhcc---CCccEEEEe
Confidence 999999999997776666654432 22110000 0011111 238899999996 678888888
Q ss_pred cccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc---ccccccCCC---CCceeeeecccCC-CccccE
Q psy14484 209 PLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK---FFACEHAEI---WPDFLCLSKGITG-GYLPLS 281 (430)
Q Consensus 209 p~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~---~~~~~~~~~---~~d~~~~sK~l~g-G~~~ig 281 (430)
. ++|++| -+.+.+.|++|+++|++||+++|.||||.-+...|. .++.. .|. ...+-++||+++- | |++|
T Consensus 180 t-PhNPtG-kvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~asl-Pgm~ertitvgS~gKtf~~TG-WrlG 255 (420)
T KOG0257|consen 180 T-PHNPTG-KVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASL-PGMYERTITVGSFGKTFGVTG-WRLG 255 (420)
T ss_pred C-CCCCcC-cccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecC-CchhheEEEeccccceeeeee-eeee
Confidence 8 899999 667889999999999999999999999997766764 23332 333 3345578998775 6 8999
Q ss_pred EEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHH---hhc-------CHHHHHHHHHHHHHHHHHchhcC
Q psy14484 282 LVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIF---NKD-------NILQRISQDMKKITKALTSLITH 351 (430)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~---~~~-------~~~~~~~~~~~~l~~~l~~l~~~ 351 (430)
|+++++.++..... ......+..+...+.|..+++..- .++ ++.+.++++.+.+.+.|+++ +.
T Consensus 256 W~igp~~L~~~~~~------vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~ 328 (420)
T KOG0257|consen 256 WAIGPKHLYSALFP------VHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL-GL 328 (420)
T ss_pred eeechHHhhhhHHH------HhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc-CC
Confidence 99998888776665 334445555555555555554321 111 24566788888888888877 32
Q ss_pred CCeeeEeecceEEEE-EEee-cCCccchhH-----HHHHHHHHHHC-CcEEeec------------CCEEEEeCCCCCCH
Q psy14484 352 PKIINFRQKGMIWAF-DVII-EDPEQIETF-----SKKFFVAALKN-ELLLRPI------------GNTVYLMPPYILNK 411 (430)
Q Consensus 352 ~~~~~~~~~g~~~~~-~~~~-~~~~~~~~~-----a~~~~~~l~~~-Gv~~~~~------------~~~lR~~~~~~~t~ 411 (430)
+ ...++|.++.+ ++.. .+.+..+.. ...++++|.++ |+.+.|. ++.+|| .++-++
T Consensus 329 ~---v~~p~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~--~~~k~~ 403 (420)
T KOG0257|consen 329 K---VTGPEGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRF--CFCKAD 403 (420)
T ss_pred c---cccCCCceEEEEeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHH--HHHhhH
Confidence 2 33456666554 3320 000000000 13566766544 7777763 123444 556778
Q ss_pred HHHHHHHHHHH
Q psy14484 412 NEIQHMTSAIF 422 (430)
Q Consensus 412 e~i~~~~~~l~ 422 (430)
+.++..+++|+
T Consensus 404 ~~L~~a~e~l~ 414 (420)
T KOG0257|consen 404 ETLRKAIERLK 414 (420)
T ss_pred HHHHHHHHHHh
Confidence 88888888887
No 192
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.91 E-value=1.9e-22 Score=193.06 Aligned_cols=296 Identities=14% Similarity=0.089 Sum_probs=196.6
Q ss_pred CCCHHHHHHHHHHHhhcC--CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCcc
Q psy14484 74 LTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 151 (430)
Q Consensus 74 ~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~ 151 (430)
...+..+.+++.+...++ ...+++++++|+++|+..++..+.. .+++|++..++|+++.......
T Consensus 37 ~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~--------~g~~vl~~~~~~~~~~~~~~~~----- 103 (350)
T cd00609 37 GLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLN--------PGDEVLVPDPTYPGYEAAARLA----- 103 (350)
T ss_pred CcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCC--------CCCEEEEcCCCchhHHHHHHHC-----
Confidence 334555666666665542 2367899999999999999998754 4678888888887764333221
Q ss_pred chhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHH
Q psy14484 152 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 231 (430)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l 231 (430)
......++........ .+.+.++... .++++++++++ +++++|. ..+.+.+++|.++
T Consensus 104 --------~~~~~~i~~~~~~~~~----------~~~~~~~~~~---~~~~~~v~i~~-~~~~tG~-~~~~~~l~~l~~~ 160 (350)
T cd00609 104 --------GAEVVPVPLDEEGGFL----------LDLELLEAAK---TPKTKLLYLNN-PNNPTGA-VLSEEELEELAEL 160 (350)
T ss_pred --------CCEEEEEecccccCCc----------cCHHHHHhhc---CccceEEEEEC-CCCCCCc-ccCHHHHHHHHHH
Confidence 1223344433221110 0113444433 36789999999 9999995 5567889999999
Q ss_pred HHhcCCEEEEeccccCCCCcccccc----cccCCCCCceeeeecccC-CCccccEEEEEcH-HHHHhhhccCCccccccc
Q psy14484 232 CNNYNIHLIADEIAVGCGRTGKFFA----CEHAEIWPDFLCLSKGIT-GGYLPLSLVMTTD-KIYNSIYYKNNINIFLHS 305 (430)
Q Consensus 232 ~~~~gi~li~DEv~~g~g~~g~~~~----~~~~~~~~d~~~~sK~l~-gG~~~ig~~~~~~-~~~~~~~~~~~~~~~~~~ 305 (430)
|+++|+++|+||+++++...+.... ....+....+.+++|.++ +| .++|++++++ ++.+.+.. ....
T Consensus 161 ~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g-~~~G~i~~~~~~~~~~~~~------~~~~ 233 (350)
T cd00609 161 AKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPG-LRIGYLIAPPEELLERLKK------LLPY 233 (350)
T ss_pred HHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcc-cceEEEecCHHHHHHHHHH------HHHh
Confidence 9999999999999997765443221 111222222347899998 56 7999999998 78877765 2233
Q ss_pred CCCCCCHHHHHHHHHHHHHH--hhcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHH
Q psy14484 306 HSYSGNPLACCAALATLEIF--NKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKF 383 (430)
Q Consensus 306 ~t~~~~~~~~~aa~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~ 383 (430)
.++..+..++.++..+++.. ..+...++++++.+++.+.|++.... .. .....|.++++.+. ... .+..+
T Consensus 234 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~-~~~~~g~~~~~~~~-~~~-----~~~~~ 305 (350)
T cd00609 234 TTSGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELGPL-VV-VKPSGGFFLWLDLP-EGD-----DEEFL 305 (350)
T ss_pred cccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhcCCc-cc-cCCCccEEEEEecC-CCC-----hHHHH
Confidence 45667777777777777654 22445566777777888887765211 11 23455777777665 320 13456
Q ss_pred HHHHHHCCcEEeec-------CCEEEEeCCCCCCHHHHHHHHHHHH
Q psy14484 384 FVAALKNELLLRPI-------GNTVYLMPPYILNKNEIQHMTSAIF 422 (430)
Q Consensus 384 ~~~l~~~Gv~~~~~-------~~~lR~~~~~~~t~e~i~~~~~~l~ 422 (430)
.+.|.+.||.+.++ +.++|++++.. ++|++.++++|+
T Consensus 306 ~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 306 ERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred HHHHHhCCEEEecccccccCCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 67777889998875 36899998877 999999999886
No 193
>PRK07777 aminotransferase; Validated
Probab=99.91 E-value=1.7e-21 Score=188.99 Aligned_cols=335 Identities=8% Similarity=0.020 Sum_probs=209.1
Q ss_pred EEEecccccccccCCCCCHHHHHHHHHHHhhcc-ccccCCCCCHHHHHHHHHHHhhcCC--CCC-eEEEcCCchHHHHHH
Q psy14484 35 RYLDAISSWWVNLFGHSNSYINKALKNQLNKLE-HVMLSNLTHKPVIKLSEKLSSLTQY--KLG-HCFYGSDGASAVEVA 110 (430)
Q Consensus 35 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~--~~~-~v~~~~sgteA~~~a 110 (430)
.++||..|.. ... .++.+.+++.+.+.... .+....+..++++.+++.+.+.++. .++ +|++|+|+++|+..+
T Consensus 25 ~~i~l~~g~p--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~ 101 (387)
T PRK07777 25 GAVNLGQGFP--DED-GPPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAA 101 (387)
T ss_pred CeEEccCCCC--CCC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHH
Confidence 5688887753 232 25677787777665321 1121223345566677766665543 344 699999999999998
Q ss_pred HHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCC-CCCCCCChhHHHHHHHH
Q psy14484 111 LKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSR-NINKGNSANEIARCAIF 189 (430)
Q Consensus 111 l~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~ 189 (430)
+..... +++.|++..++|+++.......+. ....++..+.. .. ..|++
T Consensus 102 ~~~~~~--------~gd~vli~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~----------~~d~~ 150 (387)
T PRK07777 102 VLGLVE--------PGDEVLLIEPYYDSYAAVIAMAGA-------------HRVPVPLVPDGRGF----------ALDLD 150 (387)
T ss_pred HHHhcC--------CCCEEEEeCCCchhhHHHHHHCCC-------------EEEEeecCCccCCC----------cCCHH
Confidence 886653 567899999999876433222211 11223322110 00 01788
Q ss_pred HHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc-cccccc-CCCC-Cc-
Q psy14484 190 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-FFACEH-AEIW-PD- 265 (430)
Q Consensus 190 ~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~-~~~~~~-~~~~-~d- 265 (430)
+|++.+. +++++|++++ ++|++|. ..+.+.+++|.++|+++++++|+||+|.++...+. ...+.. .+.. .+
T Consensus 151 ~l~~~~~---~~~~~v~l~~-p~NPtG~-~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i 225 (387)
T PRK07777 151 ALRAAVT---PRTRALIVNS-PHNPTGT-VLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTV 225 (387)
T ss_pred HHHHhcC---cccEEEEEcC-CCCCCCc-cCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEE
Confidence 8888875 4567777777 8889985 55788899999999999999999999987754332 111111 1111 12
Q ss_pred -eeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--hcCHHHHHHHHHHHH
Q psy14484 266 -FLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQDMKKI 341 (430)
Q Consensus 266 -~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~~~~l 341 (430)
+.+|||.++ .| +|+|++++++++.+.+.. .....++..+.+.+.++..++...+ .....+.++++.+.+
T Consensus 226 ~~~S~SK~~g~~G-lRiG~~~~~~~l~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l 298 (387)
T PRK07777 226 TISSAAKTFNVTG-WKIGWACGPAPLIAAVRA------AKQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRL 298 (387)
T ss_pred EEeechhhccCcC-ceeEEEecCHHHHHHHHH------HHhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHH
Confidence 347999998 46 899999999998877764 1222344445555555555553211 122345566667777
Q ss_pred HHHHHchhcCCCeeeEeecceE-EEEEEeecCCccchhHHHHHHHHHH-HCCcEEeecC----------CEEEEeCCCCC
Q psy14484 342 TKALTSLITHPKIINFRQKGMI-WAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPIG----------NTVYLMPPYIL 409 (430)
Q Consensus 342 ~~~l~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~~----------~~lR~~~~~~~ 409 (430)
.+.|+++ . +....+.|.+ +++.+. .... .. +.++++.|+ ++||.+.|+. +.+|++++ .
T Consensus 299 ~~~L~~~-~---~~~~~~~g~~~~~~~~~-~~~~-~~--~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~--~ 368 (387)
T PRK07777 299 AAGLAEA-G---FEVHDSAGTYFLCADPR-PLGY-DD--GTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFC--K 368 (387)
T ss_pred HHHHHhC-C---CCccCCCcceEEEeccc-ccCC-CC--HHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEec--C
Confidence 7777654 2 2222344454 444543 2111 11 367899986 5799998741 36888765 4
Q ss_pred CHHHHHHHHHHHHHHH
Q psy14484 410 NKNEIQHMTSAIFQTF 425 (430)
Q Consensus 410 t~e~i~~~~~~l~~~l 425 (430)
+++++++++++|++..
T Consensus 369 ~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 369 RDDTLDEAIRRLRALR 384 (387)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 7999999999998764
No 194
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.91 E-value=6.3e-22 Score=189.69 Aligned_cols=318 Identities=11% Similarity=0.006 Sum_probs=204.1
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC---CCCCeEEEcCCchHHHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ---YKLGHCFYGSDGASAVE 108 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~v~~~~sgteA~~ 108 (430)
++..++|+.++. +....+|.+.+++++...... +..+.+..++++++++.+.+..+ .++++|++|+|+++++.
T Consensus 19 ~~~~~i~l~~~~---p~~~~~~~~~~~~~~~~~~~~-Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~ 94 (357)
T TIGR03539 19 HPDGIVDLSVGT---PVDPVPPLIRAALAAAADAPG-YPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVA 94 (357)
T ss_pred CCCCeEEccCCC---CCCCCCHHHHHHHHHHHhhCC-CCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHH
Confidence 566789988863 223346788888877543222 22223444667788888776543 56789999999999999
Q ss_pred HHHHHH-HHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHH
Q psy14484 109 VALKMS-FHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCA 187 (430)
Q Consensus 109 ~al~~~-~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 187 (430)
.++.++ .. +++.|++.+++|.++.......+. ..+.++ +
T Consensus 95 ~~~~~l~~~--------~gd~Vl~~~p~y~~~~~~~~~~g~---------------~~~~v~-----------------~ 134 (357)
T TIGR03539 95 WLPTLLGLG--------PGDTVVIPELAYPTYEVGALLAGA---------------TPVAAD-----------------D 134 (357)
T ss_pred HHHHHHcCC--------CCCEEEECCCCcHHHHHHHHhcCC---------------EEeccC-----------------C
Confidence 887765 33 678899999999877443222111 223332 3
Q ss_pred HHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccc-ccc--CC-CC
Q psy14484 188 IFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA-CEH--AE-IW 263 (430)
Q Consensus 188 ~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~-~~~--~~-~~ 263 (430)
++.++ +.++++++++. ++|++| ...+.+.+++|.++|++||+++|+||+|..+...+.... +.. .+ ..
T Consensus 135 ~~~l~------~~~~~~v~~~~-p~NPtG-~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~ 206 (357)
T TIGR03539 135 PTELD------PVGPDLIWLNS-PGNPTG-RVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDH 206 (357)
T ss_pred hhhcC------ccCccEEEEeC-CCCCcC-ccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCcc
Confidence 33322 24577777777 888888 556778899999999999999999999987755443211 110 00 11
Q ss_pred ---CceeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-hcCHHHHHHHHH
Q psy14484 264 ---PDFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDM 338 (430)
Q Consensus 264 ---~d~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-~~~~~~~~~~~~ 338 (430)
.-+.+|||.++ .| +|+|++++++++++.+.. ......++.+.+++.++.++|+..+ .....+.++++.
T Consensus 207 ~~vi~~~S~SK~~~~~G-~R~G~~i~~~~~~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 279 (357)
T TIGR03539 207 TGLLAVHSLSKRSNLAG-YRAGFVAGDPALVAELLT------VRKHAGLMVPAPVQAAMVAALGDDGHVAEQKARYAARR 279 (357)
T ss_pred ccEEEEeccccccCCCc-eeEEEEecCHHHHHHHHH------HHhhcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 11237999975 46 899999999998887754 2223345667777777766664211 122344455555
Q ss_pred HHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-------CCEEEEeCCCCCCH
Q psy14484 339 KKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-------GNTVYLMPPYILNK 411 (430)
Q Consensus 339 ~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-------~~~lR~~~~~~~t~ 411 (430)
+++.+.|++. + +...++.|.++.+... .. . +..+.+.|.++||.+.|+ .+++|++++ .++
T Consensus 280 ~~~~~~L~~~---g-~~~~~p~~~~~~~~~~-~~---~---~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~~--~~~ 346 (357)
T TIGR03539 280 AQLKPALEKA---G-FRIDHSEAGLYLWATR-GE---D---AWDTVDRLAELGILVAPGDFYGPAGSQHVRVALT--ATD 346 (357)
T ss_pred HHHHHHHHHc---C-CCCcCCCccEEEEEEC-CC---C---HHHHHHHHHhCCEEECCccccCCCCCCeEEEEec--CCH
Confidence 5666666543 2 2223344555444333 21 1 356888899999999875 268899765 478
Q ss_pred HHHHHHHHHH
Q psy14484 412 NEIQHMTSAI 421 (430)
Q Consensus 412 e~i~~~~~~l 421 (430)
+++++++++|
T Consensus 347 ~~i~~~~~~l 356 (357)
T TIGR03539 347 ERIAAAVARL 356 (357)
T ss_pred HHHHHHHHhh
Confidence 9999999876
No 195
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.91 E-value=2.5e-22 Score=190.29 Aligned_cols=298 Identities=13% Similarity=0.160 Sum_probs=193.0
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKM 113 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~ 113 (430)
.+.++|..|. ++++. | +.+. ...... .++++...++++.+++.++.+++++++++|+++++..+.++
T Consensus 17 ~~~~~~~~~~--~~~~~--~-~~~~---~~~~~~-----~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~~ 83 (330)
T TIGR01140 17 EDWLDFSTGI--NPLGP--P-VPPI---PASAWA-----RYPDPEYDELRAAAAAYYGLPAASVLPVNGAQEAIYLLPRL 83 (330)
T ss_pred hheeEccccC--CCCCC--C-hhhc---chHHHh-----hCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHH
Confidence 4578988874 55553 3 2221 111111 23333347888888888877788999999999999986555
Q ss_pred HHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHH
Q psy14484 114 SFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEI 193 (430)
Q Consensus 114 ~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~ 193 (430)
+ . ++ +|++.+|+|+.+....... +...+.+| |++++++
T Consensus 84 l-~--------~g-~vl~~~p~y~~~~~~~~~~---------------g~~~~~~~-----------------d~~~l~~ 121 (330)
T TIGR01140 84 L-A--------PG-RVLVLAPTYSEYARAWRAA---------------GHEVVELP-----------------DLDRLPA 121 (330)
T ss_pred h-C--------CC-eEEEeCCCcHHHHHHHHHc---------------CCEEEEeC-----------------CHHHHHh
Confidence 3 2 34 6888899998764332211 11233333 5677877
Q ss_pred HHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCcee---eee
Q psy14484 194 LLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL---CLS 270 (430)
Q Consensus 194 ~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~---~~s 270 (430)
.++ ++.++++.. ++|++| ..++.+.+++|.++|+++|+++|+||+|.++....... ...+..++++ +||
T Consensus 122 ~~~----~~~~v~i~~-p~NPtG-~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~--~~~~~~~~~i~~~S~S 193 (330)
T TIGR01140 122 ALE----ELDVLVLCN-PNNPTG-RLIPPETLLALAARLRARGGWLVVDEAFIDFTPDASLA--PQAARFPGLVVLRSLT 193 (330)
T ss_pred hcc----cCCEEEEeC-CCCCCC-CCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccchh--hHhccCCCEEEEEecc
Confidence 774 233555555 567888 56788889999999999999999999998775332111 1111123333 799
Q ss_pred cccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCH----HHHHHHHHHHHHHHH
Q psy14484 271 KGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNI----LQRISQDMKKITKAL 345 (430)
Q Consensus 271 K~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~----~~~~~~~~~~l~~~l 345 (430)
|.++ .| +|+|++++++++++.+.. ....+..+.+++.++.+.++ +.++ .++++++.+++.+.|
T Consensus 194 K~~g~~G-~R~G~i~~~~~~~~~l~~--------~~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L 261 (330)
T TIGR01140 194 KFFGLAG-LRLGFVVAHPALLARLRE--------ALGPWTVNGPARAAGRAALA---DTAWQAATRARLAAERARLAALL 261 (330)
T ss_pred hhhcCch-hhhhheeCCHHHHHHHHh--------cCCCCCchHHHHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHH
Confidence 9998 56 899999999999888776 23355667777777766665 3333 344555555555555
Q ss_pred HchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-------CCEEEEeCCCCCCHHHHHHHH
Q psy14484 346 TSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-------GNTVYLMPPYILNKNEIQHMT 418 (430)
Q Consensus 346 ~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-------~~~lR~~~~~~~t~e~i~~~~ 418 (430)
+++ +.+...++.|.|+++.+. . ..++++.|+++||.+.|+ .+++|++++ ...++ +.++
T Consensus 262 ~~~---~~~~~~~~~~~f~~~~~~-~--------~~~l~~~l~~~gi~v~pg~~f~~~~~~~iRi~~~--~~~~~-~~~~ 326 (330)
T TIGR01140 262 ARL---GGLEVVGGTALFLLVRTP-D--------AAALHEALARRGILIRDFDNFPGLDPRYLRFALP--TDEEN-DRLE 326 (330)
T ss_pred HhC---CCceECCCCCeEEEEEcC-C--------HHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEec--CHHHH-HHHH
Confidence 543 433333455677776655 2 257899999999999985 157999765 33344 7777
Q ss_pred HHH
Q psy14484 419 SAI 421 (430)
Q Consensus 419 ~~l 421 (430)
++|
T Consensus 327 ~~l 329 (330)
T TIGR01140 327 EAL 329 (330)
T ss_pred Hhh
Confidence 665
No 196
>PRK07337 aminotransferase; Validated
Probab=99.91 E-value=1.4e-21 Score=189.56 Aligned_cols=336 Identities=13% Similarity=0.065 Sum_probs=211.2
Q ss_pred CCEEEecccccccccCCCCCHHHHHHHHHHHhhcc-ccccCCCCCHHHHHHHHHHHhhcC--CCCCeEEEcCCchHHHHH
Q psy14484 33 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLE-HVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAVEV 109 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgteA~~~ 109 (430)
+..++||..+. ..++ .+|.+.+++.+.+.... .+....+..++++.+++.+.+.++ .++++|++|+|+++|+..
T Consensus 29 ~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~ 105 (388)
T PRK07337 29 GRDIIHMGIGE--PDFT-APEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLL 105 (388)
T ss_pred CCCEEEeCCcC--CCCC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHH
Confidence 44678877763 3333 36788999888775321 111122334555666666665443 467899999999999999
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC--CCCCCCCCChhHHHHHH
Q psy14484 110 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD--SRNINKGNSANEIARCA 187 (430)
Q Consensus 110 al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d 187 (430)
++.+... +++.|++.+|+|.++......... ....++.+. .+.. |
T Consensus 106 ~~~~l~~--------~gd~Vlv~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~------------~ 152 (388)
T PRK07337 106 ACLALVE--------RGDEVLMPDPSYPCNRHFVAAAEG-------------RPVLVPSGPAERFQL------------T 152 (388)
T ss_pred HHHHhcC--------CCCEEEEeCCCchhhHHHHHHcCC-------------EEEEeecCCccCCcC------------C
Confidence 8887754 668899999999876433222111 122333321 1111 7
Q ss_pred HHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCcee
Q psy14484 188 IFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL 267 (430)
Q Consensus 188 ~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~ 267 (430)
++++++.+. ++++++++.. ++|++| ...+.+.+++|.++|+++++++|+||+|.++...+.... .....++++
T Consensus 153 ~~~l~~~~~---~~~~~v~l~~-p~NPtG-~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~--~~~~~~~vi 225 (388)
T PRK07337 153 AADVEAAWG---ERTRGVLLAS-PSNPTG-TSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVS--ALSLGDDVI 225 (388)
T ss_pred HHHHHhhcC---ccceEEEEEC-CCCCCC-cCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcC--hhhccCCEE
Confidence 788888775 3556666655 677888 566788899999999999999999999998765443111 112234443
Q ss_pred ---eeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHH--Hh-hcCHHHHHHHHHHH
Q psy14484 268 ---CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEI--FN-KDNILQRISQDMKK 340 (430)
Q Consensus 268 ---~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~--~~-~~~~~~~~~~~~~~ 340 (430)
+|||.++ .| +|+|++++++++++.+.. .......+.+.+++.++..+++. .+ -....+.++++.++
T Consensus 226 ~~~S~SK~~~~~G-~RiG~~~~~~~l~~~l~~------~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~ 298 (388)
T PRK07337 226 TINSFSKYFNMTG-WRLGWLVVPEALVGTFEK------LAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDF 298 (388)
T ss_pred EEEechhhcCCch-hheeeeecCHHHHHHHHH------HHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHH
Confidence 6899996 46 899999999998887765 11222334567777776666541 00 01223444555555
Q ss_pred HHHHHHchhcCCCeee-EeecceEEEEEEeecCCc-cchhHHHHHHHHH-HHCCcEEeec--------CCEEEEeCCCCC
Q psy14484 341 ITKALTSLITHPKIIN-FRQKGMIWAFDVIIEDPE-QIETFSKKFFVAA-LKNELLLRPI--------GNTVYLMPPYIL 409 (430)
Q Consensus 341 l~~~l~~l~~~~~~~~-~~~~g~~~~~~~~~~~~~-~~~~~a~~~~~~l-~~~Gv~~~~~--------~~~lR~~~~~~~ 409 (430)
+.+.|++. +.... .+..|.++++.+. .... ...+ +.++++.+ .++||.+.|+ .+++|++++.
T Consensus 299 ~~~~L~~~---~~~~~~~p~~g~f~~~~~~-~~~~~~~~~-~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~-- 371 (388)
T PRK07337 299 IVPALESL---GFKVPVMPDGAFYVYADCR-GVAHPAAGD-SAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT-- 371 (388)
T ss_pred HHHHHHhc---CCccccCCCeeEEEEEecc-cccCCCCCC-HHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC--
Confidence 65665543 22111 2334677777765 3110 0001 35677764 5679999874 2588997763
Q ss_pred CHHHHHHHHHHHHHHH
Q psy14484 410 NKNEIQHMTSAIFQTF 425 (430)
Q Consensus 410 t~e~i~~~~~~l~~~l 425 (430)
+++++.+.+++|.+++
T Consensus 372 ~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 372 SMSRLEEAVARLGKLF 387 (388)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 6899999999998764
No 197
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.91 E-value=2.5e-21 Score=187.92 Aligned_cols=335 Identities=16% Similarity=0.087 Sum_probs=210.1
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhccc----cccCCCCCHHHHHHHHHHHhhc--CCCCCeEEEcCCchHHH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEH----VMLSNLTHKPVIKLSEKLSSLT--QYKLGHCFYGSDGASAV 107 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~~~--~~~~~~v~~~~sgteA~ 107 (430)
..++||..+.. .+ ..++.+.+++.+.+..... +....+..+.+..+++.+.+.. ++++++|++++|+++++
T Consensus 33 ~~~~~l~~g~p--~~-~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al 109 (394)
T PRK06836 33 DNVFDFSLGNP--SV-PPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGAL 109 (394)
T ss_pred CCeEEecCcCC--CC-CCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHH
Confidence 46789877632 22 2467888888876653211 1111222345555666665443 34678999999999999
Q ss_pred HHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC-CCCCCCCChhHHHHH
Q psy14484 108 EVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS-RNINKGNSANEIARC 186 (430)
Q Consensus 108 ~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 186 (430)
..+++.++. +++.|++.+++|.++...... ...++..++.+.+ +..
T Consensus 110 ~~~~~~l~~--------~gd~Vli~~p~~~~~~~~~~~-------------~g~~v~~v~~~~~~~~~------------ 156 (394)
T PRK06836 110 NVALKAILN--------PGDEVIVFAPYFVEYRFYVDN-------------HGGKLVVVPTDTDTFQP------------ 156 (394)
T ss_pred HHHHHHhcC--------CCCEEEEcCCCCccHHHHHHH-------------cCCEEEEEecCCccCcC------------
Confidence 999887754 567899999999876433222 1223344443322 122
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHh------cCCEEEEeccccCCCCcccccc--cc
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNN------YNIHLIADEIAVGCGRTGKFFA--CE 258 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~------~gi~li~DEv~~g~g~~g~~~~--~~ 258 (430)
|++++++.++ ++++++++.. ++|++| ...+.+.+++|.++|++ ||+++|+||+|..+...+.... ..
T Consensus 157 d~~~l~~~~~---~~~~~v~~~~-p~NPtG-~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~ 231 (394)
T PRK06836 157 DLDALEAAIT---PKTKAVIINS-PNNPTG-VVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFK 231 (394)
T ss_pred CHHHHHhhcC---cCceEEEEeC-CCCCCC-cCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHH
Confidence 7899999885 4677888877 888888 55667779999999999 8999999999997754432111 11
Q ss_pred cCCCCCceeeeecccC-CCccccEEEEEcHHHHHh--hhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHH
Q psy14484 259 HAEIWPDFLCLSKGIT-GGYLPLSLVMTTDKIYNS--IYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRIS 335 (430)
Q Consensus 259 ~~~~~~d~~~~sK~l~-gG~~~ig~~~~~~~~~~~--~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~ 335 (430)
..+...-+-+|||.++ .| +|+|++++++++.+. +... ..........+..+.+.+.++...++ +....+.++
T Consensus 232 ~~~~~i~~~S~SK~~~~pG-lRiG~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~ 306 (394)
T PRK06836 232 YYDNSIVVYSFSKSLSLPG-ERIGYIAVNPEMEDADDLVAA-LVFANRILGFVNAPALMQRVVAKCLD---ATVDVSIYK 306 (394)
T ss_pred ccCcEEEEecchhhccCcc-eeeEEEecCHHHhhhHHHHHH-HHHHhhccccccCCHHHHHHHHHHhC---ChHHHHHHH
Confidence 1111112236899998 57 899999998876322 1100 00000011123445565655554443 222244556
Q ss_pred HHHHHHHHHHHchhcCCCeeeEeecc-eEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-----CCEEEEeCCCCC
Q psy14484 336 QDMKKITKALTSLITHPKIINFRQKG-MIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----GNTVYLMPPYIL 409 (430)
Q Consensus 336 ~~~~~l~~~l~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-----~~~lR~~~~~~~ 409 (430)
+..+.+.+.|++. . +....+.| .++++.+. . . . ..++++.|.++||.+.|+ ++++||+++ .
T Consensus 307 ~~r~~l~~~L~~~---g-~~~~~~~gg~~~~~~~~-~-~--~---~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~--~ 373 (394)
T PRK06836 307 RNRDLLYDGLTEL---G-FECVKPQGAFYLFPKSP-E-E--D---DVAFCEKAKKHNLLLVPGSGFGCPGYFRLSYC--V 373 (394)
T ss_pred HHHHHHHHHHHhC---C-CEeecCCceEEEEEeCC-C-C--C---HHHHHHHHHhCCEEEECchhcCCCCeEEEEec--C
Confidence 6666666666553 2 22334444 45544444 2 1 1 356788889999999986 378999876 5
Q ss_pred CHHHHHHHHHHHHHHHHH
Q psy14484 410 NKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 410 t~e~i~~~~~~l~~~l~~ 427 (430)
+++++++++++|++++++
T Consensus 374 ~~~~~~~~i~~l~~~l~~ 391 (394)
T PRK06836 374 DTETIERSLPAFEKLAKE 391 (394)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 899999999999999875
No 198
>PRK06855 aminotransferase; Validated
Probab=99.91 E-value=1.9e-21 Score=190.64 Aligned_cols=348 Identities=14% Similarity=0.088 Sum_probs=206.4
Q ss_pred CCCEEEecccccccccCCCC-CHHHHHHHHHHHhhccc--cccCCCCCHHHHHHHHHHHhhcC--CCCCeEEEcCCchHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHS-NSYINKALKNQLNKLEH--VMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASA 106 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~-~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgteA 106 (430)
.|+.++++..|.. ...+.. ++.+.+++.+.+..... +....+..++++.+++++.+..+ .++++|++|+|+++|
T Consensus 30 ~g~~~~~~~~G~p-~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~a 108 (433)
T PRK06855 30 LGVKITWENIGDP-IAKGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDA 108 (433)
T ss_pred ccccccccccCCC-cccCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHH
Confidence 3556667644421 112444 56777788877644221 12223344667777777776533 567899999999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC--CCCCCCCCChhHHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD--SRNINKGNSANEIA 184 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 184 (430)
+..++. +.. +++.|++.+|+|+++........+ .....++... .+..
T Consensus 109 l~~~~~-l~~--------~Gd~Vlv~~P~Y~~~~~~~~~~~g------------~~~v~v~~~~~~~~~~---------- 157 (433)
T PRK06855 109 IAKIYG-LLR--------REARVIGPSPAYSTHSSAEAAHAG------------YPPVTYRLDPENNWYP---------- 157 (433)
T ss_pred HHHHHH-hcC--------CCCeEEEeCCCCchHHHHHHHhcC------------CeEEEEecccccCCCC----------
Confidence 998875 332 568899999999986432221111 0112222211 1111
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccc-cc-ccC-C
Q psy14484 185 RCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-AC-EHA-E 261 (430)
Q Consensus 185 ~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~-~~-~~~-~ 261 (430)
|+++|++.++.. .+++++++.. ++|++| ...+.+.+++|.++|++||+++|.||+|..+.+.+... .+ ... +
T Consensus 158 --d~~~l~~~~~~~-~~~~~i~l~~-P~NPTG-~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~ 232 (433)
T PRK06855 158 --DLDDLENKVKYN-PSIAGILLIN-PDNPTG-AVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGD 232 (433)
T ss_pred --CHHHHHHHHhcC-CCceEEEEEC-CCCCCC-cCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCc
Confidence 789999998643 2445555445 678888 67788889999999999999999999999885544311 11 111 1
Q ss_pred -CCCceeeeecccC-CCccccEEEEEc-----H---HHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCH-
Q psy14484 262 -IWPDFLCLSKGIT-GGYLPLSLVMTT-----D---KIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNI- 330 (430)
Q Consensus 262 -~~~d~~~~sK~l~-gG~~~ig~~~~~-----~---~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~- 330 (430)
...-+-+|||.++ .| +|+|+++++ + .+++.+.. . .....+.+.+++.++.++++.-.-+.+
T Consensus 233 ~~~I~~~S~SK~~~~pG-lRiG~ii~p~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~Q~a~~~~l~~~~~~~~~ 304 (433)
T PRK06855 233 VPGIALKGISKELPWPG-SRCGWIEVYNADKDEVFKKYINSILN------A-KMIEVCSTTLPQMAIPRIMSHPEYKNYL 304 (433)
T ss_pred CCeEEEecCccccCCCc-ceEEEEEEeCCchhhHHHHHHHHHHH------h-hccccCCChHHHHHHHHhhcCCcHHHHH
Confidence 1112347999996 67 899999973 2 22333322 1 112334566777777666641100122
Q ss_pred ---HHHHHHHHHHHHHHHHchhcCCCeeeEeecce-EEEEEEeecCC--------cc---chh-----------HHHHHH
Q psy14484 331 ---LQRISQDMKKITKALTSLITHPKIINFRQKGM-IWAFDVIIEDP--------EQ---IET-----------FSKKFF 384 (430)
Q Consensus 331 ---~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~-~~~~~~~~~~~--------~~---~~~-----------~a~~~~ 384 (430)
.+.++++.+.+.+.|++ .+.+...++.|. ++++.+. ... .. ... ...+++
T Consensus 305 ~~~~~~~~~r~~~~~~~L~~---~~~~~~~~p~gg~~~w~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (433)
T PRK06855 305 KERNKRYEKRSNIAYEKLKD---VPGLKVNRTNGAFYMTVVFE-DGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFV 380 (433)
T ss_pred HHHHHHHHHHHHHHHHHHhc---CCCeeccCCCeeEEEeeccc-cccccccccCCcchhhhHHHHHHHHhcCCCchHHHH
Confidence 23334444444444443 334333455564 4555554 321 00 000 023455
Q ss_pred HH-HHHCCcEEeecC------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 385 VA-ALKNELLLRPIG------NTVYLMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 385 ~~-l~~~Gv~~~~~~------~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
.. +.+.||.+.|+. ..+|++++. .++++|++.+++|.+++.+.+
T Consensus 381 ~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~-~~~~~i~~~~~~l~~~~~~~~ 431 (433)
T PRK06855 381 YYLLASTGICVVPLSSFCTELNGFRVTLLE-RDEEKFEWIYQTLAEKIEEYL 431 (433)
T ss_pred HHHHHHcCEEEecCCcCCCCCCceEEEECC-CcHHHHHHHHHHHHHHHHHHh
Confidence 44 567799999862 358987764 579999999999999998754
No 199
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.91 E-value=1.3e-21 Score=188.21 Aligned_cols=318 Identities=11% Similarity=0.002 Sum_probs=202.6
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC---CCCCeEEEcCCchHHHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ---YKLGHCFYGSDGASAVE 108 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~v~~~~sgteA~~ 108 (430)
++..++||..+. +....+|.+.+++.+...... +..+.+..++++.+++.+.+..+ .++++|++|+|+++++.
T Consensus 25 ~~~~~i~l~~~~---p~~~~~~~~~~~~~~~~~~~~-Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~ 100 (364)
T PRK07865 25 HPDGIVDLSVGT---PVDPVPPVIQEALAAAADAPG-YPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVA 100 (364)
T ss_pred cCCCEEEcCCCC---CCCCCCHHHHHHHHHHHhhCC-CCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHH
Confidence 455688988763 333346888888876543321 22223334666778888776643 45789999999999999
Q ss_pred HHHHHH-HHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHH
Q psy14484 109 VALKMS-FHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCA 187 (430)
Q Consensus 109 ~al~~~-~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 187 (430)
.++.++ +. +++.|++.+++|.++.......+. ..+.++ +
T Consensus 101 ~~~~~l~~~--------~gd~Vl~~~p~y~~~~~~~~~~g~---------------~~~~~~-----------------~ 140 (364)
T PRK07865 101 WLPTLLGLG--------PGDVVVIPELAYPTYEVGARLAGA---------------TVVRAD-----------------S 140 (364)
T ss_pred HHHHHHcCC--------CCCEEEECCCCcccHHHHHHhcCC---------------EEEecC-----------------C
Confidence 877765 33 568899999999876433322111 222232 2
Q ss_pred HHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccc-ccc--CCCC-
Q psy14484 188 IFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA-CEH--AEIW- 263 (430)
Q Consensus 188 ~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~-~~~--~~~~- 263 (430)
+++++. .++++++++. ++|++| ...+.+.+++|.++|+++|+++|+||+|..+...+.... +.. .+..
T Consensus 141 ~~~l~~------~~~~~v~~~~-p~NPtG-~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~ 212 (364)
T PRK07865 141 LTELGP------QRPALIWLNS-PSNPTG-RVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDH 212 (364)
T ss_pred hhhCCc------ccceEEEEcC-CCCCCC-ccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCcc
Confidence 233221 3567777777 888998 556678899999999999999999999997755443211 111 0111
Q ss_pred Cc---eeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-hcCHHHHHHHHH
Q psy14484 264 PD---FLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDM 338 (430)
Q Consensus 264 ~d---~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-~~~~~~~~~~~~ 338 (430)
.. +-+|||.++ .| +|+|++++++++++.+.. .....++..+.+.+.++.++|+..+ .+...+.++++.
T Consensus 213 ~~~i~~~S~SK~~~~~G-lRiG~i~~~~~~~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 285 (364)
T PRK07865 213 TGLLAVHSLSKQSNLAG-YRAGFVAGDPALVAELLE------VRKHAGMMVPAPVQAAMVAALGDDAHVREQRERYARRR 285 (364)
T ss_pred ceEEEEeechhccCCCc-eeeEEEecCHHHHHHHHH------HHHhcCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 12 337999985 46 899999999998887764 1223345567777776666664211 122334445555
Q ss_pred HHHHHHHHchhcCCCeeeEeecceE-EEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-------CCEEEEeCCCCCC
Q psy14484 339 KKITKALTSLITHPKIINFRQKGMI-WAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-------GNTVYLMPPYILN 410 (430)
Q Consensus 339 ~~l~~~l~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-------~~~lR~~~~~~~t 410 (430)
+.+.+.|++. + +....+.|.+ +++.+. .+ ...+.+.|.++||.+.|+ .+++|++++ .+
T Consensus 286 ~~l~~~L~~~---g-~~~~~~~~~~~~~~~~~-~~-------~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~--~~ 351 (364)
T PRK07865 286 AVLRPALEAA---G-FRVDHSEAGLYLWATRG-ED-------CWDTVAWLAERGILVAPGDFYGPAGAQHVRVALT--AT 351 (364)
T ss_pred HHHHHHHHHc---C-CcccCCCccEEEEEeCC-CC-------HHHHHHHHHHCCEEEeCccccCcCCCCEEEEEec--CC
Confidence 5566665543 2 2222344554 444333 21 246788899999999874 258899765 37
Q ss_pred HHHHHHHHHHHH
Q psy14484 411 KNEIQHMTSAIF 422 (430)
Q Consensus 411 ~e~i~~~~~~l~ 422 (430)
++++++++++|+
T Consensus 352 ~~~~~~~~~~l~ 363 (364)
T PRK07865 352 DERIAAAVERLA 363 (364)
T ss_pred HHHHHHHHHHhh
Confidence 899999999885
No 200
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=5.7e-22 Score=188.27 Aligned_cols=309 Identities=11% Similarity=0.154 Sum_probs=195.0
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVAL 111 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al 111 (430)
.+..++||..| .++++ .+|.+.+++.+.+..... ..|+.....++++.+++.++.++++|++|+|+++++..++
T Consensus 16 ~~~~~i~l~~~--~~~~~-~~~~~~~~~~~~~~~~~~---~~Y~~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~ 89 (337)
T PRK03967 16 EGNYRIWLDKN--ENPFD-LPEELKEEIFEELKRVPF---NRYPHITSDPLREAIAEFYGLDAENIAVGNGSDELISYLV 89 (337)
T ss_pred CCCceEEecCC--CCCCC-CCHHHHHHHHHHhhcCcc---ccCCCCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHH
Confidence 34567888877 45664 568899998887754211 1334444567888888888778899999999999998766
Q ss_pred HHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHH
Q psy14484 112 KMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDL 191 (430)
Q Consensus 112 ~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 191 (430)
+.. +++.|++.+|+|..+...... . ...+..++....+.. |++++
T Consensus 90 ~~~----------~gd~V~v~~P~y~~~~~~~~~-~------------g~~~~~v~~~~~~~~------------d~~~l 134 (337)
T PRK03967 90 KLF----------EGKHIVITPPTFGMYSFYAKL-N------------GIPVIDVPLKEDFTI------------DGERI 134 (337)
T ss_pred HHh----------CCCeEEEeCCChHHHHHHHHH-c------------CCeEEEeecCCCCCc------------CHHHH
Confidence 643 357899999999755332211 1 122233333222222 67777
Q ss_pred HHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCce---ee
Q psy14484 192 EILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDF---LC 268 (430)
Q Consensus 192 e~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~---~~ 268 (430)
++.+ .+++++++.. ++|++|...+ .++|.++++ +++++|+||+|.+|.. .+... .....+++ -+
T Consensus 135 ~~~~----~~~~~v~~~~-P~NPtG~~~~----~~~l~~i~~-~~~~ii~De~y~~~~~-~~~~~--~~~~~~~vi~l~S 201 (337)
T PRK03967 135 AEKA----KNASAVFICS-PNNPTGNLQP----EEEILKVLE-TGKPVVLDEAYAEFSG-KSLIG--LIDEYPNLILLRT 201 (337)
T ss_pred HHhc----cCCCEEEEeC-CCCCCCCCCC----HHHHHHHHh-cCCEEEEECchhhhcc-cchHH--HHhhCCCEEEEec
Confidence 7654 2344555555 7888886665 456666674 6999999999987742 12111 11112333 37
Q ss_pred eecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh-cCHHHHHHHHHHHHHHHHH
Q psy14484 269 LSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK-DNILQRISQDMKKITKALT 346 (430)
Q Consensus 269 ~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~-~~~~~~~~~~~~~l~~~l~ 346 (430)
|||.++ .| +|+|++++++++++.+.. ....++.+.+++.++..+|+..+. .+..+.+.+..+.+.+.|.
T Consensus 202 ~SK~~~l~G-lRiG~iv~~~~~i~~~~~--------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~ 272 (337)
T PRK03967 202 FSKAFGLAG-IRAGYAIANEEIIDALYR--------IKPPFSLNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELG 272 (337)
T ss_pred chHhhcchh-hhheeeecCHHHHHHHHh--------hcCCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999998 67 899999999999888775 223456677777777776652110 1122333344444444444
Q ss_pred chhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC----CEEEEeCCCCCCHHHHHHHHHHHH
Q psy14484 347 SLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG----NTVYLMPPYILNKNEIQHMTSAIF 422 (430)
Q Consensus 347 ~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~----~~lR~~~~~~~t~e~i~~~~~~l~ 422 (430)
+. ..+..|.++++.+ .+.+.|.++||.+.+++ +++|+++. ++++.++++++|+
T Consensus 273 ~~-------~~~~~~~~~~~~~-------------~~~~~l~~~gi~v~~~~~~~~~~~Ri~~~---~~~~~~~l~~~l~ 329 (337)
T PRK03967 273 EY-------AYPSDANFLLLKL-------------DAYDYLLENGIVVRKLSGRLEGHIRVTVG---KREENDEFIKALK 329 (337)
T ss_pred cC-------cCCCCCcEEEEhH-------------HHHHHHHHCCEEEEeCCCCCCCeEEEecC---CHHHHHHHHHHHH
Confidence 32 1234455544322 26788889999997652 58999866 6778888888887
Q ss_pred HHHH
Q psy14484 423 QTFN 426 (430)
Q Consensus 423 ~~l~ 426 (430)
++..
T Consensus 330 ~~~~ 333 (337)
T PRK03967 330 EIKE 333 (337)
T ss_pred HHHH
Confidence 7654
No 201
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.91 E-value=1.2e-21 Score=193.20 Aligned_cols=306 Identities=16% Similarity=0.103 Sum_probs=190.1
Q ss_pred CHHHHHHHHHHHhhcC----CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCcc
Q psy14484 76 HKPVIKLSEKLSSLTQ----YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 151 (430)
Q Consensus 76 ~~~~~~l~~~l~~~~~----~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~ 151 (430)
.++.+.+++.+.+.++ .++++|++|+|+++++..++.+++. +++.|++.+|+|.++........+
T Consensus 89 ~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~--------pGd~Vlv~~P~Y~~~~~~~~~~~g--- 157 (468)
T PLN02450 89 PAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAE--------PGDAFLLPTPYYPGFDRDLKWRTG--- 157 (468)
T ss_pred HHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCC--------CCCEEEECCCCCCchHHHHhhcCC---
Confidence 3566777777765433 4678999999999999999988875 678999999999887443221111
Q ss_pred chhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhC---CCCeEEEEEccccccCCCcccCChHHHHHH
Q psy14484 152 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKN---HNKIAAIIIEPLVQCAGGMIMYDSIYLKLV 228 (430)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l 228 (430)
...+.++........ .|++++++++.+. +.+++++++.. ++|++| ...+.+.+++|
T Consensus 158 ---------~~~v~v~~~~~~~~~----------~~~~~le~~~~~~~~~~~~~k~v~l~n-P~NPTG-~~~s~e~l~~l 216 (468)
T PLN02450 158 ---------VEIVPIHCSSSNGFQ----------ITESALEEAYQQAQKLNLKVKGVLITN-PSNPLG-TTTTRTELNLL 216 (468)
T ss_pred ---------cEEEEEecCCccCCc----------CCHHHHHHHHHHHHhcCCCeeEEEEec-CCCCCC-cccCHHHHHHH
Confidence 122233321111100 1667888777642 23667666665 778888 66788899999
Q ss_pred HHHHHhcCCEEEEeccccCCCCcccccc--cccC------C--CCCc---eeeeecccC-CCccccEEEEEcHH-HHHhh
Q psy14484 229 REICNNYNIHLIADEIAVGCGRTGKFFA--CEHA------E--IWPD---FLCLSKGIT-GGYLPLSLVMTTDK-IYNSI 293 (430)
Q Consensus 229 ~~l~~~~gi~li~DEv~~g~g~~g~~~~--~~~~------~--~~~d---~~~~sK~l~-gG~~~ig~~~~~~~-~~~~~ 293 (430)
.++|++|++++|+||+|.++.+.+..+. .... + .... +-+|||.++ .| +|+|+++++++ +.+.+
T Consensus 217 l~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~G-lRiG~li~~~~~l~~~~ 295 (468)
T PLN02450 217 VDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPG-FRVGAIYSNDEMVVSAA 295 (468)
T ss_pred HHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCC-ccEEEEEECCHHHHHHH
Confidence 9999999999999999997654442211 1111 0 1112 347999997 57 89999999754 45554
Q ss_pred hccCCcccccccCCCCCCHHHHHHHHHHHHHHh-----hcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeec-ceEEEEE
Q psy14484 294 YYKNNINIFLHSHSYSGNPLACCAALATLEIFN-----KDNILQRISQDMKKITKALTSLITHPKIINFRQK-GMIWAFD 367 (430)
Q Consensus 294 ~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-----~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~-g~~~~~~ 367 (430)
.. .......+.+++.++.++|+.-. -+...+++++..+.+.+.|+++ . +...++. |.++++.
T Consensus 296 ~~--------~~~~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~---g-i~~~~~~~g~flwi~ 363 (468)
T PLN02450 296 TK--------MSSFGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA---G-IKCLKSNAGLFCWVD 363 (468)
T ss_pred HH--------HhhcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc---C-CcccCCCceEEEEEE
Confidence 43 11112346677777766664210 0112344444555555555443 2 2233444 4466666
Q ss_pred EeecCCccc-hhHHHHHHHHHH-HCCcEEeec-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 368 VIIEDPEQI-ETFSKKFFVAAL-KNELLLRPI-------GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 368 ~~~~~~~~~-~~~a~~~~~~l~-~~Gv~~~~~-------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+. ...... .....++.+.|+ +.||.+.|+ .+++|++++. .+++++++++++|++++.+.
T Consensus 364 l~-~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~-~~~~~l~~~l~ri~~~l~~~ 431 (468)
T PLN02450 364 MR-HLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFAN-MSEETLDLAMKRLKSFVESD 431 (468)
T ss_pred ch-HhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecC-CCHHHHHHHHHHHHHHHHhc
Confidence 64 321111 011235667765 479999986 2588986553 57899999999999988754
No 202
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.91 E-value=1.7e-21 Score=191.15 Aligned_cols=342 Identities=11% Similarity=0.044 Sum_probs=216.0
Q ss_pred CCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccC--CC----CCHHHHHHHHHHHhhcCCC-CCeEEEcCCchH
Q psy14484 33 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLS--NL----THKPVIKLSEKLSSLTQYK-LGHCFYGSDGAS 105 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~--~~----~~~~~~~l~~~l~~~~~~~-~~~v~~~~sgte 105 (430)
+..|+|..+ .|..++.|.+++.+.+.+....... .+ ..+..+++++.++++++.. +++|+|++|+++
T Consensus 32 ~~iyLd~a~------~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 105 (424)
T PLN02855 32 KLVYLDNAA------TSQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATE 105 (424)
T ss_pred CeEEeeCcc------ccCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHH
Confidence 357888643 2445788999998887654221111 11 1133568888999999864 479999999999
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHH
Q psy14484 106 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 185 (430)
Q Consensus 106 A~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (430)
++..+++...... ..+++.|++.++.|++........ ......++..++.+.....
T Consensus 106 al~~i~~~~~~~~----~~~gd~vl~~~~~~~s~~~~~~~~---------a~~~g~~v~~v~~~~~~~~----------- 161 (424)
T PLN02855 106 AINLVAYTWGLAN----LKPGDEVILSVAEHHSNIVPWQLV---------AQKTGAVLKFVGLTPDEVL----------- 161 (424)
T ss_pred HHHHHHHHhhhhc----CCCcCEEEECCCccHHHHHHHHHH---------HHHcCCEEEEEecCCCCCc-----------
Confidence 9998887531100 014567888777665432111110 0111223344444322111
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCc
Q psy14484 186 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 265 (430)
Q Consensus 186 ~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d 265 (430)
|++++++.++ +++++|++.. +++++|.+.| +++|.++|+++|+++|+|++|. ++.. . ++.....+|
T Consensus 162 -~~~~l~~~i~---~~t~lv~i~~-~~n~tG~~~~----~~~I~~l~~~~g~~vivD~a~~-~g~~--~--~~~~~~~~d 227 (424)
T PLN02855 162 -DVEQLKELLS---EKTKLVATHH-VSNVLGSILP----VEDIVHWAHAVGAKVLVDACQS-VPHM--P--VDVQTLGAD 227 (424)
T ss_pred -CHHHHHHHhc---cCceEEEEeC-ccccccccCC----HHHHHHHHHHcCCEEEEEhhhh-cCCc--C--CCchhcCCC
Confidence 7889998885 4788888888 9999998888 9999999999999999999996 4322 1 222233468
Q ss_pred eee--eecccCCCccccEEEEEcHHHHHhhhcc--CCcc---cc---------cccCCC-CCCHHHHHHHHHHHHHHhh-
Q psy14484 266 FLC--LSKGITGGYLPLSLVMTTDKIYNSIYYK--NNIN---IF---------LHSHSY-SGNPLACCAALATLEIFNK- 327 (430)
Q Consensus 266 ~~~--~sK~l~gG~~~ig~~~~~~~~~~~~~~~--~~~~---~~---------~~~~t~-~~~~~~~~aa~~~l~~~~~- 327 (430)
+++ +.|. .|. ..+|++++++++.+.+.+- +... .+ ...... +.+..+.++..++++.+.+
T Consensus 228 ~~~~s~~K~-~gp-~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~ 305 (424)
T PLN02855 228 FLVASSHKM-CGP-TGIGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEI 305 (424)
T ss_pred EEEeecccc-cCC-CccEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHh
Confidence 774 5694 332 3589999999887665421 0000 00 000011 2344555566667776544
Q ss_pred --cCHHHHHHHHHHHHHHHHHchhcCCCeee----EeecceEEEEEEeecCCccchhHHHHHHHHHHHC-CcEEeec---
Q psy14484 328 --DNILQRISQDMKKITKALTSLITHPKIIN----FRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKN-ELLLRPI--- 397 (430)
Q Consensus 328 --~~~~~~~~~~~~~l~~~l~~l~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~-Gv~~~~~--- 397 (430)
++..++.+++.+++++.|+++.....+.. ...++.++.+.+. .. . ...+.+.|.++ ||.++.+
T Consensus 306 g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~-~~----~--~~~v~~~L~~~~gI~v~~g~~c 378 (424)
T PLN02855 306 GMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVE-GI----H--PTDLSTFLDQQHGVAIRSGHHC 378 (424)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEEC-Cc----C--HHHHHHHhcccCCEEEechhhh
Confidence 34556777788888888766522222211 1123456667665 21 1 35688888887 9988753
Q ss_pred ----------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 398 ----------GNTVYLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 398 ----------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
.+++|+++++++|++|++++++.|++++..
T Consensus 379 ~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~ 418 (424)
T PLN02855 379 AQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDTIAF 418 (424)
T ss_pred hHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHHH
Confidence 257999999999999999999999998865
No 203
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=2.3e-22 Score=192.44 Aligned_cols=310 Identities=12% Similarity=0.125 Sum_probs=197.5
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKM 113 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~ 113 (430)
...+|+..| .+++|-. +.+ ..... ..|+.....+|++.+++.+++++++|++|+|+++++..++++
T Consensus 31 ~~~~~l~~n--e~~~~~~-~~~------~~~~~-----~~Yp~~~~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~ 96 (354)
T PRK04635 31 RGDIWINAN--ESPFNNE-YKL------DLARL-----NRYPECQPPELINAYSAYAGVAPEQILTSRGADEAIELLIRA 96 (354)
T ss_pred CCcEEeeCC--CCCCCCC-hhh------hhHHh-----ccCCCCCHHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHH
Confidence 455787776 5666632 222 11111 134444457888888888888999999999999999999987
Q ss_pred HHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHH
Q psy14484 114 SFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEI 193 (430)
Q Consensus 114 ~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~ 193 (430)
... ++++.|++..|+|..+...+... ..++..++.+..+.. |++.+++
T Consensus 97 ~~~-------~g~d~vlv~~P~y~~y~~~~~~~-------------g~~v~~v~~~~~~~~------------~~~~l~~ 144 (354)
T PRK04635 97 FCE-------PGQDSIACFGPTYGMYAISAETF-------------NVGVKALPLTADYQL------------PLDYIEQ 144 (354)
T ss_pred hcC-------CCCCeEEEcCCChHHHHHHHHHc-------------CCEEEEEecCCCCCC------------CHHHHHh
Confidence 764 24478999999998654332221 123334444322222 5666652
Q ss_pred HHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCc---eeeee
Q psy14484 194 LLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD---FLCLS 270 (430)
Q Consensus 194 ~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d---~~~~s 270 (430)
+ ++++++++.. ++|++|.+. +.+.+++|.+.|+ ++++|+||+|..|...... .+.....++ +-+||
T Consensus 145 -~----~~~~li~i~n-P~NPTG~~~-~~~~l~~l~~~~~--~~~vivDeay~~~~~~~s~--~~~~~~~~~~iv~~S~S 213 (354)
T PRK04635 145 -L----DGAKLVFICN-PNNPTGTVI-DRADIEQLIEMTP--DAIVVVDEAYIEFCPEYSV--ADLLASYPNLVVLRTLS 213 (354)
T ss_pred -c----cCCCEEEEeC-CCCCCCccC-CHHHHHHHHHhCC--CcEEEEeCchHhhccCcch--HHHHhhCCCEEEEechH
Confidence 3 2566666767 889999655 5555666666655 4999999999877422111 111111233 33799
Q ss_pred cccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHHH
Q psy14484 271 KGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK---DNILQRISQDMKKITKALT 346 (430)
Q Consensus 271 K~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~l~~~l~ 346 (430)
|.++ .| +|+|++++++++++.+.. ....++.+.+.+.++.++|+.... ....+.+++..+++.+.|+
T Consensus 214 K~~~l~G-lRlG~~i~~~~~~~~l~~--------~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~ 284 (354)
T PRK04635 214 KAFALAG-ARCGFTLANEELIEILMR--------VIAPYPVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALS 284 (354)
T ss_pred HHhhhhH-HHHhhhhCCHHHHHHHHh--------hcCCCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9987 46 899999999999887765 223455566666666666642101 1223344555566666665
Q ss_pred chhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-----CCEEEEeCCCCCCHHHHHHHHHHH
Q psy14484 347 SLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----GNTVYLMPPYILNKNEIQHMTSAI 421 (430)
Q Consensus 347 ~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-----~~~lR~~~~~~~t~e~i~~~~~~l 421 (430)
++ +.+...++.|.++++.+. + +.++.+.|.++||.+..+ ++++|++++ +++++++++++|
T Consensus 285 ~~---~~~~~~~~~g~f~~~~~~-~--------~~~~~~~l~~~gv~v~~~~~~~~~~~lRis~~---~~e~~~~l~~al 349 (354)
T PRK04635 285 MY---GGAKVLEGNGNYVLAKFD-D--------VDAVFKALWDAGIVARAYKDPRLANCIRFSFS---NRAETDKLIGLI 349 (354)
T ss_pred hC---CCceECCCCCcEEEEECC-C--------HHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC---CHHHHHHHHHHH
Confidence 54 322333456777776654 2 256888899999999764 368999854 899999999999
Q ss_pred HHH
Q psy14484 422 FQT 424 (430)
Q Consensus 422 ~~~ 424 (430)
++-
T Consensus 350 ~~~ 352 (354)
T PRK04635 350 RNQ 352 (354)
T ss_pred HHh
Confidence 763
No 204
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.91 E-value=3.8e-21 Score=185.78 Aligned_cols=325 Identities=11% Similarity=0.070 Sum_probs=208.6
Q ss_pred CCCCCHHHHHHHHHHHhhccccccCCCC-------CHHHHHHHHHHHhhcCCC-CCeEEEcCCchHHHHHHHHHHHHhhh
Q psy14484 48 FGHSNSYINKALKNQLNKLEHVMLSNLT-------HKPVIKLSEKLSSLTQYK-LGHCFYGSDGASAVEVALKMSFHYWY 119 (430)
Q Consensus 48 lG~~~p~v~~a~~~~~~~~~~~~~~~~~-------~~~~~~l~~~l~~~~~~~-~~~v~~~~sgteA~~~al~~~~~~~~ 119 (430)
.|..+|.+.+++.+.+....... ..+. .....++++.+++.++.. .+++++++|+++|++.+++.+....
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~- 85 (373)
T cd06453 8 TSQKPQPVIDAIVDYYRHYNANV-HRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRAN- 85 (373)
T ss_pred ccCCCHHHHHHHHHHHHhcCCCC-CCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcC-
Confidence 45567899999988875542211 1111 134567888899998766 6799999999999999998776410
Q ss_pred hcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCC
Q psy14484 120 NKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNH 199 (430)
Q Consensus 120 ~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~ 199 (430)
.++++|++.++.|.+......... .....++..++.+..... |++++++.+.
T Consensus 86 ----~~g~~vl~~~~~~~~~~~~~~~~~---------~~~g~~~~~v~~~~~~~~------------d~~~l~~~l~--- 137 (373)
T cd06453 86 ----KPGDEIVTSVMEHHSNIVPWQQLA---------ERTGAKLKVVPVDDDGQL------------DLEALEKLLT--- 137 (373)
T ss_pred ----CCCCEEEECcchhHHHHHHHHHHH---------hhcCcEEEEeecCCCCCc------------CHHHHHHHhc---
Confidence 034678887766654311100000 011123344544422222 7899999885
Q ss_pred CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeee--cccCCCc
Q psy14484 200 NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITGGY 277 (430)
Q Consensus 200 ~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s--K~l~gG~ 277 (430)
+++++|++.. +++++|...+ +++|.++|+++|+++|+|++++ ++.. ........+|++++| |.+++
T Consensus 138 ~~~~~v~~~~-~~~~tG~~~~----~~~i~~~~~~~~~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~~~-- 205 (373)
T cd06453 138 ERTKLVAVTH-VSNVLGTINP----VKEIGEIAHEAGVPVLVDGAQS-AGHM----PVDVQDLGCDFLAFSGHKMLGP-- 205 (373)
T ss_pred CCceEEEEeC-cccccCCcCC----HHHHHHHHHHcCCEEEEEhhhh-cCce----eeeccccCCCEEEeccccccCC--
Confidence 4678888888 8888998877 8999999999999999999986 3322 112223457999888 98876
Q ss_pred cccEEEEEcHHHHHhhhccCCcc----c-------cc----ccCCCCCCHHHHHHHHHHHHHHhhcC---HHHHHHHHHH
Q psy14484 278 LPLSLVMTTDKIYNSIYYKNNIN----I-------FL----HSHSYSGNPLACCAALATLEIFNKDN---ILQRISQDMK 339 (430)
Q Consensus 278 ~~ig~~~~~~~~~~~~~~~~~~~----~-------~~----~~~t~~~~~~~~~aa~~~l~~~~~~~---~~~~~~~~~~ 339 (430)
.++|++++++++.+.+.+..... . +. .....+.+..++.+..++++.+.+.+ ..++.+++.+
T Consensus 206 ~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~ 285 (373)
T cd06453 206 TGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTA 285 (373)
T ss_pred CCcEEEEEchHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 46899999998877665410000 0 00 00011234445555566677665543 3455666777
Q ss_pred HHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-------------CCEEEEeCC
Q psy14484 340 KITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-------------GNTVYLMPP 406 (430)
Q Consensus 340 ~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-------------~~~lR~~~~ 406 (430)
++.+.|+++.....+......+.++.+.+. .. . +.++.+.|.++||.+.++ ++.+|++++
T Consensus 286 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~---~---~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~ 358 (373)
T cd06453 286 YALERLSEIPGVRVYGDAEDRAGVVSFNLE-GI---H---PHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFG 358 (373)
T ss_pred HHHHHHhcCCCeEEeCCccccCCeEEEEEC-Cc---C---HHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEec
Confidence 777777655222112122234667777665 31 1 357889999999988642 368999999
Q ss_pred CCCCHHHHHHHHHHH
Q psy14484 407 YILNKNEIQHMTSAI 421 (430)
Q Consensus 407 ~~~t~e~i~~~~~~l 421 (430)
..+|++|+++++++|
T Consensus 359 ~~~t~~di~~~~~~l 373 (373)
T cd06453 359 LYNTEEEIDALVEAL 373 (373)
T ss_pred CCCCHHHHHHHHhhC
Confidence 999999999999864
No 205
>PRK02948 cysteine desulfurase; Provisional
Probab=99.91 E-value=2.4e-21 Score=187.65 Aligned_cols=336 Identities=13% Similarity=0.048 Sum_probs=211.5
Q ss_pred EEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCC-----CCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHH
Q psy14484 35 RYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNL-----THKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEV 109 (430)
Q Consensus 35 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~-----~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~ 109 (430)
.|+|..+ .|..++.+.+++.+.+........... .....+++++.+++.++.++++|++++|+++++..
T Consensus 2 ~yld~a~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~ 75 (381)
T PRK02948 2 IYLDYAA------TTPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYL 75 (381)
T ss_pred EeccCCC------CCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHH
Confidence 3666443 345688999999888765321111111 12456788899999998788899999999999999
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHH
Q psy14484 110 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIF 189 (430)
Q Consensus 110 al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 189 (430)
++..+.... ..+++.|++ +...|.......... .....++..++.+..... |++
T Consensus 76 ~~~~~~~~~----~~~g~~vv~-~~~~h~s~~~~~~~~---------~~~g~~v~~v~~~~~~~~------------d~~ 129 (381)
T PRK02948 76 AIQSLLNAL----PQNKKHIIT-TPMEHASIHSYFQSL---------ESQGYTVTEIPVDKSGLI------------RLV 129 (381)
T ss_pred HHHHHHHhc----cCCCCEEEE-CCcccHHHHHHHHHH---------HhCCCEEEEEeeCCCCCC------------CHH
Confidence 988775421 013455555 444444322211100 111223334443322222 789
Q ss_pred HHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCcee--
Q psy14484 190 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL-- 267 (430)
Q Consensus 190 ~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~-- 267 (430)
+|++.++ +++.+|+++. +++++|.+.+ +++|.++|+++|+++|+|++++ ++..+ .....+ ..|++
T Consensus 130 ~l~~~l~---~~~~lv~~~~-~~n~tG~~~~----~~~I~~l~~~~~~~vivD~~~~-~g~~~--~~~~~~--~~d~~~~ 196 (381)
T PRK02948 130 DLERAIT---PDTVLASIQH-ANSEIGTIQP----IAEIGALLKKYNVLFHSDCVQT-FGKLP--IDVFEM--GIDSLSV 196 (381)
T ss_pred HHHHhcC---CCCEEEEEEC-CcCCcEeehh----HHHHHHHHHHcCCEEEEEChhh-ccccc--cCcccC--CCCEEEe
Confidence 9998885 4678888888 9999998888 9999999999999999998876 65432 222223 35666
Q ss_pred eeecccCCCccccEEEEEcHHH-HHhhhccC-CcccccccCCCCCCHHHHHHHHHHHHHHh--hcCHHHHHHHHHHHHHH
Q psy14484 268 CLSKGITGGYLPLSLVMTTDKI-YNSIYYKN-NINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQDMKKITK 343 (430)
Q Consensus 268 ~~sK~l~gG~~~ig~~~~~~~~-~~~~~~~~-~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~~~~l~~ 343 (430)
+++|.++. ..+|++++++++ +..+...+ ..+. ...++.+.++.+++.++++.+. .++..++++++.+++++
T Consensus 197 s~~K~~gp--~G~G~l~~~~~~~~~~~~~~~~~~~~---~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~ 271 (381)
T PRK02948 197 SAHKIYGP--KGVGAVYINPQVRWKPVFPGTTHEKG---FRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLE 271 (381)
T ss_pred cHHhcCCC--CcEEEEEEcCCCCCCCcccCCCCCCC---cCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56697653 247889888765 11111100 0001 1233557777888888887542 24556778888888888
Q ss_pred HHHchhcCCCeeeE---eecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-----------------------
Q psy14484 344 ALTSLITHPKIINF---RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI----------------------- 397 (430)
Q Consensus 344 ~l~~l~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~----------------------- 397 (430)
.|+++ ........ .....++.+... . . . ..++...|.++||.++.+
T Consensus 272 ~L~~~-~~~v~~~~~~~~~~~~i~~~~~~-~-~---~--~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~ 343 (381)
T PRK02948 272 QIQTL-PLPIEVEGHSTSCLPHIIGVTIK-G-I---E--GQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEE 343 (381)
T ss_pred HHhcC-CCCEEEeCCCccCcCCEEEEEeC-C-C---C--HHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHH
Confidence 88776 22211110 011223333333 2 1 1 245777788899999842
Q ss_pred -CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 398 -GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 398 -~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.+++|++++..+|++|++++++.|++++.++
T Consensus 344 ~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 375 (381)
T PRK02948 344 AKQFVRFSFGQQTTKDQIDTTIHALETIGNQF 375 (381)
T ss_pred hCceEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2579999999999999999999999988764
No 206
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.90 E-value=8.8e-21 Score=185.09 Aligned_cols=342 Identities=11% Similarity=0.049 Sum_probs=216.8
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCC------CCHHHHHHHHHHHhhcCCC-CCeEEEcCCchHH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNL------THKPVIKLSEKLSSLTQYK-LGHCFYGSDGASA 106 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~------~~~~~~~l~~~l~~~~~~~-~~~v~~~~sgteA 106 (430)
..|+|..+ .|..++.+.+++.+.+.........+. .....+++++.++++++.. ++++++++|++++
T Consensus 19 ~~yld~~~------~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~ 92 (403)
T TIGR01979 19 LVYLDSAA------TSQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTES 92 (403)
T ss_pred eEEEeCcc------ccCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHH
Confidence 46888543 444578899999887754321111011 1134568888999999866 6799999999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 186 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (430)
+..++..+.... ..+++.|++.++.|+........ .......+...++.+.+...
T Consensus 93 l~~~~~~~~~~~----~~~g~~vl~~~~~~~s~~~~~~~---------~~~~~g~~~~~v~~~~~~~~------------ 147 (403)
T TIGR01979 93 INLVAYSWGDSN----LKAGDEIVISEMEHHANIVPWQL---------LAERTGATLKFIPLDDDGTL------------ 147 (403)
T ss_pred HHHHHHHhhhhc----CCCCCEEEECcchhhHHHHHHHH---------HHHhcCcEEEEEecCCCCCC------------
Confidence 998887653210 01456788777766643211111 00011223345544432222
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCce
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDF 266 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~ 266 (430)
|++++++.+. ++++++++.. +++++|...+ +++|.++|+++|+++|+|++|+ ++.. ..... ...+|+
T Consensus 148 ~~~~l~~~i~---~~~~lv~~~~-~~~~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~g~~--~~~~~--~~~~d~ 214 (403)
T TIGR01979 148 DLDDLEKLLT---EKTKLVAITH-VSNVLGTVNP----VEEIAKLAHQVGAKVLVDGAQA-VPHM--PVDVQ--ALDCDF 214 (403)
T ss_pred CHHHHHHHhc---cCCeEEEEEc-ccccccccCC----HHHHHHHHHHcCCEEEEEchhh-cCcc--ccCcc--ccCCCE
Confidence 7889988885 5688888888 8999998888 9999999999999999999986 4321 12222 334677
Q ss_pred ee--eecccCCCccccEEEEEcHHHHHhhhcc--CC-c-ccc------c----c-cCCCCCCHHHHHHHHHHHHHHhh--
Q psy14484 267 LC--LSKGITGGYLPLSLVMTTDKIYNSIYYK--NN-I-NIF------L----H-SHSYSGNPLACCAALATLEIFNK-- 327 (430)
Q Consensus 267 ~~--~sK~l~gG~~~ig~~~~~~~~~~~~~~~--~~-~-~~~------~----~-~~t~~~~~~~~~aa~~~l~~~~~-- 327 (430)
++ ++|.++. ..+|++++++++.+.+.+. +. . ... . . ...-+.+..++++..++++.+.+
T Consensus 215 ~~~s~~K~~gp--~G~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g 292 (403)
T TIGR01979 215 YVFSGHKMYGP--TGIGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIG 292 (403)
T ss_pred EEEecccccCC--CCceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhC
Confidence 65 5596643 3589999998877665420 00 0 000 0 0 00012345556666677776643
Q ss_pred -cCHHHHHHHHHHHHHHHHHchhcCCCeeeE--eecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-------
Q psy14484 328 -DNILQRISQDMKKITKALTSLITHPKIINF--RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI------- 397 (430)
Q Consensus 328 -~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~------- 397 (430)
+...++..++.+++.+.|+++.....+... ..++.++.+.+. .. . ..++.+.|.++||.+.++
T Consensus 293 ~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~-~~----~--~~~~~~~L~~~gI~v~~g~~~~~~~ 365 (403)
T TIGR01979 293 LENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVE-GV----H--PHDVGTILDEEGIAVRSGHHCAQPL 365 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeC-Cc----C--HHHHHHHHhhCCEEEcchhhhhHHH
Confidence 345677777888888877765222111111 123667777765 31 1 246788899999988752
Q ss_pred ------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 398 ------GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 398 ------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
++++||+++..+|++|+++++++|+++++.+
T Consensus 366 ~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 366 MRRFGVPATCRASFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred HHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence 3689999999999999999999999877653
No 207
>PLN02672 methionine S-methyltransferase
Probab=99.90 E-value=2.1e-21 Score=201.86 Aligned_cols=345 Identities=13% Similarity=0.077 Sum_probs=221.7
Q ss_pred EEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCC---eEEEcCCc
Q psy14484 27 SLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLG---HCFYGSDG 103 (430)
Q Consensus 27 ~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~---~v~~~~sg 103 (430)
++.+.+|..++++..| .+.++ .+|.+++++.+.+..... .....+...++++++++.++...+ +|++++|+
T Consensus 690 ~~~~~~g~~vI~Lsin--E~d~p-pPp~V~eAi~eal~~~~~---s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs 763 (1082)
T PLN02672 690 SVSGSQESSLIHMDVD--ESFLP-VPSAVKASIFESFVRQNI---SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTS 763 (1082)
T ss_pred CCcccCCCCEEEEeCC--CCCCC-CCHHHHHHHHHHHhhcCC---CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCH
Confidence 3566678889998877 56666 688999999987755322 122345678999999988766554 79999999
Q ss_pred hHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC--CCCCCCCCChh
Q psy14484 104 ASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD--SRNINKGNSAN 181 (430)
Q Consensus 104 teA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 181 (430)
++++..+++++.. +++.|++..|+|..+.......+. ....++... .+..
T Consensus 764 ~elL~lll~aLl~--------pGD~VLVp~PtY~~Y~~~a~~~Ga-------------~vv~Vpl~~e~gf~l------- 815 (1082)
T PLN02672 764 LALFNKLVLCCVQ--------EGGTLCFPAGSNGTYVSAAKFLKA-------------NFRRIPTKSSDGFKL------- 815 (1082)
T ss_pred HHHHHHHHHHHcC--------CCCEEEEeCCChHHHHHHHHHcCC-------------EEEEEecccccCCCC-------
Confidence 9999988888775 678999999999887554443222 223333321 1221
Q ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccc---ccc
Q psy14484 182 EIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF---ACE 258 (430)
Q Consensus 182 ~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~---~~~ 258 (430)
|+++|+++++.. .+..+++++| .+|++| ..++.+.+++|.++|++||+++|+||+|.++.+.+... .+.
T Consensus 816 -----D~d~Le~al~~~-~~~~I~L~nP-nhNPTG-~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~ 887 (1082)
T PLN02672 816 -----TAKTLASTLETV-KKPWVYISGP-TINPTG-LLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLK 887 (1082)
T ss_pred -----CHHHHHHHhccC-CCCEEEEECc-CCCCcC-ccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchh
Confidence 778899888631 2346778888 668888 67788999999999999999999999999776554321 110
Q ss_pred ----cC-CCCC--ce---eeeecccCCCccccEEEEEcH-HHHHhhhccCCccccc-ccCCCCCCHHHHHHHHHHHHHHh
Q psy14484 259 ----HA-EIWP--DF---LCLSKGITGGYLPLSLVMTTD-KIYNSIYYKNNINIFL-HSHSYSGNPLACCAALATLEIFN 326 (430)
Q Consensus 259 ----~~-~~~~--d~---~~~sK~l~gG~~~ig~~~~~~-~~~~~~~~~~~~~~~~-~~~t~~~~~~~~~aa~~~l~~~~ 326 (430)
.. ...+ .+ -+|||.++.+++|+|++++++ ++++.+.. .. ....+..+..++.++.+++.. +
T Consensus 888 s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi~~l~~------~~~~s~~~~~~q~Aaaaalall~~-~ 960 (1082)
T PLN02672 888 SILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVLIDAFHS------APGLSRPHSTLKYTIKKLLGLKNQ-K 960 (1082)
T ss_pred hHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHHHHHHHH------hhhhcCCCcHHHHHHHHHHHHHhc-c
Confidence 11 1111 22 268987765338999999964 47777764 10 111122223333333332210 1
Q ss_pred hc-------CHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCC-------ccc------hhHHHHHHHH
Q psy14484 327 KD-------NILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDP-------EQI------ETFSKKFFVA 386 (430)
Q Consensus 327 ~~-------~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~-------~~~------~~~a~~~~~~ 386 (430)
.. +..+.++++.+++.+.|++. ++...++.|.|+.|... ... ... .-.+..+++.
T Consensus 961 ~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~----Gi~v~~PeGGFfLwl~l-~~~l~~~~~~~~~~~~~~~~lds~efae~ 1035 (1082)
T PLN02672 961 SSDLLDGVAEQKKILKSRAERLKETLEAC----GWDVLEPQGGISMVAKP-SAYLGKTVKLKSIDGDTGIKLDSSNIREA 1035 (1082)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHC----CCeEecCCcEEEEEEEc-cccccccccccccccccccCCCHHHHHHH
Confidence 12 22334555566666666543 23345667777666432 100 000 0014679999
Q ss_pred HHHC-CcEEeec-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 387 ALKN-ELLLRPI-----GNTVYLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 387 l~~~-Gv~~~~~-----~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
|+++ ||.+.|+ .+++||++. .+++++++++++|++.++-
T Consensus 1036 LLee~GVaV~PGs~FG~~g~~RIsfa--~~~e~LeeALerL~kf~~~ 1080 (1082)
T PLN02672 1036 ILKSTGLCINSSSWTGIPGYCRFSFA--LEDSEFDRALKAIARFKEL 1080 (1082)
T ss_pred HHHcCCEEEecCcccCCCCeEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 8876 9999985 268888655 5888999999999986653
No 208
>PRK09265 aminotransferase AlaT; Validated
Probab=99.90 E-value=2.8e-21 Score=188.32 Aligned_cols=344 Identities=14% Similarity=0.111 Sum_probs=208.7
Q ss_pred CCCEEEecccccccccCCC-CCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhc--CCCCCeEEEcCCchHHHH
Q psy14484 32 SGKRYLDAISSWWVNLFGH-SNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLT--QYKLGHCFYGSDGASAVE 108 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~v~~~~sgteA~~ 108 (430)
.|..++||..|.. .++++ .+|++.+++.+.+.....+....+..++++.+++.+.... +.++++|++++|+++++.
T Consensus 31 ~~~~~i~l~~g~p-~~~~~~~~~~i~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~ 109 (404)
T PRK09265 31 EGHKILKLNIGNP-APFGFEAPDEILRDVIRNLPTAQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELIV 109 (404)
T ss_pred cCCCeEEecCCCC-CcCCCCCCHHHHHHHHHHhhcCCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHHHH
Confidence 5678899887643 34565 4678888888766543222222222344455555543221 467889999999999999
Q ss_pred HHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC--CCCCCCCCChhHHHHH
Q psy14484 109 VALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD--SRNINKGNSANEIARC 186 (430)
Q Consensus 109 ~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 186 (430)
.+++.+.. +++.|++.+++|..+......... ....++.+. .+..
T Consensus 110 ~~~~~~~~--------~gd~Vlv~~p~y~~~~~~~~~~g~-------------~~v~~~~~~~~~~~~------------ 156 (404)
T PRK09265 110 MAMQALLN--------NGDEVLVPAPDYPLWTAAVSLSGG-------------KPVHYLCDEEAGWFP------------ 156 (404)
T ss_pred HHHHHhCC--------CCCEEEEeCCCCcChHHHHHHcCC-------------EEEEEecccccCCCC------------
Confidence 99887754 567899999999876443332221 112222211 1111
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccc-ccccCCCCCc
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-ACEHAEIWPD 265 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~-~~~~~~~~~d 265 (430)
|++++++.+. ++++++++.. ++|++| ...+.+.+++|.++|+++|+++|+||+|.++...+... ......-...
T Consensus 157 d~~~l~~~~~---~~~~~v~l~~-P~NPtG-~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 231 (404)
T PRK09265 157 DLDDIRSKIT---PRTKAIVIIN-PNNPTG-AVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLL 231 (404)
T ss_pred CHHHHHHhcc---ccceEEEEEC-CCCCCC-cCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCce
Confidence 7788888875 3566666555 677888 55667889999999999999999999998775443211 1111110111
Q ss_pred ---eeeeecccCC-CccccEEEEE--cHHH----HHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh-cCHH---
Q psy14484 266 ---FLCLSKGITG-GYLPLSLVMT--TDKI----YNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK-DNIL--- 331 (430)
Q Consensus 266 ---~~~~sK~l~g-G~~~ig~~~~--~~~~----~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~-~~~~--- 331 (430)
+-+|||.++. | +|+|++++ ++.+ .+.+.. ....+++.+.+++.++.++|...+. ..+.
T Consensus 232 vi~~~S~SK~~~~pG-lRiG~~v~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 303 (404)
T PRK09265 232 CVTFNGLSKAYRVAG-FRVGWMVLSGPKKHAKGYIEGLDM-------LASMRLCANVPAQHAIQTALGGYQSINELILPG 303 (404)
T ss_pred EEEEecchhhccCcc-cceEEEEEeCchHHHHHHHHHHHH-------HhccccCCCcHHHHHHHHHhcCchhHHHHHHHH
Confidence 2368999954 6 89999996 3433 222221 1123455677777777777642110 1121
Q ss_pred HHHHHHHHHHHHHHHchhcCCCeeeEeec-ceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-------CCEEEE
Q psy14484 332 QRISQDMKKITKALTSLITHPKIINFRQK-GMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-------GNTVYL 403 (430)
Q Consensus 332 ~~~~~~~~~l~~~l~~l~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-------~~~lR~ 403 (430)
+++.+..+.+.+.|+++ +.+....+. |.++++.+. ............+.+.+.++||.+.|+ .+++|+
T Consensus 304 ~~~~~~r~~~~~~L~~~---~~~~~~~p~~g~~l~~~~~-~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri 379 (404)
T PRK09265 304 GRLYEQRDRAWELLNAI---PGVSCVKPKGALYAFPKLD-PKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRI 379 (404)
T ss_pred HHHHHHHHHHHHHHhcC---CCCcccCCCcceEEEEEec-ccccCCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEE
Confidence 23444455555555543 333334444 555555665 321000111245677788999999875 258898
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 404 MPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 404 ~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
++ ..+++++++++++|++++...
T Consensus 380 ~~--~~~~e~l~~~l~rl~~~l~~~ 402 (404)
T PRK09265 380 VT--LPRVDDLEEAIGRIGRFLSGY 402 (404)
T ss_pred Ee--CCCHHHHHHHHHHHHHHHHHh
Confidence 76 468999999999999988753
No 209
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.90 E-value=3.5e-21 Score=187.51 Aligned_cols=343 Identities=14% Similarity=0.050 Sum_probs=207.4
Q ss_pred CCCEEEecccccccc-cCCCCCHHHHHHHHHHHhhccc--cccCCCCCHHHHHHHHHHHhhcC--CCCCeEEEcCCchHH
Q psy14484 32 SGKRYLDAISSWWVN-LFGHSNSYINKALKNQLNKLEH--VMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASA 106 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~-~lG~~~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgteA 106 (430)
.|..++|+..|.... +.=..++++.+++.+.+..... +....+..+.++.+++.+....+ ..++++++|+|+++|
T Consensus 29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~a 108 (403)
T TIGR01265 29 PEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQA 108 (403)
T ss_pred cCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHH
Confidence 467889988774321 1112468899999887754221 11111222334444444443222 246789999999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC--CCCCCCCCChhHHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD--SRNINKGNSANEIA 184 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 184 (430)
+..+++++.. +++.|++..++|..+....... ..+...++.+. .+..
T Consensus 109 l~~~~~~l~~--------~gd~Vlv~~p~y~~~~~~~~~~-------------g~~~~~~~~~~~~~~~~---------- 157 (403)
T TIGR01265 109 IEICIEALAN--------PGANILVPRPGFPLYDTRAAFS-------------GLEVRLYDLLPEKDWEI---------- 157 (403)
T ss_pred HHHHHHHhCC--------CCCEEEEeCCCchhHHHHHHHc-------------CCEEEEecCCcccCCcc----------
Confidence 9999998764 5678999999987653322211 12223333321 1111
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccc-ccccCCCC
Q psy14484 185 RCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-ACEHAEIW 263 (430)
Q Consensus 185 ~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~-~~~~~~~~ 263 (430)
|++++++.+. ++++++++.. ++|++| ...+.+.+++|.++|+++|+++|+||+|..+...+..+ ....+.-.
T Consensus 158 --d~~~l~~~~~---~~~~~v~i~~-p~NPtG-~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 230 (403)
T TIGR01265 158 --DLDGLEALAD---EKTVAIVVIN-PSNPCG-SVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASI 230 (403)
T ss_pred --CHHHHHHHhC---cCccEEEEec-CCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccC
Confidence 7888888875 3466666666 678888 56677779999999999999999999999886554321 11111111
Q ss_pred Cce---eeeecccCC-CccccEEEEEc--HH-----HHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcC---
Q psy14484 264 PDF---LCLSKGITG-GYLPLSLVMTT--DK-----IYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDN--- 329 (430)
Q Consensus 264 ~d~---~~~sK~l~g-G~~~ig~~~~~--~~-----~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~--- 329 (430)
+.+ -+|||.++. | +|+|++++. ++ +.+.+.. ....+++.+.+++.++..+|+. ..+.
T Consensus 231 ~~vi~~~S~SK~~~~pG-lRiG~~v~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~ 301 (403)
T TIGR01265 231 VPVLSLGGISKRWVVPG-WRLGWIIIHDPHGIFRDTVLQGLKN-------LLQRILGPATIVQGALPDILEN-TPQEFFD 301 (403)
T ss_pred CcEEEEeecccccCCCc-ceEEEEEEeCchhhhHHHHHHHHHH-------HhhhhcCCChHHHHHHHHHHHh-ChHHHHH
Confidence 222 379998654 6 899999884 22 3333322 1112345677777777776652 1122
Q ss_pred -HHHHHHHHHHHHHHHHHchhcCCCeeeE-eecceEEEEEEeecCCccchhHHHHHHHHH-HHCCcEEeec-----CCEE
Q psy14484 330 -ILQRISQDMKKITKALTSLITHPKIINF-RQKGMIWAFDVIIEDPEQIETFSKKFFVAA-LKNELLLRPI-----GNTV 401 (430)
Q Consensus 330 -~~~~~~~~~~~l~~~l~~l~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l-~~~Gv~~~~~-----~~~l 401 (430)
..+.+++..+.+.+.|+.. +++... +..|.++++.+. ...........++++.+ .++||.+.|+ .+++
T Consensus 302 ~~~~~~~~~~~~l~~~L~~~---~~~~~~~p~~g~f~~~~~~-~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~i 377 (403)
T TIGR01265 302 GKISVLKSNAELCYEELKDI---PGLVCPKPEGAMYLMVKLE-LELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWV 377 (403)
T ss_pred HHHHHHHHHHHHHHHHHhcC---CCceecCCCceeEEEEecc-ccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeE
Confidence 3344444555555555443 333322 345667777765 32100000135677775 5789999885 3689
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 402 YLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 402 R~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
|++++ ..++.+++++++|.+++.+
T Consensus 378 Ris~~--~~~~~l~~~l~~l~~~~~~ 401 (403)
T TIGR01265 378 RITIT--VPESMLEEACSRIKEFCER 401 (403)
T ss_pred EEEec--CCHHHHHHHHHHHHHHHHh
Confidence 99766 4688999999999998865
No 210
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.90 E-value=4e-21 Score=188.04 Aligned_cols=303 Identities=14% Similarity=0.137 Sum_probs=190.4
Q ss_pred CCCHHHHHHHHHHHhhcC----CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCC
Q psy14484 74 LTHKPVIKLSEKLSSLTQ----YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNI 149 (430)
Q Consensus 74 ~~~~~~~~l~~~l~~~~~----~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~ 149 (430)
+...++.++++.+.+.++ .++++|++|+|+++|++.++.+++. +++.|++..|.|.++........+
T Consensus 96 G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~--------pGD~Vlv~~P~Y~~f~~~~~~~~g- 166 (447)
T PLN02607 96 GLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILAD--------PGDALLVPTPYYPGFDRDLRWRTG- 166 (447)
T ss_pred chHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCC--------CCCEEEEcCCCCcchHHHHHhcCC-
Confidence 334566778877776543 5778999999999999998887765 678999999999887543221111
Q ss_pred ccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhC---CCCeEEEEEccccccCCCcccCChHHHH
Q psy14484 150 QSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKN---HNKIAAIIIEPLVQCAGGMIMYDSIYLK 226 (430)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~~~vi~ep~v~~~~G~~~~~~~~l~ 226 (430)
.+.+.++....... ..|++++++++++. +.+++++++.. ++|++| ..++++.++
T Consensus 167 -----------~~vv~v~~~~~~~f----------~~~~~~le~a~~~a~~~~~~vk~lll~n-P~NPtG-~~~s~e~l~ 223 (447)
T PLN02607 167 -----------VKIVPIHCDSSNNF----------QVTPQALEAAYQEAEAANIRVRGVLITN-PSNPLG-ATVQRSVLE 223 (447)
T ss_pred -----------cEEEEEeCCCCCCC----------cCCHHHHHHHHHHHHHhCCCeeEEEEeC-CCCCcC-cccCHHHHH
Confidence 11222322211100 01778888888653 34677777766 778888 677889999
Q ss_pred HHHHHHHhcCCEEEEeccccCCCCcccccc--cc---cCCC-C-Cc----eeeeecccC-CCccccEEEEE-cHHHHHhh
Q psy14484 227 LVREICNNYNIHLIADEIAVGCGRTGKFFA--CE---HAEI-W-PD----FLCLSKGIT-GGYLPLSLVMT-TDKIYNSI 293 (430)
Q Consensus 227 ~l~~l~~~~gi~li~DEv~~g~g~~g~~~~--~~---~~~~-~-~d----~~~~sK~l~-gG~~~ig~~~~-~~~~~~~~ 293 (430)
+|.++|++|++++|+||+|..+.+.+..+. .+ ..+. . ++ +.+|||.++ .| +|+|+++. ++++.+.+
T Consensus 224 ~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~G-lRvG~ivs~n~~l~~~~ 302 (447)
T PLN02607 224 DILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTA 302 (447)
T ss_pred HHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCc-ceEEEEEEcCHHHHHHH
Confidence 999999999999999999987533322221 11 1110 1 22 337999997 57 89999998 56676655
Q ss_pred hccCCcccccccCCC-CCCHHHHHHHHHHHHHHhhcCHH--------HHHHHHHHHHHHHHHchhcCCCeeeEee-cceE
Q psy14484 294 YYKNNINIFLHSHSY-SGNPLACCAALATLEIFNKDNIL--------QRISQDMKKITKALTSLITHPKIINFRQ-KGMI 363 (430)
Q Consensus 294 ~~~~~~~~~~~~~t~-~~~~~~~~aa~~~l~~~~~~~~~--------~~~~~~~~~l~~~l~~l~~~~~~~~~~~-~g~~ 363 (430)
.. . ..+ ..+.+++.++...|+ ++++. +++++..+.+.+.|++. . +...++ .|+|
T Consensus 303 ~~--------~-~~~~~~s~~~q~~~~~~L~---d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~---g-i~~~~~~ag~f 366 (447)
T PLN02607 303 RR--------M-SSFTLVSSQTQHLLASMLS---DEEFTENYIRTNRERLRKRYEMIVQGLRRA---G-IECLKGNAGLF 366 (447)
T ss_pred HH--------H-hhcCCCCHHHHHHHHHHhC---CchhHHHHHHHHHHHHHHHHHHHHHHHHhC---C-CCcccCCeeEE
Confidence 44 1 122 235555555555443 33332 23333444444455443 2 223334 4677
Q ss_pred EEEEEeecCCc-cchhHHHHHHHHHHH-CCcEEeec-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 364 WAFDVIIEDPE-QIETFSKKFFVAALK-NELLLRPI-------GNTVYLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 364 ~~~~~~~~~~~-~~~~~a~~~~~~l~~-~Gv~~~~~-------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
+++.+. .... ...+...++++++++ .||.+.|+ .+++|++++. .+++++++++++|.+++.+
T Consensus 367 vw~~L~-~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~-~~~~~l~~gl~Ri~~~l~~ 437 (447)
T PLN02607 367 CWMNLS-PLLETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFAN-MSEDTLEVALKRIHRFMDR 437 (447)
T ss_pred EEEEch-HhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Confidence 777775 3211 011112467777765 69999885 2688886552 4789999999999998864
No 211
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.90 E-value=1.7e-21 Score=189.37 Aligned_cols=336 Identities=10% Similarity=0.019 Sum_probs=203.4
Q ss_pred EEEecccccccccCCCCC--HHHHHHHHHHHhhcc--ccccCCCCCHHHHHHHHHHHhhcC--CCCCeE--EEcCCchHH
Q psy14484 35 RYLDAISSWWVNLFGHSN--SYINKALKNQLNKLE--HVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHC--FYGSDGASA 106 (430)
Q Consensus 35 ~~lD~~~~~~~~~lG~~~--p~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v--~~~~sgteA 106 (430)
..+||..|....+-+..+ +.+.+++.+.+.... .+....+..++++.+++++.+... .++++| ++|+|+++|
T Consensus 27 ~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~a 106 (396)
T PRK09257 27 DKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGA 106 (396)
T ss_pred CcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHH
Confidence 568888875333323333 678888777654321 122233444566677776655432 256776 999999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCC--CCCCCCCCCCChhHHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITT--PDSRNINKGNSANEIA 184 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 184 (430)
+..++++..... +++.|++.+|+|.++.......+. ..+.++. ++.+..
T Consensus 107 l~~~~~~l~~~~------pGd~Vlv~~P~y~~~~~~~~~~g~-------------~~v~v~~~~~~~~~~---------- 157 (396)
T PRK09257 107 LRVGADFLKRAF------PDAKVWVSDPTWPNHRAIFEAAGL-------------EVKTYPYYDAATKGL---------- 157 (396)
T ss_pred HHHHHHHHHHhC------CCCeEEECCCCcccHHHHHHHcCC-------------cEEEEeccccccCcc----------
Confidence 999987664221 678999999999988554433222 2233433 112222
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCc-cc-cccc-ccCC
Q psy14484 185 RCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRT-GK-FFAC-EHAE 261 (430)
Q Consensus 185 ~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~-g~-~~~~-~~~~ 261 (430)
|++++++.+.++..+..++++.. .+|++| ...+.+.+++|.++|++||+++|.||+|.++... +. .... ...+
T Consensus 158 --d~~~l~~~~~~~~~~~~~~i~~~-p~NPTG-~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~ 233 (396)
T PRK09257 158 --DFDAMLADLSQAPAGDVVLLHGC-CHNPTG-ADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAA 233 (396)
T ss_pred --CHHHHHHHHHhCCCCCEEEEeCC-CCCCCC-CCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHh
Confidence 88999988875434445566566 888998 6678899999999999999999999999988542 11 1111 1111
Q ss_pred CCC---ceeeeecccCC-CccccEEEEE---cHHH----HHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHH-----
Q psy14484 262 IWP---DFLCLSKGITG-GYLPLSLVMT---TDKI----YNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIF----- 325 (430)
Q Consensus 262 ~~~---d~~~~sK~l~g-G~~~ig~~~~---~~~~----~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~----- 325 (430)
..+ -+-+|||.++. | +|+|++++ +++. ...+.. .......+.+.+.+.++...|+.-
T Consensus 234 ~~~~vi~i~SfSK~~~~~G-lRiG~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 306 (396)
T PRK09257 234 AGLELLVASSFSKNFGLYG-ERVGALSVVAEDAEEADRVLSQLKA------TIRTNYSNPPAHGAAIVATILNDPELRAE 306 (396)
T ss_pred cCCcEEEEEEcCCcCcccc-ccceeEEEEeCCHHHHHHHHHHHHH------HhhhhcCCCcHHHHHHHHHHhCCHHHHHH
Confidence 112 23479999985 7 89999873 3333 233322 111223334566666555555311
Q ss_pred -h--hcCHHHHHHHHHHHHHHHHHchhcCC-CeeeEeecceEEEE-EEeecCCccchhHHHHHHHHHHHCCcEEeecCCE
Q psy14484 326 -N--KDNILQRISQDMKKITKALTSLITHP-KIINFRQKGMIWAF-DVIIEDPEQIETFSKKFFVAALKNELLLRPIGNT 400 (430)
Q Consensus 326 -~--~~~~~~~~~~~~~~l~~~l~~l~~~~-~~~~~~~~g~~~~~-~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~~~ 400 (430)
. -....+.++++.+.+.+.|++.. .+ .+....++|.|+.| .+. . ..+.+.+.++||.+.|.+
T Consensus 307 ~~~~~~~~r~~~~~rr~~l~~~L~~~~-~~~~~~~~~p~gg~~~w~~l~-~---------~~~~~l~~~~~V~~~p~~-- 373 (396)
T PRK09257 307 WEAELEEMRERIKAMRQLLVEALKAKG-PSRDFDFIARQRGMFSYSGLT-P---------EQVDRLREEFGVYAVGSG-- 373 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCCcccccccceEEEecCCC-H---------HHHHHHHHcCCEEEcCCC--
Confidence 0 12234555666666666666541 11 12333455555444 332 1 234444467799988753
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 401 VYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 401 lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
||+++ ..++++|++++++|++++
T Consensus 374 -ri~~~-~~~~~~i~~~~~~i~~~~ 396 (396)
T PRK09257 374 -RINVA-GLNESNIDYVAEAIAAVL 396 (396)
T ss_pred -eEEEe-eCCHHHHHHHHHHHHhhC
Confidence 88654 379999999999998753
No 212
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.90 E-value=1.6e-21 Score=187.55 Aligned_cols=298 Identities=9% Similarity=0.036 Sum_probs=186.0
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhh
Q psy14484 77 KPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIY 156 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~ 156 (430)
+...++.+.++++++ .+.+.+++||++++..++..+.. +++.|++..+.++... ......+
T Consensus 51 ~~~~~~~e~lA~~~g--~~~~~i~~g~~~a~~~~~~~l~~--------~gd~Vl~~~~~h~s~~-~~~~~~g-------- 111 (370)
T TIGR02539 51 PPIHDFLEDLAEFLG--MDEARVTHGAREGKFAVMHALCK--------EGDWVVLDGLAHYTSY-VAAERAG-------- 111 (370)
T ss_pred hHHHHHHHHHHHHhC--CCceEEECChHHHHHHHHHHhhC--------CCCEEEECCcccHHHH-HHHHHcC--------
Confidence 466788888999984 45778899999999999887764 5567777555543322 2222121
Q ss_pred hccCCCeeEeCCCC--CCCCCCCCChhHHHHHHHHHHHHHHHhC----CCCeEEEEEccccccCCCcccCChHHHHHHHH
Q psy14484 157 TSLLNKTYIITTPD--SRNINKGNSANEIARCAIFDLEILLKKN----HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVRE 230 (430)
Q Consensus 157 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~le~~l~~~----~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~ 230 (430)
.+...++... .+. .|+++|++.+++. ..++.+|+++. +++++|...+ +++|.+
T Consensus 112 ----~~~~~~~~~~~~~~~------------~d~~~l~~~l~~~~~~~~~~~~lv~~~~-p~~~~G~~~~----l~~i~~ 170 (370)
T TIGR02539 112 ----LNVKEVPHTGHPEYK------------VDPEGYGEVIEEVEDESGKPPVLALLTH-VDGEYGNLPD----AGKVAK 170 (370)
T ss_pred ----CEEEEEecCCcccCC------------cCHHHHHHHHHHhhhccCCCcEEEEEEC-CCCCCccccC----HHHHHH
Confidence 2223333221 111 1789999888642 13567788887 8888998877 999999
Q ss_pred HHHhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCCccccEEEEEcHHHHHhhhccCCcccccc----
Q psy14484 231 ICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLH---- 304 (430)
Q Consensus 231 l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~---- 304 (430)
+|+++|+++|+||+|+ ++..+. ......+|++ +++|++++| .|+|++++++++++.+... .+++..
T Consensus 171 la~~~~~~livDea~~-~g~~~~----~~~~~~~di~v~s~sK~~~~~-g~~G~l~~~~~~i~~l~~~--~~~~~~~~~~ 242 (370)
T TIGR02539 171 VCREKGVPLLLNCAYT-VGRMPV----SAKEIGADFIVGSGHKSMAAS-GPCGVLGMSEEWEDIVLRK--SRYSPVKEVE 242 (370)
T ss_pred HHHHcCCeEEEECccc-cCCcCC----CHHHcCCCEEEeeCcccccCC-CCEEEEEECHHHHhhhccc--ccCCccceee
Confidence 9999999999999997 432221 1112235654 788999876 4899999999998887651 111111
Q ss_pred --cCCCCCCHHHHHHHHHHHHHHhh-cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCc---cchh
Q psy14484 305 --SHSYSGNPLACCAALATLEIFNK-DNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPE---QIET 378 (430)
Q Consensus 305 --~~t~~~~~~~~~aa~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~ 378 (430)
+++. ...++.++.++++...+ -....+..++.+++++.|+++ .+..+...+....++.+... .-.. ....
T Consensus 243 ~~~~~~--~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~-~~~~~~~~~~~ 318 (370)
T TIGR02539 243 LLGCTS--RGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAELEDI-GFIQLGQKPKEHDLVKFETP-GFHEIAQKHKR 318 (370)
T ss_pred eecccc--cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CcEEEccCCCcCceEEEECC-chhHHhhhhcc
Confidence 0111 11244455555653211 111222233456788888776 22111111345666666543 2100 0000
Q ss_pred HHHHHHHHHHHCCcE-Eeec-CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 379 FSKKFFVAALKNELL-LRPI-GNTVYLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 379 ~a~~~~~~l~~~Gv~-~~~~-~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
.+..+.+.|+++||. +.+. .+.+|+++. .++++++++++++|++++++
T Consensus 319 ~~~~~~~~L~e~GI~~ir~~~~~~iRis~~-~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 319 RGYFLYEELKKRGIHGIRSGQTKYFKLSVY-GLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred ccHHHHHHHHhCCCccccCCcceEEEEEec-CCCHHHHHHHHHHHHHHHHh
Confidence 135689999999997 6654 358999974 68999999999999998875
No 213
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.90 E-value=3.7e-21 Score=190.36 Aligned_cols=299 Identities=14% Similarity=0.118 Sum_probs=190.6
Q ss_pred CHHHHHHHHHHHhhcC----CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCcc
Q psy14484 76 HKPVIKLSEKLSSLTQ----YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 151 (430)
Q Consensus 76 ~~~~~~l~~~l~~~~~----~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~ 151 (430)
.++++.+++.+.+..+ .++++|++|+|+++|++.++++++. +++.|++.+|+|.++........+
T Consensus 97 ~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~--------pGD~Vlv~~P~Y~~~~~~~~~~~G--- 165 (496)
T PLN02376 97 KKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLAD--------PGDVFLIPSPYYAAFDRDLRWRTG--- 165 (496)
T ss_pred HHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCC--------CCCEEEECCCCccchHHHHHhhCC---
Confidence 4566777777776543 5788999999999999999998875 678999999999987543221111
Q ss_pred chhhhhccCCCeeEeCCCC--CCCCCCCCChhHHHHHHHHHHHHHHHhC---CCCeEEEEEccccccCCCcccCChHHHH
Q psy14484 152 FKEIYTSLLNKTYIITTPD--SRNINKGNSANEIARCAIFDLEILLKKN---HNKIAAIIIEPLVQCAGGMIMYDSIYLK 226 (430)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~~~vi~ep~v~~~~G~~~~~~~~l~ 226 (430)
...+.++... .++. |++++++++++. ..+++++++.. ++|++| ...+.+.++
T Consensus 166 ---------~~vv~v~~~~~~~~~~------------~~~~le~a~~~a~~~~~~~k~l~l~n-P~NPTG-~~~s~e~l~ 222 (496)
T PLN02376 166 ---------VEIIPVPCSSSDNFKL------------TVDAADWAYKKAQESNKKVKGLILTN-PSNPLG-TMLDKDTLT 222 (496)
T ss_pred ---------CEEEEEeCCCCccCcC------------CHHHHHHHHHHHHhcCCCeeEEEEcC-CCCCCC-ccCCHHHHH
Confidence 1223343321 1121 677777665321 24677666666 788888 667788899
Q ss_pred HHHHHHHhcCCEEEEeccccCCCCccccc-cc-cc---CC---CCCc----eeeeecccC-CCccccEEEEEc-HHHHHh
Q psy14484 227 LVREICNNYNIHLIADEIAVGCGRTGKFF-AC-EH---AE---IWPD----FLCLSKGIT-GGYLPLSLVMTT-DKIYNS 292 (430)
Q Consensus 227 ~l~~l~~~~gi~li~DEv~~g~g~~g~~~-~~-~~---~~---~~~d----~~~~sK~l~-gG~~~ig~~~~~-~~~~~~ 292 (430)
+|.++|++|++++|+||+|..+.+.+..+ .. +. .+ ..++ +.+|||.++ .| +|+|+++.+ +.+.+.
T Consensus 223 ~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpG-lRvG~li~~~~~l~~~ 301 (496)
T PLN02376 223 NLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPG-FRVGIVYSFNDSVVSC 301 (496)
T ss_pred HHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCc-ceEEEEEECCHHHHHH
Confidence 99999999999999999999875444322 11 11 01 1223 237999997 57 899999995 555554
Q ss_pred hhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCH--------HHHHHHHHHHHHHHHHchhcCCCeeeEee-cceE
Q psy14484 293 IYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNI--------LQRISQDMKKITKALTSLITHPKIINFRQ-KGMI 363 (430)
Q Consensus 293 ~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~--------~~~~~~~~~~l~~~l~~l~~~~~~~~~~~-~g~~ 363 (430)
+.. .......+.+.+.++.+.|+ +..+ .+++++..+.+.+.|++. ++...++ -|++
T Consensus 302 ~~~--------~~~~~~vs~~~Q~a~~~~L~---d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~----gi~~~~~~aG~f 366 (496)
T PLN02376 302 ARK--------MSSFGLVSSQTQLMLASMLS---DDQFVDNFLMESSRRLGIRHKVFTTGIKKA----DIACLTSNAGLF 366 (496)
T ss_pred HHH--------HhhcCCCCHHHHHHHHHHhC---ChhHHHHHHHHHHHHHHHHHHHHHHHHHHC----CCcccCCCceEE
Confidence 433 11222345666666665553 3233 233344444444555432 2222333 3577
Q ss_pred EEEEEeecCCcc--chhHHHHHHHHHHHC-CcEEeec-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 364 WAFDVIIEDPEQ--IETFSKKFFVAALKN-ELLLRPI-------GNTVYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 364 ~~~~~~~~~~~~--~~~~a~~~~~~l~~~-Gv~~~~~-------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
+++++. ..... ......++++.+.++ ||.+.|+ .+++|++++. .+++++++++++|++++.
T Consensus 367 lwi~l~-~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~-~~~~~l~~al~rl~~~l~ 437 (496)
T PLN02376 367 AWMDLR-HLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFAN-MDDDTLHVALGRIQDFVS 437 (496)
T ss_pred EEEEch-hhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeC-CCHHHHHHHHHHHHHHHH
Confidence 777775 32111 111125688887765 9999985 2688987652 568999999999999885
No 214
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.90 E-value=3.6e-21 Score=185.14 Aligned_cols=301 Identities=16% Similarity=0.198 Sum_probs=199.1
Q ss_pred CHHHHHHHHHHHhhcCCCCC--eEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccch
Q psy14484 76 HKPVIKLSEKLSSLTQYKLG--HCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFK 153 (430)
Q Consensus 76 ~~~~~~l~~~l~~~~~~~~~--~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~ 153 (430)
.+..+++++.+++++++..+ .|++++||+++++.++..+.. +++++++..+++++......
T Consensus 34 ~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~--------~~~~vlv~~~~~~~~~~~~~--------- 96 (363)
T TIGR02326 34 NIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVP--------KDGKLLVVINGAYGARIVQI--------- 96 (363)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCC--------CCCeEEEEeCChhhHHHHHH---------
Confidence 35567788999999986543 699999999999999987754 44566666666666531110
Q ss_pred hhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHH
Q psy14484 154 EIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICN 233 (430)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~ 233 (430)
.......++.++.+.+... |+++++++++.+ .++.++.+.. +.+++|...| +++|.++|+
T Consensus 97 --a~~~g~~~~~v~~~~~~~~------------d~~~l~~~l~~~-~~~~~v~~~~-~~~~tG~~~~----i~~I~~l~~ 156 (363)
T TIGR02326 97 --AEYLGIPHHVVDTGEVEPP------------DVVEVEAILAAD-PAITHIALVH-CETTTGILNP----IEAVAKLAH 156 (363)
T ss_pred --HHHcCCceEEEeCCCCCCC------------CHHHHHHHHhhC-CCccEEEEEe-ecCCccccCc----HHHHHHHHH
Confidence 0111234455555432222 789999998753 2455666666 7788998888 999999999
Q ss_pred hcCCEEEEeccccCCCCcccccccccCCCCCceee--eecccCCCccccEEEEEcHHHHHhhhccCCccccc--------
Q psy14484 234 NYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFL-------- 303 (430)
Q Consensus 234 ~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~--~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~-------- 303 (430)
++|+++|+|++|+ +|.. .+... .+.+|+++ ++|+++|+ .++|+++++++..+.+... ..++.
T Consensus 157 ~~g~~livD~~~~-~g~~--~~~~~--~~~~D~~~~s~~K~l~~p-~G~G~l~~~~~~~~~~~~~--~~~~~~~~~~~~~ 228 (363)
T TIGR02326 157 RHGKVTIVDAMSS-FGGI--PIDIA--ELHIDYLISSANKCIQGV-PGFGFVIARQAELAACKGN--ARSLSLDLYDQWR 228 (363)
T ss_pred HcCCEEEEEcccc-ccCc--ccchh--hcCccEEEecCccccccC-CcceEEEECHHHHHHhhcC--CCceeecHHHHHH
Confidence 9999999999986 5433 22233 33467664 56998765 4689999999877654320 11100
Q ss_pred ------ccCCCCCCHHHHHHHHHHHHHHhhc----CHHHHHHHHHHHHHHHHHchhcCCCeeeE-eecceEEEEEEeecC
Q psy14484 304 ------HSHSYSGNPLACCAALATLEIFNKD----NILQRISQDMKKITKALTSLITHPKIINF-RQKGMIWAFDVIIED 372 (430)
Q Consensus 304 ------~~~t~~~~~~~~~aa~~~l~~~~~~----~~~~~~~~~~~~l~~~l~~l~~~~~~~~~-~~~g~~~~~~~~~~~ 372 (430)
....|+.+.....+..++++.+..+ +..++++++.+++++.|+++ ....+... ...+.+..+.+. ..
T Consensus 229 ~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-~~ 306 (363)
T TIGR02326 229 CMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL-GFEPLLDDEIQSPIITSFYSP-ED 306 (363)
T ss_pred HHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCceEEEEECC-CC
Confidence 0123455666667767777655332 34567788888888888765 22222111 123344555554 32
Q ss_pred CccchhHHHHHHHHHHHCCcEEeec----CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 373 PEQIETFSKKFFVAALKNELLLRPI----GNTVYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 373 ~~~~~~~a~~~~~~l~~~Gv~~~~~----~~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
.. .. ...+.+.|.++||.+.++ .+.+|+++...++.+++++++++|++++.
T Consensus 307 ~~-~~--~~~v~~~L~~~gi~v~~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 307 PD-YR--FADFYQRLKEQGFVIYPGKVSQVDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred CC-CC--HHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 11 11 356889999999999876 36899998778899999999999998764
No 215
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.90 E-value=1.5e-21 Score=190.13 Aligned_cols=340 Identities=10% Similarity=0.044 Sum_probs=204.2
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhc------cccccCCCCCHHHHHHHHHHHhhcC--CCCCeEE--EcCCc
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKL------EHVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCF--YGSDG 103 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~------~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~--~~~sg 103 (430)
...+|+..|.... +. .++.+.+++.+++... ..+..+.+..++++.+++++.+..+ ..+++|. .|+|+
T Consensus 29 ~~~i~l~~g~~~~-~~-~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~ 106 (404)
T PTZ00376 29 PSKVNLGIGAYRD-EN-GKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSG 106 (404)
T ss_pred cccEecccceeEC-CC-CCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCc
Confidence 4668877763211 21 2233445555543221 1122223334566666666644331 3667888 48999
Q ss_pred hHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCC-C-CCCCCCCCCChh
Q psy14484 104 ASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITT-P-DSRNINKGNSAN 181 (430)
Q Consensus 104 teA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~ 181 (430)
++|...++.++.... .+++.|++.+|+|+++.......+. ....++. + +.+..
T Consensus 107 ~~al~~~~~~l~~~~-----~~Gd~Vlv~~P~y~~~~~~~~~~G~-------------~~~~v~l~~~~~~~~------- 161 (404)
T PTZ00376 107 TGALRLGFEFLKRFL-----PAGTTVYVSNPTWPNHVNIFKSAGL-------------NVKEYRYYDPKTKGL------- 161 (404)
T ss_pred chHHHHHHHHHHHhc-----CCCCEEEEcCCCchhHHHHHHHcCC-------------ceeeccccCcccCCc-------
Confidence 999998876543221 1568999999999988554443322 2233333 1 11222
Q ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc---cccc-
Q psy14484 182 EIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK---FFAC- 257 (430)
Q Consensus 182 ~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~---~~~~- 257 (430)
|++.+++.+++..++..++++.. ++|++| ...+.+.+++|.++|++|++++|+||+|.+|...+. ....
T Consensus 162 -----d~~~l~~~~~~~~~~~~~~~~~~-p~NPTG-~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~ 234 (404)
T PTZ00376 162 -----DFDGMLEDLRTAPNGSVVLLHAC-AHNPTG-VDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIR 234 (404)
T ss_pred -----CHHHHHHHHHhCCCCCEEEEeCC-CCCCCC-CCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHH
Confidence 78899988875433456666666 888888 667889999999999999999999999998855331 1011
Q ss_pred ccCCCC---CceeeeecccC-CCccccEEE---EEcHHHHHhhhccCCcccccccCCC-CCCHHHHHHHHHHHHHHh---
Q psy14484 258 EHAEIW---PDFLCLSKGIT-GGYLPLSLV---MTTDKIYNSIYYKNNINIFLHSHSY-SGNPLACCAALATLEIFN--- 326 (430)
Q Consensus 258 ~~~~~~---~d~~~~sK~l~-gG~~~ig~~---~~~~~~~~~~~~~~~~~~~~~~~t~-~~~~~~~~aa~~~l~~~~--- 326 (430)
...... .-+.+|||.++ .| +|+|++ ++++++.+.+.. .... ....++ +.+.+++.++..+|+.-+
T Consensus 235 ~~~~~~~~vi~i~SfSK~~~~~G-lRvG~~~~~~~~~~~~~~l~~--~~~~-~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 310 (404)
T PTZ00376 235 LFAERGVEFLVAQSFSKNMGLYG-ERIGALHIVCANKEEAANVLS--QLKL-IIRPMYSSPPIHGARIADRILSDPELRA 310 (404)
T ss_pred HHHhcCCcEEEEEeCCCcccccc-cccceEEEEeCCHHHHHHHHH--HHHH-HHhhhcCCCchHHHHHHHHHhCCHHHHH
Confidence 111111 22347999998 57 899998 467765544321 0000 112233 335677777776664211
Q ss_pred -----hcCHHHHHHHHHHHHHHHHHchhcCC-CeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHC-CcEEeecCC
Q psy14484 327 -----KDNILQRISQDMKKITKALTSLITHP-KIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKN-ELLLRPIGN 399 (430)
Q Consensus 327 -----~~~~~~~~~~~~~~l~~~l~~l~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~-Gv~~~~~~~ 399 (430)
.....++++++.+.+.+.|+++ ..+ .+....++|.|+.|... + .+++++|.++ ||.+.|++
T Consensus 311 ~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~~~~~p~gg~f~~~~~-~---------~~~~~~L~~~~~v~v~p~~- 378 (404)
T PTZ00376 311 EWLSELKEMSGRIQNMRQLLYDELKAL-GSPGDWEHIINQIGMFSFTGL-T---------KEQVERLIEKYHIYLLDNG- 378 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCcccccccCceEEEecCC-C---------HHHHHHHHHhCCEeecCCC-
Confidence 0122345566666676777655 222 12233456666554322 1 3578888877 99998874
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 400 TVYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 400 ~lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
|++++. .+++++++++++|++++.
T Consensus 379 --Ris~~~-~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 379 --RISVAG-LTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred --eEEEec-cCHHhHHHHHHHHHHHHh
Confidence 887643 799999999999998865
No 216
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.90 E-value=3.2e-21 Score=185.09 Aligned_cols=319 Identities=14% Similarity=0.097 Sum_probs=202.6
Q ss_pred CCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCC-CeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEE
Q psy14484 51 SNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKL-GHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKF 129 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~v 129 (430)
.++++.+++.+.+.. .......+..+++++.+++.+++.. +.+++++||++|+..++..... +++.|
T Consensus 10 ~~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~--------~g~~v 77 (356)
T cd06451 10 VPPRVLKAMNRPMLG----HRSPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLE--------PGDKV 77 (356)
T ss_pred CCHHHHHHhCCCccC----CCCHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCC--------CCCEE
Confidence 356777777543321 1111123446789999999998644 3578999999999999987653 55778
Q ss_pred EEEcCCCCCcc-hhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEc
Q psy14484 130 ICLQNSYHGET-LGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIE 208 (430)
Q Consensus 130 l~~~~~yhg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~e 208 (430)
++..+++++.. ..... ....++..++.+.... .|++++++.+++ .+++++++.
T Consensus 78 l~~~~~~~~~~~~~~~~------------~~g~~~~~v~~~~~~~------------~~~~~l~~~i~~--~~~~~v~i~ 131 (356)
T cd06451 78 LVGVNGVFGDRWADMAE------------RYGADVDVVEKPWGEA------------VSPEEIAEALEQ--HDIKAVTLT 131 (356)
T ss_pred EEecCCchhHHHHHHHH------------HhCCCeEEeecCCCCC------------CCHHHHHHHHhc--cCCCEEEEe
Confidence 88776665521 11111 1122334444332222 278999999873 367778777
Q ss_pred cccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceee--eecccCCCccccEEEEEc
Q psy14484 209 PLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGGYLPLSLVMTT 286 (430)
Q Consensus 209 p~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~--~sK~l~gG~~~ig~~~~~ 286 (430)
. +++++|.+.+ +++|.++|+++|+++++|++|+ +|.. .+.... ..+|+++ .+|.++++ .++|+++.+
T Consensus 132 ~-~~~~~G~~~~----~~~i~~~a~~~~~~li~D~~~~-~g~~--~~~~~~--~~~d~~~~s~~K~l~~p-~g~G~l~~~ 200 (356)
T cd06451 132 H-NETSTGVLNP----LEGIGALAKKHDALLIVDAVSS-LGGE--PFRMDE--WGVDVAYTGSQKALGAP-PGLGPIAFS 200 (356)
T ss_pred c-cCCCcccccC----HHHHHHHHHhcCCEEEEeeehh-ccCc--cccccc--cCccEEEecCchhccCC-CCcceeEEC
Confidence 7 7888998777 9999999999999999999986 5432 122222 2356665 46998875 468999999
Q ss_pred HHHHHhhhc-cCCcccc---------cc---cCCCCCCHHHHHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHHHchhc
Q psy14484 287 DKIYNSIYY-KNNINIF---------LH---SHSYSGNPLACCAALATLEIFNK---DNILQRISQDMKKITKALTSLIT 350 (430)
Q Consensus 287 ~~~~~~~~~-~~~~~~~---------~~---~~t~~~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~l~~ 350 (430)
+++++.+.. +.....+ .. ....+.++..+.++.++++.+.. +...++.+++.+++.+.|+++ .
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g 279 (356)
T cd06451 201 ERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL-G 279 (356)
T ss_pred HHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-C
Confidence 988776642 0000000 00 11123345555666677766543 345667777888888888765 2
Q ss_pred CCCeeeEee-cceEEEEEEeecCCccchhHHHHHHHHHHHC-CcEEeec-----CCEEEEeCCCCCCHHHHHHHHHHHHH
Q psy14484 351 HPKIINFRQ-KGMIWAFDVIIEDPEQIETFSKKFFVAALKN-ELLLRPI-----GNTVYLMPPYILNKNEIQHMTSAIFQ 423 (430)
Q Consensus 351 ~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~-Gv~~~~~-----~~~lR~~~~~~~t~e~i~~~~~~l~~ 423 (430)
......... .+.+.++.+. ... . ...+++.|.++ ||.+.++ ++++|++++..+|++|+++++++|++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~-~~~--~---~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~ 353 (356)
T cd06451 280 LKLLAKPELRSPTVTAVLVP-EGV--D---GDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEE 353 (356)
T ss_pred CeeccCcccCCCceEEEECC-CCC--C---HHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 222211112 2233333333 211 1 35799999998 9998764 36899999999999999999999988
Q ss_pred HH
Q psy14484 424 TF 425 (430)
Q Consensus 424 ~l 425 (430)
++
T Consensus 354 ~~ 355 (356)
T cd06451 354 AL 355 (356)
T ss_pred Hh
Confidence 75
No 217
>PLN02231 alanine transaminase
Probab=99.90 E-value=5e-21 Score=190.47 Aligned_cols=331 Identities=14% Similarity=0.155 Sum_probs=209.0
Q ss_pred CHHHHHHHHHHHhhcc-----ccccCCCCCHHHHHHHHHHHhhc--CCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCC
Q psy14484 52 NSYINKALKNQLNKLE-----HVMLSNLTHKPVIKLSEKLSSLT--QYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFL 124 (430)
Q Consensus 52 ~p~v~~a~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~ 124 (430)
+.++++++.+.+.... .+..+.+..++++.+++++.+.. +.++++|++|+|+++|+..++++++..
T Consensus 142 p~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~------- 214 (534)
T PLN02231 142 SADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS------- 214 (534)
T ss_pred CHHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccC-------
Confidence 3456666566555421 12222344466677777776653 357789999999999999999988641
Q ss_pred CCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC--CCCCCCCCChhHHHHHHHHHHHHHHHhCC---
Q psy14484 125 NKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD--SRNINKGNSANEIARCAIFDLEILLKKNH--- 199 (430)
Q Consensus 125 ~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~le~~l~~~~--- 199 (430)
+++.|++..|+|.++.......+. ..+.++... .+.. |+++|++++++..
T Consensus 215 ~gd~Vli~~P~Y~~y~~~~~~~g~-------------~~v~~~l~~~~~~~~------------d~~~Le~~l~~~~~~~ 269 (534)
T PLN02231 215 EKDGILCPIPQYPLYSASIALHGG-------------TLVPYYLDEATGWGL------------EISELKKQLEDARSKG 269 (534)
T ss_pred CCCEEEEeCCCChhHHHHHHHcCC-------------EEEEEecCcccCCCC------------CHHHHHHHHHHHhhcC
Confidence 568899999999988655444332 112222221 1122 7899999887531
Q ss_pred CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCc-cccc-cccc----CCC---CCcee---
Q psy14484 200 NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRT-GKFF-ACEH----AEI---WPDFL--- 267 (430)
Q Consensus 200 ~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~-g~~~-~~~~----~~~---~~d~~--- 267 (430)
.+++++++.. ++|++| .+.+.+.+++|.++|++||++||.||+|..+.+. +..+ .+.. .+. ...++
T Consensus 270 ~~~k~ivl~n-P~NPTG-~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~ 347 (534)
T PLN02231 270 ITVRALVVIN-PGNPTG-QVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQ 347 (534)
T ss_pred CCeEEEEEeC-CCCCCC-cCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEe
Confidence 1566665555 678888 6778899999999999999999999999987553 2221 1111 111 12234
Q ss_pred eeecccC--CCccccEEEEE---cHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHH-------Hh-----hcCH
Q psy14484 268 CLSKGIT--GGYLPLSLVMT---TDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEI-------FN-----KDNI 330 (430)
Q Consensus 268 ~~sK~l~--gG~~~ig~~~~---~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~-------~~-----~~~~ 330 (430)
+|||.+. .| +|+|++.+ ++++.+.+.. . ...+.+.+.+++.++..+++- ++ .+.+
T Consensus 348 S~SK~~~g~pG-lRiGy~~~~~~~~~l~~~l~k------~-~~~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i 419 (534)
T PLN02231 348 SVSKGYYGECG-KRGGYMEVTGFTSDVREQIYK------V-ASVNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGI 419 (534)
T ss_pred ccCcccccCCc-cceEEEEEecCCHHHHHHHHH------H-HhhhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHH
Confidence 6899874 36 89999986 6788887765 1 222334455666666555521 10 1123
Q ss_pred HHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEE-EEee-cCCccch-----hHHHHHHHHHH-HCCcEEeecC----
Q psy14484 331 LQRISQDMKKITKALTSLITHPKIINFRQKGMIWAF-DVII-EDPEQIE-----TFSKKFFVAAL-KNELLLRPIG---- 398 (430)
Q Consensus 331 ~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~-~~~~-~~~~~~~-----~~a~~~~~~l~-~~Gv~~~~~~---- 398 (430)
.+.++++.+.+.+.|+++ +++...+++|.|+.| .+.. ....... .....++..|+ +.||.+.|+.
T Consensus 420 ~~~~~~r~~~l~~~L~~~---~gi~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~ 496 (534)
T PLN02231 420 LSSLARRAKTLEDALNSL---EGVTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQ 496 (534)
T ss_pred HHHHHHHHHHHHHHHhcC---CCceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCC
Confidence 455666777777777654 455556677888777 2210 1000000 00124666666 5699999852
Q ss_pred ----CEEEEeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 399 ----NTVYLMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 399 ----~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
..+|++ +..+++++++++++|.+++.+.+
T Consensus 497 ~~g~~~~Rit--~~~~~e~l~eal~RL~~~~~~~~ 529 (534)
T PLN02231 497 VPGTWHFRCT--ILPQEDKIPAIVSRLTEFHKSFM 529 (534)
T ss_pred CCCCCeEEEE--eCCCHHHHHHHHHHHHHHHHHHH
Confidence 247775 45789999999999999988764
No 218
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.90 E-value=7.1e-21 Score=184.17 Aligned_cols=333 Identities=9% Similarity=0.017 Sum_probs=205.0
Q ss_pred cccCCCCCHHHHHHHHHHHhhcccc-----ccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhh
Q psy14484 45 VNLFGHSNSYINKALKNQLNKLEHV-----MLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWY 119 (430)
Q Consensus 45 ~~~lG~~~p~v~~a~~~~~~~~~~~-----~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~ 119 (430)
..-+|.-++++++|+.+........ .......+...++++.++++++ .+.+++++|+++|+..+++.+..
T Consensus 26 ~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g--~~~~~~~~g~t~a~~~al~~l~~--- 100 (387)
T PRK09331 26 IQRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLG--MDEARVTHGAREGKFAVMHSLCK--- 100 (387)
T ss_pred hhcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHhcC---
Confidence 4557778899999999987432211 0111224567899999999995 46788999999999999988754
Q ss_pred hcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCC--CCCCCCCCCCChhHHHHHHHHHHHHHHHh
Q psy14484 120 NKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITT--PDSRNINKGNSANEIARCAIFDLEILLKK 197 (430)
Q Consensus 120 ~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~le~~l~~ 197 (430)
++++|++...++.+. ....... ......++. +..+. .|++++++.+++
T Consensus 101 -----~gd~Vlv~~~~h~s~-~~~~~~~------------G~~~~~v~~~~~~~~~------------~d~~~l~~~l~~ 150 (387)
T PRK09331 101 -----KGDYVVLDGLAHYTS-YVAAERA------------GLNVREVPKTGYPEYK------------ITPEAYAEKIEE 150 (387)
T ss_pred -----CCCEEEECCCchHHH-HHHHHHc------------CCEEEEEeCccCcCCC------------cCHHHHHHHHHH
Confidence 566777755443322 2212111 123344443 11111 278999998875
Q ss_pred C----CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeeeccc
Q psy14484 198 N----HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGI 273 (430)
Q Consensus 198 ~----~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK~l 273 (430)
+ .+++++|+++. +++++|...+ +++|.++|+++|+++|+|++|+ +|..+ +....++....+.+++|++
T Consensus 151 ~~~~~~~~~~lV~l~~-~~~~tG~~~~----l~~I~~la~~~g~~livD~a~~-~g~~~--~~~~~~g~D~~~~s~~K~l 222 (387)
T PRK09331 151 VKEETGKPPALALLTH-VDGNYGNLAD----AKKVAKVAHEYGIPFLLNGAYT-VGRMP--VDGKKLGADFIVGSGHKSM 222 (387)
T ss_pred hhhccCCCCEEEEEEC-CCCCCccccc----HHHHHHHHHHcCCEEEEECCcc-cCCcC--CCHHHcCCCEEEeeCcccc
Confidence 3 23688888888 8899998888 9999999999999999999997 43221 1222334333344677999
Q ss_pred CCCccccEEEEEcHHHHHhhhccCCccccc------ccCCCCCCHHHHHHHHHHHHHHhh-cCHHHHHHHHHHHHHHHHH
Q psy14484 274 TGGYLPLSLVMTTDKIYNSIYYKNNINIFL------HSHSYSGNPLACCAALATLEIFNK-DNILQRISQDMKKITKALT 346 (430)
Q Consensus 274 ~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~------~~~t~~~~~~~~~aa~~~l~~~~~-~~~~~~~~~~~~~l~~~l~ 346 (430)
+++ .++|++++++++++.+... .+++. .+++. .+....++.++++.+.+ ....++..++.+++++.|+
T Consensus 223 ~~~-~~~G~l~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~ 297 (387)
T PRK09331 223 AAS-APSGVLATTEEYADKVFRT--SRKFGVKEVELLGCTL--RGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELE 297 (387)
T ss_pred cCC-CCEEEEEECHHHHhhcccc--cCCCcccceeeeceec--CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 876 5899999999988776541 11111 11222 22233334445543322 2234445667778888887
Q ss_pred chhcCCCeeeEeecceEEEEEEeecCC---ccchhHHHHHHHHHHHCCcEEee-cCC-EEEEeCCCCCCHHHHHHHHHHH
Q psy14484 347 SLITHPKIINFRQKGMIWAFDVIIEDP---EQIETFSKKFFVAALKNELLLRP-IGN-TVYLMPPYILNKNEIQHMTSAI 421 (430)
Q Consensus 347 ~l~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~a~~~~~~l~~~Gv~~~~-~~~-~lR~~~~~~~t~e~i~~~~~~l 421 (430)
++..+..+..-.....++.++.. .-. ......+..+.+.|.++||...+ +.. .+|+. +..++++++++++++|
T Consensus 298 ~l~g~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~i~ri~-~~g~t~~di~~l~~aL 375 (387)
T PRK09331 298 KIEGFKQLGEKPRNHDLMKFETP-SFDEIAKKHKRRGFFLYEELKKRGIHGIKPGATKEFKLS-TYGLTWEQVEYVADAF 375 (387)
T ss_pred cCCCEEEeccCcCcCCeEEEeCC-chhHHhhhccccchhHHHHHHHcCceEEccCCceEEEEE-eccCCHHHHHHHHHHH
Confidence 66322222110123344444322 100 00000125689999999998543 333 45554 5568999999999999
Q ss_pred HHHHHH
Q psy14484 422 FQTFNE 427 (430)
Q Consensus 422 ~~~l~~ 427 (430)
++++.+
T Consensus 376 ~~i~~~ 381 (387)
T PRK09331 376 KEIAEK 381 (387)
T ss_pred HHHHHh
Confidence 998765
No 219
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=1.3e-21 Score=187.65 Aligned_cols=288 Identities=9% Similarity=0.087 Sum_probs=189.9
Q ss_pred HHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhh
Q psy14484 78 PVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYT 157 (430)
Q Consensus 78 ~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~ 157 (430)
...++++.+++.++.++++|++++|+++++..+++++.. ++++.|++.+|+|..+...... .
T Consensus 60 ~~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~-------~g~~~vlv~~p~y~~~~~~~~~-~---------- 121 (364)
T PRK04781 60 QPPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCV-------PGRDAVLVTPPVFGMYAVCARL-Q---------- 121 (364)
T ss_pred CHHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcC-------CCCCeEEEcCCChHHHHHHHHH-c----------
Confidence 356888888888888888999999999999999987764 1447788888887544322111 1
Q ss_pred ccCCCeeEeCCCCC-CCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcC
Q psy14484 158 SLLNKTYIITTPDS-RNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYN 236 (430)
Q Consensus 158 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g 236 (430)
..+...++..+. .... .|++++++.+. ..+++++++.. ++|++|.+. +.+.++++.+.|+ ++
T Consensus 122 --g~~~~~v~~~~~~~~~~----------~d~~~l~~~~~--~~~~~lv~l~~-p~NPTG~~~-~~~~~~~l~~~~~-~~ 184 (364)
T PRK04781 122 --NAPLVEVPLVDGADGFH----------ADVPAIVAAAL--ASNAKLVFLCS-PSNPAGSAI-ALDQIERALQALQ-GK 184 (364)
T ss_pred --CCEEEEEecCCCccCCC----------cCHHHHHHHHh--ccCCeEEEEcC-CCCCCCCCc-CHHHHHHHHHhCC-CC
Confidence 122334443211 0100 16677655543 24567777777 889999555 5666777777775 47
Q ss_pred CEEEEeccccCCCCcccccccccCCCCCc---eeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCH
Q psy14484 237 IHLIADEIAVGCGRTGKFFACEHAEIWPD---FLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNP 312 (430)
Q Consensus 237 i~li~DEv~~g~g~~g~~~~~~~~~~~~d---~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~ 312 (430)
+++|+||+|..|...... ....+..++ +-+|||.++ .| +|+|++++++++++.+.. ....++.+.
T Consensus 185 ~~iI~Deay~~f~~~~~~--~~~~~~~~~vi~~~SfSK~~gl~G-lRvGy~v~~~~l~~~l~~--------~~~~~~~~~ 253 (364)
T PRK04781 185 ALVVVDEAYGEFSDVPSA--VGLLARYDNLAVLRTLSKAHALAA-ARIGSLIANAELIAVLRR--------CQAPYPVPT 253 (364)
T ss_pred cEEEEeCcchhhcCCcch--HHHHhhCCCEEEEecChhhccccc-ceeeeeeCCHHHHHHHHh--------ccCCCCCCH
Confidence 999999999987532221 111122233 337999998 57 899999999999988876 334566677
Q ss_pred HHHHHHHHHHHHHh---hcCHHHHHHHHHHHHHHHHHchhcCCCee-eEeecceEEEEEEeecCCccchhHHHHHHHHHH
Q psy14484 313 LACCAALATLEIFN---KDNILQRISQDMKKITKALTSLITHPKII-NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAAL 388 (430)
Q Consensus 313 ~~~~aa~~~l~~~~---~~~~~~~~~~~~~~l~~~l~~l~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~ 388 (430)
+++.++..+|+.-. ..+..+.+++..+++.+.|+.+ +.+. ..+..|+++++.+. + ..++.+.|.
T Consensus 254 ~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~---~~~~~~~p~~g~f~~~~~~-~--------~~~~~~~l~ 321 (364)
T PRK04781 254 PCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQL---PGVRRVYPSQGNFLLVRFD-D--------AEAAFQALL 321 (364)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhC---CCCCeECCCCCcEEEEEcC-C--------HHHHHHHHH
Confidence 77777766664210 1122334455556666666554 3322 34566888877665 3 256888899
Q ss_pred HCCcEEeec------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 389 KNELLLRPI------GNTVYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 389 ~~Gv~~~~~------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
++||.+.++ ++++||++. ++++.++++++|++...
T Consensus 322 ~~gI~v~~~~~~~~~~~~~Ris~~---~~~~~~~l~~al~~~~~ 362 (364)
T PRK04781 322 AAGVVVRDQRAAPRLSDALRITLG---TPEQNDRVLAALQRTQA 362 (364)
T ss_pred HCCeEEeeCCCCCCCCCeEEEeCC---CHHHHHHHHHHHHHHHh
Confidence 999999885 268999866 78999999999987643
No 220
>KOG1360|consensus
Probab=99.90 E-value=6.6e-21 Score=171.66 Aligned_cols=322 Identities=17% Similarity=0.173 Sum_probs=227.9
Q ss_pred ccCCC-CCHHHHHHHHHHHhhcccc----ccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhh
Q psy14484 46 NLFGH-SNSYINKALKNQLNKLEHV----MLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYN 120 (430)
Q Consensus 46 ~~lG~-~~p~v~~a~~~~~~~~~~~----~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~ 120 (430)
.+||. .||+|.+|+++.+++++.. -+-.+.+....+|++.|+++. ..+..++++|..-||+..+-.+...
T Consensus 180 DYLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LH--qK~aALlFsSCfVANDstLftLak~--- 254 (570)
T KOG1360|consen 180 DYLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLH--QKEAALLFSSCFVANDSTLFTLAKK--- 254 (570)
T ss_pred ccccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHh--cCcceeeeeeeeeccchHHHHHHHH---
Confidence 45666 4999999999999986533 112344567789999999998 5667788899999999988765543
Q ss_pred cCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCC-
Q psy14484 121 KGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNH- 199 (430)
Q Consensus 121 ~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~- 199 (430)
=.+-+|.-+.+.|.+.+..+..++.+- .. +.+ ||++.|++.++..+
T Consensus 255 ----lpgcei~SD~gNHASMI~GIrns~v~K------------~I--FrH---------------ND~~hL~~lL~~~~~ 301 (570)
T KOG1360|consen 255 ----LPGCEIFSDEGNHASMIQGIRNSRVPK------------HI--FRH---------------NDLDHLEQLLQSSPK 301 (570)
T ss_pred ----CCCcEEeccccchHHHHHHhhhcCCcc------------ee--ecc---------------CCHHHHHHHHHhCCC
Confidence 234566667788887666555444221 11 222 49999999998874
Q ss_pred CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccc--cccCCC--CCcee--eeeccc
Q psy14484 200 NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA--CEHAEI--WPDFL--CLSKGI 273 (430)
Q Consensus 200 ~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~--~~~~~~--~~d~~--~~sK~l 273 (430)
..++.|.+|+ |+++.|.+.| |++|.+++++||++..+|||++ .|-.|..++ -+..|+ +.||+ |++|++
T Consensus 302 svPKivAFEt-VhSM~Gavcp----leelcDvah~yGAiTFlDEVHA-VGlYG~rGaGvgerdGvm~kvDiIsGTLgKaf 375 (570)
T KOG1360|consen 302 SVPKIVAFET-VHSMDGAVCP----LEELCDVAHKYGAITFLDEVHA-VGLYGPRGAGVGERDGVMHKVDIISGTLGKAF 375 (570)
T ss_pred CCCceEEEee-eeccCCCcCC----HHHHHHHHHHhCceeeeehhhh-hccccCCCCCccccCCcchhhhhcccchhhhc
Confidence 4678889999 9999999999 9999999999999999999998 555565332 244454 46887 699999
Q ss_pred CCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhc---CHHHHHHHHHHHHHHHHHchhc
Q psy14484 274 TGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD---NILQRISQDMKKITKALTSLIT 350 (430)
Q Consensus 274 ~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~---~~~~~~~~~~~~l~~~l~~l~~ 350 (430)
|.= -|++..+..+++.++.. ...| ..|.+-.|..++.|+++.++++.+ .++..-+++..++++.|.++ +
T Consensus 376 GcV---GGYIAat~~LvDmiRSy--AaGF--IFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~-G 447 (570)
T KOG1360|consen 376 GCV---GGYIAATRKLVDMIRSY--AAGF--IFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL-G 447 (570)
T ss_pred ccc---cceehhhhhHHHHHHHh--cCce--EEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc-C
Confidence 861 15688999999888762 1122 234455677788888888888653 23344456677777777766 4
Q ss_pred CCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHH-CCcEEee--------cCCEEEEeCCCCCCHHHHHHHHHHH
Q psy14484 351 HPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALK-NELLLRP--------IGNTVYLMPPYILNKNEIQHMTSAI 421 (430)
Q Consensus 351 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~-~Gv~~~~--------~~~~lR~~~~~~~t~e~i~~~~~~l 421 (430)
+|.+.. -..++-+... ....+.+.+..|+. +||++.. +...+|+.|...+|++-++.+++.|
T Consensus 448 iPVi~~---pSHIiPv~vg------da~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l 518 (570)
T KOG1360|consen 448 IPVIPN---PSHIIPVRVG------DAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNAL 518 (570)
T ss_pred CcccCC---Ccceeeeecc------CHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHH
Confidence 454322 1223333333 23335677887764 4998864 2368999999999999999999999
Q ss_pred HHHHHHh
Q psy14484 422 FQTFNEV 428 (430)
Q Consensus 422 ~~~l~~~ 428 (430)
..+.+++
T Consensus 519 ~~vw~~v 525 (570)
T KOG1360|consen 519 LDVWNEV 525 (570)
T ss_pred HHHHHHc
Confidence 8887654
No 221
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.90 E-value=1.1e-20 Score=183.98 Aligned_cols=330 Identities=11% Similarity=0.059 Sum_probs=205.1
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCC-----CCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNL-----THKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVE 108 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~-----~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~ 108 (430)
..|+|..+ .|..++.+++++.+.+..........+ ..+..+++++.+++.++...+++++++|+++++.
T Consensus 18 ~~yl~~~~------~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~ 91 (397)
T TIGR01976 18 RVFFDNPA------GTQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTF 91 (397)
T ss_pred eEEecCCc------cCCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHH
Confidence 47888544 334678999999998865321111111 1244678999999999877678999999999998
Q ss_pred HHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC-CCCCCCCCChhHHHHHH
Q psy14484 109 VALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD-SRNINKGNSANEIARCA 187 (430)
Q Consensus 109 ~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d 187 (430)
.++.+..... .++++|++.++.|++........ ......+...++.+. .... |
T Consensus 92 ~~~~~~~~~~-----~~gd~vl~~~~~~~s~~~~~~~~---------~~~~g~~~~~~~~~~~~~~~------------~ 145 (397)
T TIGR01976 92 LLSRAISRRW-----GPGDEVIVTRLDHEANISPWLQA---------AERAGAKVKWARVDEATGEL------------H 145 (397)
T ss_pred HHHHHHHhcC-----CCCCEEEEcCCchHhHHHHHHHH---------HHhcCCEEEEEeccccCCCc------------C
Confidence 7776653210 14567888777765542111010 000112233444332 1111 7
Q ss_pred HHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCcee
Q psy14484 188 IFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL 267 (430)
Q Consensus 188 ~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~ 267 (430)
++++++.++ +++++++++. +++++|.+.+ +++|.++|+++|+++|+||+|. .+. . .. +.....+|++
T Consensus 146 ~~~l~~~i~---~~~~lv~i~~-~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~~~-~-~~--~~~~~~~d~~ 212 (397)
T TIGR01976 146 PDDLASLLS---PRTRLVAVTA-ASNTLGSIVD----LAAITELVHAAGALVVVDAVHY-APH-G-LI--DVQATGADFL 212 (397)
T ss_pred HHHHHHhcC---CCceEEEEeC-CCCCCCccCC----HHHHHHHHHHcCCEEEEehhhh-ccc-c-CC--CHHHcCCCEE
Confidence 888988885 4678888888 8899998887 9999999999999999999985 321 1 11 2222346776
Q ss_pred e--eecccCCCccccEEEEEcHHHHHhhhccCC-------cccccccCCCCCCHHHHHHHHHHHHHHhhcC---------
Q psy14484 268 C--LSKGITGGYLPLSLVMTTDKIYNSIYYKNN-------INIFLHSHSYSGNPLACCAALATLEIFNKDN--------- 329 (430)
Q Consensus 268 ~--~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~-------~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~--------- 329 (430)
+ ++|.++ .++|++++++++++.+.+... ...+ ..+ +.+...+++..++++.+.+.+
T Consensus 213 ~~s~~K~~g---~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~-~~g--t~~~~~~~~l~~al~~~~~~g~~~~~~~~~ 286 (397)
T TIGR01976 213 TCSAYKFFG---PHMGILWGRPELLMNLPPYKLTFSYDTGPERF-ELG--TPQYELLAGVVAAVDYLAGLGESANGSRRE 286 (397)
T ss_pred EEechhhcC---CceEEEEEcHHHHhhCCCccccCccCCCcchh-cCC--CCCHHHHHHHHHHHHHHHHhCcccccchhh
Confidence 4 568763 479999999998776654100 0011 111 223344444555565543221
Q ss_pred --------HHHHHHHHHHHHHHHHHchhcCCCeee--EeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec--
Q psy14484 330 --------ILQRISQDMKKITKALTSLITHPKIIN--FRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-- 397 (430)
Q Consensus 330 --------~~~~~~~~~~~l~~~l~~l~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-- 397 (430)
..++..++.+++++.|+++.....+.. ....+.++.+... .. . +..+.++|.++||.+..+
T Consensus 287 ~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~---~~~l~~~L~~~gI~v~~~~~ 359 (397)
T TIGR01976 287 RLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVH-GL---P---PQRVVRRLADQGIDAWAGHF 359 (397)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeC-Cc---C---HHHHHHHHHHCCeEEEeCcc
Confidence 234445566777777765421111111 1124455555444 21 1 357899999999999754
Q ss_pred --------------CCEEEEeCCCCCCHHHHHHHHHHH
Q psy14484 398 --------------GNTVYLMPPYILNKNEIQHMTSAI 421 (430)
Q Consensus 398 --------------~~~lR~~~~~~~t~e~i~~~~~~l 421 (430)
++++|++++..+|++|++++++.|
T Consensus 360 ~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 360 YAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred chHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 257999999999999999999864
No 222
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.89 E-value=1.3e-20 Score=183.62 Aligned_cols=339 Identities=15% Similarity=0.144 Sum_probs=204.2
Q ss_pred CCEEEecccccccccCCCCCHHHHHHHHHHHhhcccccc-CC-----CCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHH
Q psy14484 33 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVML-SN-----LTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASA 106 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~-----~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA 106 (430)
+..|+|.. .+|..++.+.+++.+.+........ .. ......+++ +.+ +++++.+++|+|++|+|++
T Consensus 27 ~~iyld~~------a~g~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~g~~~~~v~~~~~~t~~ 98 (406)
T TIGR01814 27 AVIYLDGN------SLGLMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESL-LKL-RLVGAKEDEVVVMNTLTIN 98 (406)
T ss_pred CcEEecCC------CcCcCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhh-ccc-cccCCCCCcEEEeCCchHH
Confidence 34666632 2454578888999887765432211 01 112233333 335 7888888899999999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCe----eEeCCCCCCCCCCCCChhH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKT----YIITTPDSRNINKGNSANE 182 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 182 (430)
++.+++.+... + .+++.|++.+..| .+........ ......++ ..++.+.....
T Consensus 99 l~~~~~~~~~~----~-~~~~~i~~~~~~~-~s~~~~~~~~--------~~~~g~~~~~~~~~~~~~~~g~~-------- 156 (406)
T TIGR01814 99 LHLLLASFYKP----T-PKRYKILLEAKAF-PSDHYAIESQ--------LQLHGLTVEESMVQIEPREEETL-------- 156 (406)
T ss_pred HHHHHHHhcCC----c-CCccEEEecCCCC-ChHHHHHHHH--------HHhcCCCcccceEEeccCCCCcc--------
Confidence 99988875321 0 0123455444444 4321111100 00001111 12222211111
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCC
Q psy14484 183 IARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI 262 (430)
Q Consensus 183 ~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~ 262 (430)
+++++++.++..++++++|+++. +++++|.+.| +++|.++|+++|+++++|++|+ +|.. .+.+.. .
T Consensus 157 ----~~~~l~~~~~~~~~~t~lv~~~~-v~~~tG~~~~----~~~i~~~~~~~g~~~~vD~aq~-~G~~--~id~~~--~ 222 (406)
T TIGR01814 157 ----RLEDILDTIEKNGDDIAVILLSG-VQYYTGQLFD----MAAITRAAHAKGALVGFDLAHA-VGNV--PLDLHD--W 222 (406)
T ss_pred ----CHHHHHHHHHhcCCCeEEEEEec-cccccceecC----HHHHHHHHHHcCCEEEEEcccc-cCCc--cccccc--C
Confidence 67788888865556899999999 9999999998 9999999999999999999998 5433 223333 3
Q ss_pred CCceeeee--cccCCCccccEEEEEcHHHHHhhhcc--C---Cccc--ccccC----------CCCCCHHHHHHHHHHHH
Q psy14484 263 WPDFLCLS--KGITGGYLPLSLVMTTDKIYNSIYYK--N---NINI--FLHSH----------SYSGNPLACCAALATLE 323 (430)
Q Consensus 263 ~~d~~~~s--K~l~gG~~~ig~~~~~~~~~~~~~~~--~---~~~~--~~~~~----------t~~~~~~~~~aa~~~l~ 323 (430)
.+|++++| |.|.||. . |++++.++....+.+. + .... +.... .-+.+..++++..++|+
T Consensus 223 gvD~~~~s~hK~l~g~p-G-~~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~ 300 (406)
T TIGR01814 223 GVDFACWCTYKYLNAGP-G-AGAFVHEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLD 300 (406)
T ss_pred CCCEEEEcCccccCCCC-C-eEEEEehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHH
Confidence 46777655 9887762 4 5566655433223220 0 0000 00000 11245567777777888
Q ss_pred HHhh---cCHHHHHHHHHHHHHHHHHchhc-CCCee-----eEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEE
Q psy14484 324 IFNK---DNILQRISQDMKKITKALTSLIT-HPKII-----NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLL 394 (430)
Q Consensus 324 ~~~~---~~~~~~~~~~~~~l~~~l~~l~~-~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~ 394 (430)
++++ +...++.+++.+++++.|+++.. .+.+. ....++.++.+.+. .+ ...+.+.|.++||.+
T Consensus 301 ~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-~~-------~~~~~~~L~~~gi~v 372 (406)
T TIGR01814 301 IFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-VP-------GKAVFQALIKRGVIG 372 (406)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-CC-------HHHHHHHHHHCCEEE
Confidence 7754 44567778888888888766411 12221 11123445555443 11 357888999999988
Q ss_pred eecC-CEEEEeC-CCCCCHHHHHHHHHHHHHHH
Q psy14484 395 RPIG-NTVYLMP-PYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 395 ~~~~-~~lR~~~-~~~~t~e~i~~~~~~l~~~l 425 (430)
...+ +.+|+++ ++.+|++||++++++|++++
T Consensus 373 ~~~~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 373 DKREPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred eccCCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 7654 7899999 68999999999999998765
No 223
>PRK07908 hypothetical protein; Provisional
Probab=99.89 E-value=9.3e-21 Score=181.17 Aligned_cols=310 Identities=10% Similarity=0.091 Sum_probs=196.8
Q ss_pred CCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCC-HHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHH
Q psy14484 33 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTH-KPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVAL 111 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al 111 (430)
+..++||..| .++++ .++.+++++.+.+..... |+. ....++++.+++.++.++++|++|+|+++++..++
T Consensus 21 ~~~~~~l~~~--~~~~~-~~~~~~~~~~~~~~~~~~-----Y~~~~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~ 92 (349)
T PRK07908 21 GPGLLDFAVN--VRHDT-PPEWLRERLAARLGDLAA-----YPSTEDERRARAAVAARHGRTPDEVLLLAGAAEGFALLA 92 (349)
T ss_pred CCCeEEecCC--CCCCC-CCHHHHHHHHHHhhHhhc-----CCCccchHHHHHHHHHHhCcChhhEEECCCHHHHHHHHH
Confidence 5689999887 45555 578899999988755321 222 34557778888888888899999999999999887
Q ss_pred HHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHH
Q psy14484 112 KMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDL 191 (430)
Q Consensus 112 ~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 191 (430)
+ + . + +.+++..|+|..+...... .+ .+...++.+..+.. |+++
T Consensus 93 ~-l-~--------~-~~viv~~P~y~~~~~~~~~-~G------------~~i~~v~~~~~~~~------------d~~~- 135 (349)
T PRK07908 93 R-L-R--------P-RRAAVVHPSFTEPEAALRA-AG------------IPVHRVVLDPPFRL------------DPAA- 135 (349)
T ss_pred h-c-C--------C-CeEEEeCCCChHHHHHHHH-cC------------CEEEeeccCcccCc------------ChhH-
Confidence 7 2 2 3 4566778998766432222 11 12223333221111 4443
Q ss_pred HHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCcee---e
Q psy14484 192 EILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL---C 268 (430)
Q Consensus 192 e~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~---~ 268 (430)
+. .+++++++.. ++|++|...+ .++|.++|++ ++++|+||+|..+. .+.......... ++++ +
T Consensus 136 ---l~---~~~~~i~l~n-p~NPTG~~~~----~~~l~~l~~~-~~~iIvDe~y~~~~-~~~~~~l~~~~~-~~~i~i~S 201 (349)
T PRK07908 136 ---VP---DDADLVVIGN-PTNPTSVLHP----AEQLLALRRP-GRILVVDEAFADAV-PGEPESLAGDDL-PGVLVLRS 201 (349)
T ss_pred ---hc---cCCCEEEEcC-CCCCCCCCcC----HHHHHHHHhc-CCEEEEECcchhhc-cCCccccccccC-CCEEEEee
Confidence 22 3456666655 7889997776 5577778865 78899999998762 232211111111 2333 6
Q ss_pred eecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHH--Hh-hcCHHHHHHHHHHHHHHH
Q psy14484 269 LSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEI--FN-KDNILQRISQDMKKITKA 344 (430)
Q Consensus 269 ~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~--~~-~~~~~~~~~~~~~~l~~~ 344 (430)
|||.++ .| +|+|++++++++++.+.. ....+..+++...++.+.++. .+ -+...++++++.+++.+.
T Consensus 202 ~SK~~~l~G-lRiG~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~ 272 (349)
T PRK07908 202 LTKTWSLAG-LRVGYALGAPDVLARLTR--------GRAHWPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAG 272 (349)
T ss_pred cccccCCcc-ceeeeeecCHHHHHHHHh--------cCCCCCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHH
Confidence 899987 57 899999999999888765 112244455555444333320 00 122344555566666666
Q ss_pred HHchhcCCCeeeE-eecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-------CCEEEEeCCCCCCHHHHHH
Q psy14484 345 LTSLITHPKIINF-RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-------GNTVYLMPPYILNKNEIQH 416 (430)
Q Consensus 345 l~~l~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-------~~~lR~~~~~~~t~e~i~~ 416 (430)
|+++ . +... +..|.++++.+. + ...+.+.|.++||.+.++ .+++|++++ +++++++
T Consensus 273 L~~~---~-~~~~~p~~g~~~~~~~~-~--------~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~---~~~~~~~ 336 (349)
T PRK07908 273 LRAV---G-ARVVDPAAAPFVLVRVP-D--------AELLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR---PRAEVPV 336 (349)
T ss_pred HHhC---C-cEeccCCCceEEEEECC-c--------HHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC---CCccHHH
Confidence 6543 2 2222 245777777665 3 256888899999999874 268999874 8889999
Q ss_pred HHHHHHHHHH
Q psy14484 417 MTSAIFQTFN 426 (430)
Q Consensus 417 ~~~~l~~~l~ 426 (430)
++++|++++.
T Consensus 337 l~~al~~~~~ 346 (349)
T PRK07908 337 LVQALAEILK 346 (349)
T ss_pred HHHHHHHHHh
Confidence 9999988765
No 224
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.89 E-value=7.7e-21 Score=184.57 Aligned_cols=303 Identities=16% Similarity=0.114 Sum_probs=202.9
Q ss_pred CHHHHHHHHHHHhhcCCCC-CeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchh
Q psy14484 76 HKPVIKLSEKLSSLTQYKL-GHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKE 154 (430)
Q Consensus 76 ~~~~~~l~~~l~~~~~~~~-~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~ 154 (430)
.+..+++++.++++++.+. +.+++++||+++++.++..... ++++|++.+++|++.....
T Consensus 41 ~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~--------~Gd~Vlv~~~~~~~~~~~~----------- 101 (401)
T PLN02409 41 PALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLS--------PGDKVVSFRIGQFSLLWID----------- 101 (401)
T ss_pred HHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCC--------CCCEEEEeCCCchhHHHHH-----------
Confidence 3567788888999987654 4689999999999998876643 6678998887776542111
Q ss_pred hhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCC-CCeEEEEEccccccCCCcccCChHHHHHHHHH--
Q psy14484 155 IYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNH-NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI-- 231 (430)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l-- 231 (430)
.......+...++.+..... |++++++.+++.+ +++++|++.. +.+++|.+.| +++|.++
T Consensus 102 ~~~~~g~~v~~v~~~~~~~~------------~~~~l~~~l~~~~~~~~k~v~~~~-~~~~tG~~~~----~~~i~~l~~ 164 (401)
T PLN02409 102 QMQRLNFDVDVVESPWGQGA------------DLDILKSKLRQDTNHKIKAVCVVH-NETSTGVTND----LAGVRKLLD 164 (401)
T ss_pred HHHHcCCceEEEECCCCCCC------------CHHHHHHHHhhCcCCCccEEEEEe-ecccccccCC----HHHHHHHHh
Confidence 01112234445554422111 7889999997521 3688888888 8888998887 8888888
Q ss_pred HHhcCCEEEEeccccCCCCcccccccccCCCCCceee--eecccCCCccccEEEEEcHHHHHhhhccCCccccc------
Q psy14484 232 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFL------ 303 (430)
Q Consensus 232 ~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~--~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~------ 303 (430)
|+++|+++|+|++|+ ++.. .++...+..|+++ .+|++++. .++|+++.++++++.+... ...+..
T Consensus 165 ~~~~g~~~vvD~v~s-~g~~----~id~~~~~~D~~~~s~~K~l~~P-~G~G~l~~~~~~~~~~~~~-~~~~~~~~~~~~ 237 (401)
T PLN02409 165 CAQHPALLLVDGVSS-IGAL----DFRMDEWGVDVALTGSQKALSLP-TGLGIVCASPKALEASKTA-KSPRVFFDWADY 237 (401)
T ss_pred hhccCcEEEEEcccc-cCCc----cccccccCccEEEEcCccccCcC-CCcceeEECHHHHHHHhcC-CCCCeecCHHHH
Confidence 999999999999987 5321 1222233457765 45999875 4699999999987776531 001100
Q ss_pred ----ccC---CCCCCHHHHHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHHHchhcCCCeee--EeecceEEEEEEeec
Q psy14484 304 ----HSH---SYSGNPLACCAALATLEIFNK---DNILQRISQDMKKITKALTSLITHPKIIN--FRQKGMIWAFDVIIE 371 (430)
Q Consensus 304 ----~~~---t~~~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~l~~~~~~~~--~~~~g~~~~~~~~~~ 371 (430)
..+ .++++...+.+..++++.+.+ ++..++.+++.+++++.|+++ ....+.. ....+.+.++.++ .
T Consensus 238 ~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~~~~~~~~~~s~~v~~~~~p-~ 315 (401)
T PLN02409 238 LKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW-GLKLCTKKPEWRSDTVTAVVVP-E 315 (401)
T ss_pred HHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhhcccceEEEeCC-C
Confidence 111 234555667777788886643 455677888888888888765 2222221 1112344455544 3
Q ss_pred CCccchhHHHHHHHHHH-HCCcEEeec-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 372 DPEQIETFSKKFFVAAL-KNELLLRPI-----GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 372 ~~~~~~~~a~~~~~~l~-~~Gv~~~~~-----~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+.. +.++.+.|. +.|+.+..+ +..+|++.+..++++++..++++|++++.++
T Consensus 316 ~~~-----~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~ 373 (401)
T PLN02409 316 GID-----SAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDV 373 (401)
T ss_pred CCC-----HHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 211 246776664 569998854 5789999999999999999999999998763
No 225
>PRK10534 L-threonine aldolase; Provisional
Probab=99.89 E-value=2.4e-21 Score=184.20 Aligned_cols=320 Identities=15% Similarity=0.138 Sum_probs=197.2
Q ss_pred EEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHH
Q psy14484 36 YLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSF 115 (430)
Q Consensus 36 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~ 115 (430)
.+||.++. ++. .+|.+++++.+...... .+++.+...+|++.+++.+ +.+.+++++||++++..++.+.+
T Consensus 1 ~~~~~~~~--~~~--p~~~~~~a~~~~~~~~~----~Y~~~~~~~~L~~~la~~~--g~~~~~v~~~g~~a~~~~l~~~~ 70 (333)
T PRK10534 1 MIDLRSDT--VTR--PSRAMLEAMMAAPVGDD----VYGDDPTVNALQDYAAELS--GKEAALFLPTGTQANLVALLSHC 70 (333)
T ss_pred Cccccccc--CCC--CCHHHHHHHHhccCCCc----ccCCCHHHHHHHHHHHHHh--CCCeEEEeCchHHHHHHHHHHhc
Confidence 37888883 333 78999999877543321 1336788899999999998 45566899999999988887654
Q ss_pred HhhhhcCCCCCcEEEEEcCCCCC-cchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHH
Q psy14484 116 HYWYNKGFLNKKKFICLQNSYHG-ETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEIL 194 (430)
Q Consensus 116 ~~~~~~g~~~~~~vl~~~~~yhg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~ 194 (430)
. +++.|++..++|.. +........+ ......++...++.. |+++|+++
T Consensus 71 ~--------~gd~vi~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~------------d~~~l~~~ 119 (333)
T PRK10534 71 E--------RGEEYIVGQAAHNYLYEAGGAAVLG-----------SIQPQPIDAAADGTL------------PLDKVAAK 119 (333)
T ss_pred C--------CCCeeEEechhhhhHhcCCchHHhc-----------CceEEeecCCCCCCC------------CHHHHHHh
Confidence 3 45667766555531 1110000000 011122322222222 78999888
Q ss_pred HHhCC---CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCc---ccccccccCCCCCc--e
Q psy14484 195 LKKNH---NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRT---GKFFACEHAEIWPD--F 266 (430)
Q Consensus 195 l~~~~---~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~---g~~~~~~~~~~~~d--~ 266 (430)
+.++. .++++|+++. ++ +| ...+.+.+++|.++|++|++++++||+|. |+.. +... ......+| +
T Consensus 120 i~~~~~~~~~~~lv~l~n-p~--~G-~v~~~~~l~~i~~~~~~~~~~lvvDEA~~-~~~~~~~~~~~--~~~~~~~~~~~ 192 (333)
T PRK10534 120 IKPDDIHFARTRLLSLEN-TH--NG-KVLPREYLKQAWEFTRERNLALHVDGARI-FNAVVAYGCEL--KEITQYCDSFT 192 (333)
T ss_pred hcccCcCcccceEEEEec-CC--CC-eecCHHHHHHHHHHHHHcCCeEEeeHHHH-HHHHHHcCCCH--HHHHhcCCEEE
Confidence 85310 1355555543 33 36 44567778999999999999999999976 4211 1111 00011123 4
Q ss_pred eeeecccCCCccccE-EEEEcHHHHHhhhccCCcccccccC--CCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Q psy14484 267 LCLSKGITGGYLPLS-LVMTTDKIYNSIYYKNNINIFLHSH--SYSGNPLACCAALATLEIFNKDNILQRISQDMKKITK 343 (430)
Q Consensus 267 ~~~sK~l~gG~~~ig-~~~~~~~~~~~~~~~~~~~~~~~~~--t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~ 343 (430)
++|||+++ .++| ++++++++++.+.. +.... .+..+.++++++.++|+.. ....++..+.++++.+
T Consensus 193 ~s~SK~~~---~~~G~~~~~~~~~i~~~~~------~~~~~~~~~~~~~~~~a~~~~~l~~~--~~~~~~~~~~r~~l~~ 261 (333)
T PRK10534 193 ICLSKGLG---TPVGSLLVGNRDYIKRARR------WRKMTGGGMRQAGILAAAGLYALKHN--VARLQEDHDNAAWLAE 261 (333)
T ss_pred EEeEcCCC---CcccceEEcCHHHHHHHHH------HHHHhCCchhhHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHH
Confidence 58999776 3578 57789999887764 11111 1222334555566666421 2333444445667778
Q ss_pred HHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecCCEEEEeCCCCCCHHHHHHHHHHHHH
Q psy14484 344 ALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQ 423 (430)
Q Consensus 344 ~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~ 423 (430)
.|+++ ... ..++.+.|+.+.+. +. . +.++.+.|+++||.+.++. .+|+..+..+|++++++++++|++
T Consensus 262 ~L~~~-g~~---~~~~~~nfv~~~~~-~~----~--~~~~~~~l~~~gi~v~~~~-~~rl~~~~r~t~e~~~~~~~~l~~ 329 (333)
T PRK10534 262 QLREA-GAD---VMRQDTNMLFVRVG-EE----Q--AAALGEYMRERNVLINASP-IVRLVTHLDVSREQLAEVVAHWRA 329 (333)
T ss_pred HHHhC-CCc---cCCCCceEEEEECC-ch----h--HHHHHHHHHHcCeeecCCc-eEEEEEEeCCCHHHHHHHHHHHHH
Confidence 77765 222 22346777776654 21 1 3578889999999998764 578887777899999999999987
Q ss_pred HHH
Q psy14484 424 TFN 426 (430)
Q Consensus 424 ~l~ 426 (430)
.+.
T Consensus 330 ~~~ 332 (333)
T PRK10534 330 FLA 332 (333)
T ss_pred Hhc
Confidence 654
No 226
>KOG0259|consensus
Probab=99.89 E-value=1.6e-20 Score=168.55 Aligned_cols=318 Identities=16% Similarity=0.153 Sum_probs=205.4
Q ss_pred HHHHHHHHHHHhhcc--ccccCCCCCHHHHHHHHHHHhhcC--CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcE
Q psy14484 53 SYINKALKNQLNKLE--HVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKK 128 (430)
Q Consensus 53 p~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~ 128 (430)
++..+|+.+++..+. .+.+..+....+++.++.+.+.++ ...+.|++|+|.++|++.++..+.. ++..
T Consensus 81 ~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~--------p~aN 152 (447)
T KOG0259|consen 81 QEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLAN--------PGAN 152 (447)
T ss_pred HHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcC--------CCCc
Confidence 478889988887542 222233444666788888777665 3567999999999999999998765 7788
Q ss_pred EEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeC-CCC-CCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEE
Q psy14484 129 FICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIIT-TPD-SRNINKGNSANEIARCAIFDLEILLKKNHNKIAAII 206 (430)
Q Consensus 129 vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi 206 (430)
|+.+.|+|.-+...+....- +++... .|+ +++. |++.+|.++++ ++++.++
T Consensus 153 ILlPrPGfp~Y~~~a~~~~l-------------EVR~ydlLPe~~weI------------DL~~veal~DE--NT~Aivv 205 (447)
T KOG0259|consen 153 ILLPRPGFPLYDTRAIYSGL-------------EVRYYDLLPEKDWEI------------DLDGVEALADE--NTVAIVV 205 (447)
T ss_pred eecCCCCCchHHHhhhhcCc-------------eeEeecccCccccee------------chHHHHHhhcc--CeeEEEE
Confidence 99999999876443332111 111111 222 1222 99999999973 3455555
Q ss_pred EccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccc-cc-cCCCCCcee--eeeccc-CCCccccE
Q psy14484 207 IEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA-CE-HAEIWPDFL--CLSKGI-TGGYLPLS 281 (430)
Q Consensus 207 ~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~-~~-~~~~~~d~~--~~sK~l-~gG~~~ig 281 (430)
++| +|+-| .+++.+-|++|.++|+++|+++|.||||..+.+-+..|. .. ...+.|-+. .+||.. -.| ||+|
T Consensus 206 iNP--~NPcG-nVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPG-WRlG 281 (447)
T KOG0259|consen 206 INP--NNPCG-NVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPG-WRLG 281 (447)
T ss_pred eCC--CCCCc-ccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCC-ceee
Confidence 565 44444 678899999999999999999999999987755555432 22 233456544 467864 447 8999
Q ss_pred EEEEcHH--------HHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHH----HHHHHHHHHHHHHHHchh
Q psy14484 282 LVMTTDK--------IYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNIL----QRISQDMKKITKALTSLI 349 (430)
Q Consensus 282 ~~~~~~~--------~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~----~~~~~~~~~l~~~l~~l~ 349 (430)
|++.... ..+.+.. + ..-+.+++.+.++|.-..|+.- .+++. .-++.+.+.-.++|+++
T Consensus 282 Wi~~hD~~gvf~~~~~~q~~~~------~-~~~~~~p~TiiQ~AlP~IL~kT-p~efF~k~~~~lk~na~l~y~~Lk~I- 352 (447)
T KOG0259|consen 282 WIALHDPRGVFRDTKVVQGIKN------F-LDIIPGPATIIQGALPDILEKT-PEEFFDKKLSFLKSNADLCYSRLKDI- 352 (447)
T ss_pred eEEEecccccccchHHHHHHHH------H-HhccCCccHhHHHHhHHHHHhC-hHHHHHHHHHHHHhhHHHHHHHHhcC-
Confidence 9987542 2223322 1 1223344555555554555421 13343 33466666667777765
Q ss_pred cCCCee-eEeecceEEEEEEeec-----CCccchhHHHHHHHHHH-HCCcEEeec-----CCEEEEeCCCCCCHHHHHHH
Q psy14484 350 THPKII-NFRQKGMIWAFDVIIE-----DPEQIETFSKKFFVAAL-KNELLLRPI-----GNTVYLMPPYILNKNEIQHM 417 (430)
Q Consensus 350 ~~~~~~-~~~~~g~~~~~~~~~~-----~~~~~~~~a~~~~~~l~-~~Gv~~~~~-----~~~lR~~~~~~~t~e~i~~~ 417 (430)
|++. .++++|.++.+.-. + +...+ ..|++.|. |+.+++-|+ .+++|++ .+...+.++++
T Consensus 353 --P~l~cp~kPeg~mylmv~l-~~s~~~~~~dD----~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~--i~~~~~~leea 423 (447)
T KOG0259|consen 353 --PCLTCPVKPEGCMYLMVKL-NLSLFPDIEDD----VDFCQKLAREESVICLPGQAFGLKNWLRIV--ITVEEEMLEEA 423 (447)
T ss_pred --CCcccCcCCCcceEEEecc-chhhhcccccc----HHHHHHHhhhcceEEeccccccCCCeEEEE--EccChHHHHHH
Confidence 6655 66788888766432 1 11111 45777764 668888886 4899994 55788889999
Q ss_pred HHHHHHHHHH
Q psy14484 418 TSAIFQTFNE 427 (430)
Q Consensus 418 ~~~l~~~l~~ 427 (430)
.+||++...+
T Consensus 424 ~~Rik~Fc~R 433 (447)
T KOG0259|consen 424 FSRIKEFCDR 433 (447)
T ss_pred HHHHHHHHHh
Confidence 9999987653
No 227
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.89 E-value=2.8e-20 Score=180.12 Aligned_cols=335 Identities=13% Similarity=0.078 Sum_probs=202.8
Q ss_pred EEecccccccccCCCCCHHHHHHHHHHHhhccccc--cCCCCCHHHHHHH---HHHHhhcCC-CCCeEEEcCCchHHHHH
Q psy14484 36 YLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVM--LSNLTHKPVIKLS---EKLSSLTQY-KLGHCFYGSDGASAVEV 109 (430)
Q Consensus 36 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~--~~~~~~~~~~~l~---~~l~~~~~~-~~~~v~~~~sgteA~~~ 109 (430)
|+|..++. ..++.|.+++.+.+....... ...+.......++ +.+.+.+++ ++++|+||+|++|++..
T Consensus 2 yld~aa~~------~~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~ 75 (382)
T TIGR03403 2 YLDNNATT------MLDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNW 75 (382)
T ss_pred cccCcCCC------CCCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHH
Confidence 66755542 257899999999887532111 1112222223333 334444443 56899999999999999
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHH
Q psy14484 110 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIF 189 (430)
Q Consensus 110 al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 189 (430)
+++.+...... +++++.|++....++........ ......++..++.+.+... |++
T Consensus 76 ~~~~~~~~~~~--~~~~~~vi~~~~e~ps~~~~~~~----------~~~~G~~v~~v~~~~~g~~------------d~~ 131 (382)
T TIGR03403 76 VLKGVYFDEIL--KGGKNHIITTEVEHPAVRATCAF----------LESLGVEVTYLPINEQGTI------------TAE 131 (382)
T ss_pred HHHHHHHhhcc--cCCCCEEEEcCCccHHHHHHHHH----------HHHCCCEEEEEecCCCCCC------------CHH
Confidence 98866320000 01345677655444333211110 0111233445554432222 788
Q ss_pred HHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeee
Q psy14484 190 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCL 269 (430)
Q Consensus 190 ~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~ 269 (430)
++++.++ ++++++++.. ++|++|...+ +++|.++|+++|+++|+|++|+ ++.. .++.....+|++++
T Consensus 132 ~l~~~i~---~~t~lv~~~~-~~n~tG~~~~----~~~I~~la~~~g~~~ivD~a~~-~g~~----~~~~~~~~~D~~~~ 198 (382)
T TIGR03403 132 QVREAIT---EKTALVSVMW-ANNETGMIFP----IKEIGEICKERGVLFHTDAVQA-IGKI----PVDVQKAGVDFLSF 198 (382)
T ss_pred HHHHhcc---cCCeEEEEEc-ccCCCccccC----HHHHHHHHHHcCCEEEEechhh-cCCC----ccCccccCCCEEEE
Confidence 8988885 4567888888 8999998888 8999999999999999999986 4322 12222345788887
Q ss_pred e--cccCCCccccEEEEEcHHHH--HhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh--cCHHHHHHHHHHHHHH
Q psy14484 270 S--KGITGGYLPLSLVMTTDKIY--NSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDMKKITK 343 (430)
Q Consensus 270 s--K~l~gG~~~ig~~~~~~~~~--~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~--~~~~~~~~~~~~~l~~ 343 (430)
| |.++. ..+|+++++++.. ..+........ ....+.+..++.++.++++...+ +...++++++.+++.+
T Consensus 199 s~~K~~gp--~G~g~l~vr~~~~~~p~~~g~~~~~~---~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~ 273 (382)
T TIGR03403 199 SAHKFHGP--KGVGGLYIRKGVELTPLFHGGEHMGG---RRSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLED 273 (382)
T ss_pred cchhhCCC--CceEEEEECCCCCCCCcccCCCCCCC---cccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 7 95432 2478888887641 11100000000 11234566677667777765543 2334566777777777
Q ss_pred HHHchhcCCCeeeEe----ecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec----------------------
Q psy14484 344 ALTSLITHPKIINFR----QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI---------------------- 397 (430)
Q Consensus 344 ~l~~l~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~---------------------- 397 (430)
.|+++ +.+.... ..+.++.+.+. . . . ...+.+.|.++||.++.+
T Consensus 274 ~L~~~---~~~~~~~~~~~~~~~~~~~~~~-~-~---~--~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~ 343 (382)
T TIGR03403 274 ALLEL---PDVFVVGDREHRVPNTILISIK-G-V---E--GEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKE 343 (382)
T ss_pred HHhcC---CCEEEECCCCCCcCCEEEEEeC-C-C---C--HHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChH
Confidence 77654 3332221 11345555554 2 1 1 246777788999999842
Q ss_pred --CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 398 --GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 398 --~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
++.+|++++..+|++||++++++|+++++++
T Consensus 344 ~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~ 376 (382)
T TIGR03403 344 LAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRL 376 (382)
T ss_pred HhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 1469999999999999999999999988764
No 228
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.89 E-value=2.3e-20 Score=180.07 Aligned_cols=320 Identities=14% Similarity=0.157 Sum_probs=214.9
Q ss_pred CCCCCHHHHHHHHHHHhhccccc---cCCC---CCHHHHHHHHHHHhhcCCCC-CeEEEcCCchHHHHHHHHHHHHhhhh
Q psy14484 48 FGHSNSYINKALKNQLNKLEHVM---LSNL---THKPVIKLSEKLSSLTQYKL-GHCFYGSDGASAVEVALKMSFHYWYN 120 (430)
Q Consensus 48 lG~~~p~v~~a~~~~~~~~~~~~---~~~~---~~~~~~~l~~~l~~~~~~~~-~~v~~~~sgteA~~~al~~~~~~~~~ 120 (430)
.|..++.|.+++.+.+.+..... .... ..+..+++++.++++++++. ++|+|++|++++++.++..+....
T Consensus 8 ~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~-- 85 (371)
T PF00266_consen 8 TGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPL-- 85 (371)
T ss_dssp S-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHG--
T ss_pred ccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhcccccc--
Confidence 34568899999999887643221 1111 12556788899999999888 789999999999999999885311
Q ss_pred cCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCC
Q psy14484 121 KGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHN 200 (430)
Q Consensus 121 ~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 200 (430)
.++++|++....|++......... .....++..++.+..... |++++++.+. +
T Consensus 86 ---~~g~~vl~~~~~~~s~~~~~~~~~---------~~~g~~v~~i~~~~~~~~------------~~~~~~~~l~---~ 138 (371)
T PF00266_consen 86 ---KPGDEVLVTSNEHPSNRYPWEEIA---------KRKGAEVRVIPADPGGSL------------DLEDLEEALN---P 138 (371)
T ss_dssp ---TTTCEEEEEESSHHHHHHHHHHHH---------HHTTEEEEEEEEGTTSSC------------SHHHHHHHHH---T
T ss_pred ---cccccccccccccccccccccccc---------ccchhhhccccccccchh------------hhhhhhhhhc---c
Confidence 166788888877776531111110 011123344444332222 7899999996 6
Q ss_pred CeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeee--cccCCCcc
Q psy14484 201 KIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITGGYL 278 (430)
Q Consensus 201 ~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s--K~l~gG~~ 278 (430)
++.+|++.. +.+.+|...| +++|.++|+++|+++++|.+|+ +|.. .++.....+|++++| | ++|+ .
T Consensus 139 ~~~lv~~~~-~~~~tG~~~p----i~~I~~~~~~~~~~~~vD~~~~-~g~~----~id~~~~~~D~~~~s~~K-l~gp-~ 206 (371)
T PF00266_consen 139 DTRLVSISH-VENSTGVRNP----IEEIAKLAHEYGALLVVDAAQS-AGCV----PIDLDELGADFLVFSSHK-LGGP-P 206 (371)
T ss_dssp TESEEEEES-BETTTTBBSS----HHHHHHHHHHTTSEEEEE-TTT-TTTS----S--TTTTTESEEEEESTS-TTSS-S
T ss_pred ccceEEeec-ccccccEEee----eceehhhhhccCCceeEechhc-cccc----cccccccccceeeecccc-cCCC-C
Confidence 889999999 9999999988 9999999999999999999987 5443 133334567989887 8 8776 4
Q ss_pred ccEEEEEcHHHHHhhhccCCccc----------------c-cccCCCCCCHHHHHHHHHHHHHHhh---cCHHHHHHHHH
Q psy14484 279 PLSLVMTTDKIYNSIYYKNNINI----------------F-LHSHSYSGNPLACCAALATLEIFNK---DNILQRISQDM 338 (430)
Q Consensus 279 ~ig~~~~~~~~~~~~~~~~~~~~----------------~-~~~~t~~~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~ 338 (430)
.+|+++++++..+.+.+...... . ...+ +.+.....+..++++.+++ +.+.++..++.
T Consensus 207 G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~G--T~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~ 284 (371)
T PF00266_consen 207 GLGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGG--TPNVPAIYALNEALKLLEEIGIERIRERIRELA 284 (371)
T ss_dssp TEEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSS--S--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhheehhhhhhccccccccccccccccchhccccccccccccc--ceeeehhhhHHHHHhhhhccccccchhhhhhHH
Confidence 69999999998887754100000 0 0011 2355555666677776643 45667788888
Q ss_pred HHHHHHHHchhcCCCe--eeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-------------CCEEEE
Q psy14484 339 KKITKALTSLITHPKI--INFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-------------GNTVYL 403 (430)
Q Consensus 339 ~~l~~~l~~l~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-------------~~~lR~ 403 (430)
+++.+.|+++.....+ .....++.++.+.+. .. . ...+.+.|.++||.+..+ ++.+|+
T Consensus 285 ~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~-~~----~--~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRv 357 (371)
T PF00266_consen 285 EYLREALEELPGIEVLGPDDEPRRPSIVSFNLP-GS----D--ADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRV 357 (371)
T ss_dssp HHHHHHHHHTTTEEESSSSCGGBGTTEEEEEET-TS----S--HHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEE
T ss_pred HHHHhhhhcCCceeEeeecccccccceEEEeec-CC----C--HHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEE
Confidence 8888888776221111 123445677777776 31 1 367889999999999873 279999
Q ss_pred eCCCCCCHHHHHHH
Q psy14484 404 MPPYILNKNEIQHM 417 (430)
Q Consensus 404 ~~~~~~t~e~i~~~ 417 (430)
+++..+|++||+++
T Consensus 358 S~~~~nt~~dv~~l 371 (371)
T PF00266_consen 358 SLHYYNTEEDVDRL 371 (371)
T ss_dssp E-GTTSSHHHHHHH
T ss_pred eccCCCCHHHHhhC
Confidence 99999999999875
No 229
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.89 E-value=2.5e-20 Score=181.51 Aligned_cols=336 Identities=11% Similarity=0.080 Sum_probs=203.8
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCC------CCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSN------LTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAV 107 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~------~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~ 107 (430)
+.|+|..+. +.-++.|.+++.+.+.......... ...+..+++++.+++.++.++++|+|++|+++++
T Consensus 4 ~~yld~aa~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~ 77 (402)
T TIGR02006 4 PIYLDYAAT------TPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESN 77 (402)
T ss_pred cEEeeCCcC------CCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHH
Confidence 468887654 2358999999988875432111100 1123456778889999987888999999999999
Q ss_pred HHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHH
Q psy14484 108 EVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCA 187 (430)
Q Consensus 108 ~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 187 (430)
+.+++.+..... ++++.|++.... |.......... .....++..++.+.+... |
T Consensus 78 ~~~l~~l~~~~~----~~g~~Vi~~~~~-h~s~~~~~~~~---------~~~g~~v~~v~~~~~~~~------------d 131 (402)
T TIGR02006 78 NLAIKGIAHFYK----SKGNHIITSKTE-HKAVLDTCRYL---------EREGFEVTYLPPKSNGLI------------D 131 (402)
T ss_pred HHHHHHHHHhhc----CCCCEEEECCCc-cHHHHHHHHHH---------HhcCCEEEEEccCCCCcC------------C
Confidence 999887653210 144566665544 44322221100 011123344544432222 7
Q ss_pred HHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCcee
Q psy14484 188 IFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL 267 (430)
Q Consensus 188 ~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~ 267 (430)
++++++.+. ++++++++.. +++++|...| +++|.++|+++|+++|+|++|+ +|.. .++..+..+|++
T Consensus 132 ~~~l~~~l~---~~~~lv~v~~-~~n~tG~~~~----~~~I~~l~~~~g~~livD~a~a-~g~~----~~~~~~~~~D~~ 198 (402)
T TIGR02006 132 LEELKAAIR---DDTILVSIMH-VNNEIGVIQD----IAAIGEICRERKVFFHVDAAQS-VGKI----PINVNELKVDLM 198 (402)
T ss_pred HHHHHHhcC---CCCEEEEEEC-CCcCceeccc----HHHHHHHHHHcCCEEEEEcchh-cCCc----ccCccccCCCEE
Confidence 889988885 4578888888 9999998887 9999999999999999999997 5432 122334568999
Q ss_pred eee--cccCCCccccEEEEEcHHHHHhhhcc--C--CcccccccCCCCCCHHHHHHHHHHHHHHhh--cCHHHHHHHHHH
Q psy14484 268 CLS--KGITGGYLPLSLVMTTDKIYNSIYYK--N--NINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDMK 339 (430)
Q Consensus 268 ~~s--K~l~gG~~~ig~~~~~~~~~~~~~~~--~--~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~--~~~~~~~~~~~~ 339 (430)
++| |.++. ..+|+++++++....+.+. + ..+.+ .. .+.+...+.+..++++.++. +...++.+++.+
T Consensus 199 ~~s~~K~~gp--~G~G~l~~~~~~~~~~~~~~~g~~~~~~~-~~--gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~ 273 (402)
T TIGR02006 199 SISGHKIYGP--KGIGALYVRRKPRVRLEALIHGGGHERGM-RS--GTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRD 273 (402)
T ss_pred EEehhhhcCC--CceEEEEEccCCCCCCCceecCCCccCCc-cC--CCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 998 96543 3589999987644333220 0 00111 11 12344555555567776543 334466777777
Q ss_pred HHHHHHHchhcCCCeeeEee-cceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEee----------------------
Q psy14484 340 KITKALTSLITHPKIINFRQ-KGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP---------------------- 396 (430)
Q Consensus 340 ~l~~~l~~l~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~---------------------- 396 (430)
++++.|+++........... ....+.+.+. .- . .+.+...+ +++.++.
T Consensus 274 ~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~-~~---~---~~~~~~~l--~~i~v~~G~~c~~~~~~~~~~l~~lg~~~ 344 (402)
T TIGR02006 274 RLLNGIKSIEEVYLNGDLEHRVPGNLNVSFN-YV---E---GESLIMAL--KDLAVSSGSACTSASLEPSYVLRALGIND 344 (402)
T ss_pred HHHHHHhcCCCEEEeCCccccCCCeEEEEEe-Cc---C---HHHHHHhc--CCEEEechhhcCCCCCCccHHHHHcCCCh
Confidence 88877766522111111111 1111123333 11 0 12343333 2443321
Q ss_pred --cCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 397 --IGNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 397 --~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
..+.+|++++..+|++||+++++.|+++++++
T Consensus 345 ~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~ 378 (402)
T TIGR02006 345 ELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKL 378 (402)
T ss_pred hhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 13689999999999999999999999987653
No 230
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.89 E-value=3.1e-20 Score=181.25 Aligned_cols=345 Identities=10% Similarity=0.007 Sum_probs=201.0
Q ss_pred CCEEEecccccccccCCCCCHHHHHHHHHHHhhcc------ccccCCCCCHHHHHHHHHHHhhc--CCCCCeEEEcCCch
Q psy14484 33 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLE------HVMLSNLTHKPVIKLSEKLSSLT--QYKLGHCFYGSDGA 104 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~------~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~v~~~~sgt 104 (430)
+..++|+..| ...++ .+|.+.+++.+.+.... .+....+..++++.+++.+.+.. +.++++|++|+|+.
T Consensus 33 ~~~~i~l~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~ 109 (409)
T PRK07590 33 EAKIIRLGIG--DVTQP-LPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAK 109 (409)
T ss_pred CCceEEecCc--CCCCC-CCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHH
Confidence 5578898777 34454 46888999998876531 11112223345556666554433 46788999999999
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHH
Q psy14484 105 SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA 184 (430)
Q Consensus 105 eA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (430)
+++...+.+ +. +++.|++.+|+|.++.......+.... ..... ...+...++.......
T Consensus 110 ~al~~l~~~-~~--------~gd~V~v~~P~Y~~~~~~~~~~g~~~~-~~~~~-~~~~~~~v~~~~~~~~---------- 168 (409)
T PRK07590 110 CDTGNILDI-FG--------PDNTIAVTDPVYPVYVDTNVMAGRTGE-ANEDG-RYSGIVYLPCTAENNF---------- 168 (409)
T ss_pred HHHHHHHHh-cC--------CCCEEEEeCCCCcchHHHHHHcCCccc-ccccc-cccceeEeecccccCC----------
Confidence 999875432 22 668899999999987544443332100 00000 0001223332210000
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccc-ccc-ccCCC
Q psy14484 185 RCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FAC-EHAEI 262 (430)
Q Consensus 185 ~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~-~~~-~~~~~ 262 (430)
.++ +. ..+++++++.. ++|++| ...+.+.+++|.++|++|++++|.||+|..|...+.. -.. ...+.
T Consensus 169 --~~d-----~~--~~~~k~i~l~n-P~NPTG-~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~ 237 (409)
T PRK07590 169 --VPE-----LP--EEKVDIIYLCF-PNNPTG-TVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGA 237 (409)
T ss_pred --ccc-----Cc--ccCceEEEEeC-CCCCcC-CcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCc
Confidence 011 11 13456666555 778888 5678888999999999999999999999977543321 111 11111
Q ss_pred ---CCceeeeecccC-CCccccEEEEEcHHHHHhhhccC-----CcccccccCCC-CCCHHHHHHHHHHHHH-Hh--hcC
Q psy14484 263 ---WPDFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKN-----NINIFLHSHSY-SGNPLACCAALATLEI-FN--KDN 329 (430)
Q Consensus 263 ---~~d~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~-----~~~~~~~~~t~-~~~~~~~~aa~~~l~~-~~--~~~ 329 (430)
...+-+|||.++ .| +|+|++++++++++.+.... .........++ +.+.+++.++.++++. .. -..
T Consensus 238 ~~~vi~~~SfSK~~~~pG-lRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~ 316 (409)
T PRK07590 238 RECAIEFRSFSKTAGFTG-TRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKE 316 (409)
T ss_pred ccceEEEecCccccCCcC-ceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHH
Confidence 112337999997 57 89999999998876321000 00000112222 3566777766666641 00 112
Q ss_pred HHHHHHHHHHHHHHHHHchhcCCCeeeEeec-ceEEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec-------CCE
Q psy14484 330 ILQRISQDMKKITKALTSLITHPKIINFRQK-GMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------GNT 400 (430)
Q Consensus 330 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~-------~~~ 400 (430)
..+.++++.+.+.+.|+.. + +....+. |.++++.+. ... . +.++++.++ +.||.+.|+ .++
T Consensus 317 ~~~~~~~~r~~l~~~L~~~---~-~~~~~~~g~~f~wi~~~-~~~--~---~~~~~~~l~~~~gv~v~pg~~f~~~~~~~ 386 (409)
T PRK07590 317 LIDYYMENAKIIREGLESA---G-FEVYGGVNAPYIWVKTP-DGM--S---SWDFFDKLLQEANVVGTPGSGFGPSGEGY 386 (409)
T ss_pred HHHHHHHHHHHHHHHHHhc---C-CceecCCcceEEEEECC-CCC--C---HHHHHHHHHHHCCEEEeChhHhCCCCCCE
Confidence 3444555555666666543 2 2223343 556677665 321 1 256777776 569999875 257
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 401 VYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 401 lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
+|++. ..+++++++++++|.+++
T Consensus 387 iRi~~--~~~~~~l~~~l~rl~~~~ 409 (409)
T PRK07590 387 FRLSA--FGSRENVLEAMERIKKAL 409 (409)
T ss_pred EEEEc--cCCHHHHHHHHHHHHhhC
Confidence 89973 468999999999998753
No 231
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.88 E-value=6.9e-20 Score=177.03 Aligned_cols=334 Identities=12% Similarity=0.049 Sum_probs=203.9
Q ss_pred CCCCEEEecccccccccCCCCCHHHHHHHHHHHhhcc-ccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHH
Q psy14484 31 VSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLE-HVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEV 109 (430)
Q Consensus 31 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~ 109 (430)
.+|+.++++... .+|.+.+++.+.+.... .........+..++++++++++++.+.+.+++++||++++..
T Consensus 20 ~~~~~~~~~~~~--------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~ 91 (373)
T TIGR03812 20 SDGRILGSMCTN--------PHPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQ 91 (373)
T ss_pred CCCcEEEEEeCC--------chHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHH
Confidence 345555554442 57788888877654321 111111223555889999999998767788899999999999
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHH
Q psy14484 110 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIF 189 (430)
Q Consensus 110 al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 189 (430)
++.+++.... .+ .+++.|++.+++|..+... .. ....+...++.+..+.. |++
T Consensus 92 ~~~~~~~~~~-~~-~~g~~vl~~~~~h~~~~~~-~~------------~~G~~~~~v~~~~~~~~------------d~~ 144 (373)
T TIGR03812 92 AVRAAKNLAR-EE-KRTPNIIVPESAHFSFEKA-AE------------MLGLELRYAPLDEDYTV------------DVK 144 (373)
T ss_pred HHHHHHHHHh-cc-CCCcEEEECCcchHHHHHH-HH------------HcCCeEEEEeeCCCCCc------------CHH
Confidence 8877654210 00 1335788777665543211 11 11223344444332222 889
Q ss_pred HHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCc----ccc-cccccCCCCC
Q psy14484 190 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRT----GKF-FACEHAEIWP 264 (430)
Q Consensus 190 ~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~----g~~-~~~~~~~~~~ 264 (430)
++++.+.+ +..+++++.| ++++|.+.+ +++|.++|+++|+++|+|++|.++... |.. ..++......
T Consensus 145 ~l~~~l~~--~~~~vv~~~~--~~~tG~~~~----~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~ 216 (373)
T TIGR03812 145 DVEDLIDD--NTIGIVGIAG--TTELGQIDD----IEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGV 216 (373)
T ss_pred HHHHHHhh--CcEEEEEECC--CCCCCccCC----HHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCC
Confidence 99998863 2334444444 467888877 999999999999999999999744110 000 0011111134
Q ss_pred ceeeee--cccCCCccccEEEE-EcHHHHHhhhccCCcccccccC---C--CCCCHHHHHHHHHHHHHHhh---cCHHHH
Q psy14484 265 DFLCLS--KGITGGYLPLSLVM-TTDKIYNSIYYKNNINIFLHSH---S--YSGNPLACCAALATLEIFNK---DNILQR 333 (430)
Q Consensus 265 d~~~~s--K~l~gG~~~ig~~~-~~~~~~~~~~~~~~~~~~~~~~---t--~~~~~~~~~aa~~~l~~~~~---~~~~~~ 333 (430)
|.++++ |...++ .|.|+++ .++++.+.+.. ..++.... . .+.+..+.+++.++|+.+.+ ++..++
T Consensus 217 d~~~~s~~K~~~~~-~~~G~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~ 292 (373)
T TIGR03812 217 QSITIDPHKMGLSP-IPAGGILFRSKSYLKYLSV---DAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAE 292 (373)
T ss_pred CEEEECccccCCCc-CCceEEEEeCHHHHhhhcc---cCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 666554 633333 5787665 56777665532 01111111 0 12234566677777876643 345678
Q ss_pred HHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec--CCEEEEeCCCCCCH
Q psy14484 334 ISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI--GNTVYLMPPYILNK 411 (430)
Q Consensus 334 ~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~--~~~lR~~~~~~~t~ 411 (430)
..++.+++++.|+++ +......+...++.+... + ...+.+.|.++||.+... ++++|++++..+|+
T Consensus 293 ~~~~~~~l~~~L~~~---g~~~~~~~~~~~v~~~~~-~--------~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~ 360 (373)
T TIGR03812 293 CMENTRYLVEELKKI---GFEPVIEPVLNIVAFEVD-D--------PEEVRKKLRDRGWYVSVTRCPKALRIVVMPHVTR 360 (373)
T ss_pred HHHHHHHHHHHHHhC---CCeEEcCCCceEEEEEeC-C--------HHHHHHHHHHCCceeccCCCCCEEEEEEECCCCH
Confidence 888999999988876 221112233445555444 2 246889999999999876 46899999999999
Q ss_pred HHHHHHHHHHHH
Q psy14484 412 NEIQHMTSAIFQ 423 (430)
Q Consensus 412 e~i~~~~~~l~~ 423 (430)
+|+++++++|++
T Consensus 361 edid~l~~~L~~ 372 (373)
T TIGR03812 361 EHIEEFLEDLKE 372 (373)
T ss_pred HHHHHHHHHHhh
Confidence 999999999975
No 232
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.88 E-value=4.3e-20 Score=180.85 Aligned_cols=341 Identities=13% Similarity=0.090 Sum_probs=202.8
Q ss_pred EEEecccccccccCCCCC--HHHHHHHHHHHhhcc------ccccCCCCCHHHHHHHHHHHhhc--CCCCCeEEEcCCch
Q psy14484 35 RYLDAISSWWVNLFGHSN--SYINKALKNQLNKLE------HVMLSNLTHKPVIKLSEKLSSLT--QYKLGHCFYGSDGA 104 (430)
Q Consensus 35 ~~lD~~~~~~~~~lG~~~--p~v~~a~~~~~~~~~------~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~v~~~~sgt 104 (430)
..+||..|.. .+ ... +.+.+++.+.+.... .+....+..++++.+++.+.+.. ++++++|++|+|++
T Consensus 31 ~~i~l~~g~p--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~ 107 (416)
T PRK09440 31 GAIMLGGGNP--AH-IPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQ 107 (416)
T ss_pred CceeccCCCC--Cc-cCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChH
Confidence 4678876532 11 122 255666666554321 11112233356667777776543 35778999999999
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCcEEEE-EcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC---CCCCCCCCh
Q psy14484 105 SAVEVALKMSFHYWYNKGFLNKKKFIC-LQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS---RNINKGNSA 180 (430)
Q Consensus 105 eA~~~al~~~~~~~~~~g~~~~~~vl~-~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 180 (430)
+|+..+++++.... +..+++.|++ .+|+|+++...+......... ....++.+.+ +..
T Consensus 108 ~al~~~~~~l~~~~---~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~------ 169 (416)
T PRK09440 108 SAFFYLFNLFAGRR---ADGSLKKILFPLAPEYIGYADAGLEEDLFVSY---------RPNIELLPEGQFKYHV------ 169 (416)
T ss_pred HHHHHHHHHHhccc---cCCCCCeEEEecCCCchhhHHHhhccCceeec---------ccccccccccccccCC------
Confidence 99999998776310 0013567888 699999885432221110000 0011111111 111
Q ss_pred hHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccc-cccc
Q psy14484 181 NEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-ACEH 259 (430)
Q Consensus 181 ~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~-~~~~ 259 (430)
|+++|+ +. .+++++++.. ++|++| ...+.+.+++|.++|+++++++|+||+|..+. ....+ ....
T Consensus 170 ------d~~~l~--~~---~~~~~i~l~~-P~NPTG-~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~-~~~~~~~~~~ 235 (416)
T PRK09440 170 ------DFEHLH--ID---EDTGAICVSR-PTNPTG-NVLTDEELEKLDALARQHNIPLLIDNAYGPPF-PGIIFSEATP 235 (416)
T ss_pred ------CHHHcc--cC---CCceEEEEec-CCCCCC-ccCCHHHHHHHHHHHHHcCCcEEEeCCccccC-CCcchhhcCc
Confidence 677776 22 3556666666 778888 55678889999999999999999999996331 11111 0100
Q ss_pred --CCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCH-------
Q psy14484 260 --AEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNI------- 330 (430)
Q Consensus 260 --~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~------- 330 (430)
.+...-+.+|||....| +|+|++++++++++.+.. .......+.+.+++.++.++++ +..+
T Consensus 236 ~~~~~vI~~~SfSK~~~pG-lRiG~~i~~~~l~~~~~~------~~~~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~ 305 (416)
T PRK09440 236 LWNPNIILCMSLSKLGLPG-VRCGIVIADEEIIEALSN------MNGIISLAPGRLGPAIAAEMIE---SGDLLRLSETV 305 (416)
T ss_pred cccCCeEEEecccccCCCc-ceEEEEeCCHHHHHHHHH------HHHHhccCCCcHHHHHHHHHhc---cchHHHHHHHH
Confidence 11112234799974446 899999999999887765 2222334557777777777764 2222
Q ss_pred -HHHHHHHHHHHHHHHHch-hcCCCeeeEeec-ceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-----C----
Q psy14484 331 -LQRISQDMKKITKALTSL-ITHPKIINFRQK-GMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----G---- 398 (430)
Q Consensus 331 -~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-----~---- 398 (430)
...++++.+.+.+.|++. .... +....+. |.++++.+. .... . ..++.+.|.++||.+.|+ +
T Consensus 306 ~~~~~~~r~~~~~~~L~~~l~~~~-~~~~~p~gg~fiw~~~~-~~~~-~---~~~~~~~l~~~gV~v~pg~~F~~~~~~~ 379 (416)
T PRK09440 306 IRPFYRQKVQLAIALLRRYLPDEP-CLIHKPEGAIFLWLWFK-DLPI-T---TEELYQRLKARGVLVVPGHYFFPGLDED 379 (416)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCC-eEEecCCCceEEEEECC-CCCC-C---HHHHHHHHHHCCEEEechHhhCCCCccc
Confidence 223344444555555432 2221 2223454 566666665 3111 1 256888888999999874 1
Q ss_pred -----CEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 399 -----NTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 399 -----~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+++|++++ .+++++++++++|++++.+.
T Consensus 380 ~~~~~~~iRis~~--~~~~~l~~~i~~l~~~~~~~ 412 (416)
T PRK09440 380 WPHAHQCIRMNYV--QDDEEIEKGIAILAEEVEKA 412 (416)
T ss_pred cCCcCceEEEEec--CCHHHHHHHHHHHHHHHHHH
Confidence 27888765 47999999999999998764
No 233
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.88 E-value=6.7e-20 Score=176.70 Aligned_cols=302 Identities=15% Similarity=0.158 Sum_probs=195.8
Q ss_pred HHHHHHHHHHHhhcCCCC--CeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchh
Q psy14484 77 KPVIKLSEKLSSLTQYKL--GHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKE 154 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~--~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~ 154 (430)
+...++++.++++++... +.+++++||+++++.++..+.. +++.+++.+++|.+.....
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~--------~~~~vlv~~~~~~~~~~~~----------- 97 (368)
T PRK13479 37 ALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVP--------RDGKVLVPDNGAYGARIAQ----------- 97 (368)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccC--------CCCeEEEEeCCchHHHHHH-----------
Confidence 567889999999997543 4588999999999999988754 4567777777666542100
Q ss_pred hhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHh
Q psy14484 155 IYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNN 234 (430)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~ 234 (430)
........+..++.+.+... |++++++++++. .++.++.+.. +++++|...| +++|.++|++
T Consensus 98 ~~~~~g~~~~~i~~~~~~~~------------d~~~l~~~l~~~-~~~~~v~~~~-~~~~tG~~~~----~~~i~~l~~~ 159 (368)
T PRK13479 98 IAEYLGIAHVVLDTGEDEPP------------DAAEVEAALAAD-PRITHVALVH-CETTTGILNP----LDEIAAVAKR 159 (368)
T ss_pred HHHHcCCcEEEEECCCCCCC------------CHHHHHHHHHhC-CCCcEEEEEc-ccCccccccC----HHHHHHHHHH
Confidence 01111233445554432222 789999988753 3455666666 7788998888 8999999999
Q ss_pred cCCEEEEeccccCCCCcccccccccCCCCCceee--eecccCCCccccEEEEEcHHHHHhhhccCCccccc---------
Q psy14484 235 YNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFL--------- 303 (430)
Q Consensus 235 ~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~--~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~--------- 303 (430)
+|+++|+|++++ ++.. ..... ...+|+++ ++|.+.|. .++|++++++++.+.+... ..++.
T Consensus 160 ~~~~livDa~~~-~g~~--~~~~~--~~~~d~~v~s~~K~l~g~-~G~G~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 231 (368)
T PRK13479 160 HGKRLIVDAMSS-FGAI--PIDIA--ELGIDALISSANKCIEGV-PGFGFVIARRSELEACKGN--SRSLSLDLYDQWAY 231 (368)
T ss_pred cCCEEEEEcccc-cCCc--ccccc--ccCceEEEecCccccccC-CCceEEEECHHHHHHhhcC--CCCeeecHHHHHhh
Confidence 999999998774 6532 22222 33467664 56988764 3579999999888776541 11100
Q ss_pred ----ccCCCCCCHHHHHHHHHHHHHHhh----cCHHHHHHHHHHHHHHHHHchhcCCCeee-EeecceEEEEEEeecCCc
Q psy14484 304 ----HSHSYSGNPLACCAALATLEIFNK----DNILQRISQDMKKITKALTSLITHPKIIN-FRQKGMIWAFDVIIEDPE 374 (430)
Q Consensus 304 ----~~~t~~~~~~~~~aa~~~l~~~~~----~~~~~~~~~~~~~l~~~l~~l~~~~~~~~-~~~~g~~~~~~~~~~~~~ 374 (430)
....|+.+..+..+..++++.+.+ ++..+++.++.+++++.|+++ +...+.. .........+.+. ....
T Consensus 232 ~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-~~~~ 309 (368)
T PRK13479 232 MEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL-GFEPLLDAEIQSPIIVTFHAP-ADPA 309 (368)
T ss_pred hcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCcccCCchhcCceEEEEECC-CCCC
Confidence 111235566666666677765533 234466777777888877765 2221111 0111223334333 2110
Q ss_pred cchhHHHHHHHHHHHCCcEEeec----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 375 QIETFSKKFFVAALKNELLLRPI----GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 375 ~~~~~a~~~~~~l~~~Gv~~~~~----~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.. ..++.+.|.++||.+.++ .+++|++....+++++++.++++|++++.++
T Consensus 310 -~~--~~~l~~~L~~~gi~v~~g~~~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 310 -YD--FKEFYERLKEQGFVIYPGKLTQVDTFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred -cC--HHHHHHHHHHCCEEEecCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 11 357899999999999875 2589998767889999999999999988753
No 234
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.87 E-value=5e-20 Score=179.35 Aligned_cols=340 Identities=12% Similarity=0.047 Sum_probs=197.0
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhcccc--ccCCCCCHHHHHHHHHHHhhc---CCCCCeEEEcCCchHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHV--MLSNLTHKPVIKLSEKLSSLT---QYKLGHCFYGSDGASA 106 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~---~~~~~~v~~~~sgteA 106 (430)
.+..++|+..| ...++ .+|.+.+++.+.+...... ...+.+.....++++.+++.+ ..++++|++|+|++++
T Consensus 31 ~~~~~i~l~~~--~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~a 107 (402)
T TIGR03542 31 PSADIIRLGIG--DTTQP-LPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCD 107 (402)
T ss_pred CCCCeEEcCCC--CCCCC-CCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHH
Confidence 36778998876 34444 4688899998877653210 111112222334444444432 3578899999999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 186 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (430)
+...+.+ .. +++.|++.+|+|.++.......+. +.....- ........++.......
T Consensus 108 l~~l~~l-~~--------~gd~Vlv~~P~y~~~~~~~~~~g~-~~~~~~~-~~~~~~~~v~~~~~~~~------------ 164 (402)
T TIGR03542 108 VFRLQSL-FG--------SDNTVAVQDPVYPAYVDSNVMAGR-AGVLDDD-GRYSKITYLPCTKENNF------------ 164 (402)
T ss_pred HHHHHHh-cC--------CCCEEEEeCCCCcchHHHHHHcCC-ccccccc-cccceEEEeecchhhCC------------
Confidence 9875433 22 567899999999988554443322 1110000 00001122222110000
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc-cccc-ccCC---
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-FFAC-EHAE--- 261 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~-~~~~-~~~~--- 261 (430)
..+ ++ + ..+++++++.. ++|++| ...+.+.+++|.++|++||+++|+||+|..|...+. .... ...+
T Consensus 165 ~~~-~~----~-~~~~~~i~l~n-P~NPTG-~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~ 236 (402)
T TIGR03542 165 IPD-LP----E-EPKIDIIYLCS-PNNPTG-TVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKE 236 (402)
T ss_pred CCC-cc----c-cCCceEEEEeC-CCCCCC-ccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcc
Confidence 111 11 1 13456666666 788888 667888899999999999999999999998754332 1111 1111
Q ss_pred CCCceeeeecccC-CCccccEEEEEcHHHH--------HhhhccCCcccccccCCC-CCCHHHHHHHHHHHHH--Hh-hc
Q psy14484 262 IWPDFLCLSKGIT-GGYLPLSLVMTTDKIY--------NSIYYKNNINIFLHSHSY-SGNPLACCAALATLEI--FN-KD 328 (430)
Q Consensus 262 ~~~d~~~~sK~l~-gG~~~ig~~~~~~~~~--------~~~~~~~~~~~~~~~~t~-~~~~~~~~aa~~~l~~--~~-~~ 328 (430)
....+-+|||.++ .| +|+|+++++++++ ..+.. ....++ +.+.+++.++.+.+.. .. ..
T Consensus 237 ~vi~~~SfSK~~g~pG-lRiG~~i~~~~l~~~~~~~~~~~~~~-------~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~ 308 (402)
T TIGR03542 237 CAIEFRSFSKTAGFTG-VRLGWTVVPKELTYADGHSVIQDWER-------RQCTKFNGASYPVQRAAEAAYAGEGLQPIL 308 (402)
T ss_pred cEEEEecCccccCCCC-cceEEEEecHHHhhcchhhHHHHHHH-------HhhhcccCCCHHHHHHHHHHHcCcchhHHH
Confidence 1122347999997 56 8999999998876 22211 011222 3566777666665541 00 01
Q ss_pred CHHHHHHHHHHHHHHHHHchhcCCCeeeEee-cceEEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec-------CC
Q psy14484 329 NILQRISQDMKKITKALTSLITHPKIINFRQ-KGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------GN 399 (430)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~-------~~ 399 (430)
+..+.++++.+.+.+.|+.. . +....+ .|.++++.+. .... +.++.+.|+ +.||.+.|+ .+
T Consensus 309 ~~~~~~~~~~~~~~~~L~~~---~-~~~~~~~~~~f~~v~l~-~~~~-----~~~l~~~l~~~~gv~v~pg~~f~~~~~~ 378 (402)
T TIGR03542 309 EAISYYMENARILRKALEAA---G-FKVYGGEHAPYLWVKTP-EGIS-----SWDFFDFLLYQYHVVGTPGSGFGPSGEG 378 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhc---C-ceecCCCceeEEEEECC-CCCC-----HHHHHHHHHHhCCEEEeCchhhCCCCCC
Confidence 12334455555565655543 2 222233 3567777765 3211 246888877 569999885 25
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 400 TVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 400 ~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
++|++. ..+++++++++++|+++|
T Consensus 379 ~iRis~--~~~~~~l~~~l~~l~~~~ 402 (402)
T TIGR03542 379 FVRFSA--FGKRENIVEACERIKEAL 402 (402)
T ss_pred EEEEEe--cCCHHHHHHHHHHHHhhC
Confidence 789973 458899999999998753
No 235
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.87 E-value=1.4e-19 Score=175.07 Aligned_cols=320 Identities=14% Similarity=0.129 Sum_probs=202.3
Q ss_pred CCHHHHHHHHHHHhhccc-cccCCCC-----CHHHHHHHHHHHhhcCCCC-CeEEEcCCchHHHHHHHHHHHHhhhhcCC
Q psy14484 51 SNSYINKALKNQLNKLEH-VMLSNLT-----HKPVIKLSEKLSSLTQYKL-GHCFYGSDGASAVEVALKMSFHYWYNKGF 123 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~~~~-~~~~~~~-----~~~~~~l~~~l~~~~~~~~-~~v~~~~sgteA~~~al~~~~~~~~~~g~ 123 (430)
.++.+.+++.+.+..... .....+. .....++++.+++.++... ++|++++|+++++..++.....
T Consensus 12 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~------- 84 (376)
T TIGR01977 12 KPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGLLK------- 84 (376)
T ss_pred CCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhccC-------
Confidence 457899999888876421 1111121 2556788889999987543 4899999999999998877543
Q ss_pred CCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeE
Q psy14484 124 LNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIA 203 (430)
Q Consensus 124 ~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~ 203 (430)
+++.|++.+..|+.......... .....+...++.+.... .|++++++.++ ++++
T Consensus 85 -~gd~vl~~~~~~~~~~~~~~~~~---------~~~g~~~~~v~~~~~~~------------~d~~~l~~~~~---~~~~ 139 (376)
T TIGR01977 85 -EGDHVITTPMEHNSVARPLECLK---------EQIGVEITIVKCDNEGL------------ISPERIKRAIK---TNTK 139 (376)
T ss_pred -CCCEEEECcchhhHHHHHHHHHH---------HHcCcEEEEEecCCCCC------------cCHHHHHHhcC---CCCe
Confidence 56778877666544321100000 00112233443332221 17889998885 4678
Q ss_pred EEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeee--cccCCCccccE
Q psy14484 204 AIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITGGYLPLS 281 (430)
Q Consensus 204 ~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s--K~l~gG~~~ig 281 (430)
++++.. +++++|...+ +++|.++|+++|+++|+|++++ +|... +... ...+|++++| |.+++. ..+|
T Consensus 140 ~v~~~~-~~n~tG~~~~----~~~i~~l~~~~~~~livD~a~~-~g~~~--~~~~--~~~~D~~~~s~~K~l~~p-~g~g 208 (376)
T TIGR01977 140 LIVVSH-ASNVTGTILP----IEEIGELAQENGIFFILDAAQT-AGVIP--IDMT--ELAIDMLAFTGHKGLLGP-QGTG 208 (376)
T ss_pred EEEEEC-CCCCccccCC----HHHHHHHHHHcCCEEEEEhhhc-cCccC--CCch--hcCCCEEEecccccccCC-CCce
Confidence 888888 8999998888 8999999999999999999996 54321 1222 2357887665 988764 3477
Q ss_pred EEEEcHHH-HHhhhccCC-c------------ccccccCCCCCCHHHHHHHHHHHHHHhhc---CHHHHHHHHHHHHHHH
Q psy14484 282 LVMTTDKI-YNSIYYKNN-I------------NIFLHSHSYSGNPLACCAALATLEIFNKD---NILQRISQDMKKITKA 344 (430)
Q Consensus 282 ~~~~~~~~-~~~~~~~~~-~------------~~~~~~~t~~~~~~~~~aa~~~l~~~~~~---~~~~~~~~~~~~l~~~ 344 (430)
+++.+++. ...+...+. . +.+. .+ +.+...+.+..++++.+.+. ...++.+++.+++.+.
T Consensus 209 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~-~~--t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~ 285 (376)
T TIGR01977 209 GLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFE-SG--TLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNG 285 (376)
T ss_pred EEEEcCCcCcCceecCCCccccccccccccchhhcc-CC--CCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 78777653 111111000 0 0011 11 23455566666778776543 4567788888888888
Q ss_pred HHchhcCCCeee--EeecceEEEEEEeecCCccchhHHHHHHHHHHHC-CcEEeec---------------CCEEEEeCC
Q psy14484 345 LTSLITHPKIIN--FRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKN-ELLLRPI---------------GNTVYLMPP 406 (430)
Q Consensus 345 l~~l~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~-Gv~~~~~---------------~~~lR~~~~ 406 (430)
|+++........ ....+.++.+.+. .. . ...+.+.|.++ ||.+..+ .+.+|++++
T Consensus 286 l~~~~~~~~~~~~~~~~~~~~v~~~~~-~~---~---~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~ 358 (376)
T TIGR01977 286 LREINKVKIYGPADPANRVGVVSFTVE-GI---D---SEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLG 358 (376)
T ss_pred HhcCCCeEEeCCCCccccCCeEEEEEC-CC---C---HHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecC
Confidence 876522211111 1113455666554 21 1 35788999887 8887642 268999999
Q ss_pred CCCCHHHHHHHHHHHHH
Q psy14484 407 YILNKNEIQHMTSAIFQ 423 (430)
Q Consensus 407 ~~~t~e~i~~~~~~l~~ 423 (430)
..+|++|++.++++|++
T Consensus 359 ~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 359 YFNTEEEIEKLLEALSE 375 (376)
T ss_pred CCCCHHHHHHHHHHHhh
Confidence 99999999999999975
No 236
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.87 E-value=1.1e-19 Score=174.50 Aligned_cols=329 Identities=9% Similarity=0.037 Sum_probs=194.9
Q ss_pred CCCCHHHHHHHHHHHhhcccccc-CC----CCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCC
Q psy14484 49 GHSNSYINKALKNQLNKLEHVML-SN----LTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGF 123 (430)
Q Consensus 49 G~~~p~v~~a~~~~~~~~~~~~~-~~----~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~ 123 (430)
|+-.|.+++++.+.-........ .. ..++...++++.+++.++. +++++++|+++++..++..+..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~~i~~~~g~t~al~~~l~~~~~------- 81 (361)
T cd06452 11 GRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGM--DEARVTPGAREGKFAVMHSLCE------- 81 (361)
T ss_pred CCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCC--ceEEEeCCHHHHHHHHHHHhcC-------
Confidence 55678888888876532221110 11 1235678999999999964 8999999999999999987754
Q ss_pred CCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCC--CCCCCCChhHHHHHHHHHHHHHHHhCC--
Q psy14484 124 LNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSR--NINKGNSANEIARCAIFDLEILLKKNH-- 199 (430)
Q Consensus 124 ~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~~~le~~l~~~~-- 199 (430)
+++.|++..++|.+.... ... .......++.+... .. |++++++++++..
T Consensus 82 -~gd~Vl~~~~~~~~~~~~-~~~------------~g~~~~~v~~~~~~~~~~------------d~~~l~~~l~~~~~~ 135 (361)
T cd06452 82 -KGDWVVVDGLAHYTSYVA-AER------------AGLNVREVPNTGHPEYHI------------TPEGYAEVIEEVKDE 135 (361)
T ss_pred -CCCEEEEcCCcchHHHHH-HHh------------cCCEEEEEecCCCCCccc------------CHHHHHHHHHHHhhc
Confidence 566777766655443211 111 11233344433211 11 7888988886421
Q ss_pred --CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeeecccCCCc
Q psy14484 200 --NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGY 277 (430)
Q Consensus 200 --~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~ 277 (430)
.+++++++.. +++++|...+ +++|.++|+++|+++|+||+|. ++.. .+....++....+.+++|+++++
T Consensus 136 ~~~~~~lv~l~~-p~n~tG~~~~----~~~i~~~~~~~~~~vivD~a~~-~g~~--~~~~~~~~~d~~~~s~~K~l~~~- 206 (361)
T cd06452 136 FGKPPALALLTH-VDGNYGNLHD----AKKIAKVCHEYGVPLLLNGAYT-VGRM--PVSGKELGADFIVGSGHKSMAAS- 206 (361)
T ss_pred cCCCceEEEEEC-CCCCCeeecc----HHHHHHHHHHcCCeEEEECCcc-cCCc--CCCHHHcCCCEEEecCCccccCC-
Confidence 3577888877 8888897766 9999999999999999999987 4322 12222233322344678999876
Q ss_pred cccEEEEEcHHHHHhhhccCCccc----ccccCCCCCCHHHHHHHHHHHHHHhh-cCHHHHHHHHHHHHHHHHHchhcCC
Q psy14484 278 LPLSLVMTTDKIYNSIYYKNNINI----FLHSHSYSGNPLACCAALATLEIFNK-DNILQRISQDMKKITKALTSLITHP 352 (430)
Q Consensus 278 ~~ig~~~~~~~~~~~~~~~~~~~~----~~~~~t~~~~~~~~~aa~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~l~~~~ 352 (430)
.++|++++++++++.+........ ...+.+. .......+.++++.+.+ -....+..+..+++++.|+++....
T Consensus 207 ~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~~ 284 (361)
T cd06452 207 APIGVLATTEEWADIVFRTSQMFKIKEVELLGCTL--RGAPLVTLMASFPHVKERVKRWDEEVEKARWFVAELEKIEGIK 284 (361)
T ss_pred CCeEEEEECHHHHHHHhccccccccceeeeecccc--CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 589999999998887754110000 0011111 12223334444543221 1112222334567777777652221
Q ss_pred CeeeEeecceEEEEEEeecCCc-c--chhHHHHHHHHHHHCCcEEeec--CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 353 KIINFRQKGMIWAFDVIIEDPE-Q--IETFSKKFFVAALKNELLLRPI--GNTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 353 ~~~~~~~~g~~~~~~~~~~~~~-~--~~~~a~~~~~~l~~~Gv~~~~~--~~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
.+........++.+... .-.. . ......++.+.|+++||..... ++++|++. ..+++++++.++++|+++.
T Consensus 285 v~~~~~~~~n~~~~~~~-~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~~~ri~~-~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 285 QLGEKPKNHDLMFFETP-SFDEIAKKHKRRGYFLYSELKKRGIHGIKPGLTRYFKLST-YGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred EECCCCCCCceEEEEcC-CcchhhhhccccchhHHHHHHHcCceEEcCCCceEEEEEe-cCCCHHHHHHHHHHHHHHh
Confidence 11111234445544432 1000 0 0000236899999999996543 35788876 3479999999999998654
No 237
>PLN02651 cysteine desulfurase
Probab=99.87 E-value=5.4e-20 Score=176.85 Aligned_cols=314 Identities=12% Similarity=0.062 Sum_probs=195.0
Q ss_pred CCCCHHHHHHHHHHHhhccccccC------CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcC
Q psy14484 49 GHSNSYINKALKNQLNKLEHVMLS------NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKG 122 (430)
Q Consensus 49 G~~~p~v~~a~~~~~~~~~~~~~~------~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g 122 (430)
+.-++++.+++.+.+......... ....+..+++++.++++++.++++++|++|+++|++.++..+.....
T Consensus 9 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~--- 85 (364)
T PLN02651 9 TPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYK--- 85 (364)
T ss_pred CCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcc---
Confidence 346789999999887542111100 01124567888999999987788999999999999999987754211
Q ss_pred CCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCe
Q psy14484 123 FLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKI 202 (430)
Q Consensus 123 ~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 202 (430)
+++++|++.+..|+........ ......+...++.+..... |+++++++++ +++
T Consensus 86 -~~g~~vl~~~~~h~s~~~~~~~----------~~~~g~~v~~v~~~~~~~~------------d~~~l~~~i~---~~t 139 (364)
T PLN02651 86 -DKKKHVITTQTEHKCVLDSCRH----------LQQEGFEVTYLPVKSDGLV------------DLDELAAAIR---PDT 139 (364)
T ss_pred -CCCCEEEEcccccHHHHHHHHH----------HHhcCCEEEEEccCCCCcC------------CHHHHHHhcC---CCc
Confidence 1446677655444332111111 0011223345554432222 7889999885 468
Q ss_pred EEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeee--cccCCCcccc
Q psy14484 203 AAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITGGYLPL 280 (430)
Q Consensus 203 ~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s--K~l~gG~~~i 280 (430)
+++++.. +++++|.+.| +++|.++|+++|+++++|++|+ +|.. .++...+.+|++++| | ++|. ..+
T Consensus 140 ~lv~v~~-~~n~tG~~~~----l~~I~~~~~~~g~~~~vD~a~~-~g~~----~~~~~~~~~D~~~~s~hK-~~gp-~G~ 207 (364)
T PLN02651 140 ALVSVMA-VNNEIGVIQP----VEEIGELCREKKVLFHTDAAQA-VGKI----PVDVDDLGVDLMSISGHK-IYGP-KGV 207 (364)
T ss_pred EEEEEEC-CCCCceeccc----HHHHHHHHHHcCCEEEEEcchh-hCCc----ccCcccCCCCEEEechhh-hCCC-Cce
Confidence 8889988 9999998888 9999999999999999999997 4322 122334457999876 7 4432 468
Q ss_pred EEEEEcHHHHHhhhcc--C--CcccccccCCCCCCHHHHHHHHHHHHHHhh--cCHHHHHHHHHHHHHHHHHc-hhcCCC
Q psy14484 281 SLVMTTDKIYNSIYYK--N--NINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDMKKITKALTS-LITHPK 353 (430)
Q Consensus 281 g~~~~~~~~~~~~~~~--~--~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~-l~~~~~ 353 (430)
|+++++++....+.+. + ....+. .+ +.+..++.+..++|+.+.+ ++..++.+++.+++.+.|++ +.....
T Consensus 208 g~l~v~~~~~~~l~p~~~g~~~~~~~~-~G--T~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i 284 (364)
T PLN02651 208 GALYVRRRPRVRLEPLMSGGGQERGRR-SG--TENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRAKLGGVRV 284 (364)
T ss_pred EEEEEcCCCCCCCCccccCCCccCCcc-CC--CccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEE
Confidence 9999998765554331 0 001111 12 3355666666677776643 34556677777777777764 222222
Q ss_pred eee--E-eecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec------------------------CCEEEEeCC
Q psy14484 354 IIN--F-RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI------------------------GNTVYLMPP 406 (430)
Q Consensus 354 ~~~--~-~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~------------------------~~~lR~~~~ 406 (430)
... . .....++.|.+. .- . ...+.+.|.+ |.++.+ .+.+|++++
T Consensus 285 ~~~~~~~~~~~~i~~~~~~-~~-~-----~~~~~~~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~ 355 (364)
T PLN02651 285 NGPRDPEKRYPGTLNLSFA-YV-E-----GESLLMGLKE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVG 355 (364)
T ss_pred ECCCCcccCcCCEEEEEeC-CC-C-----HHHHHHHhCC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcC
Confidence 221 1 112345666554 21 1 2457777644 555421 258999999
Q ss_pred CCCCHHHHH
Q psy14484 407 YILNKNEIQ 415 (430)
Q Consensus 407 ~~~t~e~i~ 415 (430)
.++|++|||
T Consensus 356 ~~~t~~did 364 (364)
T PLN02651 356 RFTTEEEVD 364 (364)
T ss_pred CCCCHHHcC
Confidence 999999985
No 238
>PLN02397 aspartate transaminase
Probab=99.86 E-value=5e-19 Score=172.91 Aligned_cols=302 Identities=9% Similarity=0.007 Sum_probs=176.3
Q ss_pred CCCHHHHHHHHHHHhhcCC--CCCeEEE--cCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCC
Q psy14484 74 LTHKPVIKLSEKLSSLTQY--KLGHCFY--GSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNI 149 (430)
Q Consensus 74 ~~~~~~~~l~~~l~~~~~~--~~~~v~~--~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~ 149 (430)
+..++++.+++++.+.... ..++|.. +.+|+.+..+++.+..... +++.|++.+|+|.++.......+.
T Consensus 92 G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~------pGd~Vlv~~P~y~~y~~~~~~~g~- 164 (423)
T PLN02397 92 GLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFY------PGSTIYIPNPTWGNHHNIFRDAGV- 164 (423)
T ss_pred CCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhC------CCCEEEEeCCCchhHHHHHHHcCC-
Confidence 3345556666665443210 1123321 4454445443333333221 567899999999988554444332
Q ss_pred ccchhhhhccCCCeeEeCC-C-CCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHH
Q psy14484 150 QSFKEIYTSLLNKTYIITT-P-DSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKL 227 (430)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~ 227 (430)
..+.++. + +.+.. |++.+++.+..+..++.++++.. .+|++| ...+.+.+++
T Consensus 165 ------------~~~~v~l~~~~~~~~------------d~~~l~~~l~~~~~~~~~i~~~~-P~NPTG-~v~s~e~l~~ 218 (423)
T PLN02397 165 ------------PVRTYRYYDPKTRGL------------DFDGLLEDLKAAPDGSFVLLHAC-AHNPTG-VDPTPEQWEQ 218 (423)
T ss_pred ------------eEEEeecccCcCCcc------------CHHHHHHHHHhCCCCCEEEEeCC-CCCCCC-CCCCHHHHHH
Confidence 2223332 1 11221 77888888765434567777776 889999 6667888999
Q ss_pred HHHHHHhcCCEEEEeccccCCCCccc---cccc-ccCCCCCc---eeeeecccC-CCccccEEEE--E-cHHHHHhhhcc
Q psy14484 228 VREICNNYNIHLIADEIAVGCGRTGK---FFAC-EHAEIWPD---FLCLSKGIT-GGYLPLSLVM--T-TDKIYNSIYYK 296 (430)
Q Consensus 228 l~~l~~~~gi~li~DEv~~g~g~~g~---~~~~-~~~~~~~d---~~~~sK~l~-gG~~~ig~~~--~-~~~~~~~~~~~ 296 (430)
|.++|++||+++|.||+|.+|...+. .... .......+ +-+|||.++ .| +|+|+++ + ++++++.+..
T Consensus 219 i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G-~RvG~~v~~~~~~~~~~~~~~- 296 (423)
T PLN02397 219 ISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYG-ERVGALSVVCKSADVAVRVKS- 296 (423)
T ss_pred HHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCcc-ccceEEEEEeCCHHHHHHHHH-
Confidence 99999999999999999998864331 1011 11111122 337999998 47 8999984 4 4554433221
Q ss_pred CCcccccccCCCCCCHHHHHHHHHHHHHHh--------hcCHHHHHHHHHHHHHHHHHchhcCC-CeeeEeecceEEEEE
Q psy14484 297 NNINIFLHSHSYSGNPLACCAALATLEIFN--------KDNILQRISQDMKKITKALTSLITHP-KIINFRQKGMIWAFD 367 (430)
Q Consensus 297 ~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--------~~~~~~~~~~~~~~l~~~l~~l~~~~-~~~~~~~~g~~~~~~ 367 (430)
.-........++.+.+++.++.++|+.-. -++..+.++++.+.+.+.|+++ ..+ .+....++|.|+.|.
T Consensus 297 -~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~-~~~~~~~~~~p~gg~fl~~ 374 (423)
T PLN02397 297 -QLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEAR-GSPGDWSHITKQIGMFSFT 374 (423)
T ss_pred -HHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCcccCCceEEEec
Confidence 00001111223345566666665554210 1233456677777777777765 211 233445677777664
Q ss_pred EeecCCccchhHHHHHHHHHH-HCCcEEeecCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 368 VIIEDPEQIETFSKKFFVAAL-KNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 368 ~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
-. + ..++++|+ +.||.+.+.+ |+++. ..+++.+++++++|+++++
T Consensus 375 ~l-~---------~~~~~~Ll~~~~V~v~~~~---Ri~~~-~~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 375 GL-N---------KEQVDRMTKEYHIYMTRDG---RISMA-GLSSKNVPYLADAIHAVVT 420 (423)
T ss_pred CC-C---------HHHHHHHHHhCCEEECCCC---eEEEe-eCCHHHHHHHHHHHHHHHh
Confidence 33 2 34777775 5599987544 88653 3889999999999999874
No 239
>KOG1549|consensus
Probab=99.86 E-value=5e-19 Score=164.02 Aligned_cols=345 Identities=15% Similarity=0.079 Sum_probs=211.9
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCC-CCC---HHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSN-LTH---KPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEV 109 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~-~~~---~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~ 109 (430)
--|+|..+ .|-.+|+|.+|+.+.+..+...+.+. +.. +..++.++.+++++++++.+|+||+++||++++
T Consensus 44 ~vyld~~a------t~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nl 117 (428)
T KOG1549|consen 44 PVYLDNQA------TGPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNL 117 (428)
T ss_pred cEEEecCc------CCCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHH
Confidence 46788544 45579999999999887653222212 222 335778889999999999999999999999999
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHH
Q psy14484 110 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIF 189 (430)
Q Consensus 110 al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 189 (430)
+++........ +.++.|+.....|...........+ ...++.++|++.++.. |++
T Consensus 118 vl~~v~~~~~~----~~~k~iitl~~eH~~v~~s~~~l~~---------~g~~Vt~lpv~~~~~~------------d~~ 172 (428)
T KOG1549|consen 118 VLKGVARFFGD----KTKKHIITLQTEHPCVLDSCRALQE---------EGLEVTYLPVEDSGLV------------DIS 172 (428)
T ss_pred HHHHhhccccc----cccceEEEecccCcchhHHHHHHHh---------cCeEEEEeccCccccc------------cHH
Confidence 99966543211 2333455555666654332222211 1245567777744433 899
Q ss_pred HHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeee
Q psy14484 190 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCL 269 (430)
Q Consensus 190 ~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~ 269 (430)
.+++.|+ .++.+|.+.. |+++.|..+| +++|.++|++.++.+++|.+|+ +|.. ..+.-++.+|++++
T Consensus 173 ~~~~~i~---~~T~lv~I~~-Vnn~~gv~~P----v~EI~~icr~~~v~v~~DaAQa-vG~i----~vDV~eln~D~~s~ 239 (428)
T KOG1549|consen 173 KLREAIR---SKTRLVSIMH-VNNEIGVLQP----VKEIVKICREEGVQVHVDAAQA-VGKI----PVDVQELNADFLSI 239 (428)
T ss_pred HHHHhcC---CCceEEEEEe-cccCcccccc----HHHHHHHhCcCCcEEEeehhhh-cCCc----cccHHHcCchheee
Confidence 9999996 6899999999 9999999999 9999999999999999999997 6543 34445667899988
Q ss_pred e--cccCCCccccEEEEEcHHH---H--HhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh--cCHHHHHHHHHHH
Q psy14484 270 S--KGITGGYLPLSLVMTTDKI---Y--NSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDMKK 340 (430)
Q Consensus 270 s--K~l~gG~~~ig~~~~~~~~---~--~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~--~~~~~~~~~~~~~ 340 (430)
+ |.++. -++|++++++.. . ..+..++..+.+.-+.--.+..+...+| .+++.. ......+.++...
T Consensus 240 s~HK~ygp--~~iGaLYvr~~~~~~~~~p~~~GGgq~r~~rsGT~~~~~~~~~gsA---~e~~~~~~~~~~~~~~~~~~~ 314 (428)
T KOG1549|consen 240 SAHKIYGP--PGIGALYVRRKRPRLRVEPPLSGGGQERGLRSGTVATPLAVGLGSA---AEFVNKEMAYDEAIIKRLSEK 314 (428)
T ss_pred ecccccCC--CcceEEEEccCCCcccccCcccCCccccccccCCcCchhhhhhHHH---HHHHHhhcchhHHHHHHHHHH
Confidence 7 76665 349999999621 1 1122223334433322222233333333 343332 2223344445555
Q ss_pred HHHHHHc-hhc--CCCee-eEeecceEEEEEEeecCC--------------ccchhHHHHHHHHHHHCCcEEeecCCEEE
Q psy14484 341 ITKALTS-LIT--HPKII-NFRQKGMIWAFDVIIEDP--------------EQIETFSKKFFVAALKNELLLRPIGNTVY 402 (430)
Q Consensus 341 l~~~l~~-l~~--~~~~~-~~~~~g~~~~~~~~~~~~--------------~~~~~~a~~~~~~l~~~Gv~~~~~~~~lR 402 (430)
+..++.. +.. ..+.. ...+....+.+... .+. ..+.....+..-.+++.|+-.......+|
T Consensus 315 ll~~i~~~~~~~~~~G~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iR 393 (428)
T KOG1549|consen 315 LLMGIGQSLPEVTLNGSGKSRYPGLVSLSFPYV-EGESLLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIR 393 (428)
T ss_pred HHHHHhhhCchhhccCCcccccccceeeecccc-cCcchhhhhhhhhhcccchhhcCCCCcchhhhhcCcchhhhcceeE
Confidence 5555532 211 11111 11111222222211 000 00000001233345666775555568999
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 403 LMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 403 ~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
|+....++++|++.+++.+++.++..
T Consensus 394 is~G~y~t~~di~~~~~~i~~~v~~~ 419 (428)
T KOG1549|consen 394 ISIGRYTTEEDIDYLVDAIKKLVSLL 419 (428)
T ss_pred EeeeeeCcHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999887654
No 240
>PRK14012 cysteine desulfurase; Provisional
Probab=99.85 E-value=1.7e-18 Score=168.75 Aligned_cols=336 Identities=12% Similarity=0.084 Sum_probs=198.4
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCC--------CCHHHHHHHHHHHhhcCCCCCeEEEcCCchH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNL--------THKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 105 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~--------~~~~~~~l~~~l~~~~~~~~~~v~~~~sgte 105 (430)
+.|+|..+. +..++.+.+++.+++........... ..+..+++++.++++++.+++++++++||++
T Consensus 4 ~iyld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~ 77 (404)
T PRK14012 4 PIYLDYSAT------TPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATE 77 (404)
T ss_pred eEEecCcCC------CCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHH
Confidence 467885543 34678999999887751111111110 1134567888999999877788999999999
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHH
Q psy14484 106 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 185 (430)
Q Consensus 106 A~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (430)
|++.+++++.... . ++++.|++.+..|+........+ .........++.+.+...
T Consensus 78 al~~~l~~l~~~~--~--~~gd~Vi~~~~~~~s~~~~~~~~----------~~~g~~~~~v~~~~~g~~----------- 132 (404)
T PRK14012 78 SDNLAIKGAAHFY--Q--KKGKHIITSKTEHKAVLDTCRQL----------EREGFEVTYLDPQSNGII----------- 132 (404)
T ss_pred HHHHHHHHHHHhh--c--CCCCEEEEecCccHHHHHHHHHH----------HhCCCEEEEEccCCCCcC-----------
Confidence 9999988765311 0 14567777666654332111110 001123344544432222
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCc
Q psy14484 186 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 265 (430)
Q Consensus 186 ~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d 265 (430)
|+++|+++++ ++++++++.. +++++|.+.+ +++|.++|+++|+++|+|++|+ ++... ++.....+|
T Consensus 133 -d~~~l~~~i~---~~t~lv~~~~-~~n~tG~~~~----~~~I~~la~~~g~~vivD~a~~-~g~~~----~~~~~~~~D 198 (404)
T PRK14012 133 -DLEKLEAAMR---DDTILVSIMH-VNNEIGVIQD----IAAIGEICRERGIIFHVDAAQS-VGKVP----IDLSKLKVD 198 (404)
T ss_pred -CHHHHHHhcC---CCCEEEEEEC-cCCCccchhh----HHHHHHHHHHcCCEEEEEcchh-cCCcc----cCcccCCCC
Confidence 7899999885 4678888888 9999998887 9999999999999999999997 43321 122234589
Q ss_pred eeeee--cccCCCccccEEEEEcHHHHHhhhcc--CC--cccccccCCCCCCHHHHHHHHHHHHHHh--hcCHHHHHHHH
Q psy14484 266 FLCLS--KGITGGYLPLSLVMTTDKIYNSIYYK--NN--INIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQD 337 (430)
Q Consensus 266 ~~~~s--K~l~gG~~~ig~~~~~~~~~~~~~~~--~~--~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~ 337 (430)
++++| |.++. .++|+++++++....+.+. +. .+.+ ..+|. +.....+..++++.++ .++..++.+++
T Consensus 199 ~~~~s~~K~~gp--~g~G~l~~~~~~~~~~~~~~~g~~~~~~~-~~gt~--~~~~~~~l~~al~~~~~~~~~~~~~~~~l 273 (404)
T PRK14012 199 LMSFSAHKIYGP--KGIGALYVRRKPRVRLEAQMHGGGHERGM-RSGTL--PTHQIVGMGEAARIAKEEMATENERIRAL 273 (404)
T ss_pred EEEEehhhccCC--CceEEEEEecCCCCCCCceecCCCccCCc-cCCCc--CHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 88887 96653 2588998887643322210 00 0011 11222 2333333334444332 23355677778
Q ss_pred HHHHHHHHHchhcCCCeee-E-eecce-EEEEEEeecCCccchhHHHHHHHHHHHCCcE----Eee--------------
Q psy14484 338 MKKITKALTSLITHPKIIN-F-RQKGM-IWAFDVIIEDPEQIETFSKKFFVAALKNELL----LRP-------------- 396 (430)
Q Consensus 338 ~~~l~~~l~~l~~~~~~~~-~-~~~g~-~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~----~~~-------------- 396 (430)
.+++.+.|+++........ . +..+. .+.+... + . ..+...|.+.+|- +.+
T Consensus 274 ~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~-~----~----~~~~~~l~~~~i~~g~~~~~~~~~~~~~~~~~~~ 344 (404)
T PRK14012 274 RDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYV-E----G----ESLIMALKDLAVSSGSACTSASLEPSYVLRALGL 344 (404)
T ss_pred HHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCc-C----H----HHHHHhCCCeEEEchhhhCCCCCCCCHHHHHcCC
Confidence 8888888776522111111 0 11111 2222222 1 1 2344444322211 111
Q ss_pred ----cCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 397 ----IGNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 397 ----~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
..+.+|++++..+|++|++.+++.|+++++++
T Consensus 345 ~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~ 380 (404)
T PRK14012 345 NDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKL 380 (404)
T ss_pred ChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 13689999999999999999999999987653
No 241
>PRK08637 hypothetical protein; Provisional
Probab=99.85 E-value=1.4e-18 Score=168.39 Aligned_cols=307 Identities=8% Similarity=0.085 Sum_probs=187.4
Q ss_pred CCCHHHHHHHHHHHhhcC-C---CCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCC
Q psy14484 74 LTHKPVIKLSEKLSSLTQ-Y---KLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNI 149 (430)
Q Consensus 74 ~~~~~~~~l~~~l~~~~~-~---~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~ 149 (430)
+..+++..+++.+.+..+ . ..++|++|+|+++++..+++++.. +++.|++.+|+|+.+........+
T Consensus 45 G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~--------~gd~Vlv~~P~y~~~~~~~~~~~g- 115 (388)
T PRK08637 45 GIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVD--------QGDTVLLPDHNWGNYKLTFNTRRG- 115 (388)
T ss_pred CCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcC--------CCCEEEEcCCCCccHHHHHHHhcC-
Confidence 333555666666654322 1 225789999999999999988765 668899999999887543221111
Q ss_pred ccchhhhhccCCCeeEeCCC-CCCCCCCCCChhHHHHHHHHHHHHHHHhC-CCCeEEEEEccccccCCCcccCChHHHHH
Q psy14484 150 QSFKEIYTSLLNKTYIITTP-DSRNINKGNSANEIARCAIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKL 227 (430)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~le~~l~~~-~~~~~~vi~ep~v~~~~G~~~~~~~~l~~ 227 (430)
.+.+.++.. ++.+. |++++++.+++. .+...++++.. ++|++| ...+++.+++
T Consensus 116 -----------~~vv~v~~~~~~~~~------------d~~~l~~~~~~~~~~~~~~~~~~~-P~NPTG-~~~s~~~~~~ 170 (388)
T PRK08637 116 -----------AEIVTYPIFDEDGGF------------DTDALKEALQAAYNKGKVIVILNF-PNNPTG-YTPTEKEATA 170 (388)
T ss_pred -----------CEEEEecccCCCCcC------------CHHHHHHHHHhhccCCCEEEEEeC-CCCCCC-CCCCHHHHHH
Confidence 122344432 21222 789998888622 23344455554 688888 7788888999
Q ss_pred HHHHHHh-----cCCEEEEeccccCCCCccccc-c-c-ccCCCCCce--e---eeecccCC-CccccEEEEEc------H
Q psy14484 228 VREICNN-----YNIHLIADEIAVGCGRTGKFF-A-C-EHAEIWPDF--L---CLSKGITG-GYLPLSLVMTT------D 287 (430)
Q Consensus 228 l~~l~~~-----~gi~li~DEv~~g~g~~g~~~-~-~-~~~~~~~d~--~---~~sK~l~g-G~~~ig~~~~~------~ 287 (430)
|.++|++ |++++|+||+|.++...+... . + ...+...++ + ++||.++. | +|+|+++.+ +
T Consensus 171 l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pG-lRlG~~~~~~~~~~~~ 249 (388)
T PRK08637 171 IVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWG-FRVGFITFGTKAGSSQ 249 (388)
T ss_pred HHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcc-cceEEEEEccccCCcH
Confidence 9998875 999999999999885554321 1 1 111222332 2 68997554 6 899999854 5
Q ss_pred HHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH-------HHHHHchhcCCCeeeEeec
Q psy14484 288 KIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKI-------TKALTSLITHPKIINFRQK 360 (430)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l-------~~~l~~l~~~~~~~~~~~~ 360 (430)
++.+.+.. ..........++.+.+++.++.++|+ ++.+.++++++...+ .+.|++..-.+.+...++.
T Consensus 250 ~l~~~~~~--~~~~~~~~~~~~~s~~~q~a~~~~l~---~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~ 324 (388)
T PRK08637 250 TVKEALEK--KVKGLIRSNISNGPHPSQSAVLRALN---SPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFN 324 (388)
T ss_pred HHHHHHHH--HHHHHhhcccCCCCcHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccc
Confidence 66666542 00000111234567788887777764 233444443333333 3333322000122233434
Q ss_pred -ceEEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeecC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 361 -GMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 361 -g~~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~~-~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
|.++++.+. . .. +.++++.|+ ++||.+.+.+ +++|++++. .+++++++++++|.+++.++
T Consensus 325 ~g~~~~~~l~-~----~~--~~~l~~~l~~~~gv~~~~~~~~~iRi~~~~-~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 325 SGYFMCLKLK-G----VD--AEELRVHLLEKYGIGTIALNETDLRIAFSC-VEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred ceEEEEecCC-h----HH--HHHHHHHHhhhcceEEEeccCCceEEEeec-CCHHHHHHHHHHHHHHHHhc
Confidence 455555554 2 11 367888885 6799877643 689998774 78999999999999998754
No 242
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.85 E-value=5.6e-18 Score=162.03 Aligned_cols=326 Identities=15% Similarity=0.134 Sum_probs=190.6
Q ss_pred CEEEecccccccccCCCC--CHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHH
Q psy14484 34 KRYLDAISSWWVNLFGHS--NSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVAL 111 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~--~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al 111 (430)
+.+|+..... ..||-+ +|++.++++++++.+ ....+...++++.+++.+ +.+++++++|+++|+..++
T Consensus 8 ~~~ina~g~~--t~~g~s~~~~~v~~a~~~~~~~~------~~~~~~~~~~~~~~a~~~--g~~~~~~~~g~t~al~~al 77 (363)
T TIGR01437 8 KKVINASGKM--TILGVSTVSDEVADAQKRGAQNY------FEIKELVNKTGEYIANLL--GVEDAVIVSSASAGIAQSV 77 (363)
T ss_pred ceEEECCcEe--ecCCCCCCCHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHhh--CCCeEEEEcCHHHHHHHHH
Confidence 3455543332 566654 889999999987642 234567788999999998 4568999999999999999
Q ss_pred HHHHHhhhhcCC-----------CCCcEEEEEcCCCCCcc---hhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCC
Q psy14484 112 KMSFHYWYNKGF-----------LNKKKFICLQNSYHGET---LGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKG 177 (430)
Q Consensus 112 ~~~~~~~~~~g~-----------~~~~~vl~~~~~yhg~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (430)
+.+... |+ ..++.||+..+.|..+. .......+ ...+++... ...
T Consensus 78 ~al~~~----Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g------------~~~v~v~~~--~~~--- 136 (363)
T TIGR01437 78 AAVITR----GNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGG------------GKVVEAGYA--NEC--- 136 (363)
T ss_pred HHHhcC----CCcchhhcccccccccceEEEECccchhcCCchHHHHHhcC------------CeEEEEcCC--CCC---
Confidence 987641 10 01236777776665431 11111111 111233221 111
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCeEEEE-EccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccc
Q psy14484 178 NSANEIARCAIFDLEILLKKNHNKIAAII-IEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA 256 (430)
Q Consensus 178 ~~~~~~~~~d~~~le~~l~~~~~~~~~vi-~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~ 256 (430)
|++++++++. +++++++ ++. .++.+|...+ +++|.++|++||+++|+|++|+ . ... .
T Consensus 137 ---------d~~~le~ai~---~~t~ai~~v~~-~~~~~g~~~~----~~~i~~~a~~~gi~vivD~a~~-~--~~~--~ 194 (363)
T TIGR01437 137 ---------SAEQLEAAIT---EKTAAILYIKS-HHCVQKSMLS----VEDAAQVAQEHNLPLIVDAAAE-E--DLQ--K 194 (363)
T ss_pred ---------CHHHHHHhcC---hhceEEEEEec-CCCCcCCcCC----HHHHHHHHHHcCCeEEEECCCC-C--chH--H
Confidence 8899999996 4555554 444 4556676666 8999999999999999999996 2 111 0
Q ss_pred cccCCCCCceeeee--cccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh--cCHHH
Q psy14484 257 CEHAEIWPDFLCLS--KGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQ 332 (430)
Q Consensus 257 ~~~~~~~~d~~~~s--K~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~--~~~~~ 332 (430)
.... ..|++++| |.++| ++.|++++++++++.+..... . ....+......+++..++++.+.. .+..+
T Consensus 195 ~~~~--g~D~~~~S~~K~l~g--p~~G~l~~~~~~i~~~~~~~~--~--~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~ 266 (363)
T TIGR01437 195 YYRL--GADLVIYSGAKAIEG--PTSGLVLGKKKYIEWVKLQSK--G--IGRAMKVGKENILGLTAALEQYLSTGKESGA 266 (363)
T ss_pred HHHc--CCCEEEEeCCcccCC--CceEEEEEcHHHHHHHHhccC--C--CcceeccCHHHHHHHHHHHHHHHccCcccHH
Confidence 1112 35777665 88865 468998888887766533000 0 000111111222333334443322 23344
Q ss_pred HHHHHHHHHHHHHHchhcCCCeeeEeecce---EEEEEEeecCCccchhHHHHHHHHHHHCC--cEEee---cCCEEEEe
Q psy14484 333 RISQDMKKITKALTSLITHPKIINFRQKGM---IWAFDVIIEDPEQIETFSKKFFVAALKNE--LLLRP---IGNTVYLM 404 (430)
Q Consensus 333 ~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~a~~~~~~l~~~G--v~~~~---~~~~lR~~ 404 (430)
...+..++++++|+++............+. ...+.+. ....... ..++.+.|.++| |..++ ..+.+|+.
T Consensus 267 ~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~-~~~~g~~--~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~ 343 (363)
T TIGR01437 267 EMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFD-ESELGMT--AADVVQALRQGEPAIYTRGYKANEGIIEID 343 (363)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEe-ccCCCCC--HHHHHHHHhcCCCCEEEeeeeecCCeEEEE
Confidence 444456678888876632211111111111 1122232 1100011 367999998777 66664 24688998
Q ss_pred CCCCCCHHHHHHHHHHHHHH
Q psy14484 405 PPYILNKNEIQHMTSAIFQT 424 (430)
Q Consensus 405 ~~~~~t~e~i~~~~~~l~~~ 424 (430)
+. .++++|++.++++|++.
T Consensus 344 ~~-~~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 344 PR-SVTGGQLDIIVERIREI 362 (363)
T ss_pred ee-cCCHHHHHHHHHHHHHh
Confidence 87 46799999999999875
No 243
>PLN02368 alanine transaminase
Probab=99.84 E-value=4.8e-19 Score=171.18 Aligned_cols=249 Identities=13% Similarity=0.091 Sum_probs=165.9
Q ss_pred CCCHHHHHHHHHHHhhcC--CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCcc
Q psy14484 74 LTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 151 (430)
Q Consensus 74 ~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~ 151 (430)
+..++++.+++++.+..+ .++++|++|+|+++++..+++++..- +++.|++++|+|..+.......+.
T Consensus 108 G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~-------pGd~Vli~~P~Y~~y~~~~~~~g~--- 177 (407)
T PLN02368 108 GLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRG-------EKDGVLVPVPQYPLYSATISLLGG--- 177 (407)
T ss_pred CCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCC-------CCCEEEEeCCCCccHHHHHHHcCC---
Confidence 334677778777776544 46789999999999999999877521 578899999999988655444332
Q ss_pred chhhhhccCCCeeEeCCCC--CCCCCCCCChhHHHHHHHHHHHHHHHhC---CCCeEEEEEccccccCCCcccCChHHHH
Q psy14484 152 FKEIYTSLLNKTYIITTPD--SRNINKGNSANEIARCAIFDLEILLKKN---HNKIAAIIIEPLVQCAGGMIMYDSIYLK 226 (430)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~~~vi~ep~v~~~~G~~~~~~~~l~ 226 (430)
....++... .+.. |+++|++.++.. ..+++++++.. ++|++| ...+.+.++
T Consensus 178 ----------~~v~v~~~~~~~~~~------------d~~~le~~i~~~~~~~~~~k~l~l~n-P~NPTG-~v~s~e~l~ 233 (407)
T PLN02368 178 ----------TLVPYYLEESENWGL------------DVNNLRQSVAQARSKGITVRAMVIIN-PGNPTG-QCLSEANLR 233 (407)
T ss_pred ----------EEEEEecccccCCCC------------CHHHHHHHHHHHhhcCCCeEEEEEEC-CCCCCC-ccCCHHHHH
Confidence 112333221 1122 789999888642 11567555555 677888 667889999
Q ss_pred HHHHHHHhcCCEEEEeccccCCCCccc-cc-c-cccC-CC------CCcee---eeecccC--CCccccEEEEE---cHH
Q psy14484 227 LVREICNNYNIHLIADEIAVGCGRTGK-FF-A-CEHA-EI------WPDFL---CLSKGIT--GGYLPLSLVMT---TDK 288 (430)
Q Consensus 227 ~l~~l~~~~gi~li~DEv~~g~g~~g~-~~-~-~~~~-~~------~~d~~---~~sK~l~--gG~~~ig~~~~---~~~ 288 (430)
+|.++|++||+++|.||+|..+.+.+. .+ . .+.. +. .+.++ +|||.+. .| +|+|++++ +++
T Consensus 234 ~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~G-lRiGy~i~~~~~~~ 312 (407)
T PLN02368 234 EILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECG-QRGGYFEMTNIPPK 312 (407)
T ss_pred HHHHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCc-cceEEEEEeCCCHH
Confidence 999999999999999999998755442 11 1 1110 11 12333 6899984 46 89999984 788
Q ss_pred HHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHH-----------hh-cCHHHHHHHHHHHHHHHHHchhcCCCeee
Q psy14484 289 IYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIF-----------NK-DNILQRISQDMKKITKALTSLITHPKIIN 356 (430)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~-----------~~-~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 356 (430)
+++.+.. . ...+++.+.+++.++.++|+.- ++ .++.+.++++.+.+.+.|+++ +++..
T Consensus 313 li~~~~~------~-~~~~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~---~g~~~ 382 (407)
T PLN02368 313 TVEEIYK------V-ASIALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSC---KNVVC 382 (407)
T ss_pred HHHHHHH------H-hcccCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCeEe
Confidence 8887765 1 2235667778888888877411 10 123445566666666666654 55556
Q ss_pred EeecceEEEEE
Q psy14484 357 FRQKGMIWAFD 367 (430)
Q Consensus 357 ~~~~g~~~~~~ 367 (430)
..++|.|+.|.
T Consensus 383 ~~P~Gafy~~~ 393 (407)
T PLN02368 383 NFTEGAMYSFP 393 (407)
T ss_pred CCCCeeeEecc
Confidence 67888888764
No 244
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.84 E-value=6.5e-18 Score=165.39 Aligned_cols=333 Identities=11% Similarity=0.090 Sum_probs=196.7
Q ss_pred HHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEc
Q psy14484 54 YINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQ 133 (430)
Q Consensus 54 ~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~ 133 (430)
.+.+++.+++..... .+.......+|++.+++.+ +.+++++|+||++|+..++.++.. +++ |+...
T Consensus 58 a~~~a~~~a~~~g~~---~Y~~~~g~~~Lreaia~~~--~~~~vv~t~ggt~A~~~~~~all~--------pGD-Vii~~ 123 (460)
T PRK13238 58 AMSDRQWAAMMRGDE---AYAGSRSYYRLEDAVKDIF--GYPYTIPTHQGRAAEQILFPVLIK--------KGD-VVPSN 123 (460)
T ss_pred hhhHHHHHHHHhCCc---ccCCCCCHHHHHHHHHHHh--CCCcEEECCCHHHHHHHHHHHhCC--------CCC-EEccC
Confidence 467777777755332 1233445667888888888 557899999999999999887754 445 78777
Q ss_pred CCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHH-HHHHHHHHHHHHhCC-CCeEEEEEcccc
Q psy14484 134 NSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA-RCAIFDLEILLKKNH-NKIAAIIIEPLV 211 (430)
Q Consensus 134 ~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~le~~l~~~~-~~~~~vi~ep~v 211 (430)
+.|..+.......+.. .+.++.+..... ...+.+. .-|+++|++.+.+++ +++++|+++. +
T Consensus 124 p~~~~~~~~i~~~G~~-------------~v~v~~~~~~~~---~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~-p 186 (460)
T PRK13238 124 YHFDTTRAHIELNGAT-------------AVDLVIDEALDT---GSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTI-T 186 (460)
T ss_pred CcccchHHHHHHcCCE-------------EEEEeccccccc---cccccccCCcCHHHHHHHHhhcCCCceeEEEEec-C
Confidence 7776554322222221 123332210000 0000000 028899999998642 4789999988 8
Q ss_pred ccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC----CCCc---cc-ccccc----cCCCCCceeeeec-ccCCCcc
Q psy14484 212 QCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVG----CGRT---GK-FFACE----HAEIWPDFLCLSK-GITGGYL 278 (430)
Q Consensus 212 ~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g----~g~~---g~-~~~~~----~~~~~~d~~~~sK-~l~gG~~ 278 (430)
+|++|..+.+.+.+++|.++|++||+++|.|+++.. |... |. ..... ...-..|+.++|- -.+. .
T Consensus 187 ~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~--~ 264 (460)
T PRK13238 187 NNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAM--V 264 (460)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCC--C
Confidence 888776788899999999999999999999997741 1110 10 00000 0011257777762 1121 2
Q ss_pred ccE-EEEEc-HHHHHhhhccCCcccccc-cCCCCCCHHHHH-HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcCCCe
Q psy14484 279 PLS-LVMTT-DKIYNSIYYKNNINIFLH-SHSYSGNPLACC-AALATLEIFNKDNILQRISQDMKKITKALTSLITHPKI 354 (430)
Q Consensus 279 ~ig-~~~~~-~~~~~~~~~~~~~~~~~~-~~t~~~~~~~~~-aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~ 354 (430)
+.| +++++ +++.+.+.. .....+ ..|+++.+..+. |...+|+...++++.....+..++|.+.|++. +++.+
T Consensus 265 ~~GG~i~~~d~~l~~~~~~---~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~ 340 (460)
T PRK13238 265 NIGGLLCFRDEDLFTECRT---LCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYRIGQVEYLGEGLEEA-GVPIQ 340 (460)
T ss_pred cceeEEEcChHHHHHHhhh---cccccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHHHHHHHHHHHHHHHC-CCCeE
Confidence 444 45555 467776654 111112 237777666533 33345553334455555555678888888775 44433
Q ss_pred eeEeecceEEEEEEeecCC--ccchhH-HHHHHHHHH-HCCcEEeec------------------CCEEEEeCCC-CCCH
Q psy14484 355 INFRQKGMIWAFDVIIEDP--EQIETF-SKKFFVAAL-KNELLLRPI------------------GNTVYLMPPY-ILNK 411 (430)
Q Consensus 355 ~~~~~~g~~~~~~~~~~~~--~~~~~~-a~~~~~~l~-~~Gv~~~~~------------------~~~lR~~~~~-~~t~ 411 (430)
. +..|.++.++.. .-. .....+ +..++.+|. +.||.+.|. .+.+||+++. ..|+
T Consensus 341 ~--p~Gg~~v~~d~~-~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~ 417 (460)
T PRK13238 341 T--PAGGHAVFVDAG-KFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQ 417 (460)
T ss_pred c--cCCceEEEEEch-hcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccCCH
Confidence 2 222344444443 210 000111 356777765 559988762 1578998885 3499
Q ss_pred HHHHHHHHHHHHHHH
Q psy14484 412 NEIQHMTSAIFQTFN 426 (430)
Q Consensus 412 e~i~~~~~~l~~~l~ 426 (430)
++++.+.++|++..+
T Consensus 418 ~~~~~~~~~l~~~~~ 432 (460)
T PRK13238 418 SHMDYVAEALKAVKE 432 (460)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998764
No 245
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.84 E-value=9.2e-19 Score=172.03 Aligned_cols=334 Identities=13% Similarity=0.062 Sum_probs=187.2
Q ss_pred CCCCHH-HHHHHHHHHhhccccccCCCCCHHHHHHHHHHHh-hcC--C-C--CCeEEEcCCchHHHHHHHHHHHHhhhhc
Q psy14484 49 GHSNSY-INKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSS-LTQ--Y-K--LGHCFYGSDGASAVEVALKMSFHYWYNK 121 (430)
Q Consensus 49 G~~~p~-v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~--~-~--~~~v~~~~sgteA~~~al~~~~~~~~~~ 121 (430)
|...|+ |.+ +.+.+. ..++..+.+..++.+++++.+.+ ... . . .++|++|+|+++|+..++.++......
T Consensus 111 ~~~~~~~v~e-~~~~~~-~~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ll- 187 (527)
T PRK09275 111 GFDADEFVYE-LVDGII-GDNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLL- 187 (527)
T ss_pred CCCCCHHHHH-HHHHHh-cCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhcC-
Confidence 444444 445 555553 22333444555677777774443 221 1 1 248999999999999998863210000
Q ss_pred CCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC----CCCCCCCCCChhHHHHHHHHHHHHHHHh
Q psy14484 122 GFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP----DSRNINKGNSANEIARCAIFDLEILLKK 197 (430)
Q Consensus 122 g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~d~~~le~~l~~ 197 (430)
.+++.|++++|+|..+......... +...++++ +.++. |+++++++++
T Consensus 188 --~pGD~Vlv~~P~y~~Y~~~~~l~g~-------------~~~~v~v~~~~~~~f~~------------d~~~l~~~~~- 239 (527)
T PRK09275 188 --KAGDKIALMTPIFTPYLEIPELPRY-------------DLEVVHINADEENEWQY------------PDSELEKLRD- 239 (527)
T ss_pred --CCCCEEEEeCCChHHHHHHHHHcCC-------------CeEEEEeecCcccCCCC------------CHHHHHhhcC-
Confidence 1678999999999987543322211 11222222 11222 7788888764
Q ss_pred CCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHh--cCCEEEEeccccCCCCcccccccccC-CCCCceeeeecccC
Q psy14484 198 NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNN--YNIHLIADEIAVGCGRTGKFFACEHA-EIWPDFLCLSKGIT 274 (430)
Q Consensus 198 ~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~--~gi~li~DEv~~g~g~~g~~~~~~~~-~~~~d~~~~sK~l~ 274 (430)
++++++++.. ++|++| ...+++.+++|.++|++ +++++|.||+|..|... ........ ....-+.+|||.++
T Consensus 240 --~~tkai~l~n-P~NPTG-~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~-~~s~~~~~~~~~I~v~SfSK~f~ 314 (527)
T PRK09275 240 --PSIKALFLVN-PSNPPS-VAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD-FRSLFAVLPYNTILVYSFSKYFG 314 (527)
T ss_pred --CCCCEEEEeC-CcCCcC-CCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc-ccCHHHhCCCCEEEEeehhhhcc
Confidence 5677777666 778888 66788999999999964 59999999999977421 11111111 11122347999986
Q ss_pred -CCccccEEEEEcHH-----HHHhhhcc--------------------------CCcccccccCCCCCCHHHHHH-H---
Q psy14484 275 -GGYLPLSLVMTTDK-----IYNSIYYK--------------------------NNINIFLHSHSYSGNPLACCA-A--- 318 (430)
Q Consensus 275 -gG~~~ig~~~~~~~-----~~~~~~~~--------------------------~~~~~~~~~~t~~~~~~~~~a-a--- 318 (430)
.| +|+|+++++++ +++.+... ...+.+....|.+.+.+.+.+ +
T Consensus 315 mtG-~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~ 393 (527)
T PRK09275 315 ATG-WRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFS 393 (527)
T ss_pred CcH-hHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHH
Confidence 46 89999999876 33222000 001122333455556555553 2
Q ss_pred -HHHHHHHhhcCHH----HHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEE-EEeecCCc--cchhH---------HH
Q psy14484 319 -LATLEIFNKDNIL----QRISQDMKKITKALTSLITHPKIINFRQKGMIWAF-DVIIEDPE--QIETF---------SK 381 (430)
Q Consensus 319 -~~~l~~~~~~~~~----~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~-~~~~~~~~--~~~~~---------a~ 381 (430)
.+.|+. .+.+. +.++++.+.+.+.| +.+ +...++.|.|+.+ ++. .-.. ....+ ..
T Consensus 394 ~~all~~--~~~~~~~~~~~~~~Rr~~l~~~L----g~~-~~~~~p~g~fY~~~di~-~~~~~~~g~~f~~~l~~~~~~~ 465 (527)
T PRK09275 394 LFALLDE--EDAYKKAMKDIIRRRYKALYEGL----GLP-EPEDPNNAAYYTLIDLE-EWAEKNYGKEFADYLKKNYSPV 465 (527)
T ss_pred HHHHHhC--chHHHHHHHHHHHHHHHHHHHHc----CCC-CcCCCCCeeEEEEEEhH-HhhhhccCchhhhhhhccCCHH
Confidence 222321 12222 22333333333332 111 1123455666554 332 1000 00000 24
Q ss_pred HHHHHHHHC-CcEEeecC------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 382 KFFVAALKN-ELLLRPIG------NTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 382 ~~~~~l~~~-Gv~~~~~~------~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+++.+|.++ ||.+.|+. +++|+++. ..+++++.++.++|++.+++.
T Consensus 466 ~f~~~Ll~e~gV~v~PG~~Fg~~~~~vRis~a-~~~~~~~~~~~~rl~~~l~~y 518 (527)
T PRK09275 466 DLLFRLAEETGVVLLPGGGFGGPEWSVRVSLA-NLNEEDYAKIGKAIRKLLDEY 518 (527)
T ss_pred HHHHHHHhcCCEEEeCchhhCCCCCeEEEEEe-cCCHHHHHHHHHHHHHHHHHH
Confidence 677777654 99998862 47888653 358899999999999988753
No 246
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.83 E-value=7.4e-18 Score=163.97 Aligned_cols=321 Identities=12% Similarity=0.051 Sum_probs=190.2
Q ss_pred CCHHHHHHHHHHH-hhcccc---ccCCCCCHHHHHHHH----HHHhhcCCCCCeE-EEcCCchHHHHHHHHHHHHhhhhc
Q psy14484 51 SNSYINKALKNQL-NKLEHV---MLSNLTHKPVIKLSE----KLSSLTQYKLGHC-FYGSDGASAVEVALKMSFHYWYNK 121 (430)
Q Consensus 51 ~~p~v~~a~~~~~-~~~~~~---~~~~~~~~~~~~l~~----~l~~~~~~~~~~v-~~~~sgteA~~~al~~~~~~~~~~ 121 (430)
-+|++++++...+ .+++.. ......++...++++ .++++++ .+.+ ++++||+.|+..++.++..
T Consensus 40 ~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g--~~~alv~~~SG~~A~~~~l~al~~----- 112 (416)
T PRK13034 40 TSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFG--CDYANVQPHSGSQANGAVYLALLK----- 112 (416)
T ss_pred CCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhC--CCceEEecCCcHHHHHHHHHHhcC-----
Confidence 3899999999985 655432 111112567778887 9999994 4566 4568999999999988754
Q ss_pred CCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCC
Q psy14484 122 GFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNK 201 (430)
Q Consensus 122 g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~ 201 (430)
+++.|++.+.++.+........+ +. ........++.+... ...|++++++.++. .+
T Consensus 113 ---~GD~Vl~~~~~~~~~~~~g~~~~----~~------~~~~~~~~~~~~~~~---------~~~d~~~le~~l~~--~~ 168 (416)
T PRK13034 113 ---PGDTILGMSLSHGGHLTHGAKVS----LS------GKWYNAVQYGVDRLT---------GLIDYDEVEELAKE--HK 168 (416)
T ss_pred ---CCCEEEEcCccceeeeecCCcce----ec------cceeeeEEccccccc---------CCcCHHHHHHHHhh--cC
Confidence 66788877766644221111110 00 000000111110000 01288899988864 24
Q ss_pred eEEEEE-ccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCCcc
Q psy14484 202 IAAIII-EPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYL 278 (430)
Q Consensus 202 ~~~vi~-ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~~ 278 (430)
+++|++ ++ ++ |...+ +.+|.++|++||+++|+|++|+ +|..+........+ ..|++ +++|+++|+
T Consensus 169 ~klVi~~~~-~~---g~~~d----l~~l~~la~~~g~~livD~Aha-~G~~~~g~~~~~~~-~~Di~~~s~~K~l~g~-- 236 (416)
T PRK13034 169 PKLIIAGFS-AY---PRELD----FARFREIADEVGALLMVDMAHI-AGLVAAGEHPNPFP-HAHVVTTTTHKTLRGP-- 236 (416)
T ss_pred CeEEEECCC-cc---ccccC----HHHHHHHHHHcCCEEEEeCccc-ccCcccCCCCCCCC-CceEEEEeCcccCCCC--
Confidence 577777 44 43 43445 8899999999999999999987 44443221111112 35766 466999764
Q ss_pred ccEEEEEcHH-HHHhhhccCCcccccccC-CCCCCHHHHHHHH-HHHHHHhh--cCHHHHHHHHHHHHHHHHHchhcCCC
Q psy14484 279 PLSLVMTTDK-IYNSIYYKNNINIFLHSH-SYSGNPLACCAAL-ATLEIFNK--DNILQRISQDMKKITKALTSLITHPK 353 (430)
Q Consensus 279 ~ig~~~~~~~-~~~~~~~~~~~~~~~~~~-t~~~~~~~~~aa~-~~l~~~~~--~~~~~~~~~~~~~l~~~l~~l~~~~~ 353 (430)
.-|+++++++ +.+.++. ....+ +....+...+++. +.++.++. +++.+++.++.++|+++|+++ +.+.
T Consensus 237 ~GG~v~~~~~~~~~~~~~------~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~~ 309 (416)
T PRK13034 237 RGGMILTNDEEIAKKINS------AVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER-GYDL 309 (416)
T ss_pred CCeEEEECcHHHHHHHHh------hcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc-CCEe
Confidence 2366677654 4343432 11111 1112233333333 33444322 345788999999999999876 3332
Q ss_pred eeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-----------CCEEEEeCCC----CCCHHHHHHHH
Q psy14484 354 IINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----------GNTVYLMPPY----ILNKNEIQHMT 418 (430)
Q Consensus 354 ~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-----------~~~lR~~~~~----~~t~e~i~~~~ 418 (430)
... .....+..+.+. +... . ...+.+.|.+.||.+.+. ...+|++++. .++++|+++++
T Consensus 310 ~~~-~~~t~i~~v~~~-~~~~--~--~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~ 383 (416)
T PRK13034 310 VSG-GTDNHLLLVDLR-PKGL--S--GKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIA 383 (416)
T ss_pred ccC-CCCCcEEEEEcC-CCCC--C--HHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHH
Confidence 211 123445555554 3221 1 245667888899998741 2479999888 77899999999
Q ss_pred HHHHHHHHH
Q psy14484 419 SAIFQTFNE 427 (430)
Q Consensus 419 ~~l~~~l~~ 427 (430)
+.|++++.+
T Consensus 384 ~~l~~~~~~ 392 (416)
T PRK13034 384 NWILDVLDD 392 (416)
T ss_pred HHHHHHHhc
Confidence 999988763
No 247
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.83 E-value=1.1e-18 Score=171.27 Aligned_cols=337 Identities=12% Similarity=0.046 Sum_probs=183.6
Q ss_pred CCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHH-HHHhhcC---CCCC--eEEEcCCchHHHHHHHHHHHHhhhhc
Q psy14484 48 FGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSE-KLSSLTQ---YKLG--HCFYGSDGASAVEVALKMSFHYWYNK 121 (430)
Q Consensus 48 lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~-~l~~~~~---~~~~--~v~~~~sgteA~~~al~~~~~~~~~~ 121 (430)
.+...|+++.++.+.+.. .++..+....+..+++.+ .+.+... ...+ +|++|+|+++|+..++.++......
T Consensus 104 p~~~~~~~~~~~~~~~~~-~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~ll- 181 (521)
T TIGR03801 104 LGFDPDAFLYEMCDGIIG-DNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANELL- 181 (521)
T ss_pred CCCCCCHHHHHHHHHhhc-CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhhcC-
Confidence 345566777777766532 222223344455556554 4444322 1233 8999999999999988763210000
Q ss_pred CCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC-------CCCCCCCChhHHHHHHHHHHHHH
Q psy14484 122 GFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS-------RNINKGNSANEIARCAIFDLEIL 194 (430)
Q Consensus 122 g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~d~~~le~~ 194 (430)
.+++.|++.+|+|..+......... ....+.++.+.. ++. |.++++++
T Consensus 182 --~pGD~Vlv~~P~y~~y~~~~~l~~~-----------g~~vv~i~~~~~~~~g~~~~~~------------d~~~l~~~ 236 (521)
T TIGR03801 182 --KKGDKIALMTPIFTPYLEIPELPRY-----------DFEVVRIKADEMTEDGTHTWQY------------PDKELEKL 236 (521)
T ss_pred --CCCCEEEEeCCCcHHHHHHHHHhcC-----------CcEEEEeecccccccccccCCC------------CHHHHHHh
Confidence 1678999999999887443222110 111122222110 111 67888876
Q ss_pred HHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhc--CCEEEEeccccCCCCcccccccccC-CCCCceeeeec
Q psy14484 195 LKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNY--NIHLIADEIAVGCGRTGKFFACEHA-EIWPDFLCLSK 271 (430)
Q Consensus 195 l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~--gi~li~DEv~~g~g~~g~~~~~~~~-~~~~d~~~~sK 271 (430)
++ ++++++++.. ++|++| ...+.+.+++|.++|++| ++++|.||+|..|... ........ ....-+.+|||
T Consensus 237 ~~---~~~kai~l~n-P~NPTG-~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~-~~sl~~~~~~~vI~v~SfSK 310 (521)
T TIGR03801 237 RD---PSIKALFVVN-PSNPPS-VAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDD-FRSLFAELPYNTIGVYSFSK 310 (521)
T ss_pred cC---CCCcEEEEeC-CCCCCC-CCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhccc-ccchhhhCCCCEEEEEcchh
Confidence 64 4677777655 678888 567788899999999987 9999999999877431 11111111 11112347999
Q ss_pred ccC-CCccccEEEEEcHH-----HHHh--------hhcc------------------CCcccccccCCCCCCHHHHH---
Q psy14484 272 GIT-GGYLPLSLVMTTDK-----IYNS--------IYYK------------------NNINIFLHSHSYSGNPLACC--- 316 (430)
Q Consensus 272 ~l~-gG~~~ig~~~~~~~-----~~~~--------~~~~------------------~~~~~~~~~~t~~~~~~~~~--- 316 (430)
.++ .| +|+|+++++++ +++. +... ...+.+....|.+.+.+.+.
T Consensus 311 ~fg~~G-~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~a 389 (521)
T TIGR03801 311 YFGATG-WRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMA 389 (521)
T ss_pred hccCch-hhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHH
Confidence 986 46 89999999864 2211 1000 00011222234444444333
Q ss_pred --HHHHHHHHHhhcCHHHHH----HHHHHHHHHHHHchhcCCCeeeEeecceEEE-EEEeecCCc--cchhH--------
Q psy14484 317 --AALATLEIFNKDNILQRI----SQDMKKITKALTSLITHPKIINFRQKGMIWA-FDVIIEDPE--QIETF-------- 379 (430)
Q Consensus 317 --aa~~~l~~~~~~~~~~~~----~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~-~~~~~~~~~--~~~~~-------- 379 (430)
++.+.++. .+.+.+.. +++.+.+.+.| +.+ +...++.|.++. +++. .-.. ...+|
T Consensus 390 l~a~~all~~--~~~y~~~~~~~~~~R~~~l~~~L----g~~-~~~~~~~g~~Y~~~di~-~~~~~~~~~~f~~~l~~~~ 461 (521)
T TIGR03801 390 LFSLFALMDK--ENAYKAETKDICRRREKLLFRGL----GLP-LQEDPNDVAYYTLIDLE-EWAEKNYGEEFSSYLKKNY 461 (521)
T ss_pred HHHHHHHhcc--chhHHHHHHHHHHHHHHHHHHhc----CCC-CcCCCCCeEEEEEeehH-HHHHHhcchHHHHHHhccC
Confidence 23333331 12233322 33332332222 111 112334555544 4443 2100 00011
Q ss_pred -HHHHHHHHHH-CCcEEeecC------CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 380 -SKKFFVAALK-NELLLRPIG------NTVYLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 380 -a~~~~~~l~~-~Gv~~~~~~------~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
..+++.+|.+ .||.+.|+. +++|++++ ..+++++.++.++|++.+++
T Consensus 462 ~~~~~~~~L~~e~gV~v~PG~~Fg~~~~~vRisla-~l~~~~~~~~~~rl~~~~~~ 516 (521)
T TIGR03801 462 SPVDVLFRLAEETGIVLLPGGGFGGPEWSVRVSLA-NLNEYDYAEIGRAIRKILDE 516 (521)
T ss_pred CHHHHHHHHHHhCCEEEeCchhcCCCCCeEEEEec-CCCHHHHHHHHHHHHHHHHH
Confidence 2457777664 499999862 46888653 36889999999999998865
No 248
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.82 E-value=5.5e-18 Score=162.02 Aligned_cols=291 Identities=13% Similarity=0.034 Sum_probs=174.6
Q ss_pred CCCHHHHHHHHHHHhhcCCC--CCeEEEcCCchHHHHHHHHHHHHhhhhc----C-CCCCcEEEEEcCCCCCcchhhhcc
Q psy14484 74 LTHKPVIKLSEKLSSLTQYK--LGHCFYGSDGASAVEVALKMSFHYWYNK----G-FLNKKKFICLQNSYHGETLGALAV 146 (430)
Q Consensus 74 ~~~~~~~~l~~~l~~~~~~~--~~~v~~~~sgteA~~~al~~~~~~~~~~----g-~~~~~~vl~~~~~yhg~~~~~~~~ 146 (430)
...+..++++++++++++.+ .++++||+||++|+..++++++.....+ + .++++.+|+.+..+|.........
T Consensus 35 ~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~ 114 (345)
T cd06450 35 AATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAY 114 (345)
T ss_pred hhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHH
Confidence 33466778888888888753 3479999999999999999887531110 0 012344556666666553222221
Q ss_pred CCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhC---CCCeEEEEEccccccCCCcccCChH
Q psy14484 147 TNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKN---HNKIAAIIIEPLVQCAGGMIMYDSI 223 (430)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~~~vi~ep~v~~~~G~~~~~~~ 223 (430)
. ......++.+..... |+++|++++.+. ..++.++++.. +++++|...+
T Consensus 115 ~------------g~~~~~v~~~~~~~~------------d~~~l~~~i~~~~~~~~~~~~v~~~~-~~~~tG~~~~--- 166 (345)
T cd06450 115 L------------DVKVRLVPVDEDGRM------------DPEALEAAIDEDKAEGLNPIMVVATA-GTTDTGAIDP--- 166 (345)
T ss_pred H------------hcCeEEeeeCCCCCc------------CHHHHHHHHHHHHHCCCCcEEEEEec-ccCCCCCCCC---
Confidence 1 123344444322222 889999988751 12566676666 7778887766
Q ss_pred HHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCC-CCcee--eeecccCCCccccEEEEEcHHHHHhhhccCCcc
Q psy14484 224 YLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI-WPDFL--CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNIN 300 (430)
Q Consensus 224 ~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~-~~d~~--~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~ 300 (430)
+++|.++|+++|+++|+|++|+++.............. ..|.+ +++|.++++ .++|+++.+
T Consensus 167 -~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p-~g~g~~~~~-------------- 230 (345)
T cd06450 167 -LEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVP-LGCSAVLVR-------------- 230 (345)
T ss_pred -HHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCC-cchHHHHHH--------------
Confidence 99999999999999999999985422111000000111 35654 466977655 355554333
Q ss_pred cccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHH
Q psy14484 301 IFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFS 380 (430)
Q Consensus 301 ~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a 380 (430)
.+++.+++..+....-++..++..++.+++.+.|+++.....+ ....+.++.|.+. +... .....
T Consensus 231 -----------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~~~~~iv~f~~~-~~~~-~~~~~ 295 (345)
T cd06450 231 -----------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELL--GEPNLSLVCFRLK-PSVK-LDELN 295 (345)
T ss_pred -----------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe--cCCceeEEEEEEC-Ccch-hhHHH
Confidence 2222233333321112345566777888888888765222111 1234566667665 3100 01113
Q ss_pred HHHHHHHHHCCcEEeec-----CCEEEEeCCCCC-CHHHHHHHHHHHHH
Q psy14484 381 KKFFVAALKNELLLRPI-----GNTVYLMPPYIL-NKNEIQHMTSAIFQ 423 (430)
Q Consensus 381 ~~~~~~l~~~Gv~~~~~-----~~~lR~~~~~~~-t~e~i~~~~~~l~~ 423 (430)
.++.+.|.++|+++.+. +.++|++++..+ |++|++++++.|++
T Consensus 296 ~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 296 YDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred HHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 57889999996554432 368999999875 99999999999875
No 249
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.82 E-value=1.1e-17 Score=163.25 Aligned_cols=332 Identities=14% Similarity=0.077 Sum_probs=191.8
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHH-hhcccc---ccCCCCCH---HHHH-HHHHHHhhcCCCCCeEEEcCCchH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQL-NKLEHV---MLSNLTHK---PVIK-LSEKLSSLTQYKLGHCFYGSDGAS 105 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~-~~~~~~---~~~~~~~~---~~~~-l~~~l~~~~~~~~~~v~~~~sgte 105 (430)
+++|.+..+- ++ -+|+|++++.+.+ ..+... .......+ ..++ .++.++++++.+...+++ +||++
T Consensus 19 ~~~~~~~~~~--~~---~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v~~-~sgt~ 92 (402)
T cd00378 19 RETLELIASE--NF---TSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYANVQP-HSGSQ 92 (402)
T ss_pred HhCeeeeccC--Cc---CCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCceeeec-CCcHH
Confidence 4577776652 22 3899999998765 232111 11111222 2233 345567788755444444 47899
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC---CCCCCCCChhH
Q psy14484 106 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS---RNINKGNSANE 182 (430)
Q Consensus 106 A~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 182 (430)
|+..+++.+.. ++++|++.++.|.++...... .. ..........++++.+ +..
T Consensus 93 a~~~~l~~l~~--------~Gd~Vl~~~~~~~~~~~~~~~-~~-------~~~~g~~~~~~~~~~~~~~~~i-------- 148 (402)
T cd00378 93 ANLAVYFALLE--------PGDTIMGLDLSHGGHLTHGSF-TK-------VSASGKLFESVPYGVDPETGLI-------- 148 (402)
T ss_pred HHHHHHHHhcC--------CCCEEEEecCccCcccccccc-cc-------ccccceeEEEecCCcCcccCCc--------
Confidence 99999988764 567899999998765322110 00 0000111223333321 222
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccc-cCCCCccc-ccccccC
Q psy14484 183 IARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIA-VGCGRTGK-FFACEHA 260 (430)
Q Consensus 183 ~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~-~g~g~~g~-~~~~~~~ 260 (430)
|++++++.+.+ .+++++++.+ .. .|...+ +++|.++|+++|+++|+||+| .|+...|. ...+.
T Consensus 149 ----d~~~l~~~i~~--~~~~~v~~~~-~~--~~~~~~----~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~-- 213 (402)
T cd00378 149 ----DYDALEKMALE--FKPKLIVAGA-SA--YPRPID----FKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP-- 213 (402)
T ss_pred ----CHHHHHHHHHh--CCCCEEEecC-cc--cCCCcC----HHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--
Confidence 88999999864 3455555533 22 233444 999999999999999999996 34422231 11111
Q ss_pred CCCCcee--eeecccCCCccccEEEEEcH-HHHHhhhccCCcccccccCCCCC-CHHHHHHHHHHHHHH-h--hcCHHHH
Q psy14484 261 EIWPDFL--CLSKGITGGYLPLSLVMTTD-KIYNSIYYKNNINIFLHSHSYSG-NPLACCAALATLEIF-N--KDNILQR 333 (430)
Q Consensus 261 ~~~~d~~--~~sK~l~gG~~~ig~~~~~~-~~~~~~~~~~~~~~~~~~~t~~~-~~~~~~aa~~~l~~~-~--~~~~~~~ 333 (430)
..|++ +++|+++| .+.|++++++ ++.+.+.. ......++. ......++..++... + .++..++
T Consensus 214 --~~dv~~~s~sK~l~G--~~gg~i~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~ 283 (402)
T cd00378 214 --GADVVTTTTHKTLRG--PRGGLILTRKGELAKKINS------AVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQ 283 (402)
T ss_pred --CCcEEEeccccCCCC--CCceEEEeccHHHHHHHHH------HhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 34655 67899944 6889999876 88777654 111111221 222232323333322 1 1345667
Q ss_pred HHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEee-----------cCCEEE
Q psy14484 334 ISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP-----------IGNTVY 402 (430)
Q Consensus 334 ~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~-----------~~~~lR 402 (430)
+.++.+++.+.|+++ ...... .+..+.++++.+. +... . ...+.+.|.++||.+.+ ....+|
T Consensus 284 ~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~v~v~~~-~~~~-~---~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lR 356 (402)
T cd00378 284 VVENAKALAEALKER-GFKVVS-GGTDNHLVLVDLR-PKGI-T---GKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIR 356 (402)
T ss_pred HHHHHHHHHHHHHhC-CCeEee-cCCCCeEEEEeCC-ccCC-C---HHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeE
Confidence 788888888888765 222211 1123556666654 3211 1 24566778888999963 125799
Q ss_pred EeCCCC----CCHHHHHHHHHHHHHHHHH
Q psy14484 403 LMPPYI----LNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 403 ~~~~~~----~t~e~i~~~~~~l~~~l~~ 427 (430)
++++.. +++++++++++.|++++.+
T Consensus 357 i~~~~~~~~~~~~~di~~~~~~l~~~~~~ 385 (402)
T cd00378 357 IGTPAMTTRGMGEEEMEEIADFIARALKD 385 (402)
T ss_pred ecCHHHHHhCCCHHHHHHHHHHHHHHHhc
Confidence 988764 4799999999999997753
No 250
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.82 E-value=8.2e-18 Score=152.13 Aligned_cols=330 Identities=15% Similarity=0.161 Sum_probs=192.1
Q ss_pred EecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHH
Q psy14484 37 LDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFH 116 (430)
Q Consensus 37 lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~ 116 (430)
+||.|.++. | .+|++++++.++-.... ..++.++...+++++++++++ .+.++|++|||+||..++...++
T Consensus 2 ~~f~SDn~~---g-~~~~m~eam~~a~~~~~---~~YG~D~~~~~~e~~~ae~~g--~~a~~Fv~sGT~aN~lal~~~~~ 72 (342)
T COG2008 2 IDFRSDNVA---G-PTPEMREALAAANAVGD---DVYGEDPTTNALEQRIAELFG--KEAALFVPSGTQANQLALAAHCQ 72 (342)
T ss_pred CccccCccC---C-CCHHHHHHHHhccccCC---CCCCCCHHHHHHHHHHHHHhC--CceEEEecCccHHHHHHHHHhcC
Confidence 577776443 2 78999999998743221 235667788899999999995 38999999999999999998875
Q ss_pred hhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCC-CCCCCCCCCCChhHHHHHHHHHHHHHH
Q psy14484 117 YWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITT-PDSRNINKGNSANEIARCAIFDLEILL 195 (430)
Q Consensus 117 ~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~le~~l 195 (430)
+...|+. ...-|-++..+- . +.+ ......++. +...... ++++++..+
T Consensus 73 --------~~~~vi~-~~~aHi~~~E~G---a-~~~-------~~~~~~~~~~~g~~Gkl-----------t~e~v~~~i 121 (342)
T COG2008 73 --------PGESVIC-HETAHIYTDECG---A-PEF-------FGGGQKLPIVPGADGKL-----------TPEDVEAAI 121 (342)
T ss_pred --------CCCeEEE-eccccceecccC---c-HHH-------HcCCceeccCCCCCCCc-----------CHHHHHHhh
Confidence 3344443 334443322111 1 100 111112222 2122222 788888877
Q ss_pred HhC---CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC--CCCcccccccccCCCCCceeeee
Q psy14484 196 KKN---HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVG--CGRTGKFFACEHAEIWPDFLCLS 270 (430)
Q Consensus 196 ~~~---~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g--~g~~g~~~~~~~~~~~~d~~~~s 270 (430)
... ...+.+++.+. -.+++| .++|.++|++|.++|++||+.|++|-+--. ....| -+...+.-..|.++|+
T Consensus 122 ~~~d~~~~~~~~~~~e~-~~te~G-tVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg--~~~~~~~~~~D~v~~~ 197 (342)
T COG2008 122 RPDDIHHAPTPLAVLEN-TATEGG-TVYPLDELEAISAVCKEHGLPLHMDGARLANALVALG--VALKTIKSYVDSVSFC 197 (342)
T ss_pred cCCCcccCCCceEEEee-ccCCCc-eecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcC--CCHHHHHhhCCEEEEe
Confidence 742 12345555555 455778 778889999999999999999999955210 00011 0111122236777655
Q ss_pred cccCCCccccEEEE-EcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhc-CHHH--HHHHHHHHHHHHHH
Q psy14484 271 KGITGGYLPLSLVM-TTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD-NILQ--RISQDMKKITKALT 346 (430)
Q Consensus 271 K~l~gG~~~ig~~~-~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~-~~~~--~~~~~~~~l~~~l~ 346 (430)
-+-++| +|+++++ ++.++.+.+.. . ....++-+.-.-+-.+.....|+ +. .... +..+++++|.++++
T Consensus 198 ~tK~g~-~~~gAiv~gn~~~~~~a~~---~-rK~~Ggl~~k~r~laA~~~~~l~---~~~~~~~~~Han~mA~~La~~~~ 269 (342)
T COG2008 198 LTKGGG-APVGAIVFGNRDFAKRARR---W-RKRAGGLMRKARFLAAQGLYALE---DDVWRLAADHANAMAARLAEGLE 269 (342)
T ss_pred cccCCc-ceeeeEEEcCHHHHHHHHH---H-HHHhcccHhhhhHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHhhh
Confidence 333344 6888665 57777766543 0 11233333222232333333333 22 1222 22333667777776
Q ss_pred chhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 347 SLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 347 ~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
.....+. ..+.+.+++.+.++ ... . -+......+...|+...+.+..+||..+..++++++++++..+++.+
T Consensus 270 ~~~G~~~--~~~~~tN~vf~~l~-~~~---i-~~l~~~~~~~~~~~~~~~~~~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 270 AKPGVKL--AFPVETNMVFVRLP-ESA---I-EALRLAGALFYRGVLIGAHGEIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred hcCCcee--ccCCcccEEEEECC-hHH---H-HHHHhhchhheeeeeccCCCceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 4422222 22367788877776 310 0 02233444555566655444578999999999999999999988764
No 251
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.81 E-value=1.8e-17 Score=158.98 Aligned_cols=291 Identities=15% Similarity=0.100 Sum_probs=181.5
Q ss_pred CCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchh
Q psy14484 75 THKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKE 154 (430)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~ 154 (430)
..+...++++.+++.++ .+++++++||++|+..+++.+... +++.|++..++|++........
T Consensus 16 ~~~~~~~~~~~la~~~~--~~~~~~~~sgt~al~~~l~~l~~~-------~gd~vl~~~~~~~~~~~~~~~~-------- 78 (352)
T cd00616 16 LGPKVREFEKAFAEYLG--VKYAVAVSSGTAALHLALRALGIG-------PGDEVIVPSFTFVATANAILLL-------- 78 (352)
T ss_pred CCHHHHHHHHHHHHHhC--CCeEEEECCHHHHHHHHHHHcCCC-------CCCEEEeCCcchHHHHHHHHHc--------
Confidence 35677899999999995 468999999999999999877321 5678999888888653322221
Q ss_pred hhhccCCCeeEeCCCC-CCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHH
Q psy14484 155 IYTSLLNKTYIITTPD-SRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICN 233 (430)
Q Consensus 155 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~ 233 (430)
..+..+++.+. .+.. |++++++.++ +++++|++.+ + +|...+ +++|.++|+
T Consensus 79 -----g~~~~~~~~~~~~~~~------------d~~~l~~~i~---~~~~~v~~~~-~---~G~~~~----~~~i~~l~~ 130 (352)
T cd00616 79 -----GATPVFVDIDPDTYNI------------DPELIEAAIT---PRTKAIIPVH-L---YGNPAD----MDAIMAIAK 130 (352)
T ss_pred -----CCeEEEEecCCCcCCc------------CHHHHHHhcC---cCCeEEEEEC-C---CCCcCC----HHHHHHHHH
Confidence 12233444332 1221 7888988884 4677777654 3 565555 899999999
Q ss_pred hcCCEEEEeccccCCCCcccccccccCCCCCceeeee----cccCCCccccEEEEEc-HHHHHhhhc---cCCccc----
Q psy14484 234 NYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS----KGITGGYLPLSLVMTT-DKIYNSIYY---KNNINI---- 301 (430)
Q Consensus 234 ~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s----K~l~gG~~~ig~~~~~-~~~~~~~~~---~~~~~~---- 301 (430)
++|+++|+|++|+ +|... .....+...|+.++| |.+++| ..|+++.+ +++.+.+.. .+....
T Consensus 131 ~~~i~li~D~a~~-~g~~~---~~~~~~~~~d~~~~S~~~~K~~~~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (352)
T cd00616 131 RHGLPVIEDAAQA-LGATY---KGRKVGTFGDAGAFSFHPTKNLTTG--EGGAVVTNDEELAERARLLRNHGRDRDRFKY 204 (352)
T ss_pred HcCCeEEEECCCC-CCCeE---CCEEcccCcceeEEcCCCCCCCccc--CceEEEECCHHHHHHHHHHHHcCCCCCCCcc
Confidence 9999999999997 43221 111123335666665 988654 45777775 466554432 010000
Q ss_pred --ccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcCCCeeeEe---ecceEEEEEEeecCCccc
Q psy14484 302 --FLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFR---QKGMIWAFDVIIEDPEQI 376 (430)
Q Consensus 302 --~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~---~~g~~~~~~~~~~~~~~~ 376 (430)
...+.++..+++.++.+...++.+ +...++.+++.+++++.|+++.....+.... ....++.+.+. .... .
T Consensus 205 ~~~~~~~~~~~~~~~aa~~~~~l~~~--~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~-~ 280 (352)
T cd00616 205 EHEILGYNYRLSEIQAAIGLAQLEKL--DEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLD-PEAG-E 280 (352)
T ss_pred ccceeeeccCcCHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEEC-CcCC-C
Confidence 011122334555555555444433 4466777888999999988763332221111 12234444443 2101 1
Q ss_pred hhHHHHHHHHHHHCCcEEeec----------------------------CCEEEEeCCCCCCHHHHHHHHHHHH
Q psy14484 377 ETFSKKFFVAALKNELLLRPI----------------------------GNTVYLMPPYILNKNEIQHMTSAIF 422 (430)
Q Consensus 377 ~~~a~~~~~~l~~~Gv~~~~~----------------------------~~~lR~~~~~~~t~e~i~~~~~~l~ 422 (430)
. ...+.+.|.++||.+... .+.+|+.++..+|++|++.++++|+
T Consensus 281 ~--~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 281 S--RDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred C--HHHHHHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 1 367999999999966521 1479999999999999999998874
No 252
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.81 E-value=5e-17 Score=159.24 Aligned_cols=333 Identities=14% Similarity=0.114 Sum_probs=190.7
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHh-hcccccc-CCC--CCHHHHH----HHHHHHhhcCCCCCeEEEcCCchH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLN-KLEHVML-SNL--THKPVIK----LSEKLSSLTQYKLGHCFYGSDGAS 105 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~-~~~~~~~-~~~--~~~~~~~----l~~~l~~~~~~~~~~v~~~~sgte 105 (430)
+.++++.++ .++ -+|+|++++...+. ....... ..+ ..+.... .++.+++.++.....+++ +||++
T Consensus 25 ~~~~~l~~~--~n~---~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~i~~-~sgt~ 98 (416)
T PRK00011 25 EEHIELIAS--ENF---VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYANVQP-HSGSQ 98 (416)
T ss_pred hcCeeeecc--cCc---CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceeeec-CCchH
Confidence 566777776 232 48999999877653 2211111 011 1122223 344788888766555554 56899
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC-CCCCCCCCChhHHH
Q psy14484 106 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD-SRNINKGNSANEIA 184 (430)
Q Consensus 106 A~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 184 (430)
|+..++..+.. +++.|++.+++|.++......... .........++.+. ...
T Consensus 99 al~~~l~~l~~--------~gd~Vl~~~~~~~~~~~~~~~~~~--------~~~g~~~~~~~~~~~~~~----------- 151 (416)
T PRK00011 99 ANAAVYFALLK--------PGDTILGMDLAHGGHLTHGSPVNF--------SGKLYNVVSYGVDEETGL----------- 151 (416)
T ss_pred HHHHHHHHhcC--------CCCEEEEeccccCCcccccccccc--------ccceeeEeecCcCcccCC-----------
Confidence 99998887753 567899988888654221110000 00001112233221 111
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-CCCCcccccccccCCCC
Q psy14484 185 RCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-GCGRTGKFFACEHAEIW 263 (430)
Q Consensus 185 ~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~-g~g~~g~~~~~~~~~~~ 263 (430)
.|++++++.+++ .+++++++.. ++.|...+ +++|.++|+++|+++|+|++|. |+...|.. .. ..+ .
T Consensus 152 -~d~~~l~~~i~~--~~~k~v~~~~---~~~~~~~~----~~~I~~la~~~~~~livD~a~~~g~~~~g~~-~~-~~~-~ 218 (416)
T PRK00011 152 -IDYDEVEKLALE--HKPKLIIAGA---SAYSRPID----FKRFREIADEVGAYLMVDMAHIAGLVAAGVH-PS-PVP-H 218 (416)
T ss_pred -cCHHHHHHHHHh--cCCCEEEECC---CcCCCccC----HHHHHHHHHHcCCEEEEECcchhcccccCcc-CC-CCC-C
Confidence 288999999974 2455666532 22343445 8999999999999999999985 32111210 11 112 3
Q ss_pred Ccee--eeecccCCCccccEEEEEc-HHHHHhhhccCCcccccccCCCCC-CHHHHHHHHHHH-HHHhh--cCHHHHHHH
Q psy14484 264 PDFL--CLSKGITGGYLPLSLVMTT-DKIYNSIYYKNNINIFLHSHSYSG-NPLACCAALATL-EIFNK--DNILQRISQ 336 (430)
Q Consensus 264 ~d~~--~~sK~l~gG~~~ig~~~~~-~~~~~~~~~~~~~~~~~~~~t~~~-~~~~~~aa~~~l-~~~~~--~~~~~~~~~ 336 (430)
.|++ +++|+++| .+.|+++++ +++.+.+.. ......++. ....+++...++ +.+++ ++..+++++
T Consensus 219 ~di~~~S~~K~l~g--~~gg~i~~~~~~~~~~l~~------~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~ 290 (416)
T PRK00011 219 ADVVTTTTHKTLRG--PRGGLILTNDEELAKKINS------AVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVK 290 (416)
T ss_pred CcEEEecCCcCCCC--CCceEEEeCCHHHHHHHHH------HhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 4655 57799854 578999995 688777654 111111221 222333322333 33221 446677888
Q ss_pred HHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEee----c-------CCEEEEeC
Q psy14484 337 DMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP----I-------GNTVYLMP 405 (430)
Q Consensus 337 ~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~----~-------~~~lR~~~ 405 (430)
+++++++.|+++ ...... -.....++++.+. +... . ...+.+.|.++||.+.. . ...+|+..
T Consensus 291 ~~~~l~~~L~~~-g~~~~~-~~~~~~~~~i~~~-~~~~--~--~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~ 363 (416)
T PRK00011 291 NAKALAEALAER-GFRVVS-GGTDNHLVLVDLR-SKGL--T--GKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGT 363 (416)
T ss_pred HHHHHHHHHHhC-CCeeee-cCCCCeEEEEeCc-ccCC--C--HHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecC
Confidence 899999988875 222111 1123355556554 2211 1 25688888899999873 1 24688854
Q ss_pred CC----CCCHHHHHHHHHHHHHHHHH
Q psy14484 406 PY----ILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 406 ~~----~~t~e~i~~~~~~l~~~l~~ 427 (430)
.. .++++|++++++.|++++..
T Consensus 364 ~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 364 PAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred HHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 22 56799999999999987653
No 253
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.81 E-value=2.5e-17 Score=143.59 Aligned_cols=343 Identities=14% Similarity=0.151 Sum_probs=202.9
Q ss_pred ccccccCCCCCH----HHHHHHHHHHhhcc----------ccccCCCCCHHHHHHHHHHHhhcCCC--CCeEEEcCCchH
Q psy14484 42 SWWVNLFGHSNS----YINKALKNQLNKLE----------HVMLSNLTHKPVIKLSEKLSSLTQYK--LGHCFYGSDGAS 105 (430)
Q Consensus 42 ~~~~~~lG~~~p----~v~~a~~~~~~~~~----------~~~~~~~~~~~~~~l~~~l~~~~~~~--~~~v~~~~sgte 105 (430)
.-|..+||-+|| ++.+..++...++. .+..+.+...+.+.+++.|.+.++.. .+.|.+|||+..
T Consensus 29 t~g~imLggGNPa~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs 108 (417)
T COG3977 29 TPGAIMLGGGNPARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQS 108 (417)
T ss_pred CCCceeeCCCCcccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccc
Confidence 334677777776 44444444332221 11223444577788999999988754 458999999999
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCC-CCCCCCCCCCChhHHH
Q psy14484 106 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITT-PDSRNINKGNSANEIA 184 (430)
Q Consensus 106 A~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 184 (430)
|...+..+...++ ..|. .+..++-..|-|-|+-...+. ...|....+.....+. ...|+.
T Consensus 109 ~fFYlfNlF~G~~-sdG~-~k~illPLaPeYiGY~d~~l~-------~d~fVs~kP~iel~~~g~FKY~v---------- 169 (417)
T COG3977 109 AFFYLFNLFAGRR-SDGT-EKKILLPLAPEYIGYADAGLE-------EDLFVSAKPNIELLPAGQFKYHV---------- 169 (417)
T ss_pred hHHHHHHHhcCcc-CCCc-ceeEeeccChhhccccccccC-------ccceeeccCCcccccccceeecc----------
Confidence 9888877765543 2221 234455566788887432221 1111111111111110 001111
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCC
Q psy14484 185 RCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWP 264 (430)
Q Consensus 185 ~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~ 264 (430)
|.+.|+ + .+.+.+|+|+- +.|++| .+.+.+.+.+|-.++++||++||+|.+|. .-+.+-.|.-...-+.+
T Consensus 170 --DF~~l~--i---~e~~g~ic~SR-PtNPTG-NVlTdeE~~kldalA~~~giPliIDnAYg-~PFP~iifsd~~~~w~~ 239 (417)
T COG3977 170 --DFEHLH--I---GESTGAICVSR-PTNPTG-NVLTDEELAKLDALARQHGIPLIIDNAYG-VPFPGIIFSDATPLWNE 239 (417)
T ss_pred --CHHHcc--c---ccccceEEecC-CCCCCC-CcccHHHHHHHHHHhhhcCCcEEEecccC-CCCCceecccccccCCC
Confidence 666654 2 36789999998 889999 66677889999999999999999999985 44444333212222345
Q ss_pred cee---eeec-ccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHH-----HHhhcCHHHHHH
Q psy14484 265 DFL---CLSK-GITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLE-----IFNKDNILQRIS 335 (430)
Q Consensus 265 d~~---~~sK-~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~-----~~~~~~~~~~~~ 335 (430)
+++ ++|| ++- | .|+|.+++++++++.+..-+ -.-+..+...+.+.+..+++ .+.++-++.-++
T Consensus 240 NiilC~SLSK~GLP-G-~R~GIiIane~viqaitnmn------~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~ 311 (417)
T COG3977 240 NIILCMSLSKLGLP-G-SRCGIIIANEKVIQAITNMN------GIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYR 311 (417)
T ss_pred CEEEEeehhhcCCC-C-cceeEEEccHHHHHHHHhcc------ceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHH
Confidence 554 5677 344 4 79999999999998876511 11111111111222222221 122222233334
Q ss_pred HHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec--------------CCE
Q psy14484 336 QDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI--------------GNT 400 (430)
Q Consensus 336 ~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~--------------~~~ 400 (430)
+..+.-.+.|+.. ...+.. --+++|.++.|-+. .+-. .. ..+++++|+++|+++.|+ +.|
T Consensus 312 ~~~q~~~~~l~~~lp~~~~~-iHkpEGAIFlWLWf-~dLP-It--t~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC 386 (417)
T COG3977 312 NRVQTTIAILRRYLPEYRCL-IHKPEGAIFLWLWF-KDLP-IT--TEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQC 386 (417)
T ss_pred HHHHHHHHHHHHhcCcccee-eecCCcceeehhhh-ccCC-CC--HHHHHHHHHhCeEEEecccccCCCCCCCCCCccce
Confidence 4444444444433 333432 23677887776554 3322 11 368999999999999984 358
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 401 VYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 401 lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+|+ ++.-++++|+..+++|.+.+++.
T Consensus 387 ~Rm--n~~~~~~~ie~Gva~lae~ve~~ 412 (417)
T COG3977 387 MRM--NYVPEPEKIEKGVAILAEEVERA 412 (417)
T ss_pred EEE--ecCCCHHHHHHHHHHHHHHHHHH
Confidence 888 78889999999999999988764
No 254
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.81 E-value=4.8e-18 Score=163.17 Aligned_cols=286 Identities=15% Similarity=0.159 Sum_probs=185.2
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
++.++...++++.++++.+ .+.+++++||++|+..++..+.. ++++|++..+.|++........
T Consensus 36 r~~~p~~~~le~~la~l~g--~~~a~~~~sG~~Ai~~~l~~l~~--------~gd~Vl~~~~~y~~~~~~~~~~------ 99 (369)
T cd00614 36 RIGNPTVDALEKKLAALEG--GEAALAFSSGMAAISTVLLALLK--------AGDHVVASDDLYGGTYRLFERL------ 99 (369)
T ss_pred CCCChhHHHHHHHHHHHHC--CCCEEEEcCHHHHHHHHHHHHcC--------CCCEEEECCCCcchHHHHHHHH------
Confidence 4567888999999999984 46788899999999999998764 5678888888887753211110
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
......+..+++.. |+++++++++ +++++|++|+ ++|++|.+.+ +++|.++|
T Consensus 100 ---~~~~g~~~~~v~~~-----------------d~~~l~~~i~---~~~~~v~~e~-~~np~g~~~d----l~~i~~la 151 (369)
T cd00614 100 ---LPKLGIEVTFVDPD-----------------DPEALEAAIK---PETKLVYVES-PTNPTLKVVD----IEAIAELA 151 (369)
T ss_pred ---HhhcCeEEEEeCCC-----------------CHHHHHHhcC---CCCeEEEEEC-CCCCCCeecC----HHHHHHHH
Confidence 00111223334332 6788888885 4688999999 9999997777 99999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCC-ccccEEEEEcH-HHHHhhhccCCcccccccCCC
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGG-YLPLSLVMTTD-KIYNSIYYKNNINIFLHSHSY 308 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG-~~~ig~~~~~~-~~~~~~~~~~~~~~~~~~~t~ 308 (430)
+++|+++|+|+++... .. .......+|++ +++|.++|+ ..+.|++++++ ++.+.+.. .....+.
T Consensus 152 ~~~g~~livD~t~~~~-~~-----~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~------~~~~~g~ 219 (369)
T cd00614 152 HEHGALLVVDNTFATP-YL-----QRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRF------LRLALGT 219 (369)
T ss_pred HHcCCEEEEECCCcch-hc-----CChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHH------HHHhhCC
Confidence 9999999999998622 11 11123346766 678999873 25688899977 77776664 1111233
Q ss_pred CCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhc-----CCCee----------eEeecceEEEEEEeecCC
Q psy14484 309 SGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-----HPKII----------NFRQKGMIWAFDVIIEDP 373 (430)
Q Consensus 309 ~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~-----~~~~~----------~~~~~g~~~~~~~~~~~~ 373 (430)
..++..+..+...|+.+ +...++..++++++.+.|++... +|.+. ...+.|.++.|++. .+
T Consensus 220 ~~~p~~a~~~l~~l~tl--~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~-~~- 295 (369)
T cd00614 220 ILSPFDAWLLLRGLKTL--PLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELK-GG- 295 (369)
T ss_pred CCCHHHHHHHHcCCCCH--HHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeC-CC-
Confidence 44566555555555432 22456667778888888876522 22211 12356889999886 42
Q ss_pred ccchhHHHHHHHHHHHC--C--------cEEee------------------cCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 374 EQIETFSKKFFVAALKN--E--------LLLRP------------------IGNTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 374 ~~~~~~a~~~~~~l~~~--G--------v~~~~------------------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
.+.+.+|.+.|.-- + ++..| ..+.+|+++.+ |+.+.+++.|++++
T Consensus 296 ---~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~svGl----E~~~dl~~dl~~al 368 (369)
T cd00614 296 ---LEAAKKFLNALKLFSLAVSLGGVESLVEHPASMTHSQLPPEERAAAGITPGLVRLSVGI----EDVEDLIADLEQAL 368 (369)
T ss_pred ---HHHHHHHHHcCCcceEcccCCCCceeeeCCcccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHhh
Confidence 11134555554321 1 01101 02578998775 56788888887775
No 255
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.80 E-value=1e-16 Score=155.22 Aligned_cols=340 Identities=9% Similarity=-0.013 Sum_probs=207.3
Q ss_pred CCHHHHHHHHHHHhh-ccccccCCCCCHHHHHHHHHHHhhcCCC-C-CeEEE--cCCchHHHHHHHHHHHHhhhh----c
Q psy14484 51 SNSYINKALKNQLNK-LEHVMLSNLTHKPVIKLSEKLSSLTQYK-L-GHCFY--GSDGASAVEVALKMSFHYWYN----K 121 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~-~~v~~--~~sgteA~~~al~~~~~~~~~----~ 121 (430)
.+|++.+++...+.+ ...........+..++..++++++++.+ . +++.+ |+||||||..|+..++..... .
T Consensus 53 ~~p~~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~ 132 (431)
T TIGR01788 53 MEPEARKLMDETINKNMIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAA 132 (431)
T ss_pred CCHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhc
Confidence 478999998888753 2222222233377788889999999865 3 45655 799999999999888743211 1
Q ss_pred CCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC-CCCCCCCChhHHHHHHHHHHHHHHHhCCC
Q psy14484 122 GFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS-RNINKGNSANEIARCAIFDLEILLKKNHN 200 (430)
Q Consensus 122 g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 200 (430)
|.+....+++.+..-|-+..-+.... ..++..++.+.. ++. |+++|+++++ +
T Consensus 133 g~~~~~~~ii~s~~~H~sv~ka~~~l------------g~~v~~i~~d~~~~~v------------d~~~L~~~i~---~ 185 (431)
T TIGR01788 133 GKPTDKPNLVMGSNVQVCWEKFARYF------------DVELREVPMDPGRYVI------------DPEQVVEAVD---E 185 (431)
T ss_pred CCCCCCcEEEEcCcchHHHHHHHHHc------------CceeEEEecCCCceee------------CHHHHHHHHh---h
Confidence 21112335666666665533222211 123445555432 222 8899999997 4
Q ss_pred CeEEEEEccccccCCCcccCChHHHHHHHHHHHhc------CCEEEEeccccCCCC---ccc-ccccccCCCCCceeeee
Q psy14484 201 KIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNY------NIHLIADEIAVGCGR---TGK-FFACEHAEIWPDFLCLS 270 (430)
Q Consensus 201 ~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~------gi~li~DEv~~g~g~---~g~-~~~~~~~~~~~d~~~~s 270 (430)
++.+|++.. +++++|.+.| +++|.++|+++ ++++++|.+|+|+.. .+. .+.+. ....|-+++|
T Consensus 186 ~t~lV~~t~-g~t~tG~idp----i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~--~~~~DSis~s 258 (431)
T TIGR01788 186 NTIGVVCIL-GTTYTGEYED----VKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR--LPRVKSINVS 258 (431)
T ss_pred CCeEEEEEe-CCCCCcccCC----HHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcC--CCCceEEEEC
Confidence 578888888 9999999999 99999999999 999999999986421 121 12222 2246778888
Q ss_pred --cccCCCccccEEEEEcHH--HHHhhhccC-CcccccccCCCCCCHH--HHHHHHHHHHHHhhc---CHHHHHHHHHHH
Q psy14484 271 --KGITGGYLPLSLVMTTDK--IYNSIYYKN-NINIFLHSHSYSGNPL--ACCAALATLEIFNKD---NILQRISQDMKK 340 (430)
Q Consensus 271 --K~l~gG~~~ig~~~~~~~--~~~~~~~~~-~~~~~~~~~t~~~~~~--~~~aa~~~l~~~~~~---~~~~~~~~~~~~ 340 (430)
|.+.+. ..+|+++.+++ +.+.+.... -........+...... ...+.+..|..+... +..++..++.++
T Consensus 259 ~HK~~~~P-~g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~ 337 (431)
T TIGR01788 259 GHKYGLVY-PGVGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARY 337 (431)
T ss_pred chhccCCC-CCcEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHH
Confidence 554333 57899998764 323322100 0000000012222211 223344555544333 345566778888
Q ss_pred HHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEe----ec---C-CEEEEeCCCCCCHH
Q psy14484 341 ITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLR----PI---G-NTVYLMPPYILNKN 412 (430)
Q Consensus 341 l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~----~~---~-~~lR~~~~~~~t~e 412 (430)
+.++|+++..+..+.. .....+++|... +....... ..++.+.|.++|+.+. |. + ..+|++....++++
T Consensus 338 l~~~L~~~~~~el~~~-~~~~~iV~Fr~~-~~~~~~~~-~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~ 414 (431)
T TIGR01788 338 LAEEIAKLGPFEIISD-GSGIPLVAFKLK-DDADPGYT-LYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRD 414 (431)
T ss_pred HHHHHHhCCCEEEeeC-CCCceEEEEEeC-CCCCCCcC-HHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHH
Confidence 8888876532222211 124556666665 32110111 3578999999998742 21 1 36799887788999
Q ss_pred HHHHHHHHHHHHHHHh
Q psy14484 413 EIQHMTSAIFQTFNEV 428 (430)
Q Consensus 413 ~i~~~~~~l~~~l~~~ 428 (430)
.++.+++.|++++.++
T Consensus 415 ~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 415 LAELLIEDIEAALAYL 430 (431)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999998765
No 256
>PLN02242 methionine gamma-lyase
Probab=99.80 E-value=6.5e-18 Score=163.74 Aligned_cols=291 Identities=12% Similarity=0.080 Sum_probs=182.7
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
+..++...+|++.++++. +.+.+++++||++|+..++..+.. +++.|++..+.|.++.........
T Consensus 72 r~~~Pt~~~LE~~lA~l~--g~~~~l~~~sG~~Ai~~al~al~~--------~GD~Vl~~~~~Y~~~~~~~~~~~~---- 137 (418)
T PLN02242 72 RHFNPTVLNLGRQMAALE--GTEAAYCTASGMSAISSVLLQLCS--------SGGHVVASNTLYGGTHALLAHFLP---- 137 (418)
T ss_pred CCCChhHHHHHHHHHHHh--CCCeEEEEccHHHHHHHHHHHHhC--------CCCEEEEcCCcHHHHHHHHHHhhh----
Confidence 456788999999999998 556788999999999999988765 667888888888654322111000
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
........+++.. |+++++++++. +++++|+++. ++|++|.+.+ +++|.++|
T Consensus 138 ----~~~G~~~~~~d~~-----------------d~e~l~~~i~~--~~tklV~les-p~NPtG~v~d----l~~I~~la 189 (418)
T PLN02242 138 ----RKCNITTTFVDIT-----------------DLEAVKKAVVP--GKTKVLYFES-ISNPTLTVAD----IPELARIA 189 (418)
T ss_pred ----hccCceEEEcCCC-----------------CHHHHHHhcCc--CCCEEEEEec-CCCCCCcccC----HHHHHHHH
Confidence 0011122223222 78889888852 2588999998 9999998776 99999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCCccc-cEEEEEcHHHHHhhhccCCccccccc--CC
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLP-LSLVMTTDKIYNSIYYKNNINIFLHS--HS 307 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~~~-ig~~~~~~~~~~~~~~~~~~~~~~~~--~t 307 (430)
+++|+++|+||+|+.+.. . ...++ .|++ +|||.++++..+ .|++++++++++.+.. .... ..
T Consensus 190 ~~~gi~livDea~~~~~~-~----~~~~g--~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~------~~~~~~~~ 256 (418)
T PLN02242 190 HEKGVTVVVDNTFAPMVL-S----PARLG--ADVVVHSISKFISGGADIIAGAVCGPAELVNSMMD------LHHGALML 256 (418)
T ss_pred HHhCCEEEEECCCCccCC-C----HHHcC--CcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHH------Hhhhhhhc
Confidence 999999999999974421 1 11123 4544 688999874356 4888889888877664 1111 11
Q ss_pred CCCCHHHHHHHHHHHHHHhh-cCHHHHHHHHHHHHHHHHHchh---cCCCee----------eE---eecceEEEEEEee
Q psy14484 308 YSGNPLACCAALATLEIFNK-DNILQRISQDMKKITKALTSLI---THPKII----------NF---RQKGMIWAFDVII 370 (430)
Q Consensus 308 ~~~~~~~~~aa~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~l~---~~~~~~----------~~---~~~g~~~~~~~~~ 370 (430)
.+..+..+.|+..++. ++. +...++..++++++.+.|++.. .+|.+. .. .+-|.++.|++.
T Consensus 257 ~g~~~~~~~A~l~~~~-l~tl~~r~~~~~~~a~~la~~L~~~~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~- 334 (418)
T PLN02242 257 LGPTMNPKVAFELSER-LPHLSLRMKEHCRRAMEYAKRMKELGLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMD- 334 (418)
T ss_pred cCCCCCHHHHHHHHcC-CCcHHHHHHHHHHHHHHHHHHHHhCCCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEEC-
Confidence 2223333444433322 111 2234566778888888887651 122211 11 367888999886
Q ss_pred cCCccchhHHHHHHHHHHH------CCc--------EEee---------------c---CCEEEEeCCCCCCHHHHHHHH
Q psy14484 371 EDPEQIETFSKKFFVAALK------NEL--------LLRP---------------I---GNTVYLMPPYILNKNEIQHMT 418 (430)
Q Consensus 371 ~~~~~~~~~a~~~~~~l~~------~Gv--------~~~~---------------~---~~~lR~~~~~~~t~e~i~~~~ 418 (430)
. .+.+.+|++.+.- .++ +..| . .+.+|+++.+.. +.+.++
T Consensus 335 ~-----~~~~~~f~~~l~~~~~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGlE~---~~~dli 406 (418)
T PLN02242 335 T-----EERANRLMRYLQNSTQFGFMAVSLGYYETLMSCSGSSTSSELDPEEKAAAGISPGLVRMSVGYTG---TLEQRW 406 (418)
T ss_pred C-----HHHHHHHHHHhhcccccceeeecCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecCCC---CHHHHH
Confidence 3 1224667777651 111 1101 0 246888766432 367777
Q ss_pred HHHHHHHHHh
Q psy14484 419 SAIFQTFNEV 428 (430)
Q Consensus 419 ~~l~~~l~~~ 428 (430)
+.|+++|+.|
T Consensus 407 ~dl~~al~~~ 416 (418)
T PLN02242 407 SQFEKALSAM 416 (418)
T ss_pred HHHHHHHHHh
Confidence 7778887765
No 257
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.80 E-value=1e-16 Score=149.35 Aligned_cols=322 Identities=16% Similarity=0.141 Sum_probs=212.3
Q ss_pred CHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCC-CeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEE
Q psy14484 52 NSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKL-GHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFI 130 (430)
Q Consensus 52 ~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl 130 (430)
+|+|++|+....-. ++..-......++.+.|..+++..- +-++++.||+.|+++++..+.. +.++|+
T Consensus 17 ~~~V~~am~~~~~~----h~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~--------pgdkVL 84 (383)
T COG0075 17 PPRVLLAMARPMVG----HRSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVE--------PGDKVL 84 (383)
T ss_pred CHHHHHHhcCCCCC----CCCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccC--------CCCeEE
Confidence 56777776654221 1112223556677788888886442 4577778999999999998876 678888
Q ss_pred EEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccc
Q psy14484 131 CLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPL 210 (430)
Q Consensus 131 ~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~ 210 (430)
+...+..|....-+. ..+..++..+..+-.... ++++++++|++. +++.+|.+.+
T Consensus 85 v~~nG~FG~R~~~ia-----------~~~g~~v~~~~~~wg~~v------------~p~~v~~~L~~~-~~~~~V~~vH- 139 (383)
T COG0075 85 VVVNGKFGERFAEIA-----------ERYGAEVVVLEVEWGEAV------------DPEEVEEALDKD-PDIKAVAVVH- 139 (383)
T ss_pred EEeCChHHHHHHHHH-----------HHhCCceEEEeCCCCCCC------------CHHHHHHHHhcC-CCccEEEEEe-
Confidence 888888886432222 222233344433311111 889999999964 4566666666
Q ss_pred cccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeee--ecccCCCccccEEEEEcHH
Q psy14484 211 VQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCL--SKGITGGYLPLSLVMTTDK 288 (430)
Q Consensus 211 v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~--sK~l~gG~~~ig~~~~~~~ 288 (430)
.-+++|...| +++|.++|++||+++|||.|-+ +|- ..+..+.|++ |+++- -|++++- -.+|.+..+++
T Consensus 140 ~ETSTGvlnp----l~~I~~~~k~~g~l~iVDaVsS-~Gg--~~~~vd~wgi--Dv~itgSQK~l~~P-PGla~v~~S~~ 209 (383)
T COG0075 140 NETSTGVLNP----LKEIAKAAKEHGALLIVDAVSS-LGG--EPLKVDEWGI--DVAITGSQKALGAP-PGLAFVAVSER 209 (383)
T ss_pred ccCcccccCc----HHHHHHHHHHcCCEEEEEeccc-CCC--cccchhhcCc--cEEEecCchhccCC-CccceeEECHH
Confidence 6668898988 9999999999999999999876 653 3445565665 65543 3999874 35889999998
Q ss_pred HHHhhhccCCccccc-------------ccCCCCCCHHHHHHHHHHHHHHhhcC---HHHHHHHHHHHHHHHHHchhcCC
Q psy14484 289 IYNSIYYKNNINIFL-------------HSHSYSGNPLACCAALATLEIFNKDN---ILQRISQDMKKITKALTSLITHP 352 (430)
Q Consensus 289 ~~~~~~~~~~~~~~~-------------~~~t~~~~~~~~~aa~~~l~~~~~~~---~~~~~~~~~~~l~~~l~~l~~~~ 352 (430)
..+.+.....+ ++. ....++++.....+..++|+.+..+. ..++-+++++.++++++++ ++.
T Consensus 210 a~e~~~~~~~~-~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~ 287 (383)
T COG0075 210 ALEAIEERKHP-SFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GLE 287 (383)
T ss_pred HHHHHhcCCCC-ceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCc
Confidence 87776642111 011 13344445556667778898776654 4566677888889999877 333
Q ss_pred Cee-eEeecceEEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec-----CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 353 KII-NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-----GNTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 353 ~~~-~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~-----~~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
.+. .-.....+..+..+ .+.. . .++...++ +.|+.+.++ +..+||.-.-..+.+++..++.+|+.++
T Consensus 288 ~~~~~~~~s~tvta~~~P-~g~~-~----~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L 361 (383)
T COG0075 288 LFADPERRSPTVTAIKVP-EGVD-D----KKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAAL 361 (383)
T ss_pred cccCcccCCCceEEEECC-CCCC-c----HHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHH
Confidence 222 21223345555555 4322 1 22333444 448888765 4789999888889999999999999999
Q ss_pred HHh
Q psy14484 426 NEV 428 (430)
Q Consensus 426 ~~~ 428 (430)
.++
T Consensus 362 ~~~ 364 (383)
T COG0075 362 REL 364 (383)
T ss_pred HHc
Confidence 764
No 258
>PRK02769 histidine decarboxylase; Provisional
Probab=99.80 E-value=2.3e-16 Score=150.77 Aligned_cols=292 Identities=15% Similarity=0.137 Sum_probs=189.6
Q ss_pred CHHHHHHHHHHHhhcCCCCCeE--EEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccch
Q psy14484 76 HKPVIKLSEKLSSLTQYKLGHC--FYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFK 153 (430)
Q Consensus 76 ~~~~~~l~~~l~~~~~~~~~~v--~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~ 153 (430)
....+++.++++++++.+.+++ +||+||||||..|+..++.+. +++ .|+.+..-|.+..-+....
T Consensus 64 ~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~------~~~-~ii~s~~~H~Sv~ka~~~l------ 130 (380)
T PRK02769 64 FDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELF------PDG-TLYYSKDTHYSVSKIARLL------ 130 (380)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhC------CCc-EEEeCCCceehHHHHHHHc------
Confidence 3566788899999998665554 899999999999998887642 333 4555566665543222221
Q ss_pred hhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHH
Q psy14484 154 EIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICN 233 (430)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~ 233 (430)
..+...++...+.+. |+++|++.+++.+.++.+|++.. +++++|.+.| +++|.++|+
T Consensus 131 ------g~~~~~V~~~~~g~i------------d~~~L~~~i~~~~~~t~lvv~t~-gtt~tG~idp----i~~I~~i~~ 187 (380)
T PRK02769 131 ------RIKSRVITSLPNGEI------------DYDDLISKIKENKNQPPIIFANI-GTTMTGAIDN----IKEIQEILK 187 (380)
T ss_pred ------CCCCceeccCCCCcC------------cHHHHHHHHHhCCCCcEEEEEEe-CCCCCcccCC----HHHHHHHHH
Confidence 122234443332332 89999999986544588888898 9999999999 999999999
Q ss_pred hcC---CEEEEeccccCCCCcccc---cccccCCCCCceeeee--cccCCCccccEEEEEcHHHHHhhhccCCccccc-c
Q psy14484 234 NYN---IHLIADEIAVGCGRTGKF---FACEHAEIWPDFLCLS--KGITGGYLPLSLVMTTDKIYNSIYYKNNINIFL-H 304 (430)
Q Consensus 234 ~~g---i~li~DEv~~g~g~~g~~---~~~~~~~~~~d~~~~s--K~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~-~ 304 (430)
++| +++++|.+|+|+ ..... -.++... ..|.+++| |.+++. .++|+++.+++..+.+... ...+. .
T Consensus 188 ~~g~~~~~lHVDaA~gg~-~~p~~~~~~~~d~~~-~vDsis~s~HK~~~~P-~g~G~l~~r~~~~~~~~~~--~~yl~~~ 262 (380)
T PRK02769 188 KIGIDDYYIHADAALSGM-ILPFVNNPPPFSFAD-GIDSIAISGHKFIGSP-MPCGIVLAKKKYVERISVD--VDYIGSR 262 (380)
T ss_pred HhCCCceEEEEEecccce-eecccCccccCCccC-CCCEEEECCcccCCCC-CCcEEEEEehhhhhhcccC--ccccCCC
Confidence 998 699999999864 22100 0112112 57888888 655434 6799999998876655331 00000 0
Q ss_pred cCCCCC--CHHHHHHHHHHHHHHhhcC---HHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhH
Q psy14484 305 SHSYSG--NPLACCAALATLEIFNKDN---ILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETF 379 (430)
Q Consensus 305 ~~t~~~--~~~~~~aa~~~l~~~~~~~---~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 379 (430)
..|+.+ +..+.++..++|+.+...+ ..++..++.+++.++|++. +... -..+..+.+.|..+ +
T Consensus 263 d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~-g~~~--~~~p~~~~v~f~~~-~-------- 330 (380)
T PRK02769 263 DQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQAN-GIPA--WRNPNSITVVFPCP-S-------- 330 (380)
T ss_pred CCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEE--EcCCCceEEEEcCC-C--------
Confidence 112222 2345566667777665543 4466677888888888654 2221 12333344444332 1
Q ss_pred HHHHHHHHHHCCcEEeecCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 380 SKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 380 a~~~~~~l~~~Gv~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
..+. +|..+.+.++.+++.+...++++.+|.+++.|...+.
T Consensus 331 -~~~~-----~~w~l~~~~~~~hi~~~~~~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 331 -ERIW-----KKWHLATSGNQAHIITMPHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred -HHHH-----hCeeEcccCCEEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence 1222 6777777777899988888999999999999988764
No 259
>KOG0256|consensus
Probab=99.79 E-value=2.3e-16 Score=143.31 Aligned_cols=302 Identities=16% Similarity=0.134 Sum_probs=192.0
Q ss_pred CHHHHHHHHHHHhhcC----CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCcc
Q psy14484 76 HKPVIKLSEKLSSLTQ----YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 151 (430)
Q Consensus 76 ~~~~~~l~~~l~~~~~----~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~ 151 (430)
....+++++.+.+..+ .+|+++.+++|+|.|+++.+-+++. +.+-.+++.|.|.|..-...-
T Consensus 124 ~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLad--------pgdafLvPtPyY~gfdrdl~~------ 189 (471)
T KOG0256|consen 124 PSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLAD--------PGDAFLVPTPYYPGFDRDLRW------ 189 (471)
T ss_pred hHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcC--------CCceeeecCCCCCccccccee------
Confidence 3455566666555432 3678999999999999998887776 778999999999987322211
Q ss_pred chhhhhccCCCeeEeCCC--CCCCCCCCCChhHHHHHHHHHHHHHHHhC---CCCeEEEEEccccccCCCcccCChHHHH
Q psy14484 152 FKEIYTSLLNKTYIITTP--DSRNINKGNSANEIARCAIFDLEILLKKN---HNKIAAIIIEPLVQCAGGMIMYDSIYLK 226 (430)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~~~vi~ep~v~~~~G~~~~~~~~l~ 226 (430)
..++..+|+. ..... .-+.++||.++.+. +.+++++++.. ++|+-| ...+++.|.
T Consensus 190 --------rTgveivpv~c~Ss~~f----------~itv~alE~A~~~A~~~~~kVkGvlitN-PsNPLG-~~~~~e~L~ 249 (471)
T KOG0256|consen 190 --------RTGVEIVPVHCSSSNGF----------QITVEALEAALNQARKLGLKVKGVLITN-PSNPLG-TTLSPEELI 249 (471)
T ss_pred --------ccCceEEEEEeecCCCc----------cccHHHHHHHHHHHHHhCCceeEEEEeC-CCCCCC-CccCHHHHH
Confidence 1222233322 11111 01678888887765 46788888877 788888 556778899
Q ss_pred HHHHHHHhcCCEEEEeccccCCCCcccccc-c-c---cCCCCCc----eeeeecccCC-CccccEEEEEc-HHHHHhhhc
Q psy14484 227 LVREICNNYNIHLIADEIAVGCGRTGKFFA-C-E---HAEIWPD----FLCLSKGITG-GYLPLSLVMTT-DKIYNSIYY 295 (430)
Q Consensus 227 ~l~~l~~~~gi~li~DEv~~g~g~~g~~~~-~-~---~~~~~~d----~~~~sK~l~g-G~~~ig~~~~~-~~~~~~~~~ 295 (430)
.+.+++.+++|.+|+||+|+|-.+..+.|- + + .....+| +.++||-+|- | +|+|+++.. +.+.....+
T Consensus 250 ~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpG-fRvGviYS~ne~VvsaA~k 328 (471)
T KOG0256|consen 250 SLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPG-FRVGVIYSNNEDVVSAATK 328 (471)
T ss_pred HHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCc-eEEEEEEecChHHHHHHHH
Confidence 999999999999999999997544333221 1 1 1112344 4479998876 5 799999885 555555443
Q ss_pred cCCcccccccCCCCCCHHHHHHHHHHHHH--Hhh---cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEee
Q psy14484 296 KNNINIFLHSHSYSGNPLACCAALATLEI--FNK---DNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVII 370 (430)
Q Consensus 296 ~~~~~~~~~~~t~~~~~~~~~aa~~~l~~--~~~---~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~ 370 (430)
.++-...+...+.-....|.. +.+ .+..++++...+++.++|+++ +.|. -..+.|+|.++++.
T Consensus 329 --------mssf~~vSs~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~c--l~s~AGlF~wvDlr- 396 (471)
T KOG0256|consen 329 --------MSSFGLVSSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL-GIPC--LKSNAGLFCWVDLR- 396 (471)
T ss_pred --------HhhccCCcHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc-CCce--eecCCeeEEEEEhH-
Confidence 222223344444444444421 111 233455666666777777766 3333 33567888888875
Q ss_pred cCC--ccchhHHHHHHHHHHHC-CcEEeec-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 371 EDP--EQIETFSKKFFVAALKN-ELLLRPI-------GNTVYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 371 ~~~--~~~~~~a~~~~~~l~~~-Gv~~~~~-------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
.-- .+.+. -..+.+++..+ ++.++|+ ++|.|++++ ...++.++-+++||+..+.
T Consensus 397 ~lL~s~tfe~-El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFA-n~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 397 KLLTSLTFEG-ELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFA-NMSEETLEVAMRRLKQFLD 460 (471)
T ss_pred HhcCcCChHH-HHHHHHHHHHhhccccCCCCcceecCCCeEEEEec-cCCHHHHHHHHHHHHHHHH
Confidence 211 11111 14677888777 9999886 478888644 4555666669999988775
No 260
>KOG0633|consensus
Probab=99.79 E-value=1.3e-17 Score=142.56 Aligned_cols=290 Identities=15% Similarity=0.157 Sum_probs=192.9
Q ss_pred HHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhc
Q psy14484 79 VIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTS 158 (430)
Q Consensus 79 ~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 158 (430)
..++...+++--|..++.+++..|+.|.++..+|+.+. ||+++|+..+|+|.-++.. ..+++
T Consensus 71 nk~ls~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~c~-------PGkeKIl~cPPtysMY~v~-A~iNd---------- 132 (375)
T KOG0633|consen 71 NKRLSDALAQDKPLTSDNICVGVGSDELIDLIIRCVCD-------PGKEKILDCPPTYSMYVVD-AAIND---------- 132 (375)
T ss_pred cchhhhhcccCCCCCccceEEecCcHHHHHHHHhheec-------CCccceeecCCcceeEEEE-eecCC----------
Confidence 34566666666677889999999999999999999987 5889999999999755432 22233
Q ss_pred cCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCE
Q psy14484 159 LLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIH 238 (430)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~ 238 (430)
.+++.+|...+++. +.|++.+.+.. ...++++++.+ ++|++|...- .+.+++|.+.=. +++
T Consensus 133 --~eVvkvpl~pdF~l------------nvdai~evl~~-ds~iK~~F~tS-PgNPtg~~ik-~~di~KiLe~p~--ngl 193 (375)
T KOG0633|consen 133 --AEVVKVPLNPDFSL------------NVDAIAEVLEL-DSKIKCIFLTS-PGNPTGSIIK-EDDILKILEMPD--NGL 193 (375)
T ss_pred --ceEEEecCCCCccc------------cHHHHHHHHhc-cccceEEEEcC-CCCCCccccc-HHHHHHHHhCCC--CcE
Confidence 34445554444443 78888888874 35788888888 8888886654 444555555444 689
Q ss_pred EEEeccccCCCCcccccccccCCCCCcee---eeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHH
Q psy14484 239 LIADEIAVGCGRTGKFFACEHAEIWPDFL---CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLAC 315 (430)
Q Consensus 239 li~DEv~~g~g~~g~~~~~~~~~~~~d~~---~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~ 315 (430)
+++||+|..|...++ ...+..-.|+++ ||||++|-.++|+|+.+.+.++.+.+.. ...+++.+.++.
T Consensus 194 VVvDEAYidFsg~~S--~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~~~ia~iln~--------~KaPYNiS~~~s 263 (375)
T KOG0633|consen 194 VVVDEAYIDFSGVES--RMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFPLSIAEILNR--------AKAPYNISVAGS 263 (375)
T ss_pred EEEeeeeEeeccccc--cchHhHhCCceeehhhhhhhcCcceeEeecccccHHHHHHHHh--------ccCCccccchhH
Confidence 999999998854333 222222346665 6999887633899999999998887765 345566666666
Q ss_pred HHHHHHHHHHh---hcCHHHHHHHHHHHHHHHHHchhcCCCeee--EeecceEEEEEEeecCCccchhHHHH-HHHHHHH
Q psy14484 316 CAALATLEIFN---KDNILQRISQDMKKITKALTSLITHPKIIN--FRQKGMIWAFDVIIEDPEQIETFSKK-FFVAALK 389 (430)
Q Consensus 316 ~aa~~~l~~~~---~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~a~~-~~~~l~~ 389 (430)
.+|+++|..-+ -+..++.+-+...++...|.++ +.+.. -....+|+.++.. ++.. ..+.. +.+.+.+
T Consensus 264 ~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v---~~~~~~~gg~daNFiLi~v~-~~~n---~~akkly~q~at~ 336 (375)
T KOG0633|consen 264 VAALAALSDSNGKKMEDVRDAIVRERERLFKELTEV---PFLNDYPGGSDANFILIEVT-GGDN---GMAKKLYKQDATK 336 (375)
T ss_pred HHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcC---ccccCCCCcccccEEEEEEc-CCCc---HHHHHHHHHHHHh
Confidence 66776664211 1233444444444554555544 33321 1335677888777 4321 12334 4455567
Q ss_pred CCcEEeec------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 390 NELLLRPI------GNTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 390 ~Gv~~~~~------~~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
+||+++.. .+++|++.. |+||.+.+++.|++++
T Consensus 337 ~gVvVRfrgse~~c~G~lRitvG---t~EentvL~k~~K~~l 375 (375)
T KOG0633|consen 337 MGVVVRFRGSEEGCKGYLRITVG---TPEENTVLMKCLKQFL 375 (375)
T ss_pred cceEEEEcCCccccceeEEEEcC---CcccchHHHHHHHhhC
Confidence 79999863 478999866 8999999999988753
No 261
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.78 E-value=2.1e-16 Score=155.76 Aligned_cols=342 Identities=14% Similarity=0.047 Sum_probs=197.0
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhh-cc--cc-ccCCCCC---HHHH-HHHHHHHhhcCCCCCeEEEc---CC
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNK-LE--HV-MLSNLTH---KPVI-KLSEKLSSLTQYKLGHCFYG---SD 102 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~-~~--~~-~~~~~~~---~~~~-~l~~~l~~~~~~~~~~v~~~---~s 102 (430)
++.|.+.++ . ..-+|.+++++...+.+ +. .. ....... +..+ ..++.++++++++++++.++ +|
T Consensus 34 ~~~l~l~~s--e---n~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~s 108 (452)
T PTZ00094 34 IEGLELIAS--E---NFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYS 108 (452)
T ss_pred HcCeeEecc--c---ccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCcccceeecCCCc
Confidence 345665554 1 13579999999887753 21 11 1111111 2223 24567888898777777677 79
Q ss_pred chHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhH
Q psy14484 103 GASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANE 182 (430)
Q Consensus 103 gteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (430)
|++||..++..+.. ++++||+. ..-||............ ..... ...+...+++.+..+
T Consensus 109 gt~an~~v~~al~~--------~gd~Ii~~-~~ehg~~l~~~~~l~~~--~~~~~--~~~~~~~~~~~~~~g-------- 167 (452)
T PTZ00094 109 GSPANFAVYTALLQ--------PHDRIMGL-DLPSGGHLTHGFYTAKK--KVSAT--SIYFESLPYQVNEKG-------- 167 (452)
T ss_pred hHHHHHHHHHHhcC--------CCCEEEec-ccccCCccccccccccc--ccccc--eeeeeeeecccCCCC--------
Confidence 99999999988753 45666664 44565433221100000 00000 000111222211111
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccc-cccccCC
Q psy14484 183 IARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FACEHAE 261 (430)
Q Consensus 183 ~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~-~~~~~~~ 261 (430)
..|+++|++.+++. +++.+++ ..++.|...| +++|.++|+++|+++++|++|+ +|..+.. +.....
T Consensus 168 --~id~~~L~~~l~~~--~~~lvi~---~~s~~g~~~d----i~~I~~i~~~~ga~l~vDaaq~-~G~i~~~~~~~~~~- 234 (452)
T PTZ00094 168 --LIDYDKLEELAKAF--RPKLIIA---GASAYPRDID----YKRFREICDSVGAYLMADIAHT-SGLVAAGVLPSPFP- 234 (452)
T ss_pred --CcCHHHHHHHHHHh--CCCEEEE---eCCCCCCccC----HHHHHHHHHHcCCEEEEeccch-hccccCCCCCCCCC-
Confidence 12889999999753 3344444 2245777777 9999999999999999999997 5554321 111111
Q ss_pred CCCceeeee--cccCCCccccEEEEEcHHHHHhhhccCCcccccccCCC--CCCHHHHHHHHHHHHHHhh---cCHHHHH
Q psy14484 262 IWPDFLCLS--KGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSY--SGNPLACCAALATLEIFNK---DNILQRI 334 (430)
Q Consensus 262 ~~~d~~~~s--K~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~--~~~~~~~~aa~~~l~~~~~---~~~~~~~ 334 (430)
..|++++| |++.|. ..|++++++++.+.+.. ..+.... ..+ +.++...++..++++.+.. +++.+++
T Consensus 235 -~~D~l~~S~hK~l~GP--~Gg~l~~~~~~~~~l~~--~~~~~~~-p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i 308 (452)
T PTZ00094 235 -YADVVTTTTHKSLRGP--RSGLIFYRKKVKPDIEN--KINEAVF-PGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQV 308 (452)
T ss_pred -CCcEEEcCCccCCCCC--CceEEEEecccchHHHH--hhccccC-CCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHH
Confidence 47888766 988764 24777777765443322 0000111 111 2345566666677887643 3466788
Q ss_pred HHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEee----c------CCEEEEe
Q psy14484 335 SQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP----I------GNTVYLM 404 (430)
Q Consensus 335 ~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~----~------~~~lR~~ 404 (430)
.++.++|.+.|++. ..+...... ......+.+. ... .. ...+...|.+.||.+.. + ++++|++
T Consensus 309 ~~l~~~l~~~L~~~-g~~v~~~~~-~~~~~~v~~~-~~~--~~--~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis 381 (452)
T PTZ00094 309 LKNAKALAAALEKR-GYDLVTGGT-DNHLVLVDLR-PFG--IT--GSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLG 381 (452)
T ss_pred HHHHHHHHHHHHhC-CcEEecCCC-CCceEeecCC-cCC--CC--HHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEEC
Confidence 88999999888664 222211100 1122333333 211 11 24677778778999952 1 3689999
Q ss_pred CCCCCC----HHHHHHHHHHHHHHHHH
Q psy14484 405 PPYILN----KNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 405 ~~~~~t----~e~i~~~~~~l~~~l~~ 427 (430)
+++.++ ++|++++++.|.+++..
T Consensus 382 ~~~~tt~g~~~~di~~l~~~l~~~~~~ 408 (452)
T PTZ00094 382 TPALTTRGAKEKDFKFVADFLDRAVKL 408 (452)
T ss_pred CHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 987776 99999999999998863
No 262
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.78 E-value=6.4e-17 Score=155.76 Aligned_cols=252 Identities=16% Similarity=0.228 Sum_probs=158.6
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCcc
Q psy14484 72 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 151 (430)
Q Consensus 72 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~ 151 (430)
.++..+...++++.++++.+ .+.+++++||++|+..+++.+.. ++++||+..+.| +.+.....
T Consensus 49 ~r~~~p~~~~le~~la~l~g--~~~~~~~~sG~~Ai~~al~al~~--------~Gd~Vl~~~~~~-~~t~~~~~------ 111 (380)
T TIGR01325 49 SRYANPTVAAFEERIAALEG--AERAVATATGMSAIQAALMTLLQ--------AGDHVVASRSLF-GSTVGFIS------ 111 (380)
T ss_pred ecCCCchHHHHHHHHHHHhC--CCcEEEECCHHHHHHHHHHHHhC--------CCCEEEEecCCc-chHHHHHH------
Confidence 35667888999999999984 46788999999999999987754 556777766555 43221111
Q ss_pred chhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHH
Q psy14484 152 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 231 (430)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l 231 (430)
........++.+++.+ |+++++++++ +++++|++|. ++|+.|...+ +++|.++
T Consensus 112 --~~~~~~g~~v~~v~~~-----------------d~~~l~~~i~---~~tklV~le~-p~np~g~~~d----l~~I~~l 164 (380)
T TIGR01325 112 --EILPRFGIEVSFVDPT-----------------DLNAWEAAVK---PNTKLVFVET-PSNPLGELVD----IAALAEL 164 (380)
T ss_pred --HHHHHhCCEEEEECCC-----------------CHHHHHHhcC---CCceEEEEEC-CCCCCCeeeC----HHHHHHH
Confidence 0111122333444433 6788888775 4688999998 9999997776 9999999
Q ss_pred HHhcCCEEEEeccccCCCCcccccccccCCCCCceee--eecccCCCcccc-EEEEEcHHHHHhhhccCCcccccccCCC
Q psy14484 232 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGGYLPL-SLVMTTDKIYNSIYYKNNINIFLHSHSY 308 (430)
Q Consensus 232 ~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~--~sK~l~gG~~~i-g~~~~~~~~~~~~~~~~~~~~~~~~~t~ 308 (430)
|+++|+++|+||+|+... .. ......+|+++ ++|.++|+..++ |++++++++.+.+.. .......
T Consensus 165 a~~~gi~livD~a~~~~~-~~-----~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~------~~~~~g~ 232 (380)
T TIGR01325 165 AHAIGALLVVDNVFATPV-LQ-----QPLKLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAV------YLRHTGP 232 (380)
T ss_pred HHHcCCEEEEECCCcccc-cC-----CchhhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHH------HHHhhCC
Confidence 999999999999986321 11 11233467775 779998843455 677778887776654 1111111
Q ss_pred CCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhc-----CCCee----------eEeecceEEEEEEeecCC
Q psy14484 309 SGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-----HPKII----------NFRQKGMIWAFDVIIEDP 373 (430)
Q Consensus 309 ~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~-----~~~~~----------~~~~~g~~~~~~~~~~~~ 373 (430)
..++..+..+...++.+.. ..++..+.+.++.+.|++.+. +|... ...+-|.++.|++. +
T Consensus 233 ~~~p~~a~~~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~-~-- 307 (380)
T TIGR01325 233 AMSPFNAWVLLKGLETLSL--RMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVA-D-- 307 (380)
T ss_pred CCCHHHHHHHHhccCcHHH--HHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEC-C--
Confidence 2244444444444443322 345556666666676665321 23211 12356889999886 3
Q ss_pred ccchhHHHHHHHHH
Q psy14484 374 EQIETFSKKFFVAA 387 (430)
Q Consensus 374 ~~~~~~a~~~~~~l 387 (430)
.+.+.+|.+.|
T Consensus 308 ---~~~~~~f~~~l 318 (380)
T TIGR01325 308 ---RAAAWKVLDAV 318 (380)
T ss_pred ---HHHHHHHHHcC
Confidence 11135566655
No 263
>KOG1368|consensus
Probab=99.78 E-value=6.3e-17 Score=140.97 Aligned_cols=333 Identities=13% Similarity=0.129 Sum_probs=206.1
Q ss_pred EEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHH
Q psy14484 35 RYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMS 114 (430)
Q Consensus 35 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~ 114 (430)
...|+-|..-. -.-.++++++.++... .. -++-++...+|++..++++ +.|.-+|.+|||..|.+|++.-
T Consensus 22 ~~vDLRSDTvT----~PTdeMr~am~eA~vg-Dd---VyGeD~tt~rLE~~vA~l~--GKEAgLFv~SGTmgNllaIm~H 91 (384)
T KOG1368|consen 22 RSVDLRSDTVT----VPTDEMRRAMAEASVG-DD---VYGEDPTTNRLEQRVAELF--GKEAGLFVPSGTMGNLLAIMVH 91 (384)
T ss_pred ecccccccccc----CChHHHHHHHhhcccC-cc---cccCCccHHHHHHHHHHHh--CccceeeecccccccHHHHHHH
Confidence 45677665322 2446788888876422 11 1344566678989999998 6788999999999999999988
Q ss_pred HHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeC--CCCCCCCCCCCChhHHHHHHHHHHH
Q psy14484 115 FHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIIT--TPDSRNINKGNSANEIARCAIFDLE 192 (430)
Q Consensus 115 ~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~le 192 (430)
+..+ +...++-....-|-|..+..+ ...++...+ ..++.. -+++++|
T Consensus 92 c~~r------g~eii~gd~~HI~~~E~gg~s-------------~l~gv~~~tv~~e~dgt------------m~ledIe 140 (384)
T KOG1368|consen 92 CHQR------GSEIIVGDRAHIHRYEQGGIS-------------QLAGVHVRTVKNENDGT------------MDLEDIE 140 (384)
T ss_pred hcCC------CceEEeccchheeehhccChh-------------hhccceeEeeeeCCCCe------------eeHHHHH
Confidence 7631 333333222222222211111 111222222 111111 2899999
Q ss_pred HHHHhC-----CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCC-cccccccccCCCCCc-
Q psy14484 193 ILLKKN-----HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGR-TGKFFACEHAEIWPD- 265 (430)
Q Consensus 193 ~~l~~~-----~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~-~g~~~~~~~~~~~~d- 265 (430)
..++.. .+.+.+|.+|. .+++.|..+.|.+|+.++.++|++||+.|++|-+.- |-- ....-....+.-..|
T Consensus 141 ~~ir~~~GD~H~p~T~LIclEN-T~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi-~NAavasgV~vk~i~~~fDS 218 (384)
T KOG1368|consen 141 AAIRVPKGDCHMPPTKLICLEN-THNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARI-FNAAVASGVPVKKICSAFDS 218 (384)
T ss_pred HhhcCCCCCccCCCceEEEeec-cccccCceEeeHHHHHHHHHHHhccCCeeecchhhh-hhHHHHcCCCHHHHHHhhhh
Confidence 999843 23578899998 777666689999999999999999999999996532 100 000001111111123
Q ss_pred -eeeeecccCCCccccE-EEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Q psy14484 266 -FLCLSKGITGGYLPLS-LVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITK 343 (430)
Q Consensus 266 -~~~~sK~l~gG~~~ig-~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~ 343 (430)
=++|||+|+ .|+| .+++++++++.... -|. ..++.+-..-.-+++++.+|+ +.-.....-.+++..+.+
T Consensus 219 VsiCLSKglg---APVGSViVG~k~FI~kA~~---~RK-alGGGmRQsGvLaaaaLval~--~~~~~L~~dHk~A~~lAe 289 (384)
T KOG1368|consen 219 VSICLSKGLG---APVGSVIVGSKDFIDKARH---FRK-ALGGGMRQSGVLAAAALVALD--ENVPLLRADHKRAKELAE 289 (384)
T ss_pred hhhhhhccCC---CCcccEEEccHHHHHHHHH---HHH-HhcCchhHHHHHHHHHHHHhh--cchHHHHHHHHHHHHHHH
Confidence 358999998 5777 56677887754322 011 133333323344445555554 222355566677777777
Q ss_pred HHHchhcCCCeeeEe-ecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-CEEEEeCCCCCCHHHHHHHHHHH
Q psy14484 344 ALTSLITHPKIINFR-QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAI 421 (430)
Q Consensus 344 ~l~~l~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-~~lR~~~~~~~t~e~i~~~~~~l 421 (430)
.++..++.+. .++ .+..|..+++. ...-. ++.++..+.+.|+++..+. ..+|+.++...|+++++..+..|
T Consensus 290 ~~~~~~~i~v--~v~a~etNiv~~~l~-q~~~~----~~~l~~~~~k~gi~lm~~~s~r~Rivlh~Qvt~~~ve~~~~~~ 362 (384)
T KOG1368|consen 290 YINTPEEIRV--EVPAVETNIVNMVLC-QARLT----AEELCKFLEKNGILLMGGASRRIRIVLHHQVTDEDVEYVKSVL 362 (384)
T ss_pred Hhccccceee--ecchhhcceeeeecc-cccCC----HHHHHHHHHHCCeEEeeccccceEEEEEEecCHHHHHHHHHHH
Confidence 7775533332 333 56677777665 32221 5789999999999988763 67999999999999999999999
Q ss_pred HHHHH
Q psy14484 422 FQTFN 426 (430)
Q Consensus 422 ~~~l~ 426 (430)
++.+.
T Consensus 363 ~k~~~ 367 (384)
T KOG1368|consen 363 SKKFL 367 (384)
T ss_pred HHHHH
Confidence 65543
No 264
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.77 E-value=2.9e-16 Score=155.21 Aligned_cols=292 Identities=16% Similarity=0.145 Sum_probs=174.1
Q ss_pred HHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhh
Q psy14484 78 PVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYT 157 (430)
Q Consensus 78 ~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~ 157 (430)
...++.++++++++.+.+++.+++||+++++.++.+.... ++++|++.++.|+.+. ....... .
T Consensus 113 ~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~~-------~g~~Vlv~~~~~~~~~-~~~~~~~--------~ 176 (447)
T PRK00451 113 AIFEYQTMICELTGMDVANASMYDGATALAEAALMAVRIT-------KRKKVLVSGAVHPEYR-EVLKTYL--------K 176 (447)
T ss_pred HHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHhc-------CCCEEEEeCccCHHHH-HHHHHHH--------H
Confidence 3345557789999878789999999999988877655421 5567887766554332 2111100 0
Q ss_pred ccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCC
Q psy14484 158 SLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNI 237 (430)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi 237 (430)
....+.+.++.+.. +. |++++++.+. +++++++++. + +++|.+.+ +++|.++|+++|+
T Consensus 177 ~~G~~~~~v~~~~~-~~------------d~~~l~~~i~---~~t~~v~l~~-p-n~tG~v~~----l~~I~~~a~~~~~ 234 (447)
T PRK00451 177 GQGIEVVEVPYEDG-VT------------DLEALEAAVD---DDTAAVVVQY-P-NFFGVIED----LEEIAEIAHAGGA 234 (447)
T ss_pred hCCcEEEEecCCCC-CC------------CHHHHHHhcC---CCeEEEEEEC-C-CCCCeeCC----HHHHHHHHHHCCC
Confidence 01123344544332 22 8899998885 5688888887 7 67888877 9999999999999
Q ss_pred EEEE--eccccCCCCcccccccccCCCCCceeee-----ecccC-CCccccEEEEEcHHHHHhhhcc---------CC--
Q psy14484 238 HLIA--DEIAVGCGRTGKFFACEHAEIWPDFLCL-----SKGIT-GGYLPLSLVMTTDKIYNSIYYK---------NN-- 298 (430)
Q Consensus 238 ~li~--DEv~~g~g~~g~~~~~~~~~~~~d~~~~-----sK~l~-gG~~~ig~~~~~~~~~~~~~~~---------~~-- 298 (430)
++++ |.+..|. .. .. .....|++++ ||.+. +| +++|++++++++.+.+... ++
T Consensus 235 ~~iv~~d~~~~g~--~~---~~--~~~~~D~~~~s~~k~~~~~~~~G-pg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~ 306 (447)
T PRK00451 235 LFIVGVDPVSLGL--LK---PP--GEYGADIVVGEGQPLGIPLSFGG-PYLGFFATRKKLVRQMPGRLVGETVDADGKRG 306 (447)
T ss_pred EEEEEcChHHhcc--CC---Cc--ccCCCCEEEECCCcCCCCCCCCC-CCchHHHhhHHHHhhCCCCEeeeecccCCCee
Confidence 9998 6543222 11 01 1234677754 55533 34 5899999999887764210 00
Q ss_pred ----------cccccccC-CCCCCH-HHHHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceE
Q psy14484 299 ----------INIFLHSH-SYSGNP-LACCAALATLEIFNK---DNILQRISQDMKKITKALTSLITHPKIINFRQKGMI 363 (430)
Q Consensus 299 ----------~~~~~~~~-t~~~~~-~~~~aa~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~ 363 (430)
...+.+.. +.+.+. +...++..+++.+.+ ++..+++.++.+++.++|+++ +++... .+.+
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~---~g~~~~--~~~~ 381 (447)
T PRK00451 307 FVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEI---GGVELF--DGPF 381 (447)
T ss_pred eEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhc---CCEEec--CCCe
Confidence 00111111 111121 111233334443322 345567777888888888765 322222 2222
Q ss_pred EEEEEeecCCccchhHHHHHHHHHHHCCcEEe----ec----CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 364 WAFDVIIEDPEQIETFSKKFFVAALKNELLLR----PI----GNTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 364 ~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~----~~----~~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
+.+... +-.. . +.+++++|.++|+... +. .+++|++++..+|+++++++++.|++++
T Consensus 382 ~~~~~v-~~~~-~---~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 382 FNEFVV-RLPK-P---AEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred EEEEEE-ecCC-C---HHHHHHHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 221111 1000 1 3679999999987632 21 3589999999999999999999998764
No 265
>PLN03032 serine decarboxylase; Provisional
Probab=99.77 E-value=5.6e-16 Score=146.97 Aligned_cols=311 Identities=12% Similarity=0.071 Sum_probs=196.2
Q ss_pred HHHHHHHHHHHhh-ccccccCC----CCCHHHHHHHHHHHhhcCCCCCeE--EEcCCchHHHHHHHHHHHHhhhhcCCCC
Q psy14484 53 SYINKALKNQLNK-LEHVMLSN----LTHKPVIKLSEKLSSLTQYKLGHC--FYGSDGASAVEVALKMSFHYWYNKGFLN 125 (430)
Q Consensus 53 p~v~~a~~~~~~~-~~~~~~~~----~~~~~~~~l~~~l~~~~~~~~~~v--~~~~sgteA~~~al~~~~~~~~~~g~~~ 125 (430)
+.+.+++.+.+.+ ++...... ......+++.++++++++.+++++ +||+||||||..|+.+++... +
T Consensus 37 ~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~------~ 110 (374)
T PLN03032 37 YGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVF------P 110 (374)
T ss_pred hHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhC------C
Confidence 4556666665542 22211111 123667888899999998777776 999999999999999887642 2
Q ss_pred CcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEE
Q psy14484 126 KKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAI 205 (430)
Q Consensus 126 ~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~v 205 (430)
+ .+++.+...|-+..-++...+ .+...++.+...+. |+++|++++++....+.+|
T Consensus 111 ~-~~vi~s~~~H~Sv~kaa~~lg------------~~~~~V~~d~~g~i------------d~~~L~~~i~~~~~~~~lv 165 (374)
T PLN03032 111 D-GILYASRESHYSVFKAARMYR------------MEAVKVPTLPSGEI------------DYDDLERALAKNRDKPAIL 165 (374)
T ss_pred C-cEEEeCCCceeHHHHHHHHcC------------CCCeEeeeCCCCcC------------cHHHHHHHHHHcCCCCEEE
Confidence 2 366777777766443332222 22345555544444 9999999998643457788
Q ss_pred EEccccccCCCcccCChHHHHHHHHHHHhcC-----CEEEEeccccCCCCcc-----cccccccCCCCCceeeee--ccc
Q psy14484 206 IIEPLVQCAGGMIMYDSIYLKLVREICNNYN-----IHLIADEIAVGCGRTG-----KFFACEHAEIWPDFLCLS--KGI 273 (430)
Q Consensus 206 i~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g-----i~li~DEv~~g~g~~g-----~~~~~~~~~~~~d~~~~s--K~l 273 (430)
++.. .++++|.+.| +++|.++|+++| +++++|.+|.|+ ... ..+.+ ....|.++++ |.+
T Consensus 166 v~ta-gtt~tG~idp----i~eI~~i~~~~g~~~~~~~lHvDaA~gg~-~~p~~~~~~~~~~---~~~vDSis~s~HK~~ 236 (374)
T PLN03032 166 NVNI-GTTVKGAVDD----LDRILRILKELGYTEDRFYIHCDGALFGL-MMPFVSRAPEVTF---RKPIGSVSVSGHKFL 236 (374)
T ss_pred EEEe-cCcCCccCCC----HHHHHHHHHHhCCCCCCeeEEEEccchhh-hhhccCCCcccCC---CcCCcEEEECccccc
Confidence 8888 9999999999 999999999997 589999999754 211 01111 1236888887 544
Q ss_pred CCCccccEEEEEcHHHHHhhhccCCccccc-ccCCCCCC--HHHHHHHHHHHHHHhhcCH---HHHHHHHHHHHHHHHHc
Q psy14484 274 TGGYLPLSLVMTTDKIYNSIYYKNNINIFL-HSHSYSGN--PLACCAALATLEIFNKDNI---LQRISQDMKKITKALTS 347 (430)
Q Consensus 274 ~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~-~~~t~~~~--~~~~~aa~~~l~~~~~~~~---~~~~~~~~~~l~~~l~~ 347 (430)
+.. .++|+++.+++..+.+... ...+. ...|..++ ....++.+.+|..+..+++ .++..++++++.++|++
T Consensus 237 g~P-~g~G~ll~r~~~~~~~~~~--~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~ 313 (374)
T PLN03032 237 GCP-MPCGVALTRKKHVKALSQN--VEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTE 313 (374)
T ss_pred CCC-cCeEEEEEEchhhHhhccC--CcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 323 6789999998776554321 00000 01233333 2345566677776655544 45567788888888876
Q ss_pred hhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecCCEEEEeCCCCCCHHHHHHHHHHHHH
Q psy14484 348 LITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQ 423 (430)
Q Consensus 348 l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~ 423 (430)
. .... ...+..+.+.|..+ . . .. ..+|..+....+.+++.+...++++.+|++++.|++
T Consensus 314 ~-~~~~--~~~p~~~~V~f~~~-~-----~---~~-----~~~~w~l~~~~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 314 A-GLTC--RLNELSSTVVFERP-M-----D---EA-----FIKKWQLACEGDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred C-CCcE--EECCCceEEEEcCC-C-----c---Hh-----HhheeeecccCCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 4 2221 22233333333222 1 1 11 225666666667888888877899999999998865
No 266
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.77 E-value=1.7e-16 Score=152.10 Aligned_cols=297 Identities=12% Similarity=0.021 Sum_probs=178.4
Q ss_pred CCCCHHHHHHHHHHHhhccccccCCC------CCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcC
Q psy14484 49 GHSNSYINKALKNQLNKLEHVMLSNL------THKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKG 122 (430)
Q Consensus 49 G~~~p~v~~a~~~~~~~~~~~~~~~~------~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g 122 (430)
|..++.+++++.+.+........... ..+..+++++.++++++.++++++|++|+++|++.+++.+.....
T Consensus 8 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~--- 84 (353)
T TIGR03235 8 TPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGE--- 84 (353)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcc---
Confidence 44688999999988754211111000 114467888999999988888999999999999999887754210
Q ss_pred CCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCe
Q psy14484 123 FLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKI 202 (430)
Q Consensus 123 ~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 202 (430)
.++++.|++ ....|.......... .....++..++.+.+... |++++++.++ +++
T Consensus 85 ~~g~~~vi~-~~~~~~s~~~~~~~~---------~~~G~~v~~v~~~~~~~~------------d~~~l~~~l~---~~~ 139 (353)
T TIGR03235 85 QKGKKHIIT-SAIEHPAVLEPIRAL---------ERNGFTVTYLPVDESGRI------------DVDELADAIR---PDT 139 (353)
T ss_pred cCCCCeeeE-cccccHHHHHHHHHH---------HhcCCEEEEEccCCCCcC------------CHHHHHHhCC---CCC
Confidence 012344554 444444422221110 111223344554432222 7889998885 467
Q ss_pred EEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeee--cccCCCcccc
Q psy14484 203 AAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITGGYLPL 280 (430)
Q Consensus 203 ~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s--K~l~gG~~~i 280 (430)
++++++. +++++|.+.+ +++|.++|+++|+++|+|++|+ +|... ++.....+|++++| |.++. ..+
T Consensus 140 ~lv~~~~-~~n~tG~~~~----~~~I~~l~~~~~~~~ivD~a~~-~g~~~----~~~~~~~~D~~~~s~~K~~gp--~g~ 207 (353)
T TIGR03235 140 LLVSIMH-VNNETGSIQP----IREIAEVLEAHEAFFHVDAAQV-VGKIT----VDLSADRIDLISCSGHKIYGP--KGI 207 (353)
T ss_pred EEEEEEc-ccCCceeccC----HHHHHHHHHHcCCEEEEEchhh-cCCcc----ccccccCCCEEEeehhhcCCC--Cce
Confidence 8888888 9999998888 9999999999999999999987 54321 22223357888877 96432 348
Q ss_pred EEEEEcHHHHHh--hhc---c-CCcccccccCCCCCCHHHHHHHHHHHHHHhh--cCHHHHHHHHHHHHHHHHHchhcCC
Q psy14484 281 SLVMTTDKIYNS--IYY---K-NNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDMKKITKALTSLITHP 352 (430)
Q Consensus 281 g~~~~~~~~~~~--~~~---~-~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~l~~~~ 352 (430)
|+++++++.... +.+ + +..+.+ . ..+.+.....+..++++++.. ++..++++++.+++++.|++. ...
T Consensus 208 g~l~~~~~~~~~~~~~~~~~~~~~~~~~-~--~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~-g~~ 283 (353)
T TIGR03235 208 GALVIRKRGKPKAPLKPIMFGGGQERGL-R--PGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQTL-GVK 283 (353)
T ss_pred EEEEEccCcccccccCceeeCCCCcCcc-c--cCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccC-CeE
Confidence 999998874322 111 0 000001 1 123345555556667765542 456677888888888888653 221
Q ss_pred CeeeE-eecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec
Q psy14484 353 KIINF-RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI 397 (430)
Q Consensus 353 ~~~~~-~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~ 397 (430)
.+... .....+..+.+. . . . ...+.+.|.+ +|.+.++
T Consensus 284 ~~~~~~~~~~~i~~~~~~-~-~---~--~~~v~~~L~~-~i~v~~g 321 (353)
T TIGR03235 284 LNGDPAETIPHILNFSID-G-V---N--SEALIVNLRA-DAAVSTG 321 (353)
T ss_pred EeCCcccccCCEEEEEeC-C-c---C--HHHHHHHHhC-CeEEEch
Confidence 11111 112334445443 2 1 1 3567777854 8888765
No 267
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.77 E-value=5.2e-16 Score=161.63 Aligned_cols=309 Identities=14% Similarity=0.139 Sum_probs=201.8
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEEcCCch----HHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 77 KPVIKLSEKLSSLTQYKLGHCFYGSDGA----SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~v~~~~sgt----eA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
+...+++++|++++ +.++|.|+++++ +|+..+++.... .+|+.. .++++.+.+.||+........+
T Consensus 568 ~~~~~~r~~la~i~--g~~~v~f~pnaga~ge~a~~~vi~~~~~---~~Gd~~-r~~vli~~~aH~sn~a~a~~~G---- 637 (993)
T PLN02414 568 EMFEDLGDLLCEIT--GFDSFSLQPNAGAAGEYAGLMVIRAYHL---SRGDHH-RNVCIIPVSAHGTNPASAAMCG---- 637 (993)
T ss_pred HHHHHHHHHHHHHh--CCCeEEEcCCCcHHHHHHHHHHHHHHHh---ccCCCC-CCEEEeCCCcCccCHHHHHHCC----
Confidence 56678999999999 459999999888 777777776643 334322 3466667899998665444322
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
.+++.++.+.+... |+++|+++++++.+++++|++.. +++.+|...+ +++|.++|
T Consensus 638 --------~~vv~v~~d~~G~v------------Dle~L~~~i~~~~~~ta~V~vt~-pSn~gg~e~~----I~eI~~ia 692 (993)
T PLN02414 638 --------MKIVVVGTDAKGNI------------NIEELRKAAEAHKDNLAALMVTY-PSTHGVYEEG----IDEICDII 692 (993)
T ss_pred --------CEEEEeccCCCCCc------------CHHHHHHHHhccCCCeEEEEEEC-CCccccccch----HHHHHHHH
Confidence 34455655433333 89999999986656899999988 8888998877 99999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCceeeee--cccC----CCccccEEEEEcHHHHHhhhccC--Cc----c
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGIT----GGYLPLSLVMTTDKIYNSIYYKN--NI----N 300 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s--K~l~----gG~~~ig~~~~~~~~~~~~~~~~--~~----~ 300 (430)
+++|+++++|.++. .+-.+ .........|+++++ |.++ +|+-.+|.+.+++++...+-... .. +
T Consensus 693 h~~Galv~vDgAq~-~a~~~---l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~ 768 (993)
T PLN02414 693 HDNGGQVYMDGANM-NAQVG---LTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPR 768 (993)
T ss_pred HHcCCEEEEEecCH-HhccC---cCCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCccc
Confidence 99999999999986 21111 111123457888874 7654 34356999999998765543210 00 0
Q ss_pred cccc--cCCCC----CCHHHHHHHHHHHHHHhhcCH---HHHHHHHHHHHHHHHHchhcCCCeeeEeecc-eEEEE--EE
Q psy14484 301 IFLH--SHSYS----GNPLACCAALATLEIFNKDNI---LQRISQDMKKITKALTSLITHPKIINFRQKG-MIWAF--DV 368 (430)
Q Consensus 301 ~~~~--~~t~~----~~~~~~~aa~~~l~~~~~~~~---~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g-~~~~~--~~ 368 (430)
.... .+|.. ++.+.+.+++..++.+..+.+ .++...++.|++++|++. .+.. ...+.| .+.-+ .+
T Consensus 769 r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~--~~~~-~~~~~~~~~hEfv~~~ 845 (993)
T PLN02414 769 PEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGH--YPVL-FRGKNGTCAHEFIIDL 845 (993)
T ss_pred ccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhh--CCcc-ccCCCCCeeeeEEEec
Confidence 0010 12322 334555566666777666666 566777889999999763 2211 111111 12111 22
Q ss_pred eecCCccchhHHHHHHHHHHHCCcEEe----ecCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 369 IIEDPEQIETFSKKFFVAALKNELLLR----PIGNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 369 ~~~~~~~~~~~a~~~~~~l~~~Gv~~~----~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
. .-+......+..+.++|.+.|+... |..+.+|++|....+++|||+++++|.++..+.
T Consensus 846 ~-~l~~~~g~~~~di~krL~d~Gihapt~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e~ 908 (993)
T PLN02414 846 R-PFKNTAGIEPEDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEI 908 (993)
T ss_pred c-ccccccCCCHHHHHHHHHHcCcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHH
Confidence 1 1110000113679999999888754 346789999999999999999999998887764
No 268
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.77 E-value=5.3e-16 Score=153.60 Aligned_cols=336 Identities=14% Similarity=0.079 Sum_probs=192.2
Q ss_pred CCCHHHHHHHHHHHhhccccc-----cCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCC
Q psy14484 50 HSNSYINKALKNQLNKLEHVM-----LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFL 124 (430)
Q Consensus 50 ~~~p~v~~a~~~~~~~~~~~~-----~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~ 124 (430)
|-+|.|.+++.+.....++.. ...+..+...+++++++++++.+ ...++.++|+.+...++.+++.....+|..
T Consensus 81 ~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~-~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~ 159 (481)
T PRK04366 81 KYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMD-AVTLQPAAGAHGELTGLLMIRAYHEARGDT 159 (481)
T ss_pred CCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCC-ceEEEeCcHHHHHHHHHHHHHHHhhccCcC
Confidence 457888888877522212111 11122366778889999998644 233444566666655444444322233322
Q ss_pred CCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEE
Q psy14484 125 NKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAA 204 (430)
Q Consensus 125 ~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~ 204 (430)
++++|++.++.|+.+... .... ..+.+.++.+.++.. |+++|++.+. +++++
T Consensus 160 ~~~~Vlv~~~~hp~~~~~-~~~~------------G~~vv~v~~~~~~~~------------D~e~L~~~i~---~~t~~ 211 (481)
T PRK04366 160 KRTEVIVPDSAHGTNPAS-AAMA------------GFKVVEIPSNEDGLV------------DLEALKAAVG---EDTAA 211 (481)
T ss_pred CCCEEEEcCCccHhHHHH-HHHc------------CCEEEEeecCCCCCc------------CHHHHHhhcc---cCCeE
Confidence 456788888766554332 2211 223344544322222 8899998885 45666
Q ss_pred EEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeee--cccC----CCcc
Q psy14484 205 IIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGIT----GGYL 278 (430)
Q Consensus 205 vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s--K~l~----gG~~ 278 (430)
|++.. ++ ++|.+. ..+++|.++|+++|+++|+|+++. .+..|.. ... ....|+++++ |.++ +|+.
T Consensus 212 V~v~~-Pn-~tG~~~---~dl~eI~~~a~~~gal~iVD~a~~-~~~~g~~-~~~--~~GaD~~~~~~hK~l~~P~g~Ggp 282 (481)
T PRK04366 212 LMLTN-PN-TLGLFE---RNILEIAEIVHEAGGLLYYDGANL-NAILGKA-RPG--DMGFDVVHLNLHKTFSTPHGGGGP 282 (481)
T ss_pred EEEeC-CC-Cccccc---hHHHHHHHHHHHcCCEEEEEecCh-hhhcccC-Ccc--ccCCCEEEEechhhcCCCCCCCCC
Confidence 66654 55 566541 239999999999999999999985 2222211 112 2346888764 8765 2324
Q ss_pred ccEEEEEcHHHHHhhhcc-----CC--------cccccccCCCCCCHHHHHHHHHHHHHHhhcCHH---HHHHHHHHHHH
Q psy14484 279 PLSLVMTTDKIYNSIYYK-----NN--------INIFLHSHSYSGNPLACCAALATLEIFNKDNIL---QRISQDMKKIT 342 (430)
Q Consensus 279 ~ig~~~~~~~~~~~~~~~-----~~--------~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~---~~~~~~~~~l~ 342 (430)
.+|++++++++.+.+... +. .......-.++++.+.+.++...+..+..+++. ++..++.++++
T Consensus 283 ~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~ 362 (481)
T PRK04366 283 GSGPVGVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLK 362 (481)
T ss_pred CeeeeeehhhhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 577888888777655310 00 000001112233445555666666666555443 45566788999
Q ss_pred HHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEee------cCCEEEEeCCCCCCHHHHHH
Q psy14484 343 KALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP------IGNTVYLMPPYILNKNEIQH 416 (430)
Q Consensus 343 ~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~------~~~~lR~~~~~~~t~e~i~~ 416 (430)
++|+++ ...... ...-..+.+... .-.. ....+.++.++|.++|+.... ..+.+|++++..+|++|||.
T Consensus 363 ~~L~~~--~~~~~~-~~~~~~~~~~~~-~~~~-~g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~ 437 (481)
T PRK04366 363 ARLKDI--YDLPYD-RPCMHEFVLSGK-KLKE-TGVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPTETESKETLDA 437 (481)
T ss_pred HHhHhh--CcccCC-CCeeEEEEEECc-cccc-cCCCHHHHHHHHHHCCccCCccccccccCCeEEEcccCCCCHHHHHH
Confidence 999875 111111 000011112111 0000 000146799999999988652 14689999999999999999
Q ss_pred HHHHHHHHHHHh
Q psy14484 417 MTSAIFQTFNEV 428 (430)
Q Consensus 417 ~~~~l~~~l~~~ 428 (430)
+++.|+++..++
T Consensus 438 l~~~l~~i~~~~ 449 (481)
T PRK04366 438 FIAAMKQIAEEA 449 (481)
T ss_pred HHHHHHHHHHHH
Confidence 999999988765
No 269
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.76 E-value=1.3e-16 Score=153.92 Aligned_cols=289 Identities=13% Similarity=0.111 Sum_probs=178.4
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
++.++...+|++.++++.+ .+..++++||+.|+..++..+.. +++.||+.++.|.+..........
T Consensus 57 r~~~pt~~~Le~~lA~l~G--~~~al~~~sG~~Ai~~~l~al~~--------~Gd~Vv~~~~~y~~~~~~~~~~~~---- 122 (386)
T PRK06767 57 RLGNPTVKLFEERMAVLEG--GEEALAFGSGMAAISATLIGFLK--------AGDHIICSNGLYGCTYGFLEVLEE---- 122 (386)
T ss_pred CCCCcchHHHHHHHHHHhC--CCcEEEECCHHHHHHHHHHHHhC--------CCCEEEEcCCcHHHHHHHHHHHHh----
Confidence 5667778899999999995 45678889999999988876654 567888877766443221111110
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
....+..+++.+ |+++++++++ +++++|++|. ++|++|.+.+ +++|.++|
T Consensus 123 -----~~gi~~~~~~~~-----------------d~~~l~~~i~---~~tklV~les-p~NptG~v~d----l~~I~~la 172 (386)
T PRK06767 123 -----KFMITHSFCDME-----------------TEADIENKIR---PNTKLIFVET-PINPTMKLID----LKQVIRVA 172 (386)
T ss_pred -----hcCeEEEEeCCC-----------------CHHHHHHhhC---cCceEEEEeC-CCCCCceecC----HHHHHHHH
Confidence 011122233222 6788888885 4678999998 9999997777 99999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCCcccc-EEEEEcHHHHHhhhccCCcccccccCCCC
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPL-SLVMTTDKIYNSIYYKNNINIFLHSHSYS 309 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~~~i-g~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 309 (430)
+++|+++|+||+|+ .+..+.. . ....|++ +++|.++|...++ |+++++++.++.+.. ..+. ..++.
T Consensus 173 ~~~g~~vivD~a~a-~~~~~~p--l---~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~--~~~~-~~g~~-- 241 (386)
T PRK06767 173 KRNGLLVIVDNTFC-SPYLQRP--L---ELGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIR--PMRK-DIGGI-- 241 (386)
T ss_pred HHcCCEEEEECCCc-ccccCCc--h---hcCCcEEEecCcceecCCCCceeEEEEeChHHHHHHHH--HHHH-HhCCC--
Confidence 99999999999986 2111111 1 1234665 5669998733565 788888877655432 0000 11121
Q ss_pred CCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcCCCee---------eEeecceEEEEEEeecCCccchhHH
Q psy14484 310 GNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKII---------NFRQKGMIWAFDVIIEDPEQIETFS 380 (430)
Q Consensus 310 ~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~a 380 (430)
.+++.+..+...|+.+ +...++.++++.++.+.|++.+....+. ..++.|.++.|++. .+ ...+
T Consensus 242 ~~~~~a~l~~~~L~tl--~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~-~~----~~~~ 314 (386)
T PRK06767 242 MAPFDAWLLLRGLKTL--AVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIK-GG----KEET 314 (386)
T ss_pred CCHHHHHHHHcCCCcH--HHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEc-CC----HHHH
Confidence 2455444444444322 2244666778888888887653222111 12356788888886 42 1124
Q ss_pred HHHHHHHHHCCcEEe----------e------------------cCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 381 KKFFVAALKNELLLR----------P------------------IGNTVYLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 381 ~~~~~~l~~~Gv~~~----------~------------------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
.+|.+.|...++.++ | ..+.+||++.+. +.+.+++.|+++|+.
T Consensus 315 ~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE----~~~dl~~dl~~al~~ 385 (386)
T PRK06767 315 QAFINDLHFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGLE----SWEDIVSDLEQALKK 385 (386)
T ss_pred HHHHHhCCccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEeccC----CHHHHHHHHHHHHhh
Confidence 678888765554332 1 025688876644 466667777776654
No 270
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.75 E-value=4.9e-16 Score=149.94 Aligned_cols=287 Identities=12% Similarity=0.153 Sum_probs=172.2
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
.+..+...++++.++++++ .+.+++++||++|+..++..+.. +++.||+..+.|.+.....
T Consensus 57 r~~~p~~~~le~~la~l~g--~~~~v~~ssG~~Ai~~al~al~~--------~Gd~Vi~~~~~y~~t~~~~--------- 117 (390)
T PRK08133 57 RFTNPTVTMFQERLAALEG--AEACVATASGMAAILAVVMALLQ--------AGDHVVSSRSLFGSTVSLF--------- 117 (390)
T ss_pred CCCChHHHHHHHHHHHHhC--CCcEEEECCHHHHHHHHHHHHhC--------CCCEEEEccCcchhHHHHH---------
Confidence 4567788999999999984 46789999999999999887754 5678888777775532211
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
.........++.+++.. |+++++++++ +++++|++|. ++|++|.+.+ +++|.++|
T Consensus 118 ~~~~~~~G~~v~~vd~~-----------------d~~~l~~~i~---~~tklV~ie~-p~NptG~v~d----l~~I~~la 172 (390)
T PRK08133 118 EKIFARFGIETTFVDLT-----------------DLDAWRAAVR---PNTKLFFLET-PSNPLTELAD----IAALAEIA 172 (390)
T ss_pred HHHHHHcCcEEEEECCC-----------------CHHHHHHhcC---cCCeEEEEEC-CCCCCCCcCC----HHHHHHHH
Confidence 11111122333444432 6788888885 5788999998 9999998876 99999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCCcccc-EEEEEcHHHHHhhhccCCcccccccCCCC
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPL-SLVMTTDKIYNSIYYKNNINIFLHSHSYS 309 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~~~i-g~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 309 (430)
+++|+++|+|+++... ..... ....+|++ +++|.+++...++ |++++++++++.+.. ........
T Consensus 173 ~~~gi~livD~t~~~~-~~~~p-----l~~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~------~~~~~g~~ 240 (390)
T PRK08133 173 HAAGALLVVDNCFCTP-ALQQP-----LKLGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFG------FLRTAGPT 240 (390)
T ss_pred HHcCCEEEEECCCccc-ccCCc-----hhhCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHH------HHHHhCCC
Confidence 9999999999997522 11111 12234665 5679998743566 566677776655442 11112223
Q ss_pred CCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchh-----cCCCee----------eEeecceEEEEEEeecCCc
Q psy14484 310 GNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKII----------NFRQKGMIWAFDVIIEDPE 374 (430)
Q Consensus 310 ~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~-----~~~~~~----------~~~~~g~~~~~~~~~~~~~ 374 (430)
.++..+..+...++.+. ...++..++...+.+.|++.. .+|... ...+-|.++.|++. .+
T Consensus 241 ~~~~~a~~~l~gl~tl~--~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~-~~-- 315 (390)
T PRK08133 241 LSPFNAWVFLKGLETLS--LRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVK-GG-- 315 (390)
T ss_pred CCHHHHHHHHcccchHH--HHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEc-CC--
Confidence 34554444333333221 122334445555555555321 122211 13466889999987 42
Q ss_pred cchhHHHHHHHHHH--HCCc--------EEee------------------cCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 375 QIETFSKKFFVAAL--KNEL--------LLRP------------------IGNTVYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 375 ~~~~~a~~~~~~l~--~~Gv--------~~~~------------------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
.+.+.+|.+.|. ..+. +..| ..+.+|+++.+. +.+.+++.|+++|+
T Consensus 316 --~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE----~~~dl~~dl~~al~ 389 (390)
T PRK08133 316 --REAAWRVIDATRLISITANLGDTKTTITHPATTTHGRLSPEARAAAGITEGLIRVAVGLE----DVADIKADLARGLA 389 (390)
T ss_pred --HHHHHHHHHhCCcceEeccCCCcceeeecCCCCCcccCCHHHHHhcCCCCCeEEEEeCcC----CHHHHHHHHHHHhh
Confidence 112345666543 1111 1111 025789976644 46666777776664
No 271
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.75 E-value=4.9e-16 Score=150.47 Aligned_cols=257 Identities=12% Similarity=0.096 Sum_probs=163.0
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
+++.+...+|++.++++.+ .+.+++++||++|+..++..... +++.||+.++.|.........
T Consensus 60 r~~~p~~~~Le~~iA~~~g--~~~~l~~~sG~~Ai~~al~~ll~--------~Gd~Vl~~~~~y~~~~~~~~~------- 122 (400)
T PRK06234 60 RLGNPTSTEVENKLALLEG--GEAAVVAASGMGAISSSLWSALK--------AGDHVVASDTLYGCTFALLNH------- 122 (400)
T ss_pred CCCCccHHHHHHHHHHHhC--CCcEEEEcCHHHHHHHHHHHHhC--------CCCEEEEecCccchHHHHHHH-------
Confidence 5567888899999999995 45789999999999988876654 567888888777554222111
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
..........+++.. |+++++++++ +++++|++|. ++|++|.+.+ +++|.++|
T Consensus 123 --~~~~~G~~v~~vd~~-----------------d~e~l~~~i~---~~tklI~ies-P~NPtG~v~d----l~~I~~la 175 (400)
T PRK06234 123 --GLTRYGVEVTFVDTS-----------------NLEEVRNALK---ANTKVVYLET-PANPTLKVTD----IKAISNIA 175 (400)
T ss_pred --HHhhCCeEEEEECCC-----------------CHHHHHHHhc---cCCeEEEEEC-CCCCCCCcCC----HHHHHHHH
Confidence 001111222333322 7888998885 4678999998 9999997777 99999999
Q ss_pred Hhc--CCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCCcccc-EEEEEcHHHHHhhhccCCcccccccCC
Q psy14484 233 NNY--NIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPL-SLVMTTDKIYNSIYYKNNINIFLHSHS 307 (430)
Q Consensus 233 ~~~--gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~~~i-g~~~~~~~~~~~~~~~~~~~~~~~~~t 307 (430)
+++ |+++|+||+|... ..+.. .+...|++ +++|.++|...++ |++++++++++.+... ......+
T Consensus 176 ~~~~~~i~livDea~~~~-~~~~~-----l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~----~~~~~~g 245 (400)
T PRK06234 176 HENNKECLVFVDNTFCTP-YIQRP-----LQLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLF----GIKDMTG 245 (400)
T ss_pred HhcCCCCEEEEECCCCch-hcCCc-----hhhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHH----HHHHhcC
Confidence 997 9999999998732 22211 12235665 5679998732454 8889998887766530 0011122
Q ss_pred CCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhc-----CCCee----------eEeecceEEEEEEeecC
Q psy14484 308 YSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-----HPKII----------NFRQKGMIWAFDVIIED 372 (430)
Q Consensus 308 ~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~-----~~~~~----------~~~~~g~~~~~~~~~~~ 372 (430)
...++..+..+...|+.+ +...++..++..++.+.|+.... +|.+. ...+.|.++.|++. .+
T Consensus 246 ~~l~p~~a~l~~~~l~tl--~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~-~~ 322 (400)
T PRK06234 246 SVIGPFEAFLIIRGMKTL--QIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELK-GG 322 (400)
T ss_pred CCCCHHHHHHHHhccCcH--HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEec-Cc
Confidence 344566555555444432 23445566677777777764311 22211 12356888899887 42
Q ss_pred CccchhHHHHHHHHHHHC
Q psy14484 373 PEQIETFSKKFFVAALKN 390 (430)
Q Consensus 373 ~~~~~~~a~~~~~~l~~~ 390 (430)
.+.+.+|.+.|.--
T Consensus 323 ----~~~~~~f~~~l~~~ 336 (400)
T PRK06234 323 ----VEEGKVVMNNVKLA 336 (400)
T ss_pred ----HHHHHHHHHhCCcc
Confidence 11245677776533
No 272
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.75 E-value=7.2e-16 Score=147.79 Aligned_cols=236 Identities=15% Similarity=0.186 Sum_probs=150.3
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCcc
Q psy14484 72 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 151 (430)
Q Consensus 72 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~ 151 (430)
.++.++...+|++.++++.+. +..++++||++|+..++. +.. ++++||+.++.|++.......
T Consensus 47 ~r~~~pt~~~le~~la~l~g~--~~~~~~~sG~~ai~~~~~-ll~--------~Gd~Vl~~~~~y~~t~~~~~~------ 109 (366)
T PRK08247 47 SRTGNPTRGVLEQAIADLEGG--DQGFACSSGMAAIQLVMS-LFR--------SGDELIVSSDLYGGTYRLFEE------ 109 (366)
T ss_pred cCCCCchHHHHHHHHHHHhCC--CcEEEEcCHHHHHHHHHH-HhC--------CCCEEEEecCCcCcHHHHHHH------
Confidence 467788899999999999953 456889999999987764 332 567899999999874221111
Q ss_pred chhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHH
Q psy14484 152 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 231 (430)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l 231 (430)
.......+..+++.. |+++++++++ +++++|++|. ++|+.+.... +++|.++
T Consensus 110 ---~~~~~G~~v~~vd~~-----------------d~~~l~~~i~---~~tklv~le~-P~NP~~~~~d----l~~I~~l 161 (366)
T PRK08247 110 ---HWKKWNVRFVYVNTA-----------------SLKAIEQAIT---PNTKAIFIET-PTNPLMQETD----IAAIAKI 161 (366)
T ss_pred ---HhhccCceEEEECCC-----------------CHHHHHHhcc---cCceEEEEEC-CCCCCCcHHH----HHHHHHH
Confidence 011112233444332 7888998885 4678888887 7777765444 9999999
Q ss_pred HHhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCC-CccccEEEEEc-HHHHHhhhccCCcccccccCC
Q psy14484 232 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITG-GYLPLSLVMTT-DKIYNSIYYKNNINIFLHSHS 307 (430)
Q Consensus 232 ~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~g-G~~~ig~~~~~-~~~~~~~~~~~~~~~~~~~~t 307 (430)
|+++|+++|+||+|... ..... .....|++ ++||.++| +-...|+++++ +++.+.+.. .....+
T Consensus 162 a~~~g~~lIvD~t~~~~-~~~~p-----~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~------~~~~~g 229 (366)
T PRK08247 162 AKKHGLLLIVDNTFYTP-VLQRP-----LEEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAY------YQNAAG 229 (366)
T ss_pred HHHcCCEEEEECCCccc-cccCc-----hhcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHH------HHHhcC
Confidence 99999999999998411 11111 11234554 68899986 22467778876 566665543 112223
Q ss_pred CCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcCCCeee--EeecceEEEEEEe
Q psy14484 308 YSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIIN--FRQKGMIWAFDVI 369 (430)
Q Consensus 308 ~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~--~~~~g~~~~~~~~ 369 (430)
...++..+..+...|+.+. ...++.+++.+.+.+.|++. |.+.. .++.|.++.|++.
T Consensus 230 ~~~s~~~a~l~~~~l~tl~--~r~~~~~~~a~~l~~~L~~~---p~v~~v~~P~~gg~~sf~~~ 288 (366)
T PRK08247 230 AVLSPFDSWLLIRGMKTLA--LRMRQHEENAKAIAAFLNEQ---PGVTDVLYPGRGGMLSFRLQ 288 (366)
T ss_pred CCCChHHHHHHHhccCcHH--HHHHHHHHHHHHHHHHHHhC---CCeeEEecCCcCcEEEEEEC
Confidence 3445655555544554332 23344566666666766643 54433 4557889998875
No 273
>PRK07049 methionine gamma-lyase; Validated
Probab=99.75 E-value=4.2e-16 Score=151.69 Aligned_cols=295 Identities=14% Similarity=0.142 Sum_probs=178.3
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCcc
Q psy14484 72 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 151 (430)
Q Consensus 72 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~ 151 (430)
.++.++....|++.|+++. +.+.+++++||++|+..++..+.. +++.|++..+.|.++.......
T Consensus 78 ~R~~~Pt~~~Le~~lA~le--g~~~~iv~~sG~~Ai~~~l~al~~--------~Gd~Vv~~~p~Y~~~~~~~~~~----- 142 (427)
T PRK07049 78 SRFNHPNSEIVEDRLAVYE--GAESAALFSSGMSAIATTLLAFVR--------PGDVILHSQPLYGGTETLLAKT----- 142 (427)
T ss_pred cCCCCcCHHHHHHHHHHHh--CCCcEEEEccHHHHHHHHHHHHhC--------CCCEEEEcCCCcccHHHHHHHH-----
Confidence 3567788889999999998 456799999999999999987775 6688999999998874332110
Q ss_pred chhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhC--CCCeEEEEEccccccCCCcccCChHHHHHHH
Q psy14484 152 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKN--HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVR 229 (430)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~ 229 (430)
+.....+ .+.+++. .|++++++.+.+. .+++++|+++. ++|++|.+.+ .+.+.+|.
T Consensus 143 ----l~~~Gi~--~v~~~~~--------------~d~~~l~~~l~~~~~~~~tklv~les-P~NPtg~v~d-~~~l~~la 200 (427)
T PRK07049 143 ----FRNFGVG--AVGFADG--------------LSEAAIGAAAEAAAAKGRVSLILIET-PANPTNSLVD-VAAVRRVA 200 (427)
T ss_pred ----HHhcCcE--EEEEeCC--------------CCHHHHHHHHHhhccCCCceEEEEEC-CCCCCCcccC-HHHHHHHH
Confidence 0001111 1222211 1566777666532 24688999998 9999996654 44444444
Q ss_pred HHHHh---cCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCC-CccccEEEEEcHHHHHhhhccCCccccc
Q psy14484 230 EICNN---YNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITG-GYLPLSLVMTTDKIYNSIYYKNNINIFL 303 (430)
Q Consensus 230 ~l~~~---~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~g-G~~~ig~~~~~~~~~~~~~~~~~~~~~~ 303 (430)
+.|++ +++++|+||++.+..... .. ....|++ ++||.++| +.+++|++++++++.+.+.. ..
T Consensus 201 ~~~~~~~~~~~~vvvDety~~~~~~~---pl---~~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~------~~ 268 (427)
T PRK07049 201 DAIEARQGHRPIIACDNTLLGPVFQK---PL---EHGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRA------LR 268 (427)
T ss_pred HHhhhcccCCCEEEEECCccccccCC---cc---ccCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHH------HH
Confidence 44332 799999999976442211 11 1124554 78999995 33899999999988877764 11
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhc-----CCCe--e----------eEeecceEEEE
Q psy14484 304 HSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-----HPKI--I----------NFRQKGMIWAF 366 (430)
Q Consensus 304 ~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~-----~~~~--~----------~~~~~g~~~~~ 366 (430)
.......++..+..+...|+.+. ...++..++++.+.+.|++... +|.. . ...+-|.++.|
T Consensus 269 ~~~g~~ls~~~a~l~~r~L~tl~--~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~ 346 (427)
T PRK07049 269 SAIGTQLDPHSCWMLGRSLETLV--LRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSF 346 (427)
T ss_pred HhcCCCCCHHHHHHHHcCCChHH--HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEE
Confidence 22223456666666655555332 1234445666666676664321 2211 0 12356889999
Q ss_pred EEeecCCccchhHHHHHHHHHH--HCCc--------EEee------------------cCCEEEEeCCCCCCHHHHHHHH
Q psy14484 367 DVIIEDPEQIETFSKKFFVAAL--KNEL--------LLRP------------------IGNTVYLMPPYILNKNEIQHMT 418 (430)
Q Consensus 367 ~~~~~~~~~~~~~a~~~~~~l~--~~Gv--------~~~~------------------~~~~lR~~~~~~~t~e~i~~~~ 418 (430)
++. .+ .+.+.+|.+.|. ..++ +..| ..+.+||++.+ |+.+.++
T Consensus 347 ~~~-~~----~~~~~~f~~~l~l~~~~~slG~~~sli~~~~~~~h~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~ 417 (427)
T PRK07049 347 DIK-GG----QAAAFRFLNALQIFKLAVSLGGTESLASHPASMTHSGVPADVRERIGVLESTIRLSIGI----EHPDDLI 417 (427)
T ss_pred EEc-CC----HHHHHHHHHcCcccEEcccCCCCCceeeCCCccccccCCHHHHHhcCCCcCeEEEEeCc----CCHHHHH
Confidence 987 42 112355666653 1111 1111 02568997664 3566666
Q ss_pred HHHHHHHH
Q psy14484 419 SAIFQTFN 426 (430)
Q Consensus 419 ~~l~~~l~ 426 (430)
+.|+++|+
T Consensus 418 ~dl~~al~ 425 (427)
T PRK07049 418 ADLAQALD 425 (427)
T ss_pred HHHHHHHh
Confidence 66766665
No 274
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.75 E-value=4.3e-16 Score=150.34 Aligned_cols=252 Identities=13% Similarity=0.126 Sum_probs=162.7
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
++..+..+++++.++++.+ .+.+++++||++|+..++..+.. +++.||+.++.|++........
T Consensus 60 r~~~p~~~~le~~lA~l~g--~~~~i~~ssG~~Ai~~~l~all~--------~GD~Vi~~~~~y~~~~~~~~~~------ 123 (398)
T PRK08249 60 RNTNPTVQAFEEKVRILEG--AEAATAFSTGMAAISNTLYTFLK--------PGDRVVSIKDTYGGTNKIFTEF------ 123 (398)
T ss_pred CCCChHHHHHHHHHHHHhC--CCeEEEeCChHHHHHHHHHHhcC--------CCCEEEEcCCchHHHHHHHHHH------
Confidence 5677888999999999984 46788889999999999887654 5678999999997642111110
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
......++.+++.. |+++++++++ +++++|++|. ++|++|.+.+ +++|.++|
T Consensus 124 ---~~~~Gi~v~~vd~~-----------------d~e~l~~~i~---~~tklV~ie~-p~NPtg~v~d----l~~I~~la 175 (398)
T PRK08249 124 ---LPRMGVDVTLCETG-----------------DHEQIEAEIA---KGCDLLYLET-PTNPTLKIVD----IERLAAAA 175 (398)
T ss_pred ---HhhCCeEEEEcCCC-----------------CHHHHHHhcC---CCCeEEEEEC-CCCCCCccCC----HHHHHHHH
Confidence 00011122222221 7889998885 4678899988 8899998877 99999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCCcccc-EEEEEcHHHHHhhhccCCcccccccCCCC
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPL-SLVMTTDKIYNSIYYKNNINIFLHSHSYS 309 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~~~i-g~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 309 (430)
+++|+++|+|++|+.+. .... .....|++ +++|.++|....+ |++++++++.+.+.. ........
T Consensus 176 ~~~gi~livD~t~a~~~-~~~~-----l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~------~~~~~g~~ 243 (398)
T PRK08249 176 KKVGALVVVDNTFATPI-NQNP-----LALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYH------YREINGAT 243 (398)
T ss_pred HHcCCEEEEECCcCccc-cCCc-----hhhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHH------HHHhcCCC
Confidence 99999999999987331 1111 12235655 5779998732455 566777888776654 12223334
Q ss_pred CCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchh-----cCCCee----------eEeecceEEEEEEeecCCc
Q psy14484 310 GNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKII----------NFRQKGMIWAFDVIIEDPE 374 (430)
Q Consensus 310 ~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~-----~~~~~~----------~~~~~g~~~~~~~~~~~~~ 374 (430)
.++..+..+...|+.+. ...++..++++.+.+.|++.. .+|++. ...+-|.++.|++. .+
T Consensus 244 ~s~~~a~l~l~~l~tL~--~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~-~~-- 318 (398)
T PRK08249 244 MDPMSAYLILRGMKTLK--LRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLK-GG-- 318 (398)
T ss_pred CCHHHHHHHHhCcchHH--HHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEc-CC--
Confidence 56665655555555442 234555667777777776431 123221 12467889999987 43
Q ss_pred cchhHHHHHHHHH
Q psy14484 375 QIETFSKKFFVAA 387 (430)
Q Consensus 375 ~~~~~a~~~~~~l 387 (430)
.+.+.+|.+.|
T Consensus 319 --~~~~~~f~~~l 329 (398)
T PRK08249 319 --MDTVKRLLPKL 329 (398)
T ss_pred --HHHHHHHHHhC
Confidence 12235566654
No 275
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.75 E-value=5e-16 Score=149.65 Aligned_cols=317 Identities=9% Similarity=0.005 Sum_probs=190.6
Q ss_pred CHH-HHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCC-CCeEEEcC-CchHHHHHHHHHHHHhhhhcCCCCCcE
Q psy14484 52 NSY-INKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYK-LGHCFYGS-DGASAVEVALKMSFHYWYNKGFLNKKK 128 (430)
Q Consensus 52 ~p~-v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~-sgteA~~~al~~~~~~~~~~g~~~~~~ 128 (430)
+|+ |.+++.+...... ++.........+.++.++++++.. .++|+|++ |||++++.++..+.. +++..
T Consensus 24 ~~~~v~~a~~~~~~~~~--hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~-------~~~~~ 94 (378)
T PRK03080 24 RPGWQLEALADALLGRS--HRQKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLG-------ARRVD 94 (378)
T ss_pred ChHHHHHHHHhhhcccC--cCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCC-------CCcce
Confidence 567 8888876532111 111223466678888999999753 34788886 999999999887632 12333
Q ss_pred EEEEcCCCCCcchhhhccCCCccchhhhhccCC-CeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEE
Q psy14484 129 FICLQNSYHGETLGALAVTNIQSFKEIYTSLLN-KTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIII 207 (430)
Q Consensus 129 vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ 207 (430)
++. .+.|+........ ..... ++..++.+..... |+++ ++. ++.|.+
T Consensus 95 vi~--~g~f~~~~~~~~~----------~~~g~~~v~~~~~~~g~~~------------d~~~----i~~----~~~V~~ 142 (378)
T PRK03080 95 HLA--WESFGSKWATDVV----------KQLKLEDPRVLEADYGSLP------------DLSA----VDF----DRDVVF 142 (378)
T ss_pred EEE--eCHHHHHHHHHHH----------hhcCCCCceEeccCCCCCC------------CHhh----cCC----CCCEEE
Confidence 333 4566653221000 00112 3344443321111 4444 221 234667
Q ss_pred ccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeee--cccCCCccccEEEEE
Q psy14484 208 EPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITGGYLPLSLVMT 285 (430)
Q Consensus 208 ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s--K~l~gG~~~ig~~~~ 285 (430)
.. +.+.+|...| +++|.+ +++|+++++|.+|+ +|.. .+.++ . .|++++| |.|++. ..+|.+++
T Consensus 143 ~h-~~t~tG~~~p----i~~I~~--~~~g~~~vVDa~qs-~G~~--pidv~--~--iD~~~~s~~K~l~~P-~G~g~l~v 207 (378)
T PRK03080 143 TW-NGTTTGVRVP----VARWIG--ADREGLTICDATSA-AFAL--PLDWS--K--LDVYTFSWQKVLGGE-GGHGMAIL 207 (378)
T ss_pred Ee-cCCccceecc----chhhcc--ccCCCeEEEecccc-cccC--CCCHH--H--CcEEEEehhhhCCCC-CceEEEEE
Confidence 77 8888999998 889888 88999999999987 5432 22222 2 4888777 888774 35899999
Q ss_pred cHHHHHhhhcc--CCc--------c-----c-ccccCCCC-CCHHHHHHHHHHHHHHhhc-C---HHHHHHHHHHHHHHH
Q psy14484 286 TDKIYNSIYYK--NNI--------N-----I-FLHSHSYS-GNPLACCAALATLEIFNKD-N---ILQRISQDMKKITKA 344 (430)
Q Consensus 286 ~~~~~~~~~~~--~~~--------~-----~-~~~~~t~~-~~~~~~~aa~~~l~~~~~~-~---~~~~~~~~~~~l~~~ 344 (430)
+++..+.+.+. +.. . . .....|.+ .+..+..+..++|+.+.+. . ..++.+++.+++++.
T Consensus 208 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~ 287 (378)
T PRK03080 208 SPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDW 287 (378)
T ss_pred CHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 99988765531 000 0 0 01122332 3444555556788877653 3 346667788888888
Q ss_pred HHchhcCCCee--eEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-----CCEEEEeCCCCCCHHHHHHH
Q psy14484 345 LTSLITHPKII--NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----GNTVYLMPPYILNKNEIQHM 417 (430)
Q Consensus 345 l~~l~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-----~~~lR~~~~~~~t~e~i~~~ 417 (430)
|+++....... .....+.++.+.+. + .. ......+...+.++|+++..+ ++.+|++++.+++++||+.+
T Consensus 288 l~~~~~~~~~~~~~~~~s~~i~~~~~~-~-~~--~~~~~~~~~~l~~~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l 363 (378)
T PRK03080 288 AEKTPWATPLVADPATRSNTSVTLDFV-D-AQ--AAVDAAAVAKLLRENGAVDIEPYRDAPNGLRIWCGPTVEPADVEAL 363 (378)
T ss_pred HHhCCCcccccCCccccCccEEEEEcC-C-ch--HHHHHHHHHHHHHcCCeeccccccCCCCcEEEecCCCCCHHHHHHH
Confidence 87663221111 11112345666554 3 00 011234666777778887643 36899999999999999999
Q ss_pred HHHHHHHHHHh
Q psy14484 418 TSAIFQTFNEV 428 (430)
Q Consensus 418 ~~~l~~~l~~~ 428 (430)
+++|+++++++
T Consensus 364 ~~al~~~~~~~ 374 (378)
T PRK03080 364 TPWLDWAFERL 374 (378)
T ss_pred HHHHHHHHHHH
Confidence 99999988754
No 276
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.74 E-value=4.5e-15 Score=143.24 Aligned_cols=301 Identities=11% Similarity=0.084 Sum_probs=178.0
Q ss_pred HHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhh-----------------------hhcCCCCCcEEEEEcCCCCC
Q psy14484 82 LSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYW-----------------------YNKGFLNKKKFICLQNSYHG 138 (430)
Q Consensus 82 l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~-----------------------~~~g~~~~~~vl~~~~~yhg 138 (430)
..+...+++++....|- ..||+.||.+++.++.... ..|..-+.++|+.++..--|
T Consensus 100 ~~~ra~~lf~a~~anvq-p~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GG 178 (493)
T PRK13580 100 AAEHAKELFGAEHAYVQ-PHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGG 178 (493)
T ss_pred HHHHHHHHhCCCccccc-CCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCC
Confidence 33556667754544444 3599999999988877520 00000016889988655544
Q ss_pred cchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcc
Q psy14484 139 ETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMI 218 (430)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~ 218 (430)
+..-. +...+..........+++..... .|.+++++.+.+ .+..+++.. ..+.++ .
T Consensus 179 Hlthg--------~~~n~~~~~~~~~~y~vd~~~g~-----------iD~d~l~~~~~~---~~plvii~g-~S~~~~-~ 234 (493)
T PRK13580 179 HLTHG--------FRPNISGKMFHQRSYGVDPDTGL-----------LDYDEIAALARE---FKPLILVAG-YSAYPR-R 234 (493)
T ss_pred eeecC--------cccchhhheeeeEecccCcccCc-----------cCHHHHHHHHhh---cCCEEEEeC-ccccCC-C
Confidence 42211 11111111111222222211111 288999999974 333444445 444444 6
Q ss_pred cCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccC--CCCCcee--eeecccCCCccccEEEEEcHHHHHhhh
Q psy14484 219 MYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHA--EIWPDFL--CLSKGITGGYLPLSLVMTTDKIYNSIY 294 (430)
Q Consensus 219 ~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~--~~~~d~~--~~sK~l~gG~~~ig~~~~~~~~~~~~~ 294 (430)
.| +++|.++|+++|+++++|++|+ +|-.|.....+.. -...|++ |++|+|.|. ..|++++++++.+.+.
T Consensus 235 ~d----l~~i~eia~~~gA~L~VD~AH~-~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP--~GG~I~~~~~l~~~L~ 307 (493)
T PRK13580 235 VN----FAKLREIADEVGAVLMVDMAHF-AGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGP--RGGLVLAKKEYADAVD 307 (493)
T ss_pred cC----HHHHHHHHHHcCCEEEEECchh-hceeccccchhhcCCCCCCcEEEeCChhhccCC--CeEEEEecHHHHHHHh
Confidence 66 9999999999999999999997 5444321111101 1146766 467999653 3578899999888875
Q ss_pred ccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcC---HHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeec
Q psy14484 295 YKNNINIFLHSHSYSGNPLACCAALATLEIFNKDN---ILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIE 371 (430)
Q Consensus 295 ~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~---~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~ 371 (430)
. .+++.+++.. .+ ..+++..++..+.+++ +.+++.++.++|++.|++. +++.+.. .....++.+.+. +
T Consensus 308 ~---a~P~i~gg~l--~p-~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~-G~~vv~g-gTdshIV~V~lg-~ 378 (493)
T PRK13580 308 K---GCPLVLGGPL--PH-VMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKR-GARLVTG-GTDNHLVLIDVT-S 378 (493)
T ss_pred h---CCCcccCCCc--cH-HHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhc-CCCccCC-CCCCCEEEEEeC-C
Confidence 4 2344443322 22 3333333455444333 6788999999999999876 3332211 123355566665 3
Q ss_pred CCccchhHHHHHHHHHHHCCcEEeec-----------CCEEEEeCCC----CCCHHHHHHHHHHHHHHHHH
Q psy14484 372 DPEQIETFSKKFFVAALKNELLLRPI-----------GNTVYLMPPY----ILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 372 ~~~~~~~~a~~~~~~l~~~Gv~~~~~-----------~~~lR~~~~~----~~t~e~i~~~~~~l~~~l~~ 427 (430)
.. . ....+.+.|.+.||.+.+. ...|||+++. .++++|++++++.|.+++..
T Consensus 379 ~~--~--~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~ 445 (493)
T PRK13580 379 FG--L--TGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSN 445 (493)
T ss_pred HH--H--HHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHh
Confidence 11 1 1235677899999998731 3579999888 55799999999999988764
No 277
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.74 E-value=1.1e-15 Score=147.80 Aligned_cols=352 Identities=14% Similarity=0.144 Sum_probs=193.2
Q ss_pred EEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHH
Q psy14484 28 LIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAV 107 (430)
Q Consensus 28 ~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~ 107 (430)
+....|..||||.+-.|+ ..+.++..+++..+.. .+..+....+|++.+++.+ +.+++++++||++|+
T Consensus 14 ~~l~~~~v~iDlltds~t-------~ams~~~~~a~~~gd~---~Y~~~~g~~~Leeaia~~~--g~~~vv~t~~Gt~Al 81 (431)
T cd00617 14 FLLRSEDVYIDLLTDSGT-------GAMSDYQWAAMMLGDE---AYAGSKSFYDLEDAVQDLF--GFKHIIPTHQGRGAE 81 (431)
T ss_pred EeCCCCCcCCCCCCCCCc-------HHHHHHHHHHHHhCCC---ccCCCCCHHHHHHHHHHHH--CCCeEEEcCCHHHHH
Confidence 334466788998876443 3444444444444332 1334455668888888888 557999999999999
Q ss_pred HHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHH-HH
Q psy14484 108 EVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA-RC 186 (430)
Q Consensus 108 ~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 186 (430)
..++++... +++.| ...++|..+.......+..+ +.++.+..... .....+. .-
T Consensus 82 ~la~~al~~--------pGD~V-~~~~~f~~~~~~i~~~Ga~p-------------v~v~i~~~~~~---~~~~pf~gni 136 (431)
T cd00617 82 NILFSILLK--------PGRTV-PSNMHFDTTRGHIEANGAVP-------------VDLVIDEAHDA---QELIPFKGNI 136 (431)
T ss_pred HHHHHHhCC--------CCCEE-ccCCcccchHHHHHhCCCEe-------------EEEeccccccc---ccccCCCCCc
Confidence 999987754 44544 45666655433222222221 22222110000 0000000 01
Q ss_pred HHHHHHHHHHhC-CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC----C------CCccccc
Q psy14484 187 AIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVG----C------GRTGKFF 255 (430)
Q Consensus 187 d~~~le~~l~~~-~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g----~------g~~g~~~ 255 (430)
|++.|++.+.+. ..++++|+++. .+|++|..+.+.+.+++|.++|++||++||.|+++.- | +..+...
T Consensus 137 D~e~Le~~I~~~~~~~~~~I~v~~-p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si 215 (431)
T cd00617 137 DVAKLEKLIDEVGAENIPYIVLTI-TNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSI 215 (431)
T ss_pred CHHHHHHHhCcccCCCccEEEEEC-CcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCH
Confidence 899999999754 23577777776 6676544778889999999999999999999999651 1 1111110
Q ss_pred c---cccCCCCCceeeee--cccCCCccccE-EEEEcH-HHHHhhhccCCcccccccCCCCCCHHHHHHHHH-HHHHHhh
Q psy14484 256 A---CEHAEIWPDFLCLS--KGITGGYLPLS-LVMTTD-KIYNSIYYKNNINIFLHSHSYSGNPLACCAALA-TLEIFNK 327 (430)
Q Consensus 256 ~---~~~~~~~~d~~~~s--K~l~gG~~~ig-~~~~~~-~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~-~l~~~~~ 327 (430)
. .+... ..|..++| |..+ .++| ++++++ ++++.+.... .......++++......++.+ +|+...+
T Consensus 216 ~ei~~e~~s-~sd~~~mS~~K~~~---~~~GG~i~~~d~~l~~~~~~~~--~~~~~~~~~gG~~~r~~~A~A~gL~e~~~ 289 (431)
T cd00617 216 AEIAREMFS-YADGCTMSAKKDGL---VNIGGFLALRDDELYEEARQRV--VLYEGFVTYGGMAGRDMEALAQGLREAVE 289 (431)
T ss_pred HHHHHHhhc-cCCEEEEEeecCCC---CccceEEEeCcHHHHHHHHHhc--cccCCccccccccHHHHHHHHHHHHhccc
Confidence 0 00001 13444444 3332 2444 688875 5877765300 000111123332222222333 5543212
Q ss_pred cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecC--Cccchh-HHHHHHHHHH-HCCcEEee-------
Q psy14484 328 DNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIED--PEQIET-FSKKFFVAAL-KNELLLRP------- 396 (430)
Q Consensus 328 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~-~a~~~~~~l~-~~Gv~~~~------- 396 (430)
.+......+..+++.+.|++. +.|.+. +..|.+++++.. .- ...... -+..|+.+|. +.||....
T Consensus 290 ~~~l~~~~~~r~~l~~~L~~~-G~~v~~--P~Ggh~v~~d~~-~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~ 365 (431)
T cd00617 290 EDYLRHRVEQVRYLGDRLDEA-GVPIVE--PAGGHAVFIDAR-EFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAG 365 (431)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCCccC--CCcceEEEEEhH-HhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecc
Confidence 233333333457777888765 333321 233444444443 20 000000 1356776554 44777542
Q ss_pred ----c-------CCEEEEeCCC-CCCHHHHHHHHHHHHHHHHH
Q psy14484 397 ----I-------GNTVYLMPPY-ILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 397 ----~-------~~~lR~~~~~-~~t~e~i~~~~~~l~~~l~~ 427 (430)
. -+.+|+.++. ..|.++++.+.++|..++++
T Consensus 366 ~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 366 RDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred cCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhh
Confidence 1 1568998887 56999999999999988764
No 278
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.74 E-value=3.1e-15 Score=153.08 Aligned_cols=310 Identities=13% Similarity=0.115 Sum_probs=193.9
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEEcC-CchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhh
Q psy14484 77 KPVIKLSEKLSSLTQYKLGHCFYGS-DGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEI 155 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~v~~~~-sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~ 155 (430)
....++++++++++ +.+.+.+-+ ||+.+..+++.+++.|+..+|.++|++||+ +.+-|++........
T Consensus 543 q~i~elq~~l~eLt--Gmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLI-p~saHgtNpasa~~~-------- 611 (954)
T PRK12566 543 AMIDELEAWLCAIT--GFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLI-PSSAHGTNPASAQMA-------- 611 (954)
T ss_pred HHHHHHHHHHHHHH--CCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEe-cccccccCHHHHHHC--------
Confidence 55678889999999 666666666 888998899999999999999877766555 457777654432222
Q ss_pred hhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhc
Q psy14484 156 YTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNY 235 (430)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~ 235 (430)
..+++.++.+.+... |+++|++.++++.+++++|++.. +++.++...+ +++|.++|+++
T Consensus 612 ----GieVv~Vp~D~~G~i------------Dle~L~a~I~~~~~~laaVmiT~-Pnt~Gv~e~~----V~eI~~iah~~ 670 (954)
T PRK12566 612 ----GMRVVIVECDPDGNV------------DLDDLKAKAAAAGDRLSCLMITY-PSTHGVYEEG----IREICEVVHQH 670 (954)
T ss_pred ----CCEEEEeccCCCCCc------------CHHHHHHHhhccCCCEEEEEEEe-cCcCceecch----HHHHHHHHHHc
Confidence 233345554322222 89999999986667888888866 5555543333 99999999999
Q ss_pred CCEEEEeccccCCCCccccccccc-CCCCCceeeee--cccC----CCccccEEEEEcHHHHHhhhccC-------Cccc
Q psy14484 236 NIHLIADEIAVGCGRTGKFFACEH-AEIWPDFLCLS--KGIT----GGYLPLSLVMTTDKIYNSIYYKN-------NINI 301 (430)
Q Consensus 236 gi~li~DEv~~g~g~~g~~~~~~~-~~~~~d~~~~s--K~l~----gG~~~ig~~~~~~~~~~~~~~~~-------~~~~ 301 (430)
|+++++|-++. .+-. .+.. -.+..|+++++ |.++ +|+.-+|.+.+++.+...+..-+ +.+.
T Consensus 671 Galv~vDgA~~-~a~~----~l~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ 745 (954)
T PRK12566 671 GGQVYMDGANL-NAQV----GLARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNN 745 (954)
T ss_pred CCEEEEEeeCh-hhcc----CCCChhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCC
Confidence 99999999886 2111 1111 23457998876 8664 34345777777876655444211 0111
Q ss_pred ccccCCCCCCHHHHHHHHHHHHHHhhcCHHH---HHHHHHHHHHHHHHchhcCCCeeeEeecce-EE--EEEEeecCCcc
Q psy14484 302 FLHSHSYSGNPLACCAALATLEIFNKDNILQ---RISQDMKKITKALTSLITHPKIINFRQKGM-IW--AFDVIIEDPEQ 375 (430)
Q Consensus 302 ~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~---~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~-~~--~~~~~~~~~~~ 375 (430)
...+....++.+.+.+++..++.+..+ +.+ ....++.++.++|.+. .+... ....+. +. .+.+. .-+..
T Consensus 746 ga~S~~~~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~--~~v~~-~~~~~~~~hEfii~~~-~l~~~ 820 (954)
T PRK12566 746 GAVSAAPWGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGGA--FPVLY-RGRNERVAHECILDLR-PLKAQ 820 (954)
T ss_pred CceeecccchHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhh--CCCCc-CCCCCCeeeEEEEEcc-ccccc
Confidence 111122223333344555666665444 332 1244788888888653 22211 111111 11 12221 11100
Q ss_pred chhHHHHHHHHHHHCCcEEe----ecCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 376 IETFSKKFFVAALKNELLLR----PIGNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 376 ~~~~a~~~~~~l~~~Gv~~~----~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
....+..+.++|.+.|+... |..+.+|++|....+++|||+++++|+++..++
T Consensus 821 ~g~~~~dvakRL~d~Gihapt~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e~ 877 (954)
T PRK12566 821 TGISEEDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAEI 877 (954)
T ss_pred cCCCHHHHHHHHHHCCcEEeEEeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHH
Confidence 00113679999999888654 346799999999999999999999999988764
No 279
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.73 E-value=4e-15 Score=143.46 Aligned_cols=312 Identities=16% Similarity=0.146 Sum_probs=183.0
Q ss_pred HHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHH-HHhhhhcCCCCCcEEEE
Q psy14484 53 SYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMS-FHYWYNKGFLNKKKFIC 131 (430)
Q Consensus 53 p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~-~~~~~~~g~~~~~~vl~ 131 (430)
++-.+++.+.+.... ....+...++++.+++.++ .+.+++++||++|+.++++++ .. +++.||+
T Consensus 14 ~~e~~~~~~~l~~~~-----~~~g~~~~~le~~la~~~g--~~~~v~~~sgt~al~lal~al~~~--------~Gd~Viv 78 (379)
T PRK11658 14 DEELAAVKEVLRSGW-----ITTGPKNQALEQAFCQLTG--NQHAIAVSSATAGMHITLMALGIG--------PGDEVIT 78 (379)
T ss_pred HHHHHHHHHHHHcCC-----ccCCHhHHHHHHHHHHHhC--CCeEEEECCHHHHHHHHHHHcCCC--------CCCEEEE
Confidence 555777777765432 1234567899999999994 457899999999999999876 33 5678999
Q ss_pred EcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEcccc
Q psy14484 132 LQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLV 211 (430)
Q Consensus 132 ~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v 211 (430)
.+++|.+........ ....++++.+..... .|+++++++++ +++++|+ | +
T Consensus 79 ~~~~~~~~~~~~~~~-------------G~~~v~vd~~~~~~~-----------~d~~~l~~~i~---~~tkav~--~-~ 128 (379)
T PRK11658 79 PSLTWVSTLNMIVLL-------------GATPVMVDVDRDTLM-----------VTPEAIEAAIT---PRTKAII--P-V 128 (379)
T ss_pred CCCcHHHHHHHHHHc-------------CCEEEEEecCCCcCC-----------cCHHHHHHhcc---cCCeEEE--E-e
Confidence 888887653322221 123344444321111 17889999885 4577766 3 3
Q ss_pred ccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-CCCCcccccccccCCCCCceeeee--cccCCCccccEEEEEc-H
Q psy14484 212 QCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-GCGRTGKFFACEHAEIWPDFLCLS--KGITGGYLPLSLVMTT-D 287 (430)
Q Consensus 212 ~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~-g~g~~g~~~~~~~~~~~~d~~~~s--K~l~gG~~~ig~~~~~-~ 287 (430)
+. +|...+ +++|.++|+++|+++|+|++|+ |....|.. ....+ .++.+|+ |.+++| ..|+++.+ +
T Consensus 129 ~~-~G~~~d----~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~--~g~~g--~~~~Sf~~~K~l~~g--~GG~v~~~~~ 197 (379)
T PRK11658 129 HY-AGAPAD----LDAIRAIGERYGIPVIEDAAHAVGTYYKGRH--IGARG--TAIFSFHAIKNITCA--EGGLVVTDDD 197 (379)
T ss_pred CC-CCCcCC----HHHHHHHHHHcCCeEEEECCCccCCeECCee--cCCCC--CEEEeCCCCCcCccc--CceEEEECCH
Confidence 33 565555 8999999999999999999997 33222221 11223 3677777 677664 56777764 6
Q ss_pred HHHHhhhc---cCCcc-cc--------------cccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchh
Q psy14484 288 KIYNSIYY---KNNIN-IF--------------LHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI 349 (430)
Q Consensus 288 ~~~~~~~~---~~~~~-~~--------------~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~ 349 (430)
++.+.+.. .+... .+ ..+..+..+.+.++.++..|+.+ ++..++-+++.+++.+.|+++.
T Consensus 198 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l--~~~~~~r~~~a~~~~~~L~~~~ 275 (379)
T PRK11658 198 ELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQLAKL--EALNARRREIAARYLQALADLP 275 (379)
T ss_pred HHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCCC
Confidence 66655432 11000 00 00111222333333333333322 4466777778888888887652
Q ss_pred cCCCee-eEeecce--EEEEEEeecCCccchhHHHHHHHHHHHCCcEEee-------------------c-------CCE
Q psy14484 350 THPKII-NFRQKGM--IWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP-------------------I-------GNT 400 (430)
Q Consensus 350 ~~~~~~-~~~~~g~--~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~-------------------~-------~~~ 400 (430)
...... ....... ++.+.+. ....... .+++.+.|.++||-+.. . ...
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 352 (379)
T PRK11658 276 FQPLSLPAWPHQHAWHLFIIRVD-EERCGIS--RDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERI 352 (379)
T ss_pred CccCcCCCCCCceeEEEEEEEEC-CccccCC--HHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCe
Confidence 111101 1001112 2223322 1110011 36789999999976541 0 134
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 401 VYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 401 lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
+.+-++...++++++.+++.|++++
T Consensus 353 l~lP~~~~l~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 353 CSLPLFPDMTDADVDRVITALQQIA 377 (379)
T ss_pred EEccCCCCCCHHHHHHHHHHHHHHH
Confidence 5555566689999999999998875
No 280
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.73 E-value=3e-15 Score=144.76 Aligned_cols=254 Identities=15% Similarity=0.142 Sum_probs=159.7
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCcc
Q psy14484 72 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 151 (430)
Q Consensus 72 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~ 151 (430)
..+..+...++++.++++.+. +..++++||++|+..++..+.. +++.|++..+.|++........
T Consensus 55 ~R~~~p~~~~Le~~lA~l~g~--~~~v~~~sG~~Ai~~~l~all~--------pGD~Vvv~~p~Y~~t~~~~~~~----- 119 (405)
T PRK08776 55 TRSGNPTRDLLGEALAELEGG--AGGVITATGMGAINLVLNALLQ--------PGDTLVVPHDAYGGSWRLFNAL----- 119 (405)
T ss_pred cCCCChHHHHHHHHHHHHhCC--CceEEEcCHHHHHHHHHHHHhC--------CCCEEEEccCCchHHHHHHHHH-----
Confidence 366778888999999999863 4566778889999998887754 6678999899997632111110
Q ss_pred chhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHH
Q psy14484 152 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 231 (430)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l 231 (430)
.......+..++.. |+++++++++ +++++|+++. ++|++|.+.. +++|.++
T Consensus 120 ----~~~~g~~v~~v~~~-----------------d~~~l~~~i~---~~tklV~l~~-P~NPtG~v~d----l~~I~~l 170 (405)
T PRK08776 120 ----AKKGHFALITADLT-----------------DPRSLADALA---QSPKLVLIET-PSNPLLRITD----LRFVIEA 170 (405)
T ss_pred ----HHhcCcEEEEECCC-----------------CHHHHHHhcC---cCCeEEEEEC-CCCCCCccCC----HHHHHHH
Confidence 00011122333321 6788888885 4678888888 8889997765 9999999
Q ss_pred HHhcCCEEEEeccccCCCCcccccccccCCCCCceee--eecccCC-CccccEEEEE-cHHHHHhhhccCCcccccccCC
Q psy14484 232 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITG-GYLPLSLVMT-TDKIYNSIYYKNNINIFLHSHS 307 (430)
Q Consensus 232 ~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~--~sK~l~g-G~~~ig~~~~-~~~~~~~~~~~~~~~~~~~~~t 307 (430)
|+++|+++|+||+|..-... .. . ....|+++ .+|.++| |....|+++. ++++.+.+.. ......
T Consensus 171 a~~~gi~vIvD~a~a~~~~~-~p--l---~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~------~~~~~g 238 (405)
T PRK08776 171 AHKVGALTVVDNTFLSPALQ-KP--L---EFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVW------WANALG 238 (405)
T ss_pred HHHcCCEEEEECCCcccccC-Cc--c---cccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHH------HHHhcC
Confidence 99999999999998632111 11 1 23456664 5598876 2244677766 4666665543 112223
Q ss_pred CCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhc-----CCCee----------eEeecceEEEEEEeecC
Q psy14484 308 YSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-----HPKII----------NFRQKGMIWAFDVIIED 372 (430)
Q Consensus 308 ~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~-----~~~~~----------~~~~~g~~~~~~~~~~~ 372 (430)
...+++.+......++.+ +...++..++...+.+.|++.+. +|... ...+-|.++.|++. .+
T Consensus 239 ~~~s~~~a~l~~~gl~tl--~~r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~-~~ 315 (405)
T PRK08776 239 LTGSPFDAFLTLRGLRTL--DARLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELE-GG 315 (405)
T ss_pred CCCCHHHHHHHHhhhCcH--HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEc-CC
Confidence 345777776666555544 23456667777777777764321 22211 12467889999987 42
Q ss_pred CccchhHHHHHHHHHH
Q psy14484 373 PEQIETFSKKFFVAAL 388 (430)
Q Consensus 373 ~~~~~~~a~~~~~~l~ 388 (430)
.+.+.+|.+.|.
T Consensus 316 ----~~~~~~f~~~l~ 327 (405)
T PRK08776 316 ----EAAVRAFVDGLR 327 (405)
T ss_pred ----HHHHHHHHHhCC
Confidence 111345666553
No 281
>KOG0634|consensus
Probab=99.72 E-value=6.2e-15 Score=135.23 Aligned_cols=288 Identities=14% Similarity=0.104 Sum_probs=188.8
Q ss_pred eEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCC
Q psy14484 96 HCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNIN 175 (430)
Q Consensus 96 ~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (430)
.+++|+|.+.+.+.+++.++. ..+.|++-..+|........ + .++.++|++-+..+.
T Consensus 126 diiit~G~t~~l~~~l~~~~N--------~gd~vlie~~ty~~AL~s~~-------------a--~gv~~ipv~md~~Gi 182 (472)
T KOG0634|consen 126 DIIITNGNTDGLFKVLRTLIN--------RGDHVLIEEYTYPSALQSME-------------A--LGVKIIPVKMDQDGI 182 (472)
T ss_pred eEEEecCCchHHHHHHHHhhc--------CCCceEEecccchHHHHhcc-------------c--cCceEEeccccCCCC
Confidence 799999999999999999997 67889988888864322111 1 123566666544443
Q ss_pred CCCChhHHHHHHHHHHHHHHHhCC------CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCC
Q psy14484 176 KGNSANEIARCAIFDLEILLKKNH------NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG 249 (430)
Q Consensus 176 ~~~~~~~~~~~d~~~le~~l~~~~------~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g 249 (430)
+++.|++.+.... .+..+..+-|..+|++| ...+.+--++|.++|+|||+++|.||+|--+-
T Consensus 183 -----------~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG-~tls~errk~iy~LArKyDfLIVeDdpYy~Lq 250 (472)
T KOG0634|consen 183 -----------DPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTG-NTLSLERRKKIYQLARKYDFLIVEDDPYYFLQ 250 (472)
T ss_pred -----------CHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCC-CccCHHHHHHHHHHHHHcCEEEEecCccceee
Confidence 7899999998762 24667777777899999 55667778999999999999999999986221
Q ss_pred Cc---cc-----------cc---------ccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccC
Q psy14484 250 RT---GK-----------FF---------ACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSH 306 (430)
Q Consensus 250 ~~---g~-----------~~---------~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (430)
.. +. .+ ..+..|....+-+|||-++.| +|+|++.+++.+++.+.. .....
T Consensus 251 ~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPG-lRlG~it~~~~~l~ril~------~ae~~ 323 (472)
T KOG0634|consen 251 MNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPG-LRLGWITGNSLFLKRILD------LAEVA 323 (472)
T ss_pred ccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCc-ceeEEeecCHHHHHHHhh------hccee
Confidence 11 11 00 001111112233899999999 899999999987776554 22345
Q ss_pred CCCCCHHHHHHHHHHHHHHhhcCHHHHHHH-------HHHHHHHHHHchhcCCCe-e--eEeecceEEEEEEee--cCCc
Q psy14484 307 SYSGNPLACCAALATLEIFNKDNILQRISQ-------DMKKITKALTSLITHPKI-I--NFRQKGMIWAFDVII--EDPE 374 (430)
Q Consensus 307 t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~-------~~~~l~~~l~~l~~~~~~-~--~~~~~g~~~~~~~~~--~~~~ 374 (430)
|.+++.+.+....++|+.+.++++.+.+.+ ++..+...|. ...|.- . -.+..|+|+++++.. .+..
T Consensus 324 t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~--kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~ 401 (472)
T KOG0634|consen 324 TSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALD--KYLPKSVCEYHPPKAGMFIWVEIPYINFDTK 401 (472)
T ss_pred ecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCCCCeeEEecCCcceEEEEEecccccccc
Confidence 556677777778888887666544433333 2333333332 233431 2 235567777777741 1111
Q ss_pred cc-hhHHHHHHHHHHHCCcEEeec-----------CC-EEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 375 QI-ETFSKKFFVAALKNELLLRPI-----------GN-TVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 375 ~~-~~~a~~~~~~l~~~Gv~~~~~-----------~~-~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.. .+.-+.+...+.++||.+.++ .. ++|++.++ .+.|++++.+++|..++.+-
T Consensus 402 ~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~-a~~e~l~~g~~rf~~~ike~ 467 (472)
T KOG0634|consen 402 KSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAF-AEPEKLDEGIERFGSVIKEH 467 (472)
T ss_pred cchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeec-CCHHHHHHHHHHHHHHHHHH
Confidence 11 112245666788999988764 12 78888774 46679999999999998763
No 282
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.72 E-value=1.1e-14 Score=139.66 Aligned_cols=312 Identities=14% Similarity=0.074 Sum_probs=188.2
Q ss_pred HHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEE
Q psy14484 53 SYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICL 132 (430)
Q Consensus 53 p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~ 132 (430)
++..+++.+.+..... ....+...++++.+++.+ +.+++++++||++|+..+++++.. .+++.||+.
T Consensus 11 ~~e~~a~~~~~~~~~~----~~~g~~~~~~e~~la~~~--g~~~~v~~~sgt~aL~~~l~al~~-------~pGd~Viv~ 77 (376)
T TIGR02379 11 GQELEYIAEAISEGKL----SGDGPFSRRCETWLENRT--GTKKALLTPSCTAALEMAALLLDI-------QPGDEVIMP 77 (376)
T ss_pred HHHHHHHHHHHHcCCc----cCCcHHHHHHHHHHHHHh--CCCeEEEeCCHHHHHHHHHHHcCC-------CCcCEEEEC
Confidence 5557777777655321 123466788999999887 667899999999999998876521 167889999
Q ss_pred cCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccc
Q psy14484 133 QNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQ 212 (430)
Q Consensus 133 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~ 212 (430)
+++|.+........ ....++++.+...... |++++++.++ +++++|+ | ++
T Consensus 78 ~~t~~~~~~~~~~~-------------G~~~v~vd~d~~~~~~-----------d~~~le~~i~---~~tk~Ii--p-~~ 127 (376)
T TIGR02379 78 SYTFVSTANAFVLR-------------GAKIVFVDIRPDTMNI-----------DETLIESAIT---HRTKAIV--P-VH 127 (376)
T ss_pred CCCcHHHHHHHHHc-------------CCEEEEEecCCCcCCC-----------CHHHHHHhcC---cCceEEE--E-eC
Confidence 88887653332221 1233445443221111 7888998885 4677775 3 43
Q ss_pred cCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeee----cccCCCccccEEEEEc-H
Q psy14484 213 CAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS----KGITGGYLPLSLVMTT-D 287 (430)
Q Consensus 213 ~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s----K~l~gG~~~ig~~~~~-~ 287 (430)
.+|...+ +++|.++|++||+++|.|++|+ ++.. +.-...+..-|+.+|| |.++.| .+.|+++.+ +
T Consensus 128 -~~G~~~d----~~~I~~la~~~~i~vIeDaa~~-~g~~---~~~~~~g~~~~~~~fSf~~~K~l~~g-~~gG~v~~~~~ 197 (376)
T TIGR02379 128 -YAGVACD----MDTIMALANKHQLFVIEDAAQG-VMST---YKGRALGSIGHLGTFSFHETKNYTSG-GEGGALLINDQ 197 (376)
T ss_pred -CCCCccC----HHHHHHHHHHCCCEEEEECccc-cCCc---cCCcccCCCCCEEEEeCCCCCcCccc-CCceEEEECCH
Confidence 3565555 8999999999999999999997 4321 1111223334788888 988876 478888776 6
Q ss_pred HHHHhhhcc---CCcc-c-c----------cccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhc--
Q psy14484 288 KIYNSIYYK---NNIN-I-F----------LHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-- 350 (430)
Q Consensus 288 ~~~~~~~~~---~~~~-~-~----------~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~-- 350 (430)
++.+.+..- +... . . ..+..+-.+.+.++.+.+.|+.+ +++.++-++..++..+.|..+..
T Consensus 198 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l--~~~~~~r~~~~~~y~~~L~~~~~~~ 275 (376)
T TIGR02379 198 AFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQA--DRINQDRLATWQLYQDALKPLEEKG 275 (376)
T ss_pred HHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCccHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHhccCCcCC
Confidence 776655431 1110 0 0 01222233344444455555544 33555566666677777765421
Q ss_pred ---CCCee-eEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec---------------------------CC
Q psy14484 351 ---HPKII-NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI---------------------------GN 399 (430)
Q Consensus 351 ---~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~---------------------------~~ 399 (430)
.+... .....-.++.+.+. . . .. .+++.+.|.++||...+. .+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~i~~~-~-~--~~--r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~ 349 (376)
T TIGR02379 276 IIELPSIPNGCQHNAHMFYIKLK-D-E--DD--RNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESER 349 (376)
T ss_pred eeeCCCCCCCCeeeeEEEEEEEC-C-c--CC--HHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhc
Confidence 11111 11110012233333 2 1 11 368999999999876520 12
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 400 TVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 400 ~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
.+.+-++...++++++.+++.|++++
T Consensus 350 ~l~LP~~~~l~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 350 LVRLPLYYGLSKEDQARVIQTICDYL 375 (376)
T ss_pred eEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 45555556689999999999998865
No 283
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.72 E-value=3.8e-15 Score=143.24 Aligned_cols=254 Identities=11% Similarity=0.133 Sum_probs=160.5
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCcc
Q psy14484 72 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 151 (430)
Q Consensus 72 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~ 151 (430)
.+++++....|+++|+++.+ .+.+++++||++|+..++..... ++++|++.++.|++..........
T Consensus 47 ~R~~~pt~~~L~~~lA~l~g--~~~~i~~~sg~~Ai~~~l~~l~~--------~GD~Vl~~~~~y~~~~~~~~~~~~--- 113 (386)
T PRK08045 47 SRRGNPTRDVVQRALAELEG--GAGAVLTNTGMSAIHLVTTVFLK--------PGDLLVAPHDCYGGSYRLFDSLAK--- 113 (386)
T ss_pred eCCCCccHHHHHHHHHHHhC--CCeEEEECCHHHHHHHHHHHHcC--------CCCEEEEcCCCcHHHHHHHHHHHh---
Confidence 46778888999999999985 35799999999999999887654 678899999999864321111110
Q ss_pred chhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHH
Q psy14484 152 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 231 (430)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l 231 (430)
.....+.+++.. |+++++++++ +++++|+++. ++|++|.+.+ +++|.++
T Consensus 114 ------~~gi~v~~vd~~-----------------d~e~l~~~l~---~~tklV~l~s-P~NPtG~v~d----i~~I~~i 162 (386)
T PRK08045 114 ------RGCYRVLFVDQG-----------------DEQALRAALA---EKPKLVLVES-PSNPLLRVVD----IAKICHL 162 (386)
T ss_pred ------hCCeEEEEeCCC-----------------CHHHHHHhcc---cCCeEEEEEC-CCCCCCEecC----HHHHHHH
Confidence 000111222211 6788888885 4678888898 9999997777 8999999
Q ss_pred HHhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCC-ccccEEEEE-cHHHHHhhhccCCcccccccCC
Q psy14484 232 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGG-YLPLSLVMT-TDKIYNSIYYKNNINIFLHSHS 307 (430)
Q Consensus 232 ~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG-~~~ig~~~~-~~~~~~~~~~~~~~~~~~~~~t 307 (430)
|+++|+++|+||+|..... ... .....|++ +++|.++|. ....|++++ ++++.+.+.. .....+
T Consensus 163 a~~~g~~vivDeay~~~~~-~~p-----l~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~------~~~~~g 230 (386)
T PRK08045 163 AREAGAVSVVDNTFLSPAL-QNP-----LALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAW------WANNIG 230 (386)
T ss_pred HHHcCCEEEEECCCCcccc-CCc-----hhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHH------HHHhcC
Confidence 9999999999999863311 111 12234665 577999862 245777766 4666665543 112223
Q ss_pred CCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchh-----cCCCee----------eEeecceEEEEEEeecC
Q psy14484 308 YSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKII----------NFRQKGMIWAFDVIIED 372 (430)
Q Consensus 308 ~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~-----~~~~~~----------~~~~~g~~~~~~~~~~~ 372 (430)
...+++.+..+...|+.+. ...++..+++..+.+.|+..+ .+|.+. ...+-|.++.|++. .+
T Consensus 231 ~~~~p~~~~l~~rgl~tl~--~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~-~~ 307 (386)
T PRK08045 231 VTGGAFDSYLLLRGLRTLV--PRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELD-GD 307 (386)
T ss_pred CCCCHHHHHHHHhhhccHH--HHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEec-Cc
Confidence 3456666665555554332 223455555666666665321 122211 12467889999987 42
Q ss_pred CccchhHHHHHHHHHH
Q psy14484 373 PEQIETFSKKFFVAAL 388 (430)
Q Consensus 373 ~~~~~~~a~~~~~~l~ 388 (430)
. +.+.+|.+.|.
T Consensus 308 ~----~~~~~f~~~l~ 319 (386)
T PRK08045 308 E----QTLRRFLGGLS 319 (386)
T ss_pred H----HHHHHHHHhcc
Confidence 1 11345666653
No 284
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.72 E-value=2.9e-15 Score=144.88 Aligned_cols=257 Identities=13% Similarity=0.130 Sum_probs=158.8
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCcc
Q psy14484 72 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 151 (430)
Q Consensus 72 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~ 151 (430)
..+.++...++++.++++. +.+++++++||+.|+..++..+.. ++++|++....|.+.......
T Consensus 65 ~r~~~p~~~~le~~lA~l~--g~~~al~~~sG~~Ai~~~l~all~--------~Gd~Vl~~~~~~~~t~~~~~~------ 128 (403)
T PRK07810 65 SRYGNPTVSMFEERLRLIE--GAEACFATASGMSAVFTALGALLG--------AGDRLVAARSLFGSCFVVCNE------ 128 (403)
T ss_pred eCCCCchHHHHHHHHHHHh--CCCcEEEECChHHHHHHHHHHHhC--------CCCEEEEccCCcchHHHHHHH------
Confidence 3567788899999999998 456899999999999998877654 567788776555443211111
Q ss_pred chhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHH
Q psy14484 152 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 231 (430)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l 231 (430)
........+.+++.. |+++++++++ +++++|++|. ++|++|.+.+ +++|.++
T Consensus 129 ---~~~~~G~~v~~vd~~-----------------d~~~l~~ai~---~~tklV~~es-p~Nptg~v~d----l~~I~~l 180 (403)
T PRK07810 129 ---ILPRWGVETVFVDGE-----------------DLSQWEEALS---VPTQAVFFET-PSNPMQSLVD----IAAVSEL 180 (403)
T ss_pred ---HHHHcCcEEEEECCC-----------------CHHHHHHhcC---cCceEEEEEC-CCCCCCeecC----HHHHHHH
Confidence 111112233444322 7889999885 4688999999 9999997776 9999999
Q ss_pred HHhcCCEEEEeccccCCCCcccccccccCCCCCceee--eecccCCCcccc-EEEEEcHHHHH-hhhccCCcccccccCC
Q psy14484 232 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGGYLPL-SLVMTTDKIYN-SIYYKNNINIFLHSHS 307 (430)
Q Consensus 232 ~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~--~sK~l~gG~~~i-g~~~~~~~~~~-~~~~~~~~~~~~~~~t 307 (430)
|+++|+++|+||+|+ .+..... . ....|+++ ++|.++|....+ |+++++++... .+.. ......
T Consensus 181 a~~~g~~vivD~a~a-~~~~~~~--~---~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~------~~~~~g 248 (403)
T PRK07810 181 AHAAGAKVVLDNVFA-TPLLQRG--L---PLGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQK------LMRHTG 248 (403)
T ss_pred HHHcCCEEEEECCCC-ccccCCh--h---hcCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHH------HHHHhC
Confidence 999999999999986 2111111 1 22357664 569998722466 67777776543 2332 111122
Q ss_pred CCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhc-----CCCeee----------EeecceEEEEEEeecC
Q psy14484 308 YSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-----HPKIIN----------FRQKGMIWAFDVIIED 372 (430)
Q Consensus 308 ~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~-----~~~~~~----------~~~~g~~~~~~~~~~~ 372 (430)
...++..++.++..|+.+. ...++..+++.++.+.|++... +|.... ..+-|.++.|++. ..
T Consensus 249 ~~~s~~~a~l~l~~L~tl~--~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~-~~ 325 (403)
T PRK07810 249 PALSAFNAWVLLKGLETLA--LRVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELD-AP 325 (403)
T ss_pred CCCCHHHHHHHHhccCcHH--HHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEc-CC
Confidence 2446666666666565442 2345555566666666654321 222111 1266889999987 42
Q ss_pred CccchhHHHHHHHHH
Q psy14484 373 PEQIETFSKKFFVAA 387 (430)
Q Consensus 373 ~~~~~~~a~~~~~~l 387 (430)
.....+.+.+|++.|
T Consensus 326 ~~~~~~~~~~f~~~l 340 (403)
T PRK07810 326 EDAAKKRAFEVLDKL 340 (403)
T ss_pred CCcCHHHHHHHHHhC
Confidence 110111235566654
No 285
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.72 E-value=1.5e-15 Score=146.01 Aligned_cols=253 Identities=11% Similarity=0.130 Sum_probs=160.3
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCcc
Q psy14484 72 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 151 (430)
Q Consensus 72 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~ 151 (430)
.+++++...++++.++++.+ .+.+++++||++|+..++..+.. +++.|++..++|.+.......+....
T Consensus 46 ~R~~~p~~~~le~~lA~l~g--~~~v~~~~gg~~Ai~~~l~all~--------~GD~Vl~~~p~y~~~~~~~~~~~~~~- 114 (382)
T TIGR02080 46 SRSGNPTRDLLQQALAELEG--GAGAVVTNTGMSAIHLVTTALLG--------PDDLLVAPHDCYGGTYRLLNALAKKG- 114 (382)
T ss_pred cCCCCchHHHHHHHHHHHhC--CCcEEEEcCHHHHHHHHHHHHcC--------CCCEEEEcCCCcHHHHHHHHHHHhhc-
Confidence 36778888999999999985 47899999999999999987754 66889999999976432211111100
Q ss_pred chhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHH
Q psy14484 152 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 231 (430)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l 231 (430)
...+..++.. |+++++++++ +++++|+++. ++|++|...+ +++|.++
T Consensus 115 --------~~~v~~~d~~-----------------d~~~l~~ai~---~~tklV~l~~-p~NPtG~~~d----l~~I~~l 161 (382)
T TIGR02080 115 --------CFRVLFVDQG-----------------DEQALRAALA---QKPKLVLIET-PSNPLLRVVD----IAKICHL 161 (382)
T ss_pred --------CeEEEEECCC-----------------CHHHHHHhcC---cCceEEEEEC-CCCCCCEecC----HHHHHHH
Confidence 0111222111 6788888885 4678888888 8999997776 8999999
Q ss_pred HHhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCC-CccccEEEEE-cHHHHHhhhccCCcccccccCC
Q psy14484 232 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITG-GYLPLSLVMT-TDKIYNSIYYKNNINIFLHSHS 307 (430)
Q Consensus 232 ~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~g-G~~~ig~~~~-~~~~~~~~~~~~~~~~~~~~~t 307 (430)
|+++|+++|+||+|..+... .. .....|++ +++|.++| +.+..|+++. ++++.+.+.. .....+
T Consensus 162 a~~~g~~vvvD~a~~~~~~~-~p-----l~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~------~~~~~g 229 (382)
T TIGR02080 162 AKAVGAVVVVDNTFLSPALQ-NP-----LALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAW------WANNLG 229 (382)
T ss_pred HHHcCCEEEEECCCcccccC-Cc-----hhhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHH------HHHccC
Confidence 99999999999998632111 11 11234655 57798876 3256788776 4666665543 112223
Q ss_pred CCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchh-----cCCCee----------eEeecceEEEEEEeecC
Q psy14484 308 YSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKII----------NFRQKGMIWAFDVIIED 372 (430)
Q Consensus 308 ~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~-----~~~~~~----------~~~~~g~~~~~~~~~~~ 372 (430)
...+++.+..++..++.+.. ..++..+++..+.+.|+... .+|.+. ...+-|.++.|++. ++
T Consensus 230 ~~~sp~~a~l~lr~l~tl~~--R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~-~~ 306 (382)
T TIGR02080 230 VTGGAFDSYLTLRGLRTLVA--RMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELK-GG 306 (382)
T ss_pred CCCCHHHHHHHHcccchHHH--HHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEec-Cc
Confidence 44566665555444543321 24455566666666665321 122211 12467889999997 42
Q ss_pred CccchhHHHHHHHHH
Q psy14484 373 PEQIETFSKKFFVAA 387 (430)
Q Consensus 373 ~~~~~~~a~~~~~~l 387 (430)
. ..+..|.+.|
T Consensus 307 ~----~~~~~f~~~l 317 (382)
T TIGR02080 307 E----QTVRRFLGGL 317 (382)
T ss_pred H----HHHHHHHHcC
Confidence 1 1134566654
No 286
>KOG1358|consensus
Probab=99.72 E-value=9.9e-16 Score=138.40 Aligned_cols=341 Identities=18% Similarity=0.149 Sum_probs=218.0
Q ss_pred EEECCCCEEEecccccccccCCC-CCHHHHHHHHHHHhhcccc--cc--CCCCCHHHHHHHHHHHhhcCCCCCeEEEcCC
Q psy14484 28 LIDVSGKRYLDAISSWWVNLFGH-SNSYINKALKNQLNKLEHV--ML--SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSD 102 (430)
Q Consensus 28 ~~d~~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~--~~--~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~s 102 (430)
-+..||+.+++|.|. +.||. .++++++.+...+.+++-+ ++ ++++.+.+.++.+.|++.+ +.++.++.+-
T Consensus 88 ~~~i~G~~~~N~aS~---NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~--G~E~aivYs~ 162 (467)
T KOG1358|consen 88 HVTIDGKDVLNFASA---NFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFM--GTEDAIVYSY 162 (467)
T ss_pred ceEecCceeecccch---hhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhh--CCcceeeecc
Confidence 456799999999984 77787 5999999999999987533 11 3455578889999999999 5566666677
Q ss_pred chHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhH
Q psy14484 103 GASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANE 182 (430)
Q Consensus 103 gteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (430)
|-.++..++.+.. .+..|++.+-.-+-..--.+.++. ....+ +.+
T Consensus 163 gF~ti~S~ipafs---------KrGDIi~~de~~nfaIq~GlqlSR------------S~i~~--Fkh------------ 207 (467)
T KOG1358|consen 163 GFSTIESAIPAFS---------KRGDIIFVDEAVNFAIQKGLQLSR------------STISY--FKH------------ 207 (467)
T ss_pred ccchhhhcchhhh---------ccCcEEEEehhhhHHHHHHHhhhh------------heeEE--ecC------------
Confidence 7888888888776 344455544333211111111111 11112 222
Q ss_pred HHHHHHHHHHHHHHhCC----------CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcc
Q psy14484 183 IARCAIFDLEILLKKNH----------NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTG 252 (430)
Q Consensus 183 ~~~~d~~~le~~l~~~~----------~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g 252 (430)
||++++|+.+.+.+ ....-+++|. +..++|.+.| +.+|.++..|+...+|+||..+ ||..|
T Consensus 208 ---ndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EG-l~~N~g~i~p----l~~iv~lk~Kyk~RvildEs~S-fG~lg 278 (467)
T KOG1358|consen 208 ---NDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEG-LYANTGDICP----LPEIVKLKNKYKFRVILDESLS-FGVLG 278 (467)
T ss_pred ---CCHHHHHHhccCcchhhhhccccccceEEEEEEe-eccCCCcccc----cHHHHHHHhhheEEEEEecccc-ccccc
Confidence 37888887776542 1145678899 9999999999 9999999999999999999988 55544
Q ss_pred c--ccccccCCCC---Cceeeee--cccCCCccccEEEEEcHHHHH--hhhccCCcccccccCCCCCCHHHHHHHHHHHH
Q psy14484 253 K--FFACEHAEIW---PDFLCLS--KGITGGYLPLSLVMTTDKIYN--SIYYKNNINIFLHSHSYSGNPLACCAALATLE 323 (430)
Q Consensus 253 ~--~~~~~~~~~~---~d~~~~s--K~l~gG~~~ig~~~~~~~~~~--~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~ 323 (430)
. .+..+++++. .|+++.| -+++.++ |..+++.-+.+ .+.. ..+-.+-+..|....+|..+++
T Consensus 279 ~~GrGvteH~~v~~~~iDiv~~sm~~alas~G---gFc~G~~~i~~hQrLSg------~~Y~fSAslPp~la~aa~~ai~ 349 (467)
T KOG1358|consen 279 KTGRGVTEHFGVPITDIDIVTASMETALASGG---GFCAGKSFIADHQRLSG------SGYCFSASLPPYLAGAAIKAIL 349 (467)
T ss_pred ccCccccccCCCCccceeeeeecccccccccC---ceeecceeeEeeeeccc------cceeeeccCchhhhhhHHHHHH
Confidence 4 3456777764 4677665 3555431 33444333221 1221 1111122234556667778888
Q ss_pred HHhh-cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCcc---chhHHHHHHHHHHHCCcEEeec--
Q psy14484 324 IFNK-DNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQ---IETFSKKFFVAALKNELLLRPI-- 397 (430)
Q Consensus 324 ~~~~-~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~a~~~~~~l~~~Gv~~~~~-- 397 (430)
++++ ++..+.++.....+.+.|+....+.. .......++-+.+. ....+ ...+.+++...+..+|+.+...
T Consensus 350 i~~~~p~~~~~L~~k~~~~H~~l~~~s~~~v--~~~~~SPi~hl~l~-~~~~s~e~e~~lL~eivd~~i~~~~ll~~a~~ 426 (467)
T KOG1358|consen 350 IEEWNPEIVQPLRAKVAKFHAALSSNSGFIV--SGSPESPIIHLQLE-RSYGSREKEEKLLEEIVDKCIAEGVLLTRAKY 426 (467)
T ss_pred HHhhCcchhhhhhccccccchhhhcCCceEE--ecCcCCceeeeeec-ccccchHHHHHHHHHHHHHHHhhcceehhhhh
Confidence 7664 66778888888888888875321111 11122233334444 21111 1123467777777778887642
Q ss_pred ---------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 398 ---------GNTVYLMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 398 ---------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
.-+||++++..+++|||+++.+.|+++...++
T Consensus 427 ~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~~~~~~ 467 (467)
T KOG1358|consen 427 LEKLERCPIPPSIRICVSAGMSEEELERAAELIKEVASAVL 467 (467)
T ss_pred hhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHHHHhhC
Confidence 35899999999999999999999999887664
No 287
>PRK06460 hypothetical protein; Provisional
Probab=99.72 E-value=4.5e-15 Score=142.52 Aligned_cols=289 Identities=12% Similarity=0.114 Sum_probs=171.6
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
...++...++++.++++.+. +..+.++||++|+..++..+.. ++++|++..+.|.+......
T Consensus 41 r~~~p~~~~L~~~lA~l~g~--~~~v~~~sG~~ai~~~l~al~~--------~Gd~Vl~~~~~~~~ty~~~~-------- 102 (376)
T PRK06460 41 REANPTVLELTKKIVELENA--EMGVAFSSGMGAISTTALALLK--------PGNSVLVHRDMFGRSYRFFT-------- 102 (376)
T ss_pred CCCCccHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHHhC--------CCCEEEEecCCcCcHHHHHH--------
Confidence 45567788999999999864 3345558888999988887654 56788887766643211100
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
........++..++.. +.+.+++++ .+++++|+++. ++|++|.+.+ +++|.++|
T Consensus 103 -~~~~~~G~~v~~~~~~-----------------~~~~l~~~~---~~~tklV~l~s-p~NPtG~v~d----~~~I~~la 156 (376)
T PRK06460 103 -DYLKNWGVNVDASNPG-----------------SDNIIEKAK---SKRYDVVFVEN-ITNPLLRVVD----ITELSKVC 156 (376)
T ss_pred -HHHHhhCcEEEEECCC-----------------CHHHHHHhc---CCCceEEEEEC-CCCCCCcccC----HHHHHHHH
Confidence 0011111222333221 223344443 25688999999 9999997777 88999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCC-ccccEEEEEcHHHHHhhhccCCcccccccCCCC
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGG-YLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYS 309 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG-~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 309 (430)
+++|+++|+||+|... ... .......|++ ++||.++|. ...+|++++++++++.+.. .....+.+
T Consensus 157 ~~~g~~vivDea~~~~-~~~-----~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~------~~~~~g~~ 224 (376)
T PRK06460 157 KENGSILIVDATFSTP-INQ-----KPLELGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQ------MRRTLGTS 224 (376)
T ss_pred HHcCCEEEEECCcCcc-ccC-----ChhhcCCCEEEeecceeccCCCCceEEEEecCHHHHHHHHH------HHHhcCCC
Confidence 9999999999998632 111 1111234655 688998752 1468899999998877754 11112223
Q ss_pred CCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhc-----CCCee----------eEeecceEEEEEEeecCCc
Q psy14484 310 GNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-----HPKII----------NFRQKGMIWAFDVIIEDPE 374 (430)
Q Consensus 310 ~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~-----~~~~~----------~~~~~g~~~~~~~~~~~~~ 374 (430)
.++..+..+...++.++ ...+++.++++++.+.|++.+. +|.+. ...+.|.++.|++. .+.
T Consensus 225 ~~~~~a~~~l~~~~~l~--~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~-~~~- 300 (376)
T PRK06460 225 LDPHAAYLTLRGIKTLK--IRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVN-GGQ- 300 (376)
T ss_pred CCHHHHHHHHhchhhHH--HHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEc-CcH-
Confidence 34443333333344332 3456677778888887765321 22211 12467889999987 431
Q ss_pred cchhHHHHHHHHHH--HC----C----cEEee------------------cCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 375 QIETFSKKFFVAAL--KN----E----LLLRP------------------IGNTVYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 375 ~~~~~a~~~~~~l~--~~----G----v~~~~------------------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
..+..|.+.|. .. | ++..| .++.+|+++.+ |+.+.+++.|+++|+
T Consensus 301 ---~~~~~~~~~l~~~~~~~s~Gg~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 373 (376)
T PRK06460 301 ---ESALKVMKSLKLIIPAQTLGGVNSVISHPATMSHRTLSLEERKIVGITDSLLRLSVGI----EDVNDLIEDLDRALS 373 (376)
T ss_pred ---HHHHHHHHhCCcceeccCCCCCceEEeCccccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHH
Confidence 11345666552 11 1 11111 02578997664 456666777777766
Q ss_pred Hh
Q psy14484 427 EV 428 (430)
Q Consensus 427 ~~ 428 (430)
.+
T Consensus 374 ~~ 375 (376)
T PRK06460 374 TL 375 (376)
T ss_pred hh
Confidence 43
No 288
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.72 E-value=4.5e-15 Score=142.12 Aligned_cols=279 Identities=14% Similarity=0.109 Sum_probs=170.6
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCcc
Q psy14484 72 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 151 (430)
Q Consensus 72 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~ 151 (430)
..++++...+|+++++++. . +++++++||++|+..++..... ++++||+.+++|+++.......
T Consensus 46 ~ry~~p~~~~Le~~lA~l~--~-~~~v~~~sG~~Ai~~~l~all~--------~Gd~Vl~~~~~y~~~~~~~~~~----- 109 (366)
T PRK07582 46 GRASNPTWRALEAALGELE--G-AEALVFPSGMAAITAVLRALLR--------PGDTVVVPADGYYQVRALAREY----- 109 (366)
T ss_pred ECCCCccHHHHHHHHHHHc--C-CCEEEECCHHHHHHHHHHHhcC--------CCCEEEEeCCCcHhHHHHHHHH-----
Confidence 3567788889999999988 3 5677778889999988876643 5688999999998764322110
Q ss_pred chhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHH
Q psy14484 152 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 231 (430)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l 231 (430)
+.....++.+++..+ +. +. + .+++++|+++. ++|++|.+.+ +++|.++
T Consensus 110 ----l~~~G~~v~~v~~~~----------------~~---~~-~---~~~t~lV~le~-p~NPtg~v~d----i~~I~~~ 157 (366)
T PRK07582 110 ----LAPLGVTVREAPTAG----------------MA---EA-A---LAGADLVLAET-PSNPGLDVCD----LAALAAA 157 (366)
T ss_pred ----HhcCeEEEEEECCCC----------------hH---HH-h---ccCceEEEEEC-CCCCCCCccC----HHHHHHH
Confidence 001112334444321 11 11 2 14678888888 8888887766 9999999
Q ss_pred HHhcCCEEEEecccc-CCCCcccccccccCCCCCcee--eeecccCC-CccccEEEEEc-HHHHHhhhccCCcccccccC
Q psy14484 232 CNNYNIHLIADEIAV-GCGRTGKFFACEHAEIWPDFL--CLSKGITG-GYLPLSLVMTT-DKIYNSIYYKNNINIFLHSH 306 (430)
Q Consensus 232 ~~~~gi~li~DEv~~-g~g~~g~~~~~~~~~~~~d~~--~~sK~l~g-G~~~ig~~~~~-~~~~~~~~~~~~~~~~~~~~ 306 (430)
|+++|+++++||+|. .++. .. ..+.+|++ +++|.++| +.+++|+++++ +++.+.+.. .....
T Consensus 158 a~~~g~~lvVD~t~~~~~~~--~p-----~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~------~~~~~ 224 (366)
T PRK07582 158 AHAAGALLVVDNTTATPLGQ--RP-----LELGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVER------WRLLA 224 (366)
T ss_pred HHHcCCEEEEECCCCCcccc--Cc-----hhcCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHH------HHHHh
Confidence 999999999999985 2211 11 12345766 56799976 22678988875 666665543 11111
Q ss_pred CCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhc-----CCCeee----------EeecceEEEEEEeec
Q psy14484 307 SYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-----HPKIIN----------FRQKGMIWAFDVIIE 371 (430)
Q Consensus 307 t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~-----~~~~~~----------~~~~g~~~~~~~~~~ 371 (430)
....+++.+..+...|+.+ +...++..+++..+.+.|++... +|++.. ..+.|.++.|++. +
T Consensus 225 g~~~~~~~a~l~~r~l~tl--~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~-~ 301 (366)
T PRK07582 225 GAIPGPFEAWLAHRSLGTL--GLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA-D 301 (366)
T ss_pred CCCCCHHHHHHHHhccccH--HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC-C
Confidence 2233555554444444422 22336666777777777765422 222211 1246888889886 3
Q ss_pred CCccchhHHHHHHHHHHHCCcEEe-e-------------------cCCEEEEeCCCCCCHHHHHHHHHHHH
Q psy14484 372 DPEQIETFSKKFFVAALKNELLLR-P-------------------IGNTVYLMPPYILNKNEIQHMTSAIF 422 (430)
Q Consensus 372 ~~~~~~~~a~~~~~~l~~~Gv~~~-~-------------------~~~~lR~~~~~~~t~e~i~~~~~~l~ 422 (430)
. ....+.+.+.++... + .++.||+++++...++.|+.+.++|+
T Consensus 302 ----~----~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~liR~svGlE~~~dli~dl~~al~ 364 (366)
T PRK07582 302 ----A----AAAERFVAASRLVVAATSFGGVHTSADRRARWGDAVPEGFVRLSCGIEDTDDLVADLERALD 364 (366)
T ss_pred ----H----HHHHHHHHhCCcceecccCCCccchhhhHHHcCCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 1 223333333344332 0 12579999998877776766666654
No 289
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.71 E-value=2.3e-15 Score=145.57 Aligned_cols=252 Identities=13% Similarity=0.132 Sum_probs=158.2
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
.+..+...++++.++++.+ .+...+++||+.|+..++..... ++++|++.++.|.+.........
T Consensus 61 r~~~p~~~~Le~~lA~l~G--~~~~~~~~sG~~Ai~~~l~~~l~--------~Gd~Vl~~~~~y~~~~~~~~~~~----- 125 (398)
T PRK07504 61 RYSNPTVDMFEKRMCALEG--AEDARATASGMAAVTAAILCQVK--------AGDHVVAARALFGSCRYVVETLL----- 125 (398)
T ss_pred cCCCchHHHHHHHHHHHhC--CCeeeEecCHHHHHHHHHHHHhC--------CCCEEEEcCCchhHHHHHHHHHH-----
Confidence 5667888999999999984 44556788999999888776543 56789998888876532211100
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
.....++.+++. .|+++++++++ +++++|+++. ++|++|.+.+ +++|.++|
T Consensus 126 ----~~~G~~v~~vd~-----------------~d~e~l~~ai~---~~tklV~les-p~NptG~v~d----l~~I~~la 176 (398)
T PRK07504 126 ----PRYGIESTLVDG-----------------LDLDNWEKAVR---PNTKVFFLES-PTNPTLEVID----IAAVAKIA 176 (398)
T ss_pred ----hhcCeEEEEECC-----------------CCHHHHHHhcC---cCceEEEEEC-CCCCCcEecC----HHHHHHHH
Confidence 011122233321 17889998885 5788999999 9999997777 99999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCCccccE-EEEEcHHHHHh-hhccCCcccccccCCC
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPLS-LVMTTDKIYNS-IYYKNNINIFLHSHSY 308 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~~~ig-~~~~~~~~~~~-~~~~~~~~~~~~~~t~ 308 (430)
+++|+++|+||+|+.. ..... .....|++ +++|.++|...++| ++++++++++. +.. .......
T Consensus 177 ~~~gi~lvvD~a~a~~-~~~~~-----~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~------~~~~~g~ 244 (398)
T PRK07504 177 NQAGAKLVVDNVFATP-LFQKP-----LELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQD------YFRHTGP 244 (398)
T ss_pred HHcCCEEEEECCcccc-ccCCc-----hhhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHH------HHHHhCC
Confidence 9999999999998722 11111 12235666 46799987336786 56666665542 221 0111222
Q ss_pred CCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchh-----cCCCee----------eEeecceEEEEEEeecCC
Q psy14484 309 SGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKII----------NFRQKGMIWAFDVIIEDP 373 (430)
Q Consensus 309 ~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~-----~~~~~~----------~~~~~g~~~~~~~~~~~~ 373 (430)
..++..++.++..|+.+. ...++..++..++.+.|++.. .+|+.. ...+-|.++.|++. ++.
T Consensus 245 ~~s~~~A~~~l~~L~tl~--~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~-~~~ 321 (398)
T PRK07504 245 SLSPFNAWTLLKGLETLP--VRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELK-GGK 321 (398)
T ss_pred CCCHHHHHHHHhccchHH--HHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeC-CCH
Confidence 346666666666665442 234445566777777776432 122221 12355889999997 431
Q ss_pred ccchhHHHHHHHHH
Q psy14484 374 EQIETFSKKFFVAA 387 (430)
Q Consensus 374 ~~~~~~a~~~~~~l 387 (430)
+.+.+|.+.|
T Consensus 322 ----~~~~~~~~~l 331 (398)
T PRK07504 322 ----EAAFRFLNAL 331 (398)
T ss_pred ----HHHHHHHHhC
Confidence 1134566665
No 290
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.71 E-value=1.4e-14 Score=151.83 Aligned_cols=313 Identities=15% Similarity=0.117 Sum_probs=188.9
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEEcC-CchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhh
Q psy14484 77 KPVIKLSEKLSSLTQYKLGHCFYGS-DGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEI 155 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~v~~~~-sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~ 155 (430)
....++.++++++++ ++.+.+.+ +|++++..++.+++.++..+|+..+++| ..+.+-|++....+...
T Consensus 542 ~~i~e~q~~l~eltG--~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~v-lis~~aH~snp~sa~~~-------- 610 (954)
T PRK05367 542 ELIDQLEAWLAEITG--YDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVC-LIPSSAHGTNPASAVMA-------- 610 (954)
T ss_pred HHHHHHHHHHHHHHC--CCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEE-EEEchhhhhhHHHHHHC--------
Confidence 556788899999995 45565555 7778887888778777666665445444 45567777654443322
Q ss_pred hhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhc
Q psy14484 156 YTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNY 235 (430)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~ 235 (430)
..+++.++.+..... |+++|++.++++..++++|++.. .+..|+...+ +++|.++|+++
T Consensus 611 ----G~~vv~v~~d~~G~i------------D~~~L~~~i~~~~~~la~V~it~-pst~G~~e~~----I~eI~~i~h~~ 669 (954)
T PRK05367 611 ----GMKVVVVACDENGNI------------DLDDLRAKAEEHADNLAAIMITY-PSTHGVFEET----IREICEIVHEH 669 (954)
T ss_pred ----CCEEEEECCCCCCCc------------CHHHHHHHHhccCCCeEEEEEEc-CCCCeeecCC----HHHHHHHHHHc
Confidence 234455555433322 89999999986545677776655 4444332355 99999999999
Q ss_pred CCEEEEeccccCCCCcccccccccCCCCCceeeee--cccC----CCccccEEEEEcHHHHHhhhccCC-cccccc-cCC
Q psy14484 236 NIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGIT----GGYLPLSLVMTTDKIYNSIYYKNN-INIFLH-SHS 307 (430)
Q Consensus 236 gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s--K~l~----gG~~~ig~~~~~~~~~~~~~~~~~-~~~~~~-~~t 307 (430)
|+++++|.++.+. -.+ +. .......|+++++ |.++ +|.-.+|.+++++.+...+..... ...... .++
T Consensus 670 G~~v~VDgA~~~a-l~~--l~-~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~ 745 (954)
T PRK05367 670 GGQVYLDGANMNA-QVG--LA-RPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGA 745 (954)
T ss_pred CCEEEEECcChhh-ccC--CC-ChhhcCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcCc
Confidence 9999999998521 111 00 1113347888877 8764 343458888888766544432100 000000 012
Q ss_pred CCCCH----HHHHHHHHHHHHHhhcCHHHHHH---HHHHHHHHHHHchhcCCCee--eEeecceEEEEEEeecCCccchh
Q psy14484 308 YSGNP----LACCAALATLEIFNKDNILQRIS---QDMKKITKALTSLITHPKII--NFRQKGMIWAFDVIIEDPEQIET 378 (430)
Q Consensus 308 ~~~~~----~~~~aa~~~l~~~~~~~~~~~~~---~~~~~l~~~l~~l~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~ 378 (430)
....+ +.+..++..+..+..+.+.+..+ .+++++.++|++.-...... ...... +.+.+. .-+.....
T Consensus 746 v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e--~i~~~~-~~~~~~g~ 822 (954)
T PRK05367 746 VSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVAHE--CILDLR-PLKESTGI 822 (954)
T ss_pred chhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCcccc--eEEEee-cccccCCC
Confidence 22122 23333555566666666766665 78899999987641111100 000111 122221 10100001
Q ss_pred HHHHHHHHHHHCCcEEee----cCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 379 FSKKFFVAALKNELLLRP----IGNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 379 ~a~~~~~~l~~~Gv~~~~----~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.+..+.++|.+.|+.... ..+.++++|....+++|||+++++|+++..++
T Consensus 823 ~~~di~krL~d~G~~~~t~~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e~ 876 (954)
T PRK05367 823 TVDDIAKRLIDYGFHAPTMSFPVAGTLMVEPTESESKAELDRFCDAMIAIRAEI 876 (954)
T ss_pred CHHHHHHHHHHCCCeEeecCCccCCEEEEEeeecCCHHHHHHHHHHHHHHHHHH
Confidence 146799999999987653 25789999999999999999999998887764
No 291
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.71 E-value=3.4e-14 Score=146.40 Aligned_cols=312 Identities=12% Similarity=0.128 Sum_probs=199.1
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhh
Q psy14484 77 KPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIY 156 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~ 156 (430)
....++.++|+++++.+ ...++.++|+.|...++.+++.++..+|..+| .++..+.+-||+........+
T Consensus 530 q~i~elq~~l~eltGmd-~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R-~~vlip~saHgtnPasa~~~G-------- 599 (939)
T TIGR00461 530 ELIAQLEKWLCSITGFD-AISLQPNSGAQGEYAGLRVIRSYHESRGENHR-NICLIPVSAHGTNPASAAMAG-------- 599 (939)
T ss_pred HHHHHHHHHHHHHHCCC-CcccCCchHHHHHHHHHHHHHHHHHhcCCCCC-CEEEEEccccCcCHHHHHHCC--------
Confidence 56678999999999544 34556678888888889899988888886444 455567788988655433332
Q ss_pred hccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcC
Q psy14484 157 TSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYN 236 (430)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g 236 (430)
.+++.++.+..... |+++|+++++++.+++++|++.. +++ .|.+.++ +++|.++|+++|
T Consensus 600 ----~~Vv~V~~d~~G~i------------Dle~L~~~i~~~~~~taaV~iT~-pst-~G~~e~~---I~eI~~iah~~G 658 (939)
T TIGR00461 600 ----MQVVPVNCDQDGNI------------DLVDLKNKAEQHGDELAAVMVTY-PST-HGVFEPT---IQHACDIVHSFG 658 (939)
T ss_pred ----CEEEEeccCCCCCc------------CHHHHHHHHhhcCCceEEEEEEe-CCc-Cceeccc---HHHHHHHHHHcC
Confidence 23445554433333 89999999986556889888876 666 4655544 999999999999
Q ss_pred CEEEEeccccC-CCCcccccccccCCCCCceeeee--cccC----CCccccEEEEEcHHHHHhhhcc---------CCcc
Q psy14484 237 IHLIADEIAVG-CGRTGKFFACEHAEIWPDFLCLS--KGIT----GGYLPLSLVMTTDKIYNSIYYK---------NNIN 300 (430)
Q Consensus 237 i~li~DEv~~g-~g~~g~~~~~~~~~~~~d~~~~s--K~l~----gG~~~ig~~~~~~~~~~~~~~~---------~~~~ 300 (430)
.++++|-++.. .... ...-....|+++++ |+|+ +|+-.+|.+.+++.+...+... ++..
T Consensus 659 ~~v~VDgAq~~al~~l-----~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq 733 (939)
T TIGR00461 659 GQVYLDGANMNAQVGL-----TSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSK 733 (939)
T ss_pred CEEEEEecChhhCCCC-----CCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCcc
Confidence 99999999852 2110 11113457999886 8766 2335689999998765443310 0010
Q ss_pred ccc-ccCCCCCCHHHHHHHHHHHHHHhhcCHHH---HHHHHHHHHHHHHHchhcCCCeeeEeecce-E--EEEEEeecCC
Q psy14484 301 IFL-HSHSYSGNPLACCAALATLEIFNKDNILQ---RISQDMKKITKALTSLITHPKIINFRQKGM-I--WAFDVIIEDP 373 (430)
Q Consensus 301 ~~~-~~~t~~~~~~~~~aa~~~l~~~~~~~~~~---~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~-~--~~~~~~~~~~ 373 (430)
.+. .++...++...+..++..+..+..+.+.+ ..-.++.|+.++|++. .+.+.. ...+. + +.+++. ..+
T Consensus 734 ~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~--~~~l~~-~~~~~~~hEfv~~~~-~~~ 809 (939)
T TIGR00461 734 SIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDH--YPILFV-GTLKHVAHECILDLR-PLK 809 (939)
T ss_pred ccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcc--Cccccc-CCCCceeEEEEEecc-chh
Confidence 001 11223445555566777778776665543 3455788888888752 222111 00111 1 222332 111
Q ss_pred ccchhHHHHHHHHHHHCCcEEee----cCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 374 EQIETFSKKFFVAALKNELLLRP----IGNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 374 ~~~~~~a~~~~~~l~~~Gv~~~~----~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
......+.++.++|.+.|+.... -.+.+.+.|.-..+++|||++++++.++..++
T Consensus 810 ~~~g~~~~dIakrL~d~G~hapt~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e~ 868 (939)
T TIGR00461 810 AKTGIEAIDVAKRLQDYGFHAPTLSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEEI 868 (939)
T ss_pred hhcCCCHHHHHHHHHhCCeeccccCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHHH
Confidence 11111257899999999987532 23578888898999999999999998876654
No 292
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.70 E-value=6.6e-15 Score=142.09 Aligned_cols=293 Identities=12% Similarity=0.090 Sum_probs=173.0
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCcc
Q psy14484 72 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 151 (430)
Q Consensus 72 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~ 151 (430)
.++.++...++++.++++. +.+.+++++||++|+..++..+.. +++.||+.++.|.+........
T Consensus 60 ~r~~~pt~~~Le~~lA~l~--g~~~~l~~~sgt~Ai~~~l~al~~--------~GD~Vl~~~~~y~~~~~~~~~~----- 124 (394)
T PRK07050 60 GLHATPTSLALAQRLAEIE--GGRHALLQPSGLAAISLVYFGLVK--------AGDDVLIPDNAYGPNRDHGEWL----- 124 (394)
T ss_pred CCCCCHHHHHHHHHHHHHh--CCCeEEEeccHHHHHHHHHHHHhC--------CCCEEEEecCCcccHHHHHHHH-----
Confidence 3677888899999999998 457899999999999999987754 6788999999997653211000
Q ss_pred chhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHH
Q psy14484 152 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 231 (430)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l 231 (430)
.......+.+++.. +.+++++.++ +++++|++|. ++|+.|.... +++|.++
T Consensus 125 ----~~~~Gi~v~~vd~~-----------------~~~~l~~~i~---~~tklV~le~-p~Np~~~~~d----i~~I~~i 175 (394)
T PRK07050 125 ----ARDFGITVRFYDPL-----------------IGAGIADLIQ---PNTRLIWLEA-PGSVTMEVPD----VPAITAA 175 (394)
T ss_pred ----HHhcCeEEEEECCC-----------------CHHHHHHhcC---CCCeEEEEEC-CCCCCccHhh----HHHHHHH
Confidence 01111222333221 3356777775 5688888888 8887765544 9999999
Q ss_pred HHhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCCc-cccEEEEE-cHHHHHhhhccCCcccccccCC
Q psy14484 232 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGY-LPLSLVMT-TDKIYNSIYYKNNINIFLHSHS 307 (430)
Q Consensus 232 ~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~-~~ig~~~~-~~~~~~~~~~~~~~~~~~~~~t 307 (430)
|+++|+++|+|++|+ .+.. ........|++ +++|.++||. .+.|++++ ++++.+.+.. ......
T Consensus 176 a~~~gi~livD~a~a-~~~~-----~~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~------~~~~~G 243 (394)
T PRK07050 176 ARARGVVTAIDNTYS-AGLA-----FKPFEHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKL------ARMRLG 243 (394)
T ss_pred HHHcCCEEEEECCcc-cccc-----cCHHHcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHH------HHHhcC
Confidence 999999999999986 2111 11112234655 5789998642 45777776 5677666543 111112
Q ss_pred CCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhc-----CCCee----------eEeecceEEEEEEeecC
Q psy14484 308 YSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-----HPKII----------NFRQKGMIWAFDVIIED 372 (430)
Q Consensus 308 ~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~-----~~~~~----------~~~~~g~~~~~~~~~~~ 372 (430)
.+.++..+..+...|+.+. ...++..+++.++.+.|++.+. +|.+. ...+.|.++.|++. .+
T Consensus 244 ~~~~~~~a~l~lr~l~tl~--~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~-~~ 320 (394)
T PRK07050 244 IGVSADDCSLVLRGLPSLQ--VRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFD-ER 320 (394)
T ss_pred CCCCHHHHHHHHcCCCcHH--HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEEC-CC
Confidence 2334544333322222111 1223333444455555543211 12211 12355778888886 43
Q ss_pred CccchhHHHHHHHHHHHCCcEEe---------ec-------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 373 PEQIETFSKKFFVAALKNELLLR---------PI-------------GNTVYLMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 373 ~~~~~~~a~~~~~~l~~~Gv~~~---------~~-------------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
.. ...+.+|.+.|...++.+. |. ++.+||++.+. +.+.+++.|+++|+..+
T Consensus 321 ~~--~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svGlE----~~~dl~~dl~~al~~~~ 393 (394)
T PRK07050 321 YS--PAQVDAFVEALELFAIGWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYIGLE----DEADLIADLEQALEAAL 393 (394)
T ss_pred CC--HHHHHHHHHcCCCCeeccccCCccceEeeCcccccchhhcCCCCCEEEEEeCcC----CHHHHHHHHHHHHHHhh
Confidence 21 1124677777765543211 21 25688876654 45666666666666554
No 293
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.70 E-value=3.2e-15 Score=143.19 Aligned_cols=289 Identities=12% Similarity=0.096 Sum_probs=175.0
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
+..++....|++.++++.+ .+.+++++||++|+..++..+.. +++.||+.++.|++........
T Consensus 46 r~gnPt~~~lE~~lA~l~g--~~~~~~~~sG~~Ai~~al~all~--------~GD~Vl~~~~~y~~t~~~~~~~------ 109 (377)
T TIGR01324 46 RRGTLTHFALQDAMCELEG--GAGCYLYPSGLAAVTNSILAFVK--------AGDHVLMVDSAYEPTRYFCDIV------ 109 (377)
T ss_pred CCCCccHHHHHHHHHHHhC--CCcEEEECcHHHHHHHHHHHhcC--------CCCEEEEcCCCcHHHHHHHHHH------
Confidence 4556778899999999984 46899999999999999987754 6788999999998753211100
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
.......+.++... +.+.++++++ +++++|++|. +.|++|...+ +++|.++|
T Consensus 110 ---~~~~gi~v~~~d~~-----------------~~e~l~~~i~---~~tklV~les-p~Np~g~~~d----l~~I~~la 161 (377)
T TIGR01324 110 ---LKRMGVDITYYDPL-----------------IGEDIATLIQ---PNTKVLFLEA-PSSITFEIQD----IPAIAKAA 161 (377)
T ss_pred ---HHhcCcEEEEECCC-----------------CHHHHHHhcC---CCceEEEEEC-CCCCCCcHHH----HHHHHHHH
Confidence 00111122222211 2267777775 5789999999 8898887776 99999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCceee--eecccCCC-ccccEEEEEcHHHHHhhhccCCcccccccCCCC
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGG-YLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYS 309 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~--~sK~l~gG-~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 309 (430)
+++|+++|+|++|+ .+.... .....+|+++ ++|.++|. ..-.|+++++++.++.+.. ........
T Consensus 162 ~~~g~~livD~t~a-~g~~~~-----pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~------~~~~~G~~ 229 (377)
T TIGR01324 162 RNPGIVIMIDNTWA-AGLLFK-----PLEHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLRE------HSYLMGQM 229 (377)
T ss_pred HHcCCEEEEECCCc-cccccC-----ccccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHH------HHHHhCCC
Confidence 99999999999997 332221 1233567775 57999872 2346778888877665543 11112223
Q ss_pred CCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchh-----cCCCee----------eEeecceEEEEEEeecCCc
Q psy14484 310 GNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKII----------NFRQKGMIWAFDVIIEDPE 374 (430)
Q Consensus 310 ~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~-----~~~~~~----------~~~~~g~~~~~~~~~~~~~ 374 (430)
.+|..+......++.+. -..++..+++..+.+.|++-+ .+|.+. ...+.|.++.|++. ...
T Consensus 230 l~p~~a~~~~rgl~tl~--~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~-~~~- 305 (377)
T TIGR01324 230 VDADDAYTTLRGLRTLG--VRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQ-RLT- 305 (377)
T ss_pred CCHHHHHHHHhhhhhHH--HHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEEC-CCC-
Confidence 34544444434444321 123444555555555554321 122211 12366889999987 421
Q ss_pred cchhHHHHHHHHHHHCCcEEe----------e--------------cCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 375 QIETFSKKFFVAALKNELLLR----------P--------------IGNTVYLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 375 ~~~~~a~~~~~~l~~~Gv~~~----------~--------------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
.+.+.+|.+.|.-.++.++ + .++.+||++.+. +.+.+++.|+++|+.
T Consensus 306 --~~~~~~~~~~l~~~~~~~slG~~~sl~~~~~~~~~~~~~~~~~~~~~liR~svGlE----~~~dl~~dl~~al~~ 376 (377)
T TIGR01324 306 --QKQVHAFLDHLQLFGLGYSWGGYESLALCNQPELGHRPNIKRNLEGPLIRVHIGLE----NVDDLKADLKAGFEA 376 (377)
T ss_pred --HHHHHHHHHhCCcceEeccCCCccceeecCCCCCCHHHHHhccCCCCEEEEEeCCC----CHHHHHHHHHHHHhc
Confidence 1114567777654332211 0 124688876654 455666666666653
No 294
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.70 E-value=3.3e-15 Score=144.15 Aligned_cols=291 Identities=14% Similarity=0.115 Sum_probs=178.5
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCcc
Q psy14484 72 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 151 (430)
Q Consensus 72 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~ 151 (430)
.++.++...+|++.++++.+ .+.+++++||+.|+..++..+.. +++.|++..+.|.+........
T Consensus 54 ~r~~~p~~~~le~~lA~l~g--~~~av~~~sG~~Ai~~~l~al~~--------~Gd~Vi~~~~~y~~t~~~~~~~----- 118 (391)
T TIGR01328 54 SRLGNPTVSNLEGRIAFLEG--TEAAVATSSGMGAIAATLLTILK--------AGDHLISDECLYGCTFALLEHA----- 118 (391)
T ss_pred eCCCCchHHHHHHHHHHHhC--CCcEEEECCHHHHHHHHHHHHhC--------CCCEEEEecCcchHHHHHHHHH-----
Confidence 35677888999999999994 45688999999999998877654 5677888887775442221110
Q ss_pred chhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHH
Q psy14484 152 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 231 (430)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l 231 (430)
.........+++.. |++++++.++ +++++|++|. ++|++|.+.+ +++|.++
T Consensus 119 ----~~~~G~~~~~vd~~-----------------d~e~l~~~i~---~~tklV~le~-p~Np~G~v~d----l~~I~~l 169 (391)
T TIGR01328 119 ----LTKFGIQVDFINMA-----------------IPEEVKAHIK---DNTKIVYFET-PANPTMKLID----MERVCRD 169 (391)
T ss_pred ----HhcCCeEEEEECCC-----------------CHHHHHHhhc---cCCeEEEEEC-CCCCCCcccC----HHHHHHH
Confidence 11112223344332 6788888885 5688999998 8899997776 9999999
Q ss_pred HHhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCCccc-cEEEEEcHHHHHhhhccCCcccccccCCC
Q psy14484 232 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLP-LSLVMTTDKIYNSIYYKNNINIFLHSHSY 308 (430)
Q Consensus 232 ~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~~~-ig~~~~~~~~~~~~~~~~~~~~~~~~~t~ 308 (430)
|+++|+++|+||++. .+..+.. .+...|++ +++|.+++...+ .|++++++++++.+.... .. ...+.
T Consensus 170 a~~~gi~livD~a~a-~~~~~~~-----~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~--~~--~~~g~ 239 (391)
T TIGR01328 170 AHSQGVKVIVDNTFA-TPMLTNP-----VALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVG--IK--DMTGS 239 (391)
T ss_pred HHHcCCEEEEECCCc-hhccCCc-----hhcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHH--HH--hCCCC
Confidence 999999999999986 2222211 12345665 567999872245 467778888877665300 00 11112
Q ss_pred CCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhc-----CCCee----------eEeecceEEEEEEeecCC
Q psy14484 309 SGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-----HPKII----------NFRQKGMIWAFDVIIEDP 373 (430)
Q Consensus 309 ~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~-----~~~~~----------~~~~~g~~~~~~~~~~~~ 373 (430)
..++..++.+...|+.+ +...++..++++++.+.|+..+. +|... ..++-|.++.|+++ .+
T Consensus 240 ~l~~~~a~l~l~~L~tl--~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~-~~- 315 (391)
T TIGR01328 240 VISPFDAWLILRGLKTL--NIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELK-GG- 315 (391)
T ss_pred CCCcHHHHHHHhCcCcH--HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeC-CC-
Confidence 23444444444444322 22355566677777777765321 22211 12456889999987 42
Q ss_pred ccchhHHHHHHHHHHH--CCc--------EEee------------------cCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 374 EQIETFSKKFFVAALK--NEL--------LLRP------------------IGNTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 374 ~~~~~~a~~~~~~l~~--~Gv--------~~~~------------------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
.+.+.+|.+.|.- .+. +..| ..+.+|+++.+ |+.+.+++.|+++|
T Consensus 316 ---~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al 388 (391)
T TIGR01328 316 ---FAGAKKLLNNLKLIRLAVSLGDAETLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGL----EDADDLIADLKQAL 388 (391)
T ss_pred ---HHHHHHHHHhCCcceEecCCCCCcccCcCCCccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHH
Confidence 1113456665431 111 1101 02578997664 45677777777777
Q ss_pred HH
Q psy14484 426 NE 427 (430)
Q Consensus 426 ~~ 427 (430)
+.
T Consensus 389 ~~ 390 (391)
T TIGR01328 389 DA 390 (391)
T ss_pred hh
Confidence 64
No 295
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.70 E-value=7.1e-15 Score=140.91 Aligned_cols=252 Identities=14% Similarity=0.110 Sum_probs=153.9
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCcc
Q psy14484 72 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 151 (430)
Q Consensus 72 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~ 151 (430)
.++.++....|++.|+++. +.+.+++++||++|+..++..+.. ++++|++.++.|.+........
T Consensus 48 ~R~~npt~~~Le~~lA~le--g~e~ivvt~gg~~Ai~~~l~all~--------~Gd~Il~~~~~y~~~~~~~~~~----- 112 (388)
T PRK08861 48 TRSGNPNRGLLEQTLSELE--SGKGAVVTNCGTSALNLWVSALLG--------PDDLIVAPHDCYGGTYRLFNTR----- 112 (388)
T ss_pred cCCCCchHHHHHHHHHHHh--CCCeEEEECCHHHHHHHHHHHHcC--------CCCEEEEcCCchHHHHHHHHHH-----
Confidence 4677788899999999998 468999999999999999987754 6678998888886532211110
Q ss_pred chhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHH
Q psy14484 152 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 231 (430)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l 231 (430)
.........+++.+ |+++++++++ +++++|+++. ++|++|.+.+ +++|.++
T Consensus 113 ----~~~~gi~v~~vd~~-----------------d~e~l~~~i~---~~tklV~les-P~NPtG~v~d----l~~I~~l 163 (388)
T PRK08861 113 ----ANKGDFKVQFVDQS-----------------DAAALDAALA---KKPKLILLET-PSNPLVRVVD----IAELCQK 163 (388)
T ss_pred ----HhcCCeEEEEECCC-----------------CHHHHHHhcC---cCCeEEEEEC-CCCCCCcccC----HHHHHHH
Confidence 00001122233221 7788888885 4688999998 9999998877 8999999
Q ss_pred HHhcCCEEEEeccccC-CCCcccccccccCCCCCceee--eecccCCC-ccccEEEEEc-HHHHHhhhccCCcccccccC
Q psy14484 232 CNNYNIHLIADEIAVG-CGRTGKFFACEHAEIWPDFLC--LSKGITGG-YLPLSLVMTT-DKIYNSIYYKNNINIFLHSH 306 (430)
Q Consensus 232 ~~~~gi~li~DEv~~g-~g~~g~~~~~~~~~~~~d~~~--~sK~l~gG-~~~ig~~~~~-~~~~~~~~~~~~~~~~~~~~ 306 (430)
|+++|+++|+||+|.. +.. .......|+++ ++|.++|. -...|+++++ +++.+.+.. .....
T Consensus 164 a~~~gi~vIvDea~~~~~~~-------~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~------~~~~~ 230 (388)
T PRK08861 164 AKAVGALVAVDNTFLTPVLQ-------KPLELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAW------WGNCI 230 (388)
T ss_pred HHHcCCEEEEECCccccccC-------CCcccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHH------HHhcc
Confidence 9999999999999862 211 11223467775 55999873 2345667674 456554443 11111
Q ss_pred CCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchh-----cCCCee----------eEeecceEEEEEEeec
Q psy14484 307 SYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKII----------NFRQKGMIWAFDVIIE 371 (430)
Q Consensus 307 t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~-----~~~~~~----------~~~~~g~~~~~~~~~~ 371 (430)
....+|..+....-.|+.+. -..++-.+.+..+.+.|+..+ .+|+.. ...+-|.++.|++. .
T Consensus 231 G~~~~p~~a~l~~rgl~Tl~--lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~-~ 307 (388)
T PRK08861 231 GATGTPFDSYMTLRGIRTLG--ARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFA-G 307 (388)
T ss_pred CCCCChHHHHHHHhcCCCHH--HHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeC-C
Confidence 22334554443333332221 112333444555555554321 122211 23467889999987 4
Q ss_pred CCccchhHHHHHHHHH
Q psy14484 372 DPEQIETFSKKFFVAA 387 (430)
Q Consensus 372 ~~~~~~~~a~~~~~~l 387 (430)
+ .+.+.+|.+.|
T Consensus 308 ~----~~~~~~f~~~l 319 (388)
T PRK08861 308 S----FEQLKVFVKAL 319 (388)
T ss_pred C----HHHHHHHHhcC
Confidence 2 11134566654
No 296
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.69 E-value=2.9e-14 Score=140.06 Aligned_cols=322 Identities=11% Similarity=0.023 Sum_probs=187.5
Q ss_pred CCCHHHHHHHHHHH-hhccccc---cCCCCCHHHHHHHH----HHHhhcCCCCCeEEE---cCCchHHHHHHHHHHHHhh
Q psy14484 50 HSNSYINKALKNQL-NKLEHVM---LSNLTHKPVIKLSE----KLSSLTQYKLGHCFY---GSDGASAVEVALKMSFHYW 118 (430)
Q Consensus 50 ~~~p~v~~a~~~~~-~~~~~~~---~~~~~~~~~~~l~~----~l~~~~~~~~~~v~~---~~sgteA~~~al~~~~~~~ 118 (430)
+.+|.+++++...+ .++.... +....++..+++++ ...+.++...+.+.+ .+||+.||..++.++..
T Consensus 45 ~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~-- 122 (475)
T PLN03226 45 FTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQ-- 122 (475)
T ss_pred cCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhCC--
Confidence 35799999999888 5554321 11122334444432 355566544444433 47999999999998875
Q ss_pred hhcCCCCCcEEEEEcCCC-----CCcchhhhccCCCccchhhhhccCCCeeEeCCCCC--CCCCCCCChhHHHHHHHHHH
Q psy14484 119 YNKGFLNKKKFICLQNSY-----HGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS--RNINKGNSANEIARCAIFDL 191 (430)
Q Consensus 119 ~~~g~~~~~~vl~~~~~y-----hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~~~l 191 (430)
++++|+..+..- |++......++... .....++++++ ... -|+++|
T Consensus 123 ------pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~----------~~~~~~~y~~~~~~g~-----------iD~d~L 175 (475)
T PLN03226 123 ------PHDRIMGLDLPHGGHLSHGYQTDGKKISATS----------IYFESMPYRLDESTGL-----------IDYDKL 175 (475)
T ss_pred ------CCCEEEECCCCcCcchhhhhhhcccccccce----------EEEEeeeeeecCCCCC-----------cCHHHH
Confidence 678888755322 32221111111110 00011233221 111 188999
Q ss_pred HHHHHhCCCCeEEEEE-ccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCcee--e
Q psy14484 192 EILLKKNHNKIAAIII-EPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--C 268 (430)
Q Consensus 192 e~~l~~~~~~~~~vi~-ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~ 268 (430)
++.+.+. +++.+++ ++ + .|...+ +++|.++|+++|++|++|++|. +|..+........+ ..|++ +
T Consensus 176 e~~l~~~--~pklIv~~~S-~---~s~~~D----~a~i~~ia~~~ga~LlvD~AH~-~Gli~~~~~~~p~~-~~Div~~t 243 (475)
T PLN03226 176 EKKAMLF--RPKLIIAGAS-A---YPRDWD----YARMRKIADKVGALLMCDMAHI-SGLVAAQEAASPFE-YCDVVTTT 243 (475)
T ss_pred HHHHhhc--CCeEEEEecC-c---CCCccC----HHHHHHHHHHcCCEEEEEchhh-hCcccCCCCCCCCC-CCeEEEec
Confidence 9988753 3445555 54 3 343444 8899999999999999999997 44333211101111 36776 4
Q ss_pred eecccCCCccccEEEEEcHHHH-----------Hh---hhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcC---HH
Q psy14484 269 LSKGITGGYLPLSLVMTTDKIY-----------NS---IYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDN---IL 331 (430)
Q Consensus 269 ~sK~l~gG~~~ig~~~~~~~~~-----------~~---~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~---~~ 331 (430)
++|+|.|. +-|++++++++. +. +.. .+.. ..+-+.++..+++..++++++..++ +.
T Consensus 244 ~hK~L~GP--~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~---a~~~--~~~g~p~~~~iaal~aAl~~i~~~~~~~~~ 316 (475)
T PLN03226 244 THKSLRGP--RGGMIFFRKGPKPPKGQGEGAVYDYEDKINF---AVFP--GLQGGPHNHTIAALAVALKQAMTPEFKAYQ 316 (475)
T ss_pred CcccccCC--CceEEEEchhhcccccCCCccHHHHHHHhcc---ccCC--ccCCCchHHHHHHHHHHHHHHhCcCHHHHH
Confidence 66999763 337788877543 11 111 1111 1122234556666667788775443 57
Q ss_pred HHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec----------CCEE
Q psy14484 332 QRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI----------GNTV 401 (430)
Q Consensus 332 ~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~----------~~~l 401 (430)
+++.++.++|++.|++. ++..+..- ....+..+++. .... . ..++.+.|.+.||.+... +..+
T Consensus 317 ~~~~~na~~L~~~L~~~-G~~l~~~~-t~~hi~lv~~~-~~gi--~--~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~gi 389 (475)
T PLN03226 317 KQVKANAAALANRLMSK-GYKLVTGG-TDNHLVLWDLR-PLGL--T--GSRVEKVLDLAHITLNKNAVPGDSSALVPGGV 389 (475)
T ss_pred HHHHHHHHHHHHHHHhC-CCEEEcCC-CCCCEEEEEcc-CCCC--C--HHHHHHHHHHCCCEECCCCCCCCcccCCCCCc
Confidence 78889999999988764 33322211 11345556664 2211 1 246777888889988642 2457
Q ss_pred EE----eCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 402 YL----MPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 402 R~----~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
|+ -.+..++++|++++.+.|.+++.
T Consensus 390 RiGt~~lt~~g~~~~d~~~ia~~i~~~~~ 418 (475)
T PLN03226 390 RIGTPAMTSRGLVEKDFEKVAEFLHRAVT 418 (475)
T ss_pred ccCcHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 77 45667899999999999999886
No 297
>PRK05968 hypothetical protein; Provisional
Probab=99.69 E-value=8.4e-15 Score=141.32 Aligned_cols=287 Identities=11% Similarity=0.013 Sum_probs=169.7
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
.+..+...++++.++++.+ .+..++++||+.|+..++..... ++++||+..+.|++.......
T Consensus 59 r~~~p~~~~le~~lA~l~g--~~~av~~~sG~~Ai~~al~al~~--------~Gd~Vl~~~~~y~~t~~~~~~------- 121 (389)
T PRK05968 59 RGDNPTVRAFEEMLAKLEG--AEDARGFASGMAAISSTVLSFVE--------PGDRIVAVRHVYPDAFRLFET------- 121 (389)
T ss_pred CCCChhHHHHHHHHHHHhC--CCcEEEECCHHHHHHHHHHHHhC--------CCCEEEEeCCCchHHHHHHHH-------
Confidence 4556778899999999985 34566778999999998876654 667899988888764211110
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
.......+..+++.. |++++++++. ++++|++|. +.+..+...+ +++|.++|
T Consensus 122 --~~~~~G~~v~~vd~~-----------------d~~~l~~~i~----~tklV~ie~-pt~~~~~~~d----l~~i~~la 173 (389)
T PRK05968 122 --ILKRMGVEVDYVDGR-----------------DEEAVAKALP----GAKLLYLES-PTSWVFELQD----VAALAALA 173 (389)
T ss_pred --HHHHcCceEEEeCCC-----------------CHHHHHHhcc----cCCEEEEEC-CCCCCCcHHH----HHHHHHHH
Confidence 011112233344322 6788888772 466787777 6666654544 99999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCC-CccccEEEEEcHHHHHhhhccCCcccccccCCCC
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITG-GYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYS 309 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~g-G~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 309 (430)
+++|+++|+|+++.... .... .. .+ .|++ +++|.++| |....|++++++++++.+... ..+ ..+ ..
T Consensus 174 ~~~gi~vivD~a~a~~~-~~~p--~~-~g--~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~--~~~-~~g--~~ 242 (389)
T PRK05968 174 KRHGVVTMIDNSWASPV-FQRP--IT-LG--VDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAE--AYP-YLG--AK 242 (389)
T ss_pred HHcCCEEEEECCCcchh-ccCc--hh-cC--CcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHH--HHH-hCC--CC
Confidence 99999999999986321 1111 11 23 4655 56799987 323467788888887766530 000 111 22
Q ss_pred CCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcCCCeee----------EeecceEEEEEEeecCCccchhH
Q psy14484 310 GNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIIN----------FRQKGMIWAFDVIIEDPEQIETF 379 (430)
Q Consensus 310 ~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~----------~~~~g~~~~~~~~~~~~~~~~~~ 379 (430)
.++..+..+...|+.+ ....++-.++++++.+.|++.+....+.. ..+.|.++.|++. ++ . .
T Consensus 243 ~~~~~A~~~l~~L~tl--~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~-~~----~-~ 314 (389)
T PRK05968 243 LSPFEAWLLLRGLRTL--PLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFR-EG----I-D 314 (389)
T ss_pred CChHHHHHHHcccCcH--HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEEC-CH----H-H
Confidence 3455444444444433 22334445556677777765422211110 1245778888886 41 1 1
Q ss_pred HHHHHHHHHHCCcEEe---------e-------------------cCCEEEEeCCCCCCHHHHHHHHHHHHH
Q psy14484 380 SKKFFVAALKNELLLR---------P-------------------IGNTVYLMPPYILNKNEIQHMTSAIFQ 423 (430)
Q Consensus 380 a~~~~~~l~~~Gv~~~---------~-------------------~~~~lR~~~~~~~t~e~i~~~~~~l~~ 423 (430)
+.+|++.|...++.++ | ..+.+|+++.+...++=++.+-++|++
T Consensus 315 ~~~f~~~L~~~~~~~s~G~~~slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE~~~dl~~dl~~al~~ 386 (389)
T PRK05968 315 VRAFADALKLFRLGVSWGGHESLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGLEGTEALWADLEQALAA 386 (389)
T ss_pred HHHHHHhCCccEEecCCCCCCceeeeCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHH
Confidence 4577787765442111 1 025789988876655545555444443
No 298
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.69 E-value=3.6e-14 Score=148.70 Aligned_cols=354 Identities=14% Similarity=0.118 Sum_probs=200.8
Q ss_pred CCCEEEecccccccccCCCCCH-HHHHHHHHHHhhccccccC-----CCCCHHHHHHHHHHHhhcCCCCC--eEEEcCCc
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNS-YINKALKNQLNKLEHVMLS-----NLTHKPVIKLSEKLSSLTQYKLG--HCFYGSDG 103 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p-~v~~a~~~~~~~~~~~~~~-----~~~~~~~~~l~~~l~~~~~~~~~--~v~~~~sg 103 (430)
++..|+|..+.. .-+| .|.+++.+.+......... ....+..++.++.++++++++++ .|+||+|+
T Consensus 33 ~~~iYLD~Aatt------~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsna 106 (805)
T PLN02724 33 KGVVYLDHAGAT------LYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGA 106 (805)
T ss_pred CCCEeEeCCCCC------CCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCCh
Confidence 346899976541 2234 4445555554432111111 11235677888999999987665 58999999
Q ss_pred hHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHH
Q psy14484 104 ASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEI 183 (430)
Q Consensus 104 teA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (430)
|+|+..+..... +. +++.||+ ....|.+........ ......+..++.+......... ...+
T Consensus 107 T~alnlva~~l~-~~------~gd~Iv~-t~~eH~svl~~~~~a---------~~~G~~v~~v~~~~~~~~~~~~-~g~~ 168 (805)
T PLN02724 107 TAALKLVGETFP-WS------SESHFCY-TLENHNSVLGIREYA---------LEKGAAAIAVDIEEAANQPTNS-QGSV 168 (805)
T ss_pred HHHHHHHHHHCC-CC------CCCeEEE-eeccccchHHHHHHH---------HHcCCeEEeccchhcccccccc-cccc
Confidence 999998866542 11 4456665 455565433221110 0112233344333100000000 0000
Q ss_pred HHHHHHHHHHHHH----hC---CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhc--------CCEEEEeccccCC
Q psy14484 184 ARCAIFDLEILLK----KN---HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNY--------NIHLIADEIAVGC 248 (430)
Q Consensus 184 ~~~d~~~le~~l~----~~---~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~--------gi~li~DEv~~g~ 248 (430)
..+.++|++.++ .. ++++.+|.+.. +.|.+|.+.| ++.+..+++.. ++++++|.+|+ +
T Consensus 169 -~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~-vsN~tG~i~p----i~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~-~ 241 (805)
T PLN02724 169 -VVKSRGLQRRNTSKLQKREDDGEAYNLFAFPS-ECNFSGAKFP----LDLVKLIKDNQHSNFSKSGRWMVLLDAAKG-C 241 (805)
T ss_pred -ccchhhhhhhhhhhhccccccCCCcceEEEEc-cccCCCCcCC----HHHHHHHHHhcccccccCcceEEEeehhhh-c
Confidence 001144555432 11 24567999999 9999998988 76665444432 36899999997 5
Q ss_pred CCcccccccccCCCCCceeeee--cccCCCccccEEEEEcHHHHHhhhcc---CCcc-----------------cccccC
Q psy14484 249 GRTGKFFACEHAEIWPDFLCLS--KGITGGYLPLSLVMTTDKIYNSIYYK---NNIN-----------------IFLHSH 306 (430)
Q Consensus 249 g~~g~~~~~~~~~~~~d~~~~s--K~l~gG~~~ig~~~~~~~~~~~~~~~---~~~~-----------------~~~~~~ 306 (430)
+.. .++...+.+|++++| |.+++- ..+|++++++++.+.+.+. +... .....+
T Consensus 242 g~~----piDv~~~~~Dfl~~S~HK~~GgP-~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~G 316 (805)
T PLN02724 242 GTS----PPDLSRYPADFVVVSFYKIFGYP-TGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDG 316 (805)
T ss_pred CCC----CCChhhcCCCEEEEecceeccCC-CCceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCC
Confidence 432 233334568999888 766642 4589999999887665431 1000 000111
Q ss_pred CCCCCHHHHHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHHHchhc---CCCeeeE---------eecceEEEEEEeec
Q psy14484 307 SYSGNPLACCAALATLEIFNK---DNILQRISQDMKKITKALTSLIT---HPKIINF---------RQKGMIWAFDVIIE 371 (430)
Q Consensus 307 t~~~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~l~~---~~~~~~~---------~~~g~~~~~~~~~~ 371 (430)
+.|.++.++..++++.++. +...++.+++.+++.+.|+++.. .+.+.-. ..++.++.|.+. .
T Consensus 317 --T~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~-~ 393 (805)
T PLN02724 317 --TISFLSIAALRHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLK-R 393 (805)
T ss_pred --CcchhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEE-c
Confidence 2345555556666766544 56678889999999999987731 1122111 235667777776 3
Q ss_pred CCccchhHHHHHHHHHHHCCcEEeec----------------------------------------CCEEEEeCCCCCCH
Q psy14484 372 DPEQIETFSKKFFVAALKNELLLRPI----------------------------------------GNTVYLMPPYILNK 411 (430)
Q Consensus 372 ~~~~~~~~a~~~~~~l~~~Gv~~~~~----------------------------------------~~~lR~~~~~~~t~ 411 (430)
.....-. ...+...+.++||.++.+ .+.+|+|+++++|.
T Consensus 394 ~~~~~v~-~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~ 472 (805)
T PLN02724 394 ADGSWVG-HREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTF 472 (805)
T ss_pred CCCCEeC-HHHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCH
Confidence 2111110 122333334556666421 16799999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy14484 412 NEIQHMTSAIFQTF 425 (430)
Q Consensus 412 e~i~~~~~~l~~~l 425 (430)
+||+.+++.|++.+
T Consensus 473 eDvd~lv~~l~~~~ 486 (805)
T PLN02724 473 EDCQKFIDFIISSF 486 (805)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999876
No 299
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.69 E-value=5.9e-15 Score=140.79 Aligned_cols=234 Identities=16% Similarity=0.218 Sum_probs=150.0
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCcc
Q psy14484 72 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 151 (430)
Q Consensus 72 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~ 151 (430)
.++..+...+|+++++++. +.++++.++||++|+.+++.+ .. ++++||+..+.|.+..........
T Consensus 49 ~R~~~p~~~~le~~lA~le--g~~~~v~~~sG~aAi~~~l~~-l~--------~GD~VI~~~~~yg~~~~~~~~~~~--- 114 (364)
T PRK07269 49 TRTKNPTRAKLEETLAAIE--SADYALATSSGMSAIVLAFSV-FP--------VGSKVVAVRDLYGGSFRWFNQQEK--- 114 (364)
T ss_pred eCCCCccHHHHHHHHHHHh--CCCeEEEeCCHHHHHHHHHHH-hC--------CCCEEEEecCCcCchHHHHHHHHh---
Confidence 3567788889999999998 667999999999999999853 33 567888888888654321111000
Q ss_pred chhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHH
Q psy14484 152 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 231 (430)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l 231 (430)
. .+. .+.+.. |+++++++++ +++++|++|. ++|++|.... +++|.++
T Consensus 115 ------~--~~~-~~~~~~----------------d~~~l~~~i~---~~TklV~les-P~NPtg~~~d----i~~I~~l 161 (364)
T PRK07269 115 ------E--GRF-HFTYAN----------------TEEELIAAIE---EDTDIVYIET-PTNPLMVEFD----IEKVAKL 161 (364)
T ss_pred ------c--CcE-EEEecC----------------CHHHHHHhcC---cCceEEEEEC-CCCCCCeeeC----HHHHHHH
Confidence 0 011 111111 6788988885 5688999998 8898887776 9999999
Q ss_pred HHhcCCEEEEeccccCCCCcccccccccCCCCCceeee--ecccCCCc-cccEEEEEc-HHHHHhhhccCCcccccccCC
Q psy14484 232 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCL--SKGITGGY-LPLSLVMTT-DKIYNSIYYKNNINIFLHSHS 307 (430)
Q Consensus 232 ~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~--sK~l~gG~-~~ig~~~~~-~~~~~~~~~~~~~~~~~~~~t 307 (430)
|+++|+++|+||++..- .. ....+...|++++ +|.++|.. .-.|+++++ +++.+.+.. ......
T Consensus 162 a~~~gi~vvvD~t~~~~-~~-----~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~------~~~~~G 229 (364)
T PRK07269 162 AHAKGAKVIVDNTFYSP-IY-----QRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFY------NLNTTG 229 (364)
T ss_pred HHHcCCEEEEECCCccc-cc-----CCchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHH------HHHHhC
Confidence 99999999999996411 11 1223445777765 48898721 124566664 566665543 111112
Q ss_pred CCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcCCCee--eEeecceEEEEEEe
Q psy14484 308 YSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKII--NFRQKGMIWAFDVI 369 (430)
Q Consensus 308 ~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~--~~~~~g~~~~~~~~ 369 (430)
...++..+..+...|+.+ +...++.++++.++.+.|+. +|.+. ..++.|.++.|++.
T Consensus 230 ~~~s~~~a~l~~~~L~tL--~~r~~~~~~na~~~a~~L~~---~p~v~~v~ypg~gg~~sf~~~ 288 (364)
T PRK07269 230 AVLSPFDSYLLMRGLKTL--SLRMERSTANAQEVVAFLKK---SPAVKEVLYTGKGGMISFKVA 288 (364)
T ss_pred CCCCHHHHHHHHcCCCcH--HHHHHHHHHHHHHHHHHHHh---CCCccEEeCCCcCcEEEEEEC
Confidence 334666555555555433 22345556666666666654 34332 23678899999886
No 300
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.69 E-value=9.6e-15 Score=141.49 Aligned_cols=241 Identities=13% Similarity=0.116 Sum_probs=152.4
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
.+..+...++++.++++.+. +..++++||+.|+..+++.... +++.||+..+.|.+.......
T Consensus 61 r~~~p~~~~le~~lA~l~g~--~~~i~~~sG~~Al~~~l~~ll~--------~Gd~Viv~~~~y~~t~~~~~~------- 123 (403)
T PRK07503 61 RISNPTLALLEQRMASLEGG--EAAVALASGMGAITATLWTLLR--------PGDEVIVDQTLYGCTFAFLHH------- 123 (403)
T ss_pred CCCCchHHHHHHHHHHHhCC--CcEEEEcCHHHHHHHHHHHHcC--------CCCEEEEccCccchHHHHHHH-------
Confidence 56677889999999999853 4567888999999999886643 567888888777432211110
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
........+.+++.. |+++++++++ +++++|+++. ++|++|...+ +++|.++|
T Consensus 124 --~~~~~G~~v~~vd~~-----------------d~~~l~~~i~---~~tklV~le~-p~NPtG~~~d----i~~I~~la 176 (403)
T PRK07503 124 --GLGEFGVTVRHVDLT-----------------DPAALKAAIS---DKTRMVYFET-PANPNMRLVD----IAAVAEIA 176 (403)
T ss_pred --HHhhCCEEEEEeCCC-----------------CHHHHHHhcC---ccCcEEEEeC-CCCCCCeeeC----HHHHHHHH
Confidence 011112223344332 6788888885 4688899998 8999997777 99999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCC-CccccEEEEEcHHHHHhhhccCCcccccccCCCC
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITG-GYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYS 309 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~g-G~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 309 (430)
+++|+++|+|++|+.. ..+.. .+...|++ +++|.++| |....|+++.++++.+.+... .........
T Consensus 177 ~~~gi~lIvD~a~a~~-~~~~~-----l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~----~~~~~~g~~ 246 (403)
T PRK07503 177 HGAGAKVVVDNTYCTP-YLQRP-----LELGADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLE----GLKDMTGAV 246 (403)
T ss_pred HHcCCEEEEECCCccc-ccCCc-----hhhCCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhh----hHHhCcCCC
Confidence 9999999999998732 22221 12345665 57799987 435678888888887766530 001112244
Q ss_pred CCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhc-----CCCee----------eEeecceEEEEEEe
Q psy14484 310 GNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-----HPKII----------NFRQKGMIWAFDVI 369 (430)
Q Consensus 310 ~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~-----~~~~~----------~~~~~g~~~~~~~~ 369 (430)
.+++.++.+...|+.+. ...++..++..++.+.|++.+. +|... ...+.|.++.+++.
T Consensus 247 ~s~~~a~l~l~~L~tl~--~r~~~~~~na~~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~ 319 (403)
T PRK07503 247 MSPFDAFLLMRGLKTLA--LRMDRHCASAQAVAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELK 319 (403)
T ss_pred CCHHHHHHHHcCcchHH--HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEEC
Confidence 46665555555554332 2233444566666666654311 22211 12346788888886
No 301
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.68 E-value=9.5e-15 Score=140.91 Aligned_cols=252 Identities=13% Similarity=0.120 Sum_probs=155.2
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
.+..+...++++.+++..+ .+..+.++||++|+..++..+.. ++++||+.++.|.+.........
T Consensus 57 r~~~p~~~~Le~~lA~~~g--~~~~i~~~sG~~Ai~~~l~all~--------~Gd~Vl~~~~~y~~t~~~~~~~~----- 121 (388)
T PRK07811 57 RTGNPTRTALEEQLAALEG--GAYGRAFSSGMAATDCLLRAVLR--------PGDHIVIPNDAYGGTFRLIDKVF----- 121 (388)
T ss_pred CCCCccHHHHHHHHHHHhC--CCceEEeCCHHHHHHHHHHHHhC--------CCCEEEEcCCCchHHHHHHHHhC-----
Confidence 4566778899999999985 34556668899999999988764 66789999999875422111110
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
........+++.. |++++++.++ +++++|++|. ++|++|...+ +++|.++|
T Consensus 122 ----~~~gi~~~~~d~~-----------------d~e~l~~~i~---~~tklV~ie~-p~NPtg~~~d----l~~I~~la 172 (388)
T PRK07811 122 ----TRWGVEYTPVDLS-----------------DLDAVRAAIT---PRTKLIWVET-PTNPLLSITD----IAALAELA 172 (388)
T ss_pred ----cCCCeEEEEeCCC-----------------CHHHHHHhcC---cCCeEEEEEC-CCCCcceecC----HHHHHHHH
Confidence 0111122333322 7888998885 4688999988 8888887766 99999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCC-CccccEEEEEc-HHHHHhhhccCCcccccccCCC
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITG-GYLPLSLVMTT-DKIYNSIYYKNNINIFLHSHSY 308 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~g-G~~~ig~~~~~-~~~~~~~~~~~~~~~~~~~~t~ 308 (430)
+++|+++|+||+++.. ..... .....|++ +++|.++| |....|+++++ +++.+.+.. .......
T Consensus 173 ~~~gi~lIvD~a~a~~-~~~~p-----~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~------~~~~~g~ 240 (388)
T PRK07811 173 HDAGAKVVVDNTFASP-YLQQP-----LALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAF------LQNGAGA 240 (388)
T ss_pred HHcCCEEEEECCCCcc-ccCCc-----hhhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHH------HHHhcCC
Confidence 9999999999998632 22211 12335666 56799987 32346777775 555554443 1111122
Q ss_pred CCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhc-----CCCee----------eEeecceEEEEEEeecCC
Q psy14484 309 SGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-----HPKII----------NFRQKGMIWAFDVIIEDP 373 (430)
Q Consensus 309 ~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~-----~~~~~----------~~~~~g~~~~~~~~~~~~ 373 (430)
..++..+..+...|+.+ +...++..++...+.+.|++.+. +|... ...+-|.++.|+++ .+
T Consensus 241 ~~s~~~a~l~~~~L~tl--~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~-~~- 316 (388)
T PRK07811 241 VPGPFDAYLTLRGLKTL--AVRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLA-GG- 316 (388)
T ss_pred CCCHHHHHHHHhccCcH--HHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeC-CC-
Confidence 23454443333334322 23345556677777777764321 22211 12466889999997 43
Q ss_pred ccchhHHHHHHHHH
Q psy14484 374 EQIETFSKKFFVAA 387 (430)
Q Consensus 374 ~~~~~~a~~~~~~l 387 (430)
.+.+.+|.+.|
T Consensus 317 ---~~~~~~f~~~l 327 (388)
T PRK07811 317 ---EEAARDFCART 327 (388)
T ss_pred ---HHHHHHHHHhC
Confidence 11134566654
No 302
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.68 E-value=5e-15 Score=141.53 Aligned_cols=316 Identities=11% Similarity=0.065 Sum_probs=187.7
Q ss_pred CHHHHHHHHHHHh-hccccccCCCCCHHHHHHHHHHHhhcCCCC-CeEEEc-CCchHHHHHHHHHHHHhhhhcCCCCCcE
Q psy14484 52 NSYINKALKNQLN-KLEHVMLSNLTHKPVIKLSEKLSSLTQYKL-GHCFYG-SDGASAVEVALKMSFHYWYNKGFLNKKK 128 (430)
Q Consensus 52 ~p~v~~a~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~v~~~-~sgteA~~~al~~~~~~~~~~g~~~~~~ 128 (430)
+|+|.+++.+... .+...++.....+..++.++.++++++... .+|+|+ +|||.+++.++..... ++
T Consensus 15 ~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~--------~~-- 84 (361)
T TIGR01366 15 RLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIE--------KK-- 84 (361)
T ss_pred CHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhccc--------cc--
Confidence 6788888764311 111112222234667788899999997533 368875 6799999999986642 22
Q ss_pred EEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEc
Q psy14484 129 FICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIE 208 (430)
Q Consensus 129 vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~e 208 (430)
++....+.++......+... ++..+...++.+... .++..+ .+++++|.+.
T Consensus 85 ~l~i~~G~~~~~~~~~a~~~---------~~~~~~~~~~~~~~~-----------------~~~~~~---~~~~~lV~~~ 135 (361)
T TIGR01366 85 SLHLSFGEFSSKFAKAVKLA---------PWLGEPIIVTADPGS-----------------APEPQA---DPGVDVIAWA 135 (361)
T ss_pred ccEEecCHHHHHHHHHHHhh---------hccCCceEEecCCCC-----------------CCCCcc---CCCCCEEEEc
Confidence 33333455554332222111 111122333333210 111112 3578889999
Q ss_pred cccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeee--cccCCCccccEEEEEc
Q psy14484 209 PLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITGGYLPLSLVMTT 286 (430)
Q Consensus 209 p~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s--K~l~gG~~~ig~~~~~ 286 (430)
. ..+.+|...| +++| ++++|+++++|.+++ ++-. ...++ . .|++++| |.+++- -.++.++++
T Consensus 136 h-~et~tG~~~p----i~~I---~~~~g~~~iVDavqs-~g~~--~idv~--~--~D~~~~s~~K~lg~~-~Gl~~~~~s 199 (361)
T TIGR01366 136 H-NETSTGVAVP----VRRP---EGSDDALVVIDATSG-AGGL--PVDIA--E--TDVYYFAPQKNFASD-GGLWLAIMS 199 (361)
T ss_pred c-cCCccceecc----cccc---cccCCCeEEEEcCcc-ccCC--CCCHH--H--CCEEEEEchhhcCCC-CceEEEEEC
Confidence 9 8899998888 6666 589999999999998 5322 22222 1 5888887 888762 136667788
Q ss_pred HHHHHhhhcc---CCcc-cc----------cccCCCCC-CHHHHHHHHHHHHHHhhc----CHHHHHHHHHHHHHHHHHc
Q psy14484 287 DKIYNSIYYK---NNIN-IF----------LHSHSYSG-NPLACCAALATLEIFNKD----NILQRISQDMKKITKALTS 347 (430)
Q Consensus 287 ~~~~~~~~~~---~~~~-~~----------~~~~t~~~-~~~~~~aa~~~l~~~~~~----~~~~~~~~~~~~l~~~l~~ 347 (430)
+++.+.+... +... .+ ....|.+. +...+.+..++++.+... ...++.+++.+++++.+++
T Consensus 200 ~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~ 279 (361)
T TIGR01366 200 PAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQE 279 (361)
T ss_pred HHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHh
Confidence 8877665421 0000 00 00233333 334444666777776543 2346677788888888877
Q ss_pred hhcCC-CeeeEe-ecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-----CCEEEEeCCCCCCHHHHHHHHHH
Q psy14484 348 LITHP-KIINFR-QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----GNTVYLMPPYILNKNEIQHMTSA 420 (430)
Q Consensus 348 l~~~~-~~~~~~-~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-----~~~lR~~~~~~~t~e~i~~~~~~ 420 (430)
+.... ...... .......+.+. ++.. ...+.+.|.++||.+.+. ++.+|+++...+|++||++++++
T Consensus 280 ~~~~~~~~~~~~~~s~~v~~v~~~-~g~~-----~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~a 353 (361)
T TIGR01366 280 RPYATPFVTDPGKRSQVVGTIDFV-DDID-----AATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTEC 353 (361)
T ss_pred CCCcccCCCChhhcccceEEEECC-CccC-----HHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHH
Confidence 63221 111110 11122333334 3211 356888888999998764 35799999999999999999999
Q ss_pred HHHHHHHh
Q psy14484 421 IFQTFNEV 428 (430)
Q Consensus 421 l~~~l~~~ 428 (430)
|++++.++
T Consensus 354 l~~~~~~~ 361 (361)
T TIGR01366 354 VDWVVERL 361 (361)
T ss_pred HHHHHhhC
Confidence 99988763
No 303
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.68 E-value=9.5e-14 Score=133.86 Aligned_cols=310 Identities=14% Similarity=0.074 Sum_probs=181.7
Q ss_pred HHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEE
Q psy14484 53 SYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICL 132 (430)
Q Consensus 53 p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~ 132 (430)
++-.+++.+.+..... ....+..+++++.+++.+ +.+++++++||++|+..++.++.. .+++.|++.
T Consensus 11 ~~~~~~~~~~l~~~~~----~g~~~~~~~~e~~la~~~--g~~~~v~~~sgt~al~~~l~~~~~-------~~Gd~Viv~ 77 (375)
T PRK11706 11 GTELDYIQQAMSSGKL----CGDGGFTRRCQQWLEQRF--GSAKVLLTPSCTAALEMAALLLDI-------QPGDEVIMP 77 (375)
T ss_pred HHHHHHHHHHHHcCCc----cCCCHHHHHHHHHHHHHh--CCCeEEEECCHHHHHHHHHHHhCC-------CCCCEEEEC
Confidence 3446677776654321 223466788888899888 567999999999999988776521 156889998
Q ss_pred cCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccc
Q psy14484 133 QNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQ 212 (430)
Q Consensus 133 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~ 212 (430)
.++|..........+ ...++++.+.+... .|++++++.++ +++++|++ ++
T Consensus 78 ~~t~~~~~~~~~~~G-------------~~~v~~d~d~~~~~-----------~d~~~le~~i~---~~tk~i~~---~~ 127 (375)
T PRK11706 78 SYTFVSTANAFVLRG-------------AKIVFVDIRPDTMN-----------IDETLIEAAIT---PKTRAIVP---VH 127 (375)
T ss_pred CCCcHHHHHHHHHcC-------------CEEEEEecCCCcCC-----------cCHHHHHHhcC---CCCeEEEE---eC
Confidence 888876543332221 22234433321111 17899999885 35677664 32
Q ss_pred cCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCC--cccccccccCCCCCceeeee----cccCCCccccEEEEEc
Q psy14484 213 CAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGR--TGKFFACEHAEIWPDFLCLS----KGITGGYLPLSLVMTT 286 (430)
Q Consensus 213 ~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~--~g~~~~~~~~~~~~d~~~~s----K~l~gG~~~ig~~~~~ 286 (430)
.+|...+ +++|.++|+++|+++|.|++|+ ++. .|.. .+...|+.+|| |.++.| .+.+++..+
T Consensus 128 -~~G~~~~----~~~i~~la~~~~i~vIeD~a~a-~g~~~~~~~-----~g~~~~~~~~Sf~~~K~l~~g-~gG~~~~~~ 195 (375)
T PRK11706 128 -YAGVACE----MDTIMALAKKHNLFVVEDAAQG-VMSTYKGRA-----LGTIGHIGCFSFHETKNYTAG-EGGALLIND 195 (375)
T ss_pred -CCCCccC----HHHHHHHHHHcCCEEEEECccc-cccccCCee-----eecCcCEEEEeCCCCcccccc-CCeEEEECC
Confidence 3565555 8999999999999999999997 432 2211 12224778888 998765 344455556
Q ss_pred HHHHHhhhc---cCCccc------------ccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcC
Q psy14484 287 DKIYNSIYY---KNNINI------------FLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITH 351 (430)
Q Consensus 287 ~~~~~~~~~---~~~~~~------------~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~ 351 (430)
+++.+.+.. .+..+. ...+.++-.+.+.++.+.+.|+.+ +...++-+++.+++.+.|..+...
T Consensus 196 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l--~~~~~~R~~~~~~~~~~L~~~~~~ 273 (375)
T PRK11706 196 PALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQLEAA--DRINQRRLALWQRYYDALAPLAEA 273 (375)
T ss_pred HHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCCCcC
Confidence 777654332 110000 001122222334444444445443 345566666777777777665311
Q ss_pred CCee--eEe----ecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEee--------------------c-------C
Q psy14484 352 PKII--NFR----QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP--------------------I-------G 398 (430)
Q Consensus 352 ~~~~--~~~----~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~--------------------~-------~ 398 (430)
+.+. ..+ ....++.+.+. +. . . .+++.+.|.++||.+.. + .
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~-~~-~-~---r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~ 347 (375)
T PRK11706 274 GRIELPSIPDDCKHNAHMFYIKLR-DL-E-D---RSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESE 347 (375)
T ss_pred CeeecCCCCCCCceeeEEEEEEEC-Cc-C-C---HHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHh
Confidence 1111 111 11223333333 21 1 1 36899999999997531 0 1
Q ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 399 NTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 399 ~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
+.+.+-++...+++|++.+++.|++++
T Consensus 348 ~~l~lP~~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 348 RLLRLPLFYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred CcEeccCCCCCCHHHHHHHHHHHHHHh
Confidence 334454555579999999999998765
No 304
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.68 E-value=3.3e-14 Score=134.94 Aligned_cols=315 Identities=10% Similarity=0.026 Sum_probs=191.3
Q ss_pred CHHHHHHHHHHHhhcccccc-----CCCCC---HHHHHHHHHHHhhcCCC-CCeEEEcCC-chHHHHHHHHHHHHhhhhc
Q psy14484 52 NSYINKALKNQLNKLEHVML-----SNLTH---KPVIKLSEKLSSLTQYK-LGHCFYGSD-GASAVEVALKMSFHYWYNK 121 (430)
Q Consensus 52 ~p~v~~a~~~~~~~~~~~~~-----~~~~~---~~~~~l~~~l~~~~~~~-~~~v~~~~s-gteA~~~al~~~~~~~~~~ 121 (430)
+..|++++.+.+.+...... ..... +..+++++.|.++++.. ..+|+|++| ||+|+++++.....
T Consensus 4 p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~----- 78 (349)
T TIGR01364 4 PEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLA----- 78 (349)
T ss_pred CHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCC-----
Confidence 55788898888775431111 11112 56678888899998642 236777765 99999999987764
Q ss_pred CCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCC
Q psy14484 122 GFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNK 201 (430)
Q Consensus 122 g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~ 201 (430)
+.+++++...++.|+...-.+.. ... ...+..+...... .. .++++++ + ..+
T Consensus 79 ---~~~~~l~i~~G~fg~r~~~~a~~-----------~g~-~~~~~~~~~~~~~--~~------~~~~~~~--~---~~~ 130 (349)
T TIGR01364 79 ---EGKVADYIVTGAWSKKAAKEAKK-----------YGV-VNVVASGKEGNYT--KI------PDPSTWE--I---SED 130 (349)
T ss_pred ---CCCeEEEEECCHHHHHHHHHHHH-----------hCC-cEEEeccccCCCC--CC------CCHHhcC--C---CCC
Confidence 45667777777767643222211 111 1222211100000 00 1444444 2 236
Q ss_pred eEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeee--cccCCCccc
Q psy14484 202 IAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITGGYLP 279 (430)
Q Consensus 202 ~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s--K~l~gG~~~ 279 (430)
+.+|.+.. ..+++|...+ ++++.+++++++|.+++ +|.. ...++.+ |++++| |+++. ..
T Consensus 131 ~~~v~~th-~ETstGv~~~---------~l~~~~~~l~iVDavss-~g~~--~id~~~~----d~~~~ssqK~lgP--~G 191 (349)
T TIGR01364 131 AAYVHYCA-NETIHGVEFR---------ELPDVKNAPLVADMSSN-ILSR--PIDVSKF----GLIYAGAQKNIGP--AG 191 (349)
T ss_pred CCEEEEcC-CCCcccEecc---------eecccCCCeEEEEcccc-ccCc--cCCHHHc----cEEEEecccccCC--Cc
Confidence 77788877 7778887654 66777899999999987 4322 2223322 467666 88852 35
Q ss_pred cEEEEEcHHHHHhhhccCCccccc-------ccCC-CCCCHHHHHHHHHHHHHHhhc-C---HHHHHHHHHHHHHHHHHc
Q psy14484 280 LSLVMTTDKIYNSIYYKNNINIFL-------HSHS-YSGNPLACCAALATLEIFNKD-N---ILQRISQDMKKITKALTS 347 (430)
Q Consensus 280 ig~~~~~~~~~~~~~~~~~~~~~~-------~~~t-~~~~~~~~~aa~~~l~~~~~~-~---~~~~~~~~~~~l~~~l~~ 347 (430)
+|.+++++++.+.+.+. ...+. ...+ ++++.....+..++|+.+.++ + ..++.+++.+++++.|++
T Consensus 192 lg~l~~s~~~~~~~~~~--~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~ 269 (349)
T TIGR01364 192 LTVVIVRKDLLGRASRI--TPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDN 269 (349)
T ss_pred eEEEEECHHHHhhcccC--CCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999988765441 10110 1122 345556666777888877654 3 445667788888888877
Q ss_pred hhcCCCe-eeE-eecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec---CCEEEEeCCCCCCHHHHHHHHHHHH
Q psy14484 348 LITHPKI-INF-RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI---GNTVYLMPPYILNKNEIQHMTSAIF 422 (430)
Q Consensus 348 l~~~~~~-~~~-~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~---~~~lR~~~~~~~t~e~i~~~~~~l~ 422 (430)
+..+... ... .....++.|..+ +. .+..++.+.+.++|+.+.++ .+.+|+++..++|+|||+.++++|+
T Consensus 270 ~~gl~~~~~~~~~rs~~v~sf~~~-~~-----~~~~~~~~~~~~~Gi~~~~~~~~~g~vRvS~~~~nt~edid~l~~al~ 343 (349)
T TIGR01364 270 SNGFYRNPVDPRNRSRMNVVFTLG-NE-----ELEKRFLKEAEERGLVSLKGHRSVGGMRASIYNAMPLEGVQALVDFMK 343 (349)
T ss_pred CCCeeccCCCHHHcCCeEEEEecC-Ch-----hHhHHHHHHHHHCCCcccCCccccCeeEEECcCCCCHHHHHHHHHHHH
Confidence 6322111 110 112245666655 32 11256767888999965554 2689999999999999999999999
Q ss_pred HHHH
Q psy14484 423 QTFN 426 (430)
Q Consensus 423 ~~l~ 426 (430)
+++.
T Consensus 344 ~~~~ 347 (349)
T TIGR01364 344 EFQK 347 (349)
T ss_pred HHHH
Confidence 8764
No 305
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.67 E-value=3.2e-14 Score=136.25 Aligned_cols=252 Identities=12% Similarity=0.087 Sum_probs=151.5
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccch
Q psy14484 74 LTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFK 153 (430)
Q Consensus 74 ~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~ 153 (430)
...+....|++.++++.+ .+.+++++||++|+..++..+.. ++++||+.++.|.+........
T Consensus 58 ~~npt~~~Le~~iA~le~--~~~~~~~~sG~~Ai~~~l~all~--------~GD~Vvv~~~~Y~~t~~l~~~~------- 120 (394)
T PRK09028 58 RGTPTHFAFQAAIVELEG--GAGTALYPSGAAAISNALLSFLK--------AGDHLLMVDSCYEPTRDLCDKI------- 120 (394)
T ss_pred CCCchHHHHHHHHHHHhC--CCcEEEECCHHHHHHHHHHHHhC--------CCCEEEEECCCcHHHHHHHHHh-------
Confidence 334556788899998873 35789999999999999887654 6788999999986653221110
Q ss_pred hhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHH
Q psy14484 154 EIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICN 233 (430)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~ 233 (430)
......++.+++.. +.+.++++++ +++++|++|. ++|++|.+.+ +++|.++|+
T Consensus 121 --l~~~Gi~v~~v~~~-----------------~~e~l~~~l~---~~TklV~les-psNPtg~v~d----l~~I~~la~ 173 (394)
T PRK09028 121 --LKGFGIETTYYDPM-----------------IGEGIRELIR---PNTKVLFLES-PGSITMEVQD----VPTLSRIAH 173 (394)
T ss_pred --hhhcceEEEEECCC-----------------CHHHHHHhcC---cCceEEEEEC-CCCCCCcHHH----HHHHHHHHH
Confidence 01111222233211 4567887774 5789999999 9999987766 999999999
Q ss_pred hcCCEEEEeccccCCCCcccccccccCCCCCceee--eecccCCC-ccccEEEEEcHHHHHhhhccCCcccccccCCCCC
Q psy14484 234 NYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGG-YLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSG 310 (430)
Q Consensus 234 ~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~--~sK~l~gG-~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 310 (430)
++|+++++|++|+. +. .+....+.+|+++ ..|.++|. -.-.|+++.++++.+.+.. .........
T Consensus 174 ~~g~~lvvD~t~a~-p~-----~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~------~~~~~G~~~ 241 (394)
T PRK09028 174 EHDIVVMLDNTWAS-PI-----NSRPFEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLRE------HSYLMGQCT 241 (394)
T ss_pred HcCCEEEEECCccc-cc-----cCCccccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHH------HHHhcCCCC
Confidence 99999999999862 11 1222344568775 55999873 2345666666766555543 011111123
Q ss_pred CHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchh-----cCCCee----------eEeecceEEEEEEeecCCcc
Q psy14484 311 NPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKII----------NFRQKGMIWAFDVIIEDPEQ 375 (430)
Q Consensus 311 ~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~-----~~~~~~----------~~~~~g~~~~~~~~~~~~~~ 375 (430)
+|..+.-..-.|+.+. -..++..+++..+.+.|++.+ .+|++. ...+-|.++.|++. ++.
T Consensus 242 ~p~~a~l~~rgl~TL~--lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~-~~~-- 316 (394)
T PRK09028 242 SPDDVYLAMRGLRTLG--VRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLK-QGD-- 316 (394)
T ss_pred CHHHHHHHHcccCcHH--HHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEEC-CCC--
Confidence 4544433333333221 123444555555666665431 122211 12456889999986 421
Q ss_pred chhHHHHHHHHH
Q psy14484 376 IETFSKKFFVAA 387 (430)
Q Consensus 376 ~~~~a~~~~~~l 387 (430)
.+.+.+|.+.|
T Consensus 317 -~~~~~~f~~~l 327 (394)
T PRK09028 317 -PKAVTALVEGM 327 (394)
T ss_pred -HHHHHHHHHhC
Confidence 11235666665
No 306
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.67 E-value=4.4e-14 Score=136.37 Aligned_cols=287 Identities=13% Similarity=0.118 Sum_probs=169.8
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
+...+...+++++++++.+.. ..+++++|+.|+..++. +.. ++++||+.++.|++........
T Consensus 50 r~~~p~~~~le~~lA~l~g~~--~~v~~~sG~~ai~~~l~-~l~--------~Gd~Vlv~~~~y~~~~~~~~~~------ 112 (390)
T PRK08064 50 RSGNPTREALEDIIAELEGGT--KGFAFASGMAAISTAFL-LLS--------KGDHVLISEDVYGGTYRMITEV------ 112 (390)
T ss_pred CCCChhHHHHHHHHHHHhCCC--CeEEECCHHHHHHHHHH-HhC--------CCCEEEEccCccchHHHHHHHH------
Confidence 455677889999999998633 45667888999988875 332 5678999999887653221110
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
......++.+++.. |++++++.++ +++++|+++. ++|++|.+.+ +++|.++|
T Consensus 113 ---~~~~G~~v~~v~~~-----------------d~~~l~~~l~---~~tklV~l~~-p~NptG~~~d----l~~I~~la 164 (390)
T PRK08064 113 ---LSRFGIEHTFVDMT-----------------NLEEVAQNIK---PNTKLFYVET-PSNPLLKVTD----IRGVVKLA 164 (390)
T ss_pred ---HHHcCCEEEEECCC-----------------CHHHHHHhcC---CCceEEEEEC-CCCCCcEecc----HHHHHHHH
Confidence 01112333444432 6788888885 5688999998 9999998877 99999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCC-ccccEEEEEc-HHHHHhhhccCCcccccccCCC
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGG-YLPLSLVMTT-DKIYNSIYYKNNINIFLHSHSY 308 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG-~~~ig~~~~~-~~~~~~~~~~~~~~~~~~~~t~ 308 (430)
+++|+++|+|++|..+. .... . ....|++ +++|.++|. ..-.|+++++ +++.+.+.. .......
T Consensus 165 ~~~g~~vvvD~a~~~~~-~~~~--~---~~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~------~~~~~g~ 232 (390)
T PRK08064 165 KAIGCLTFVDNTFLTPL-LQKP--L---DLGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYF------LQNSFGA 232 (390)
T ss_pred HHcCCEEEEECCCCccc-ccCc--h---hhCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHH------HHHhcCC
Confidence 99999999999986321 1111 1 2235766 466988762 1234666665 567776654 1121122
Q ss_pred CCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhc-----CCCee----------eEeecceEEEEEEeecCC
Q psy14484 309 SGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-----HPKII----------NFRQKGMIWAFDVIIEDP 373 (430)
Q Consensus 309 ~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~-----~~~~~----------~~~~~g~~~~~~~~~~~~ 373 (430)
..++..+..+...++.+ +...++..+....+.+.|++... +|.+. ...+.|.++.|++. + .
T Consensus 233 ~~~~~~a~l~~~gl~tl--~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~-~-~ 308 (390)
T PRK08064 233 VLGVQDCWLVLRGLKTL--HVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQ-S-E 308 (390)
T ss_pred CCCHHHHHHHHcccCcH--HHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEEC-C-H
Confidence 22333222222222211 11233444455555555543211 11111 23467888999886 3 1
Q ss_pred ccchhHHHHHHHHHHH--C----C----cEEee------------------cCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q psy14484 374 EQIETFSKKFFVAALK--N----E----LLLRP------------------IGNTVYLMPPYILNKNEIQHMTSAIFQT 424 (430)
Q Consensus 374 ~~~~~~a~~~~~~l~~--~----G----v~~~~------------------~~~~lR~~~~~~~t~e~i~~~~~~l~~~ 424 (430)
. .+..|.+.+.= . | ++..| ..+.+|+++.+...++.|+.+.++|+++
T Consensus 309 ---~-~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~~ 383 (390)
T PRK08064 309 ---E-AVRQFVSHVKLPVFAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSYV 383 (390)
T ss_pred ---H-HHHHHHHhCCcceEcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 1 12344444311 0 1 01000 1367999999999888888888888764
No 307
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.67 E-value=1.3e-14 Score=139.61 Aligned_cols=287 Identities=14% Similarity=0.132 Sum_probs=172.9
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
+...+...++++.++++.+ .+++++++||++|+..++..+.. +++.|++..+.|++.........
T Consensus 49 r~~np~~~~lE~~lA~l~g--~~~~l~~~sG~~Ai~~~l~~ll~--------~GD~Vlv~~~~y~~~~~~~~~~~----- 113 (385)
T PRK08574 49 REENPTLRPLEEALAKLEG--GVDALAFNSGMAAISTLFFSLLK--------AGDRVVLPMEAYGTTLRLLKSLE----- 113 (385)
T ss_pred CCCCccHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHHhC--------CCCEEEEcCCCchhHHHHHHHhh-----
Confidence 5566778899999999994 46788889999999999887654 66889998888876532221110
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
.......++. + |++++++++++ .++++|++|. ++|++|.+.+ +++|.++|
T Consensus 114 -----~~g~~v~~~~-~-----------------d~~~l~~~i~~--~~tklV~ie~-p~NPtG~v~d----l~~I~~la 163 (385)
T PRK08574 114 -----KFGVKVVLAY-P-----------------STEDIIEAIKE--GRTKLVFIET-MTNPTLKVID----VPEVAKAA 163 (385)
T ss_pred -----ccCcEEEEEC-C-----------------CHHHHHHhcCc--cCceEEEEEC-CCCCCCEecC----HHHHHHHH
Confidence 0011112221 1 56788888862 2688999999 9999997777 99999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCCcccc-EEEEE-cHHHHHhhhccCCcccccccCCC
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPL-SLVMT-TDKIYNSIYYKNNINIFLHSHSY 308 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~~~i-g~~~~-~~~~~~~~~~~~~~~~~~~~~t~ 308 (430)
+++|+++|+|++++ .+..... . ....|++ +++|.++|..-.+ |++++ ++++.+.+.. +....+.
T Consensus 164 ~~~gi~livD~t~a-~~~~~~~--l---~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~------~~~~~g~ 231 (385)
T PRK08574 164 KELGAILVVDNTFA-TPLLYRP--L---RHGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWE------WRRRLGT 231 (385)
T ss_pred HHcCCEEEEECCCC-ccccCCh--h---hhCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHH------HHHhcCC
Confidence 99999999999985 2111111 1 1234655 5779998621234 53555 5677666543 1111222
Q ss_pred CCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhc-----CCCeee----------E--eecceEEEEEEeec
Q psy14484 309 SGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-----HPKIIN----------F--RQKGMIWAFDVIIE 371 (430)
Q Consensus 309 ~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~-----~~~~~~----------~--~~~g~~~~~~~~~~ 371 (430)
..++..+..+...|+.+. ...++..+++.++.+.|+..+. +|.... . .+-|.++.|++. .
T Consensus 232 ~~~p~~a~l~l~~l~tL~--~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~-~ 308 (385)
T PRK08574 232 IMQPFEAYLVLRGLKTLE--VRFERQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVK-G 308 (385)
T ss_pred CCCHHHHHHHHcccCcHH--HHHHHHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeC-C
Confidence 334554544444444332 2344445566666676654321 222211 1 246889999986 4
Q ss_pred CCccchhHHHHHHHHHHH--CCc--------EEee------------------cCCEEEEeCCCCCCHHHHHHHHHHHHH
Q psy14484 372 DPEQIETFSKKFFVAALK--NEL--------LLRP------------------IGNTVYLMPPYILNKNEIQHMTSAIFQ 423 (430)
Q Consensus 372 ~~~~~~~~a~~~~~~l~~--~Gv--------~~~~------------------~~~~lR~~~~~~~t~e~i~~~~~~l~~ 423 (430)
+ .+.+.+|.+.|.= .+. +..| ..+.+|+++.+. +.+.+++.|++
T Consensus 309 ~----~~~~~~~~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE----~~~dli~dl~~ 380 (385)
T PRK08574 309 G----RDAVLKFLRSLKLIKPSPSLGGVESLATYPVKSAASPIPEEDRKALGITEDLVRLSVGLE----DVEDLIEDLDQ 380 (385)
T ss_pred C----HHHHHHHHHcCCcceEccCCCCCcceeeCCCcCCcccCCHHHHHhcCCCCCeEEEEeccC----CHHHHHHHHHH
Confidence 2 1123556665431 111 1111 025789986654 46666677777
Q ss_pred HHHH
Q psy14484 424 TFNE 427 (430)
Q Consensus 424 ~l~~ 427 (430)
+|++
T Consensus 381 al~~ 384 (385)
T PRK08574 381 ALGS 384 (385)
T ss_pred HHhc
Confidence 6654
No 308
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.67 E-value=2.6e-14 Score=139.00 Aligned_cols=164 Identities=15% Similarity=0.163 Sum_probs=117.3
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
+...+...+|++.|+++.+ .+..++++||++|+..++..+.. ++++|++..+.|++.........
T Consensus 54 r~~~pt~~~Le~~lA~l~g--~~~~l~~ssG~~Ai~~al~al~~--------~Gd~Vl~~~~~Y~~t~~~~~~~l----- 118 (425)
T PRK06084 54 RIMNPTNDVLEQRVAALEG--GVGALAVASGMAAITYAIQTIAE--------AGDNIVSVAKLYGGTYNLLAHTL----- 118 (425)
T ss_pred CCCCchHHHHHHHHHHHhC--CCceeEehhHHHHHHHHHHHHhC--------CCCEEEEeCCCcchHHHHHHHhc-----
Confidence 4566778899999999984 45778899999999999988765 56789999999986532221110
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
.....+..+++.. |+++++++++ +++++|++++ ++|++|.+.+ +++|.++|
T Consensus 119 ----~~~gi~v~~~d~~-----------------d~e~le~ai~---~~tklV~les-p~NPtG~v~d----l~~I~~la 169 (425)
T PRK06084 119 ----PRIGIETRFAAHD-----------------DIAALEALID---ERTKAVFCES-IGNPAGNIID----IQALADAA 169 (425)
T ss_pred ----ccceeEEEEECCC-----------------CHHHHHHHhc---cCCcEEEEeC-CCCCCCeecC----HHHHHHHH
Confidence 0011122233322 7889999886 4678899999 9999997777 99999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCCccccEEEEEc
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPLSLVMTT 286 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~~~ig~~~~~ 286 (430)
+++|+++|+|++++ .+... ......+|++ +++|.++|...++|.+++.
T Consensus 170 ~~~~i~vVvD~a~a-~~~~~-----~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~ 219 (425)
T PRK06084 170 HRHGVPLIVDNTVA-TPVLC-----RPFEHGADIVVHSLTKYIGGHGTSIGGIVVD 219 (425)
T ss_pred HHcCCEEEEECCCc-ccccC-----ChhhcCCCEEEECchhcccccccceeEEEEe
Confidence 99999999999986 22211 1123346766 5779998843677876663
No 309
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.66 E-value=2.2e-14 Score=136.83 Aligned_cols=316 Identities=11% Similarity=0.026 Sum_probs=192.3
Q ss_pred CCHHHHHHHHHHHhhccc-----cccCCCCC---HHHHHHHHHHHhhcCCC-CCeE-EEcCCchHHHHHHHHHHHHhhhh
Q psy14484 51 SNSYINKALKNQLNKLEH-----VMLSNLTH---KPVIKLSEKLSSLTQYK-LGHC-FYGSDGASAVEVALKMSFHYWYN 120 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~~~~-----~~~~~~~~---~~~~~l~~~l~~~~~~~-~~~v-~~~~sgteA~~~al~~~~~~~~~ 120 (430)
-+++|++|+.+.+.+... ........ +..++..+.+.++++.. ..++ +++.||+.|+++++..+..
T Consensus 14 ~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~---- 89 (360)
T PRK05355 14 LPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLG---- 89 (360)
T ss_pred CCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCC----
Confidence 478999999988644310 01111122 66788889999999742 2345 4457999999999887765
Q ss_pred cCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHH-HHHhCC
Q psy14484 121 KGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEI-LLKKNH 199 (430)
Q Consensus 121 ~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~-~l~~~~ 199 (430)
+.+++++...+..|+...-.+-. .... ..+..+...... +..++++ .++
T Consensus 90 ----~g~~~l~i~~G~fg~r~~~~a~~-----------~g~~-~~~~~~~~~g~~-----------~~~~~~~~~l~--- 139 (360)
T PRK05355 90 ----GGKKADYVDTGSWSKKAIKEAKK-----------YGEV-NVAASSEDDGFT-----------YIPPLDEWQLS--- 139 (360)
T ss_pred ----CCCeEEEEECCHHHHHHHHHHHH-----------hCCc-eEEecccccCCC-----------CCCChhhccCC---
Confidence 44566666666666543211110 1111 122222101110 2233333 453
Q ss_pred CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeee--cccCCCc
Q psy14484 200 NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITGGY 277 (430)
Q Consensus 200 ~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s--K~l~gG~ 277 (430)
.++++|.+.. ..+++|...++ +++| +|+++++|.+++ +|.. ....+.+ |++++| |.++.
T Consensus 140 ~~~~~V~~th-~eTstGv~~~~---i~~i------~g~l~vVDavss-~g~~--~idv~~~----d~~~~ssqK~lgP-- 200 (360)
T PRK05355 140 DDAAYVHYTS-NETIDGTEFHE---LPDT------GDVPLVADMSSD-ILSR--PIDVSKF----GLIYAGAQKNIGP-- 200 (360)
T ss_pred CCCCEEEEcc-CCCcceEecCc---cccc------CCCcEEEEcCcc-ccCc--cCCHHHc----cEEEEeccccccC--
Confidence 3567788877 77888977642 5555 899999999997 5322 2333322 477776 88752
Q ss_pred cccEEEEEcHHHHHhhhccCCcc-------cccccCCCCCCHHHHHHHHHHHHHHhhc----CHHHHHHHHHHHHHHHHH
Q psy14484 278 LPLSLVMTTDKIYNSIYYKNNIN-------IFLHSHSYSGNPLACCAALATLEIFNKD----NILQRISQDMKKITKALT 346 (430)
Q Consensus 278 ~~ig~~~~~~~~~~~~~~~~~~~-------~~~~~~t~~~~~~~~~aa~~~l~~~~~~----~~~~~~~~~~~~l~~~l~ 346 (430)
..+|.+++++++.+.+.+. ... .......++++.....+..++|+.+.+. +..++.+++.+++++.|+
T Consensus 201 ~Glg~l~~s~~~l~~~~~~-~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~ 279 (360)
T PRK05355 201 AGLTIVIVREDLLGRALPS-IPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAID 279 (360)
T ss_pred CceEEEEECHHHHhhcccC-CChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHH
Confidence 3599999999988775441 000 0001112345566677777888877654 345666778888888888
Q ss_pred chhcCCCeee-EeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec---CCEEEEeCCCCCCHHHHHHHHHHHH
Q psy14484 347 SLITHPKIIN-FRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI---GNTVYLMPPYILNKNEIQHMTSAIF 422 (430)
Q Consensus 347 ~l~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~---~~~lR~~~~~~~t~e~i~~~~~~l~ 422 (430)
++.-...+.. ....+.++.|..+ .. .....+.+.+.++|+.+.++ .+.+|+++..++|++||+.+++.|+
T Consensus 280 ~~~~~~~~~~~~~rs~~v~sf~~~-~~-----~~~~~~~~~~~~~Gi~~~~~~~~~g~vRiS~~~~nt~eei~~l~~~l~ 353 (360)
T PRK05355 280 SSDFYRNPVAPEDRSRMNVPFTLA-DE-----ELDKKFLAEAKAAGLVGLKGHRSVGGMRASIYNAMPLEGVQALVDFMK 353 (360)
T ss_pred hCCCcccCCChhhcCCcEEEEEcC-Ch-----HHHHHHHHHHHHCCCcccCCCCccCcEEEECCCCCCHHHHHHHHHHHH
Confidence 7631111111 1122355666655 32 11246777888999998554 2679999999999999999999999
Q ss_pred HHHH
Q psy14484 423 QTFN 426 (430)
Q Consensus 423 ~~l~ 426 (430)
+++.
T Consensus 354 ~~~~ 357 (360)
T PRK05355 354 EFER 357 (360)
T ss_pred HHHH
Confidence 9765
No 310
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.66 E-value=3.5e-14 Score=135.72 Aligned_cols=172 Identities=10% Similarity=0.025 Sum_probs=118.0
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
+..++..+.|++.++.+-+ .+..++++||++|+..++..+.. ++++||+.++.|.++.......
T Consensus 60 R~gnPt~~~Le~~la~le~--~~~~v~~sSG~aAi~~~l~all~--------~GD~Vlv~~~~Y~~~~~l~~~~------ 123 (395)
T PRK05967 60 TRGTPTTDALCKAIDALEG--SAGTILVPSGLAAVTVPFLGFLS--------PGDHALIVDSVYYPTRHFCDTM------ 123 (395)
T ss_pred CCCChHHHHHHHHHHHHhC--CCCEEEECcHHHHHHHHHHHhcC--------CCCEEEEccCCcHHHHHHHHHH------
Confidence 5667888999999998863 34456677799999999887754 6789999999998764221111
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
......++.+++.. +.+.++++++ +++++|++|. +.|+.+...+ +++|.++|
T Consensus 124 ---l~~~Gi~v~~vd~~-----------------~~e~l~~al~---~~TklV~les-PsNP~l~v~d----l~~I~~la 175 (395)
T PRK05967 124 ---LKRLGVEVEYYDPE-----------------IGAGIAKLMR---PNTKVVHTEA-PGSNTFEMQD----IPAIAEAA 175 (395)
T ss_pred ---HHhcCeEEEEeCCC-----------------CHHHHHHhcC---cCceEEEEEC-CCCCCCcHHH----HHHHHHHH
Confidence 11112233343221 3467888885 5689999998 8888776666 99999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCC-CccccEEEEEcHHHHHhhh
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITG-GYLPLSLVMTTDKIYNSIY 294 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~g-G~~~ig~~~~~~~~~~~~~ 294 (430)
+++|+++++|++++... .+....+..|++ +.+|.++| |-.-.|++..+++..+.+.
T Consensus 176 ~~~g~~vvVD~t~a~p~------~~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~ 234 (395)
T PRK05967 176 HRHGAIVMMDNTWATPL------YFRPLDFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLL 234 (395)
T ss_pred HHhCCEEEEECCccCce------ecChhHcCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHH
Confidence 99999999999986321 122223345666 57799887 3345666666776555443
No 311
>PLN02880 tyrosine decarboxylase
Probab=99.66 E-value=7.5e-14 Score=137.84 Aligned_cols=325 Identities=10% Similarity=0.058 Sum_probs=193.5
Q ss_pred CCHHHHHHHHHHHhhcCCCCC-------eEEEcCCchHHHHHHHHHHHHhhhh-cCCCC-CcEEEEEcCCCCCcchhhhc
Q psy14484 75 THKPVIKLSEKLSSLTQYKLG-------HCFYGSDGASAVEVALKMSFHYWYN-KGFLN-KKKFICLQNSYHGETLGALA 145 (430)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~-------~v~~~~sgteA~~~al~~~~~~~~~-~g~~~-~~~vl~~~~~yhg~~~~~~~ 145 (430)
.+....++.++++++++.+.+ .-++++|||+||..|+.++|..... .|..+ +..++..+..-|-+..-+..
T Consensus 120 ~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~ 199 (490)
T PLN02880 120 ATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQ 199 (490)
T ss_pred cHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHH
Confidence 446777888999999863321 3688999999999999999975432 22111 23344444444654332222
Q ss_pred cCCCccchhhhhccCCCeeEeCCCC--CCCCCCCCChhHHHHHHHHHHHHHHHhC---CCCeEEEEEccccccCCCcccC
Q psy14484 146 VTNIQSFKEIYTSLLNKTYIITTPD--SRNINKGNSANEIARCAIFDLEILLKKN---HNKIAAIIIEPLVQCAGGMIMY 220 (430)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~~~vi~ep~v~~~~G~~~~ 220 (430)
+.+-. ...++.++.+. .++. |+++|+++|++. +..+.+|+.+- ...++|.+.|
T Consensus 200 ~lGlg---------~~~v~~Vp~d~~~~~~m------------d~~~L~~~i~~~~~~g~~p~~vvata-GTT~~GaiDp 257 (490)
T PLN02880 200 IAGIH---------PENCRLLKTDSSTNYAL------------APELLSEAISTDLSSGLIPFFLCATV-GTTSSTAVDP 257 (490)
T ss_pred HcCCC---------HHHEEEeecCCCcCCcC------------CHHHHHHHHHHHHHCCCccEEEEEec-CCCcCcccCc
Confidence 22210 01234555543 2233 889999998753 33466777776 7778898888
Q ss_pred ChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCC-CCceeeee--cccCCCccccEEEEEcHH--HHHhhhc
Q psy14484 221 DSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI-WPDFLCLS--KGITGGYLPLSLVMTTDK--IYNSIYY 295 (430)
Q Consensus 221 ~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~-~~d~~~~s--K~l~gG~~~ig~~~~~~~--~~~~~~~ 295 (430)
+++|.++|++||+++|||.+|.|+...-..+-....++ .+|-+++. |.+... .+.|+++.+.. +.+.+..
T Consensus 258 ----l~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P-~~~g~llvr~~~~l~~~~~~ 332 (490)
T PLN02880 258 ----LLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTN-FDCSLLWVKDRNALIQSLST 332 (490)
T ss_pred ----HHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCC-ccEEEEEEeCHHHHHHHHcc
Confidence 99999999999999999999986532211111122343 47777655 887665 57888888742 2222221
Q ss_pred cC-----Cccc---ccccCCC---CCCHHHHHHHHHHHHHHhhcCHHHHHH---HHHHHHHHHHHchhcCCCeeeEeecc
Q psy14484 296 KN-----NINI---FLHSHSY---SGNPLACCAALATLEIFNKDNILQRIS---QDMKKITKALTSLITHPKIINFRQKG 361 (430)
Q Consensus 296 ~~-----~~~~---~~~~~t~---~~~~~~~~aa~~~l~~~~~~~~~~~~~---~~~~~l~~~l~~l~~~~~~~~~~~~g 361 (430)
.. .... ......+ .+..+.....+.+|+.+..+++.++++ ++++++.+.|++......+. ++.-
T Consensus 333 ~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~--~~~~ 410 (490)
T PLN02880 333 NPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVT--PRIF 410 (490)
T ss_pred CHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEec--CCce
Confidence 00 0000 0000000 111222344555677666677877777 88888888887543222221 2334
Q ss_pred eEEEEEEeecCCcc---chhHHHHHHHHHHHCCcEEe-ec----CCEEEEeCCCCC-CHHHHHHHHHHHHHHHHHhh
Q psy14484 362 MIWAFDVIIEDPEQ---IETFSKKFFVAALKNELLLR-PI----GNTVYLMPPYIL-NKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 362 ~~~~~~~~~~~~~~---~~~~a~~~~~~l~~~Gv~~~-~~----~~~lR~~~~~~~-t~e~i~~~~~~l~~~l~~~~ 429 (430)
.+++|.+. +.... ...+..++.++|.+.|-+.. +. ..++|+++.... ++++++.+++.|.+...+++
T Consensus 411 ~iv~Fr~~-~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~ 486 (490)
T PLN02880 411 SLVCFRLV-PPKNNEDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLL 486 (490)
T ss_pred EEEEEEEe-CCCCChhhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 46666665 32211 12233567777777765443 32 257899876665 46999999999999887764
No 312
>PLN02263 serine decarboxylase
Probab=99.66 E-value=3.4e-13 Score=129.95 Aligned_cols=292 Identities=11% Similarity=0.047 Sum_probs=185.1
Q ss_pred CHHHHHHHHHHHhhcCCCCC--eEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccch
Q psy14484 76 HKPVIKLSEKLSSLTQYKLG--HCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFK 153 (430)
Q Consensus 76 ~~~~~~l~~~l~~~~~~~~~--~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~ 153 (430)
.+...++.++++++++.+.+ .-++|+||||||..|+.++|.+. + +.++..+..-|-+..
T Consensus 132 ~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~------~-~~vvy~S~~aH~Sv~------------ 192 (470)
T PLN02263 132 RQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVF------P-DGILYASRESHYSVF------------ 192 (470)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhc------C-CcEEEEcCCccHHHH------------
Confidence 45667888999999975443 36889999999999999999853 2 335665656664422
Q ss_pred hhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHH
Q psy14484 154 EIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICN 233 (430)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~ 233 (430)
+....+..+.+.++.+...+. |+++|+++|.+...++..|+.+- ...+.|.+-| +++|.++|+
T Consensus 193 KAa~llgi~~~~Vp~d~~g~m------------D~~aL~~aI~~d~~~P~iVvata-GTT~~GAiDp----i~eIa~i~~ 255 (470)
T PLN02263 193 KAARMYRMECVKVDTLVSGEI------------DCADFKAKLLANKDKPAIINVNI-GTTVKGAVDD----LDLVIKTLE 255 (470)
T ss_pred HHHHhcCCcceEeccCCCCcC------------cHHHHHHHHHhCCCCcEEEEEEe-cCCCCcCCCC----HHHHHHHHH
Confidence 222223334556666554444 99999999986544466676676 7778898888 999999999
Q ss_pred hcCC-----EEEEeccccCCCC----cccccccccCCCCCceeeee--cccCCCccccEEEEEcHHHHHhhhccCCcccc
Q psy14484 234 NYNI-----HLIADEIAVGCGR----TGKFFACEHAEIWPDFLCLS--KGITGGYLPLSLVMTTDKIYNSIYYKNNINIF 302 (430)
Q Consensus 234 ~~gi-----~li~DEv~~g~g~----~g~~~~~~~~~~~~d~~~~s--K~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~ 302 (430)
++|+ +|+||.++.|+.. ....+.+. ...|=++++ |.++.. ++.|.++.+++..+.+... ...+
T Consensus 256 ~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df~---~~vDSIsvD~HK~l~~P-~~cgvll~R~~~~~~~~~~--~~Yl 329 (470)
T PLN02263 256 ECGFSQDRFYIHCDGALFGLMMPFVKRAPKVTFK---KPIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSN--VEYL 329 (470)
T ss_pred HcCCccCCeeEEEeccchhhHhhhcccccccCCC---cCccEEEECCccccCCC-cCEEEEEEehhhHhhhccC--hHhh
Confidence 9997 9999999987632 10111111 114444544 766655 6889999997655443321 0000
Q ss_pred c-ccCCCCCC--HHHHHHHHHHHHHHhhcCHHHHH---HHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccc
Q psy14484 303 L-HSHSYSGN--PLACCAALATLEIFNKDNILQRI---SQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQI 376 (430)
Q Consensus 303 ~-~~~t~~~~--~~~~~aa~~~l~~~~~~~~~~~~---~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 376 (430)
. ...|..++ .......+.+|+.+..+++.+.+ .++++++.++|++. +...-..+..+.+.|..+ .
T Consensus 330 ~~~d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~---g~~~~~~p~s~~V~f~~p-~----- 400 (470)
T PLN02263 330 ASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREA---GISAMLNELSSTVVFERP-K----- 400 (470)
T ss_pred CCCCCCcCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC---CCeEEeCCCceEEEEecC-c-----
Confidence 0 00122222 12345666777766655655544 55677787888765 222223344444444333 1
Q ss_pred hhHHHHHHHHHHHCCcEEeecCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 377 ETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 377 ~~~a~~~~~~l~~~Gv~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
.. +..+|..+...++.+++.+...++.+.+|++++.|++...
T Consensus 401 ----~~----~~~~gW~L~~~~~~~Hivvmphv~~~~id~fi~DL~~~~~ 442 (470)
T PLN02263 401 ----DE----EFVRRWQLACQGNIAHVVVMPSVTIEKLDYFLKELVEKRS 442 (470)
T ss_pred ----hH----HhhcceEEccCCCcEEEEEcCCCCHHHHHHHHHHHHHHHh
Confidence 11 1246777777777788877777789999999999988765
No 313
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.66 E-value=2.1e-13 Score=132.00 Aligned_cols=314 Identities=13% Similarity=0.065 Sum_probs=181.7
Q ss_pred HHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEE
Q psy14484 53 SYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICL 132 (430)
Q Consensus 53 p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~ 132 (430)
++-.+++.+.+.... ....+...++++.+++.++ .++.++++||++|+..+++++.- .+++.|++.
T Consensus 10 ~~~~~~v~~~~~~~~-----~~~g~~~~~le~~la~~~g--~~~~v~~~sgt~al~~~l~al~~-------~~Gd~Viv~ 75 (380)
T TIGR03588 10 QDDIDAVVEVLKSDF-----LTQGPTVPAFEEALAEYVG--AKYAVAFNSATSALHIACLALGV-------GPGDRVWTT 75 (380)
T ss_pred HHHHHHHHHHHhcCC-----ccCChhHHHHHHHHHHHHC--CCeEEEEcCHHHHHHHHHHHcCC-------CCCCEEEeC
Confidence 445677777665432 1223456788999999985 35677788999999999987621 156789998
Q ss_pred cCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC-CCCCCCCCCChhHHHHHHHHHHHHHHHhCC-CCeEEEEEccc
Q psy14484 133 QNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP-DSRNINKGNSANEIARCAIFDLEILLKKNH-NKIAAIIIEPL 210 (430)
Q Consensus 133 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-~~~~~vi~ep~ 210 (430)
+++|++........ ..+.++++.. .... .|++++++.+++.+ +++++|++..
T Consensus 76 ~~~~~~~~~~~~~~-------------G~~~~~~~~~~~~~~------------~d~~~l~~~i~~~~~~~t~~v~~~~- 129 (380)
T TIGR03588 76 PITFVATANCALYC-------------GAKVDFVDIDPDTGN------------IDEDALEKKLAAAKGKLPKAIVPVD- 129 (380)
T ss_pred CcchHHHHHHHHHc-------------CCEEEEEecCCCcCC------------cCHHHHHHHhhcccCCCceEEEEeC-
Confidence 88887653222211 1223444442 2211 28899999996321 3566666432
Q ss_pred cccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCC--CCceeeee----cccCCCccccEEEE
Q psy14484 211 VQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI--WPDFLCLS----KGITGGYLPLSLVM 284 (430)
Q Consensus 211 v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~--~~d~~~~s----K~l~gG~~~ig~~~ 284 (430)
..|...+ +++|.++|++||+++|+|++|+ +|-. +.-...+. .-|+.++| |.++.| ..|+++
T Consensus 130 ---~~G~~~~----~~~i~~l~~~~~~~lI~D~a~a-~g~~---~~~~~~g~~~~~d~~~~S~~~~K~~~~~--~GG~v~ 196 (380)
T TIGR03588 130 ---FAGKSVD----MQAIAALAKKHGLKIIEDASHA-LGAE---YGGKPVGNCRYADATVFSFHPVKIITTA--EGGAVT 196 (380)
T ss_pred ---CCCccCC----HHHHHHHHHHcCCEEEEECCCc-ccCc---cCCEeCCCccccceEEEecCCCCccccc--CceEEE
Confidence 2465555 9999999999999999999998 3211 11111222 34877766 777654 345566
Q ss_pred Ec-HHHHHhhhc---cCCccc-----------cc-----ccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q psy14484 285 TT-DKIYNSIYY---KNNINI-----------FL-----HSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKA 344 (430)
Q Consensus 285 ~~-~~~~~~~~~---~~~~~~-----------~~-----~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~ 344 (430)
.+ +++.+.+.. .+.... .. .+..+..+.+..+.+...|+.+ +...++-+++.+++.+.
T Consensus 197 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l--~~~~~~r~~~~~~~~~~ 274 (380)
T TIGR03588 197 TNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKKL--DRFVAKRREIAARYDRL 274 (380)
T ss_pred ECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Confidence 54 566554432 010000 00 0111222334434444444433 44566777788888888
Q ss_pred HHchhcCCCeeeEee-cc--eEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec------------------------
Q psy14484 345 LTSLITHPKIINFRQ-KG--MIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI------------------------ 397 (430)
Q Consensus 345 l~~l~~~~~~~~~~~-~g--~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~------------------------ 397 (430)
|..+..........+ .. .++.+.+. .. .... .+.+.+.|.++||.+...
T Consensus 275 L~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~-~~~~--r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~ 350 (380)
T TIGR03588 275 LKDLPYFTPLTIPLGSKSAWHLYPILLD-QE-FGCT--RKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAEN 350 (380)
T ss_pred hcCCCCccCCCCCCCCEeEEEEEEEEEC-Cc-CCCC--HHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHH
Confidence 877632211111001 11 12222232 21 0011 367889999999866410
Q ss_pred --CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 398 --GNTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 398 --~~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
...+++.++...|++|++.+++.|+++|
T Consensus 351 ~~~~~l~lP~~~~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 351 FYLAEISLPLHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred HHhceEEcCCCCCCCHHHHHHHHHHHHHhC
Confidence 1457777787889999999999998764
No 314
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.66 E-value=2.8e-14 Score=139.06 Aligned_cols=166 Identities=14% Similarity=0.122 Sum_probs=120.8
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCcc
Q psy14484 72 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 151 (430)
Q Consensus 72 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~ 151 (430)
.++.++...+++++++++.+ .+.+++++||++|+..++..++. ++++||+.++.|++......
T Consensus 52 sr~~~p~~~~le~~lA~l~g--~~~~v~~~sG~~Ai~~al~~l~~--------~Gd~Vl~~~~~y~~t~~~~~------- 114 (418)
T TIGR01326 52 SRLMNPTTDVLEQRIAALEG--GVAALAVASGQAAITYAILNLAQ--------AGDNIVSSSYLYGGTYNLFK------- 114 (418)
T ss_pred ECCCChhHHHHHHHHHHHhC--CCeEEEEccHHHHHHHHHHHHhC--------CCCEEEEECCCcHHHHHHHH-------
Confidence 35677888999999999995 46889999999999999987764 56788998888876422110
Q ss_pred chhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHH
Q psy14484 152 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 231 (430)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l 231 (430)
........+..+++.+ |+++++++++ +++++|++|. ++|++|.+.+ +++|.++
T Consensus 115 --~~~~~~G~~v~~v~~~-----------------d~~~l~~~l~---~~t~~V~le~-p~NPtg~v~d----l~~I~~l 167 (418)
T TIGR01326 115 --HTLKRLGIEVRFVDPD-----------------DPEEFEKAID---ENTKAVFAET-IGNPAINVPD----IEAIAEV 167 (418)
T ss_pred --HHHHHcCcEEEEECCC-----------------CHHHHHHhcC---cCCeEEEEEC-CCCCCCeecC----HHHHHHH
Confidence 0011112233344322 7788998885 4678899999 9999997776 9999999
Q ss_pred HHhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCCccccEEEEEcH
Q psy14484 232 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPLSLVMTTD 287 (430)
Q Consensus 232 ~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~~~ig~~~~~~ 287 (430)
|+++|+++|+||+++ .+.. .......+|++ +++|.++|.+.++|++++++
T Consensus 168 a~~~~i~livD~t~~-~~~~-----~~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 168 AHAHGVPLIVDNTFA-TPYL-----CRPIDHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred HHHcCCEEEEECCCc-hhhc-----CCchhcCCeEEEECccccccCCccceEEEEEec
Confidence 999999999999986 2211 11223346776 67899998337999988864
No 315
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.65 E-value=5.3e-14 Score=137.14 Aligned_cols=163 Identities=17% Similarity=0.195 Sum_probs=116.5
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
+..++...++++.++++.+ .+..++++||++|+.++++++.. +++.||+..+.|++.....
T Consensus 59 r~~~p~~~~le~~lA~l~g--~~~al~~~SG~~Ai~~al~all~--------pGd~VIv~~~~y~~t~~~~--------- 119 (427)
T PRK05994 59 RITNPTNAVLEERVAALEG--GTAALAVASGHAAQFLVFHTLLQ--------PGDEFIAARKLYGGSINQF--------- 119 (427)
T ss_pred CCCCccHHHHHHHHHHHhC--CCcEEEEcCHHHHHHHHHHHHhC--------CCCEEEEecCcchhHHHHH---------
Confidence 4455677889999999984 45688999999999999988764 6688999999998752211
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
..........+.+++.. |+++++++++ +++++|++|. ++|++|.+.+ +++|.++|
T Consensus 120 ~~~~~~~G~~v~~vd~~-----------------d~~~l~~ai~---~~tklV~ves-p~NptG~v~d----l~~I~~la 174 (427)
T PRK05994 120 GHAFKSFGWQVRWADAD-----------------DPASFERAIT---PRTKAIFIES-IANPGGTVTD----IAAIAEVA 174 (427)
T ss_pred HHHHHhcCcEEEEECCC-----------------CHHHHHHhcC---cCCeEEEEEC-CCCCCCeecC----HHHHHHHH
Confidence 00011112233344332 6788888885 4789999999 9999998877 99999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCceee--eecccCCCccccEEEEE
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGGYLPLSLVMT 285 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~--~sK~l~gG~~~ig~~~~ 285 (430)
+++|+++|+|++++ .+. ........+|+++ ++|.++|..-.+|+++.
T Consensus 175 ~~~gi~livD~a~a-~~~-----~~~pl~~gaDivv~S~tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 175 HRAGLPLIVDNTLA-SPY-----LIRPIEHGADIVVHSLTKFLGGHGNSMGGIIV 223 (427)
T ss_pred HHcCCEEEEECCcc-ccc-----cCCccccCCcEEEEcCccccCCCCCcEEEEEE
Confidence 99999999999986 211 1222345678775 66999872236776655
No 316
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.65 E-value=5.5e-14 Score=135.17 Aligned_cols=285 Identities=15% Similarity=0.183 Sum_probs=167.6
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccch
Q psy14484 74 LTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFK 153 (430)
Q Consensus 74 ~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~ 153 (430)
...+..+++++.++++++ .+.+++++||+.|+..++. +.. +++.||+.++.|++.......
T Consensus 44 ~~~p~~~~le~~la~l~g--~~~~l~~~sG~~al~~~l~-ll~--------~Gd~Vl~~~~~y~~~~~~~~~-------- 104 (378)
T TIGR01329 44 SGNPTRTALESLLAKLDK--ADRAFAFSSGMAALDVITR-LLN--------NGDEIIAGDDLYGGTDRLLTQ-------- 104 (378)
T ss_pred CCChHHHHHHHHHHHHhC--CCcEEEECCHHHHHHHHHH-HhC--------CCCEEEEcCCCchHHHHHHHH--------
Confidence 345678899999999985 3678888999999887765 332 567888888888654211100
Q ss_pred hhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHH
Q psy14484 154 EIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICN 233 (430)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~ 233 (430)
..........+++.. |+++++++++ +++++|++|. +.|++|.+.+ +++|.++|+
T Consensus 105 -~~~~~G~~v~~vd~~-----------------d~~~le~~i~---~~tklv~le~-psnptg~v~d----l~~I~~la~ 158 (378)
T TIGR01329 105 -VVPRSGVVVVHVDTT-----------------DLDKVKAALG---PKTKLVLLES-PTNPLQKIVD----IRKISEMAH 158 (378)
T ss_pred -HHHHcCcEEEEeCCC-----------------CHHHHHHhcC---cCceEEEEEC-CCCCCCeeec----HHHHHHHHH
Confidence 001112333444432 6788888885 5788999999 9999997777 999999999
Q ss_pred hcCCEEEEeccccCCCCcccccccccCCCCCceee--eecccCCC-ccccEEEEEcH-HHHHhhhccCCcccccccCCCC
Q psy14484 234 NYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGG-YLPLSLVMTTD-KIYNSIYYKNNINIFLHSHSYS 309 (430)
Q Consensus 234 ~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~--~sK~l~gG-~~~ig~~~~~~-~~~~~~~~~~~~~~~~~~~t~~ 309 (430)
++|+++|+|+++. .+..... . ....|+++ ++|.++|+ ....|++++++ .+.+.+.. ........
T Consensus 159 ~~g~~vivD~a~~-~~~~~~~--l---~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~------~~~~~G~~ 226 (378)
T TIGR01329 159 AQNALVVVDNTMM-SPLLCNP--L---ELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYF------LQNSTGSG 226 (378)
T ss_pred HcCCEEEEECCCc-ccccCCh--h---hcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHH------HHHhcCCc
Confidence 9999999999974 2111111 1 22457764 56988863 23477887754 44454543 11111222
Q ss_pred CCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchh-----cCCCee----------eEeecceEEEEEEeecCCc
Q psy14484 310 GNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKII----------NFRQKGMIWAFDVIIEDPE 374 (430)
Q Consensus 310 ~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~-----~~~~~~----------~~~~~g~~~~~~~~~~~~~ 374 (430)
.++..+..+...|+.+ +...++-.+++..+.+.|++.+ .+|.+. ...+.|.++.|++. +
T Consensus 227 ~~~~~a~l~~~~l~tl--~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~-~--- 300 (378)
T TIGR01329 227 LAPFDCWLLLRGIKTL--AIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETG-S--- 300 (378)
T ss_pred CCHHHHHHHHccCCCH--HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEEC-C---
Confidence 3444332222222211 1223444445555555554321 112111 12356788888886 3
Q ss_pred cchhHHHHHHHHHHHCCcEEe----------e------------------cCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 375 QIETFSKKFFVAALKNELLLR----------P------------------IGNTVYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 375 ~~~~~a~~~~~~l~~~Gv~~~----------~------------------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
.+.+.+|+..|...++.++ | ..+.+||++.+. +.+.+++.|+++|+
T Consensus 301 --~~~~~~~~~~L~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE----~~~dl~~dl~~al~ 374 (378)
T TIGR01329 301 --VALSKRLVEATKLFSITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGIE----DVDDLISDLDIAFV 374 (378)
T ss_pred --HHHHHHHHHhCcCcccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccC----CHHHHHHHHHHHHH
Confidence 1113567777644443322 1 025788876644 56666777777765
Q ss_pred H
Q psy14484 427 E 427 (430)
Q Consensus 427 ~ 427 (430)
+
T Consensus 375 ~ 375 (378)
T TIGR01329 375 T 375 (378)
T ss_pred h
Confidence 4
No 317
>KOG1357|consensus
Probab=99.64 E-value=1.4e-14 Score=133.43 Aligned_cols=325 Identities=15% Similarity=0.125 Sum_probs=199.9
Q ss_pred EEEecccccccccCCCC--CHHHHHHHHHHHhhcccc----ccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHH
Q psy14484 35 RYLDAISSWWVNLFGHS--NSYINKALKNQLNKLEHV----MLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVE 108 (430)
Q Consensus 35 ~~lD~~~~~~~~~lG~~--~p~v~~a~~~~~~~~~~~----~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~ 108 (430)
..|++.| -++||++ +-.-.+++.+.++++... ..-.+..+.+.++++..++.++ .++.+.| +-|...|.
T Consensus 137 ~~lNlgS---YNYLGFa~~~g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g-~e~a~vF-~mGf~TNs 211 (519)
T KOG1357|consen 137 RCLNLGS---YNYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLG-VEDAIVF-SMGFATNS 211 (519)
T ss_pred eeeeecc---cccccccccCCcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcC-CcceEEE-eccccccc
Confidence 4566544 4666653 333344444455554432 1123556888999999999985 4444444 55566666
Q ss_pred HHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHH
Q psy14484 109 VALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAI 188 (430)
Q Consensus 109 ~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 188 (430)
.-+-.+. ++...+.-+.--|++......+++.- .+. +.| ||+
T Consensus 212 ~~~p~l~---------~~gsLIiSDelNHaSi~~GaRLSgAt------------iRV--fkH---------------Ndm 253 (519)
T KOG1357|consen 212 MNIPSLL---------GKGSLIISDELNHASLITGARLSGAT------------TRV--FRH---------------NDM 253 (519)
T ss_pred cCcceee---------cCCcceeeccccchheeccccccCce------------EEE--Eec---------------CCH
Confidence 6655554 44556666777888766666555521 122 232 388
Q ss_pred HHHHHHHHhC----------CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC-C-CCcccccc
Q psy14484 189 FDLEILLKKN----------HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVG-C-GRTGKFFA 256 (430)
Q Consensus 189 ~~le~~l~~~----------~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g-~-g~~g~~~~ 256 (430)
.+||+.|++. +-+...+++|. +.++.|+++. |.++..+++|+.++|+.||+|+. . |++| .+.
T Consensus 254 ~~LEr~Lrd~I~~gqP~Thrp~kki~iiveg-iysmEg~iv~----Lp~vvalkkkykayl~lDEAHSiGA~g~tG-rgv 327 (519)
T KOG1357|consen 254 QGLERLLRDAIVYGQPKTHRPWKKILICVEG-IYSMEGTIVD----LPEVVALKKKYKAYLYLDEAHSIGAMGATG-RGV 327 (519)
T ss_pred HHHHHHHHHHHhcCCCCcCCcchheeeeecc-ceeccCeecc----cHHHHHhhccccEEEEeeccccccccCCCC-cce
Confidence 8999998875 22456788899 9999999988 89999999999999999999992 2 2333 345
Q ss_pred cccCCCCC---cee--eeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh----
Q psy14484 257 CEHAEIWP---DFL--CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK---- 327 (430)
Q Consensus 257 ~~~~~~~~---d~~--~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~---- 327 (430)
.+.+++.| |++ +|.|+++.+ -|++.+++++.+.+.. ......+.++. +|+.+.-....+..+..
T Consensus 328 ce~~g~d~~dvDImMGtftKSfga~---GGyiagsk~lid~lrt--~s~~~~yat~~--sppvaqq~~ssl~~i~G~dgt 400 (519)
T KOG1357|consen 328 CEYFGVDPEDVDIMMGTFTKSFGAA---GGYIAGSKELIDYLRT--PSPSALYATSL--SPPVAQQILTSVKHIMGEDGT 400 (519)
T ss_pred eeccCCCchhheeecceehhhcccc---cceecCcHHHHhhhcc--CCCceeecccC--ChHHHHHHHHHHHhhcCCCcc
Confidence 56666653 443 788988753 2678999999988775 22222233222 33333344455554432
Q ss_pred ---cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecc-eEEEEEEeecCCccchhHHHHHHHHHHHCCcEEee--cC---
Q psy14484 328 ---DNILQRISQDMKKITKALTSLITHPKIINFRQKG-MIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP--IG--- 398 (430)
Q Consensus 328 ---~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~--~~--- 398 (430)
....++++++..+|+..|+.. ..+..-.... .+..+-.. .. + -..+.+.|+++++.+.. .+
T Consensus 401 ~~g~~k~~~l~~ns~yfr~~l~~~---gfivyG~~dSpVvplll~~-~~---k---~~~f~r~~l~~nigvVvvgfPatp 470 (519)
T KOG1357|consen 401 NRGRQKIERLAENSRYFRWELQKM---GFIVYGNNDSPVVPLLLYG-PA---K---IVAFSREMLERNIGVVVVGFPATP 470 (519)
T ss_pred cHHHHHHHHHHhhhHHHHHhhhcC---cEEEecCCCCCcceeeecC-cc---c---ccHHHHHHHhcCceEEEEeCCCch
Confidence 224567777888888888654 1111100000 01111111 10 1 14678888888655442 22
Q ss_pred ---CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 399 ---NTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 399 ---~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
...||+.+..++.|+++.+++.+.++=
T Consensus 471 l~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g 500 (519)
T KOG1357|consen 471 LLESRARFCLSASHTKEDLDRALEVIDRVG 500 (519)
T ss_pred HHHhHHHhhhcccccHHHHHHHHHHHhhhc
Confidence 456999999999999999999987753
No 318
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.64 E-value=6.9e-14 Score=136.15 Aligned_cols=164 Identities=15% Similarity=0.119 Sum_probs=116.5
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
+...+....|++.++++.+ .+..++++||+.|+..++..+.. ++++|++.++.|++.......
T Consensus 60 r~~~p~~~~Le~~lA~leg--~~~al~~~sG~~Ai~~al~~ll~--------~GD~Vlv~~~~y~~t~~~~~~------- 122 (431)
T PRK08248 60 RIMNPTTDVFEKRIAALEG--GIGALAVSSGQAAITYSILNIAS--------AGDEIVSSSSLYGGTYNLFAH------- 122 (431)
T ss_pred CCCCchHHHHHHHHHHHhC--CCcEEEECCHHHHHHHHHHHHhC--------CCCEEEEccCchhhHHHHHHH-------
Confidence 4556778899999999984 56889999999999999987654 667899988888765322111
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
.......++.+++.. |+++++++++ +++++|+++. ++|++|.+.+ +++|.++|
T Consensus 123 --~~~~~Gv~v~~vd~~-----------------d~e~l~~ai~---~~tklV~l~s-p~NPtG~v~d----i~~I~~la 175 (431)
T PRK08248 123 --TLPKLGITVKFVDPS-----------------DPENFEAAIT---DKTKALFAET-IGNPKGDVLD----IEAVAAIA 175 (431)
T ss_pred --HHHhCCEEEEEECCC-----------------CHHHHHHhcC---CCCeEEEEEC-CCCCCCcccC----HHHHHHHH
Confidence 011112233444332 7788988885 4688888988 8899998877 89999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCceee--eecccCCCccccEEEEEc
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGGYLPLSLVMTT 286 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~--~sK~l~gG~~~ig~~~~~ 286 (430)
+++|+++|+|++++ .+.. ........|+++ ++|.++|...++|+++..
T Consensus 176 ~~~gi~vIvD~t~a-~~~~-----~~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~~ 225 (431)
T PRK08248 176 HEHGIPLIVDNTFA-SPYL-----LRPIEHGADIVVHSATKFIGGHGTSIGGVIVD 225 (431)
T ss_pred HHcCCEEEEeCCCC-cccc-----CChhHcCCCEEEEcCccccCCCCCceEEEEEe
Confidence 99999999999975 1111 111133467764 569998843678877663
No 319
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.63 E-value=6.9e-13 Score=129.55 Aligned_cols=300 Identities=16% Similarity=0.149 Sum_probs=174.2
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhh-hhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhh
Q psy14484 77 KPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYW-YNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEI 155 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~-~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~ 155 (430)
+...++++.+++.++ .+++++++||++|+..|+.++.... ...+..+++.||+..++|.+........+.
T Consensus 63 ~~~~~fe~~lA~~~g--~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~------- 133 (438)
T PRK15407 63 RFNDAFEKKLAEFLG--VRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGL------- 133 (438)
T ss_pred hhHHHHHHHHHHHhC--CCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCC-------
Confidence 446788899999984 4689999999999999998764210 001112568899999898765433322211
Q ss_pred hhccCCCeeEeCCC-CCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHh
Q psy14484 156 YTSLLNKTYIITTP-DSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNN 234 (430)
Q Consensus 156 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~ 234 (430)
..++++.. ..+.. |++++++.+. +++++|++.+ +. |... .+++|.++|++
T Consensus 134 ------~pv~vdvd~~~~~i------------d~~~le~~i~---~~tkaVi~~~-~~---G~p~----dl~~I~~la~~ 184 (438)
T PRK15407 134 ------VPVFVDVELPTYNI------------DASLLEAAVS---PKTKAIMIAH-TL---GNPF----DLAAVKAFCDK 184 (438)
T ss_pred ------EEEEEecCCCcCCc------------CHHHHHHHcC---cCCeEEEEeC-CC---CChh----hHHHHHHHHHH
Confidence 22333332 11222 7889998885 5678888876 42 3233 38999999999
Q ss_pred cCCEEEEeccccCCCC--cccccccccCCCCCceeeee----cccCCCccccEEEEEcH-HHHHhhh---ccCCcc----
Q psy14484 235 YNIHLIADEIAVGCGR--TGKFFACEHAEIWPDFLCLS----KGITGGYLPLSLVMTTD-KIYNSIY---YKNNIN---- 300 (430)
Q Consensus 235 ~gi~li~DEv~~g~g~--~g~~~~~~~~~~~~d~~~~s----K~l~gG~~~ig~~~~~~-~~~~~~~---~~~~~~---- 300 (430)
+|+++|+|++|+ +|- .|.. .|-.-|+.+|| |.++.| .-|+++.+. ++.+.+. ..+...
T Consensus 185 ~gi~vIeDaa~a-~G~~~~g~~-----~G~~gd~~~fSf~~~k~~~~g--eGG~l~t~d~~l~~~~~~~~~~G~~~~~~~ 256 (438)
T PRK15407 185 HNLWLIEDNCDA-LGSTYDGRM-----TGTFGDIATLSFYPAHHITMG--EGGAVFTNDPLLKKIIESFRDWGRDCWCAP 256 (438)
T ss_pred CCCEEEEECccc-hhhhcCCee-----eeccCceEEEeCCCCCCcccc--CceEEEECCHHHHHHHHHHHHhCccccccc
Confidence 999999999997 432 2221 12223777766 667655 247888764 4433322 111100
Q ss_pred ---------------------c--c---cccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhc-CCC
Q psy14484 301 ---------------------I--F---LHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-HPK 353 (430)
Q Consensus 301 ---------------------~--~---~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~-~~~ 353 (430)
. + ..+..+..+.+.++.++.-|+.+ ++..++-+++.+++.+.|..+.. ...
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~~l--~~~~~~R~~~a~~y~~~L~~~~~~~~~ 334 (438)
T PRK15407 257 GCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLEKL--PGFIEARKANFAYLKEGLASLEDFLIL 334 (438)
T ss_pred ccccccccccccccccccccccccccccccccccCccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhccCCCcccc
Confidence 0 0 01222334556566666666644 44667777788888888876521 111
Q ss_pred eeeEee-cceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEee-----c------------------------CCEEEE
Q psy14484 354 IINFRQ-KGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP-----I------------------------GNTVYL 403 (430)
Q Consensus 354 ~~~~~~-~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~-----~------------------------~~~lR~ 403 (430)
.....+ ...++.+.+.-....... .+++.+.|.++||-... . ...+.+
T Consensus 335 ~~~~~~~~~~~~~~~i~~~~~~~~~--Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~L 412 (438)
T PRK15407 335 PEATPNSDPSWFGFPITVKEDAGFT--RVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWI 412 (438)
T ss_pred CcCCCCCeeEEEEEEEEECCcCCCC--HHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEe
Confidence 110111 122223322201111011 26799999999985431 0 122444
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 404 MPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 404 ~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
-++...++++++.+++.|++++.
T Consensus 413 P~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 413 GVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHh
Confidence 44455699999999999998875
No 320
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.62 E-value=1.6e-13 Score=132.66 Aligned_cols=162 Identities=14% Similarity=0.151 Sum_probs=114.8
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccch
Q psy14484 74 LTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFK 153 (430)
Q Consensus 74 ~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~ 153 (430)
...+...+|++.++++.+ .+.++.++||+.|+.+++..+.. +++.||+..+.|.+.......
T Consensus 58 ~~nPtv~~lE~~la~leg--~~~av~~~SG~aAi~~al~all~--------~GD~VI~~~~~Y~~T~~~~~~-------- 119 (432)
T PRK06702 58 IGNPTLAAFEQKLAELEG--GVGAVATASGQAAIMLAVLNICS--------SGDHLLCSSTVYGGTFNLFGV-------- 119 (432)
T ss_pred CCCcHHHHHHHHHHHHhC--CCcEEEECCHHHHHHHHHHHhcC--------CCCEEEECCCchHHHHHHHHH--------
Confidence 345778899999999984 45688899999999999987654 678999999999765322111
Q ss_pred hhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHH
Q psy14484 154 EIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICN 233 (430)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~ 233 (430)
....+..++.++.... |+++++++++ +++++|++|. +.|+.+.+.. +++|.++|+
T Consensus 120 -~l~~~Gi~v~~vd~~~----------------d~~~l~~~I~---~~Tk~I~~e~-pgnP~~~v~D----i~~I~~iA~ 174 (432)
T PRK06702 120 -SLRKLGIDVTFFNPNL----------------TADEIVALAN---DKTKLVYAES-LGNPAMNVLN----FKEFSDAAK 174 (432)
T ss_pred -HHHHCCCEEEEECCCC----------------CHHHHHHhCC---cCCeEEEEEc-CCCccccccC----HHHHHHHHH
Confidence 1111223344443311 7789999996 5788999999 8888886766 999999999
Q ss_pred hcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCCccccEEEE
Q psy14484 234 NYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPLSLVM 284 (430)
Q Consensus 234 ~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~~~ig~~~ 284 (430)
++|+++|+|+++. .+..+..+....|++ +++|.++|..--+|.++
T Consensus 175 ~~gi~livD~T~~------tP~~~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v 221 (432)
T PRK06702 175 ELEVPFIVDNTLA------TPYLCQAFEHGANIIVHSTTKYIDGHASSLGGIV 221 (432)
T ss_pred HcCCEEEEECCCC------chhhCChhhcCCCEEEEccccccCCCcceeceEE
Confidence 9999999999863 223334344456665 67898887323444433
No 321
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.62 E-value=1.1e-12 Score=129.96 Aligned_cols=315 Identities=13% Similarity=0.067 Sum_probs=179.0
Q ss_pred CCHHHHHHHHHHHhhcCCC-----------C--CeEEEcCCchHHHHHHHHHHHHhhhhc-CC----------------C
Q psy14484 75 THKPVIKLSEKLSSLTQYK-----------L--GHCFYGSDGASAVEVALKMSFHYWYNK-GF----------------L 124 (430)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~-----------~--~~v~~~~sgteA~~~al~~~~~~~~~~-g~----------------~ 124 (430)
.++....+.+++++++... + ..-.|++|||+||..|+.++|...... |. .
T Consensus 127 ~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~ 206 (522)
T TIGR03799 127 FTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYG 206 (522)
T ss_pred hHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhcc
Confidence 3466677778888776311 1 235789999999999999999753211 00 0
Q ss_pred CCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhC---CCC
Q psy14484 125 NKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKN---HNK 201 (430)
Q Consensus 125 ~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~ 201 (430)
.++.+|..+..-|-+..-+....+. -...++.++.+...+. |+++|++.+++. ...
T Consensus 207 ~~~~~v~~S~~~H~S~~kaa~~lgl---------g~~~v~~vp~d~~g~~------------d~~~L~~~i~~~~~~g~~ 265 (522)
T TIGR03799 207 YDGLAILVSERGHYSLGKAADVLGI---------GRDNLIAIKTDANNRI------------DVDALRDKCAELAEQNIK 265 (522)
T ss_pred CCceEEEECCCchHHHHHHHHHcCC---------CcccEEEEEeCCCCcC------------CHHHHHHHHHHHHHCCCC
Confidence 1233555555666553322221110 0113455666554444 899999988642 223
Q ss_pred eEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCC-CCceeeee--cccCCCcc
Q psy14484 202 IAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI-WPDFLCLS--KGITGGYL 278 (430)
Q Consensus 202 ~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~-~~d~~~~s--K~l~gG~~ 278 (430)
+.+|+... ..+++|.+.| +++|.++|+++|+++++|.+|.|....-..+.....++ ..|.++++ |.+.+. .
T Consensus 266 ~~~vvata-Gtt~tGaiDp----l~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P-~ 339 (522)
T TIGR03799 266 PLAIVGVA-GTTETGNIDP----LDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVP-M 339 (522)
T ss_pred cEEEEEEe-cCcCCCCcCC----HHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcC-c
Confidence 45555555 6668899999 99999999999999999999975421111000112344 57999888 766654 5
Q ss_pred ccEEEEEcH-HHHHhhhcc------CCcccccccCCCCCC-HHHHHHHHHHHHHHhhcC---HHHHHHHHHHHHHHHHHc
Q psy14484 279 PLSLVMTTD-KIYNSIYYK------NNINIFLHSHSYSGN-PLACCAALATLEIFNKDN---ILQRISQDMKKITKALTS 347 (430)
Q Consensus 279 ~ig~~~~~~-~~~~~~~~~------~~~~~~~~~~t~~~~-~~~~~aa~~~l~~~~~~~---~~~~~~~~~~~l~~~l~~ 347 (430)
.+|+++.+. .+.+.+... .....+ ...++.+. +......+.+|+.+.... +.++..+++++|.+.|++
T Consensus 340 g~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~-~~~~legsR~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~ 418 (522)
T TIGR03799 340 GAGMVLFKDPALMSAIEHHAEYILRKGSKDL-GSHTLEGSRPGMAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQ 418 (522)
T ss_pred ccEEEEEeCHHHHHHhccCcchhcCCCCCcc-ccceeecCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 789998874 444443320 000000 00112121 122234567777665544 445566778888887765
Q ss_pred hhcCCCeeeEeecceEEEEEEeecCCc-----------------cchhHHHHHHHHHHHCCcEEee-c--------C---
Q psy14484 348 LITHPKIINFRQKGMIWAFDVIIEDPE-----------------QIETFSKKFFVAALKNELLLRP-I--------G--- 398 (430)
Q Consensus 348 l~~~~~~~~~~~~g~~~~~~~~~~~~~-----------------~~~~~a~~~~~~l~~~Gv~~~~-~--------~--- 398 (430)
..++..+. ++.-.+++|.+. +... ....+..++.+++.+.|..... . +
T Consensus 419 ~~~~el~~--~p~l~iv~Fr~~-p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~ 495 (522)
T TIGR03799 419 QPDFELVT--EPELCLLTYRYV-PEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPT 495 (522)
T ss_pred CCCeEEec--CCCccEEEEEEe-ChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCc
Confidence 53322221 222334555543 2110 0112235677778888876543 1 1
Q ss_pred CEEEEeC-CCCCCHHHHHHHHHH
Q psy14484 399 NTVYLMP-PYILNKNEIQHMTSA 420 (430)
Q Consensus 399 ~~lR~~~-~~~~t~e~i~~~~~~ 420 (430)
..+|+++ +..+|+++|+.+++.
T Consensus 496 ~~lR~~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 496 VVFRVVLANPLTTHEILQDILDE 518 (522)
T ss_pred EEEEEEecCCCCCHHHHHHHHHH
Confidence 2588766 556788999887754
No 322
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.62 E-value=9e-14 Score=132.93 Aligned_cols=316 Identities=8% Similarity=0.019 Sum_probs=183.0
Q ss_pred CCHHHHHHHHHHHhhcccccc--CCCC------CHHHHHHHHHHHhhcCC-CCCeEEEcCC-chHHHHHHHHHHHHhhhh
Q psy14484 51 SNSYINKALKNQLNKLEHVML--SNLT------HKPVIKLSEKLSSLTQY-KLGHCFYGSD-GASAVEVALKMSFHYWYN 120 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~~~~~~~--~~~~------~~~~~~l~~~l~~~~~~-~~~~v~~~~s-gteA~~~al~~~~~~~~~ 120 (430)
-+++|++|+.+.+........ .... ....++.++.++++++. ..++|+|++| +|+|++.++..+...
T Consensus 10 ~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~~--- 86 (355)
T cd00611 10 LPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLGD--- 86 (355)
T ss_pred CCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCC---
Confidence 478999999998755321111 0111 15667888999999975 4567999977 999999998877421
Q ss_pred cCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHH-HHHHHHHHHhCC
Q psy14484 121 KGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCA-IFDLEILLKKNH 199 (430)
Q Consensus 121 ~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~le~~l~~~~ 199 (430)
+ .+..+|+ .+.|..+..... .....+...++.+...... + .+..+..+ .
T Consensus 87 -~--~~~~~i~-~g~~~~~~~~~a------------~~~g~~~~~~~~~~~g~~~-----------~~~~~~~~~~---~ 136 (355)
T cd00611 87 -K--GTADYVV-TGAWSAKAAKEA------------KRYGGVVVIVAAKEEGKYT-----------KIPDVETWDL---A 136 (355)
T ss_pred -C--CeEEEEE-CCHHHHHHHHHH------------HhcCCCcEEEecccccCCC-----------CCCCHhhcCC---C
Confidence 1 1222222 222211110000 0111233444443211000 1 11111223 2
Q ss_pred CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeeecccCCCccc
Q psy14484 200 NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLP 279 (430)
Q Consensus 200 ~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ 279 (430)
+++++|.+.. +.+.+|...+ ++++.||+++++|.+|+ +|.. ...++.++ .++.+--|.+|. ..
T Consensus 137 ~~~~lV~~~h-~~t~tG~~~~---------~i~~~~g~~~~VDa~qs-~g~~--~idv~~~~--~~~ss~~K~lGP--~G 199 (355)
T cd00611 137 PDAAYVHYCS-NETIHGVEFD---------EVPDTGGVPLVADMSSN-ILSR--PIDVSKFG--VIYAGAQKNLGP--AG 199 (355)
T ss_pred CCCCEEEEeC-CcccccEEcc---------eecccCCCeEEEEcccc-ccCC--CCCHHHhC--EEEeecccccCC--Cc
Confidence 4678888888 8888886633 45566999999999998 5322 23333333 222223486642 45
Q ss_pred cEEEEEcHHHHHhhhccCCccccc-------ccC-CCCCCHHHHHHHHHHHHHHhhc----CHHHHHHHHHHHHHHHHHc
Q psy14484 280 LSLVMTTDKIYNSIYYKNNINIFL-------HSH-SYSGNPLACCAALATLEIFNKD----NILQRISQDMKKITKALTS 347 (430)
Q Consensus 280 ig~~~~~~~~~~~~~~~~~~~~~~-------~~~-t~~~~~~~~~aa~~~l~~~~~~----~~~~~~~~~~~~l~~~l~~ 347 (430)
+|.+++++++.+.+.+. ..... ... ..++|.....+..++|+.+++. +..++.+++.+++++.|++
T Consensus 200 ~g~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~ 277 (355)
T cd00611 200 VTVVIVRKDLLGKARKI--TPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDN 277 (355)
T ss_pred eEEEEECHHHHhhcccC--CCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999988765431 00010 111 1244555666777888877654 3456667888888888887
Q ss_pred hhcCC-CeeeE-eecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec---CCEEEEeCCCCCCHHHHHHHHHHHH
Q psy14484 348 LITHP-KIINF-RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI---GNTVYLMPPYILNKNEIQHMTSAIF 422 (430)
Q Consensus 348 l~~~~-~~~~~-~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~---~~~lR~~~~~~~t~e~i~~~~~~l~ 422 (430)
+.++. ..... ...+.++.|... .. .+...+.+.+.++|+...++ .+.+|+++..++|++||+.++++|+
T Consensus 278 ~~gl~~~~~~~~~rs~~vvsf~~~-~~-----~l~~~~~~~~~r~G~~~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~ 351 (355)
T cd00611 278 SNGFYRGPVDKRARSRMNVPFRLG-KE-----ELEKEFLKEAEAAGMIGLKGHRSVGGIRASIYNALSLEGVQALADFMK 351 (355)
T ss_pred CccccccCCCHHHcCceEEEEEcC-Ch-----hhhHHHHHHHHHCCCcccCCCcccCeEEEEccCCCCHHHHHHHHHHHH
Confidence 73321 11111 112245666655 31 11245556788899984443 2689999999999999999999998
Q ss_pred HH
Q psy14484 423 QT 424 (430)
Q Consensus 423 ~~ 424 (430)
++
T Consensus 352 ~~ 353 (355)
T cd00611 352 EF 353 (355)
T ss_pred HH
Confidence 74
No 323
>PLN02590 probable tyrosine decarboxylase
Probab=99.61 E-value=3.3e-12 Score=126.40 Aligned_cols=324 Identities=12% Similarity=0.057 Sum_probs=188.5
Q ss_pred CCHHHHHHHHHHHhhcCCCC-------CeEEEcCCchHHHHHHHHHHHHhhhhc-CCCCCcE-EEEEcCCCCCcchhhhc
Q psy14484 75 THKPVIKLSEKLSSLTQYKL-------GHCFYGSDGASAVEVALKMSFHYWYNK-GFLNKKK-FICLQNSYHGETLGALA 145 (430)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~-------~~v~~~~sgteA~~~al~~~~~~~~~~-g~~~~~~-vl~~~~~yhg~~~~~~~ 145 (430)
..+....+.++++++++.+. ..-+|++||||||..|+.++|.....+ |..+..+ ++..+..-|-+..=++.
T Consensus 168 ~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ 247 (539)
T PLN02590 168 ATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACL 247 (539)
T ss_pred hHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHH
Confidence 34666778889999986332 236789999999999999998754321 2222222 33334344433222222
Q ss_pred cCCCccchhhhhccCCCeeEeCCCC--CCCCCCCCChhHHHHHHHHHHHHHHHhC---CCCeEEEEEccccccCCCcccC
Q psy14484 146 VTNIQSFKEIYTSLLNKTYIITTPD--SRNINKGNSANEIARCAIFDLEILLKKN---HNKIAAIIIEPLVQCAGGMIMY 220 (430)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~~~vi~ep~v~~~~G~~~~ 220 (430)
+.+-. ...++.++.+. .++. |+++|+++|.+. ...+.+|+..- ...++|.+.|
T Consensus 248 ilGlg---------~~~vr~Vp~d~~~~~~m------------d~~~L~~~I~~d~~~g~~P~~VvaTa-GTT~tGaiDp 305 (539)
T PLN02590 248 IGGIH---------EENIRLLKTDSSTNYGM------------PPESLEEAISHDLAKGFIPFFICATV-GTTSSAAVDP 305 (539)
T ss_pred HcCCC---------cccEEEEeCCCCCCCcC------------CHHHHHHHHHHHHhcCCCcEEEEEEe-CCCCCcccCC
Confidence 22110 11235555552 2233 899999999753 23456666666 7777898888
Q ss_pred ChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCC-CCceeeee--cccCCCccccEEEEEcHH--HHHhhhc
Q psy14484 221 DSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI-WPDFLCLS--KGITGGYLPLSLVMTTDK--IYNSIYY 295 (430)
Q Consensus 221 ~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~-~~d~~~~s--K~l~gG~~~ig~~~~~~~--~~~~~~~ 295 (430)
+++|.++|++||++||||.++.|+...-.....-..++ ..|=+++. |.+.-. ++.|+++++.. +.+.+..
T Consensus 306 ----l~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p-~~cg~llvr~~~~l~~a~~~ 380 (539)
T PLN02590 306 ----LVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFAN-QTCSPLWVKDRYSLIDALKT 380 (539)
T ss_pred ----HHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcC-cCEEEEEecCHHHHHHHhhc
Confidence 99999999999999999999987642211110011233 25655544 777666 58888888853 2222211
Q ss_pred c------CC--c---ccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHH---HHHHHHHHHHHHchhcCCCeeeEeecc
Q psy14484 296 K------NN--I---NIFLHSHSYSGNPLACCAALATLEIFNKDNILQRI---SQDMKKITKALTSLITHPKIINFRQKG 361 (430)
Q Consensus 296 ~------~~--~---~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~---~~~~~~l~~~l~~l~~~~~~~~~~~~g 361 (430)
. .. . ..+...+--.+-.+.....+.+|+.+..+.+.+.+ -+++++|.+.|++...+..+. ++.=
T Consensus 381 ~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~--~~~l 458 (539)
T PLN02590 381 NPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVT--TRYF 458 (539)
T ss_pred CHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec--CCce
Confidence 0 00 0 00001111112234556667777776666665555 456777777776542222221 2233
Q ss_pred eEEEEEEeecCCcc---chhHHHHHHHHHHHCCcEEee-c---C-CEEEEeC-CCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 362 MIWAFDVIIEDPEQ---IETFSKKFFVAALKNELLLRP-I---G-NTVYLMP-PYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 362 ~~~~~~~~~~~~~~---~~~~a~~~~~~l~~~Gv~~~~-~---~-~~lR~~~-~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.+++|.+. +.... ...+..++.+++.+.|.+... . + .++|+++ +..+++++|+.+++.|.+...++
T Consensus 459 ~iVcFr~~-~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~ 533 (539)
T PLN02590 459 SLVCFRLA-PVDGDEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKF 533 (539)
T ss_pred EEEEEEec-CCCCCHHHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Confidence 34455554 31111 123346788888888765443 2 2 4789776 55678999999999999887654
No 324
>PLN02509 cystathionine beta-lyase
Probab=99.61 E-value=2.5e-13 Score=132.51 Aligned_cols=284 Identities=14% Similarity=0.184 Sum_probs=169.3
Q ss_pred CCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchh
Q psy14484 75 THKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKE 154 (430)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~ 154 (430)
..+..++++++++++. +.+.+++++||+.|+..++. +.. +++.||+.++.|++........
T Consensus 131 gnpt~~aLE~~lA~le--g~e~ai~~~SG~aAi~~il~-ll~--------~GD~VI~~~~~y~~t~~ll~~~-------- 191 (464)
T PLN02509 131 GNPTRDALESLLAKLD--KADRAFCFTSGMAALSAVTH-LIK--------NGEEIVAGDDVYGGSDRLLSQV-------- 191 (464)
T ss_pred CCHHHHHHHHHHHHHh--CCCEEEEeCcHHHHHHHHHH-HhC--------CCCEEEEcCCchhhHHHHHHHH--------
Confidence 4577899999999998 55677888999988765553 332 6678999999987653211110
Q ss_pred hhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHh
Q psy14484 155 IYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNN 234 (430)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~ 234 (430)
.........+++.. |++++++++. +++++|++|. ++|++|.+.+ +++|.++|++
T Consensus 192 -l~~~G~~v~~vd~~-----------------d~e~l~~ai~---~~TklV~les-PsNPtG~i~D----l~~I~~lAk~ 245 (464)
T PLN02509 192 -VPRSGVVVKRVNTT-----------------NLDEVAAAIG---PQTKLVWLES-PTNPRQQISD----IRKIAEMAHA 245 (464)
T ss_pred -HHHCCeEEEEeCCC-----------------CHHHHHHhCC---cCCeEEEEEC-CCCCCCCHHH----HHHHHHHHHH
Confidence 00011122233221 6788888884 5688999999 9999997766 9999999999
Q ss_pred cCCEEEEeccccCCCCcccccccccCCCCCceee--eecccCC-CccccEEEEEcH-HHHHhhhccCCcccccccCCCCC
Q psy14484 235 YNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITG-GYLPLSLVMTTD-KIYNSIYYKNNINIFLHSHSYSG 310 (430)
Q Consensus 235 ~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~--~sK~l~g-G~~~ig~~~~~~-~~~~~~~~~~~~~~~~~~~t~~~ 310 (430)
+|+++|+||++. .+..+. ..+...|+++ ++|.++| |..-.|+++++. .+.+.+.. .........
T Consensus 246 ~g~~lIVD~A~a-~~~~~~-----pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~------~~~~~g~~l 313 (464)
T PLN02509 246 QGALVLVDNSIM-SPVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYF------LQNSEGSGL 313 (464)
T ss_pred cCCEEEEECCcc-ccccCC-----hhhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHH------HHHhcCCCc
Confidence 999999999985 222222 1233467764 5699987 322245666544 33333221 001111123
Q ss_pred CHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhc-----CCCee----------eEeecceEEEEEEeecCCcc
Q psy14484 311 NPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-----HPKII----------NFRQKGMIWAFDVIIEDPEQ 375 (430)
Q Consensus 311 ~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~-----~~~~~----------~~~~~g~~~~~~~~~~~~~~ 375 (430)
++..+..+...|+.+. ...++..++++++.+.|++.+. +|++. ...+-|.++.|++. +
T Consensus 314 ~p~~A~l~lr~L~tL~--~R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~-~---- 386 (464)
T PLN02509 314 APFDCWLCLRGIKTMA--LRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITG-S---- 386 (464)
T ss_pred CHHHHHHHHhhhhhHH--HHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeC-C----
Confidence 5565555555565442 3456666777777777765321 22211 13456888888775 3
Q ss_pred chhHHHHHHHHHH--HCC--------cEEee------------------cCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 376 IETFSKKFFVAAL--KNE--------LLLRP------------------IGNTVYLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 376 ~~~~a~~~~~~l~--~~G--------v~~~~------------------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
.+.+.+|.+.|. ..+ ++..| ..+.+|+++.+. +.+.+++.|+++|+.
T Consensus 387 -~~~~~~f~~~l~l~~~a~slG~~~SLi~~p~~~sh~~~~~~~~~~~Gi~~~liRlSvGlE----~~~DLi~Dl~~Al~~ 461 (464)
T PLN02509 387 -VALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGIE----DVDDLISDLDIAFRT 461 (464)
T ss_pred -HHHHHHHHHcCCcceEcccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccC----CHHHHHHHHHHHHcc
Confidence 122455666553 111 11111 125789976644 566677777777653
No 325
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.61 E-value=4.6e-13 Score=128.52 Aligned_cols=310 Identities=17% Similarity=0.149 Sum_probs=181.9
Q ss_pred HHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEc
Q psy14484 54 YINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQ 133 (430)
Q Consensus 54 ~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~ 133 (430)
+..+++.+.++.... ....+...++++.+++.+ +.++++.++|||.|+.+|++++--. +++.|++..
T Consensus 6 e~~~~v~~~l~s~~~----~~~g~~~~~fE~~~a~~~--g~~~~~~~~sgt~Al~~al~~l~~~-------~gdeVi~p~ 72 (363)
T PF01041_consen 6 EEIDAVLEVLRSGWL----STYGPYVEEFEKEFAEYF--GVKYAVAVSSGTSALHLALRALGLG-------PGDEVIVPA 72 (363)
T ss_dssp HHHHHHHHHHHHTCC----SSSSHHHHHHHHHHHHHH--TSSEEEEESSHHHHHHHHHHHTTGG-------TTSEEEEES
T ss_pred HHHHHHHHHHHhCCc----cCCCHHHHHHHHHHHHHh--CCCeEEEeCChhHHHHHHHHhcCCC-------cCceEecCC
Confidence 455666666655321 222577789999999999 6789999999999999999985432 678899988
Q ss_pred CCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC-CCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccc
Q psy14484 134 NSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP-DSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQ 212 (430)
Q Consensus 134 ~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~ 212 (430)
-+|+.........+. ..+++.+. ++... |++.+++.+. +++++|++.+ ..
T Consensus 73 ~t~~~~~~ai~~~G~-------------~pv~~Di~~~~~~i------------d~~~~~~~i~---~~t~ai~~~h-~~ 123 (363)
T PF01041_consen 73 YTFPATASAILWAGA-------------EPVFVDIDPETLNI------------DPEALEKAIT---PKTKAILVVH-LF 123 (363)
T ss_dssp SS-THHHHHHHHTT--------------EEEEE-BETTTSSB-------------HHHHHHHHH---TTEEEEEEE--GG
T ss_pred CcchHHHHHHHHhcc-------------EEEEEeccCCcCCc------------CHHHHHHHhc---cCccEEEEec-CC
Confidence 777765444333332 22445443 33333 8999999997 5678888766 43
Q ss_pred cCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeee----cccCCCccccEEEEEcH-
Q psy14484 213 CAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS----KGITGGYLPLSLVMTTD- 287 (430)
Q Consensus 213 ~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s----K~l~gG~~~ig~~~~~~- 287 (430)
|.... +.+|.++|+++|++||.|.+|+ +|-. +.-...|-.-|+.+|| |.++.| --|+++.+.
T Consensus 124 ---G~~~d----~~~i~~~~~~~~i~lIeD~a~a-~g~~---~~g~~~G~~gd~~~fSf~~~K~i~~g--eGG~v~~~~~ 190 (363)
T PF01041_consen 124 ---GNPAD----MDAIRAIARKHGIPLIEDAAQA-FGAR---YKGRPVGSFGDIAIFSFHPTKIITTG--EGGAVVTNDP 190 (363)
T ss_dssp ---GB-------HHHHHHHHHHTT-EEEEE-TTT-TT-E---ETTEETTSSSSEEEEESSTTSSS-SS--S-EEEEESTH
T ss_pred ---CCccc----HHHHHHHHHHcCCcEEEccccc-cCce---eCCEeccCCCCceEecCCCCCCCcCC--CCeeEEecHH
Confidence 32333 9999999999999999999998 4321 1112233345888777 888654 247788864
Q ss_pred HHHHhh---hccCCc----cccc----ccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcCCCeee
Q psy14484 288 KIYNSI---YYKNNI----NIFL----HSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIIN 356 (430)
Q Consensus 288 ~~~~~~---~~~~~~----~~~~----~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 356 (430)
++.+.+ ...+.. .... .+..+..+.+.++.++.-|+.+ +...++-+++.+++.+.|..+.....+..
T Consensus 191 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~L--~~~~~~R~~~a~~y~~~L~~~~~~~~~~~ 268 (363)
T PF01041_consen 191 ELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLKRL--DEIIARRRENAQRYREALAGIPGIKPPPI 268 (363)
T ss_dssp HHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHTTGTTEEEEGC
T ss_pred HHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHhcCCCcccccc
Confidence 544443 221111 1111 1233444556555555555533 34566667778888888876632101111
Q ss_pred Eeec--ceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-----------------------------CCEEEEeC
Q psy14484 357 FRQK--GMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----------------------------GNTVYLMP 405 (430)
Q Consensus 357 ~~~~--g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-----------------------------~~~lR~~~ 405 (430)
.... ..++.+.+.-++..... .+.+.+.|.++||-..+. ...+.+-.
T Consensus 269 ~~~~~~~~~~~f~i~~~~~~~~~--rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~ 346 (363)
T PF01041_consen 269 PDGAERSSYYRFPIRLPDEALAD--RDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPI 346 (363)
T ss_dssp GTTTEEBCESSEEEEETCCGCST--HHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEH
T ss_pred cccccccccccccccccccccch--HHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcC
Confidence 1111 22322322201111011 368999999999987641 13566777
Q ss_pred CCCCCHHHHHHHHHHHH
Q psy14484 406 PYILNKNEIQHMTSAIF 422 (430)
Q Consensus 406 ~~~~t~e~i~~~~~~l~ 422 (430)
+...++++++.+++.|+
T Consensus 347 ~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 347 HPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp STTSCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHhhccC
Confidence 77789999999998875
No 326
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.60 E-value=1.9e-13 Score=133.07 Aligned_cols=163 Identities=14% Similarity=0.114 Sum_probs=114.8
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
+...+...++++.++++.+ .+.+++++||++|+..++..+.. +++.||+.+..|++.......
T Consensus 60 R~~~p~~~~le~~lA~l~g--~~~av~~sSGt~Al~~al~~ll~--------~Gd~Vi~~~~~y~~t~~~~~~------- 122 (433)
T PRK08134 60 RISNPTVAVLEERVAALEG--GVGAIATASGQAALHLAIATLMG--------AGSHIVASSALYGGSHNLLHY------- 122 (433)
T ss_pred cCcChHHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHHhC--------CCCEEEEeCCccHHHHHHHHH-------
Confidence 4556788999999999985 34589999999999999887643 567888888888754221110
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
.......++.+++.. |+++++++++ +++++|+++. +.|++|.+.+ +++|.++|
T Consensus 123 --~l~~~Gi~v~~vd~~-----------------d~~~l~~~i~---~~TklV~~e~-~~np~g~v~D----i~~I~~la 175 (433)
T PRK08134 123 --TLRRFGIETTFVKPG-----------------DIDGWRAAIR---PNTRLLFGET-LGNPGLEVLD----IPTVAAIA 175 (433)
T ss_pred --HHhhCCeEEEEECCC-----------------CHHHHHHhcC---CCCeEEEEEC-CCcccCcccC----HHHHHHHH
Confidence 001112233444432 6889999885 5789999999 9999998888 99999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCceeeee--cccCCCccccEEEEE
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITGGYLPLSLVMT 285 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s--K~l~gG~~~ig~~~~ 285 (430)
+++|+++|+|.+|+ .+.. ........|++++| |.++|..-.+|.++.
T Consensus 176 ~~~gi~livD~t~a-~~~~-----~~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 176 HEAGVPLLVDSTFT-TPYL-----LRPFEHGADLVYHSATKFLGGHGTAIGGVLV 224 (433)
T ss_pred HHcCCEEEEECCCc-cccc-----CCchhcCCCEEEeccccccCCCCCceEEEEE
Confidence 99999999999986 2211 11123456887665 888773234666554
No 327
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.60 E-value=2.6e-13 Score=131.96 Aligned_cols=165 Identities=13% Similarity=0.089 Sum_probs=112.6
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
+...+....|++.++++. +.+..++++||+.|+..++..+.. +++.||+....|.+........
T Consensus 65 r~~~p~~~~Le~~lA~l~--g~~~av~~sSG~aAi~~al~all~--------~Gd~Vv~~~~~y~~t~~~~~~~------ 128 (436)
T PRK07812 65 RIMNPTQDVVEQRIAALE--GGVAALLLASGQAAETFAILNLAG--------AGDHIVSSPRLYGGTYNLFHYT------ 128 (436)
T ss_pred CCCCchHHHHHHHHHHHh--CCCeEEEEccHHHHHHHHHHHHhC--------CCCEEEEeCCcchHHHHHHHHH------
Confidence 344677889999999998 456789999999999999987654 5678888877775432211110
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
......++.++..+. |+++++++++ +++++|++|. +.|+.|.+.+ +++|.++|
T Consensus 129 ---l~~~Gi~v~~vdd~~----------------d~e~l~~ai~---~~tklV~ie~-~sNp~G~v~D----l~~I~~la 181 (436)
T PRK07812 129 ---LPKLGIEVSFVEDPD----------------DLDAWRAAVR---PNTKAFFAET-ISNPQIDVLD----IPGVAEVA 181 (436)
T ss_pred ---hhcCeEEEEEECCCC----------------CHHHHHHhCC---CCCeEEEEEC-CCCCCCeecC----HHHHHHHH
Confidence 001112223332121 7888888885 5688999999 9999998888 99999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCCccccEEEEEc
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPLSLVMTT 286 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~~~ig~~~~~ 286 (430)
+++|+++|+|++++ .+.. ........|++ +++|.++|..--+|+++..
T Consensus 182 ~~~gi~liVD~t~a-~~~~-----~~pl~~GaDivv~S~tK~lgg~G~~i~G~vv~ 231 (436)
T PRK07812 182 HEAGVPLIVDNTIA-TPYL-----IRPLEHGADIVVHSATKYLGGHGTAIAGVIVD 231 (436)
T ss_pred HHcCCEEEEECCCc-cccc-----CCchhcCCCEEEEecccccCCCCCeEEEEEEc
Confidence 99999999999875 2111 11122346766 5669998732346655553
No 328
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.60 E-value=2.3e-13 Score=130.03 Aligned_cols=292 Identities=13% Similarity=0.135 Sum_probs=177.4
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCcc
Q psy14484 72 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 151 (430)
Q Consensus 72 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~ 151 (430)
.+..++....|++.|+++- +.+.+++++||+.|+..++..+.. ++++||+....|.+......
T Consensus 57 sR~~nPt~~~le~~la~LE--g~~~a~~~~SGmaAi~~~~~~ll~--------~GD~Vv~~~~~Yg~t~~l~~------- 119 (395)
T PRK08114 57 GRRGTLTHFSLQEAMCELE--GGAGCALYPCGAAAVANAILAFVE--------QGDHVLMTGTAYEPTQDFCS------- 119 (395)
T ss_pred cCCCChhHHHHHHHHHHHh--CCCeEEEEhHHHHHHHHHHHHHcC--------CCCEEEEeCCCcHHHHHHHH-------
Confidence 3566788899999999987 556888999999999998886654 56788888777766532221
Q ss_pred chhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHH
Q psy14484 152 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 231 (430)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l 231 (430)
........++.+++.. |.++++++++ +++++|++|. +.|+.|.+.+ +++|.++
T Consensus 120 --~~l~~~Gi~v~~vd~~-----------------d~~~l~~~l~---~~TrlV~~Et-psNp~~~v~D----I~~Ia~i 172 (395)
T PRK08114 120 --KILSKLGVTTTWFDPL-----------------IGADIAKLIQ---PNTKVVFLES-PGSITMEVHD----VPAIVAA 172 (395)
T ss_pred --HHHHhcCcEEEEECCC-----------------CHHHHHHhcC---CCceEEEEEC-CCCCCCEeec----HHHHHHH
Confidence 1111122333444321 6788898885 5789999999 9999998888 9999999
Q ss_pred HHhcC--CEEEEeccccCCCCcccccccccCCCCCceeeee--cccCCCc-cccEEEEEcHHHHHhhhccCCcccccccC
Q psy14484 232 CNNYN--IHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITGGY-LPLSLVMTTDKIYNSIYYKNNINIFLHSH 306 (430)
Q Consensus 232 ~~~~g--i~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s--K~l~gG~-~~ig~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (430)
|+++| +++++|.+++ . +. .++...+..|+++.| |.++|.. .-.|.++.+++..+.+.. . ....+.
T Consensus 173 a~~~g~g~~lvVDnT~a-~---p~--~~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~---~-~~~~G~ 242 (395)
T PRK08114 173 VRSVNPDAVIMIDNTWA-A---GV--LFKALDFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLRE---N-SYLMGQ 242 (395)
T ss_pred HHHhCCCCEEEEECCCc-c---cc--ccCHHHcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHH---H-HHhccC
Confidence 99984 9999999986 2 11 144445567888655 9998842 346666767766554442 0 011122
Q ss_pred CCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchh-----cCCCee----------eEeecceEEEEEEeec
Q psy14484 307 SYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKII----------NFRQKGMIWAFDVIIE 371 (430)
Q Consensus 307 t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~-----~~~~~~----------~~~~~g~~~~~~~~~~ 371 (430)
..+|..+.-....|+.+. -..++..+++..+.+.|+..+ .+|.+. ...+-|.++.|+++ .
T Consensus 243 --~~~p~~a~l~~rgl~TL~--lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~-~ 317 (395)
T PRK08114 243 --MVDADTAYMTSRGLRTLG--VRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLK-K 317 (395)
T ss_pred --CCCHHHHHHHHcCCCcHH--HHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEec-C
Confidence 224443332222222211 123444555666666665321 122211 13467889999987 4
Q ss_pred CCccchhHHHHHHHHHHH--CC--------cEE--ee--------------cCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 372 DPEQIETFSKKFFVAALK--NE--------LLL--RP--------------IGNTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 372 ~~~~~~~~a~~~~~~l~~--~G--------v~~--~~--------------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
... .+.+.+|.+.|.- .+ ++. .| .++.+|+++.+ |+.+.+++.|+++|
T Consensus 318 ~~~--~~~~~~f~~~l~l~~~a~SlGg~~SLi~~~~~~~~~~~~~~~~~~~~~~liRlSvGl----Ed~~DLi~Dl~~Al 391 (395)
T PRK08114 318 KLT--DEQLANYLDNFSLFSMAYSWGGFESLILANQPEEIAAIRPAGEVDFTGTLIRLHIGL----EDVDDLIADLAAGF 391 (395)
T ss_pred ccc--HHHHHHHHHhCCcceeecccCCccceeccCCchhhhccCChhHhcCCCCeEEEEecc----CCHHHHHHHHHHHH
Confidence 211 1113456665431 11 111 00 12578997664 45677777777777
Q ss_pred HHh
Q psy14484 426 NEV 428 (430)
Q Consensus 426 ~~~ 428 (430)
+++
T Consensus 392 ~~~ 394 (395)
T PRK08114 392 ARI 394 (395)
T ss_pred Hhh
Confidence 654
No 329
>PRK04311 selenocysteine synthase; Provisional
Probab=99.60 E-value=2.6e-12 Score=125.40 Aligned_cols=320 Identities=12% Similarity=0.093 Sum_probs=179.0
Q ss_pred CCHHHHHHHHHHHhhccccc---cCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCc
Q psy14484 51 SNSYINKALKNQLNKLEHVM---LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKK 127 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~ 127 (430)
-++++.+++.+.+..+.... ..+...+....+++.+++++ +.+.++++++|+.|+..++..+ . +++
T Consensus 98 l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~--Gae~a~vv~sgtaAl~l~l~~l-~--------~Gd 166 (464)
T PRK04311 98 LSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALT--GAEDALVVNNNAAAVLLALNAL-A--------AGK 166 (464)
T ss_pred CCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHh--CCCeEEEECCHHHHHHHHHHHh-C--------CCC
Confidence 36899999998876543110 00112344568889999998 4457889999999999888653 2 556
Q ss_pred EEEEEcC-CCC-CcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEE
Q psy14484 128 KFICLQN-SYH-GETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAI 205 (430)
Q Consensus 128 ~vl~~~~-~yh-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~v 205 (430)
.||+.+. .|+ |.+. .+.. ..........++... .. .++++++++++ ++++++
T Consensus 167 eVIvs~~e~~~~ggs~---~i~~------~~~~~G~~l~~v~~~--~~------------t~~~dle~aI~---~~TklV 220 (464)
T PRK04311 167 EVIVSRGELVEIGGAF---RIPD------VMRQAGARLVEVGTT--NR------------THLRDYEQAIN---ENTALL 220 (464)
T ss_pred EEEEcchhhhhcCcch---hhHH------HHHHCCcEEEEECCC--CC------------CCHHHHHHhcC---ccCeEE
Confidence 7777654 232 1110 0000 001111222333321 11 16788888885 567888
Q ss_pred EEccccccC--CC--cccCChHHHHHHHHHHHhcCCEEEEeccccCCCC---c---ccccccccCCCCCceeeee--ccc
Q psy14484 206 IIEPLVQCA--GG--MIMYDSIYLKLVREICNNYNIHLIADEIAVGCGR---T---GKFFACEHAEIWPDFLCLS--KGI 273 (430)
Q Consensus 206 i~ep~v~~~--~G--~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~---~---g~~~~~~~~~~~~d~~~~s--K~l 273 (430)
+++. ..|. .| ...+ +++|.++|++||+++|+|....-++- . +.+...+.....+|+++|| |.+
T Consensus 221 ~~vh-~sN~~i~G~~~~~d----l~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~L 295 (464)
T PRK04311 221 LKVH-TSNYRIEGFTKEVS----LAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLL 295 (464)
T ss_pred EEEc-CCCccccccCCcCC----HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccc
Confidence 8877 6553 23 3445 99999999999999999985321110 0 1111112223457999988 888
Q ss_pred CCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh--cCH------------HHHHHHHHH
Q psy14484 274 TGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNI------------LQRISQDMK 339 (430)
Q Consensus 274 ~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~--~~~------------~~~~~~~~~ 339 (430)
+|. ..|++++++++++.+...+ ..-.+..+-..+++-.++|..+-+ ..+ .++..++++
T Consensus 296 gGp--~~G~i~g~~~li~~l~~~~------~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~ 367 (464)
T PRK04311 296 GGP--QAGIIVGKKELIARLKKHP------LKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAE 367 (464)
T ss_pred cCC--ceEEEEEcHHHHHHHhhch------hHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHH
Confidence 875 3788999999888776411 111111122222223333432211 111 145555666
Q ss_pred HHHHHHHchhcCCC----eee--EeecceE-------EEEEEeecCCccchhHHHHHHHHHHHC--CcEEeecCCEEEEe
Q psy14484 340 KITKALTSLITHPK----IIN--FRQKGMI-------WAFDVIIEDPEQIETFSKKFFVAALKN--ELLLRPIGNTVYLM 404 (430)
Q Consensus 340 ~l~~~l~~l~~~~~----~~~--~~~~g~~-------~~~~~~~~~~~~~~~~a~~~~~~l~~~--Gv~~~~~~~~lR~~ 404 (430)
.+.+.|+....... ... .-|-|.+ +.+.+. ... .. +..+.+.|++- .|+.+...+.+.+-
T Consensus 368 ~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~-~~~--~~--~~~l~~~lr~~~~~i~~r~~~~~~~ld 442 (464)
T PRK04311 368 RLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLT-PKD--RS--LEALAARLRLLPPPVIGRIEDGRLLLD 442 (464)
T ss_pred HHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEe-CCC--CC--HHHHHHHHhcCCCCEEEEEECCEEEEE
Confidence 77666654311000 100 0111111 222332 211 11 46788888764 57776666777776
Q ss_pred CCCCCCHHHHHHHHHHHHHHHH
Q psy14484 405 PPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 405 ~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
+- +..++|++.++++|++++.
T Consensus 443 ~r-~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 443 LR-TLEEEDEERLAAALLEALN 463 (464)
T ss_pred eC-cCCHHHHHHHHHHHHHHhh
Confidence 43 6788999999999988764
No 330
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.60 E-value=1.7e-12 Score=121.60 Aligned_cols=310 Identities=16% Similarity=0.122 Sum_probs=190.1
Q ss_pred HHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEE
Q psy14484 53 SYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICL 132 (430)
Q Consensus 53 p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~ 132 (430)
.+..+++.+.+..+... .-+...++++.+++.+ +..+++.++|||.|+.+|++++.- .+++.||+.
T Consensus 15 ~~e~~~v~~vl~sg~i~-----~G~~v~~FE~~~ae~~--G~k~ava~~sgT~AL~laL~al~i-------g~GDeVI~p 80 (374)
T COG0399 15 EEELAAVQEVLKSGWLT-----GGPFVRRFEQAFAEYL--GVKYAVAVSSGTAALHLALLALAI-------GPGDEVIVP 80 (374)
T ss_pred hHHHHHHHHHHHcCCee-----cChHHHHHHHHHHHHh--CCCeEEEecChHHHHHHHHHhcCC-------CCCCEEEec
Confidence 45566666666553321 1355678888899998 778899999999999999995542 267889988
Q ss_pred cCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC-CCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEcccc
Q psy14484 133 QNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP-DSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLV 211 (430)
Q Consensus 133 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v 211 (430)
+-+|..........+..| +++.++ +++.. |.+.+|++|. +++++|+.-. .
T Consensus 81 s~TfvATan~i~~~Ga~P-------------VFvDid~~T~ni------------d~~~ie~aIt---~~tKAIipVh-l 131 (374)
T COG0399 81 SFTFVATANAVLLVGAKP-------------VFVDIDPDTLNI------------DPDLIEAAIT---PRTKAIIPVH-L 131 (374)
T ss_pred CCchHHHHHHHHHcCCeE-------------EEEecCCcccCC------------CHHHHHHHcc---cCCeEEEEeh-h
Confidence 877765533333333322 455544 33333 8999999996 5688888755 3
Q ss_pred ccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCC--cccccccccCCCCCceeeee----cccCCCccccEEEEE
Q psy14484 212 QCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGR--TGKFFACEHAEIWPDFLCLS----KGITGGYLPLSLVMT 285 (430)
Q Consensus 212 ~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~--~g~~~~~~~~~~~~d~~~~s----K~l~gG~~~ig~~~~ 285 (430)
. |..+. ++.|.++|++||+++|.|.+|+ +|- .|+ ..|-.-|+.+|| |.|+.| --|+++.
T Consensus 132 ~---G~~~d----m~~i~~la~~~~l~vIEDaAqa-~Ga~y~gk-----~vGt~Gd~~~fSF~~~K~ittg--EGGav~t 196 (374)
T COG0399 132 A---GQPCD----MDAIMALAKRHGLPVIEDAAQA-HGATYKGK-----KVGSFGDIGAFSFHATKNLTTG--EGGAVVT 196 (374)
T ss_pred c---cCCCC----HHHHHHHHHHcCCeEEEEcchh-ccCeecCc-----ccccccceEEEEecCCCCcccc--CceEEEe
Confidence 3 43333 9999999999999999999997 432 222 233345777777 888865 3467777
Q ss_pred c-HHHHHhhh---ccCCcc--cccc-----cCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcCCCe
Q psy14484 286 T-DKIYNSIY---YKNNIN--IFLH-----SHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKI 354 (430)
Q Consensus 286 ~-~~~~~~~~---~~~~~~--~~~~-----~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~ 354 (430)
+ +++.+.++ ..|..+ ...+ +..+.-+.+.++.++.-|+.+ +++.++-++..++..+.|+++......
T Consensus 197 nd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL~~l--~~~~~~R~~~a~~Y~~~l~~~~~~~~p 274 (374)
T COG0399 197 NDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLAQLERL--DEINERRREIAQIYAEALKGLPGITLP 274 (374)
T ss_pred CCHHHHHHHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhcCCCcccc
Confidence 5 55655433 212221 0111 112222233333344444433 557777778888888888876322221
Q ss_pred eeEee-cceEEE--EEEeecCCccchhHHHHHHHHHHHCCcE----Eeec------------------------CCEEEE
Q psy14484 355 INFRQ-KGMIWA--FDVIIEDPEQIETFSKKFFVAALKNELL----LRPI------------------------GNTVYL 403 (430)
Q Consensus 355 ~~~~~-~g~~~~--~~~~~~~~~~~~~~a~~~~~~l~~~Gv~----~~~~------------------------~~~lR~ 403 (430)
....+ ...+.. +.+. .... . -+.+.+.|.++||. ..|. ...+.+
T Consensus 275 ~~~~~~~~~~~~~~i~~~-~~~~-~---R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~L 349 (374)
T COG0399 275 PEPDGAVHAWHLYTILVD-EEGI-S---RDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSL 349 (374)
T ss_pred CCCCCceeeeeeeEEEec-CCCC-C---HHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEc
Confidence 11111 111222 2222 2111 1 25788899999554 3330 145677
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 404 MPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 404 ~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
-+....+++++++.++.|++++.+
T Consensus 350 P~~p~l~~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 350 PLHPNLSEEDVDRVIEALKEVLGS 373 (374)
T ss_pred cCCCCCCHHHHHHHHHHHHHHhcc
Confidence 667778999999999999988753
No 331
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.59 E-value=3.5e-13 Score=129.48 Aligned_cols=171 Identities=15% Similarity=0.081 Sum_probs=114.3
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
++..+...+|+++++++.+ .+..++++||+.|+.+++. +.. ++++||+.++.|++........
T Consensus 46 r~~~p~~~~Le~~la~l~g--~~~al~~~SG~~Al~~~l~-~l~--------pGd~Vi~~~~~y~~t~~~~~~~------ 108 (380)
T PRK06176 46 RSGNPTRFALEELIADLEG--GVKGFAFASGLAGIHAVFS-LFQ--------SGDHVLLGDDVYGGTFRLFDKV------ 108 (380)
T ss_pred CCCChhHHHHHHHHHHHhC--CCCEEEECCHHHHHHHHHH-HcC--------CCCEEEEcCCChhHHHHHHHHH------
Confidence 5666778899999999984 4567788999999986664 332 6688999888887653211110
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
......+..+++.. |+++++++++ +++++|++|. ++|++|...+ +++|.++|
T Consensus 109 ---~~~~gi~v~~vd~~-----------------d~e~l~~ai~---~~t~lV~les-P~Nptg~~~d----i~~I~~la 160 (380)
T PRK06176 109 ---LVKNGLSCTIIDTS-----------------DLSQIKKAIK---PNTKALYLET-PSNPLLKITD----LAQCASVA 160 (380)
T ss_pred ---HHhcCeEEEEcCCC-----------------CHHHHHHhcC---cCceEEEEEC-CCCCCceecC----HHHHHHHH
Confidence 01111222333322 6788888885 5788999998 8899997776 99999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCceeee--ecccCCCccc-cEEEEEc-HHHHHhhh
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCL--SKGITGGYLP-LSLVMTT-DKIYNSIY 294 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~--sK~l~gG~~~-ig~~~~~-~~~~~~~~ 294 (430)
+++|+++|+|++++.. ..+.. .+...|++++ +|.++|..-. .|+++.+ +++.+.+.
T Consensus 161 ~~~gi~vivD~t~a~~-~~~~p-----~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~ 220 (380)
T PRK06176 161 KDHGLLTIVDNTFATP-YYQNP-----LLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIA 220 (380)
T ss_pred HHcCCEEEEECCcccc-ccCCc-----cccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHH
Confidence 9999999999998732 11111 2334677754 5999763122 4456664 45555443
No 332
>PRK05939 hypothetical protein; Provisional
Probab=99.59 E-value=3.2e-13 Score=130.30 Aligned_cols=163 Identities=11% Similarity=0.121 Sum_probs=115.6
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
+..++...++++.++++.+ .+..+.++||+.|+..++..+.. ++++||+.++.|.++......
T Consensus 43 r~g~p~~~~lE~~la~leg--~~~~v~~ssG~~Ai~~~l~all~--------~Gd~Vv~~~~~y~~t~~~~~~------- 105 (397)
T PRK05939 43 RQGTPTTAALEAKITKMEG--GVGTVCFATGMAAIAAVFLTLLR--------AGDHLVSSQFLFGNTNSLFGT------- 105 (397)
T ss_pred CCCCHHHHHHHHHHHHHhC--CCeEEEeCCHHHHHHHHHHHHcC--------CCCEEEECCCccccHHHHHHH-------
Confidence 4567888999999999984 45577788889999999887754 567888888777654221111
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
......+..+++.. |+++++++++ +++++|+++. ++|++|.+.+ +++|.++|
T Consensus 106 ---l~~~G~~v~~v~~~-----------------d~e~l~~~l~---~~tklV~ves-p~NptG~v~d----l~~I~~la 157 (397)
T PRK05939 106 ---LRGLGVEVTMVDAT-----------------DVQNVAAAIR---PNTRMVFVET-IANPGTQVAD----LAGIGALC 157 (397)
T ss_pred ---HHhcCCEEEEECCC-----------------CHHHHHHhCC---CCCeEEEEEC-CCCCCCCHHh----HHHHHHHH
Confidence 11112233444432 7788998885 5788999999 9999997866 99999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCCccccEEEEEc
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPLSLVMTT 286 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~~~ig~~~~~ 286 (430)
+++|+++|+|++|+... .++......|++ +++|.++|....+|+++..
T Consensus 158 ~~~gi~livD~t~a~~~------~~~~~~~gaDivv~S~sK~~~g~g~~igg~v~~ 207 (397)
T PRK05939 158 RERGLLYVVDNTMTSPW------LFRPKDVGASLVINSLSKYIAGHGNALGGAVTD 207 (397)
T ss_pred HHcCCEEEEECCccccc------ccCccccCCEEEEecCeecccCCCCeEEEEEec
Confidence 99999999999985211 122222345655 6789999833688887664
No 333
>KOG2862|consensus
Probab=99.59 E-value=1.1e-12 Score=115.48 Aligned_cols=282 Identities=14% Similarity=0.130 Sum_probs=174.0
Q ss_pred CeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcc-hhhhccCCCccchhhhhccCCCeeEeCCCCCCC
Q psy14484 95 GHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGET-LGALAVTNIQSFKEIYTSLLNKTYIITTPDSRN 173 (430)
Q Consensus 95 ~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (430)
.-.++.-+|+.+.+.|+-.... +.++|+++.-+-.|.. ..... .+..++..++.+-...
T Consensus 69 ~tf~isgsGh~g~E~al~N~le--------Pgd~vLv~~~G~wg~ra~D~~~------------r~ga~V~~v~~~~G~~ 128 (385)
T KOG2862|consen 69 QTFVISGSGHSGWEAALVNLLE--------PGDNVLVVSTGTWGQRAADCAR------------RYGAEVDVVEADIGQA 128 (385)
T ss_pred ceEEEecCCcchHHHHHHhhcC--------CCCeEEEEEechHHHHHHHHHH------------hhCceeeEEecCcccC
Confidence 3577778999999999988776 5566666554443432 22111 2233444453332111
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc
Q psy14484 174 INKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK 253 (430)
Q Consensus 174 ~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~ 253 (430)
. .++++++.+.+| ++.+|.+.. +.+++|...+- ++...++|++|+++|+||-|.+ +| |.
T Consensus 129 ~------------~le~i~~~lsqh--~p~~vfv~h-gdsSTgV~q~~---~~~~g~lc~k~~~lllVD~VaS-lg--gt 187 (385)
T KOG2862|consen 129 V------------PLEEITEKLSQH--KPKAVFVTH-GDSSTGVLQDL---LAISGELCHKHEALLLVDTVAS-LG--GT 187 (385)
T ss_pred c------------cHHHHHHHHHhc--CCceEEEEe-cCccccccchH---HHHHHHHhhcCCeEEEEechhh-cC--Cc
Confidence 1 789999999975 667788877 88889977763 6677899999999999999977 54 34
Q ss_pred ccccccCCCCCcee-eee-cccCCCccccEEEEEcHHHHHhhhccCCcc--cccc-----c-----------CCCCCCHH
Q psy14484 254 FFACEHAEIWPDFL-CLS-KGITGGYLPLSLVMTTDKIYNSIYYKNNIN--IFLH-----S-----------HSYSGNPL 313 (430)
Q Consensus 254 ~~~~~~~~~~~d~~-~~s-K~l~gG~~~ig~~~~~~~~~~~~~~~~~~~--~~~~-----~-----------~t~~~~~~ 313 (430)
.|.++.+++ |+. |-| |++++- ..++.+..++...+.++.. ..+ .++. + ..++++..
T Consensus 188 ~F~mDewgV--DvaytgSQKaL~aP-~GLsiisfS~ka~~~~~~r-K~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~ 263 (385)
T KOG2862|consen 188 EFEMDEWGV--DVAYTGSQKALGAP-AGLSIISFSDKALEAIRDR-KTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQ 263 (385)
T ss_pred cceehhhcc--cEEEecchhhcCCC-CCcceeecCHHHHHHHhhc-cCCceEEEEeHHhhcchhccCCcccccccCCcHH
Confidence 577777776 444 333 899864 3467788888877777652 111 1110 0 01122334
Q ss_pred HHHHHHHHHHHHhhcCH---HHHHHHHHHHHHHHHHchhcCCC-eeeEeecceEEEEEEeecCCccchhHHHHHHHHHHH
Q psy14484 314 ACCAALATLEIFNKDNI---LQRISQDMKKITKALTSLITHPK-IINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALK 389 (430)
Q Consensus 314 ~~~aa~~~l~~~~~~~~---~~~~~~~~~~l~~~l~~l~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~ 389 (430)
.....+++|+.+-++.+ .++=++.+++++..|+++.--.. ..+-...-....+..+ ...+ -.++..+++.
T Consensus 264 lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~vp-~gvD-----w~dVv~~~~~ 337 (385)
T KOG2862|consen 264 LLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVKVP-YGVD-----WKDVVAYAMS 337 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcceeeecC-CCCC-----HHHHHHHHHH
Confidence 45566677776555444 45557788899998887611111 1111222223333333 2111 1457777777
Q ss_pred CCcEEeec------CCEEEEeCCCCC-CHHHHHHHHHHHHHHHHH
Q psy14484 390 NELLLRPI------GNTVYLMPPYIL-NKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 390 ~Gv~~~~~------~~~lR~~~~~~~-t~e~i~~~~~~l~~~l~~ 427 (430)
++.+...+ +..+||.+--++ +.|.|+..++.|+.++.+
T Consensus 338 ~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 338 HYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred hcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 74443332 478898765554 778899999999988864
No 334
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.58 E-value=6.1e-13 Score=127.80 Aligned_cols=251 Identities=16% Similarity=0.132 Sum_probs=147.7
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCcc
Q psy14484 72 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 151 (430)
Q Consensus 72 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~ 151 (430)
.++.++...+|++.++++.+ .+..+++++|+.|+..++. +.. ++++||+.++.|.+.........
T Consensus 45 ~r~~~p~~~~Le~~lA~l~g--~~~~~~~~sG~aai~~~~~-~l~--------~Gd~Viv~~~~y~~~~~~~~~~~---- 109 (377)
T PRK07671 45 SRTGNPTRAALEELIAVLEG--GHAGFAFGSGMAAITAVMM-LFS--------SGDHVILTDDVYGGTYRVMTKVL---- 109 (377)
T ss_pred CCCCChHHHHHHHHHHHHhC--CCceEEeCCHHHHHHHHHH-HhC--------CCCEEEECCCccchHHHHHHHHH----
Confidence 35677888999999999985 3556778888888876653 332 56789999998875432211100
Q ss_pred chhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHH
Q psy14484 152 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 231 (430)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l 231 (430)
.....+..+++.. |+++++++++ +++++|++|. ++|++|...+ +++|.++
T Consensus 110 -----~~~G~~v~~v~~~-----------------d~~~l~~ai~---~~tklV~le~-P~NPtg~~~d----l~~I~~l 159 (377)
T PRK07671 110 -----NRFGIEHTFVDTS-----------------NLEEVEEAIR---PNTKAIYVET-PTNPLLKITD----IKKISTI 159 (377)
T ss_pred -----hcCCeEEEEECCC-----------------CHHHHHHhcC---CCCeEEEEEC-CCCCCCcccC----HHHHHHH
Confidence 0111222333321 7788998885 4678888888 8888887766 9999999
Q ss_pred HHhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCCc-cccEEEEE-cHHHHHhhhccCCcccccccCC
Q psy14484 232 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGY-LPLSLVMT-TDKIYNSIYYKNNINIFLHSHS 307 (430)
Q Consensus 232 ~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~-~~ig~~~~-~~~~~~~~~~~~~~~~~~~~~t 307 (430)
|+++|+++|+||++... ..+.. .....|++ +++|.++|.. .-.|++++ ++++.+.+.. ......
T Consensus 160 a~~~g~~lvvD~a~~~~-~~~~p-----~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~------~~~~~g 227 (377)
T PRK07671 160 AKEKGLLTIVDNTFMTP-YWQSP-----ISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHF------VQNSTG 227 (377)
T ss_pred HHHcCCEEEEECCCCcc-ccCCh-----hhhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHH------HHHhhc
Confidence 99999999999998632 11111 12345666 4679998631 12344555 4566665543 111111
Q ss_pred CCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchh-----cCCCee----------eEeecceEEEEEEeecC
Q psy14484 308 YSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKII----------NFRQKGMIWAFDVIIED 372 (430)
Q Consensus 308 ~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~-----~~~~~~----------~~~~~g~~~~~~~~~~~ 372 (430)
-..++..+..+...++.+.. ..++..++...+.+.|++.. .+|... ...+-|.++.|++. +
T Consensus 228 ~~~~~~~a~l~~~~l~tl~~--R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~-~- 303 (377)
T PRK07671 228 GILGPQDSWLLLRGLKTLGI--RMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDVG-S- 303 (377)
T ss_pred CCCCHHHHHHHHcCcChHHH--HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEeC-C-
Confidence 12244433333333333221 34455566666666665421 112211 12456888888885 3
Q ss_pred CccchhHHHHHHHHH
Q psy14484 373 PEQIETFSKKFFVAA 387 (430)
Q Consensus 373 ~~~~~~~a~~~~~~l 387 (430)
.+.+.+|.+.|
T Consensus 304 ----~~~~~~f~~~l 314 (377)
T PRK07671 304 ----EETANKVLERL 314 (377)
T ss_pred ----HHHHHHHHHhC
Confidence 11134566654
No 335
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.58 E-value=2e-12 Score=118.99 Aligned_cols=311 Identities=16% Similarity=0.165 Sum_probs=202.5
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEEcC-CchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhh
Q psy14484 77 KPVIKLSEKLSSLTQYKLGHCFYGS-DGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEI 155 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~v~~~~-sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~ 155 (430)
+...+|+++|++.. +.+.|.+-+ +|++.-.+.+.+++.|+..+|...|+ ++..+.+.||....+.++.+.
T Consensus 109 ~li~~Lq~~L~~IT--G~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~-~~LIP~SAHGTNPASAam~G~------ 179 (496)
T COG1003 109 ELIYELQEWLKEIT--GMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRN-ICLIPDSAHGTNPASAAMAGF------ 179 (496)
T ss_pred HHHHHHHHHHHHhc--CCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCc-EEEeeccccCCChhhHhhcCc------
Confidence 55678899999998 778887775 99999999999999999999986555 455567999988777776662
Q ss_pred hhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhc
Q psy14484 156 YTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNY 235 (430)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~ 235 (430)
+++.++..++... |+++|++++. ++++++++.- + |+-|.. .+-+.+|+++.+++
T Consensus 180 ------~VV~V~~~~~G~V------------DlddLk~k~~---~~~AalMiTn-P-sT~GvF---E~~I~ei~~ivH~~ 233 (496)
T COG1003 180 ------KVVVVKCDENGNV------------DLDDLRAKAE---DNLAALMITN-P-STLGVF---EEDIREICEIVHEA 233 (496)
T ss_pred ------eEEEEecCCCCCc------------cHHHHHHHhc---cceeEEEecc-C-cccccc---hhhHHHHHHHHHHc
Confidence 3345555444443 9999999996 5677766643 2 333422 34589999999999
Q ss_pred CCEEEEecc----ccCCCCcccc-cccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhcc-------------C
Q psy14484 236 NIHLIADEI----AVGCGRTGKF-FACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYK-------------N 297 (430)
Q Consensus 236 gi~li~DEv----~~g~g~~g~~-~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~-------------~ 297 (430)
|..|..|-+ +-|..|.|.+ +...++++. -||+-.-|||+-..|.+.+++.+...+-.+ +
T Consensus 234 Gg~vY~DGANlNA~vG~~rPGd~G~DV~HlNLH---KTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~ 310 (496)
T COG1003 234 GGQVYYDGANLNAIVGLARPGDMGFDVVHLNLH---KTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYD 310 (496)
T ss_pred CCEEEecCcchhhhhccccccccccceEEeecc---cccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCC
Confidence 999999954 3355555542 222222221 145544556555688888888776544320 0
Q ss_pred CcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHH---HHHHHHHHHHHHHchhcCCCeeeEe-ecceEEEEEEeecCC
Q psy14484 298 NINIFLHSHSYSGNPLACCAALATLEIFNKDNILQR---ISQDMKKITKALTSLITHPKIINFR-QKGMIWAFDVIIEDP 373 (430)
Q Consensus 298 ~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~---~~~~~~~l~~~l~~l~~~~~~~~~~-~~g~~~~~~~~~~~~ 373 (430)
...+......+.++......+++.+.++..+.+.+. .--++.|+..+|+.. ++.+..-. ....=+.++.. .-.
T Consensus 311 ~~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~--y~~~y~~~~~~~HE~ild~r-~l~ 387 (496)
T COG1003 311 GKKSIGVSAAPYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGY--YPVPYTGENRVAHECILDAR-PLK 387 (496)
T ss_pred CCccceeeccccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhc--CccccCCCCcceeEEEeech-HhH
Confidence 111233355667787778888888888876655543 344788888888752 22211101 01111112211 111
Q ss_pred ccchhHHHHHHHHHHHCCcEEe----e--cCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 374 EQIETFSKKFFVAALKNELLLR----P--IGNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 374 ~~~~~~a~~~~~~l~~~Gv~~~----~--~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
....-.+..++++|+..|+... | -.+.+.+-|.-.-+++++|++++++.++..+.
T Consensus 388 ~~~Gv~~~DvAKrLlD~GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea 448 (496)
T COG1003 388 KETGVRALDVAKRLLDYGFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEA 448 (496)
T ss_pred hhcCCcHHHHHHHHHhcCCCCCcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 1111125789999999998643 2 24789999999999999999999999887654
No 336
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.57 E-value=9.7e-12 Score=121.08 Aligned_cols=314 Identities=13% Similarity=0.080 Sum_probs=173.1
Q ss_pred CCHHHHHHHHHHHhhccccc---cCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCc
Q psy14484 51 SNSYINKALKNQLNKLEHVM---LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKK 127 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~ 127 (430)
-++++.+++.+.+..+.... ..+........+++.++++++ .+..+++++|+.|+..++..+ . +++
T Consensus 93 l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~g--ae~alvv~sg~aAi~l~l~~l-~--------~Gd 161 (454)
T TIGR00474 93 LAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTG--AEDALVVNNNAAAVLLALNTL-A--------KGK 161 (454)
T ss_pred CCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhC--CCcEEEECCHHHHHHHHHHHh-C--------CcC
Confidence 46899999999887643110 011223456788899999985 455777899999998888543 2 566
Q ss_pred EEEEEcCCC---CCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEE
Q psy14484 128 KFICLQNSY---HGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAA 204 (430)
Q Consensus 128 ~vl~~~~~y---hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~ 204 (430)
.||+.+..+ .|....... ..........+... .. .++++++++++ +++++
T Consensus 162 eVIvs~~e~v~~ggs~~i~~~----------~~~~G~~~~~v~~~--~~------------~~l~dle~aI~---~~T~l 214 (454)
T TIGR00474 162 EVIVSRGELVEIGGSFRIPDV----------MEQSGAKLVEVGTT--NR------------THLKDYEDAIT---ENTAL 214 (454)
T ss_pred EEEECCChhhhhcchhhHHHH----------HHHcCCEEEEeCCC--CC------------CCHHHHHHhcC---cCCEE
Confidence 777765543 222111000 01111222333221 11 16788888885 56788
Q ss_pred EEEccccccC--CC--cccCChHHHHHHHHHHHhcCCEEEEeccccCCCCc------ccccccccCCCCCceeeee--cc
Q psy14484 205 IIIEPLVQCA--GG--MIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRT------GKFFACEHAEIWPDFLCLS--KG 272 (430)
Q Consensus 205 vi~ep~v~~~--~G--~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~------g~~~~~~~~~~~~d~~~~s--K~ 272 (430)
++++. ..|. .| ...+ +++|.++|++||+++++|....-++.. ..+...+......|+++|| |.
T Consensus 215 v~~~h-~sN~~~~G~~~~~d----l~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~ 289 (454)
T TIGR00474 215 LLKVH-TSNYRIVGFTEEVS----IAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKL 289 (454)
T ss_pred EEEEc-cCcccccCCCCCCC----HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccc
Confidence 77777 5543 24 3555 999999999999999999642111111 1111122233457999999 99
Q ss_pred cCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh--cCH------------HHHHHHHH
Q psy14484 273 ITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNI------------LQRISQDM 338 (430)
Q Consensus 273 l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~--~~~------------~~~~~~~~ 338 (430)
++|. ..|++++++++++.+...+ ..-.+...-..+++..+++...-. +.+ .++..+++
T Consensus 290 LgGp--~~G~i~g~~~~i~~l~~~~------l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A 361 (454)
T TIGR00474 290 LGGP--QAGIIVGKKELIERLKKNP------LTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARA 361 (454)
T ss_pred cCCC--eEEEEEECHHHHHhhhhch------hHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHH
Confidence 9774 3788999998887665410 000011111222223333332211 111 13455566
Q ss_pred HHHHHHHHch-h-cCCC-eeeE---eecceE-------EEEEEeecCCccchhHHHHHHHHHHHCC--cEEeecCCEEEE
Q psy14484 339 KKITKALTSL-I-THPK-IINF---RQKGMI-------WAFDVIIEDPEQIETFSKKFFVAALKNE--LLLRPIGNTVYL 403 (430)
Q Consensus 339 ~~l~~~l~~l-~-~~~~-~~~~---~~~g~~-------~~~~~~~~~~~~~~~~a~~~~~~l~~~G--v~~~~~~~~lR~ 403 (430)
..+.+.|+.. . .... +... -|-|.+ +.+.+. ... .. +..+.+.|++.. |+.+...+.+.+
T Consensus 362 ~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~-~~~--~~--~~~l~~~lr~~~~~ii~r~~~~~~~l 436 (454)
T TIGR00474 362 ERLAKRLKAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLT-PDG--LS--AEKLEARLRELPPPIIGRIEDDRFLL 436 (454)
T ss_pred HHHHHHHHhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEe-cCC--CC--HHHHHHHHhcCCCCEEEEEECCEEEE
Confidence 6676666553 1 1100 0000 111221 222332 211 11 467888887664 666655677777
Q ss_pred eCCCCCCHHHHHHHHHHH
Q psy14484 404 MPPYILNKNEIQHMTSAI 421 (430)
Q Consensus 404 ~~~~~~t~e~i~~~~~~l 421 (430)
-+- +..++|++.++++|
T Consensus 437 d~r-~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 437 DLR-TLLEDEEELLIEAL 453 (454)
T ss_pred EeC-cCCHHHHHHHHHHh
Confidence 644 66888888888776
No 337
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.57 E-value=1.2e-12 Score=124.84 Aligned_cols=289 Identities=14% Similarity=0.183 Sum_probs=168.7
Q ss_pred cCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCc
Q psy14484 71 LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ 150 (430)
Q Consensus 71 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~ 150 (430)
..+..++....+++.|+++. +.+.++.++||..|+..++..+.. +.++||+....|++.......
T Consensus 49 Y~R~gnPt~~~le~~la~Le--~g~~a~~~~SGmaAi~~~l~~ll~--------~Gd~iv~~~~~Y~~t~~~~~~----- 113 (386)
T PF01053_consen 49 YSRYGNPTVRALEQRLAALE--GGEDALLFSSGMAAISAALLALLK--------PGDHIVASDDLYGGTYRLLEE----- 113 (386)
T ss_dssp BTTTC-HHHHHHHHHHHHHH--T-SEEEEESSHHHHHHHHHHHHS---------TTBEEEEESSSSHHHHHHHHH-----
T ss_pred eeccccccHHHHHHHHHHhh--cccceeeccchHHHHHHHHHhhcc--------cCCceEecCCccCcchhhhhh-----
Confidence 34667788999999999998 447899999999999999887765 568899999999875322211
Q ss_pred cchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHH
Q psy14484 151 SFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVRE 230 (430)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~ 230 (430)
.+.....++.++... |+++++++++ +++++|++|+ +.|+...+.. +++|.+
T Consensus 114 ----~l~~~gv~v~~~d~~-----------------d~~~l~~~l~---~~t~~v~~Es-psNP~l~v~D----l~~i~~ 164 (386)
T PF01053_consen 114 ----LLPRFGVEVTFVDPT-----------------DLEALEAALR---PNTKLVFLES-PSNPTLEVPD----LEAIAK 164 (386)
T ss_dssp ----CHHHTTSEEEEESTT-----------------SHHHHHHHHC---TTEEEEEEES-SBTTTTB-------HHHHHH
T ss_pred ----hhcccCcEEEEeCch-----------------hHHHHHhhcc---ccceEEEEEc-CCCccccccc----HHHHHH
Confidence 112223344444332 7899999996 5899999999 9998876665 999999
Q ss_pred HHHhcC-CEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCC-ccccEEEEEcH--HHHHhhhccCCcccccc
Q psy14484 231 ICNNYN-IHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGG-YLPLSLVMTTD--KIYNSIYYKNNINIFLH 304 (430)
Q Consensus 231 l~~~~g-i~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG-~~~ig~~~~~~--~~~~~~~~~~~~~~~~~ 304 (430)
+|+++| +++++|.+.... ..+..+....|++ +++|.++|. -.-.|+++++. ++.+.+.. . ....
T Consensus 165 ~a~~~g~~~~vVDnT~atp------~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~---~-~~~~ 234 (386)
T PF01053_consen 165 LAKEHGDILVVVDNTFATP------YNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLRE---F-RRLL 234 (386)
T ss_dssp HHHHTTT-EEEEECTTTHT------TTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHH---H-HHHH
T ss_pred HHHHhCCceEEeeccccce------eeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcc---h-hhhc
Confidence 999998 999999986421 1223333446776 466999873 22355666554 66665543 0 0112
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhc-----CCCee----------eEeecceEEEEEEe
Q psy14484 305 SHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-----HPKII----------NFRQKGMIWAFDVI 369 (430)
Q Consensus 305 ~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~-----~~~~~----------~~~~~g~~~~~~~~ 369 (430)
+.+. +|..+......|+.+ +-..++..+++..+.+.|++-+. +|.+. ...+-|.++.|++.
T Consensus 235 G~~~--~p~da~ll~rgl~Tl--~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~ 310 (386)
T PF01053_consen 235 GATL--SPFDAWLLLRGLRTL--PLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELK 310 (386)
T ss_dssp T-B----HHHHHHHHHHHTTH--HHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEES
T ss_pred Cccc--hHHHHHHHhcCCCcH--HHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEec
Confidence 2222 333222222222211 11234555566666666654311 11110 13366779999998
Q ss_pred ecCCccchhHHHHHHHHHHH--CC--------cEEeec------------------CCEEEEeCCCCCCHHHHHHHHHHH
Q psy14484 370 IEDPEQIETFSKKFFVAALK--NE--------LLLRPI------------------GNTVYLMPPYILNKNEIQHMTSAI 421 (430)
Q Consensus 370 ~~~~~~~~~~a~~~~~~l~~--~G--------v~~~~~------------------~~~lR~~~~~~~t~e~i~~~~~~l 421 (430)
+.. +.+..|.+.|.- .| ++..|. ++.+|+++.+ |+.+.+++.|
T Consensus 311 -~~~----~~~~~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGl----Ed~~dLi~Dl 381 (386)
T PF01053_consen 311 -GGE----EAARRFLDALKLFSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGL----EDPDDLIADL 381 (386)
T ss_dssp -SHH----HHHHHHHHH-SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--S----S-HHHHHHHH
T ss_pred -cch----hhhHhHHhhhhhHhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEecc----CCHHHHHHHH
Confidence 521 224667777632 11 111120 2578997664 4566677777
Q ss_pred HHHHH
Q psy14484 422 FQTFN 426 (430)
Q Consensus 422 ~~~l~ 426 (430)
+++|+
T Consensus 382 ~~AL~ 386 (386)
T PF01053_consen 382 EQALE 386 (386)
T ss_dssp HHHHH
T ss_pred HHhcC
Confidence 76653
No 338
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.57 E-value=3.8e-12 Score=110.03 Aligned_cols=304 Identities=13% Similarity=0.143 Sum_probs=186.3
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhh
Q psy14484 77 KPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIY 156 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~ 156 (430)
++..++.+.|++++ +.|.+.+|+|+-+|-.+++..++ ++...++.+...|=.+..+....+.
T Consensus 61 PpI~~F~~dlaeFl--g~D~~R~t~GARe~KfavMhal~---------~~gd~vV~D~~aHYttyvAAEragl------- 122 (382)
T COG1103 61 PPIKDFLEDLAEFL--GMDEVRVTAGAREAKFAVMHALC---------KEGDWVVVDSLAHYTTYVAAERAGL------- 122 (382)
T ss_pred CcHHHHHHHHHHHh--CCceeeecccchhhHHHHHHHhc---------cCCCEEEEcCcchHHHHHHHHhcCC-------
Confidence 55667777788888 78899999999999999998887 3455677787777555444433331
Q ss_pred hccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcC
Q psy14484 157 TSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYN 236 (430)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g 236 (430)
....+|+.....+....+. ..+.+++..++-++.+++.++.. +.++.|.... .+.+.++|+++|
T Consensus 123 -------~v~eVp~tg~Pey~i~~e~----y~~viee~~~~~g~~~~lallTh-~Dg~YGNl~D----akkva~ic~e~g 186 (382)
T COG1103 123 -------NVAEVPNTGYPEYKITPEG----YAEVIEEVKDEGGDPPALALLTH-VDGEYGNLAD----AKKVAKICREYG 186 (382)
T ss_pred -------eEEecCCCCCCceEecHHH----HHHHHHHHHhccCCCceEEEEec-cCCCcCCchh----hHHHHHHHHHcC
Confidence 2222333332222222222 33455555555445688888888 9999996655 899999999999
Q ss_pred CEEEEeccccCCCCcccccccccCCCCCceeeee--cccCCCccccEEEEEcHHHHHhhhc-cCCcccc----cccCCCC
Q psy14484 237 IHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITGGYLPLSLVMTTDKIYNSIYY-KNNINIF----LHSHSYS 309 (430)
Q Consensus 237 i~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s--K~l~gG~~~ig~~~~~~~~~~~~~~-~~~~~~~----~~~~t~~ 309 (430)
+++++.-+|+ .||. ..+...+.+|+++-| |+|+.. .|+|.+..++++.+.... +++..+. ..+-|.-
T Consensus 187 vPlllN~AYt-~Grm----pvs~ke~g~DFiVgSGHKsmAAs-~PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~r 260 (382)
T COG1103 187 VPLLLNCAYT-VGRM----PVSGKEIGADFIVGSGHKSMAAS-APIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVR 260 (382)
T ss_pred CceEeeccee-eccc----cccccccCCCEEEecCccchhcc-CCeeEEeehhHHHHHHHhhcccccccceeeeeccccc
Confidence 9999999998 6664 244456789999877 788876 499999999999876543 1111111 1122333
Q ss_pred CCHHHHHHHHHHHHHH-hh-cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecC-----CccchhHHHH
Q psy14484 310 GNPLACCAALATLEIF-NK-DNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIED-----PEQIETFSKK 382 (430)
Q Consensus 310 ~~~~~~~aa~~~l~~~-~~-~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~a~~ 382 (430)
+.|+... .+.+-.+ ++ ..|.+.++ ..++|.+.|+.+.....+..-+-..-+..|+-+ .- +.... .-.
T Consensus 261 GapivTl--mASfP~V~eRVkrWdeEv~-kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp-~f~eIakk~~r~--gyF 334 (382)
T COG1103 261 GAPIVTL--MASFPHVVERVKRWDEEVE-KARWFVAELEKIGGVKQLGERPKNHDLMKFETP-VFHEIAKKHKRK--GYF 334 (382)
T ss_pred CchHHHH--HhcCHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhHHHhCCCCcccceeeecCc-hHHHHHHhCcCC--cee
Confidence 3333221 1222111 11 23444443 455676777665322222222222223334332 10 00011 124
Q ss_pred HHHHHHHCCcEEeecC--CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 383 FFVAALKNELLLRPIG--NTVYLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 383 ~~~~l~~~Gv~~~~~~--~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
+++.|+++||.-...| .++.++ -+..+.|+++..++++++++.+
T Consensus 335 lY~ELK~RgI~GI~~G~Tk~~K~s-vyGl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 335 LYEELKKRGIHGIQPGQTKYFKLS-VYGLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred eHHHHHhcCccccccCceeEEEEE-eecCCHHHHHHHHHHHHHHHHh
Confidence 6788999988755444 455665 4578999999999999998764
No 339
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.56 E-value=3.8e-13 Score=121.54 Aligned_cols=166 Identities=16% Similarity=0.191 Sum_probs=124.6
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
+...+....++++++.+-+ +. ..+.+.||..|...|+..+.+ .++.||.-..-|-|..-. +
T Consensus 58 Ri~NPT~~vlE~RiAaLEG-G~-aa~a~aSG~AA~~~ai~~la~--------aGD~iVss~~LYGGT~~l---------f 118 (426)
T COG2873 58 RIMNPTTDVLEERIAALEG-GV-AALAVASGQAAITYAILNLAG--------AGDNIVSSSKLYGGTYNL---------F 118 (426)
T ss_pred eccCchHHHHHHHHHHhhc-ch-hhhhhccchHHHHHHHHHhcc--------CCCeeEeeccccCchHHH---------H
Confidence 4556777888889988864 33 456678999999999988876 678899888888665321 2
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
...+..+.-++.++..+ |++.++++|+ +++++|++|. +.|+.+.+.. ++.|.++|
T Consensus 119 ~~tl~~~Gi~v~fvd~~-----------------d~~~~~~aI~---~nTkavf~Et-igNP~~~v~D----ie~ia~iA 173 (426)
T COG2873 119 SHTLKRLGIEVRFVDPD-----------------DPENFEAAID---ENTKAVFAET-IGNPGLDVLD----IEAIAEIA 173 (426)
T ss_pred HHHHHhcCcEEEEeCCC-----------------CHHHHHHHhC---cccceEEEEe-ccCCCccccC----HHHHHHHH
Confidence 23334445566676544 7899999996 6899999999 9999887766 99999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCCccccEEEEEcHH
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPLSLVMTTDK 288 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~~~ig~~~~~~~ 288 (430)
++||+++|+|...+. ++.+...+...|++ +++|.++|.+..||.+++...
T Consensus 174 h~~gvpliVDNT~at------pyl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~G 225 (426)
T COG2873 174 HRHGVPLIVDNTFAT------PYLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVDGG 225 (426)
T ss_pred HHcCCcEEEecCCCc------ceecchhhcCCCEEEEeecccccCCccccceEEEeCC
Confidence 999999999987652 13344445567877 577999994478998877554
No 340
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.56 E-value=2e-12 Score=123.62 Aligned_cols=345 Identities=12% Similarity=0.115 Sum_probs=183.7
Q ss_pred CCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHH
Q psy14484 31 VSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVA 110 (430)
Q Consensus 31 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~a 110 (430)
.....|||+.+-.++ +.+.++....+..+... +..++...+|++.+++.+ +.++++++++|+.|+.++
T Consensus 42 ~~~~v~IDLlSDS~T-------~aMs~~q~a~~~vGDd~---Yagd~s~~~LE~~vAe~l--G~e~aV~v~sGTaAl~ll 109 (460)
T PRK13237 42 RSEDVYIDLLTDSGT-------NAMSDRQWAGMMIGDEA---YAGSRNFYHLEETVQEYY--GFKHVVPTHQGRGAENLL 109 (460)
T ss_pred CcCcEEEECcccCCc-------hhccHHHHHHHhhcchh---hcCCCcHHHHHHHHHHHH--CCCeEEEeCCHHHHHHHH
Confidence 355689999998665 22333322233333221 344566778999999998 667899999999999986
Q ss_pred HHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhh-hccCCCccchhhhhccC-CCee--EeCCCCCCCCCCCCChhHHHHH
Q psy14484 111 LKMSFHYWYNKGFLNKKKFICLQNSYHGETLGA-LAVTNIQSFKEIYTSLL-NKTY--IITTPDSRNINKGNSANEIARC 186 (430)
Q Consensus 111 l~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~-~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~ 186 (430)
..+... +++. | ++.+|-.+..+ ....+.. +.... .+.. ....|.... -
T Consensus 110 ~~l~v~--------pGd~-V--p~n~~f~Tt~ahI~~~Ga~-----fvDi~~d~a~~~~~~~p~tgn------------l 161 (460)
T PRK13237 110 SRIAIK--------PGQY-V--PGNMYFTTTRYHQELNGGI-----FVDIIIDEAHDAQSDHPFKGN------------V 161 (460)
T ss_pred HHhCCC--------CcCE-E--CCccchHhhHHHHHhCCcE-----EEeeecccccccccCCCCCCC------------c
Confidence 443322 3343 2 44434332221 2222210 00000 0000 001122222 2
Q ss_pred HHHHHHHHHHhC-CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCC-----------Ccccc
Q psy14484 187 AIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG-----------RTGKF 254 (430)
Q Consensus 187 d~~~le~~l~~~-~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g-----------~~g~~ 254 (430)
|++.|+++|++. ..+++++.++- ..|..|..+.+.+.+++|.++|++||+.||.|.++. ++ +.+..
T Consensus 162 D~d~Le~~I~~~~~~~~~lV~a~i-tvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra-~gna~fI~~re~~y~~~~ 239 (460)
T PRK13237 162 DLDKLQALIDEVGAENIAYICLAV-TVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRC-VENAYFIKEREEGYQDKS 239 (460)
T ss_pred CHHHHHHHhccccCCccCceEEEE-ecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcch-hcChhhhcccccccCCCc
Confidence 899999999864 23444444433 334443366677789999999999999999999886 32 11111
Q ss_pred cc--cccCCCCCceeeee--cccCCCcccc-EEEEEc-HHHHHhhhccCCccccc-ccCCCCCCHH-HHHHHHHHHHHHh
Q psy14484 255 FA--CEHAEIWPDFLCLS--KGITGGYLPL-SLVMTT-DKIYNSIYYKNNINIFL-HSHSYSGNPL-ACCAALATLEIFN 326 (430)
Q Consensus 255 ~~--~~~~~~~~d~~~~s--K~l~gG~~~i-g~~~~~-~~~~~~~~~~~~~~~~~-~~~t~~~~~~-~~~aa~~~l~~~~ 326 (430)
.. .....-..|+++|| |.++. ++ |+++.+ +++.+.++. ..... ...|+++-.- -+.+....|+...
T Consensus 240 i~ei~~e~~s~aD~~t~S~~K~~~~---~~GG~i~t~D~eL~~~~r~---~~~~~eG~~tygg~~grd~~alAvgl~E~~ 313 (460)
T PRK13237 240 IKEIVHEMFSYADGCTMSGKKDCLV---NIGGFLAMNDEELFDEAKE---LVVVYEGMPSYGGMAGRDMEAMAIGIEESV 313 (460)
T ss_pred HhHHhhhccCcCcEEEEeCCCCCCC---CCceEEEECCHHHHHHHHH---hccccCCCcCCCChhhhHHHHHHhHHHhhc
Confidence 00 00111236888776 65543 44 455554 567766654 11111 1224444222 1222222344333
Q ss_pred hcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEee--cCCccchhH-HHHHHHHHH-HCCcEEee------
Q psy14484 327 KDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVII--EDPEQIETF-SKKFFVAAL-KNELLLRP------ 396 (430)
Q Consensus 327 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~-a~~~~~~l~-~~Gv~~~~------ 396 (430)
++++..+.-...++|.+.|++. +.|.+.. ..|.-+.++... +... ..+| +..++-.|. +-||-...
T Consensus 314 ~~~y~~~ri~~~~~l~~~L~~~-Gvpv~~p--~ggH~v~vda~~~lph~~-~~~~p~~al~~~ly~~~GiR~~e~g~~~~ 389 (460)
T PRK13237 314 QYEYIEHRVGQVRYLGEKLLAA-GVPIVEP--VGGHAVFLDARRFLPHLP-QDQFPAQALAAELYIESGVRSMERGIVSA 389 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHC-CCceecC--CCceEEEEEhHHhCCCCC-cccChHHHHHHHHHHHhCcCeEeecceec
Confidence 4466666666778888888765 4555433 233333333220 0000 1111 345555553 33553321
Q ss_pred ----c--------CCEEEEeCCCCC-CHHHHHHHHHHHHHHHHH
Q psy14484 397 ----I--------GNTVYLMPPYIL-NKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 397 ----~--------~~~lR~~~~~~~-t~e~i~~~~~~l~~~l~~ 427 (430)
. -..+|+.++.-. |.+++|...++|..+.+.
T Consensus 390 ~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 433 (460)
T PRK13237 390 GRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH 433 (460)
T ss_pred ccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence 0 146788887765 999999999999888753
No 341
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.56 E-value=1.3e-12 Score=124.42 Aligned_cols=363 Identities=12% Similarity=0.106 Sum_probs=193.4
Q ss_pred CCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHH-HHHHHhhccccccCCCCCHHHHHHHHHHHhh
Q psy14484 11 SSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKA-LKNQLNKLEHVMLSNLTHKPVIKLSEKLSSL 89 (430)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 89 (430)
.....+-..+.|. +.......|||+.+-.++ +.+.++ +... ..+.. .+..++...+|++.+++.
T Consensus 19 ~r~~~l~~ag~n~----f~l~~~~v~iDLltDsgT-------~aMs~~q~a~~-~~GDe---~yag~~s~~~lE~~va~~ 83 (450)
T TIGR02618 19 EREKKMQEAGYNT----FLLNSEDVYIDLLTDSGT-------NAMSDKQWAGL-MMGDE---AYAGSRNFYHLERTVREL 83 (450)
T ss_pred HHHHHHHHcCCCc----ccCccCceEEEcccCCCc-------HHHHHHHHHHh-hhcch---hhcCCCcHHHHHHHHHHH
Confidence 3333444445554 233355689999988554 444444 3322 22222 134556677999999999
Q ss_pred cCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCC--e-eEe
Q psy14484 90 TQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNK--T-YII 166 (430)
Q Consensus 90 ~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~ 166 (430)
+ +.+++++++||+.|...+..+... +++.| +++.|...+.......+.. +.....+ . ...
T Consensus 84 ~--G~~~av~v~sGT~Al~ll~~l~l~--------pGDeV--psn~~f~Tt~ahIe~~Gav-----~vDi~~dea~~~~~ 146 (450)
T TIGR02618 84 Y--GFKYVVPTHQGRGAENLLSQIAIK--------PGDYV--PGNMYFTTTRYHQEKNGAT-----FVDIIIDEAHDAQL 146 (450)
T ss_pred H--CCCeEEEcCCHHHHHHHHHHhCCC--------CcCEE--CCceeHHHHHHHHHhCCeE-----EEeeeccccccccc
Confidence 9 677999999999998865433221 34443 3333323222212222210 0000000 0 001
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHhC-CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccc
Q psy14484 167 TTPDSRNINKGNSANEIARCAIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIA 245 (430)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~-~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~ 245 (430)
..|.+.. -|++.|+++|+.. ..+++++.++- ..|..|..+.+.+.+++|.++|++||+.+|.|.++
T Consensus 147 ~~p~~Gn------------iD~~~Le~aI~~~~~~~~~lV~~e~-t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR 213 (450)
T TIGR02618 147 NIPFKGN------------VDLKKLQKLIDEVGADKIPYICLAV-TVNLAGGQPVSMANMREVRELCEAHGIKVFYDATR 213 (450)
T ss_pred CCCCCCC------------cCHHHHHHHhccccCcccCceEEEE-ecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccc
Confidence 1122122 2899999999853 22444555544 44444337777788999999999999999999987
Q ss_pred cCCCC-------ccccccccc------CCCCCceeeeecccCCCccccEEEEE--cHHHHHhhhccCCccccccc-CCCC
Q psy14484 246 VGCGR-------TGKFFACEH------AEIWPDFLCLSKGITGGYLPLSLVMT--TDKIYNSIYYKNNINIFLHS-HSYS 309 (430)
Q Consensus 246 ~g~g~-------~g~~~~~~~------~~~~~d~~~~sK~l~gG~~~ig~~~~--~~~~~~~~~~~~~~~~~~~~-~t~~ 309 (430)
. ++. .+....... .--..|.+++|-.-.++ .|+|.+++ .+++.+.++. .+....+ .|++
T Consensus 214 ~-~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~-~~~GG~l~~~d~~l~~k~r~---~~~~~eG~~tyG 288 (450)
T TIGR02618 214 C-VENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCL-VNIGGFLCMNDDEMFQSAKE---LVVVFEGMPSYG 288 (450)
T ss_pred h-hhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCC-CCCceEEEeCCHHHHHHHHH---HhhhcCCccccC
Confidence 6 311 000000000 01125665554221223 57776666 5677776654 1111111 1333
Q ss_pred CCHH-HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecC--CccchhH-HHHHHH
Q psy14484 310 GNPL-ACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIED--PEQIETF-SKKFFV 385 (430)
Q Consensus 310 ~~~~-~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~-a~~~~~ 385 (430)
+-.. .+.+...+|+..-+..+.++.....++|.+.|++. +.|.+. +..|..+.++.. .- ..+..+| +..++-
T Consensus 289 gla~r~~~ala~gL~e~~~~~y~~~r~~~a~~La~~L~~~-Gvpv~~--p~ggh~V~vda~-~~lph~~~~~~p~~al~~ 364 (450)
T TIGR02618 289 GLAGRDMEAMAIGIREAVDYEYIEHRVKQVRYLGDKLKAA-GVPIVE--PVGGHAVFLDAR-RFLPHIPQDQFPAQSLAA 364 (450)
T ss_pred chhhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHC-CCcccC--CCCcceEEEEhH-HhCCCCChhhChHHHHHH
Confidence 3121 22222234443333455555666788999999877 555533 345566666543 20 0011111 345555
Q ss_pred HHH-HCCcEEee----------c------C--CEEEEeCCCCC-CHHHHHHHHHHHHHHHHH
Q psy14484 386 AAL-KNELLLRP----------I------G--NTVYLMPPYIL-NKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 386 ~l~-~~Gv~~~~----------~------~--~~lR~~~~~~~-t~e~i~~~~~~l~~~l~~ 427 (430)
.|. +-||-... . . ..+|+.++.-. |.+++|...++|..+.++
T Consensus 365 ~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 426 (450)
T TIGR02618 365 SIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKH 426 (450)
T ss_pred HHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 553 33553221 0 1 46788887765 999999999999888753
No 342
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.55 E-value=2e-13 Score=116.24 Aligned_cols=166 Identities=24% Similarity=0.241 Sum_probs=114.3
Q ss_pred HHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhcc
Q psy14484 80 IKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSL 159 (430)
Q Consensus 80 ~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 159 (430)
+++++.++++++.+.+++++++||++|+..+++.++. .++.|++.++.|++.........
T Consensus 3 ~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~--------~~~~v~~~~~~~~~~~~~~~~~~------------ 62 (170)
T cd01494 3 EELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLG--------PGDEVIVDANGHGSRYWVAAELA------------ 62 (170)
T ss_pred HHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCC--------CCCEEEEeecccceehhhHHHhc------------
Confidence 5777888888865677999999999999999998864 46789999999988752111111
Q ss_pred CCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEE
Q psy14484 160 LNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHL 239 (430)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~l 239 (430)
..+...++.+...... .+.+.+++... ..+++++++++ .++++|...+ +++|.++|+++|+++
T Consensus 63 g~~~~~v~~~~~~~~~----------~~~~~~~~~~~--~~~~~~v~~~~-~~~~~g~~~~----~~~l~~~~~~~~~~l 125 (170)
T cd01494 63 GAKPVPVPVDDAGYGG----------LDVAILEELKA--KPNVALIVITP-NTTSGGVLVP----LKEIRKIAKEYGILL 125 (170)
T ss_pred CCEEEEeccCCCCccc----------hhhhhhhhccc--cCceEEEEEec-CcCCCCeEcC----HHHHHHHHHHcCCEE
Confidence 1222333333211110 12224433322 46889999999 8999987777 699999999999999
Q ss_pred EEeccccCCCCcccccccccCCCCCceeeee--cccCCCccccEEEEEc
Q psy14484 240 IADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITGGYLPLSLVMTT 286 (430)
Q Consensus 240 i~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s--K~l~gG~~~ig~~~~~ 286 (430)
|+|+++.++...... .......+|+++.| |.+++ .++|+++++
T Consensus 126 i~D~a~~~~~~~~~~--~~~~~~~~d~~~~s~~K~~~~--~~~G~l~~~ 170 (170)
T cd01494 126 LVDAASAGGASPAPG--VLIPEGGADVVTFSLHKNLGG--EGGGVVIVK 170 (170)
T ss_pred EEecccccccccccc--cccccccCCEEEEEcccccCC--CceEEEEeC
Confidence 999999866543322 12223458988877 99987 578888764
No 343
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.55 E-value=8.5e-14 Score=129.65 Aligned_cols=228 Identities=11% Similarity=0.078 Sum_probs=131.5
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEE-EcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCcc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCF-YGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 151 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~-~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~ 151 (430)
..+.....++++.++++++ .++++ +++|+++++..++..+.. ++++|++..++|... ...+...+
T Consensus 55 ~~~~g~i~~~~~~~A~~~g--a~~~~~~~~Gst~a~~~~l~al~~--------~gd~Vlv~~~~h~s~-~~~~~~~g--- 120 (294)
T cd00615 55 LDPTGPIKEAQELAARAFG--AKHTFFLVNGTSSSNKAVILAVCG--------PGDKILIDRNCHKSV-INGLVLSG--- 120 (294)
T ss_pred CCCChHHHHHHHHHHHHhC--CCCEEEEcCcHHHHHHHHHHHcCC--------CCCEEEEeCCchHHH-HHHHHHCC---
Confidence 3455677888899999995 34455 489999999999887754 667888777655433 22222222
Q ss_pred chhhhhccCCCeeEeCCCCCC--CCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHH
Q psy14484 152 FKEIYTSLLNKTYIITTPDSR--NINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVR 229 (430)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~ 229 (430)
....+++.+... .... ..|++++++++++++ +++++++.. . +.+|...+ +++|.
T Consensus 121 ---------~~~~~v~~~~~~~~~~~~--------~i~~~~l~~~l~~~~-~~k~v~l~~-p-~~~G~~~d----l~~I~ 176 (294)
T cd00615 121 ---------AVPVYLKPERNPYYGIAG--------GIPPETFKKALIEHP-DAKAAVITN-P-TYYGICYN----LRKIV 176 (294)
T ss_pred ---------CEEEEecCccCcccCcCC--------CCCHHHHHHHHHhCC-CceEEEEEC-C-CCCCEecC----HHHHH
Confidence 111223221110 0000 027899999997643 455544443 3 45787776 99999
Q ss_pred HHHHhcCCEEEEeccccCC-CCcccccccccCCCCCcee--eeecccCCCcccc-EEEEEcHHHH--HhhhccCCccccc
Q psy14484 230 EICNNYNIHLIADEIAVGC-GRTGKFFACEHAEIWPDFL--CLSKGITGGYLPL-SLVMTTDKIY--NSIYYKNNINIFL 303 (430)
Q Consensus 230 ~l~~~~gi~li~DEv~~g~-g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~~~i-g~~~~~~~~~--~~~~~~~~~~~~~ 303 (430)
++|+++|+++|+||+|... ...+. +.........|++ +++|.++| ++. |++..+.+.. +.+.. ...
T Consensus 177 ~~~~~~g~~livDeA~~~~~~~~~~-~~~~~~~~~~div~~S~hK~l~g--~~~~~~l~~~~~~~~~~~~~~-----~~~ 248 (294)
T cd00615 177 EEAHHRGLPVLVDEAHGAHFRFHPI-LPSSAAMAGADIVVQSTHKTLPA--LTQGSMIHVKGDLVNPDRVNE-----ALN 248 (294)
T ss_pred HHHHhcCCeEEEECcchhhhccCcc-cCcchhhcCCcEEEEchhcccch--HhHHHHHHhCCCcCCHHHHHH-----HHH
Confidence 9999999999999998732 12221 1111222345766 46698854 343 3344443311 11211 011
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHh--hcCHHHHHHHHHHHHHHHHH
Q psy14484 304 HSHSYSGNPLACCAALATLEIFN--KDNILQRISQDMKKITKALT 346 (430)
Q Consensus 304 ~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~~~~l~~~l~ 346 (430)
...|.+++.+.+++..++++++. ..++.+++.++.+++++.|+
T Consensus 249 ~~~ttsps~~~~asl~~a~~~~~~~g~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 249 LHQSTSPSYLILASLDVARAMMALEGKELVEELIELALYARQEIN 293 (294)
T ss_pred HHCCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHh
Confidence 12333455555555556666543 24567777888888888765
No 344
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.53 E-value=1.8e-12 Score=126.15 Aligned_cols=164 Identities=19% Similarity=0.155 Sum_probs=111.0
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
+...+....+++.++++.+ .+..++++||++|+.+++..+.. ++++||+.+..|.+.......
T Consensus 65 r~~~pt~~~le~~la~l~g--~~~~v~fsSG~~Ai~~al~~ll~--------~Gd~VI~~~~~y~~t~~~~~~------- 127 (437)
T PRK05613 65 RLTNPTVEALENRIASLEG--GVHAVAFASGQAAETAAILNLAG--------AGDHIVTSPRLYGGTETLFLV------- 127 (437)
T ss_pred CccChHHHHHHHHHHHHhC--CCeEEEeCCHHHHHHHHHHHhcC--------CCCEEEECCCccHHHHHHHHH-------
Confidence 4556788899999999985 35778888888999988876643 567888877777654211100
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
.+.....++.+++.+. |+++++++++ +++++|++|. +.|+.|.+.+ +++|.++|
T Consensus 128 --~l~~~Gi~v~~vd~~~----------------d~e~l~~~l~---~~tk~V~~e~-~~Np~~~v~d----i~~I~~la 181 (437)
T PRK05613 128 --TLNRLGIEVTFVENPD----------------DPESWQAAVQ---PNTKAFFGET-FANPQADVLD----IPAVAEVA 181 (437)
T ss_pred --HHHhcCeEEEEECCCC----------------CHHHHHHhCC---ccCeEEEEEC-CCCCCCcccC----HHHHHHHH
Confidence 1111223344554221 6788998885 4678888888 8788787777 99999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCceeeee--cccCCCccccEEEEE
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITGGYLPLSLVMT 285 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s--K~l~gG~~~ig~~~~ 285 (430)
+++|+++|+|.+++ .+.. .....+..|++++| |.++|..-.+|.+++
T Consensus 182 ~~~gi~livD~t~a-~g~~-----~~p~~~GaDivv~S~~K~l~G~gd~~gG~vv 230 (437)
T PRK05613 182 HRNQVPLIVDNTIA-TAAL-----VRPLELGADVVVASLTKFYTGNGSGLGGVLI 230 (437)
T ss_pred HHcCCeEEEECCCc-cccc-----cChHHhCCCEEEeeccceecCCCcceeEEEE
Confidence 99999999999985 2211 11112345888665 988872234555544
No 345
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.52 E-value=6.6e-12 Score=121.33 Aligned_cols=300 Identities=13% Similarity=0.102 Sum_probs=162.8
Q ss_pred HHHHHHHHHHHhhcCCC-CCeEEEcCCch-HHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchh
Q psy14484 77 KPVIKLSEKLSSLTQYK-LGHCFYGSDGA-SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKE 154 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~~~-~~~v~~~~sgt-eA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~ 154 (430)
.+..++.+.+.+.++.+ .+..+++++|| .++..++.+++.. + ++.+.||+.... |-.+.-+....+
T Consensus 105 ~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~----~-~~gd~VI~p~~t-h~S~~kAi~~~G------ 172 (444)
T TIGR03531 105 KLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHK----R-PKAKYVIWPRID-QKSCIKAISTAG------ 172 (444)
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCc----C-CCCCEEEEECcC-hHHHHHHHHHcC------
Confidence 45567777788887643 24689999999 6877777765421 1 124556665544 554444333333
Q ss_pred hhhccCCCeeEeCC---CCCCCCCCCCChhHHHHHHHHHHHHHHHhCC-CCeEEEEEccccccCCCcccCChHHHHHHHH
Q psy14484 155 IYTSLLNKTYIITT---PDSRNINKGNSANEIARCAIFDLEILLKKNH-NKIAAIIIEPLVQCAGGMIMYDSIYLKLVRE 230 (430)
Q Consensus 155 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~ 230 (430)
...++++. ++.+.. |+++|+++|++.. ..+.+++..| ....+|...+ +++|.+
T Consensus 173 ------~~pv~Vd~~~d~~~~~i------------D~e~Le~aIt~~~~kai~~Vv~Tp-~t~~~g~~dd----L~eIa~ 229 (444)
T TIGR03531 173 ------FEPRVIETVLDGDELTT------------DVEDIERAIEEIGPDNILCVLSTT-SCFAPRSPDD----IEEIAK 229 (444)
T ss_pred ------CeEEEeeeeecCcCCCc------------CHHHHHHHHHhccCCCEEEEEEcC-CcCCCcchhC----HHHHHH
Confidence 12233432 222222 8999999998543 4566666666 3333333444 999999
Q ss_pred HHHhcCCEEEEeccccCCCCcccccccccCCC-CCceeeee--cccCCCccccEEEEE-cHHHHHhhhccCCcccccccC
Q psy14484 231 ICNNYNIHLIADEIAVGCGRTGKFFACEHAEI-WPDFLCLS--KGITGGYLPLSLVMT-TDKIYNSIYYKNNINIFLHSH 306 (430)
Q Consensus 231 l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~-~~d~~~~s--K~l~gG~~~ig~~~~-~~~~~~~~~~~~~~~~~~~~~ 306 (430)
+|++||+++|+|++|......-.......... ..|++++| |.+...+ .-|+++. ++++.+.+.. . +..
T Consensus 230 la~k~gI~lIvDaAyg~~~~~~~~~~~~g~~~Grad~vv~s~hK~l~~pg-~Gg~I~~~d~el~~~i~~------~-y~g 301 (444)
T TIGR03531 230 ICANYDIPHIVNNAYGLQSNKYMELINKAIKVGRVDAVVSSTDKNFMVPV-GGAIIYSFDENFIQEISK------S-YPG 301 (444)
T ss_pred HHHHcCCEEEEECcCcCcChhhhhhhhccccccCCCeEEEeCccCCCCCC-CEEEEEECCHHHHHHHHH------h-ccC
Confidence 99999999999999973211000000011112 24766654 8766411 2355556 5677776654 1 111
Q ss_pred CCCCCHHHHHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHHHch-hcCCC-eeeEeecceEEEEEEeecCCccchhHHH
Q psy14484 307 SYSGNPLACCAALATLEIFNK---DNILQRISQDMKKITKALTSL-ITHPK-IINFRQKGMIWAFDVIIEDPEQIETFSK 381 (430)
Q Consensus 307 t~~~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~l-~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~a~ 381 (430)
... +..++.+....+. +.. .++.++..++.+++.+.|+++ ..+.. +...+....-+++.+. .-. .+. ..
T Consensus 302 ~~~-~s~~~~~~~~ll~-~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~-~~~-~~~--~~ 375 (444)
T TIGR03531 302 RAS-ASPSLDVLITLLS-LGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLS-TLK-GKD--PT 375 (444)
T ss_pred CCC-ChHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEecc-ccc-ccC--HH
Confidence 111 2233333333333 222 345566677888888888877 33332 2222222233334333 211 111 24
Q ss_pred HHHHHHHHCCcE----Eeec-------------C--------CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 382 KFFVAALKNELL----LRPI-------------G--------NTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 382 ~~~~~l~~~Gv~----~~~~-------------~--------~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
.+...|..++|- +.++ + .++-+..+..++++|||.++++|++++
T Consensus 376 ~~g~~l~~~~v~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~~ 444 (444)
T TIGR03531 376 MLGSMLYSRRVTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL 444 (444)
T ss_pred HHHHHHHhCCCCCceeecCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhcC
Confidence 566666666541 1121 0 123344455679999999999998763
No 346
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.47 E-value=1.2e-11 Score=118.33 Aligned_cols=248 Identities=17% Similarity=0.188 Sum_probs=148.3
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
+...+...++++.++++. +.+.++.++||+.|+.+++..+.. +++.||+....|.+.......
T Consensus 60 r~~~P~~~~lE~~la~le--g~~~av~~sSG~aAi~~al~all~--------~GD~Vl~~~~~yg~t~~~~~~------- 122 (384)
T PRK06434 60 RWGNPTVQAFEEKYAVLE--NAEHALSFSSGMGAITSAILSLIK--------KGKRILSISDLYGQTFYFFNK------- 122 (384)
T ss_pred CCCChhHHHHHHHHHHHh--CCCcEEEeCCHHHHHHHHHHHHhC--------CCCEEEEecCccchHHHHHHH-------
Confidence 456788889999999998 456789999999999999987654 667888877777655332211
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
..........+++.+ +.+.++ ++ ++++++|++|. +.|+++...+ +++|.++|
T Consensus 123 --~~~~~Gi~v~fvd~~-----------------~~~~~~--l~--~~~tklv~~e~-~snpt~~v~D----i~~I~~la 174 (384)
T PRK06434 123 --VLKTLGIHVDYIDTD-----------------RLNSLD--FD--PSNYDLIYAES-ITNPTLKVPD----IKNVSSFC 174 (384)
T ss_pred --HHHhcCcEEEEECCC-----------------Chhhee--ec--CCCeeEEEEEc-CCCCCceeec----HHHHHHHH
Confidence 111222334455443 122222 32 34789999999 8888886666 99999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCceeeee--cccCCCc-cccEEEEE-cHHHHHhhhccCCcccccccCCC
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITGGY-LPLSLVMT-TDKIYNSIYYKNNINIFLHSHSY 308 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s--K~l~gG~-~~ig~~~~-~~~~~~~~~~~~~~~~~~~~~t~ 308 (430)
++++ +++|.++. -... ....+...|++++| |.++|.. .-.|+++. ++++.+.+.. .......
T Consensus 175 ~~~~--lvVD~t~~-s~~~-----~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~------~~~~~G~ 240 (384)
T PRK06434 175 HEND--VIVDATFA-SPYN-----QNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVE------RRKTLGS 240 (384)
T ss_pred HHcC--eEEECCCC-Cccc-----CCchhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHH------HHHhcCC
Confidence 9998 46799863 2111 22234567888776 8887731 22455655 3455554432 1111122
Q ss_pred CCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhc-----CCCee----eEeecceEEEEEEeecCCccchhH
Q psy14484 309 SGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-----HPKII----NFRQKGMIWAFDVIIEDPEQIETF 379 (430)
Q Consensus 309 ~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~-----~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~ 379 (430)
..+++.++.+..-|+.+ +...++-.+++..+.+.|+..+. +|+.. ...+-|.++.|++. + .+.
T Consensus 241 ~~~~~~A~l~~~gL~tL--~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~-~-----~~~ 312 (384)
T PRK06434 241 NPDPIQAYLALRGLKTL--GLRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELR-S-----MED 312 (384)
T ss_pred CCCHHHHHHHHhCCCcH--HHHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEEC-C-----HHH
Confidence 23455443333333322 23455666677777777765422 22211 12466889999987 3 111
Q ss_pred HHHHHHHH
Q psy14484 380 SKKFFVAA 387 (430)
Q Consensus 380 a~~~~~~l 387 (430)
+.+|.+.|
T Consensus 313 ~~~f~~~l 320 (384)
T PRK06434 313 VHKFIRNL 320 (384)
T ss_pred HHHHHHhC
Confidence 34566655
No 347
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.44 E-value=3.9e-11 Score=116.81 Aligned_cols=280 Identities=18% Similarity=0.089 Sum_probs=163.3
Q ss_pred CHHHHHHHHHHHhhc-cccccCCCCCHHHHHHHHHHHhhcCCC-CCeEEEcCCchHHHHHHHHHHHHhhhhc-----CCC
Q psy14484 52 NSYINKALKNQLNKL-EHVMLSNLTHKPVIKLSEKLSSLTQYK-LGHCFYGSDGASAVEVALKMSFHYWYNK-----GFL 124 (430)
Q Consensus 52 ~p~v~~a~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~sgteA~~~al~~~~~~~~~~-----g~~ 124 (430)
++...+++...+.+- .....+........++..+++++++.+ ...-.||+||||||..|+.+++..++.+ +.+
T Consensus 75 ~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~ 154 (460)
T COG0076 75 PPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKP 154 (460)
T ss_pred HHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhccccc
Confidence 344555555555431 211222244466678888999998643 2257999999999999999999876421 112
Q ss_pred CCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC-CCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeE
Q psy14484 125 NKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD-SRNINKGNSANEIARCAIFDLEILLKKNHNKIA 203 (430)
Q Consensus 125 ~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~ 203 (430)
.+...|+.+...|-+. .+....+..+...++... .++. |++++++++++. +.
T Consensus 155 ~~~P~ii~s~~aH~s~------------~Kaa~~lG~~~~~v~~~~~~~~i------------d~~~l~~~i~~~---t~ 207 (460)
T COG0076 155 GGKPNIVCSETAHFSF------------EKAARYLGLGLRRVPTVPTDYRI------------DVDALEEAIDEN---TI 207 (460)
T ss_pred CCCCeEEecCcchhHH------------HHHHHHhCCCceeEEeccCcccc------------CHHHHHHHHHhh---cc
Confidence 2223555666677553 232233334444444332 3333 899999999864 33
Q ss_pred E--EEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCc--ccccccccCCC-CCceeeee--cccCCC
Q psy14484 204 A--IIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRT--GKFFACEHAEI-WPDFLCLS--KGITGG 276 (430)
Q Consensus 204 ~--vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~--g~~~~~~~~~~-~~d~~~~s--K~l~gG 276 (430)
. |+... ...++|.+-| +++|.++|+++++++|||.++.|+... .....+ ..++ ..|=++++ |....-
T Consensus 208 ~g~vV~~a-GtT~~G~iDd----i~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~-~f~l~~vdSIt~d~HK~g~aP 281 (460)
T COG0076 208 GGVVVGTA-GTTDTGSIDD----IEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRW-DFGLEGVDSITVDGHKYGLAP 281 (460)
T ss_pred CceEEEEe-cCCCCCccCC----HHHHHHHHHHcCCcEEEEccccceeecccCccchh-hcCCCCceEEEECcccccCCC
Confidence 3 66666 7778888888 999999999999999999999887321 110000 0122 24555555 543322
Q ss_pred ccccEEEEEcHH--HHHhhhcc-----C-CcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHH---HHHHHHHHHHHHH
Q psy14484 277 YLPLSLVMTTDK--IYNSIYYK-----N-NINIFLHSHSYSGNPLACCAALATLEIFNKDNILQ---RISQDMKKITKAL 345 (430)
Q Consensus 277 ~~~ig~~~~~~~--~~~~~~~~-----~-~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~---~~~~~~~~l~~~l 345 (430)
.+.|+++.+.+ +.+.+... + ....+...++.++ ...++.+..+..+..+++.+ +..++.+++.+.|
T Consensus 282 -~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~--~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l 358 (460)
T COG0076 282 -IGCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPG--RQALALYANLRRLGREGYRKLLDRTLELARYLAEEL 358 (460)
T ss_pred -CCceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccch--HHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHH
Confidence 57888988754 44433320 0 1111122222222 24456667777776555554 4457888888888
Q ss_pred HchhcCCCeeeEeecceEEEEEEe
Q psy14484 346 TSLITHPKIINFRQKGMIWAFDVI 369 (430)
Q Consensus 346 ~~l~~~~~~~~~~~~g~~~~~~~~ 369 (430)
+++..+.. -..+....++|..+
T Consensus 359 ~~~~~~e~--~~~p~l~~V~fr~~ 380 (460)
T COG0076 359 EKLGDFEL--VNEPELPIVAFRLK 380 (460)
T ss_pred HhCCCcEe--ecCCccceEEEEcC
Confidence 77622222 12344555666654
No 348
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.44 E-value=4.3e-10 Score=100.11 Aligned_cols=341 Identities=12% Similarity=0.120 Sum_probs=206.4
Q ss_pred EEECCCCEEEecccccccccCCCCCHHHHHHHHH-HHhhcccc---ccC---CCCCHHHHHHHHHHHhhcCCCCCeEEEc
Q psy14484 28 LIDVSGKRYLDAISSWWVNLFGHSNSYINKALKN-QLNKLEHV---MLS---NLTHKPVIKLSEKLSSLTQYKLGHCFYG 100 (430)
Q Consensus 28 ~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~-~~~~~~~~---~~~---~~~~~~~~~l~~~l~~~~~~~~~~v~~~ 100 (430)
+.+.+|--||| .++||..++.+.+..++ ..++.... ..+ ......-+.+..+|+.+.++...+|..+
T Consensus 26 f~lp~~viyLd------gnSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~~~Evvv~ 99 (407)
T COG3844 26 FALPGGVIYLD------GNSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGARAGEVVVT 99 (407)
T ss_pred ccCCCCeEEee------ccccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhcCCCCceEEe
Confidence 34556678888 36788666566555554 33433221 111 1222455677888888999889999999
Q ss_pred CCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcC-CCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCC
Q psy14484 101 SDGASAVEVALKMSFHYWYNKGFLNKKKFICLQN-SYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNS 179 (430)
Q Consensus 101 ~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~-~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (430)
.|-+--+...+.++.+.. .+++||+++. +|.--...+..+... .....+...+.
T Consensus 100 dtts~nl~k~L~aalr~~------~~r~vIv~E~~~fpTdly~a~g~~~~-------~~~~~~~~~~~------------ 154 (407)
T COG3844 100 DTTSINLFKVLAAALRPQ------EGRRVIVSEGDNFPTDLYIAEGLADL-------LGIGYDLEGVI------------ 154 (407)
T ss_pred CCcchHHHHHHHHHhccC------CCceEEeecCCCCCcchhhhcchhhh-------hcccccceeee------------
Confidence 888777666666665532 3455666654 333211111110000 00000111111
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccccccc
Q psy14484 180 ANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEH 259 (430)
Q Consensus 180 ~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~ 259 (430)
.+.+++++++ +++++|.++. |+.-+|.... +.+|-+++++||++++.|=+|+ .|. ...+.
T Consensus 155 -------~P~~~~~~~~---dd~AvV~L~~-V~y~TGql~d----m~aiT~~AH~~galv~wDLAHs-aGa----vp~~L 214 (407)
T COG3844 155 -------APRALEEAIT---DDVAVVLLSH-VNYKTGQLLD----MRAITALAHQHGALVGWDLAHS-AGA----VPVDL 214 (407)
T ss_pred -------ChHHHHHhhc---cceEEEEecc-ccccccceee----HHHHHHHHHhcCceEEeehhcc-cCC----cceee
Confidence 3457777775 7899999999 9999998877 9999999999999999998887 322 12232
Q ss_pred CCCCCcee--eeecccCCCccccEEEEEcHHHHHhhhcc-----CCcccccccCCC------------CCCHHHHHHHHH
Q psy14484 260 AEIWPDFL--CLSKGITGGYLPLSLVMTTDKIYNSIYYK-----NNINIFLHSHSY------------SGNPLACCAALA 320 (430)
Q Consensus 260 ~~~~~d~~--~~sK~l~gG~~~ig~~~~~~~~~~~~~~~-----~~~~~~~~~~t~------------~~~~~~~~aa~~ 320 (430)
-....|+. |--|-|.||.-..+++++.++..+...+. +..+++.....| +.+.+++++...
T Consensus 215 h~~gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~ 294 (407)
T COG3844 215 HAAGADFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEG 294 (407)
T ss_pred cccCCCeeeeeeceeccCCCCCceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhh
Confidence 23334544 45588887644577788776654443221 122222222111 112356666667
Q ss_pred HHHHHhh---cCHHHHHHHHHHHHHHHHHch-hcCCC--ee--eEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCc
Q psy14484 321 TLEIFNK---DNILQRISQDMKKITKALTSL-ITHPK--II--NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNEL 392 (430)
Q Consensus 321 ~l~~~~~---~~~~~~~~~~~~~l~~~l~~l-~~~~~--~~--~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv 392 (430)
+|++..+ .+++++.-.+.++|.+.++.. ..++. .+ .-..+|.-+.+..+ . +.++++.|.++||
T Consensus 295 aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp-~--------~~~V~qaLi~rGV 365 (407)
T COG3844 295 ALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHP-H--------GYQVMQALIDRGV 365 (407)
T ss_pred hhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecC-c--------HHHHHHHHHHcCc
Confidence 7776644 345556666777777777654 22222 11 11234444444443 2 4689999999999
Q ss_pred EEee-cCCEEEEeC-CCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 393 LLRP-IGNTVYLMP-PYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 393 ~~~~-~~~~lR~~~-~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+.-- .++.+||.| +++.+-+|+-..++.|++++++.
T Consensus 366 igD~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 366 IGDFREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred cccccCCCeeeecCccceechhHHHHHHHHHHHHHHhh
Confidence 8654 358999876 45678999999999999999865
No 349
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.40 E-value=8.8e-11 Score=110.81 Aligned_cols=290 Identities=15% Similarity=0.173 Sum_probs=170.8
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
+..++....+++.++++- +.+..+.++||..|+..++..... ++++||..+..|.+....+..+
T Consensus 59 R~~nPT~~~lE~~~a~LE--g~~~~~afsSGmaAI~~~~l~ll~--------~GD~vl~~~~~YG~t~~~~~~~------ 122 (396)
T COG0626 59 RTGNPTRDALEEALAELE--GGEDAFAFSSGMAAISTALLALLK--------AGDHVLLPDDLYGGTYRLFEKI------ 122 (396)
T ss_pred cCCCccHHHHHHHHHHhh--CCCcEEEecCcHHHHHHHHHHhcC--------CCCEEEecCCccchHHHHHHHH------
Confidence 455778889999999887 567889999999999999887775 5789999998897753332221
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
+..+..++.++... +.+++++++. ++++++|++|+ +.|+.--+.. +.+|.++|
T Consensus 123 ---l~~~gi~~~~~d~~-----------------~~~~~~~~~~--~~~tk~v~lEt-PsNP~l~v~D----I~~i~~~A 175 (396)
T COG0626 123 ---LQKFGVEVTFVDPG-----------------DDEALEAAIK--EPNTKLVFLET-PSNPLLEVPD----IPAIARLA 175 (396)
T ss_pred ---HHhcCeEEEEECCC-----------------ChHHHHHHhc--ccCceEEEEeC-CCCccccccc----HHHHHHHH
Confidence 11122333333322 4456666664 25899999999 9998876666 99999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCCcccc-EEEEEcH-HHHHhhhccCCcccccccCCC
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPL-SLVMTTD-KIYNSIYYKNNINIFLHSHSY 308 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~~~i-g~~~~~~-~~~~~~~~~~~~~~~~~~~t~ 308 (430)
+++|+++++|++...- ..++.+....|++ +..|.++|+.=-+ |.++++. ++.+.+... . ....+.
T Consensus 176 ~~~g~~vvVDNTfatP------~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~--~-~~~~G~-- 244 (396)
T COG0626 176 KAYGALVVVDNTFATP------VLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFA--Q-RANTGA-- 244 (396)
T ss_pred HhcCCEEEEECCcccc------cccChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHH--H-HhhcCC--
Confidence 9999999999986521 1233344457877 4669999853224 4455454 444444220 0 000111
Q ss_pred CCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchh-----cCCCee----------eEeecceEEEEEEeecCC
Q psy14484 309 SGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----THPKII----------NFRQKGMIWAFDVIIEDP 373 (430)
Q Consensus 309 ~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~-----~~~~~~----------~~~~~g~~~~~~~~~~~~ 373 (430)
...|.-+.-.+-.|+.+. -..++..+++..+.+.|++-+ .+|... ...+.|.++.|++. ++
T Consensus 245 ~l~p~dA~l~lRGlkTL~--~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~-~~- 320 (396)
T COG0626 245 VLSPFDAWLLLRGLRTLA--LRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELK-NE- 320 (396)
T ss_pred CCCHHHHHHHHhccchHH--HHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeC-Ch-
Confidence 223333332222222221 123444455555555555421 112110 12358899999998 53
Q ss_pred ccchhHHHHHHHHHHHCC----------cEEee------------------cCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 374 EQIETFSKKFFVAALKNE----------LLLRP------------------IGNTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 374 ~~~~~~a~~~~~~l~~~G----------v~~~~------------------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
+.+.+|.+.|.--. ++..| .++-+|+++.. |+++.+++.|++++
T Consensus 321 ----~~~~~f~~~L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGl----Ed~eDLi~Dl~~Al 392 (396)
T COG0626 321 ----EAAKKFLDSLKLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGL----EDVEDLIADLEQAL 392 (396)
T ss_pred ----HHHHHHHHhCCccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHH
Confidence 11456666653221 11111 13678997664 45666666666666
Q ss_pred HHh
Q psy14484 426 NEV 428 (430)
Q Consensus 426 ~~~ 428 (430)
+.+
T Consensus 393 ~~~ 395 (396)
T COG0626 393 AKA 395 (396)
T ss_pred Hhh
Confidence 543
No 350
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.40 E-value=1.3e-10 Score=110.44 Aligned_cols=317 Identities=10% Similarity=0.041 Sum_probs=179.9
Q ss_pred CHH-HHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCC--eEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcE
Q psy14484 52 NSY-INKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLG--HCFYGSDGASAVEVALKMSFHYWYNKGFLNKKK 128 (430)
Q Consensus 52 ~p~-v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~--~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~ 128 (430)
+|. ..+++.+.+-..+ ++.....+...+..+.|.++++.+.+ -++++.|||.++++++..+... ++++
T Consensus 15 ~~~~~~~~~~~~~~~~~--HRs~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~-------~g~~ 85 (374)
T TIGR01365 15 RPGWSIEELKNAPLGRS--HRSKLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGC-------RGVD 85 (374)
T ss_pred CchhhHHHHhhhhcccC--cCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCC-------CCCe
Confidence 355 4455554332222 22223335666778888888863222 3677889999999999987631 4456
Q ss_pred EEEEcCCCCCcc-h-hhhccCCCccchhhhhccCC-CeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEE
Q psy14484 129 FICLQNSYHGET-L-GALAVTNIQSFKEIYTSLLN-KTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAI 205 (430)
Q Consensus 129 vl~~~~~yhg~~-~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~v 205 (430)
+++. + +.|.. . ..... +.. ++..+..+... .. ++++++. + ..+.
T Consensus 86 vLv~-g-~FG~r~~~eia~~------------~g~~~v~~l~~~~g~-~~-----------~~~~ve~--~---~~v~-- 132 (374)
T TIGR01365 86 VLAW-E-SFGKGWVTDVTKQ------------LKLPDVRVLEAEYGK-LP-----------DLKKVDF--K---NDVV-- 132 (374)
T ss_pred EEEE-C-HHHHHHHHHHHHh------------cCCCCcEEEcCCCCC-CC-----------CHHHcCC--C---CCEE--
Confidence 6653 3 33432 2 11111 111 12233333211 11 6666652 1 2333
Q ss_pred EEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeee--cccCCCccccEEE
Q psy14484 206 IIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITGGYLPLSLV 283 (430)
Q Consensus 206 i~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s--K~l~gG~~~ig~~ 283 (430)
+.. .-.++|...| ++++...+ +++++|+|.+-+ +|- ..+.++ + .|++..| |+|++- -.+|.+
T Consensus 133 -~vh-nETSTGv~np----v~~i~~~~--~~~lliVDavSs-~g~--~~l~~d--~--iDv~~tgsQK~L~~p-pGls~v 196 (374)
T TIGR01365 133 -FTW-NGTTSGVRVP----NGDFIPAD--REGLTICDATSA-AFA--QDLDYH--K--LDVVTFSWQKVLGGE-GAHGML 196 (374)
T ss_pred -Eec-CCCchheecc----cccccccc--CCCcEEEEccch-hcC--CCCChh--H--CcEEEEechhccCCC-CceEEE
Confidence 333 3346787776 54444222 589999998865 542 223333 2 6777655 999873 248899
Q ss_pred EEcHHHHHhhhccCC----cc------------ccc-ccCCCCCCHHHHHHHHHHHHHHhhc----CHHHHHHHHHHHHH
Q psy14484 284 MTTDKIYNSIYYKNN----IN------------IFL-HSHSYSGNPLACCAALATLEIFNKD----NILQRISQDMKKIT 342 (430)
Q Consensus 284 ~~~~~~~~~~~~~~~----~~------------~~~-~~~t~~~~~~~~~aa~~~l~~~~~~----~~~~~~~~~~~~l~ 342 (430)
+.+++.++....... .+ ... ....++++..++.++..+|+.++++ +..++.+++++.++
T Consensus 197 ~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~ 276 (374)
T TIGR01365 197 ILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLE 276 (374)
T ss_pred EECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 999988766542100 01 001 1223333444666667777655443 34566677888888
Q ss_pred HHHHchhcCCCeee--EeecceEEEEEEeecCC------ccchhHHHHHHHHHHHCCcEEeec-----CCEEEEeCCCCC
Q psy14484 343 KALTSLITHPKIIN--FRQKGMIWAFDVIIEDP------EQIETFSKKFFVAALKNELLLRPI-----GNTVYLMPPYIL 409 (430)
Q Consensus 343 ~~l~~l~~~~~~~~--~~~~g~~~~~~~~~~~~------~~~~~~a~~~~~~l~~~Gv~~~~~-----~~~lR~~~~~~~ 409 (430)
+.++++.....+.. .........+.+. .+. ...-+++..+.+.|.++|+.+.++ ++.+||.-.-.+
T Consensus 277 ~~l~~lg~l~~~~~~~~~rS~tvt~v~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i 355 (374)
T TIGR01365 277 AFVAKNNWIHFLAETPEIRSNTSVCLKVV-DPAIDALDEDAQADFAKELISTLEKEGVAYDIGSYRDAPSGLRIWCGATV 355 (374)
T ss_pred HHHHHCCCcccCCCChhhcCCCeEEEEeC-CccccccccchhhHHHHHHHHHHHHCCEEEeccccccCCCceEEecCCcC
Confidence 88887731222221 1122334445553 221 111223467999999999988865 478999988889
Q ss_pred CHHHHHHHHHHHHHHHHH
Q psy14484 410 NKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 410 t~e~i~~~~~~l~~~l~~ 427 (430)
++++++.+++.|.-++.+
T Consensus 356 ~~~di~~l~~~l~~~~~~ 373 (374)
T TIGR01365 356 EKSDLECLCPWLDWAFAL 373 (374)
T ss_pred CHHHHHHHHHHHHHHHhc
Confidence 999999999999877654
No 351
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.39 E-value=2.2e-10 Score=104.84 Aligned_cols=305 Identities=13% Similarity=0.131 Sum_probs=164.5
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHH-HHHHHHHhhhhcC------CCCCcEEEEEcCCCCCcchhhhcc
Q psy14484 74 LTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEV-ALKMSFHYWYNKG------FLNKKKFICLQNSYHGETLGALAV 146 (430)
Q Consensus 74 ~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~-al~~~~~~~~~~g------~~~~~~vl~~~~~yhg~~~~~~~~ 146 (430)
+..+-..++++.+++++++.+++++...++|-.++. ++.-+... ...| +.++.+.+.+.|+|--|...+-..
T Consensus 66 G~l~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~-G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~ 144 (425)
T PF12897_consen 66 GGLDGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLH-GVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHF 144 (425)
T ss_dssp S-SS--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH---TT-SS-GGGSS--EEEEEES--HHHHHHHHHC
T ss_pred CccCChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhc-CCCCCCCCchhccCceEEecCCCchHHHHHHHhh
Confidence 444556688888999999899998887776666554 33222211 1111 124678999999997664443332
Q ss_pred CCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHH
Q psy14484 147 TNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLK 226 (430)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~ 226 (430)
++..+++|-...++ |+|.+|+.+.+ .+.++.++|-|...|++| +.++.+-.+
T Consensus 145 ---------------Giemi~VpM~~dGP-----------DmD~Ve~LV~~-D~svKGiWcVP~ySNPtG-~tySde~vr 196 (425)
T PF12897_consen 145 ---------------GIEMIPVPMTEDGP-----------DMDMVEELVAE-DPSVKGIWCVPKYSNPTG-ITYSDEVVR 196 (425)
T ss_dssp ---------------T-EEEEEEEETTEE------------HHHHHHHTHT-STTEEEEEE-SSS-TTT------HHHHH
T ss_pred ---------------CcEEEecCCCCCCC-----------CHHHHHHHHhc-CCccceEEeCCCccCCCC-ccCCHHHHH
Confidence 22345555444444 99999999865 468999999995555556 889999999
Q ss_pred HHHHH-HHhcCCEEEEecccc--CCCCccc-cc------ccccCCCCCce----eeeec-ccCCCccccEEEEEcHHHHH
Q psy14484 227 LVREI-CNNYNIHLIADEIAV--GCGRTGK-FF------ACEHAEIWPDF----LCLSK-GITGGYLPLSLVMTTDKIYN 291 (430)
Q Consensus 227 ~l~~l-~~~~gi~li~DEv~~--g~g~~g~-~~------~~~~~~~~~d~----~~~sK-~l~gG~~~ig~~~~~~~~~~ 291 (430)
++.++ +...+..++.|.+|+ .+..... .- .....| .||. .+.|| .+.| ..|+++..+++-++
T Consensus 197 rlA~m~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AG-npdrv~~F~STSKITf~G--aGva~~aaS~~Nl~ 273 (425)
T PF12897_consen 197 RLAAMKTAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAG-NPDRVYVFASTSKITFPG--AGVAFFAASEANLA 273 (425)
T ss_dssp HHHHS--SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHHTT--TTSEEEEEESTTTS-TT--SS-EEEEE-HHHHH
T ss_pred HHhcCCcCCcCeEEEeecCceEeeccccccchhhhHHHHHHHHcC-CCCeEEEEecccccccCC--cceeeeecCHHHHH
Confidence 99988 456899999999987 1211111 00 011122 3553 36788 4555 46999999998777
Q ss_pred hhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhc-CHHHHHHHHHHHHHHHHH--------chh-cCCCeeeEeec-
Q psy14484 292 SIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD-NILQRISQDMKKITKALT--------SLI-THPKIINFRQK- 360 (430)
Q Consensus 292 ~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~-~~~~~~~~~~~~l~~~l~--------~l~-~~~~~~~~~~~- 360 (430)
.+.. .....|.+.+-+.+..=..-+.. .+ ++.+++++.++.++-+++ +|. .........++
T Consensus 274 ~~~~------~~~~~tIgpdKvNQLRHvrff~d--~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~G 345 (425)
T PF12897_consen 274 WIKK------HLSVQTIGPDKVNQLRHVRFFKD--AEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKG 345 (425)
T ss_dssp HHHH------HHHHH-S---HHHHHHHHHHHHS--HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SB
T ss_pred HHHH------HhcCceeCccHHHHHHHHHHhcC--hhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCC
Confidence 7665 22334555565655443333321 13 566677666666655443 232 22343444444
Q ss_pred ceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-----------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 361 GMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----------GNTVYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 361 g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-----------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
|.|+.++.. ++ + |.++.+.+++.||...+. ...||+.|+ .-+.+|++.+++.+.-++.
T Consensus 346 GYFIsld~~-~G---~---AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS-~P~leel~~Am~~~~~cv~ 414 (425)
T PF12897_consen 346 GYFISLDVL-DG---T---AKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPS-YPSLEELETAMDVFATCVK 414 (425)
T ss_dssp SS-EEEEES-TT-------HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--S-SS-HHHHHHHHHHHHHHHH
T ss_pred ceEEEEecC-CC---h---HHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCC-CCCHHHHHHHHHHHHHHHH
Confidence 556666665 42 2 688999999999999973 258999988 5678899999988866553
No 352
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.39 E-value=8.5e-11 Score=111.14 Aligned_cols=350 Identities=13% Similarity=0.081 Sum_probs=189.2
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVAL 111 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al 111 (430)
....+||+.|-.++ +...++..+|+.. +.. .+..++...+|.+..++++ +.+.++++.+|..+...++
T Consensus 39 s~dV~IDLrSDTgT---~apS~~m~aAM~~----GDD---~Y~gdpSv~~Lee~vael~--G~E~alpthqGRgaE~Il~ 106 (467)
T TIGR02617 39 SEDVFIDLLTDSGT---GAVTQSMQAAMMR----GDE---AYSGSRSYYALAESVKNIF--GYQYTIPTHQGRGAEQIYI 106 (467)
T ss_pred CCCeEEECccCCCC---CCCCHHHHHHHHc----CCc---ccccCchHHHHHHHHHHHh--CCceEEECCCCchHHHHHH
Confidence 45678999997554 2245677777764 322 1345667779999999999 7788999999999999998
Q ss_pred HHHHHhhhhcCCCCCcEEE------EEcCCCCCcch-hhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHH
Q psy14484 112 KMSFHYWYNKGFLNKKKFI------CLQNSYHGETL-GALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA 184 (430)
Q Consensus 112 ~~~~~~~~~~g~~~~~~vl------~~~~~yhg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (430)
+..+.. +++.+. ++...||-.+. +...+++...... ...+..-.+.++.+.+.
T Consensus 107 ~~~~~~-------~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l----~~~ea~~~~~~~~fkG~--------- 166 (467)
T TIGR02617 107 PVLIKK-------REQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNV----YTKEAFDTGVRYDFKGN--------- 166 (467)
T ss_pred Hhhccc-------ccccccccccccccceEEEEecchHHHHHcCceeecc----cchhhcccccCCCCCCC---------
Confidence 877641 112121 11223333221 2222233111000 00000000011111111
Q ss_pred HHHHHHHHHHHHhCC-CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc----CC------CCccc
Q psy14484 185 RCAIFDLEILLKKNH-NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV----GC------GRTGK 253 (430)
Q Consensus 185 ~~d~~~le~~l~~~~-~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~----g~------g~~g~ 253 (430)
-|++.|++.|++++ +++..+.++- .+|..|..+.+.+.++++.++|++||+.+++|-+-- -| +..+.
T Consensus 167 -~dl~~le~~I~~~g~~~i~~v~~tl-t~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~ 244 (467)
T TIGR02617 167 -FDLEGLERGIEEVGPNNVPYIVATI-TCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNW 244 (467)
T ss_pred -cCHHHHHHHHhhcCCCCceeeeeeE-EEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCC
Confidence 28999999998752 4666666665 666667788899999999999999999999996531 01 11111
Q ss_pred c---cccccCCCCCcee--eeecccCCCccccEEEE-EcHH----HHHhhhccCCcccccccCCCCCCHHHHHHHHH-HH
Q psy14484 254 F---FACEHAEIWPDFL--CLSKGITGGYLPLSLVM-TTDK----IYNSIYYKNNINIFLHSHSYSGNPLACCAALA-TL 322 (430)
Q Consensus 254 ~---~~~~~~~~~~d~~--~~sK~l~gG~~~ig~~~-~~~~----~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~-~l 322 (430)
. .+.+... ..|.+ |+||.++ .|+|.++ ++++ +.+.... ..-.+....|+++-.---..|++ .|
T Consensus 245 si~eI~rE~~~-~aDsvt~slsKglg---ApvGg~Lag~d~~~~~l~~~~~~--~~i~~EGf~tYGGlagrd~ea~a~Gl 318 (467)
T TIGR02617 245 SIEQITRETYK-YADMLAMSAKKDAM---VPMGGLLCFKDDSFFDVYTECRT--LCVVQEGFPTYGGLEGGAMERLAVGL 318 (467)
T ss_pred CHHHHHHHhhc-cCCEEEEEcCCCCC---CcccceEEecchhHHHHHHHHHh--hcccccCCcCcCchhHHHHHHHHhhh
Confidence 0 0001111 24655 5668765 5877554 4443 2222221 01111223466553321112222 34
Q ss_pred HHHhhcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEee--cCCccchhH-HHHHHHHHH-HCCcEEee--
Q psy14484 323 EIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVII--EDPEQIETF-SKKFFVAAL-KNELLLRP-- 396 (430)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~-a~~~~~~l~-~~Gv~~~~-- 396 (430)
+..-++++..+--...++|.++|.+. +.|.+. .-|-+. .++-.. +... ..+| +..++-+|. +-||-...
T Consensus 319 ~e~~~~~yl~~ri~qv~yl~~~L~~~-Gvpi~~-~Gghav--~iDa~~~lphip-~~~fpa~al~~~ly~~~GiR~~e~G 393 (467)
T TIGR02617 319 YDGMNLDWLAYRINQVQYLVNGLEEI-GVVCQQ-AGGHAA--FVDAGKLLPHIP-ADQFPAHALACELYKVAGIRAVEIG 393 (467)
T ss_pred hhcccHHHHHHHHHHHHHHHHHHHhC-CCcEEe-cCccEE--EEehhhhCCCCC-hhhCcHHHHHHHHHHHcCcceEeec
Confidence 43334455554445677888888775 455543 333222 232210 0000 1111 345555553 33553221
Q ss_pred --------c--------CCEEEEeCCCCC-CHHHHHHHHHHHHHHHH
Q psy14484 397 --------I--------GNTVYLMPPYIL-NKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 397 --------~--------~~~lR~~~~~~~-t~e~i~~~~~~l~~~l~ 426 (430)
. -..+|+.++.-. |.+++|...+++..+.+
T Consensus 394 ~~~~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~ 440 (467)
T TIGR02617 394 SLLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKE 440 (467)
T ss_pred ceecccCCCCCccCCCccceeeeccccccccHhHHHHHHHHHHHHHh
Confidence 0 146788887765 99999999999988875
No 353
>KOG0053|consensus
Probab=99.39 E-value=2.3e-10 Score=106.61 Aligned_cols=190 Identities=12% Similarity=0.114 Sum_probs=129.9
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
+...+....+.+.++++. +.++++.++||..|...|+..++. ..++||.+...|.|.......
T Consensus 73 r~~nPt~~~le~~iaal~--ga~~~l~fsSGmaA~~~al~~L~~--------~g~~iV~~~~~Y~gT~~~l~~------- 135 (409)
T KOG0053|consen 73 RSGNPTRDVLESGIAALE--GAAHALLFSSGMAAITVALLHLLP--------AGDHIVATGDVYGGTLRILRK------- 135 (409)
T ss_pred cCCCCchHHHHHHHHHHh--CCceEEEecccHHHHHHHHHHhcC--------CCCcEEEeCCCcccHHHHHHH-------
Confidence 344567778888888887 566799999999999999998874 678899999999886432221
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
.......+..++.. .+++.+++++. +++.+|++|. +.|+...++. +++|.++|
T Consensus 136 --~~~~~gie~~~vd~-----------------~~~~~~~~~i~---~~t~~V~~ES-PsNPll~v~D----I~~l~~la 188 (409)
T KOG0053|consen 136 --FLPKFGGEGDFVDV-----------------DDLKKILKAIK---ENTKAVFLES-PSNPLLKVPD----IEKLARLA 188 (409)
T ss_pred --HHHHhCceeeeech-----------------hhHHHHHHhhc---cCceEEEEEC-CCCCcccccc----HHHHHHHH
Confidence 11111222333322 26677777775 5899999999 9999885555 99999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCceee--eecccCCCccc-cEEEEEc-HHHHHhhhccCCcccccccCCC
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGGYLP-LSLVMTT-DKIYNSIYYKNNINIFLHSHSY 308 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~--~sK~l~gG~~~-ig~~~~~-~~~~~~~~~~~~~~~~~~~~t~ 308 (430)
+++|+++++|+...+.. -++.+.+..||++ ..|.++|+.=- .|.++.+ +++...+.. ....-.+
T Consensus 189 ~~~g~~vvVDnTf~~p~------~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~------~~~~lg~ 256 (409)
T KOG0053|consen 189 HKYGFLVVVDNTFGSPY------NQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKF------LQEDLGW 256 (409)
T ss_pred hhCCCEEEEeCCcCccc------ccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHH------HHHHhcC
Confidence 99999999999876431 2334445578885 56999984323 3455564 677766654 2223334
Q ss_pred CCCHHHHHHH
Q psy14484 309 SGNPLACCAA 318 (430)
Q Consensus 309 ~~~~~~~~aa 318 (430)
..+|..+.-.
T Consensus 257 ~~~p~~~~ll 266 (409)
T KOG0053|consen 257 CEDPFDLFLL 266 (409)
T ss_pred CCCHHHHHHH
Confidence 5566655433
No 354
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.39 E-value=5.4e-13 Score=122.50 Aligned_cols=198 Identities=17% Similarity=0.236 Sum_probs=123.4
Q ss_pred CCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEE
Q psy14484 51 SNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFI 130 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl 130 (430)
.+|++.+++.+. ..+.. .+..++...++++.+++++ +.+.++|++|||.||..+++..+. +...||
T Consensus 7 ~~~~m~~a~~~a-~~gd~---~Yg~D~~~~~l~~~i~~l~--g~e~a~f~~sGT~An~~al~~~~~--------~~~~vi 72 (290)
T PF01212_consen 7 PTPAMLEAMAAA-NVGDD---AYGEDPTTARLEERIAELF--GKEAALFVPSGTMANQLALRAHLR--------PGESVI 72 (290)
T ss_dssp S-HHEEHHHHHT-TSB-C---CTTSSHHHHHHHHHHHHHH--TSSEEEEESSHHHHHHHHHHHHHH--------TTEEEE
T ss_pred CCHHHHHHHHcc-ccCCc---ccCCChhHHHHHHHHHHHc--CCCEEEEeCCCChHHHHHHHHHHh--------cCCcee
Confidence 689999999443 33222 3566788899999999999 667788999999999999998885 556666
Q ss_pred EEcCCCCCc--chhhh-ccCCCccchhhhhccCCCeeEeCCCCCC-CCCCCCChhHHHHHHHHHHHHHHHhC---CCCeE
Q psy14484 131 CLQNSYHGE--TLGAL-AVTNIQSFKEIYTSLLNKTYIITTPDSR-NINKGNSANEIARCAIFDLEILLKKN---HNKIA 203 (430)
Q Consensus 131 ~~~~~yhg~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~~ 203 (430)
.-+. .|-+ ..++. .. .+...++++... ... ++++|++.+.++ ..+++
T Consensus 73 ~~~~-aHi~~~E~ga~~~~--------------~G~~~~~l~~~~~G~l-----------~~~~l~~~~~~~~~h~~~~~ 126 (290)
T PF01212_consen 73 CADT-AHIHFDETGAIEEL--------------SGAKLIPLPSDDDGKL-----------TPEDLEAAIEEHGAHHPQPA 126 (290)
T ss_dssp EETT-EHHHHSSTTHHHHH--------------TTCEEEEEBECTGTBB------------HHHHHHHHHHHTGTSGGEE
T ss_pred cccc-ceeeeeccchhhHh--------------cCcEEEECCCcccCCC-----------CHHHHHHHhhhccccCCCcc
Confidence 5443 3322 11111 11 222334444333 222 889999999884 35789
Q ss_pred EEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC--CCCcccccccccCCCCCceeeeecccCCCccccE
Q psy14484 204 AIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVG--CGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLS 281 (430)
Q Consensus 204 ~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g--~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig 281 (430)
+|.+|. .++..|..+++.+.+++|.++|++||+.|++|-+--. ....+. ......-..|.+++|-.-++| .+.|
T Consensus 127 ~v~le~-t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~--~~~e~~~~~D~v~~~~tK~~g-~~~G 202 (290)
T PF01212_consen 127 VVSLEN-TTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGV--SLAEIAAGADSVSFGGTKNGG-APGG 202 (290)
T ss_dssp EEEEES-SBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHH--HHHHHHTTSSEEEEETTSTT--SSSE
T ss_pred EEEEEe-cCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccc--cHHHHhhhCCEEEEEEEcccc-cccc
Confidence 988888 7777666889999999999999999999999965210 000010 111111236888766333333 4666
Q ss_pred E-EEEcHHHHHh
Q psy14484 282 L-VMTTDKIYNS 292 (430)
Q Consensus 282 ~-~~~~~~~~~~ 292 (430)
+ +++++++++.
T Consensus 203 avl~~~~~~i~~ 214 (290)
T PF01212_consen 203 AVLAGNKEFIAK 214 (290)
T ss_dssp EEEEESHHHHHH
T ss_pred eEEEechHHHHH
Confidence 5 5567775443
No 355
>KOG0258|consensus
Probab=99.35 E-value=1.4e-09 Score=99.06 Aligned_cols=307 Identities=18% Similarity=0.200 Sum_probs=180.4
Q ss_pred CCCHHHHHHHHHHHhhc--CCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCcc
Q psy14484 74 LTHKPVIKLSEKLSSLT--QYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 151 (430)
Q Consensus 74 ~~~~~~~~l~~~l~~~~--~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~ 151 (430)
+..-.+..+++.+.+.- |++++.|++|.|++.|+...++++... +++.|+++-|-|.-++......++...
T Consensus 114 Gv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~-------~~~GvliPiPQYPLYsAti~l~~~~~v 186 (475)
T KOG0258|consen 114 GVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAG-------KKTGVLIPIPQYPLYSATISLLGGTQV 186 (475)
T ss_pred CChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcC-------CCCceEeecCCCchhHHHHHHhCCccc
Confidence 33456677777777664 567889999999999999999988863 678899999999877554444333111
Q ss_pred chhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCC---CCeEEEEEccccccCCCcccCChHHHHHH
Q psy14484 152 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNH---NKIAAIIIEPLVQCAGGMIMYDSIYLKLV 228 (430)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~---~~~~~vi~ep~v~~~~G~~~~~~~~l~~l 228 (430)
+ .+......+ ..|.++|++.++++. +-.++++++| .| ++| .+.+.+-+++|
T Consensus 187 ------~-----YyLdEe~~W------------~ld~~el~~~~~eA~k~i~~r~lvvINP-GN-PTG-qvls~e~ie~i 240 (475)
T KOG0258|consen 187 ------P-----YYLDEESNW------------SLDVAELERSVDEARKGINPRALVVINP-GN-PTG-QVLSEENIEGI 240 (475)
T ss_pred ------c-----eeeccccCC------------CCCHHHHHHHHHHHhccCCceEEEEECC-CC-ccc-hhhcHHHHHHH
Confidence 0 111111111 227888888888762 2356677777 54 445 66788999999
Q ss_pred HHHHHhcCCEEEEeccccCCCC-ccc-ccccc----cCC-CCCc------eeeeecccCC--CccccEEEE---EcHHHH
Q psy14484 229 REICNNYNIHLIADEIAVGCGR-TGK-FFACE----HAE-IWPD------FLCLSKGITG--GYLPLSLVM---TTDKIY 290 (430)
Q Consensus 229 ~~l~~~~gi~li~DEv~~g~g~-~g~-~~~~~----~~~-~~~d------~~~~sK~l~g--G~~~ig~~~---~~~~~~ 290 (430)
.++|.+.+++|+.||||..--+ .++ +.++. ..+ -.|| +-+.||++.| | .+-|+.- ..++..
T Consensus 241 ~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG-~RGGYmEv~n~~prv~ 319 (475)
T KOG0258|consen 241 ICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECG-QRGGYMESLNRDPRVK 319 (475)
T ss_pred HHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeec-ccCCeeecccCChhHH
Confidence 9999999999999999884333 332 33332 122 2343 2246787665 5 4556542 234444
Q ss_pred Hhhhcc-------CCccccc----ccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcCCCeeeEee
Q psy14484 291 NSIYYK-------NNINIFL----HSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQ 359 (430)
Q Consensus 291 ~~~~~~-------~~~~~~~----~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~ 359 (430)
+.+.+- ...+... ......+.+ ..+ +..-+.+.....++.++..+.+.++++ +++...+.
T Consensus 320 ~qi~Kl~si~lc~~V~GQ~~vdl~VnPP~Pgd~-----Sy~-~~~~Ekd~il~~l~~ra~l~~~~~ns~---~gi~cn~~ 390 (475)
T KOG0258|consen 320 QQIKKLASIKLCPQVSGQKLVDLVVNPPKPGDP-----SYD-LFSSEKDGILSSLRSRAKLTEDAFNSL---EGISCNPV 390 (475)
T ss_pred HHHHHHHhhhhcCCccchhhhceecCCCCCCCc-----chh-hhhhhhHhHHHHHHHHhHHHHHHHhhc---CceeeccC
Confidence 443320 0000000 000111111 000 111123456677788888888888766 56677788
Q ss_pred cceEEEEEEeecCCc-cchhH-------HHHHHHHHHHC-CcEEeecC------C--EEEEeCCCCCCHHHHHHHHHHHH
Q psy14484 360 KGMIWAFDVIIEDPE-QIETF-------SKKFFVAALKN-ELLLRPIG------N--TVYLMPPYILNKNEIQHMTSAIF 422 (430)
Q Consensus 360 ~g~~~~~~~~~~~~~-~~~~~-------a~~~~~~l~~~-Gv~~~~~~------~--~lR~~~~~~~t~e~i~~~~~~l~ 422 (430)
+|.|+.|... .-.. ..+.. -...|.+|++. ||.+.|+. + .+|.+ +..+. + +.+++++
T Consensus 391 qGAMY~fP~i-~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~T---iLp~~-~-~~i~~~~ 464 (475)
T KOG0258|consen 391 QGAMYLFPQI-SLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTT---ILPPG-L-EIIEKFK 464 (475)
T ss_pred ccceeecccc-cCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEe---ecCch-h-HHHHHHH
Confidence 9999987654 2110 00000 02345566655 99999862 2 34543 22222 5 8888888
Q ss_pred HHHHHhh
Q psy14484 423 QTFNEVI 429 (430)
Q Consensus 423 ~~l~~~~ 429 (430)
+.-.+.+
T Consensus 465 ~fH~~f~ 471 (475)
T KOG0258|consen 465 KFHAEFM 471 (475)
T ss_pred HHHHHHH
Confidence 8776654
No 356
>PLN02452 phosphoserine transaminase
Probab=99.32 E-value=4.5e-10 Score=106.86 Aligned_cols=327 Identities=9% Similarity=0.001 Sum_probs=192.0
Q ss_pred EEecccccccccCCCCCHHHHHHHHHHHhhcccc--------ccCCCCCHHHHHHHHHHHhhcCCC--CCeEEEcCCchH
Q psy14484 36 YLDAISSWWVNLFGHSNSYINKALKNQLNKLEHV--------MLSNLTHKPVIKLSEKLSSLTQYK--LGHCFYGSDGAS 105 (430)
Q Consensus 36 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~--------~~~~~~~~~~~~l~~~l~~~~~~~--~~~v~~~~sgte 105 (430)
.+.|..|-.. -+++|++++++.+.++... ++.........+..+.|.++++.+ .+-+++..|||.
T Consensus 8 ~~~f~pGP~~-----lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~ 82 (365)
T PLN02452 8 VFNFSAGPAT-----LPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGAST 82 (365)
T ss_pred eEeeeCCCCC-----CCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHH
Confidence 4566665221 3789999988876443211 111112256677888888888632 223455579999
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeC-CCCCCC-CCCCCChhHH
Q psy14484 106 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIIT-TPDSRN-INKGNSANEI 183 (430)
Q Consensus 106 A~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~ 183 (430)
++++++..+.. +++++++...++.|....-.+.. + ........ .+..+. .+
T Consensus 83 ~~ea~~~nl~~--------~~~~~l~~~~G~fg~r~~~~a~~--------~---g~~~~~~~~~~~~~~~~~-------- 135 (365)
T PLN02452 83 QFAAIPLNLCK--------PGDKADFVVTGSWSKKAAKEAKK--------Y---CKTNVIASGKDEKYTKIP-------- 135 (365)
T ss_pred HHHHHHHhcCC--------CCCeEEEEECCHHHHHHHHHHHH--------h---CCCcEEEecCCCCCCCCC--------
Confidence 99999887764 44566666666655432211100 0 01111110 111000 11
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCC
Q psy14484 184 ARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIW 263 (430)
Q Consensus 184 ~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~ 263 (430)
+++++ +. +.++..|.+.+ ....+|+...+ ++++. ++++++|.+++ ++- ....++.+++
T Consensus 136 ---~~~~~----~~-~~~~~~v~~~h-nETstGv~~~~---~~~i~------~~~lvVDa~Ss-~g~--~pidv~~~~v- 193 (365)
T PLN02452 136 ---SVSEW----EL-TPDAKFVHICA-NETIHGVEFKD---YPDVG------NVPLVADMSSN-FLS--KPVDVSKYGV- 193 (365)
T ss_pred ---ChHHc----CC-CCCCcEEEECC-CCCCCcEecCc---ccccC------CCeEEEECCcc-ccC--cccCHHHcCE-
Confidence 34443 22 24567777766 66667864222 44443 38999999987 432 2344444554
Q ss_pred CceeeeecccCCCccccEEEEEcHHHHHhhhccCCccc------ccccCCC-CCCHHHHHHHHHHHHHHhhc----CHHH
Q psy14484 264 PDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINI------FLHSHSY-SGNPLACCAALATLEIFNKD----NILQ 332 (430)
Q Consensus 264 ~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~------~~~~~t~-~~~~~~~~aa~~~l~~~~~~----~~~~ 332 (430)
|+.+.-|.+|. ..+|.+++++++.+.+... .+.. ....+++ +++..++.+..++|+.++++ ...+
T Consensus 194 -~~~saqK~lGP--~Gl~~v~vr~~~l~~~~~~-~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~ 269 (365)
T PLN02452 194 -IYAGAQKNVGP--SGVTIVIIRKDLIGNARPI-TPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEK 269 (365)
T ss_pred -EEEecccccCC--CCeEEEEEcHHHHhhcccC-CCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHH
Confidence 66666698853 3489999999988665431 0000 0112333 44556777777889877653 3556
Q ss_pred HHHHHHHHHHHHHHchhcC-CC-eeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC---CEEEEeCCC
Q psy14484 333 RISQDMKKITKALTSLITH-PK-IINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG---NTVYLMPPY 407 (430)
Q Consensus 333 ~~~~~~~~l~~~l~~l~~~-~~-~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~---~~lR~~~~~ 407 (430)
+.+++.+++++.|++...+ .. ..........+.|.+. +. ....+|.+.+.++|++..++. +.+|++.=-
T Consensus 270 r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~-~~-----~~~~~f~~~~~~~g~~~~~G~r~~gg~R~s~yn 343 (365)
T PLN02452 270 RNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLG-GS-----ELEAEFVKEAAKAGMVQLKGHRSVGGMRASIYN 343 (365)
T ss_pred HHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEEEEcC-Cc-----hhHHHHHHHHHHCCCcccCCccccCceEEECcC
Confidence 7788888888888765322 11 1101112344555555 31 124789999999999998763 348999888
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q psy14484 408 ILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 408 ~~t~e~i~~~~~~l~~~l~ 426 (430)
.++.++++.+++.+++.-.
T Consensus 344 a~~~~~v~~L~~~m~~f~~ 362 (365)
T PLN02452 344 AMPLAGVEKLVAFMKDFQA 362 (365)
T ss_pred CCCHHHHHHHHHHHHHHHH
Confidence 8999999999999987654
No 357
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.30 E-value=1.8e-09 Score=113.29 Aligned_cols=315 Identities=12% Similarity=0.061 Sum_probs=179.6
Q ss_pred ccCCC-CCHHHHHHHHHHHhhccccccCCC------CCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhh
Q psy14484 46 NLFGH-SNSYINKALKNQLNKLEHVMLSNL------THKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYW 118 (430)
Q Consensus 46 ~~lG~-~~p~v~~a~~~~~~~~~~~~~~~~------~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~ 118 (430)
...+| -++.|.+++.+....+..+.+ +. ..+...+++..++++++.+++++.++.++|.+.++++...+.
T Consensus 111 G~y~~~~P~~v~~~i~~~~~~~TaytP-YqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~-- 187 (993)
T PLN02414 111 GYYNTHVPPVILRNILENPGWYTQYTP-YQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNI-- 187 (993)
T ss_pred CCCCccCCHHHHHHHHhChHHHhhcCC-CchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhc--
Confidence 34444 456666888876554433221 11 124456788899999998899999999999999977665432
Q ss_pred hhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhC
Q psy14484 119 YNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKN 198 (430)
Q Consensus 119 ~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~ 198 (430)
.+| ++++|++.+..|... ...+... ......++..++.+ +.+ ..
T Consensus 188 -~~g--~~~~VlVs~~~hP~~-~~v~~t~--------a~~~GieV~~v~~~-----------------~~~----~~--- 231 (993)
T PLN02414 188 -LKG--KKKKFLIASNCHPQT-IDVCQTR--------ADGLGLEVVVADEK-----------------DFD----YS--- 231 (993)
T ss_pred -ccC--CCCEEEEcCccCHhH-HHHHHHh--------hhhcCCEEEEecch-----------------hhc----cc---
Confidence 111 346677766555443 2222100 11122333444332 111 11
Q ss_pred CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeee--cc---c
Q psy14484 199 HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KG---I 273 (430)
Q Consensus 199 ~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s--K~---l 273 (430)
.+.++++++ . +.+..|.+.+ +++|.++|+++|+++++ .++. ++-.+ . -..-.+..|+++.+ |. +
T Consensus 232 ~~~v~~vlv-q-~P~~~G~v~d----v~~I~~~ah~~GaL~iV-aad~-lal~~--l-~~pge~GADi~vgsgqKwg~P~ 300 (993)
T PLN02414 232 SGDVCGVLV-Q-YPATDGEVLD----YAEFVKNAHANGVKVVM-ATDL-LALTM--L-KPPGEWGADIVVGSAQRFGVPM 300 (993)
T ss_pred cCceEEEEE-e-cCCCCeEEcC----HHHHHHHHHHcCCEEEE-EECH-HHhcC--C-CCHhhccCcEEEECCCccccCC
Confidence 234655554 2 4466787877 99999999999999999 4333 21111 0 01123456888654 32 3
Q ss_pred CCCccccEEEEEcHHHHHhhhcc--CC------cccc------------cccCCCCC-CHHHHHHHHHHHH--HHhh---
Q psy14484 274 TGGYLPLSLVMTTDKIYNSIYYK--NN------INIF------------LHSHSYSG-NPLACCAALATLE--IFNK--- 327 (430)
Q Consensus 274 ~gG~~~ig~~~~~~~~~~~~~~~--~~------~~~~------------~~~~t~~~-~~~~~~aa~~~l~--~~~~--- 327 (430)
++|+-..|++++++++...+... +. .+.+ ....|.+. ...++.+++++.. .+..
T Consensus 301 G~GGP~aGflavr~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl 380 (993)
T PLN02414 301 GYGGPHAAFLATSQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGL 380 (993)
T ss_pred CCCCCCeeEEEECHHHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccH
Confidence 32223589999999876533210 00 0010 01122221 1123334443331 2222
Q ss_pred cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-CCEEEEeCC
Q psy14484 328 DNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-GNTVYLMPP 406 (430)
Q Consensus 328 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-~~~lR~~~~ 406 (430)
.+..+++.+++.++.++|+.+ ....... ...-.+.+... + ..++.++|.++||.++.. ++.+|++++
T Consensus 381 ~~Ia~ri~~la~~l~~~L~~~-G~~~~~~--~~f~~vt~~~~-~--------~~~v~~~L~~~gI~l~~~~~~~lrvs~~ 448 (993)
T PLN02414 381 KTIAQRVHGLAGVFAAGLKKL-GFQVQSL--PFFDTVKVKCS-D--------ADAIADAAAKVGINLRVVDANTVTVSFD 448 (993)
T ss_pred HHHHHHHHHHHHHHHHHHhhc-CCccCCC--CCcCeEEEecC-C--------HHHHHHHHHHCCCeeEEecCCeEEEEee
Confidence 344577888888999888764 2222211 11112222222 1 257999999999988765 478999999
Q ss_pred CCCCHHHHHHHHHHHH
Q psy14484 407 YILNKNEIQHMTSAIF 422 (430)
Q Consensus 407 ~~~t~e~i~~~~~~l~ 422 (430)
..+|++||+.++++|.
T Consensus 449 e~~T~edId~L~~~l~ 464 (993)
T PLN02414 449 ETTTLEDVDKLFKVFA 464 (993)
T ss_pred ccCCHHHHHHHHHHHc
Confidence 9999999999999996
No 358
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.28 E-value=2.6e-09 Score=112.57 Aligned_cols=285 Identities=11% Similarity=0.058 Sum_probs=167.5
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhh
Q psy14484 77 KPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIY 156 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~ 156 (430)
+...+++..++++++.+..++.+..++|.+.++++.+.+ +. ++ ++++|++.+..|... ...+. ...
T Consensus 121 eal~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~-~~--~~--~~~~vlv~~~~hP~~-~~v~~--------t~a 186 (954)
T PRK05367 121 EALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKR-VS--KS--KSNRFFVDDDVHPQT-LDVLR--------TRA 186 (954)
T ss_pred HHHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhh-hc--cC--CCCEEEEcCccCHHH-HHHHH--------HHH
Confidence 555678889999998888899999999999997665443 32 11 136777766555433 22111 011
Q ss_pred hccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcC
Q psy14484 157 TSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYN 236 (430)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g 236 (430)
.....+++.++.+. |++ +++++++++. +.+..|.+.+ +++|.++|+++|
T Consensus 187 ~~~G~ev~~~~~~~----------------d~~---------~~~~~~vlvq--~p~~~G~i~d----~~~i~~~ah~~G 235 (954)
T PRK05367 187 EPLGIEVVVGDAAK----------------ALD---------HDDVFGVLLQ--YPGTSGEVRD----YTALIAAAHARG 235 (954)
T ss_pred HhCCCEEEEecCcc----------------CCC---------cccEEEEEEe--cCCCCeeecc----HHHHHHHHHHcC
Confidence 12233444554331 111 2356665443 4467787777 999999999999
Q ss_pred CEEEEeccccCCCCcccccccccCCCCCceeeee--cc---cCCCccccEEEEEcHHHHHhhhcc--C------Ccccc-
Q psy14484 237 IHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KG---ITGGYLPLSLVMTTDKIYNSIYYK--N------NINIF- 302 (430)
Q Consensus 237 i~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s--K~---l~gG~~~ig~~~~~~~~~~~~~~~--~------~~~~~- 302 (430)
+++++|..+...+.. . ..-.+..|+++.+ |. ++.|+--.|++++++++.+.+... + ..+.+
T Consensus 236 al~~vda~~~Al~~l-~----~pge~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~ 310 (954)
T PRK05367 236 ALVAVAADLLALTLL-T----PPGEMGADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALR 310 (954)
T ss_pred CEEEEEehhhhccCC-C----ChhhcCCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCcccc
Confidence 999999855322111 0 1113346887654 42 333323488899999877665421 1 00000
Q ss_pred -----------cccCCCCCC-HHHHHHHHHHH--HHHhh---cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEE
Q psy14484 303 -----------LHSHSYSGN-PLACCAALATL--EIFNK---DNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWA 365 (430)
Q Consensus 303 -----------~~~~t~~~~-~~~~~aa~~~l--~~~~~---~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~ 365 (430)
....|.+.. ..++.++.+.+ ..+.. .++.+++..+..++.++|+.. ....... .....+.
T Consensus 311 lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~-G~~~~~~--~~f~~~~ 387 (954)
T PRK05367 311 LALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRAL-GLEVVHD--SFFDTLT 387 (954)
T ss_pred cccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhc-CcccCCC--CCCCeEE
Confidence 111222222 22233333332 33333 344567788888888888653 2222111 1011122
Q ss_pred EEEeecCCccchhHHHHHHHHHHHCCcEEeec-CCEEEEeCCCCCCHHHHHHHHHHHH
Q psy14484 366 FDVIIEDPEQIETFSKKFFVAALKNELLLRPI-GNTVYLMPPYILNKNEIQHMTSAIF 422 (430)
Q Consensus 366 ~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-~~~lR~~~~~~~t~e~i~~~~~~l~ 422 (430)
+... . . +.++.++|.++||.+... ++.+|++++.++|++||+.+++.|.
T Consensus 388 ~~~~-~----~---~~~i~~~l~~~gi~~~~~~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 388 VEVG-G----D---AAAVLARALAAGINLRRVDDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred EeCC-C----C---HHHHHHHHHHCCceeccccCCEEEEEecccCCHHHHHHHHHHHc
Confidence 2221 1 1 468999999999998665 5789999999999999999999996
No 359
>PLN02271 serine hydroxymethyltransferase
Probab=99.28 E-value=1.6e-09 Score=105.55 Aligned_cols=295 Identities=10% Similarity=0.023 Sum_probs=163.3
Q ss_pred HHHHhhcCCCC----CeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhcc-CCCccchhhhhc
Q psy14484 84 EKLSSLTQYKL----GHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAV-TNIQSFKEIYTS 158 (430)
Q Consensus 84 ~~l~~~~~~~~----~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~-~~~~~~~~~~~~ 158 (430)
+...++++.+. .+|.. -||+.||.+++.++.. ++++|+..+..+-|+..-.... .+... .+.
T Consensus 201 era~~lF~~~~~~~gaNVQp-~SGs~AN~aV~~ALl~--------PGD~IL~ldl~~GGHlshg~~~~~g~~v---s~s- 267 (586)
T PLN02271 201 ERALAAFGLDSEKWGVNVQP-YSCTSANFAVYTGLLL--------PGDRIMGLDSPSGGHMSHGYYTPGGKKV---SGA- 267 (586)
T ss_pred HHHHHHhCCcccccccceee-ccHHHHHHHHHHHhcC--------CCCEEEEecCCCCCchhccccccccccc---ccc-
Confidence 44556775444 23333 3999999999988764 7899999988776664322111 00000 000
Q ss_pred cCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCE
Q psy14484 159 LLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIH 238 (430)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~ 238 (430)
...+..++++.+... ...|.+++++.... .++++|++.. .... ...+ +++++++|+++|++
T Consensus 268 -G~~~~~vpY~~d~~~---------g~IDyd~lek~a~~--~rPKLII~g~-Sayp--r~~D----~~~i~eIAdevGA~ 328 (586)
T PLN02271 268 -SIFFESLPYKVNPQT---------GYIDYDKLEEKALD--FRPKILICGG-SSYP--REWD----YARFRQIADKCGAV 328 (586)
T ss_pred -cceEEEEEccccccc---------CccCHHHHHHHhhh--cCCeEEEECc-hhcc--CcCC----HHHHHHHHHHcCCE
Confidence 111233443321100 01288999985543 5788999877 4333 2344 89999999999999
Q ss_pred EEEeccccCCCCcccccccccCCCCCceeeee--cccCCCccccEEEEEcHHH--------------------HHhhhcc
Q psy14484 239 LIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITGGYLPLSLVMTTDKI--------------------YNSIYYK 296 (430)
Q Consensus 239 li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s--K~l~gG~~~ig~~~~~~~~--------------------~~~~~~~ 296 (430)
|++|.+|. .|-.... .+...-...|+++++ |+|.|. +-|.++.++++ .+.+...
T Consensus 329 LmvD~AH~-aGLIa~g-~~~sP~~~aDvvt~TTHKtLrGP--rGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~a 404 (586)
T PLN02271 329 LMCDMAHI-SGLVAAK-ECVNPFDYCDIVTSTTHKSLRGP--RGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFA 404 (586)
T ss_pred EEEECccc-ccccccC-cCCCCCcCCcEEEeCCcccCCCC--CceEEEecccccccccCCccccccccccHHHHHHhhcc
Confidence 99999998 3332211 011111147888765 888773 34777777642 2222220
Q ss_pred CCcccccccCCCCCCHHHHHHHHHHHHHHhhcC---HHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCC
Q psy14484 297 NNINIFLHSHSYSGNPLACCAALATLEIFNKDN---ILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDP 373 (430)
Q Consensus 297 ~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~---~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~ 373 (430)
-.+..++++.. ..+++...++.....++ +.+++.++++.|.+.|.+. +++.+..-. ...++.+++. .-.
T Consensus 405 --VfPglqgGphn---~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~-G~~vv~ggT-dnHlvLvDl~-~~g 476 (586)
T PLN02271 405 --VFPSLQGGPHN---NHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRR-KCRLVTGGT-DNHLLLWDLT-TLG 476 (586)
T ss_pred --cCCccccChhH---HHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC-CCeEeeCCC-CcceeeecCc-ccC
Confidence 01112222221 12333334455444444 5566777888888888654 333333211 2344555654 311
Q ss_pred ccchhHHHHHHHHHHHCCcEEee----c------CCEEEEeCCCC----CCHHHHHHHHHHHHHHHH
Q psy14484 374 EQIETFSKKFFVAALKNELLLRP----I------GNTVYLMPPYI----LNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 374 ~~~~~~a~~~~~~l~~~Gv~~~~----~------~~~lR~~~~~~----~t~e~i~~~~~~l~~~l~ 426 (430)
. . .....+.|.+-||.+.. + +..||+..+.. ..++|+.++.+.|.+++.
T Consensus 477 ~--~--G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 477 L--T--GKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred C--C--HHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 1 1 24555666677887753 1 24678765433 366888888887777765
No 360
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.24 E-value=2.9e-09 Score=97.42 Aligned_cols=276 Identities=15% Similarity=0.101 Sum_probs=164.3
Q ss_pred EEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCC
Q psy14484 97 CFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINK 176 (430)
Q Consensus 97 v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (430)
.+-|.|||-|+..+.+.+.... ++..|-+.+|++..|.......+- ++ ..+|.......
T Consensus 97 t~Qt~GGTGAL~~~A~fl~~~~------~~~~vwis~PtW~NH~~If~~aGl-------------~v--~~Y~Yyd~~~~ 155 (396)
T COG1448 97 TVQTLGGTGALRVAADFLARFF------PDATVWISDPTWPNHKAIFEAAGL-------------EV--ETYPYYDAETK 155 (396)
T ss_pred heecCCcchHHHHHHHHHHHhC------CCceEEeCCCCcHhHHHHHHhcCC-------------ce--eeeeccccccc
Confidence 4668899999999998777764 677788889999776443333221 11 12222111000
Q ss_pred CCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccc
Q psy14484 177 GNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA 256 (430)
Q Consensus 177 ~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~ 256 (430)
..|++.+-..|++.+.+..+++..+ -+|++| ..|+.+..++|.++.++.+.+-++|=+|.||+. | ..
T Consensus 156 --------~~df~~mla~L~~a~~~~vvLLH~C-cHNPTG-~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~-G--le 222 (396)
T COG1448 156 --------GLDFDGMLADLKTAPEGSVVLLHGC-CHNPTG-IDPTEEQWQELADLIKERGLIPFFDIAYQGFAD-G--LE 222 (396)
T ss_pred --------cccHHHHHHHHHhCCCCCEEEEecC-CCCCCC-CCCCHHHHHHHHHHHHHcCCeeeeehhhhhhcc-c--hH
Confidence 0277787778887766667777778 889999 888999999999999999999999999999953 3 11
Q ss_pred cccC------CCCCcee---eeecccCC-CccccEEEEE---cHHHHHhhhccCCcccccccCCCCCCH-HHHHHHHHHH
Q psy14484 257 CEHA------EIWPDFL---CLSKGITG-GYLPLSLVMT---TDKIYNSIYYKNNINIFLHSHSYSGNP-LACCAALATL 322 (430)
Q Consensus 257 ~~~~------~~~~d~~---~~sK~l~g-G~~~ig~~~~---~~~~~~~~~~~~~~~~~~~~~t~~~~~-~~~~aa~~~l 322 (430)
-+.+ ...+.++ +|||.++- | -|+|++.. +++..+.+.. .-....-++|+.+| .++..+...|
T Consensus 223 eDa~~lR~~a~~~~~~lva~S~SKnfgLYg-ERVGa~~vva~~~~~a~~v~s---qlk~~iR~~ySnPP~~Ga~vva~IL 298 (396)
T COG1448 223 EDAYALRLFAEVGPELLVASSFSKNFGLYG-ERVGALSVVAEDAEEADRVLS---QLKAIIRTNYSNPPAHGAAVVATIL 298 (396)
T ss_pred HHHHHHHHHHHhCCcEEEEehhhhhhhhhh-hccceeEEEeCCHHHHHHHHH---HHHHHHHhccCCCchhhHHHHHHHh
Confidence 1111 1123333 58898875 5 68886433 3344433322 00111223444333 2333333334
Q ss_pred H--HHh------hcCHHHHHHHHHHHHHHHHHchhcCCCeeeE-eecceEEEEEEeecCCccchhHHHHHHHHHHHCCcE
Q psy14484 323 E--IFN------KDNILQRISQDMKKITKALTSLITHPKIINF-RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELL 393 (430)
Q Consensus 323 ~--~~~------~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~ 393 (430)
+ .+. -+..++++.++++.|.+.|+....-..+..+ ...|+|...-+. .+++.+--.+.||+
T Consensus 299 ~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~Gls----------~~QV~rLree~~IY 368 (396)
T COG1448 299 NNPELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFIISQRGMFSYTGLS----------PEQVDRLREEFGIY 368 (396)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchHhhcCceeecCCCC----------HHHHHHHHHhccEE
Confidence 2 111 1234566777777777777664111112222 334443322121 13444444466999
Q ss_pred EeecCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q psy14484 394 LRPIGNTVYLMPPYILNKNEIQHMTSAIFQT 424 (430)
Q Consensus 394 ~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~ 424 (430)
....| |++++ ..++..|+.+.++|.++
T Consensus 369 ~v~sG---Ri~va-Gl~~~ni~~va~ai~~v 395 (396)
T COG1448 369 LVASG---RINVA-GLNTSNIDYVAKAIAAV 395 (396)
T ss_pred EecCC---eeeec-cCChhhHHHHHHHHHhh
Confidence 87666 78766 67888999999988765
No 361
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.23 E-value=7.1e-10 Score=105.59 Aligned_cols=234 Identities=15% Similarity=0.125 Sum_probs=131.6
Q ss_pred CCHHHHHHHHHHHhhcCCCCCe-EEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccch
Q psy14484 75 THKPVIKLSEKLSSLTQYKLGH-CFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFK 153 (430)
Q Consensus 75 ~~~~~~~l~~~l~~~~~~~~~~-v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~ 153 (430)
+.....+.++..++.+ +.++ .+++||.|.+|.+++.+++. ++++| .++...|-+...++.+++...
T Consensus 64 p~G~I~eAe~~aA~~f--GAd~t~flvnGsT~g~~a~i~a~~~--------~gd~V-Lv~RN~HkSv~~alil~ga~P-- 130 (417)
T PF01276_consen 64 PEGIIKEAEELAARAF--GADKTFFLVNGSTSGNQAMIMALCR--------PGDKV-LVDRNCHKSVYNALILSGAIP-- 130 (417)
T ss_dssp TBTHHHHHHHHHHHHH--TESEEEEESSHHHHHHHHHHHHHTT--------TTCEE-EEETT--HHHHHHHHHHTEEE--
T ss_pred CccHHHHHHHHHHHhc--CCCeEEEEecCchHHHHHHHHHhcC--------CCCEE-EEcCCcHHHHHHHHHHcCCeE--
Confidence 4456678888888899 4454 55567888888888887775 45554 457888888766666555221
Q ss_pred hhhhccCCCeeEeCC-CCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeE---EEEEccccccCCCcccCChHHHHHHH
Q psy14484 154 EIYTSLLNKTYIITT-PDSRNINKGNSANEIARCAIFDLEILLKKNHNKIA---AIIIEPLVQCAGGMIMYDSIYLKLVR 229 (430)
Q Consensus 154 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~---~vi~ep~v~~~~G~~~~~~~~l~~l~ 229 (430)
++++. .+.+....+.+.+++ +.+.++++++++++..+ ++++.| +=.|.... +++|.
T Consensus 131 ----------vyi~p~~~~~gi~~~i~~~~~---~~~~i~~~l~~~p~~k~~~~vvlt~P---TY~Gv~~d----i~~I~ 190 (417)
T PF01276_consen 131 ----------VYIPPEDNEYGIIGGISPDEF---NEEDIEEALKEHPDAKAPRLVVLTSP---TYYGVCYD----IKEIA 190 (417)
T ss_dssp ----------EEEEEEE-TTS-BEEB-GGGG---SHHHHHHHHHHCTTCHCESEEEEESS----TTSEEE-----HHHHH
T ss_pred ----------EEecCCccccCCccCCChhhh---hHHHHHHHHHhCccccCceEEEEeCC---CCCeEEEC----HHHHH
Confidence 11111 111111111111121 34889999999876544 677766 33475655 99999
Q ss_pred HHHHhcCCEEEEeccccCCCCcccccccccCCCCCc-------eeeee--cccCCCccccEEEEEcHHH-H--HhhhccC
Q psy14484 230 EICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD-------FLCLS--KGITGGYLPLSLVMTTDKI-Y--NSIYYKN 297 (430)
Q Consensus 230 ~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d-------~~~~s--K~l~gG~~~ig~~~~~~~~-~--~~~~~~~ 297 (430)
++|++++++|+|||++.+...-. .+.........| +++-| |.+++= ..-+++-.+.+. + +.+..
T Consensus 191 ~~~h~~~~~llvDEAhGah~~F~-~lp~~a~~~gad~~~~~~~~vvqS~HKtL~al-tQts~lh~~~~~~v~~~~~~~-- 266 (417)
T PF01276_consen 191 EICHKHGIPLLVDEAHGAHFGFH-PLPRSALALGADRPNDPGIIVVQSTHKTLPAL-TQTSMLHVKGDRIVDHERVNE-- 266 (417)
T ss_dssp HHHCCTECEEEEE-TT-TTGGCS-GGGTTCSSTTSS-CTSBEEEEEEEHHHHSSS--TT-EEEEEETCCCTTHHHHHH--
T ss_pred HHhcccCCEEEEEccccccccCC-CCccchhhccCccccccceeeeechhhccccc-ccceEEEecCCCcccHHHHHH--
Confidence 99999999999999987431111 222233445566 77777 776652 234566655442 1 22221
Q ss_pred CcccccccCCCCCCHHHHHHHHHHHHHH---hhcCHHHHHHHHHHHHHHHHHch
Q psy14484 298 NINIFLHSHSYSGNPLACCAALATLEIF---NKDNILQRISQDMKKITKALTSL 348 (430)
Q Consensus 298 ~~~~~~~~~t~~~~~~~~~aa~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~l 348 (430)
.+..-.|.+++.+-++..-.+.+++ +...+.++..+..+.+++.++++
T Consensus 267 ---~l~~~~TTSPSY~lmASlD~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~ 317 (417)
T PF01276_consen 267 ---ALSMHQTTSPSYPLMASLDVARAQMEEEEGRELLEEAIELAEEFRKKINRL 317 (417)
T ss_dssp ---HHHHHS-SS--HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHcCCChHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 1112233344544444333344444 23567788888899999999544
No 362
>PRK15029 arginine decarboxylase; Provisional
Probab=99.22 E-value=3.7e-09 Score=108.01 Aligned_cols=305 Identities=9% Similarity=0.038 Sum_probs=166.4
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhh
Q psy14484 77 KPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIY 156 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~ 156 (430)
....+.++..++.++++ ...+++||.|.+|.+++..++. ++++|+ ++...|-+..-++.+++...
T Consensus 205 G~I~eAq~~aA~~fgA~-~t~FlvNGST~gn~a~i~a~~~--------~gd~Vl-v~RN~HKSv~~al~L~ga~P----- 269 (755)
T PRK15029 205 GAFGESEKYAARVFGAD-RSWSVVVGTSGSNRTIMQACMT--------DNDVVV-VDRNCHKSIEQGLILTGAKP----- 269 (755)
T ss_pred cHHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHHhcC--------CCCEEE-eecccHHHHHHHHHHcCCeE-----
Confidence 34456667777788522 3566677888888877777764 445544 67888988776666665321
Q ss_pred hccCCCeeEeCCC-CCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCe--------EEEEEccccccCCCcccCChHHHHH
Q psy14484 157 TSLLNKTYIITTP-DSRNINKGNSANEIARCAIFDLEILLKKNHNKI--------AAIIIEPLVQCAGGMIMYDSIYLKL 227 (430)
Q Consensus 157 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~--------~~vi~ep~v~~~~G~~~~~~~~l~~ 227 (430)
+++... ..+....+.+...+ +.+.+++++++++... +++++.| +=.|.... +++
T Consensus 270 -------vyl~P~~~~~Gi~~~i~~~~~---~~e~i~~~l~~~p~~k~~~~~~~~avvlt~P---TY~Gv~~d----i~~ 332 (755)
T PRK15029 270 -------VYMVPSRNRYGIIGPIYPQEM---QPETLQKKISESPLTKDKAGQKPSYCVVTNC---TYDGVCYN----AKE 332 (755)
T ss_pred -------EEecccccccCCccCCCcccc---CHHHHHHHHHhCchhhhccccCceEEEEECC---CCcceeeC----HHH
Confidence 111100 11111111111111 3678888998875433 4666666 22354444 999
Q ss_pred HHHHHHhcCCEEEEeccccCCCCccccccc-ccC-----C-CCCc-eeeee--cccCCCccccEEEEEcH--------HH
Q psy14484 228 VREICNNYNIHLIADEIAVGCGRTGKFFAC-EHA-----E-IWPD-FLCLS--KGITGGYLPLSLVMTTD--------KI 289 (430)
Q Consensus 228 l~~l~~~~gi~li~DEv~~g~g~~g~~~~~-~~~-----~-~~~d-~~~~s--K~l~gG~~~ig~~~~~~--------~~ 289 (430)
|.++|++++++|++||++.+...-.+.+.- ... . ..+| +++-| |.+++= ..-+++-.+. .+
T Consensus 333 I~~~~h~~~~~llvDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~al-TQaS~LHv~~~~~~id~~r~ 411 (755)
T PRK15029 333 AQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNAL-SQASYIHVREGRGAINFSRF 411 (755)
T ss_pred HHHHHHhcCCeEEEECccccccccCccccccccccccccccCCCceEEEEchhhcccch-hhhhhheeCCCccccCHHHH
Confidence 999999999999999998743221222221 111 1 3477 66666 766541 1123333322 22
Q ss_pred HHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh---hcCHHHHHHHHHHHHHHHHHchhc-C------------CC
Q psy14484 290 YNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN---KDNILQRISQDMKKITKALTSLIT-H------------PK 353 (430)
Q Consensus 290 ~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~---~~~~~~~~~~~~~~l~~~l~~l~~-~------------~~ 353 (430)
.+.+.. +. |.+++-+-++..-.+-.+++ ...+.++..+....+++.+.++.. + |.
T Consensus 412 ~~~l~~--------~q-STSPSY~LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~ 482 (755)
T PRK15029 412 NQAYMM--------HA-TTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKE 482 (755)
T ss_pred HHHHHH--------Hc-CCCcHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhccccccccccccccccCcc
Confidence 222222 32 33444333332223333343 234667777788888888876522 0 00
Q ss_pred --------------------------eeeEe------e-----------cceEEEEEEeecCCccchh------HHHHHH
Q psy14484 354 --------------------------IINFR------Q-----------KGMIWAFDVIIEDPEQIET------FSKKFF 384 (430)
Q Consensus 354 --------------------------~~~~~------~-----------~g~~~~~~~~~~~~~~~~~------~a~~~~ 384 (430)
..... + .-+=+.+... .-.. +.. -+..+.
T Consensus 483 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~lDp~Klti~~~-~~g~-sG~~~~~gip~~~l~ 560 (755)
T PRK15029 483 VVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDLPDNWSMLDPIKVSILAP-GMGE-DGELEETGVPAALVT 560 (755)
T ss_pred ccccccccccccccccchhhhccccceeeecccccccCcccccccccccCCceEEEEcC-CCCC-CCcccccCCcHHHHH
Confidence 00000 0 0000111111 0000 000 034788
Q ss_pred HHHHHCCcEEeecC-CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 385 VAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 385 ~~l~~~Gv~~~~~~-~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
+.|.++||.+.-.+ ..+-+.++...|++++++++++|.+.-
T Consensus 561 ~~L~~~gI~~E~~~~~~vL~l~s~g~t~~~~~~L~~aL~~~~ 602 (755)
T PRK15029 561 AWLGRHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCSFK 602 (755)
T ss_pred HHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 88988899988765 567777788999999999999998663
No 363
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.20 E-value=1.7e-08 Score=96.60 Aligned_cols=240 Identities=19% Similarity=0.153 Sum_probs=137.9
Q ss_pred HHHHHHHHHHHhhcCCC-------CCeEEEcCCchHHHHHHHHHHHHhhh----hcCCC-CCcEEEEEcCCCCCcchhhh
Q psy14484 77 KPVIKLSEKLSSLTQYK-------LGHCFYGSDGASAVEVALKMSFHYWY----NKGFL-NKKKFICLQNSYHGETLGAL 144 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~~~-------~~~v~~~~sgteA~~~al~~~~~~~~----~~g~~-~~~~vl~~~~~yhg~~~~~~ 144 (430)
....++.++++++++.+ ...-++|+|||+||..|+.++|.... .+|.. ..+.++..+..-|-+..-+.
T Consensus 79 ~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa 158 (373)
T PF00282_consen 79 EIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAA 158 (373)
T ss_dssp HHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHH
T ss_pred cchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhc
Confidence 55567778888888643 13578999999999999999987543 22221 12345555555564322222
Q ss_pred ccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhC--CCC-eEEEEEccccccCCCcccCC
Q psy14484 145 AVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKN--HNK-IAAIIIEPLVQCAGGMIMYD 221 (430)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~-~~~vi~ep~v~~~~G~~~~~ 221 (430)
..+..+.+.++...+.+. |+++|++++.+. .+. +.+|+..- ....+|.+-|
T Consensus 159 ------------~~lGlg~~~I~~~~~~~m------------d~~~L~~~l~~~~~~g~~p~~vvat~-Gtt~~Ga~D~- 212 (373)
T PF00282_consen 159 ------------RILGLGVRKIPTDEDGRM------------DIEALEKALEKDIANGKTPFAVVATA-GTTNTGAIDP- 212 (373)
T ss_dssp ------------HHTTSEEEEE-BBTTSSB-------------HHHHHHHHHHHHHTTEEEEEEEEEB-S-TTTSBB-S-
T ss_pred ------------ceeeeEEEEecCCcchhh------------hHHHhhhhhcccccccccceeeeccC-CCcccccccC-
Confidence 223334566766655554 889999988765 223 44666666 7777888888
Q ss_pred hHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCC-CCceeeee--cccCCCccccEEEEEcHH-HH-Hhhhcc
Q psy14484 222 SIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI-WPDFLCLS--KGITGGYLPLSLVMTTDK-IY-NSIYYK 296 (430)
Q Consensus 222 ~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~-~~d~~~~s--K~l~gG~~~ig~~~~~~~-~~-~~~~~~ 296 (430)
+++|.++|+++++++|||.++.|....-+..-.-..++ ..|=++++ |.++.. ++.|+++.+.+ .. ..+...
T Consensus 213 ---l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P-~~~~~~l~r~~~~l~~~~~~~ 288 (373)
T PF00282_consen 213 ---LEEIADICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVP-YGCGVLLVRDKSDLRDAFSIN 288 (373)
T ss_dssp ---HHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-S-SS-EEEEESSGGGHHGGGEEE
T ss_pred ---HHHHhhhccccceeeeecccccccccccccccccccccccccccccchhhhhcCC-ccceeEEeecccchHHHhccC
Confidence 99999999999999999999887321111110111222 13545444 777666 58899988764 22 222110
Q ss_pred CCcccc------------cccCCCCCC-HHHHHHHHHHHHHHhhcCHHHHH---HHHHHHHHHHHHch
Q psy14484 297 NNINIF------------LHSHSYSGN-PLACCAALATLEIFNKDNILQRI---SQDMKKITKALTSL 348 (430)
Q Consensus 297 ~~~~~~------------~~~~t~~~~-~~~~~aa~~~l~~~~~~~~~~~~---~~~~~~l~~~l~~l 348 (430)
...+ ....|..++ .......+.+|+.+..+.+.+++ .+++++|.+.|++.
T Consensus 289 --~~Yl~~~~~~~~~~~~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~ 354 (373)
T PF00282_consen 289 --ADYLGNDDRESDESYDYGDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKD 354 (373)
T ss_dssp --ETCTT-S-SSS-GGGCEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred --hhhhcccccccccccccccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 0000 011222322 34445666777766666665554 55777777777765
No 364
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.17 E-value=2.2e-08 Score=94.37 Aligned_cols=312 Identities=8% Similarity=0.002 Sum_probs=180.2
Q ss_pred CHHHHHHHHHHHhhcccc--------ccCCCCCHHHHHHHHHHHhhcCCCC-CeEEEcC-CchHHHHHHHHHHHHhhhhc
Q psy14484 52 NSYINKALKNQLNKLEHV--------MLSNLTHKPVIKLSEKLSSLTQYKL-GHCFYGS-DGASAVEVALKMSFHYWYNK 121 (430)
Q Consensus 52 ~p~v~~a~~~~~~~~~~~--------~~~~~~~~~~~~l~~~l~~~~~~~~-~~v~~~~-sgteA~~~al~~~~~~~~~~ 121 (430)
+++|.+++++.+.+.... ++.....+...+..+.|.+++..+. -+|+|.+ |||.++++++..+..
T Consensus 16 p~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nll~----- 90 (364)
T PRK12462 16 PDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNFSR----- 90 (364)
T ss_pred CHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHcCC-----
Confidence 789999999877653321 1111222556677788888886421 2555555 699999999887764
Q ss_pred CCCCCcEEE-EEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeC--CCCCC-CCCCCCChhHHHHHHHHHHHHHHHh
Q psy14484 122 GFLNKKKFI-CLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIIT--TPDSR-NINKGNSANEIARCAIFDLEILLKK 197 (430)
Q Consensus 122 g~~~~~~vl-~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~d~~~le~~l~~ 197 (430)
++++++ ....++.|....-.+. .+ . ++..+. .+..+ ..+ +++++ +.
T Consensus 91 ---~g~~~~~~~~tG~fg~r~~~ea~--------~~---g-~v~~~~~~~~~~~~~~p-----------~~~~~----~~ 140 (364)
T PRK12462 91 ---PGAAAPEYVTTGYWSRKAIGEAS--------RV---A-AMRVVWDGAASGYRTLP-----------SLAEL----DW 140 (364)
T ss_pred ---CCCcEEEEEeCCHHHHHHHHHHH--------hc---C-CceEecCcCCCCCCcCC-----------CHHHh----cc
Confidence 344344 4444444432111110 00 0 111111 00000 000 33332 21
Q ss_pred CCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeee--cccCC
Q psy14484 198 NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITG 275 (430)
Q Consensus 198 ~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s--K~l~g 275 (430)
..+.+.|.+.+ ....+|+..+ ++.+.+++++|+|-+-+ ++ +..+.++.+ |++..| |+++.
T Consensus 141 -~~d~~~v~~t~-NETstGv~~~---------~~~~~~~~llvvD~sS~-~~--s~pid~~~~----dvi~agsQKnlgP 202 (364)
T PRK12462 141 -DARAPFRHYVS-NETVEGLQFP---------DAAGLPDSPLIADMSSD-FM--SRPFDVEAY----GMVYAHAQKNLGP 202 (364)
T ss_pred -CCCCcEEEEcc-CCCCceEecC---------cccccCCCeEEEEcCch-hh--CCCCChHHc----cEEEeeccccCCC
Confidence 23466677766 6667786665 23334689999998754 42 122333333 767655 99974
Q ss_pred CccccEEEEEcHHHHHhhhccCCcccc-------cccCCC-CCCHHHHHHHHHHHHHHhhc--C---HHHHHHHHHHHHH
Q psy14484 276 GYLPLSLVMTTDKIYNSIYYKNNINIF-------LHSHSY-SGNPLACCAALATLEIFNKD--N---ILQRISQDMKKIT 342 (430)
Q Consensus 276 G~~~ig~~~~~~~~~~~~~~~~~~~~~-------~~~~t~-~~~~~~~~aa~~~l~~~~~~--~---~~~~~~~~~~~l~ 342 (430)
..++.++.+++.++..... .+ .+ ...+++ +++.....+...+|+.+.++ + ..++-++.++.++
T Consensus 203 --~Gltvvivs~~al~~~~~~-~p-~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly 278 (364)
T PRK12462 203 --AGVTVAIIRRALLERVPDT-LP-PMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLY 278 (364)
T ss_pred --CceEEEEECHHHHhhcccc-CC-chhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 4588999999887665431 00 11 022344 44556777888888887655 4 4456677788888
Q ss_pred HHHHchh-cCCCeeeEeecceE-EEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC---CEEEEeCCCCCCHHHHHHH
Q psy14484 343 KALTSLI-THPKIINFRQKGMI-WAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG---NTVYLMPPYILNKNEIQHM 417 (430)
Q Consensus 343 ~~l~~l~-~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~---~~lR~~~~~~~t~e~i~~~ 417 (430)
+.++++. -+........+..+ +.|.+. + ..+..+|.+.+.++|+..-.++ +.+|.++=-.++.|.++.+
T Consensus 279 ~~id~~~~~~~~~~~~~~RS~mnv~f~~~-~-----~~l~~~f~~~a~~~gl~~lkGhr~vgg~Ras~yna~~~e~v~~L 352 (364)
T PRK12462 279 ATLDALNEVIDCHAHRAARSTMNVAFRFR-Q-----PRLDTLFKEQSTEAGFCGLSGHRSIGGIRASLYNAVSEQAVSRL 352 (364)
T ss_pred HHHHhCCCcccCCCChhhcCcceEEEEcC-C-----HHHHHHHHHHHHHCCCccccCCcccCceEEEcCCCCCHHHHHHH
Confidence 8887763 22222222223333 233333 2 2234689999999999876553 5689988888899999999
Q ss_pred HHHHHHHHH
Q psy14484 418 TSAIFQTFN 426 (430)
Q Consensus 418 ~~~l~~~l~ 426 (430)
++-+++.-+
T Consensus 353 ~~fm~~f~~ 361 (364)
T PRK12462 353 CAFLKDFAI 361 (364)
T ss_pred HHHHHHHHH
Confidence 988877643
No 365
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.14 E-value=8.3e-08 Score=88.35 Aligned_cols=319 Identities=15% Similarity=0.140 Sum_probs=181.0
Q ss_pred CCCHHHHHHHHHHHh-hccccc---cCCCCC---HHHHHHH-HHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhc
Q psy14484 50 HSNSYINKALKNQLN-KLEHVM---LSNLTH---KPVIKLS-EKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNK 121 (430)
Q Consensus 50 ~~~p~v~~a~~~~~~-~~~~~~---~~~~~~---~~~~~l~-~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~ 121 (430)
+.+|.|++|.-..+. ++.... +.++.. +..+.++ ++..++++++..+|-. .||++||.++..++..
T Consensus 37 ~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~anVQP-hSGs~AN~av~~All~----- 110 (413)
T COG0112 37 FTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQP-HSGSQANQAVYLALLQ----- 110 (413)
T ss_pred cCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCccccCC-CCchHHHHHHHHHHcC-----
Confidence 357899998877664 333221 112222 3333333 5566778554444442 5999999999988876
Q ss_pred CCCCCcEEEEEcCCCCCcchhh--hccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCC
Q psy14484 122 GFLNKKKFICLQNSYHGETLGA--LAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNH 199 (430)
Q Consensus 122 g~~~~~~vl~~~~~yhg~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~ 199 (430)
++++|+..+-..-||..-. ...++ .....++++-+.... .-|.|++++...++
T Consensus 111 ---pGDtimgm~l~~GGHltHg~~v~~sG------------~~~~~v~Y~vd~et~---------~IDyD~~~k~a~e~- 165 (413)
T COG0112 111 ---PGDTIMGLDLSHGGHLTHGSPVNFSG------------KLFNVVSYGVDPETG---------LIDYDEVEKLAKEV- 165 (413)
T ss_pred ---CCCeEecccCCCCCcccCCCCCCccc------------eeEEeEecccccccC---------ccCHHHHHHHHHHh-
Confidence 7889998877666663221 11122 112334443221100 12889999999875
Q ss_pred CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-CCCCcccccccccCCCCCceeeee--cccCCC
Q psy14484 200 NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-GCGRTGKFFACEHAEIWPDFLCLS--KGITGG 276 (430)
Q Consensus 200 ~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~-g~g~~g~~~~~~~~~~~~d~~~~s--K~l~gG 276 (430)
+++++++= .+..--..+ +++++++|++.|++|++|-+|- |+--.|. +. .... ..|++|-+ |.|-|
T Consensus 166 -kPK~ii~G---~SaY~r~id----~~~~reIad~VGA~L~~DmAHiaGLVA~G~-~p-~P~~-~AdvVTtTTHKTlrG- 233 (413)
T COG0112 166 -KPKLIIAG---GSAYSRPID----FKRFREIADEVGAYLMVDMAHVAGLIAGGV-HP-NPLP-HADVVTTTTHKTLRG- 233 (413)
T ss_pred -CCCEEEEC---ccccccccC----HHHHHHHHHHhCceEEehHHHHHHHHhccc-CC-CCCC-ccceEeCCcccCCCC-
Confidence 56667762 233332333 8999999999999999998875 4422221 11 1111 36888655 88877
Q ss_pred ccccEEEEEcH-HHHHhhhccCCcccccccCCCCCCHH--HHHHHHHHHHHHhhcC---HHHHHHHHHHHHHHHHHchhc
Q psy14484 277 YLPLSLVMTTD-KIYNSIYYKNNINIFLHSHSYSGNPL--ACCAALATLEIFNKDN---ILQRISQDMKKITKALTSLIT 350 (430)
Q Consensus 277 ~~~ig~~~~~~-~~~~~~~~~~~~~~~~~~~t~~~~~~--~~~aa~~~l~~~~~~~---~~~~~~~~~~~l~~~l~~l~~ 350 (430)
-+-|.++++. ++.+.+.. ....+. .++|+ .+++-..++....+++ +.+++.++++.|.+.|.+. .
T Consensus 234 -PrGG~Il~~~eel~kkin~------aVFPg~-qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G 304 (413)
T COG0112 234 -PRGGIILTNDEELAKKINS------AVFPGL-QGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER-G 304 (413)
T ss_pred -CCceEEEeccHHHHHHhhh------hcCCcc-CCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc-C
Confidence 4678888884 77777765 112222 23333 2332223344333444 4566777888888888764 3
Q ss_pred CCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEee----c-------CCEEEEeCCCC----CCHHHHH
Q psy14484 351 HPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP----I-------GNTVYLMPPYI----LNKNEIQ 415 (430)
Q Consensus 351 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~----~-------~~~lR~~~~~~----~t~e~i~ 415 (430)
+..+..-. ...++.+++. +... . .......|.+-||.+.. . ...||+..+.. +.++|..
T Consensus 305 ~~vvsGgT-dnHl~lVDl~-~~~~-~---Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~ 378 (413)
T COG0112 305 FKVVSGGT-DNHLVLVDLR-SKGL-T---GKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEME 378 (413)
T ss_pred CeEecCCc-cceEEEEEcc-cCCC-C---HHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHH
Confidence 33332111 2234445554 3211 1 13444555566887752 1 24688765543 3678888
Q ss_pred HHHHHHHHHHH
Q psy14484 416 HMTSAIFQTFN 426 (430)
Q Consensus 416 ~~~~~l~~~l~ 426 (430)
++.+.|.+++.
T Consensus 379 ~Ia~~I~~vl~ 389 (413)
T COG0112 379 EIADLIADVLD 389 (413)
T ss_pred HHHHHHHHHHh
Confidence 88888877765
No 366
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.14 E-value=3.4e-09 Score=100.55 Aligned_cols=319 Identities=15% Similarity=0.107 Sum_probs=159.3
Q ss_pred CCHHHHHHHHHHHhh-cccc---ccCCCCCHH---HHH-HHHHHHhhcCCCCC--eEEE-cCCchHHHHHHHHHHHHhhh
Q psy14484 51 SNSYINKALKNQLNK-LEHV---MLSNLTHKP---VIK-LSEKLSSLTQYKLG--HCFY-GSDGASAVEVALKMSFHYWY 119 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~-~~~~---~~~~~~~~~---~~~-l~~~l~~~~~~~~~--~v~~-~~sgteA~~~al~~~~~~~~ 119 (430)
.+|.+++++...+.. +... .+.....+. .+. ..+...+++++.++ .+-+ ..||+.||.+++.++..
T Consensus 32 ~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aLl~--- 108 (399)
T PF00464_consen 32 MSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQANLAVYMALLK--- 108 (399)
T ss_dssp --HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHHT----
T ss_pred cCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCchHHHHHHHHHHHh---
Confidence 467777776654432 2211 111222222 233 33556677865544 2322 24999999999988876
Q ss_pred hcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC-CCCCCCCCCChhHHHHHHHHHHHHHHHhC
Q psy14484 120 NKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP-DSRNINKGNSANEIARCAIFDLEILLKKN 198 (430)
Q Consensus 120 ~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~le~~l~~~ 198 (430)
++++|+.++...-||..-........ ........+....+++ +.... |.+++++.+.++
T Consensus 109 -----pGD~Im~l~l~~GGHlshg~~~~~~~---~~~~~~~~~~~~y~~d~~~~~I------------D~d~l~~~a~~~ 168 (399)
T PF00464_consen 109 -----PGDTIMGLSLPHGGHLSHGSSVNFKK---ISASGLYFESVPYPVDPDTGLI------------DYDELEKLAKEH 168 (399)
T ss_dssp -----TT-EEEEEEGGGT--GGGT-TTSHSB---SSHHHHHSEEEEEEB-TTTSSB-------------HHHHHHHHHHH
T ss_pred -----hcCcEEecChhhcccccccccccccc---cccccceEEEEeeeeecCCCeE------------CHHHHHHHHhhc
Confidence 78899998876655532111111000 0000011111222222 22222 899999999875
Q ss_pred CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-CCCCcccccccccCCCCCceeeee--cccCC
Q psy14484 199 HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-GCGRTGKFFACEHAEIWPDFLCLS--KGITG 275 (430)
Q Consensus 199 ~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~-g~g~~g~~~~~~~~~~~~d~~~~s--K~l~g 275 (430)
++++|++-. +.. |-+--+++++++|++.|++|++|-+|. |+-- |..+. +.+. ..|+++.| |.|.|
T Consensus 169 --kPklIi~G~---S~y----~~~~d~~~~reIad~vga~l~~D~sH~~GLIa-~g~~~-~P~~-~ADvvt~sThKtl~G 236 (399)
T PF00464_consen 169 --KPKLIICGA---SSY----PRPIDFKRFREIADEVGAYLMADISHIAGLIA-GGLFP-NPFP-YADVVTGSTHKTLRG 236 (399)
T ss_dssp ----SEEEEE----SST----SS---HHHHHHHHHHTT-EEEEE-TTTHHHHH-TTSS---GCC-TSSEEEEESSGGG-S
T ss_pred --CCCEEEECc---hhc----cCccCHHHHHHHHHhcCcEEEeccccccccee-hheec-Cccc-cceEEEeeccccccc
Confidence 567788765 221 222227999999999999999998876 4311 11111 1122 27999877 88887
Q ss_pred CccccEEEEEc--------------HHHHHhhhccCCcccccccCCCCCCHH-HHHHHHHHHHHHhh---cCHHHHHHHH
Q psy14484 276 GYLPLSLVMTT--------------DKIYNSIYYKNNINIFLHSHSYSGNPL-ACCAALATLEIFNK---DNILQRISQD 337 (430)
Q Consensus 276 G~~~ig~~~~~--------------~~~~~~~~~~~~~~~~~~~~t~~~~~~-~~~aa~~~l~~~~~---~~~~~~~~~~ 337 (430)
-+-|.++++ +++.+.+.. ....+..++... ..++-..+|..... .++.+++.++
T Consensus 237 --PrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~------avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~N 308 (399)
T PF00464_consen 237 --PRGGIILTNKGSKNVDKKGKEIDEELAEKIDS------AVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKN 308 (399)
T ss_dssp --SS-EEEEES-SEEEE-TTS-EEEHHHHHHHHH------HHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred --cCceEEEEcCCccccCCcccccHHHHHHHhcc------ccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHH
Confidence 467889999 677777665 111122222222 22222233443322 3566777888
Q ss_pred HHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec----------CCEEEEeCCC
Q psy14484 338 MKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI----------GNTVYLMPPY 407 (430)
Q Consensus 338 ~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~----------~~~lR~~~~~ 407 (430)
++.|.+.|.+. ++..+..- -...++.+++. .... . ..+..+.|.+.||.+... +..||+..+.
T Consensus 309 Ak~La~~L~~~-G~~v~~gg-Td~H~vlvd~~-~~~~--~--g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~ 381 (399)
T PF00464_consen 309 AKALAEALQER-GFKVVTGG-TDNHQVLVDLR-SFGI--D--GKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPA 381 (399)
T ss_dssp HHHHHHHHHHT-T-EEGGGS--SSSEEEEEGG-GGTS-----HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHH
T ss_pred HHHHHHHHhhC-CcEEEECC-CCCCeEEEEec-cccc--c--hHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHH
Confidence 88888888765 33322211 23345556654 3111 1 246777888899998642 2579987543
Q ss_pred C----CCHHHHHHHHH
Q psy14484 408 I----LNKNEIQHMTS 419 (430)
Q Consensus 408 ~----~t~e~i~~~~~ 419 (430)
. ..++|+.++.+
T Consensus 382 lT~rG~~e~dm~~iA~ 397 (399)
T PF00464_consen 382 LTRRGMKEEDMKEIAE 397 (399)
T ss_dssp HHHTT--HHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHh
Confidence 2 25566555443
No 367
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.10 E-value=1.6e-07 Score=94.32 Aligned_cols=245 Identities=14% Similarity=0.099 Sum_probs=138.6
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhh-----hcCCC------------------------
Q psy14484 74 LTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWY-----NKGFL------------------------ 124 (430)
Q Consensus 74 ~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~-----~~g~~------------------------ 124 (430)
..+....++.++|+++++.+...-.||+|||+||..|+.+||.... ....+
T Consensus 120 ~~t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~ 199 (608)
T TIGR03811 120 ATSQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLE 199 (608)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhccccccccccccc
Confidence 3446777888999999975545567999999999999999987420 00000
Q ss_pred --------------------CCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCC---CeeEeCCCCCCCCCCCCChh
Q psy14484 125 --------------------NKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLN---KTYIITTPDSRNINKGNSAN 181 (430)
Q Consensus 125 --------------------~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 181 (430)
.+..++..+..-|-+ +.+....+.. .++.+|.+..++.
T Consensus 200 ~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS------------~~KAa~ilGlG~~~vv~VpvD~~~rm------- 260 (608)
T TIGR03811 200 SAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYS------------WLKAADIIGIGLDQVIPVPVDSNYRM------- 260 (608)
T ss_pred ccccchhhhhhhccccccccccceEEEECCCccHH------------HHHHHHHcCCCcccEEEeecCCCCcC-------
Confidence 000012222222322 1222222222 3456666665555
Q ss_pred HHHHHHHHHHHHHHHhC---CCCeEEEEEccccccCCCcccCChHHHHHHHHHH---HhcCC--EEEEeccccCCCCc--
Q psy14484 182 EIARCAIFDLEILLKKN---HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC---NNYNI--HLIADEIAVGCGRT-- 251 (430)
Q Consensus 182 ~~~~~d~~~le~~l~~~---~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~---~~~gi--~li~DEv~~g~g~~-- 251 (430)
|+++|+++|++. ...+.+|+..- ...+.|.+-| +++|.++| +++|+ ++|||.++.|+.+.
T Consensus 261 -----d~~~L~~~I~~~~~~g~p~~~VVata-GTT~~GaiDp----l~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~ 330 (608)
T TIGR03811 261 -----DINELEKIIRKLAAEKTPILGVVGVV-GSTEEGAVDG----IDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIF 330 (608)
T ss_pred -----CHHHHHHHHHHHHhcCCCeEEEEEEc-CCcCCcccCC----HHHHHHHHHHHHHcCCceeEeeeccccchhhhhh
Confidence 899999998753 22455666666 7777888888 99998888 77898 69999999986421
Q ss_pred -c---cccc-------------c-------------ccCCC-CCceeeee--cccCCCccccEEEEEcHH-HHHhhhcc-
Q psy14484 252 -G---KFFA-------------C-------------EHAEI-WPDFLCLS--KGITGGYLPLSLVMTTDK-IYNSIYYK- 296 (430)
Q Consensus 252 -g---~~~~-------------~-------------~~~~~-~~d~~~~s--K~l~gG~~~ig~~~~~~~-~~~~~~~~- 296 (430)
. .... + ...++ ..|=+|+. |.+.-. ++.|+++.+.. +.+.+...
T Consensus 331 ~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~P-y~~G~ll~Rd~~~~~~~~~~a 409 (608)
T TIGR03811 331 LDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIP-YSAGGIVIQDIRMRDVISYFA 409 (608)
T ss_pred ccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccC-CCeEEEEEeCHHHHHHHhcCc
Confidence 0 0000 0 00122 24555554 655444 57888888754 33333220
Q ss_pred ------CCccc-ccccCCCCCCH--HHHHHHHHHHHHH--hhc---CHHHHHHHHHHHHHHHHHch
Q psy14484 297 ------NNINI-FLHSHSYSGNP--LACCAALATLEIF--NKD---NILQRISQDMKKITKALTSL 348 (430)
Q Consensus 297 ------~~~~~-~~~~~t~~~~~--~~~~aa~~~l~~~--~~~---~~~~~~~~~~~~l~~~l~~l 348 (430)
+...+ .....+..++. ...++.+.+++.+ ..+ .+..+..++++++.+.|++.
T Consensus 410 ~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 410 TYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred chhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 00000 00011222232 3345566677765 333 34455666788888888763
No 368
>KOG2040|consensus
Probab=99.09 E-value=3.2e-08 Score=95.59 Aligned_cols=312 Identities=16% Similarity=0.176 Sum_probs=196.9
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEEcC-CchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhh
Q psy14484 77 KPVIKLSEKLSSLTQYKLGHCFYGS-DGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEI 155 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~v~~~~-sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~ 155 (430)
....+|.+.|++.. +.|.+.|-+ ||.+.-.+.++.+|.|...+|. +...|...+-+.||.......+.+.
T Consensus 582 ~lf~~Le~~Lc~iT--G~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge-~hRnvClIPvSAHGTNPASA~Magm------ 652 (1001)
T KOG2040|consen 582 QLFTELEKDLCEIT--GFDSFSLQPNSGAQGEYAGLRVIRAYLESKGE-GHRNVCLIPVSAHGTNPASAAMAGM------ 652 (1001)
T ss_pred HHHHHHHHHhheee--cccceeecCCCCcccchhhHHHHHHHHHhccC-CcceeEEEeecccCCChhhHHhcCC------
Confidence 55668888888888 777777765 9999999999999999988887 5566777778999987666665542
Q ss_pred hhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhc
Q psy14484 156 YTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNY 235 (430)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~ 235 (430)
.++.+........ |+.+|+....+|.++.+++++.- + +..|..-+. ++++.++.++|
T Consensus 653 ------kvvpV~~~~~G~i------------d~~dLk~kaekh~~~Laa~MvTY-P-ST~GvfE~~---i~d~cd~iHeh 709 (1001)
T KOG2040|consen 653 ------KVVPVGCDANGNI------------DMVDLKAKAEKHKDNLAALMVTY-P-STHGVFEEG---IDDICDIIHEH 709 (1001)
T ss_pred ------EEEEeeccCCCCc------------cHHHHHHHHHHhhhhhheeEEec-c-ccccccccc---HHHHHHHHHhc
Confidence 2233333332222 88899999998888888888764 3 444545443 89999999999
Q ss_pred CCEEEEecc----ccCCCCcccccc-cccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccC--------Ccccc
Q psy14484 236 NIHLIADEI----AVGCGRTGKFFA-CEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKN--------NINIF 302 (430)
Q Consensus 236 gi~li~DEv----~~g~g~~g~~~~-~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~--------~~~~~ 302 (430)
|.-+..|-+ |.|+.+.|..++ ..++++. -||.=.-|||+-.+|.+.+++.+...+-..+ ...++
T Consensus 710 GGQVYlDGANMNAqVGlc~pGd~GaDV~HLNLH---KTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~ 786 (1001)
T KOG2040|consen 710 GGQVYLDGANMNAQVGLCRPGDIGADVCHLNLH---KTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPV 786 (1001)
T ss_pred CCEEEecCCCccceecccCCccccccceeeccc---ceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCc
Confidence 999999954 557766664322 2222221 1344344555456788888877765443210 00000
Q ss_pred c-ccCCCCCCHHHHHHHHHHHHHHhhcCHHH---HHHHHHHHHHHHHHchhcCCCeeeEeecceEEE----EEEeecCCc
Q psy14484 303 L-HSHSYSGNPLACCAALATLEIFNKDNILQ---RISQDMKKITKALTSLITHPKIINFRQKGMIWA----FDVIIEDPE 374 (430)
Q Consensus 303 ~-~~~t~~~~~~~~~aa~~~l~~~~~~~~~~---~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~----~~~~~~~~~ 374 (430)
. .++.-.++...+...++.++++...++.+ ..--++.|+.++|+. .++.+. ....| +.+ +++. +-+.
T Consensus 787 gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~--hYkil~-~~~~~-~vaHEFIlD~r-~fK~ 861 (1001)
T KOG2040|consen 787 GSVSAAPWGSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLES--HYKILF-RGENG-LVAHEFILDLR-PFKK 861 (1001)
T ss_pred cceeccCCCcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhh--ccceeE-ecCCc-ceeeeeeeech-hhcc
Confidence 0 01111233444556778888887655543 334477888888875 333322 11122 323 2332 2111
Q ss_pred cchhHHHHHHHHHHHCCcEEe----ecCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 375 QIETFSKKFFVAALKNELLLR----PIGNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 375 ~~~~~a~~~~~~l~~~Gv~~~----~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+..--+..++++|...|+... |-.+++.+-|.-.-+++|+|++++++-.+-+++
T Consensus 862 ~agieavDvAKRL~DYgFHaPTmswPV~gtLMIEPTESE~k~ElDRfcdAliSIreEI 919 (1001)
T KOG2040|consen 862 TAGIEAVDVAKRLMDYGFHAPTMSWPVAGTLMIEPTESEDKAELDRFCDALISIREEI 919 (1001)
T ss_pred ccCCcHHHHHHHHHhccCCCCccccccCCceEeccCccccHHHHHHHHHHHHHHHHHH
Confidence 110115678999999988643 335899999998889999999999987765543
No 369
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.08 E-value=3.9e-08 Score=99.69 Aligned_cols=303 Identities=11% Similarity=0.030 Sum_probs=160.9
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhh-hccCC-Cccchh
Q psy14484 77 KPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGA-LAVTN-IQSFKE 154 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~-~~~~~-~~~~~~ 154 (430)
....+.++..++.++++ ...+++||.|.+|.+++.+++. ++++ |.++...|-+..-+ +.+++ .|.|-
T Consensus 174 G~i~eAq~~AA~~fgAd-~tyFlvNGTS~gn~a~i~a~~~--------~Gd~-VLvdRN~HKSv~hgaLiLsGa~PVYl- 242 (720)
T PRK13578 174 GAAKDAQKHAAKVFNAD-KTYFVLNGTSASNKVVTNALLT--------PGDL-VLFDRNNHKSNHHGALIQAGATPVYL- 242 (720)
T ss_pred hHHHHHHHHHHHHhCCC-ceEEEeCChhHHHHHHHHHhcC--------CCCE-EEeecccHHHHHHHHHHHcCCeEEEe-
Confidence 34456667777788422 3456677888888888887764 4454 45688888876543 44444 22221
Q ss_pred hhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhC-CC-------CeEEEEEccccccCCCcccCChHHHH
Q psy14484 155 IYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKN-HN-------KIAAIIIEPLVQCAGGMIMYDSIYLK 226 (430)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~-~~-------~~~~vi~ep~v~~~~G~~~~~~~~l~ 226 (430)
.|.-+.+....+.+.+++ +.+.++++|+++ ++ -.++|++.| +=.|.... ++
T Consensus 243 -----------~P~~n~~Gi~g~I~~~~~---~~~~i~~~i~~~~p~~~~~~~p~k~vvit~p---TYdG~~yd----i~ 301 (720)
T PRK13578 243 -----------ETARNPFGFIGGIDAHCF---DEEYLREQIREVAPERADEARPFRLAVIQLG---TYDGTIYN----AR 301 (720)
T ss_pred -----------eccccccCCcCCCChHHc---cHHHHHHHHHhcCccccccccCceEEEEECC---CCcceeec----HH
Confidence 111111222223333333 356788888876 32 134555555 22364444 88
Q ss_pred HHHHH-HHhcCCEEEEeccccCCCCcccc---cccccCCCCCc----eeeee--cccCCCccccEEEEEcH---------
Q psy14484 227 LVREI-CNNYNIHLIADEIAVGCGRTGKF---FACEHAEIWPD----FLCLS--KGITGGYLPLSLVMTTD--------- 287 (430)
Q Consensus 227 ~l~~l-~~~~gi~li~DEv~~g~g~~g~~---~~~~~~~~~~d----~~~~s--K~l~gG~~~ig~~~~~~--------- 287 (430)
.|.+. |++++ +|++||++.+...-... +.-......+| +++-| |.+++= ..-+++-.+.
T Consensus 302 ~I~~~~~h~~~-~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~al-TQaS~LHvk~~~i~g~~~~ 379 (720)
T PRK13578 302 QVVDKIGHLCD-YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGF-SQTSQIHKKDNHIKGQARY 379 (720)
T ss_pred HHHHHhhccCC-cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchhh-hhHhhhhcCCccccccccc
Confidence 89888 68888 99999998754221111 11111234566 77666 765541 1123333322
Q ss_pred ----HHHHhhhccCCcccccccCCCCCCHHHHHHHHHH-HHHHh---hcCHHHHHHHHHHHHHHHH-HchhcCCCee--e
Q psy14484 288 ----KIYNSIYYKNNINIFLHSHSYSGNPLACCAALAT-LEIFN---KDNILQRISQDMKKITKAL-TSLITHPKII--N 356 (430)
Q Consensus 288 ----~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~-l~~~~---~~~~~~~~~~~~~~l~~~l-~~l~~~~~~~--~ 356 (430)
.+.+.+.. +.+|. ++-+- .|++.+ -.+++ ...+.+...+.+..+|+.| +.+..+..+. .
T Consensus 380 v~~~r~~~al~m--------~qSTS-PsY~L-mASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~ 449 (720)
T PRK13578 380 CPHKRLNNAFML--------HASTS-PFYPL-FAALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPFIPPV 449 (720)
T ss_pred CCHHHHHHHHHH--------HcCCC-hHHHH-HHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeeccccc
Confidence 22222322 33333 33222 233322 23332 2456677777888888877 4332221110 0
Q ss_pred Ee-----------------------e----------------cceEEEEEEeecCCccchh------HHHHHHHHHHHCC
Q psy14484 357 FR-----------------------Q----------------KGMIWAFDVIIEDPEQIET------FSKKFFVAALKNE 391 (430)
Q Consensus 357 ~~-----------------------~----------------~g~~~~~~~~~~~~~~~~~------~a~~~~~~l~~~G 391 (430)
+. + .-+=+.+... .-...... -+..+.+.|.++|
T Consensus 450 v~~~~~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~KltI~t~-G~~~~~G~~~~~Gipg~~l~~~L~e~g 528 (720)
T PRK13578 450 VDGKPWQDYPTEQIASDLRFFSFEPGEKWHGFEGYAEDQYFVDPCKLLLTTP-GIDAETGEYEDFGIPATILANYLRENG 528 (720)
T ss_pred ccccccccCchhhhcccccccccccCccccccccccccccccCCceEEEEcC-CcCcccccccccCccHHHHHHHHHHcC
Confidence 00 0 0000111111 10000000 0357888898889
Q ss_pred cEEeecC-CEEEEeCCCCCCHHHHHHHHHHHHHH
Q psy14484 392 LLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQT 424 (430)
Q Consensus 392 v~~~~~~-~~lR~~~~~~~t~e~i~~~~~~l~~~ 424 (430)
|.+..++ ..+-|.++...|+++++.++++|.+.
T Consensus 529 I~~E~~d~~~vL~l~s~g~t~~~~~~Lv~aL~~f 562 (720)
T PRK13578 529 IVPEKCDLNSILFLLTPAEDMAKLQQLVAMLARF 562 (720)
T ss_pred CEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 9998775 67778888899999999999999866
No 370
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.04 E-value=1.4e-07 Score=85.40 Aligned_cols=361 Identities=13% Similarity=0.106 Sum_probs=185.7
Q ss_pred EEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHH
Q psy14484 27 SLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASA 106 (430)
Q Consensus 27 ~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA 106 (430)
++.+ .+..++|+....|.... ..+- ..++..+.. .+..+..+..|++...+.+ +.+.++.+.-|-.|
T Consensus 40 F~l~-Sedv~IDLLTDSGTgam---s~~q----waamm~GDE---AYagsrs~~~L~~avkdif--Gfq~~iPthQGRgA 106 (471)
T COG3033 40 FLLD-SEDVFIDLLTDSGTGAM---TDKQ----WAAMMRGDE---AYAGSRSYYALADAVKDIF--GFQYTIPTHQGRGA 106 (471)
T ss_pred eecc-ccceEEEeeccCCcccc---cHHH----HHHHhccch---hhcccccHHHHHHHHHHhc--CceeeeeccCCccH
Confidence 4444 45688998876544322 1111 112222221 1334556678888888888 67899999988888
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 186 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (430)
-...+..+.... . .-+..+.++++..|.-.+-+.....+.- .+..+.+-..+ ..+..|.... -
T Consensus 107 E~Il~~i~ik~~-~--~~pg~~~~~~sN~~FdTTr~h~~~ng~~-~~n~~~~ea~d-~~~~~pFKGd------------~ 169 (471)
T COG3033 107 ENILIPILIKKG-E--QEPGSKMVAFSNYHFDTTRGHIQINGAT-PRNVYVDEAFD-TEVKYPFKGN------------F 169 (471)
T ss_pred HHHHHHHHhhhc-c--ccCCccccccccceecchhHHHHhcCCc-ccccccccccc-ccccCCCCCc------------c
Confidence 776666555421 0 0133455555555544443333333211 11111110000 0111222111 2
Q ss_pred HHHHHHHHHHhC-CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc----CCCCcccccccccCC
Q psy14484 187 AIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV----GCGRTGKFFACEHAE 261 (430)
Q Consensus 187 d~~~le~~l~~~-~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~----g~g~~g~~~~~~~~~ 261 (430)
|++.|++.|++. .+++..|++.- .+|+.|..+-+-+-++++.++|++|||+++.|.+.- -|-+..... ...+.
T Consensus 170 D~~kLe~lidevG~~nvp~I~~ti-T~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~g-Yrd~s 247 (471)
T COG3033 170 DLEKLERLIDEVGADNVPYIVLTI-TNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPG-YRDWS 247 (471)
T ss_pred CHHHHHHHHHHhCcccCcEEEEEE-eccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcc-ccccc
Confidence 899999999987 34566555544 555556677888889999999999999999997632 011110000 00111
Q ss_pred C---------CCceeeee-c--ccCCCccccEE-EEEcHH----HHHhhhccCCcccccccCCCCCCHH-HHHHHHHHHH
Q psy14484 262 I---------WPDFLCLS-K--GITGGYLPLSL-VMTTDK----IYNSIYYKNNINIFLHSHSYSGNPL-ACCAALATLE 323 (430)
Q Consensus 262 ~---------~~d~~~~s-K--~l~gG~~~ig~-~~~~~~----~~~~~~~~~~~~~~~~~~t~~~~~~-~~~aa~~~l~ 323 (430)
+ ..|-.++| | ++ ..+|. ++.+.+ +...+.. ..-...-..|+++-.- .+.+....|+
T Consensus 248 I~~IarEm~sYaD~~~mS~KKD~l----vnmGGfl~~~D~~~fDvy~~~~~--~~V~~eG~~tYGgl~GrdmealAvGL~ 321 (471)
T COG3033 248 IEEIAREMYSYADGCTMSAKKDGL----VNMGGFLCFKDDSFFDVYEECRT--LVVVQEGFPTYGGLAGRDMEALAVGLR 321 (471)
T ss_pred HHHHHHHHHhhhhhheeeccccce----eccccEEEecCccHHHHHHHHHh--heEeeccccccCcccchhHHHHHHHHH
Confidence 1 24555666 3 33 34454 444544 4444332 0000011234433211 1222222344
Q ss_pred HHhhcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhH-HHHHHHHH-HHCCcEEee-----
Q psy14484 324 IFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETF-SKKFFVAA-LKNELLLRP----- 396 (430)
Q Consensus 324 ~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-a~~~~~~l-~~~Gv~~~~----- 396 (430)
..-+.++.++--+..++|.++|.+. +.|++..+-|-+.++-..-. -...+.+.| ++.|+-.| ++.||-...
T Consensus 322 e~~~~~yl~~Rv~Qv~YL~~~l~~~-GVpi~~paGGHavfvda~~~-lphip~eqFpaqala~ely~e~GiRavElG~~~ 399 (471)
T COG3033 322 EGVNFDYLAHRVAQVQYLADGLEEA-GVPIVQPAGGHAVFVDAGKF-LPHIPAEQFPAQALACELYKEAGIRAVELGSFS 399 (471)
T ss_pred HhcCcHHHHHHHHHHHHHHHHHHhc-CCeeEecCCCceEEeehhhh-cCCCChhhCcHHHHHHHHHHHhCeeeeeeecee
Confidence 3334566666666788999999876 44544444443333321100 001111111 34444444 344654432
Q ss_pred ------------c-CCEEEEeCCCCC-CHHHHHHHHHHHHHHHHH
Q psy14484 397 ------------I-GNTVYLMPPYIL-NKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 397 ------------~-~~~lR~~~~~~~-t~e~i~~~~~~l~~~l~~ 427 (430)
+ -+.+|++++... |.+++|..++.+++....
T Consensus 400 ~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~ 444 (471)
T COG3033 400 LGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKEN 444 (471)
T ss_pred cccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHhc
Confidence 0 157899888765 999999999999887753
No 371
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.03 E-value=2.6e-07 Score=93.74 Aligned_cols=299 Identities=10% Similarity=0.087 Sum_probs=161.3
Q ss_pred HHHHHHHHHHhhcCCCCCe-EEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCC-ccchhh
Q psy14484 78 PVIKLSEKLSSLTQYKLGH-CFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNI-QSFKEI 155 (430)
Q Consensus 78 ~~~~l~~~l~~~~~~~~~~-v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~-~~~~~~ 155 (430)
...+.++..++.++ .++ .+++||.|.+|.+++.+++. ++++ |.++...|-+..-++.+++. |.|-.
T Consensus 196 ~i~eAe~~aA~~fg--Ad~tyfvvNGTS~~n~av~~a~~~--------~Gd~-VLvdRN~HKSv~~aLilsga~PVYl~- 263 (713)
T PRK15399 196 PHLEAEEYIARTFG--AEQSYIVTNGTSTSNKIVGMYAAP--------AGST-LLIDRNCHKSLAHLLMMSDVVPIWLK- 263 (713)
T ss_pred HHHHHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHhcC--------CCCE-EEeecccHHHHHHHHHHcCCeeEEec-
Confidence 44456667777884 454 55667778888888877764 4454 44788888876655555542 22210
Q ss_pred hhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCC---eEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 156 YTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNK---IAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~---~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
|.-+.+....+.+.+++ +.+.++++++++++. .++|++.| +=.|.... ++.|.+.|
T Consensus 264 -----------P~~n~~Gi~g~I~~~~~---~~e~I~~~i~~~p~~~~p~~vvit~p---TYdGi~yd----~~~I~~~~ 322 (713)
T PRK15399 264 -----------PTRNALGILGGIPRREF---TRDSIEEKVAATTQAQWPVHAVITNS---TYDGLLYN----TDWIKQTL 322 (713)
T ss_pred -----------ccccccCCcCCCChhhc---cHHHHHHHHHhCCCcCCceEEEEECC---CCCceeeC----HHHHHHHh
Confidence 11111122222223233 458889999987642 35666666 23464444 77777777
Q ss_pred HhcCCEE-EEeccccCCCCcccc----cccccCCCCCcee---eee--cccCCCccccEEEEEcHH-----HHHhhhccC
Q psy14484 233 NNYNIHL-IADEIAVGCGRTGKF----FACEHAEIWPDFL---CLS--KGITGGYLPLSLVMTTDK-----IYNSIYYKN 297 (430)
Q Consensus 233 ~~~gi~l-i~DEv~~g~g~~g~~----~~~~~~~~~~d~~---~~s--K~l~gG~~~ig~~~~~~~-----~~~~~~~~~ 297 (430)
|+.+ ++||++.+...-.+. .+.. .+-.+|.+ +-| |.+++= ..-+++-.+.. +.+.+..
T Consensus 323 ---g~~~ilvDEAhgah~~F~p~~~~~sam~-~~~~aD~~i~~tQStHKtL~al-TQaS~iHvk~~vd~~~~n~a~~m-- 395 (713)
T PRK15399 323 ---DVPSIHFDSAWVPYTHFHPIYQGKSGMS-GERVPGKVIFETQSTHKMLAAF-SQASLIHIKGEYDEETFNEAFMM-- 395 (713)
T ss_pred ---CCCEEEEeccchhhhhcCcccCCcChhh-CCCCCCeeeeeeeehhcccccc-chheeeeecCCCCHHHHHHHHHH--
Confidence 6766 699998754221111 1221 11135766 444 766551 22344444332 2222222
Q ss_pred CcccccccCCCCCCHHHHHHHHHHHHHHh---hcCHHHHHHHHHHHHHHHHHchhc-CCCe-eeEee-------------
Q psy14484 298 NINIFLHSHSYSGNPLACCAALATLEIFN---KDNILQRISQDMKKITKALTSLIT-HPKI-INFRQ------------- 359 (430)
Q Consensus 298 ~~~~~~~~~t~~~~~~~~~aa~~~l~~~~---~~~~~~~~~~~~~~l~~~l~~l~~-~~~~-~~~~~------------- 359 (430)
+.+| +++-+-++..-.+-.+++ ...+.++..+.+..+++.+.++.. ...+ ..+-.
T Consensus 396 ------~~ST-SPsY~LmASLD~a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~ 468 (713)
T PRK15399 396 ------HTST-SPSYPIVASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVA 468 (713)
T ss_pred ------HcCC-CcHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecC
Confidence 3333 333333332222333443 245677788888888888876522 0000 00000
Q ss_pred ------------------cceEEEEEEeec-C---C-ccchhHHHHHHHHHHHCCcEEeecC-CEEEEeCCCCCCHHHHH
Q psy14484 360 ------------------KGMIWAFDVIIE-D---P-EQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQ 415 (430)
Q Consensus 360 ------------------~g~~~~~~~~~~-~---~-~~~~~~a~~~~~~l~~~Gv~~~~~~-~~lR~~~~~~~t~e~i~ 415 (430)
..+=+.+... . + . ....--+..+.+.|.++||.+..++ ..+-|.++...|+++++
T Consensus 469 p~~~whgf~~~~~~~~~lDP~KltI~t~-g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~~~~~ 547 (713)
T PRK15399 469 PGEQWHGFKDADADHMFLDPVKVTILTP-GMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAM 547 (713)
T ss_pred CCcccccccccccccccCCCceEEEEec-CcccccccccCCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHH
Confidence 0000111111 0 0 0 0000014578888999999998775 67778888899999999
Q ss_pred HHHHHHHHH
Q psy14484 416 HMTSAIFQT 424 (430)
Q Consensus 416 ~~~~~l~~~ 424 (430)
.++++|.+.
T Consensus 548 ~L~~aL~~f 556 (713)
T PRK15399 548 GLLRGLTEF 556 (713)
T ss_pred HHHHHHHHH
Confidence 999998765
No 372
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.00 E-value=1.4e-07 Score=95.73 Aligned_cols=301 Identities=9% Similarity=0.077 Sum_probs=161.1
Q ss_pred HHHHHHHHHHHhhcCCCCCe-EEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCC-ccchh
Q psy14484 77 KPVIKLSEKLSSLTQYKLGH-CFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNI-QSFKE 154 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~-v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~-~~~~~ 154 (430)
....+.++..++.+ +.++ .+++||.|.+|.+++.+++. ++++ |.++...|-+..-++.+++. |.|-.
T Consensus 195 G~i~eAe~~AA~~f--gAd~tyfvvNGTS~~n~av~~a~~~--------~Gd~-VLvdRN~HKSv~haLilsga~PVYl~ 263 (714)
T PRK15400 195 GPHKEAEEYIARVF--NADRSYMVTNGTSTANKIVGMYSAP--------AGST-VLIDRNCHKSLTHLMMMSDVTPIYFR 263 (714)
T ss_pred hHHHHHHHHHHHHh--CCCcEEEEeCchHHHHHHHHHHhcC--------CCCE-EEeecccHHHHHHHHHHcCCeEEEec
Confidence 34456667777788 4454 55566778888877777663 4444 55788889886666655552 22211
Q ss_pred hhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCe---EEEEEccccccCCCcccCChHHHHHHHHH
Q psy14484 155 IYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKI---AAIIIEPLVQCAGGMIMYDSIYLKLVREI 231 (430)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~---~~vi~ep~v~~~~G~~~~~~~~l~~l~~l 231 (430)
|.-+.+....+.+..++ +.+.++++++++++.. .+|++.| +=.|.... ++.|.+.
T Consensus 264 ------------P~rn~~Gi~g~I~~~~~---~~e~i~~~i~~~p~ak~p~~~vit~p---TYdG~~yd----~~~I~~~ 321 (714)
T PRK15400 264 ------------PTRNAYGILGGIPQSEF---QHATIAKRVKETPNATWPVHAVITNS---TYDGLLYN----TDFIKKT 321 (714)
T ss_pred ------------ccccccCCccCCCcccc---CHHHHHHHHHhCccccCccEEEEECC---CCccEecC----HHHHHHH
Confidence 10011111112222222 4688899998875422 4666666 23464444 8889999
Q ss_pred HHhcCCEEEEeccccCCCCccccc----ccccCCCC-Cc--eeeee--cccCCCccccEEEE----Ec-HHHHHhhhccC
Q psy14484 232 CNNYNIHLIADEIAVGCGRTGKFF----ACEHAEIW-PD--FLCLS--KGITGGYLPLSLVM----TT-DKIYNSIYYKN 297 (430)
Q Consensus 232 ~~~~gi~li~DEv~~g~g~~g~~~----~~~~~~~~-~d--~~~~s--K~l~gG~~~ig~~~----~~-~~~~~~~~~~~ 297 (430)
|+.++ +++||++.+...-...+ +.. .+-. .| +++-| |.+++= ..-+++- .. +.+.+.+..
T Consensus 322 ~~~~~--ilvDEAwgah~~F~p~~~~~sam~-~ga~~~~~i~vtQStHKtL~al-TQaS~LHvkg~vd~~~~n~a~~m-- 395 (714)
T PRK15400 322 LDVKS--IHFDSAWVPYTNFSPIYEGKCGMS-GGRVEGKVIYETQSTHKLLAAF-SQASMIHVKGDVNEETFNEAYMM-- 395 (714)
T ss_pred hCCCC--EEEEccchhhhccCcccCCcChhh-cCCCCCCceEEEEchhhcccch-hHHhHHHHcCCCCHHHHHHHHHH--
Confidence 98887 68999987542211111 121 1211 13 55555 765540 0111111 12 223333332
Q ss_pred CcccccccCCCCCCHHHHHHHHHHHHHHh---hcCHHHHHHHHHHHHHHHHHchhc-CCC--eeeEe-------------
Q psy14484 298 NINIFLHSHSYSGNPLACCAALATLEIFN---KDNILQRISQDMKKITKALTSLIT-HPK--IINFR------------- 358 (430)
Q Consensus 298 ~~~~~~~~~t~~~~~~~~~aa~~~l~~~~---~~~~~~~~~~~~~~l~~~l~~l~~-~~~--~~~~~------------- 358 (430)
+.+| +++-+-++..-.+-.+++ ...+.+...+.+..+++.|.++.. ... +....
T Consensus 396 ------~~ST-SPsY~l~ASLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~ 468 (714)
T PRK15400 396 ------HTTT-SPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLR 468 (714)
T ss_pred ------HcCC-CcHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccC
Confidence 3333 333333332223333443 245677788888889998877632 000 00000
Q ss_pred ------e-----------cceEEEEEEeecCCcc----chh-HHHHHHHHHHHCCcEEeecC-CEEEEeCCCCCCHHHHH
Q psy14484 359 ------Q-----------KGMIWAFDVIIEDPEQ----IET-FSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQ 415 (430)
Q Consensus 359 ------~-----------~g~~~~~~~~~~~~~~----~~~-~a~~~~~~l~~~Gv~~~~~~-~~lR~~~~~~~t~e~i~ 415 (430)
+ ..+=+.+..+ .-... ... -+..+.+.|.++||.+..++ ..+-|.++...|+++++
T Consensus 469 p~~~whgf~~~~~~~~~lDP~Klti~tp-gi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d~~~iLfl~s~g~t~~~~~ 547 (714)
T PRK15400 469 SDSTWHGFKNIDNEHMYLDPIKVTLLTP-GMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKAL 547 (714)
T ss_pred ccccccCcccccccccccCCceEEEEeC-CCCCCccccccCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHH
Confidence 0 0000111111 10000 000 14568888999999998765 67788889999999999
Q ss_pred HHHHHHHHH
Q psy14484 416 HMTSAIFQT 424 (430)
Q Consensus 416 ~~~~~l~~~ 424 (430)
.++++|.+.
T Consensus 548 ~L~~aL~~f 556 (714)
T PRK15400 548 SLLRALTDF 556 (714)
T ss_pred HHHHHHHHH
Confidence 999999865
No 373
>KOG1383|consensus
Probab=98.98 E-value=2e-07 Score=87.39 Aligned_cols=349 Identities=13% Similarity=0.163 Sum_probs=191.7
Q ss_pred CCCCEEEecccccccccCCCCCHHHHHHHHHHHhhcccc--ccCCCCCHHHHHHHHHHHhhcCCCCCeE-EEcCCchHHH
Q psy14484 31 VSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHV--MLSNLTHKPVIKLSEKLSSLTQYKLGHC-FYGSDGASAV 107 (430)
Q Consensus 31 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~~v-~~~~sgteA~ 107 (430)
.||+--+..+|+ +...+ +|+..+-+.+.+.+++.. .-+........+....++.++....+.+ .-|.|||||.
T Consensus 76 ld~~~~~~~vS~--~v~~~--~~~~~~l~~~~~~k~N~l~~d~fp~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~ 151 (491)
T KOG1383|consen 76 LDGNPRLGLASG--VVYWG--EPELDKLIMEAYNKFNPLHPDEFPVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSESG 151 (491)
T ss_pred cCCCcccCeeeE--EEecC--CcchhhHHHHHHhhcCccCccccchhHHHHHHHHHHHHHHhcCCccccCccccccchHH
Confidence 355533333444 44454 566666666666654322 2223334566677788888887554433 5678999998
Q ss_pred HHHHHHHHHhhhh-cCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC-CCCCCCCCCChhHHHH
Q psy14484 108 EVALKMSFHYWYN-KGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP-DSRNINKGNSANEIAR 185 (430)
Q Consensus 108 ~~al~~~~~~~~~-~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 185 (430)
..+.+.-+..+.. +|. .++.+++. ..-| ..+.+....+..+...+++. .+++.
T Consensus 152 l~~~k~~~~~r~~~k~I-~~p~iv~~-~~v~------------~a~eK~a~yf~v~l~~V~~~~~~~~~----------- 206 (491)
T KOG1383|consen 152 LAAKKSYRNRRKAQKGI-DKPNIVTP-QNVH------------AAFEKAARYFEVELREVPLDEGDYRV----------- 206 (491)
T ss_pred HHHHHHHHHHHHhccCC-CCccccch-HHHH------------HHHHHHHhhEEEEEEeeeccccceEe-----------
Confidence 8887766654433 232 22333331 1111 11222111222334556655 33444
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHh-cCCEEEEeccccCCCCc-ccccccccCCCC
Q psy14484 186 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNN-YNIHLIADEIAVGCGRT-GKFFACEHAEIW 263 (430)
Q Consensus 186 ~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~-~gi~li~DEv~~g~g~~-g~~~~~~~~~~~ 263 (430)
|+..+.+.++ +++.+++++- .+.+.|.+-+ +++|.++.-+ +++++++|.+-.||--. +. .....+++.
T Consensus 207 -D~~k~~~~i~---eNti~lv~~~-~~~p~G~~e~----ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~-~~~~~fdFr 276 (491)
T KOG1383|consen 207 -DPGKVVRMID---ENTIMLVGSL-PNFPTGEIED----VEKLADLLLEIWDIPIHVDACLGGFINPAGY-LNEEEFDFR 276 (491)
T ss_pred -cHHHHHHHhc---cceEEEEEEc-CCCCccchhh----HHHHHHHHHHHhCCceeecccCccccccccc-cCccccccC
Confidence 8888888885 6899999998 8888897766 9999999999 99999999998888432 21 111223321
Q ss_pred -Cceeee---e-c-ccCCCccccEEEEEc-HHH-HHhhhcc-CCcccccccCCCCCCHH--HHHHHHHHHHHHhhcCH--
Q psy14484 264 -PDFLCL---S-K-GITGGYLPLSLVMTT-DKI-YNSIYYK-NNINIFLHSHSYSGNPL--ACCAALATLEIFNKDNI-- 330 (430)
Q Consensus 264 -~d~~~~---s-K-~l~gG~~~ig~~~~~-~~~-~~~~~~~-~~~~~~~~~~t~~~~~~--~~~aa~~~l~~~~~~~~-- 330 (430)
|-+.+. + | ++.- ..+|+++-+ +++ .+++... ...+...-+.|..++-. -.++.+++|--+..+++
T Consensus 277 ~p~V~Sisa~~HKYGl~~--~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~ 354 (491)
T KOG1383|consen 277 VPGVTSISADGHKYGLAP--AGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRE 354 (491)
T ss_pred CCCceeEeeccceeeeee--cCcEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHH
Confidence 222222 2 3 2332 236677665 333 2222211 12223333444444322 12344455433334444
Q ss_pred -HHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec--CCEEEEeCCC
Q psy14484 331 -LQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI--GNTVYLMPPY 407 (430)
Q Consensus 331 -~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~--~~~lR~~~~~ 407 (430)
.+++.+....+++++++..+...+ +... +++... +...-. --++.+.|.+.|..+... +..+-+++..
T Consensus 355 ~~~~ive~~~~l~egie~i~~i~i~----gkp~-vs~~~~-~s~~~~---i~elsd~l~~~GW~lnalq~P~a~Hi~vt~ 425 (491)
T KOG1383|consen 355 NTQNIVETARKLREGIENIKGIKIV----GKPL-VSFILF-GSNDVN---IFELSDLLRKKGWILNALQFPAAIHICVTR 425 (491)
T ss_pred HHHHHHHHHHHHHHhhhccccceec----CCCc-EEEEEc-cCCccc---hhhhhHHHHhcCcCccccCCCCceEEEEEe
Confidence 456677888889999876443332 2222 233333 221111 146888899999877532 3334444444
Q ss_pred CCCHHH-HHHHHHHHHHHHHHhh
Q psy14484 408 ILNKNE-IQHMTSAIFQTFNEVI 429 (430)
Q Consensus 408 ~~t~e~-i~~~~~~l~~~l~~~~ 429 (430)
.+..++ .++++..|++++.++.
T Consensus 426 ~~~~~~~A~~~v~Di~~~~~el~ 448 (491)
T KOG1383|consen 426 VHAREDVADRFVADIRKVVEELK 448 (491)
T ss_pred eeccHHHHHHHHHHHHHHHHHHH
Confidence 444444 6889999999988764
No 374
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.74 E-value=1.3e-06 Score=81.57 Aligned_cols=230 Identities=13% Similarity=0.134 Sum_probs=131.6
Q ss_pred cccCCCC--CHHHHHHHHHHHhhcccc---ccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhh
Q psy14484 45 VNLFGHS--NSYINKALKNQLNKLEHV---MLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWY 119 (430)
Q Consensus 45 ~~~lG~~--~p~v~~a~~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~ 119 (430)
-.++|-+ +|++.+++.+.+...-.. -..+....-...+++.++... ..+.++++|.-+.|+.+++-....
T Consensus 31 ~t~lG~s~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~~~--~aea~~ivnnn~aAVll~~~al~~--- 105 (395)
T COG1921 31 MTNLGRSLYSPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCGLT--GAEAAAIVNNNAAAVLLTLNALAE--- 105 (395)
T ss_pred eccCCCccCCHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHhccc--chhheeeECCcHHHHHHHHhhhcc---
Confidence 3455543 789999988877653211 001111122224445555444 557889999999999887766553
Q ss_pred hcCCCCCcEEEEEcC---CCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHH
Q psy14484 120 NKGFLNKKKFICLQN---SYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLK 196 (430)
Q Consensus 120 ~~g~~~~~~vl~~~~---~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~ 196 (430)
++..|+..-+ ++|......+...+.. .+.+-+..+. ...+++.+|.
T Consensus 106 -----~~EvVis~g~lV~gg~~~v~d~~~~aG~~--------------l~EvG~tn~t------------~~~d~~~AIn 154 (395)
T COG1921 106 -----GKEVVVSRGELVEGGAFRVPDIIRLAGAK--------------LVEVGTTNRT------------HLKDYELAIN 154 (395)
T ss_pred -----CCeEEEEccccccCCCCChhHHHHHcCCE--------------EEEecccCcC------------CHHHHHHHhc
Confidence 4455553322 3444444444443321 2222221121 6778888997
Q ss_pred hCCCCeEEEE--EccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeee--cc
Q psy14484 197 KNHNKIAAII--IEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KG 272 (430)
Q Consensus 197 ~~~~~~~~vi--~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s--K~ 272 (430)
+ ++++.+ .++ ..+-.+ ..+ ++++.++|+++|+++|+|..-...-+ ..+-........+|+++|| |.
T Consensus 155 e---~ta~llkV~s~-~~~f~~-~l~----~~~l~~ia~~~~lpvivD~aSg~~v~-~e~~l~~~la~GaDLV~~SgdKl 224 (395)
T COG1921 155 E---NTALLLKVHSS-NYGFTG-MLS----EEELVEIAHEKGLPVIVDLASGALVD-KEPDLREALALGADLVSFSGDKL 224 (395)
T ss_pred c---CCeeEEEEeec-cccccc-ccc----HHHHHHHHHHcCCCEEEecCCccccc-cccchhHHHhcCCCEEEEecchh
Confidence 4 333322 222 222233 333 78899999999999999986421111 1111122334568999999 77
Q ss_pred cCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhc
Q psy14484 273 ITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD 328 (430)
Q Consensus 273 l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~ 328 (430)
|+| ..-|.+++++++++.+...+ ..-.+-.....+++..++|+.+..+
T Consensus 225 lgG--PqaGii~GkKelI~~lq~~~------l~Ralrv~K~tla~l~~aLe~y~~~ 272 (395)
T COG1921 225 LGG--PQAGIIVGKKELIEKLQSHP------LKRALRVDKETLAALEAALELYLQP 272 (395)
T ss_pred cCC--CccceEechHHHHHHHHhhh------hhhhhhcCcHhHHHHHHHHHHHcCc
Confidence 776 46889999999998887621 1122233455666677778766553
No 375
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.71 E-value=2.7e-06 Score=78.02 Aligned_cols=204 Identities=13% Similarity=0.144 Sum_probs=113.3
Q ss_pred CHHHHHHHHHH-HhhccccccC--CCCCHHHHHHHHHHHhhcCCCCCeEEEc---CCchHHHHHHHHHHHHhhhhcCCCC
Q psy14484 52 NSYINKALKNQ-LNKLEHVMLS--NLTHKPVIKLSEKLSSLTQYKLGHCFYG---SDGASAVEVALKMSFHYWYNKGFLN 125 (430)
Q Consensus 52 ~p~v~~a~~~~-~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~~v~~~---~sgteA~~~al~~~~~~~~~~g~~~ 125 (430)
..+|.+|+++. +......... ++.+.-++.|.+..++.+ +.|..++= -|||.|+..++...++ +
T Consensus 26 q~KVL~Af~~~~vs~~hf~~tTGYGY~D~GRd~le~iyA~vf--gaE~ALVRpq~vSGTHAi~~~Lfg~Lr--------p 95 (403)
T PF06838_consen 26 QLKVLKAFQENRVSDSHFAGTTGYGYDDIGRDKLERIYADVF--GAEDALVRPQFVSGTHAIALALFGVLR--------P 95 (403)
T ss_dssp HHHHHHHHHHTT--GGGCS---TT-TT-HHHHHHHHHHHHHC--T-SEEEEETTS-SHHHHHHHHHHHH----------T
T ss_pred HHHHHHHHHHcCCChhhcCCCCcCCCCCccHHHHHHHHHHHh--CchhhhhcccccchHHHHHHHHHhcCC--------C
Confidence 45677777652 2221111122 344567788888999999 55655554 3999999999998887 6
Q ss_pred CcEEEEEcCCCCCcchhh----hccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCC
Q psy14484 126 KKKFICLQNSYHGETLGA----LAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNK 201 (430)
Q Consensus 126 ~~~vl~~~~~yhg~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~ 201 (430)
.+..+... |..+.+ ..+.+. -...+..+......++..++... |++.++++++ ++
T Consensus 96 GD~ll~~t----G~PYDTL~~VIG~~g~--~~GSL~e~Gi~Y~~v~L~~dg~~------------D~~~i~~~~~---~~ 154 (403)
T PF06838_consen 96 GDELLSIT----GKPYDTLEEVIGIRGN--GPGSLKEFGIKYREVPLTEDGTI------------DWEAIKKALK---PN 154 (403)
T ss_dssp T-EEEESS----SS--CCHHHHHTSSSS--SSSSTGGGT-EEEE--B-TTSSB-------------HHHHHHHHH---TT
T ss_pred CCeEEEcC----CCchhhHHHHhCCCCC--CCCChHHhCceeEEEeecCCCCc------------CHHHHHHhhc---cC
Confidence 67777655 332222 222221 01112222233344554443333 8999999997 57
Q ss_pred eEEEEEccccccCCCc---ccCChHHHHHHHHHHHh--cCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccC
Q psy14484 202 IAAIIIEPLVQCAGGM---IMYDSIYLKLVREICNN--YNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGIT 274 (430)
Q Consensus 202 ~~~vi~ep~v~~~~G~---~~~~~~~l~~l~~l~~~--~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~ 274 (430)
+++|.+.- +.|- ...+.+.++++.++.|+ -++++.||.+|..|.-+- +...+..|++ ++=|..|
T Consensus 155 tk~v~IQR----SrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~-----EP~~vGADl~aGSLIKNpG 225 (403)
T PF06838_consen 155 TKMVLIQR----SRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQ-----EPTEVGADLMAGSLIKNPG 225 (403)
T ss_dssp EEEEEEE-----S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS------GGGGT-SEEEEETTSGGG
T ss_pred ceEEEEec----CCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceecccc-----CccccchhheeccceeCCC
Confidence 88888654 2221 23344566677777776 578999999998874332 2234567887 4669999
Q ss_pred CCccccE-EEEEcHHHHHhhhc
Q psy14484 275 GGYLPLS-LVMTTDKIYNSIYY 295 (430)
Q Consensus 275 gG~~~ig-~~~~~~~~~~~~~~ 295 (430)
||..|.| ++++++++++....
T Consensus 226 GgiAptGGYIaGr~~lVe~~a~ 247 (403)
T PF06838_consen 226 GGIAPTGGYIAGRKDLVERAAY 247 (403)
T ss_dssp TTT-SS-EEEEESHHHHHHHHH
T ss_pred CCccCcCCEEechHHHHHHHHh
Confidence 9877755 78899999887553
No 376
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.68 E-value=3.4e-06 Score=80.66 Aligned_cols=287 Identities=13% Similarity=0.144 Sum_probs=134.9
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhh
Q psy14484 77 KPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIY 156 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~ 156 (430)
...-++...++++++.+....-+..+++.+-++++.+.+... . .+++|++ +.+-|+.+...+....
T Consensus 110 q~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~-~----~~~~vlv-~~~~hP~~~~v~~t~a-------- 175 (429)
T PF02347_consen 110 QALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATK-R----KRNKVLV-PESLHPQTRAVLRTYA-------- 175 (429)
T ss_dssp HHHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHT-T-------EEEE-ETTS-CHHHHHHHHHC--------
T ss_pred HHHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcc-c----CCcEEEE-cCCcChhhHHHHHHhh--------
Confidence 555688899999994443345677788888886655444321 1 1235555 4556665544332111
Q ss_pred hccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcC
Q psy14484 157 TSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYN 236 (430)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g 236 (430)
.+...+++.++....... | .+++++|+++. ++.. |.+-. +++|.++++++|
T Consensus 176 ~~~g~~iv~~~~~~~~~~------------d-----------~~~~a~v~vq~-Pn~~-G~~ed----~~~i~~~~h~~g 226 (429)
T PF02347_consen 176 APLGIEIVEVPLDEDGTT------------D-----------DDDTAAVMVQN-PNTF-GVFED----IKEIADIAHAAG 226 (429)
T ss_dssp CHCCEEEEEE-BBTTCSB------------------------STTEEEEEEES-S-TT-SB--T----HHHHHHHHHHTT
T ss_pred hhCCeEEEEecccccCCc------------c-----------ccCeEEEEeec-CCCC-ceEee----HHHHHHHHHHcC
Confidence 122233344433221111 2 36899988876 5544 43433 999999999999
Q ss_pred CEEEEeccccCCCCcccccccccC-CCCCceee-eecc----cCCCccccEEEEEcHHHHHhhhcc--------CCcccc
Q psy14484 237 IHLIADEIAVGCGRTGKFFACEHA-EIWPDFLC-LSKG----ITGGYLPLSLVMTTDKIYNSIYYK--------NNINIF 302 (430)
Q Consensus 237 i~li~DEv~~g~g~~g~~~~~~~~-~~~~d~~~-~sK~----l~gG~~~ig~~~~~~~~~~~~~~~--------~~~~~~ 302 (430)
+++++ -+ ..--.+ .+... .+..||++ .+|. +++|+--.|++.+++++...+-.. ...+.+
T Consensus 227 al~~~-~a--d~~aL~---~l~~Pge~GADI~vg~~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~ 300 (429)
T PF02347_consen 227 ALVIV-GA--DPNALG---GLKSPGEYGADIVVGEHQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAF 300 (429)
T ss_dssp -EEEE-CG--GCCGCC---TC--GGGGT-SEEEECCTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCE
T ss_pred CEEEE-ec--CHHHHh---CcCChhhcCccEEeeCCCCCcccCCCCCCCeeeEEEhhhhhhhCCCceeccccccccccee
Confidence 99887 22 110000 01111 12357774 2354 444544588888898876554321 000111
Q ss_pred --------------cccCCCCCCHHHHH-HHHHHHHHHhhcC---HHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEE
Q psy14484 303 --------------LHSHSYSGNPLACC-AALATLEIFNKDN---ILQRISQDMKKITKALTSLITHPKIINFRQKGMIW 364 (430)
Q Consensus 303 --------------~~~~t~~~~~~~~~-aa~~~l~~~~~~~---~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~ 364 (430)
.-.+.++.|..-++ ++...+..+..++ ..+++..++.++.++|+++...+. ...-.+-
T Consensus 301 ~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~----~~~~f~e 376 (429)
T PF02347_consen 301 VLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPF----DNPFFFE 376 (429)
T ss_dssp EEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECS----SSSSBSS
T ss_pred eeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCccc----CCCCcee
Confidence 01123333433332 3333444444433 456778889999999987511111 1111111
Q ss_pred EEEEeecCCccchhHHHHHHHHHHHCCcEEee-cCCEEEEeCCCCCCHHHHHHHHHHH
Q psy14484 365 AFDVIIEDPEQIETFSKKFFVAALKNELLLRP-IGNTVYLMPPYILNKNEIQHMTSAI 421 (430)
Q Consensus 365 ~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~-~~~~lR~~~~~~~t~e~i~~~~~~l 421 (430)
.+... . .. . ...++.+++...|+.... ..+.+-+++.-.+|++|||.+++.|
T Consensus 377 ~v~~~-~-~~--~-~~~~l~~~~~~~gl~~~~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 377 FVVVF-S-KD--K-EVEELLKRGIEGGLNLRYPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp EEEEE-S-S---H-HHHHHHHTT----EEEGGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred eeeec-C-Cc--H-HHHHHHHHHHhcCCCccccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 12122 1 11 1 123466666666754432 2368899999999999999999875
No 377
>KOG3846|consensus
Probab=98.64 E-value=2.4e-05 Score=69.63 Aligned_cols=344 Identities=13% Similarity=0.122 Sum_probs=187.6
Q ss_pred ccCCCCCHHHHHHHHHHHhhcccc---ccCCCCC---HHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhh
Q psy14484 46 NLFGHSNSYINKALKNQLNKLEHV---MLSNLTH---KPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWY 119 (430)
Q Consensus 46 ~~lG~~~p~v~~a~~~~~~~~~~~---~~~~~~~---~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~ 119 (430)
++||.-+....+.+.+.+++.... +...+.. ..-+.+...++...++.-++|.+.||-|--+...+-.....+
T Consensus 74 NSLGLmPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~iVGA~e~EvavmNsLTvNlh~Ll~sFyKPT- 152 (465)
T KOG3846|consen 74 NSLGLMPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPIVGAQENEVAVMNSLTVNLHSLLISFYKPT- 152 (465)
T ss_pred cccccCchhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhhccCCchhhhhHhhhhhHHHHHHHHhcCCc-
Confidence 579988888888888877764322 1111110 011223345666677677788888887655554444443322
Q ss_pred hcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeC-CCCCCCCCCCCChhHHHHHHHHHHHHHHHhC
Q psy14484 120 NKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIIT-TPDSRNINKGNSANEIARCAIFDLEILLKKN 198 (430)
Q Consensus 120 ~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~ 198 (430)
+.|-+|+.-..+|....++.-+-..-.+ ...+..++- -|. +..+.. ..+++-+.|.++
T Consensus 153 ----ekR~KILlE~kaFPSDhYAiesQ~~lhG-------~~~e~sm~~iePR-------EGEetl---RteDILd~IEkn 211 (465)
T KOG3846|consen 153 ----EKRFKILLEKKAFPSDHYAIESQCKLHG-------ISPENSMIQIEPR-------EGEETL---RTEDILDTIEKN 211 (465)
T ss_pred ----chhhhhhhccCCCCchHHHHHhhhhhcC-------CChHHheEEeccc-------ccccch---hHHHHHHHHHhc
Confidence 2456788777777654332222111000 001111111 111 111111 445666677777
Q ss_pred CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceee--eecccCCC
Q psy14484 199 HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGG 276 (430)
Q Consensus 199 ~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~--~sK~l~gG 276 (430)
.+.++.|.++. |+--+|.... +.+|-..-+..|+++=.|=+++ +|... .....|| .|+.+ --|.+..|
T Consensus 212 gDeiA~v~fSG-vqyYTGQ~Fd----i~aIT~Agq~kgc~VGfDLAHA-vgNVp--L~LHdWg--VDFACWCSYKYlnaG 281 (465)
T KOG3846|consen 212 GDEIALVCFSG-VQYYTGQYFD----IGAITFAGQFKGCLVGFDLAHA-VGNVP--LQLHDWG--VDFACWCSYKYLNAG 281 (465)
T ss_pred CCeEEEEEeec-ceeecccccc----hhhhhhcccCCCcEechhhhhh-hcCCc--eEEeecC--CceEEEeeecccccC
Confidence 78899999999 9999997777 7788877777899999998876 54331 2223344 46665 33765544
Q ss_pred ccccEEEEEcHHHHHhhhcc-------CCcccccc-----------cCCCCCCHH-HHHHHHHHHHHHhh---cCHHHHH
Q psy14484 277 YLPLSLVMTTDKIYNSIYYK-------NNINIFLH-----------SHSYSGNPL-ACCAALATLEIFNK---DNILQRI 334 (430)
Q Consensus 277 ~~~ig~~~~~~~~~~~~~~~-------~~~~~~~~-----------~~t~~~~~~-~~~aa~~~l~~~~~---~~~~~~~ 334 (430)
.-.||.++..++......+. ..+..+.. +...+..|+ -.++.+..|++... ++++.+.
T Consensus 282 aGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS 361 (465)
T KOG3846|consen 282 AGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRS 361 (465)
T ss_pred CCccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhh
Confidence 33588888876543221110 00001110 111122222 23334455665543 2333333
Q ss_pred HHHHHHHHHHHHchh--cCCC------e-----eeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-CCE
Q psy14484 335 SQDMKKITKALTSLI--THPK------I-----INFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-GNT 400 (430)
Q Consensus 335 ~~~~~~l~~~l~~l~--~~~~------~-----~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-~~~ 400 (430)
--+..++...++... .++. + ....-+|.-+.+.+. ++ ...+.+.|.++|+++... ++.
T Consensus 362 ~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fs-sp-------~~~vfqeL~krGv~~DkR~PNv 433 (465)
T KOG3846|consen 362 LLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFS-SP-------TPKVFQELHKRGVIGDKRRPNV 433 (465)
T ss_pred hhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeC-CC-------chHHHHHHHHcCeeccccCCCc
Confidence 223333333333321 1111 0 112334444444443 21 146899999999998754 689
Q ss_pred EEEeC-CCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 401 VYLMP-PYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 401 lR~~~-~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
||+.| +++++-.++..++..|.++++.+.
T Consensus 434 IRvAPvpLYN~f~Dvy~f~n~L~e~~d~~e 463 (465)
T KOG3846|consen 434 IRVAPVPLYNTFSDVYIFVNALNEAMDKLE 463 (465)
T ss_pred eEeecchhhccHHHHHHHHHHHHHHHHHhh
Confidence 99886 567899999999999999988764
No 378
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.62 E-value=4.6e-05 Score=79.90 Aligned_cols=286 Identities=13% Similarity=0.069 Sum_probs=159.1
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhh
Q psy14484 77 KPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIY 156 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~ 156 (430)
+..-+++..++++++.+..+..+..++|.+-++++.+.+.. ++ ++++|++. .+-|..+...+.. ..
T Consensus 109 e~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~---~~--~~~~vlv~-~~~hP~~~~v~~t--------~a 174 (939)
T TIGR00461 109 EALLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVS---KK--KANKFFVA-KDLHPQTKSVLHT--------RA 174 (939)
T ss_pred HHHHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhh---cC--CCCEEEEC-CCCCcchHHHHHH--------HH
Confidence 55568888999999767667888899998888655543321 11 24566654 4445443322210 11
Q ss_pred hccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcC
Q psy14484 157 TSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYN 236 (430)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g 236 (430)
.....+++.+ |+++|+..+ +++++++.. + +..|.+-. +++|.++++++|
T Consensus 175 ~~~g~~v~~~--------------------~~~~l~~~~-----~~~~v~~q~-P-n~~G~ied----~~~i~~~~h~~g 223 (939)
T TIGR00461 175 KPFGIEVIVV--------------------DCSDIKKAV-----DVFGCLLQY-P-ATDGSILD----YKQLIDALHSHK 223 (939)
T ss_pred HhcCcEEEEE--------------------cHHHHhhcC-----CEEEEEEEC-C-CCCeEEec----HHHHHHHHHHcC
Confidence 1222233332 344555444 366666643 3 45565654 899999999999
Q ss_pred CEEEEeccccCCCCcccccccccCCCCCceee-----eecccCCCccccEEEEEcHHHHHhhhcc--C----C--ccccc
Q psy14484 237 IHLIADEIAVGCGRTGKFFACEHAEIWPDFLC-----LSKGITGGYLPLSLVMTTDKIYNSIYYK--N----N--INIFL 303 (430)
Q Consensus 237 i~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~-----~sK~l~gG~~~ig~~~~~~~~~~~~~~~--~----~--~~~~~ 303 (430)
++++++.-...++..-.+ . ++..|+++ |+=.+++|+--.|++.+++++...+-.. + . .+.+.
T Consensus 224 al~~~~ad~~al~ll~~P---g--e~GaDi~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~ 298 (939)
T TIGR00461 224 SLVSVAADLMALTLLTPP---G--HYGADIVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALR 298 (939)
T ss_pred CEEEEEechHHhCCcCCH---H--HcCCcEEeeCCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccce
Confidence 999997543322111111 1 22357763 2334454533377788888776554321 0 0 00010
Q ss_pred c------------cCCCCCC-HHHHHHHHHH--HHHHhhcC---HHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEE
Q psy14484 304 H------------SHSYSGN-PLACCAALAT--LEIFNKDN---ILQRISQDMKKITKALTSLITHPKIINFRQKGMIWA 365 (430)
Q Consensus 304 ~------------~~t~~~~-~~~~~aa~~~--l~~~~~~~---~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~ 365 (430)
. ..|.+.. .-++.+..++ +..+..++ +.+++..++.++.++|++. ++..+.. ..|-.
T Consensus 299 l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~-G~~~~~~----~fF~~ 373 (939)
T TIGR00461 299 LALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEND-PHELINK----TWFDT 373 (939)
T ss_pred eecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCC----Cccce
Confidence 0 1121111 1122222222 33333333 3456677778888888764 2222111 22323
Q ss_pred EEEeecCCccchhHHHHHHHHHHHCCcEEeec-CCEEEEeCCCCCCHHHHHHHHHHHH
Q psy14484 366 FDVIIEDPEQIETFSKKFFVAALKNELLLRPI-GNTVYLMPPYILNKNEIQHMTSAIF 422 (430)
Q Consensus 366 ~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-~~~lR~~~~~~~t~e~i~~~~~~l~ 422 (430)
+.+. -+. .. +.++.+.+.++||.+... ++.+++++.-.+|++||+.+++.|.
T Consensus 374 ~~v~-~~~--~~--~~~i~~~~~~~gi~l~~~~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 374 LTVK-VGN--GI--SSELLKAAEEFNINLRAVDTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred EEEE-eCC--CC--HHHHHHHHHHCCCeeeecCCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 3333 210 01 467999999999998765 4689999999999999999999984
No 379
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.61 E-value=1.5e-07 Score=87.09 Aligned_cols=231 Identities=15% Similarity=0.150 Sum_probs=52.3
Q ss_pred ccCCCC--CHHHHHHHHHHHhhcccc---ccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhh
Q psy14484 46 NLFGHS--NSYINKALKNQLNKLEHV---MLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYN 120 (430)
Q Consensus 46 ~~lG~~--~p~v~~a~~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~ 120 (430)
.+||-+ +|++.+++.+.+..+... ...+..-.-+..+.+.++.++ +.+..+++|+.+.|+.+++.....
T Consensus 11 TnLGRs~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~lt--gAeaA~VvNnnaAAv~L~l~~la~---- 84 (367)
T PF03841_consen 11 TNLGRSPLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCELT--GAEAALVVNNNAAAVLLALNTLAK---- 84 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccccc----
Confidence 355543 477888877765543211 000011111234556667776 667888899999999988876653
Q ss_pred cCCCCCcEEEEEcC--CCCCc--chhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHH
Q psy14484 121 KGFLNKKKFICLQN--SYHGE--TLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLK 196 (430)
Q Consensus 121 ~g~~~~~~vl~~~~--~yhg~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~ 196 (430)
++..||..-. -+-|. ....+..++ ...+.+-... ...+++.+++|.
T Consensus 85 ----~~EvIvsRGelVeiGgsFRip~vm~~sG--------------a~lvEVGttN------------~t~~~Dye~AI~ 134 (367)
T PF03841_consen 85 ----GKEVIVSRGELVEIGGSFRIPDVMRQSG--------------ARLVEVGTTN------------RTHLSDYEKAIT 134 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----cccccccccccccccccccccccccccc--------------cccccccccc------------cccccccccccc
Confidence 4444432110 00111 111111111 1111111100 125778888886
Q ss_pred hCCCCeEEEE-EccccccCCC-cccCChHHHHHHHHHHHhcCCEEEEecccc------CCCCcccccccccCCCCCceee
Q psy14484 197 KNHNKIAAII-IEPLVQCAGG-MIMYDSIYLKLVREICNNYNIHLIADEIAV------GCGRTGKFFACEHAEIWPDFLC 268 (430)
Q Consensus 197 ~~~~~~~~vi-~ep~v~~~~G-~~~~~~~~l~~l~~l~~~~gi~li~DEv~~------g~g~~g~~~~~~~~~~~~d~~~ 268 (430)
+++++++ +.+..+...| .-.++ ++++.+++++|++++|+|-.-. .++..+.+...+.....+|+++
T Consensus 135 ---e~Ta~ll~Vh~Sn~~i~GFt~~~~---~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~ 208 (367)
T PF03841_consen 135 ---ENTAALLKVHTSNFRIQGFTGEVS---LEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVT 208 (367)
T ss_dssp --------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEE
T ss_pred ---cccccccccccccccccccccccc---HHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEE
Confidence 4566654 3320111111 11222 8999999999999999996531 1222222223333445689999
Q ss_pred ee--cccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh
Q psy14484 269 LS--KGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN 326 (430)
Q Consensus 269 ~s--K~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~ 326 (430)
|| |.++| ...|.+++++++++.++..+ ..-.+-.+-..+++..++|+.+.
T Consensus 209 fSGdKlLGG--PQaGiI~Gkk~lI~~lk~~p------l~RalrvdK~tla~L~atL~~Y~ 260 (367)
T PF03841_consen 209 FSGDKLLGG--PQAGIIVGKKELIEKLKKHP------LGRALRVDKLTLAALEATLRLYL 260 (367)
T ss_dssp EETTSSSSS---S-EEEEEEHHHHHHHHHHH------HTTT-B--HHHHHHHHHHHHH--
T ss_pred EECCCcCCC--CCeEEEEeCHHHHHHHhhCC------CcceEeeCHHHHHHHHHHHHHHH
Confidence 99 67776 35799999999999887611 22233445666777777777543
No 380
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.60 E-value=7.8e-05 Score=69.77 Aligned_cols=295 Identities=15% Similarity=0.144 Sum_probs=163.8
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhh
Q psy14484 77 KPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIY 156 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~ 156 (430)
+..-++...++++.+.+..+.-+.-.+|.+-++++.+-+... . +++++++ +..-|..+...+..- .
T Consensus 120 qaLfefQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r~~k---~--k~~~~~V-~~~vhpqt~~Vl~Tr--------a 185 (450)
T COG0403 120 EALFEFQTLVADLTGLDVANASMLDEATAAAEAMLMAKRVTK---K--KRNKFLV-PKDVHPQTLDVLRTR--------A 185 (450)
T ss_pred HHHHHHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHHhhc---C--cCceEEe-cCCCCHHHHHHHHhh--------c
Confidence 444567778888987777778888888888887665554421 0 2455554 555555554443321 1
Q ss_pred hccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcC
Q psy14484 157 TSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYN 236 (430)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g 236 (430)
.++..++...+.+ |+++++++ . .+.+++++++- ++.-|..... +++|.+.++++|
T Consensus 186 ~~~g~~i~~~~~~-----------------d~~~l~~~-~--~~~~~gv~vQy-P~~~G~~~~d----~~~l~~~~h~~~ 240 (450)
T COG0403 186 EGLGIEIEVVDAD-----------------DLDDLESA-D--DGDVFGVLVQY-PNTFGIVEED----LRALIEAAHSAG 240 (450)
T ss_pred ccCceEEEEeccc-----------------hhhhhhhc-c--ccCeEEEEEec-CCCCCccchh----HHHHHHHHhhcC
Confidence 1222233333332 77888877 4 35789999987 6655433332 899999999999
Q ss_pred CEEEEeccccCCCCcccccccccC-CCCCceee-----eecccCCCccccEEEEEcHHHHHhhhcc---------C----
Q psy14484 237 IHLIADEIAVGCGRTGKFFACEHA-EIWPDFLC-----LSKGITGGYLPLSLVMTTDKIYNSIYYK---------N---- 297 (430)
Q Consensus 237 i~li~DEv~~g~g~~g~~~~~~~~-~~~~d~~~-----~sK~l~gG~~~ig~~~~~~~~~~~~~~~---------~---- 297 (430)
+++++=.=--.++- .... .+..||++ |+=.|+-|+.-.|++.+++++...+-.. +
T Consensus 241 al~~v~aDplaL~L------L~pPGe~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~ 314 (450)
T COG0403 241 ALVIVAADPLALGL------LKPPGEFGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAF 314 (450)
T ss_pred CEEEEEechhHhhc------cCCccccCCceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchh
Confidence 98876421111111 1111 12457664 4444554433477778888775443210 0
Q ss_pred ---------CcccccccCCCCCCHHHHHHHHHHH--HHHhhc---CHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceE
Q psy14484 298 ---------NINIFLHSHSYSGNPLACCAALATL--EIFNKD---NILQRISQDMKKITKALTSLITHPKIINFRQKGMI 363 (430)
Q Consensus 298 ---------~~~~~~~~~t~~~~~~~~~aa~~~l--~~~~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~ 363 (430)
..|.-.-.+..+.+..-+ |..+++ -.+..+ ++..++.++..++.++|++.. . ++ .+.....|
T Consensus 315 rLaLQTREQHIRReKATSNICTnQaLl-A~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~-~-g~-~~~~~~fF 390 (450)
T COG0403 315 RLALQTREQHIRREKATSNICTNQALL-ALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIG-A-GV-ELVFDHFF 390 (450)
T ss_pred hhhHHHHHHHHhhhccchhhhHHHHHH-HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcC-C-ce-Eeccccce
Confidence 011111112222222222 222222 222222 345667778888888887541 0 11 12122334
Q ss_pred EEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 364 WAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 364 ~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
-.+.+. -+. +.+..+..+....|+.+..-. +.+-+++.-.+|+++|+.+++.|....
T Consensus 391 dt~~v~-~~~----~~~~~l~~~~~~~G~~L~~~~~~~~~ia~tEt~t~~~i~~l~~~~~~~~ 448 (450)
T COG0403 391 DTFTVR-VPE----EVAEALLAAAIAGGINLRRVDADTVLIALTETTTKEDIDALVAAFGGVN 448 (450)
T ss_pred eeEEEe-cch----hHHHHHHHHHHhcCCceeeecCCceEEEeecccCHHHHHHHHHHHhhhc
Confidence 333333 211 224677778888898887653 567788888899999999999887653
No 381
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.53 E-value=2.3e-05 Score=73.40 Aligned_cols=222 Identities=9% Similarity=0.070 Sum_probs=112.2
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccc---cCCCC
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACE---HAEIW 263 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~---~~~~~ 263 (430)
|++++|+++++.+....+.+++. ..+..+ +.| +-+++|.++|+++||+.++..+|+ .--.-..-..+ ..|..
T Consensus 140 d~~~ie~~i~~~G~~~iLcvltt-tscfap-r~~--D~i~~IakiC~~~~IPhlvNnAYg-vQ~~~~~~~i~~a~~~GRv 214 (389)
T PF05889_consen 140 DLEAIEAKIEELGADNILCVLTT-TSCFAP-RLP--DDIEEIAKICKEYDIPHLVNNAYG-VQSSKCMHLIQQAWRVGRV 214 (389)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEEE-SSTTTT-B------HHHHHHHHHHHT--EEEEGTTT-TT-HHHHHHHHHHHHHSTC
T ss_pred cHHHHHHHHHHhCCCCeEEEEEe-cCccCC-CCC--ccHHHHHHHHHHcCCceEEccchh-hhHHHHHHHHHHHHhcCCc
Confidence 78899999987655555555555 555544 333 459999999999999999999985 50000000000 11222
Q ss_pred -CceeeeecccCCCccccE--EEEE-cHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh---cCHHHHHHH
Q psy14484 264 -PDFLCLSKGITGGYLPLS--LVMT-TDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK---DNILQRISQ 336 (430)
Q Consensus 264 -~d~~~~sK~l~gG~~~ig--~~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~---~~~~~~~~~ 336 (430)
.++-++.|-+- .|+| .+.. .+..+..+.. .+.+--+..|. .-...+|..+.. ..+.....+
T Consensus 215 da~vqS~dkNF~---VPvGgai~As~~~~~i~~vs~-------~YpGRas~sp~--ld~~itLl~LG~~g~~~ll~~r~~ 282 (389)
T PF05889_consen 215 DAFVQSTDKNFM---VPVGGAIMASFDPSGILAVSK-------EYPGRASASPS--LDLFITLLSLGCTGYGALLKERKA 282 (389)
T ss_dssp SEEEEEHHHHHC---EESSHEEEEESSHHHHHHHHH-------TSHSHBTSHHH--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeeeecCCCEE---ecCCCcEEEecCHHHHHHHHH-------Hhhhhhhcccc--hHHHHHHHHHhhhHHHHHHHHHHH
Confidence 22335556543 1222 2333 3445555543 01111111121 112233333322 233344455
Q ss_pred HHHHHHHHHHch-hcCCC-eeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcE----Eeec------------C
Q psy14484 337 DMKKITKALTSL-ITHPK-IINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELL----LRPI------------G 398 (430)
Q Consensus 337 ~~~~l~~~l~~l-~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~----~~~~------------~ 398 (430)
.-.++.++|+++ +++.. +...+.....+++++. .-..........|...|..+||. +.+. .
T Consensus 283 ~f~~l~erl~~~aee~~e~ll~~p~N~is~a~tl~-~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~ 361 (389)
T PF05889_consen 283 SFPYLKERLKKWAEEVGERLLETPRNHISMAFTLD-TLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPC 361 (389)
T ss_dssp HHHHHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-T-TCCTCCSSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SS
T ss_pred HHHHHHHHHHHHHHHhhhhhcCCCCCCeeEEEECc-cchhhccchhhhHHHHHHhCCcccceeeccCCCcccccCCCCch
Confidence 666677777766 33332 2233444555666665 22111111135688888888653 2221 1
Q ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 399 NTVYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 399 ~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
.++-+...+..++||++.++++|+++++
T Consensus 362 ~Ylt~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 362 PYLTAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp SEEEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 4666766888999999999999999874
No 382
>KOG0628|consensus
Probab=98.40 E-value=0.00023 Score=67.21 Aligned_cols=229 Identities=16% Similarity=0.184 Sum_probs=116.8
Q ss_pred HHHHHHHHHHhC--CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCC-
Q psy14484 187 AIFDLEILLKKN--HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIW- 263 (430)
Q Consensus 187 d~~~le~~l~~~--~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~- 263 (430)
+-+.|+++|.+- .+-+..+++-. +.+++. .. -+.+.+|..+|+++|++|++|.+|+|-...-+.+-.-.-|++
T Consensus 218 r~~~L~~AIe~D~arGlIPf~v~at-~GTT~~-ca--~D~l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~ 293 (511)
T KOG0628|consen 218 RGDTLRKAIEEDIARGLIPFFVCAT-LGTTSS-CA--FDELEELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEY 293 (511)
T ss_pred CHHHHHHHHHHHHhCCCccEEEEEe-ecCccc-cc--cccHHHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchh
Confidence 446666666542 24455566655 433332 22 245999999999999999999999864222111100001221
Q ss_pred Ccee--eeeccc-----------CCCccccEEEE-EcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcC
Q psy14484 264 PDFL--CLSKGI-----------TGGYLPLSLVM-TTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDN 329 (430)
Q Consensus 264 ~d~~--~~sK~l-----------~gG~~~ig~~~-~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~ 329 (430)
.|=. ..+|.+ -.| ..+.-.+ +.+-..+.-.. +....+.|..--.+--+.....+-+++.+..++
T Consensus 294 aDSfn~n~hK~~~vnfDCs~lWvkd~-~~~~~~~~vdp~yL~h~~~-~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~ 371 (511)
T KOG0628|consen 294 ADSFNFNPHKWLLVNFDCSPLWVKDG-TKLSRAFNVDPLYLKHAYQ-GSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVEN 371 (511)
T ss_pred hccccCChhheeEEeeeeecceeecC-ceeeeeeecChHhhcchhh-ccCCCccccccccccchhhHHHHHHHHHHhHHH
Confidence 1211 123322 123 2333222 22222211111 011122222111122233334445667776778
Q ss_pred HHHHHHHHHHHHHHHHHch-hcCCCee--eEeecceEEEEEEeecCCccchhHHHHHHHHHHHCC-cEEeec---C-CEE
Q psy14484 330 ILQRISQDMKKITKALTSL-ITHPKII--NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNE-LLLRPI---G-NTV 401 (430)
Q Consensus 330 ~~~~~~~~~~~l~~~l~~l-~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~G-v~~~~~---~-~~l 401 (430)
+.+++++.. +|.+.++.+ ...+.+. ..+..| +++|.++ ++ ...-+++.+++...| |...|+ + -.|
T Consensus 372 lq~~iR~h~-~La~~fe~lv~~d~~FE~~~~~~lg-LvcFRlk-~~----N~~ne~Ll~~in~~g~i~l~~~~l~gk~vl 444 (511)
T KOG0628|consen 372 LQNYIREHV-RLAKEFETLVRADPRFEIVNKRILG-LVCFRLK-GD----NEINEALLNRLNSSGRIHLVPASLHGKFVL 444 (511)
T ss_pred HHHHHHHHH-HHHHHHHHHhhcCCcceeecccccc-eeEEeec-CC----cHHHHHHHHHHHhcCcEEEEEeeecceEEE
Confidence 888887654 344555544 2222211 122333 3445555 42 222467888887665 555554 2 368
Q ss_pred EEeCCCCC-CHHHHHHHHHHHHHHHHHh
Q psy14484 402 YLMPPYIL-NKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 402 R~~~~~~~-t~e~i~~~~~~l~~~l~~~ 428 (430)
||.++... +++++++.-+.|.+..+++
T Consensus 445 Rf~V~s~~t~~~di~~a~~~I~~~a~~l 472 (511)
T KOG0628|consen 445 RFAVCSPLTNESDIDEAWKIIFEAADEL 472 (511)
T ss_pred EEEecCCCCcHHHHHHHHHHHHHHHHHH
Confidence 98887765 6788999999998887764
No 383
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.35 E-value=4.3e-05 Score=69.75 Aligned_cols=280 Identities=10% Similarity=0.081 Sum_probs=146.1
Q ss_pred HHHHHHHHHHHhhcC-C--CCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccch
Q psy14484 77 KPVIKLSEKLSSLTQ-Y--KLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFK 153 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~-~--~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~ 153 (430)
+..++..+.|.+..+ + +--.|+|.+|+|+-+++|+.++.... ....+.-+||...|.|..+...+--... ..|
T Consensus 46 ~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~--~~~~~p~~VVa~aPYY~~Y~~qt~~f~s-~~y- 121 (363)
T PF04864_consen 46 PELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNA--SPSSSPASVVAAAPYYSSYPEQTDFFDS-RLY- 121 (363)
T ss_dssp HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT---TTSSSEEEEE-SS--CHHHHHCCCT-B-TTE-
T ss_pred HHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCC--CCCCCCceeEecCCCccchHHHHHhccc-cCc-
Confidence 444444445555554 1 22379999999999999998775431 1222456899989988766433221111 001
Q ss_pred hhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHh-CCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 154 EIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKK-NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
.+.. |..... .. .+....-+++.| .|+.|. + -+ .++
T Consensus 122 ----------~w~G-------------------da~~~~---~~~~~~~~IElVTSP-NNPDG~-l------r~---~V~ 158 (363)
T PF04864_consen 122 ----------KWAG-------------------DASNFK---NSDNPSPYIELVTSP-NNPDGQ-L------RE---AVL 158 (363)
T ss_dssp ----------EEEE-------------------ECCCGT---T-S-CCGEEEEEESS--TTT----------------SS
T ss_pred ----------cccc-------------------cHHhhc---cCCCCCCeEEEEeCC-CCCccc-c------cc---hhc
Confidence 1111 111110 11 135677788887 443332 2 11 134
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCCccccEEEEEcH-HHHHhhhccCCcccccccCCCC
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPLSLVMTTD-KIYNSIYYKNNINIFLHSHSYS 309 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~~~ig~~~~~~-~~~~~~~~~~~~~~~~~~~t~~ 309 (430)
+.-+..+|.|=+|=---++. ... ...-|++ |+||.-|-.+.|+|+.+++. ++.+.+.. +...+|.+
T Consensus 159 ~g~~~k~I~D~AYYWPhyTp----I~~-~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~~------y~~lnTiG 227 (363)
T PF04864_consen 159 NGSSGKVIHDLAYYWPHYTP----ITA-PADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMTK------YMELNTIG 227 (363)
T ss_dssp TTTEEEEEEE-TT-STTTS-------S--B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHHH------HHHHHCSS
T ss_pred CCCCcceeeeeeeecccccc----cCC-CCCCceEEEEEecccCccccccceeeecCHHHHHHHHH------HHHHhccc
Confidence 55667789997763111111 111 1234655 67896654338999999875 55555554 55677888
Q ss_pred CCHHHHHHHHHHHHHHhh----c----CHH----HHHHHHHHHHHHHHHchhc-----C-CC----ee-eEeecceEEEE
Q psy14484 310 GNPLACCAALATLEIFNK----D----NIL----QRISQDMKKITKALTSLIT-----H-PK----II-NFRQKGMIWAF 366 (430)
Q Consensus 310 ~~~~~~~aa~~~l~~~~~----~----~~~----~~~~~~~~~l~~~l~~l~~-----~-~~----~~-~~~~~g~~~~~ 366 (430)
.+-=++..++..|+.+-+ + ++. +.++++.++|++.+..-.+ . |. .. ...+...|.++
T Consensus 228 vS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWl 307 (363)
T PF04864_consen 228 VSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWL 307 (363)
T ss_dssp --HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEE
T ss_pred CcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEE
Confidence 877777777777765422 1 243 3455566666666643211 1 11 01 23445678888
Q ss_pred EEeecCCccchhHHHHHHHHHHHCCcEEeec------CCEEEEeCCCCCCHHHHHHHHHHHHH
Q psy14484 367 DVIIEDPEQIETFSKKFFVAALKNELLLRPI------GNTVYLMPPYILNKNEIQHMTSAIFQ 423 (430)
Q Consensus 367 ~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~------~~~lR~~~~~~~t~e~i~~~~~~l~~ 423 (430)
.+. .... ......|++.||+.+.+ ...+|+ ++..++++.+.++++|..
T Consensus 308 kCe-~eed------~DC~~~l~~~~I~tr~G~~fga~~ryVRl--Sml~~~d~Fd~l~~rL~~ 361 (363)
T PF04864_consen 308 KCE-REED------EDCYAVLREAKIITRSGVLFGADSRYVRL--SMLKRDDDFDQLLERLSK 361 (363)
T ss_dssp EES-SCGG------SSHHHHHHCTTEEEEEGGGGTS-TTEEEE--ESSS-HHHHHHHHHHHHC
T ss_pred ecC-Cccc------ccHHHHHHhCCcccCCCCccCCCCCeEEE--eccCCHHHHHHHHHHHHh
Confidence 877 4211 23556677889988875 368888 677899999999999975
No 384
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=98.30 E-value=0.0002 Score=70.35 Aligned_cols=160 Identities=14% Similarity=0.181 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHhhcCCCCC-eEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCC-Cccchh
Q psy14484 77 KPVIKLSEKLSSLTQYKLG-HCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTN-IQSFKE 154 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~-~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~-~~~~~~ 154 (430)
....+..+..++.+ +.+ ..+++||-|.||..++.+++. ++++ |.++...|-+..-.+.+++ .|.|
T Consensus 70 G~i~eAqe~aA~~f--gAd~tyFvvNGTS~ank~vi~a~~~--------~GD~-VLvdRN~HKSi~~glilaGa~Pvy-- 136 (557)
T COG1982 70 GPIKEAQELAARVF--GADHTYFVVNGTSTANKAVINAVLT--------PGDK-VLVDRNCHKSIHHGLILAGATPVY-- 136 (557)
T ss_pred ccHHHHHHHHHHHh--CCCceEEEECCccHHHHHHHHhhcC--------CCCE-EEecCCccHHHHHHHHHcCCceEE--
Confidence 44557777778888 445 455667777777777777664 4444 5567888887655544444 2322
Q ss_pred hhhccCCCeeEeCCCCC-CCCCCCCChhHHHHHHHHHHHHHHHhCCCC-eEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 155 IYTSLLNKTYIITTPDS-RNINKGNSANEIARCAIFDLEILLKKNHNK-IAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 155 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~le~~l~~~~~~-~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
..+..+. +....+ -+.+.+++.+.+++.. ..+++..| +=.|.... +++|.+.+
T Consensus 137 ----------l~p~~np~~gi~gg--------I~~~~~~~~l~~~~~~~k~~vitnp---TYdGv~~n----~~~i~~~~ 191 (557)
T COG1982 137 ----------LEPSRNPLYGIIGG--------IPLETFKEALLAHPDAEKLAVITNP---TYDGVCYN----LRKIVELL 191 (557)
T ss_pred ----------ecCCCCccccccCC--------CCHHHHHHHHHhChhhheeEEEecC---ccceEeec----HHHHHHHH
Confidence 1111111 111111 1678888888877555 66777776 33465555 89999999
Q ss_pred HhcCCEEEEeccccCCCCccc-ccccccCCCCCceeeee--cccCC
Q psy14484 233 NNYNIHLIADEIAVGCGRTGK-FFACEHAEIWPDFLCLS--KGITG 275 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~-~~~~~~~~~~~d~~~~s--K~l~g 275 (430)
.+.++++.+||.+. ..+.-. .+.-....-..|+++-| |.+++
T Consensus 192 ~~~~a~v~~deah~-~~~~~~~~l~~~~~~~~~~~~tqS~HK~l~a 236 (557)
T COG1982 192 HHYGAWVLYDEAHP-AHFDFSPMLPESALNGGADFVTQSTHKLLAA 236 (557)
T ss_pred hhcCceEEhhhcCc-ccccccccCcchhhhcCceEEEechhhhhhh
Confidence 99999999999875 322211 11111222345777777 55544
No 385
>KOG1412|consensus
Probab=98.26 E-value=0.00011 Score=65.65 Aligned_cols=278 Identities=14% Similarity=0.120 Sum_probs=149.9
Q ss_pred EcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCC
Q psy14484 99 YGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGN 178 (430)
Q Consensus 99 ~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (430)
-+-|||.|+..+-..+.... .+..|-+-.|.+..+.......+- . ....+|...... +
T Consensus 104 QslsGTGAl~~~A~Fl~~~~------~~~~VY~SnPTW~nH~~if~~aGf--------~------tv~~Y~yWd~~~--k 161 (410)
T KOG1412|consen 104 QSLSGTGALRIAADFLATFY------NKNTVYVSNPTWENHHAIFEKAGF--------T------TVATYPYWDAEN--K 161 (410)
T ss_pred eeccccchhhhhHHHHHHhc------ccceeEecCCchhHHHHHHHHcCC--------c------eeeeeeeecCCC--c
Confidence 34599999998877554443 566666666666555332221110 0 011122111110 0
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccc----
Q psy14484 179 SANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF---- 254 (430)
Q Consensus 179 ~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~---- 254 (430)
.-|++.+...|...|.....++.-. .+|++| +.|+.|....|.+..++.+.+-.+|-+|.||. .|..
T Consensus 162 ------~~d~e~~Lsdl~~APe~si~iLhaC-AhNPTG-mDPT~EQW~qia~vik~k~lf~fFDiAYQGfA-SGD~~~Da 232 (410)
T KOG1412|consen 162 ------CVDLEGFLSDLESAPEGSIIILHAC-AHNPTG-MDPTREQWKQIADVIKSKNLFPFFDIAYQGFA-SGDLDADA 232 (410)
T ss_pred ------eecHHHHHHHHhhCCCCcEEeeecc-ccCCCC-CCCCHHHHHHHHHHHHhcCceeeeehhhcccc-cCCccccH
Confidence 0166666666766555444555555 788898 88999999999999999999999999999993 4431
Q ss_pred ccccc---CCCCCcee--eeecccCC-CccccEE---EEEcHHHHHhhhccCCcccccccCCCCC-CHHHHHHHHHHHHH
Q psy14484 255 FACEH---AEIWPDFL--CLSKGITG-GYLPLSL---VMTTDKIYNSIYYKNNINIFLHSHSYSG-NPLACCAALATLEI 324 (430)
Q Consensus 255 ~~~~~---~~~~~d~~--~~sK~l~g-G~~~ig~---~~~~~~~~~~~~~~~~~~~~~~~~t~~~-~~~~~~aa~~~l~~ 324 (430)
|+... .+. +=++ +|+|.+|- + -|+|- ++-++.....+.. +-....-++++. ...++..+.+.|..
T Consensus 233 wAiR~fV~~g~-e~fv~QSFaKNfGlYn-eRvGnltvv~~n~a~i~~v~S---Ql~lviR~~~SNPPAyGArIV~kvL~t 307 (410)
T KOG1412|consen 233 WAIRYFVEQGF-ELFVCQSFAKNFGLYN-ERVGNLTVVVNNPAVIAGVKS---QLTLVIRSNWSNPPAYGARIVHKVLST 307 (410)
T ss_pred HHHHHHHhcCC-eEEEEhhhhhhccccc-ccccceEEEecChhHHHHHHH---HHHHHHhhccCCCcchhhHHHHHHhcC
Confidence 22211 121 1123 58997764 3 46663 3334444443332 111122334432 22333344444531
Q ss_pred Hh-hcCHH-------HHHHHHHHHHHHHHHchhcCCC-eee-EeecceEEEEEEeecCCccchhHHHHHHHHHHH-CCcE
Q psy14484 325 FN-KDNIL-------QRISQDMKKITKALTSLITHPK-IIN-FRQKGMIWAFDVIIEDPEQIETFSKKFFVAALK-NELL 393 (430)
Q Consensus 325 ~~-~~~~~-------~~~~~~~~~l~~~l~~l~~~~~-~~~-~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~-~Gv~ 393 (430)
-+ .++|. .++.+.+..|++.|..| ..|+ +.- +...|+|-.--+. ..-.++|.+ +-|+
T Consensus 308 P~lre~W~~sik~MssRI~~MR~aLrd~L~aL-~TPGtWDHI~~QiGMFSyTGLt-----------p~qV~~li~~h~vy 375 (410)
T KOG1412|consen 308 PELREQWIQSIKTMSSRIKKMRTALRDHLVAL-KTPGTWDHITQQIGMFSYTGLT-----------PAQVDHLIENHKVY 375 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCcHHHHHhhccceeecCCC-----------HHHHHHHHHhceEE
Confidence 11 13333 45566666677777766 4444 222 2334443222222 123444544 4666
Q ss_pred EeecCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 394 LRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 394 ~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.-+.| |++++ ..+...++...++|.++++.+
T Consensus 376 Ll~~G---RInis-GLN~~NveyVAkAIde~Vr~~ 406 (410)
T KOG1412|consen 376 LLSDG---RINIS-GLNMKNVEYVAKAIDETVRAI 406 (410)
T ss_pred EecCC---cEeee-ccccccHHHHHHHHHHHHHhh
Confidence 65554 55545 445567888888888887654
No 386
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.22 E-value=0.0014 Score=60.57 Aligned_cols=202 Identities=10% Similarity=0.015 Sum_probs=119.8
Q ss_pred CeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeee--cccCCCcc
Q psy14484 201 KIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITGGYL 278 (430)
Q Consensus 201 ~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s--K~l~gG~~ 278 (430)
+.+-|...+ .....|+..+...+. .. +.++++|-.-.-+++. ..+. +-|++.+| |.+|+.
T Consensus 144 ~~ayv~~~~-NeTi~Gv~v~~~p~~------~~--~~~~v~D~SS~ilsr~---iDvs----k~dviyagaQKnlGpa-- 205 (365)
T COG1932 144 NDAYVHFCW-NETISGVEVPELPDI------GS--DGLLVADASSAILSRP---IDVS----KYDVIYAGAQKNLGPA-- 205 (365)
T ss_pred CccEEEEec-CCcccceEccCCCCC------CC--CceEEEecccHHhcCC---CChh----HcceEEEehhhccCcc--
Confidence 344455555 445567666532221 11 2788999654323221 1111 24778887 899884
Q ss_pred ccEEEEEcHHHHHhhhccCCcc------cccccCCCCCCHH-HHHHHHHHHHHHhh----cCHHHHHHHHHHHHHHHHHc
Q psy14484 279 PLSLVMTTDKIYNSIYYKNNIN------IFLHSHSYSGNPL-ACCAALATLEIFNK----DNILQRISQDMKKITKALTS 347 (430)
Q Consensus 279 ~ig~~~~~~~~~~~~~~~~~~~------~~~~~~t~~~~~~-~~~aa~~~l~~~~~----~~~~~~~~~~~~~l~~~l~~ 347 (430)
.++.++.++++.+.+.....+. .....++++.+|. +......+++.++. +.+.++.++..+.|.+-+++
T Consensus 206 GltvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~ 285 (365)
T COG1932 206 GLTVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDK 285 (365)
T ss_pred ceEEEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 3899999999987765410111 1223566665443 44455566776654 34556777788888887765
Q ss_pred hhcC-CCeeeEeecceE-EEEEEeecCCccchhHHHHHHHHHHHCCcEEeec---CCEEEEeCCCCCCHHHHHHHHHHHH
Q psy14484 348 LITH-PKIINFRQKGMI-WAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI---GNTVYLMPPYILNKNEIQHMTSAIF 422 (430)
Q Consensus 348 l~~~-~~~~~~~~~g~~-~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~---~~~lR~~~~~~~t~e~i~~~~~~l~ 422 (430)
-.-+ +.+.. ..+..| +.|.+. ..++...|...+.++|+..-.+ .+.+|.++--++..|+++.+++-++
T Consensus 286 s~fy~~~v~~-~~RS~mnV~f~~~------~~~ld~~fv~eae~~gl~~lkGhr~vgGmRasiynA~~~e~veaL~~fm~ 358 (365)
T COG1932 286 SDFYRNLVAK-ANRSRMNVTFTLV------DAELDKGFVAEAEAAGLIYLKGHRSVGGLRASIYNAVPLEDVEALTDFMD 358 (365)
T ss_pred CCccccccch-hhccceeEEEEcC------cHHHHHHHHHHHHHcCCceeccccCCCceeeeeecCCCHHHHHHHHHHHH
Confidence 4111 11112 222233 234444 2344567888888888766543 2459999888999999999999998
Q ss_pred HHHHH
Q psy14484 423 QTFNE 427 (430)
Q Consensus 423 ~~l~~ 427 (430)
.+.++
T Consensus 359 ~f~~~ 363 (365)
T COG1932 359 WFEET 363 (365)
T ss_pred HHHHh
Confidence 87654
No 387
>KOG0629|consensus
Probab=98.15 E-value=0.00045 Score=64.58 Aligned_cols=316 Identities=13% Similarity=0.121 Sum_probs=155.9
Q ss_pred HHHHHHhhcCCCCC-eEEEcCCchHHHHHHHHHHHHhhh----hcCCCC-CcEEEEEcCCCCCcchhhhccCCCccchhh
Q psy14484 82 LSEKLSSLTQYKLG-HCFYGSDGASAVEVALKMSFHYWY----NKGFLN-KKKFICLQNSYHGETLGALAVTNIQSFKEI 155 (430)
Q Consensus 82 l~~~l~~~~~~~~~-~v~~~~sgteA~~~al~~~~~~~~----~~g~~~-~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~ 155 (430)
+-.++.+..+...+ .-+|++||+-+|..|+.+++.... .+|... .+-|+..+.--|=+.--+....+
T Consensus 146 vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg------- 218 (510)
T KOG0629|consen 146 VLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLG------- 218 (510)
T ss_pred HHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhc-------
Confidence 33444445443443 678999999999999999885321 112111 13344333333322111111111
Q ss_pred hhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCC---eEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 156 YTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNK---IAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~---~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
+... ..+.++.+.++. -++++||+.|.+...+ +..|-++. ...--|...| |..|.++|
T Consensus 219 ---~gtd-~c~~v~t~e~Gk----------m~~~dLe~kile~k~kg~~Pf~vnaTa-GTTV~GAFDd----L~~iadiC 279 (510)
T KOG0629|consen 219 ---LGTD-HCIKVKTDERGK----------MIPDDLEKKILEAKAKGGVPFFVNATA-GTTVLGAFDD----LNGIADIC 279 (510)
T ss_pred ---cCCc-eeEEecccccCc----------cchHHHHHHHHHHHhcCCCCeEEEecC-CceeeeccCc----HHHHHHHH
Confidence 1111 223344444432 2789999988876322 44444444 3333466666 99999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCC-Cceeeee--cccCCCccccEEEEEcHH-HHHhhhccC-----Cccccc
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIW-PDFLCLS--KGITGGYLPLSLVMTTDK-IYNSIYYKN-----NINIFL 303 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~-~d~~~~s--K~l~gG~~~ig~~~~~~~-~~~~~~~~~-----~~~~~~ 303 (430)
++|+.++++|.+-.|---.....-....|++ .|=++.+ |-+|.. ++.|+.+.+.+ +++...+-. .+..++
T Consensus 280 ~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gap-lqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~Y 358 (510)
T KOG0629|consen 280 EKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAP-LQCSAFLTREEGLLQRCNQMSAIYLFQQDKFY 358 (510)
T ss_pred HhcCEEEEeecccccccccChhhHhhccCccccCceeecHHHhhcCc-chhhHHHHHHHHHHHhhcccchhhhhccCcee
Confidence 9999999999886541011000001223443 3445544 667666 68888887754 333322200 011111
Q ss_pred ccCCCCCCHHHHHH-HHHHHH---HHh---hcCH---HHHHHHHHHHHHHHHHchhcCCCeeeEeecc-eEEEEEEee--
Q psy14484 304 HSHSYSGNPLACCA-ALATLE---IFN---KDNI---LQRISQDMKKITKALTSLITHPKIINFRQKG-MIWAFDVII-- 370 (430)
Q Consensus 304 ~~~t~~~~~~~~~a-a~~~l~---~~~---~~~~---~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g-~~~~~~~~~-- 370 (430)
..+--+++-..+.. =...+. +++ ..++ .++.-+++++|.++|++-+....+....++- ++..+..+.
T Consensus 359 dvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~l 438 (510)
T KOG0629|consen 359 DVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSL 438 (510)
T ss_pred ecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCchHh
Confidence 11111222221111 111121 222 2333 4566779999999998753332222222221 111111110
Q ss_pred cC-Cccchh------HHHHHHHHHHHCCcEEe---ec---CCEEE--EeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 371 ED-PEQIET------FSKKFFVAALKNELLLR---PI---GNTVY--LMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 371 ~~-~~~~~~------~a~~~~~~l~~~Gv~~~---~~---~~~lR--~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
.. ...++. .+-.+...|.++|-... |. ++..| ++++ +.+.++++.+++.|++.-
T Consensus 439 R~~~~~~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~-a~~~ad~dflldEIerlg 507 (510)
T KOG0629|consen 439 RGWQENPERDSRLVKVAPKIKERMMKKGTTMIGYQPLGDKPNFFRMVISNP-ALTEADLDFLLDEIERLG 507 (510)
T ss_pred ccCcccchhhhHHHhhCcHHHHHHHhccceeeEecccccccchhheecccc-hhhhhhHHHHHHHHHHhc
Confidence 00 000110 12345566788886543 32 24445 4433 779999999999887653
No 388
>KOG2467|consensus
Probab=98.01 E-value=0.0041 Score=57.22 Aligned_cols=288 Identities=13% Similarity=0.103 Sum_probs=146.0
Q ss_pred hhcCCCCCe--EEEcC-CchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCC-----CCCcchhhhccCCCccchhhhhcc
Q psy14484 88 SLTQYKLGH--CFYGS-DGASAVEVALKMSFHYWYNKGFLNKKKFICLQNS-----YHGETLGALAVTNIQSFKEIYTSL 159 (430)
Q Consensus 88 ~~~~~~~~~--v~~~~-sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~-----yhg~~~~~~~~~~~~~~~~~~~~~ 159 (430)
+.++.+++. |-+-+ ||+-||.++-.++.. +.++|+.++-- -||+......++....
T Consensus 97 eaF~ldp~kWGVNVQp~SGSPANfavYtall~--------Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~Si-------- 160 (477)
T KOG2467|consen 97 EAFGLDPEKWGVNVQPYSGSPANFAVYTALLK--------PHERIMGLDLPSGGHLSHGYQTPTKKISATSI-------- 160 (477)
T ss_pred HHhCCCHHHCceeeccCCCCchhhHHHhhhcC--------CCCeeeeccCCCCCccccccccCCceeeeeee--------
Confidence 456556663 33333 899999988777775 67778766532 2333222222222111
Q ss_pred CCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEE
Q psy14484 160 LNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHL 239 (430)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~l 239 (430)
.+...|..-.. +-..-|-|.||+..... +++++|+-. +... +..+ ..+++++|.+.|++|
T Consensus 161 ----yFeSmPYkv~~-------~TG~IDYD~Le~~A~~f--rPk~iiaG~---SaY~-R~~D---YaR~R~Iad~~gA~L 220 (477)
T KOG2467|consen 161 ----YFESMPYKVDP-------STGYIDYDKLEKTATLF--RPKLIIAGT---SAYS-RLID---YARFRKIADKVGAYL 220 (477)
T ss_pred ----ecccCceeeCC-------CCCceehHHHHHHHHhc--CCcEEEecc---ccch-hhcc---HHHHHHHHHhcCcee
Confidence 12222211000 00012667787766543 566777633 2211 2222 689999999999999
Q ss_pred EEecccc-CCCCccc-ccccccCCCCCceeee--ecccCCCccccEEEEEcHHHHHh---------------hhccCCcc
Q psy14484 240 IADEIAV-GCGRTGK-FFACEHAEIWPDFLCL--SKGITGGYLPLSLVMTTDKIYNS---------------IYYKNNIN 300 (430)
Q Consensus 240 i~DEv~~-g~g~~g~-~~~~~~~~~~~d~~~~--sK~l~gG~~~ig~~~~~~~~~~~---------------~~~~~~~~ 300 (430)
++|=+|. |+.-.|. ...|+ ..|++|. -|+|-| -|-|.++.++.+... ++. --.
T Consensus 221 m~DMAHISgLVAA~vipsPFe----y~DiVTTTTHKsLRG--PRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINf--aVF 292 (477)
T KOG2467|consen 221 MADMAHISGLVAAGVIPSPFE----YCDIVTTTTHKSLRG--PRGAMIFYRKGVKSIKPKQGKEILYDLEDKINF--AVF 292 (477)
T ss_pred ehhhhhHHHHHhcccCCCccc----ccceeeccccccccC--CcceeEEEeccCCcCCCCCCCcceechhhhhhh--hcc
Confidence 9997764 4422221 12232 2577754 488877 477888887754211 111 001
Q ss_pred cccccCCCCCCHHHHHHHHHHHHHHhhcCHH---HHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccch
Q psy14484 301 IFLHSHSYSGNPLACCAALATLEIFNKDNIL---QRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIE 377 (430)
Q Consensus 301 ~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~---~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 377 (430)
+..++++.+- ..++...+|....++++. +++.++++.|.+.|.+. .+..++.-. ...++.+++. +-.-+ .
T Consensus 293 P~lQGGPHNh---tIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~-Gy~lvtgGT-DnHlvLvDLr-~~G~d-G 365 (477)
T KOG2467|consen 293 PGLQGGPHNH---TIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISR-GYKLVTGGT-DNHLVLVDLR-PKGVD-G 365 (477)
T ss_pred ccccCCCCcc---hHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc-CceEecCCc-cceEEEEecc-ccCCc-h
Confidence 1222333322 222223345544455544 55666777777777654 333332211 2234556665 32211 1
Q ss_pred hHHHHHHHHH---HHCCcEEee----cCCEEEEeCCCC----CCHHHHHHHHHHHHHHHH
Q psy14484 378 TFSKKFFVAA---LKNELLLRP----IGNTVYLMPPYI----LNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 378 ~~a~~~~~~l---~~~Gv~~~~----~~~~lR~~~~~~----~t~e~i~~~~~~l~~~l~ 426 (430)
..++.+++.+ ..++-+... .++.+|+.-+.- ..++|++++.+-|.++++
T Consensus 366 arvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 366 ARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred HHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 1134444432 222222111 146788764433 357888888888877664
No 389
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.72 E-value=0.033 Score=58.85 Aligned_cols=282 Identities=10% Similarity=0.083 Sum_probs=151.6
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhh
Q psy14484 77 KPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIY 156 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~ 156 (430)
+..-+++..++++++.+..+.-+..++|.+-+++ .++++++ ++ +++++++ +.+-|..+...+..-.
T Consensus 124 qal~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~-~ma~~~~--~~--k~~~~~v-~~~~hP~~~~v~~t~~-------- 189 (954)
T PRK12566 124 EALLNFQQMTIDLTGLDLANASLLDEATAAAEAM-ALAKRVA--KS--KSNRFFV-DEHCHPQTLSVLRTRA-------- 189 (954)
T ss_pred HHHHHHHHHHHHHhCchhhhhhhccchhHHHHHH-HHHHHHh--hc--CCCEEEE-CCCCCHHHHHHHHHhh--------
Confidence 4556788889999965655667778888877744 4444432 11 2445544 5556654433222111
Q ss_pred hccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcC
Q psy14484 157 TSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYN 236 (430)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g 236 (430)
.+...+++. +++++.+. ++++++++.. ++ ..|.+-. +++|.++++++|
T Consensus 190 ~~~g~~i~~-----------------------~~~~~~~~---~~~~~v~vq~-P~-~~G~i~d----~~~i~~~~h~~g 237 (954)
T PRK12566 190 EGFGFELVV-----------------------DAVDNLAA---HAVFGALLQY-PD-THGEIRD----LRPLIDQLHGQQ 237 (954)
T ss_pred hcCCcEEEE-----------------------cchhhcCC---CCEEEEEEEC-CC-CceEEcc----HHHHHHHHHHcC
Confidence 111111111 23333342 4688888855 44 3454533 899999999999
Q ss_pred CEEEEeccccCCCCcccccccccC-CCCCceee-----eecccCCCccccEEEEEcHHHHHhhhcc---------CC---
Q psy14484 237 IHLIADEIAVGCGRTGKFFACEHA-EIWPDFLC-----LSKGITGGYLPLSLVMTTDKIYNSIYYK---------NN--- 298 (430)
Q Consensus 237 i~li~DEv~~g~g~~g~~~~~~~~-~~~~d~~~-----~sK~l~gG~~~ig~~~~~~~~~~~~~~~---------~~--- 298 (430)
+++|+--=--.++. +... +...||++ |+=.|+.|+--.|++.+++++...+-.. ++
T Consensus 238 al~~~~~d~laL~l------l~~Pge~GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~ 311 (954)
T PRK12566 238 ALACVAADLLSLLV------LTPPGELGADVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTAL 311 (954)
T ss_pred CEEEEEeCHHHHhC------CCChhhcCCcEEeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeee
Confidence 98774311000111 1111 23467763 4445555543477788888766544320 00
Q ss_pred ----------cccccccCCCCCCHHHHHHHHHHHH--HHhhcCH---HHHHHHHHHHHHHHHHchhcCCCeeeEeecceE
Q psy14484 299 ----------INIFLHSHSYSGNPLACCAALATLE--IFNKDNI---LQRISQDMKKITKALTSLITHPKIINFRQKGMI 363 (430)
Q Consensus 299 ----------~~~~~~~~t~~~~~~~~~aa~~~l~--~~~~~~~---~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~ 363 (430)
.|.-.-.+..+.+. ++.|..+++- .+..+++ .+++..++.++.++|.+. ++... ....|
T Consensus 312 ~l~LqtREQHIRReKAtSNICT~q-aL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~-g~~~~----~~~fF 385 (954)
T PRK12566 312 RMALQTREQHIRREKANSNICTAQ-VLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAK-GIKRL----NRHFF 385 (954)
T ss_pred ehhhhHHHHHhhhccccchhhHHH-HHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc-CCccc----cCCcc
Confidence 00000111222222 2222222222 2222333 345666777888888764 22211 11234
Q ss_pred EEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-CCEEEEeCCCCCCHHHHHHHHHHHH
Q psy14484 364 WAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-GNTVYLMPPYILNKNEIQHMTSAIF 422 (430)
Q Consensus 364 ~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-~~~lR~~~~~~~t~e~i~~~~~~l~ 422 (430)
-.+.+. -+. . +.++.++..+.|+.++.. .+.+.+++.-++|++|++.+++.|.
T Consensus 386 ~~~~v~-~~~---~--~~~~~~~a~~~~~n~r~~~~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 386 DTLTLE-VGG---A--QAAIIESAEAARINLRILGRGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred ceEEEE-ccC---C--HHHHHHHHHHCCCeeEEeCCCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 334443 210 1 467888889999988865 4678899999999999999999883
No 390
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=97.69 E-value=0.0016 Score=58.20 Aligned_cols=185 Identities=10% Similarity=0.042 Sum_probs=105.9
Q ss_pred CHHHHHHHHHHHhhcCCCCCeEEE-cCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchh
Q psy14484 76 HKPVIKLSEKLSSLTQYKLGHCFY-GSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKE 154 (430)
Q Consensus 76 ~~~~~~l~~~l~~~~~~~~~~v~~-~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~ 154 (430)
+.-++.|.+-.++.++....-|.. .-|||-|+..|+...++ +.+..+...++=--.......+.+.. ..
T Consensus 64 D~GRdtLe~vyA~vf~aE~a~VRpq~isGTHAI~~aLfg~LR--------pgDell~i~G~PYDTLeevIG~rg~~--~g 133 (416)
T COG4100 64 DLGRDTLERVYAQVFGAEAALVRPQIISGTHAIACALFGILR--------PGDELLYITGSPYDTLEEVIGLRGEG--QG 133 (416)
T ss_pred ccchhHHHHHHHHHhccccceeeeeeecchhHHHHHHHhccC--------CCCeEEEecCCcchhHHHHhccCCCC--cc
Confidence 345677888888998533332211 24899999999987776 55666655521111111111221110 01
Q ss_pred hhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCc-cc--CChHHHHHHHHH
Q psy14484 155 IYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGM-IM--YDSIYLKLVREI 231 (430)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~-~~--~~~~~l~~l~~l 231 (430)
.+.........++...+.. -|.+.++..+. +++++|.+.- +.|- .- .+-+.++++.++
T Consensus 134 SL~dfgi~Y~~v~Lt~~gk------------iD~~~v~~~i~---~~tkli~IQR----S~GY~~RpS~~I~eI~~~i~~ 194 (416)
T COG4100 134 SLKDFGIKYKAVPLTADGK------------IDIQAVKTAIS---DRTKLIGIQR----SKGYAWRPSLSIAEIEEMITF 194 (416)
T ss_pred cHHHhCcceeecccccCCc------------ccHHHHHHhcC---ccceEEEEEe----ccCcCCCCcccHHHHHHHHHH
Confidence 1112222223333332222 28899999986 6788887644 2221 11 223556777777
Q ss_pred HHh--cCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCCcccc-EEEEEcHHHHHhhh
Q psy14484 232 CNN--YNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPL-SLVMTTDKIYNSIY 294 (430)
Q Consensus 232 ~~~--~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~~~i-g~~~~~~~~~~~~~ 294 (430)
.++ -++++.||.+|..|--. .+...+..|++ ++-|..|||.... |++.+++++.+...
T Consensus 195 vk~inpn~ivFVDNCYGEFvE~-----~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~~ 257 (416)
T COG4100 195 VKEINPNVIVFVDNCYGEFVEE-----KEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAAA 257 (416)
T ss_pred HHhcCCCEEEEEeccchhhhhc-----cCccccchhhhccceeeCCCCceeeccceeechHHHHHhhc
Confidence 776 46899999999877432 12234456766 5779888875454 47888999987754
No 391
>KOG1411|consensus
Probab=97.65 E-value=0.0013 Score=59.99 Aligned_cols=153 Identities=12% Similarity=0.090 Sum_probs=87.9
Q ss_pred eEEEc--CCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeC--CCCC
Q psy14484 96 HCFYG--SDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIIT--TPDS 171 (430)
Q Consensus 96 ~v~~~--~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 171 (430)
++..+ -|||.|.-.+-..+..+. +...|.+++|++-.+.-. +. .-...+.+.. .|..
T Consensus 120 Ri~tvQ~lSGTGaLriga~Fl~~f~------~~~~I~ip~PTWgNh~~i---------f~----~ag~~~~~yrYyd~~t 180 (427)
T KOG1411|consen 120 RIVTVQTLSGTGALRVGAEFLARFY------PSRDIYIPDPTWGNHKNI---------FK----DAGLPVKFYRYYDPKT 180 (427)
T ss_pred ceeEEEeccCcchhhHHHHHHHhhc------cccceeecCCcccccCcc---------cc----ccCcceeeeeeccccc
Confidence 44433 488888888766555543 556777888877443111 11 0001111111 1111
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCc
Q psy14484 172 RNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRT 251 (430)
Q Consensus 172 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~ 251 (430)
.. .|.+.+-+.+.+.++.-..++-.. -+|++| +.|+.+..++|.++.++.+.+-++|-+|.|| -.
T Consensus 181 ~g------------ld~~g~ledl~~~p~gs~ilLhaC-aHNPTG-vDPt~eqw~ki~~~~~~k~~~pffDmAYQGf-aS 245 (427)
T KOG1411|consen 181 RG------------LDFKGMLEDLGEAPEGSIILLHAC-AHNPTG-VDPTKEQWEKISDLIKEKNLLPFFDMAYQGF-AS 245 (427)
T ss_pred cc------------cchHHHHHHHhcCCCCcEEEeehh-hcCCCC-CCccHHHHHHHHHHhhhccccchhhhhhccc-cc
Confidence 11 155555445555544433444455 778888 8899999999999999999999999999998 34
Q ss_pred cccc----cccc-CCCCCcee---eeecccCC-CccccEEE
Q psy14484 252 GKFF----ACEH-AEIWPDFL---CLSKGITG-GYLPLSLV 283 (430)
Q Consensus 252 g~~~----~~~~-~~~~~d~~---~~sK~l~g-G~~~ig~~ 283 (430)
|... +.-. ....-++. +|+|.||- | -++|++
T Consensus 246 G~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYg-ERvGa~ 285 (427)
T KOG1411|consen 246 GDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYG-ERVGAL 285 (427)
T ss_pred CCchhhHHHHHHHHHcCCceEeehhhhhhcchhh-hcccee
Confidence 4421 1100 01112222 68898874 4 477754
No 392
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=97.29 E-value=0.001 Score=54.95 Aligned_cols=58 Identities=7% Similarity=0.047 Sum_probs=49.3
Q ss_pred CCCCHHHHHHHHHHHhhcC----CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCC
Q psy14484 73 NLTHKPVIKLSEKLSSLTQ----YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHG 138 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~----~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg 138 (430)
.+..++++++++++.+.++ .++++|++|+|+++|++.++++++. +++.|++.+|.|+|
T Consensus 92 ~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~d--------pGD~VlVp~P~Y~~ 153 (153)
T PLN02994 92 HGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIAD--------PGDAFLVPTPYYAA 153 (153)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcC--------CCCEEEEeCCCCCC
Confidence 4556788899999988754 4678999999999999999998886 77899999999975
No 393
>KOG3843|consensus
Probab=95.36 E-value=0.056 Score=47.70 Aligned_cols=56 Identities=13% Similarity=0.124 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV 246 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~ 246 (430)
|++++++++.+.++...+.+..+ .....+-.++-+++|..+|..|+++-|+..+|.
T Consensus 142 dleav~~~iee~g~dcilci~st----tscfapr~pd~leaiaaica~~diphivnnayg 197 (432)
T KOG3843|consen 142 DLEAVEAIIEELGEDCILCIHST----TSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYG 197 (432)
T ss_pred hHHHHHHHHHHhCCceEEEEeec----ccccCCCCCchHHHHHHHHHccCchhhhccccc
Confidence 89999999998755433333222 112234456889999999999999999999874
No 394
>KOG2040|consensus
Probab=89.60 E-value=26 Score=35.74 Aligned_cols=278 Identities=12% Similarity=0.163 Sum_probs=135.7
Q ss_pred HHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhc
Q psy14484 79 VIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTS 158 (430)
Q Consensus 79 ~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 158 (430)
...+...+.++.+.+....-+..-||.|-++...+.+.. ++++ ++.+...|..+......... +
T Consensus 165 llNyQTmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~~~-------krkk-~vvd~~~hpqtlsV~~TRa~--------~ 228 (1001)
T KOG2040|consen 165 LLNYQTMITDLTGLPMANASLLDEGTAAAEAMALCNRIN-------KRKK-FVVDSNCHPQTLSVVKTRAK--------G 228 (1001)
T ss_pred HhhhHHhhhhccCCcccchhhhccchhHHHHHHHHHhhc-------ccce-EEecCCCCcchhhhhhcccc--------c
Confidence 334555666777767777777888888877655544432 4445 55667777765554432211 1
Q ss_pred cCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCE
Q psy14484 159 LLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIH 238 (430)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~ 238 (430)
+..++... |+.+.... ..++..+++.- +..+| .+.. ..++.+.+++.|.+
T Consensus 229 ~~i~v~~~--------------------~~~~~~~s----~~~v~gvlvQY-P~t~G-~i~d----~~el~~~a~~~~s~ 278 (1001)
T KOG2040|consen 229 FGIKVVVS--------------------DIKEADYS----SKDVSGVLVQY-PDTEG-SVLD----FDELVELAHANGSL 278 (1001)
T ss_pred cceeEEec--------------------CHHHhhcc----ccceeEEEEEc-CCCCC-cccC----HHHHHHHhhccCce
Confidence 11111111 22221111 35688898876 65554 4655 78899999999987
Q ss_pred EEEec-ccc-CCCCcccccccccCCCCCceee-----eecccCCCccc-cEEEEEcHHHHHh------------------
Q psy14484 239 LIADE-IAV-GCGRTGKFFACEHAEIWPDFLC-----LSKGITGGYLP-LSLVMTTDKIYNS------------------ 292 (430)
Q Consensus 239 li~DE-v~~-g~g~~g~~~~~~~~~~~~d~~~-----~sK~l~gG~~~-ig~~~~~~~~~~~------------------ 292 (430)
+++-- -.+ -+-|.. . ++..||.+ |+=.||-|+ | .|++.+++++...
T Consensus 279 vv~atDLLaLtiLrpP-----g--efGaDIavGSsQRFGVPlGYGG-PHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~ 350 (1001)
T KOG2040|consen 279 VVMATDLLALTILRPP-----G--EFGADIAVGSSQRFGVPLGYGG-PHAAFFAVSESLVRMMPGRIIGVTKDALGKEAY 350 (1001)
T ss_pred EEEeehhhHHHccCCh-----h--hcCceeeeccccccCccccCCC-chHHHHHHHHHHHhhCCCceEeeeecccccHHH
Confidence 66531 111 011110 0 11234443 222233221 2 1122222222211
Q ss_pred ---hhccCCcccccccCCCCCCH-HHHHHHHHHH-HHHhhc----CHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceE
Q psy14484 293 ---IYYKNNINIFLHSHSYSGNP-LACCAALATL-EIFNKD----NILQRISQDMKKITKALTSLITHPKIINFRQKGMI 363 (430)
Q Consensus 293 ---~~~~~~~~~~~~~~t~~~~~-~~~~aa~~~l-~~~~~~----~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~ 363 (430)
++. .++.-.....|.+... -++.|-.+++ .++..+ ++.+++......|..+|+... +. +.....|
T Consensus 351 RLALQT-REQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~ag-he----l~~k~fF 424 (1001)
T KOG2040|consen 351 RLALQT-REQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAG-HE----LQHKPFF 424 (1001)
T ss_pred HHHHHH-HHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcc-hh----hcccccc
Confidence 111 0000000112222211 1222222222 233333 334555556666667776541 11 1111122
Q ss_pred EEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-CCEEEEeCCCCCCHHHHHHHHHHHH
Q psy14484 364 WAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-GNTVYLMPPYILNKNEIQHMTSAIF 422 (430)
Q Consensus 364 ~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-~~~lR~~~~~~~t~e~i~~~~~~l~ 422 (430)
-.+... -+ + .+.++..+..++++.++-. .+.+-+++.-+.+++|++.++..+.
T Consensus 425 DTLkI~-~~---~--s~~~~l~rA~~~~iNlr~~ed~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 425 DTLKIR-CG---C--SAEEVLDRAAKRQINLRLVEDGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred ceEEEE-ec---C--cHHHHHHHHHhhcCceEEeecCceEEeecccccHHHHHHHHHHHc
Confidence 222222 11 1 1467888888888877654 4677888888999999999998875
No 395
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=71.73 E-value=15 Score=34.56 Aligned_cols=83 Identities=12% Similarity=0.296 Sum_probs=55.5
Q ss_pred CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcc-cccccccCCCCCceeeeec-ccCCC
Q psy14484 199 HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTG-KFFACEHAEIWPDFLCLSK-GITGG 276 (430)
Q Consensus 199 ~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g-~~~~~~~~~~~~d~~~~sK-~l~gG 276 (430)
.+++++|++- ++++||....+..-.++|.++.++.-++++++...+ .| .+.+ ...|-+..++ ++.|
T Consensus 95 ~~~vk~vvL~--inSPGG~v~as~~i~~~l~~l~~~~PV~v~v~~~AA----SGGY~IA-----~aAd~I~a~p~si~G- 162 (317)
T COG0616 95 DPSVKAVVLR--INSPGGSVVASELIARALKRLRAKKPVVVSVGGYAA----SGGYYIA-----LAADKIVADPSSITG- 162 (317)
T ss_pred CCCCceEEEE--EECcCCchhHHHHHHHHHHHHhhcCCEEEEECCeec----chhhhhh-----ccCCEEEecCCceee-
Confidence 3567777663 888999998887777888888887767777776433 22 1222 2356666666 4554
Q ss_pred ccccEEEEEcHHHHHhhhc
Q psy14484 277 YLPLSLVMTTDKIYNSIYY 295 (430)
Q Consensus 277 ~~~ig~~~~~~~~~~~~~~ 295 (430)
+||.+...+.+.+.+.+
T Consensus 163 --SIGVi~~~~~~~~l~~k 179 (317)
T COG0616 163 --SIGVISGAPNFEELLEK 179 (317)
T ss_pred --eceeEEecCCHHHHHHh
Confidence 68888888777666655
No 396
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=70.35 E-value=36 Score=31.71 Aligned_cols=55 Identities=11% Similarity=0.025 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecc
Q psy14484 185 RCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEI 244 (430)
Q Consensus 185 ~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv 244 (430)
..+++.+.+.+.+.-.....|++.. .-+.| .+.+++.+|.++|++.|+.+++|-.
T Consensus 113 ~~~~~~~l~~~~~~l~~~d~VvlsG--SlP~g---~~~d~y~~li~~~~~~g~~vilD~S 167 (310)
T COG1105 113 EAELEQFLEQLKALLESDDIVVLSG--SLPPG---VPPDAYAELIRILRQQGAKVILDTS 167 (310)
T ss_pred HHHHHHHHHHHHHhcccCCEEEEeC--CCCCC---CCHHHHHHHHHHHHhcCCeEEEECC
Confidence 3466666666655211222244333 11222 3568999999999999999999954
No 397
>smart00642 Aamy Alpha-amylase domain.
Probab=62.54 E-value=25 Score=29.45 Aligned_cols=47 Identities=15% Similarity=0.094 Sum_probs=34.6
Q ss_pred CeEEEEEccccccCCCc-----------------ccCChHHHHHHHHHHHhcCCEEEEeccccCC
Q psy14484 201 KIAAIIIEPLVQCAGGM-----------------IMYDSIYLKLVREICNNYNIHLIADEIAVGC 248 (430)
Q Consensus 201 ~~~~vi~ep~v~~~~G~-----------------~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~ 248 (430)
-+.+|.+.| ++..... ..-+.+.++++.+.|+++|+-+|+|=|....
T Consensus 32 G~~~I~l~P-i~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~NH~ 95 (166)
T smart00642 32 GVTAIWLSP-IFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVVINHT 95 (166)
T ss_pred CCCEEEECc-ceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 477888888 6544320 2234577999999999999999999886643
No 398
>PF12138 Spherulin4: Spherulation-specific family 4; InterPro: IPR021986 This protein is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 250 and 398 amino acids in length. There is a conserved NPG sequence motif and there are two completely conserved G residues that may be functionally important. Starvation will often induce spherulation - the production of spores - and this process may involve DNA-methylation. Changes in the methylation of spherulin4 are associated with the formation of spherules, but these changes are probably transient. Methylation of the gene accompanies its transcriptional activation, and spherulin4 mRNA is only detectable in late spherulating cultures and mature spherules. It is a spherulation-specific protein.
Probab=60.70 E-value=24 Score=31.87 Aligned_cols=53 Identities=17% Similarity=0.160 Sum_probs=42.2
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCc--ccCChHHHHHHHHHHHhcCCEEE
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGM--IMYDSIYLKLVREICNNYNIHLI 240 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~--~~~~~~~l~~l~~l~~~~gi~li 240 (430)
..+.|..++..++.....+|++| -+++|.. ..|+.+|...|.++-+..|+.+|
T Consensus 17 ~W~~l~~a~~~~p~~~f~vIiNP-~sGPG~~~~~~pd~~Y~~~i~~L~~~~nv~vl 71 (253)
T PF12138_consen 17 AWDPLYDAIAAHPSVPFTVIINP-NSGPGSAPDPWPDANYAAAIPRLNSYANVRVL 71 (253)
T ss_pred chHHHHHHHhcCCCCcEEEEEcC-CCCCCCCCCCCCCHHHHHHHHHHHhcCCCcEE
Confidence 36788888888877778999999 8888743 34999999999999777777655
No 399
>PF13167 GTP-bdg_N: GTP-binding GTPase N-terminal
Probab=58.43 E-value=72 Score=23.92 Aligned_cols=57 Identities=11% Similarity=0.158 Sum_probs=36.4
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCC-EEEEecc
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNI-HLIADEI 244 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi-~li~DEv 244 (430)
++++++...+..+-.+..-++.. ...+......-.+.+++|.++++++++ ++|+|+-
T Consensus 9 ~l~El~~L~~t~g~~vv~~~~q~-~~~~~p~~~iG~GK~eei~~~~~~~~~d~vvfd~~ 66 (95)
T PF13167_consen 9 SLEELEELAETAGYEVVGTVVQK-RRKPDPKTYIGSGKVEEIKELIEELDADLVVFDNE 66 (95)
T ss_pred HHHHHHHHHHHCCCeEEEEEEec-CCCCCcceeechhHHHHHHHHHhhcCCCEEEECCC
Confidence 77888887776554555544433 222222233445678999999999988 7777754
No 400
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=57.99 E-value=2e+02 Score=28.64 Aligned_cols=188 Identities=13% Similarity=0.048 Sum_probs=102.4
Q ss_pred CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEec---cccCCCCccccccc-ccCCCCCceeeeecccCC
Q psy14484 200 NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADE---IAVGCGRTGKFFAC-EHAEIWPDFLCLSKGITG 275 (430)
Q Consensus 200 ~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DE---v~~g~g~~g~~~~~-~~~~~~~d~~~~sK~l~g 275 (430)
+.+.+.+.+| =.--|....-+.++=++|.+..+++=-.|-+|+ +.+|+ -.|+..+. -...+.|..++++|.+.+
T Consensus 314 g~PfLL~~Dp-RleGGaFYlGs~eyE~~I~~~I~~~L~~LgF~~~qLILSGl-SMGTfgAlYYga~l~P~AIiVgKPL~N 391 (511)
T TIGR03712 314 GAPFLLIGDP-RLEGGAFYLGSDEYEQGIINVIQEKLDYLGFDHDQLILSGL-SMGTFGALYYGAKLSPHAIIVGKPLVN 391 (511)
T ss_pred CCCeEEeecc-ccccceeeeCcHHHHHHHHHHHHHHHHHhCCCHHHeeeccc-cccchhhhhhcccCCCceEEEcCcccc
Confidence 5678888888 544444455566666677777665422333343 23455 24543332 223568999999999976
Q ss_pred CccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcCCCee
Q psy14484 276 GYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKII 355 (430)
Q Consensus 276 G~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 355 (430)
+|.+..+.++. ++ ..|. .++..+......--.+.+.++-++|-+.++.. .+...
T Consensus 392 ----LGtiA~n~rL~---RP----------~~F~-------TslDvl~~~~g~~s~~~i~~ln~~fW~~f~~~-d~S~T- 445 (511)
T TIGR03712 392 ----LGTIASRMRLD---RP----------DEFG-------TALDILLLNTGGTSSEDVVKLDNRFWKKFKKS-DLSKT- 445 (511)
T ss_pred ----hhhhhcccccc---CC----------CCCc-------hHHHhHHhhcCCCCHHHHHHHHHHHHHHHhhc-Ccccc-
Confidence 45566665542 11 1111 12233322222223455777888888888654 11111
Q ss_pred eEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 356 NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 356 ~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
-..++.... ++.+..+ ..++...+.++++-+...+-.-| +-.-+++-+.-++...+.+|.
T Consensus 446 -----~F~i~YM~~-DDYD~~A--~~~L~~~l~~~~~~v~~kG~~GR---HNDds~~i~~WF~n~y~~IL~ 505 (511)
T TIGR03712 446 -----TFAIAYMKN-DDYDPTA--FQDLLPYLSKQGAQVMSKGIPGR---HNDDSPTVNSWFINFYNIILE 505 (511)
T ss_pred -----eEEEEeecc-ccCCHHH--HHHHHHHHHhcCCEEEecCCCCC---CCCCchHHHHHHHHHHHHHHH
Confidence 112222233 4443222 46788888888888765431111 223356677778877777665
No 401
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=56.94 E-value=14 Score=31.74 Aligned_cols=37 Identities=22% Similarity=0.247 Sum_probs=28.9
Q ss_pred CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEE
Q psy14484 199 HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIA 241 (430)
Q Consensus 199 ~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~ 241 (430)
+-.+++||||- ++- .|.... ..++.+++++||+.+|.
T Consensus 154 Gl~Pa~VicEi-~~~-dG~mar----~~~~~~fa~~h~l~~it 190 (203)
T COG0108 154 GLKPAGVICEI-MND-DGTMAR----LPELEEFAKEHGLPVIT 190 (203)
T ss_pred CCCCcEEEEEE-eCC-CccccC----hHHHHHHHHHcCCcEEE
Confidence 34679999996 655 555666 78899999999998774
No 402
>PRK08883 ribulose-phosphate 3-epimerase; Provisional
Probab=54.07 E-value=1.6e+02 Score=26.04 Aligned_cols=54 Identities=22% Similarity=0.273 Sum_probs=28.9
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcC--CEEEEe
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYN--IHLIAD 242 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g--i~li~D 242 (430)
.++.++..+... +.+-.+.++| ..+-...+....+.++++.++..+++ +++.+|
T Consensus 118 p~~~i~~~l~~~-D~vlvMtV~P-GfgGq~fi~~~lekI~~l~~~~~~~~~~~~I~vd 173 (220)
T PRK08883 118 PLHHLEYIMDKV-DLILLMSVNP-GFGGQSFIPHTLDKLRAVRKMIDESGRDIRLEID 173 (220)
T ss_pred CHHHHHHHHHhC-CeEEEEEecC-CCCCceecHhHHHHHHHHHHHHHhcCCCeeEEEE
Confidence 456677777542 4555555666 33221233344445566666665554 666677
No 403
>COG4294 Uve UV damage repair endonuclease [DNA replication, recombination, and repair]
Probab=51.82 E-value=1.9e+02 Score=26.72 Aligned_cols=22 Identities=23% Similarity=0.356 Sum_probs=19.5
Q ss_pred HHHHHHHHHhcCCEEEEecccc
Q psy14484 225 LKLVREICNNYNIHLIADEIAV 246 (430)
Q Consensus 225 l~~l~~l~~~~gi~li~DEv~~ 246 (430)
.+++.-+|.+.+|++++|--+-
T Consensus 219 ~eelL~lCek~~iPlVfD~HHh 240 (347)
T COG4294 219 TEELLPLCEKLNIPLVFDAHHH 240 (347)
T ss_pred HHHHHHHHHHhCCCEEEechhh
Confidence 6789999999999999997654
No 404
>TIGR00629 uvde UV damage endonuclease UvdE. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=51.42 E-value=2.1e+02 Score=26.78 Aligned_cols=22 Identities=18% Similarity=0.318 Sum_probs=19.2
Q ss_pred HHHHHHHHHhcCCEEEEecccc
Q psy14484 225 LKLVREICNNYNIHLIADEIAV 246 (430)
Q Consensus 225 l~~l~~l~~~~gi~li~DEv~~ 246 (430)
++++..+|++.+|++++|=.|-
T Consensus 201 l~evL~lc~e~~iP~v~D~hHh 222 (312)
T TIGR00629 201 VEDLLPVCEELNIPFVLDFHHH 222 (312)
T ss_pred HHHHHHHHHhcCCCEEEEhHHh
Confidence 8999999999999999995443
No 405
>KOG2862|consensus
Probab=50.93 E-value=1.7e+02 Score=27.38 Aligned_cols=71 Identities=14% Similarity=0.101 Sum_probs=39.4
Q ss_pred cccCCCCCHHHHHHHHHHHhhcccc------ccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHh
Q psy14484 45 VNLFGHSNSYINKALKNQLNKLEHV------MLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHY 117 (430)
Q Consensus 45 ~~~lG~~~p~v~~a~~~~~~~~~~~------~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~ 117 (430)
.+++||-+|++.+.+.+......+. ..+.....-.-.+...+..++. +-++++....|.=+-. |..+++++
T Consensus 38 ~~~lgh~sPe~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~le-Pgd~vLv~~~G~wg~r-a~D~~~r~ 114 (385)
T KOG2862|consen 38 RPSLGHMSPEFVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLE-PGDNVLVVSTGTWGQR-AADCARRY 114 (385)
T ss_pred CCccccCCHHHHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcC-CCCeEEEEEechHHHH-HHHHHHhh
Confidence 5789999999887777655443211 1111111112233344555553 4468888888865533 44566665
No 406
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=49.33 E-value=20 Score=36.75 Aligned_cols=35 Identities=14% Similarity=0.083 Sum_probs=30.7
Q ss_pred cCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc
Q psy14484 219 MYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK 253 (430)
Q Consensus 219 ~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~ 253 (430)
--+++-++++.+.|+++||-+|+|=|+..|+..+.
T Consensus 210 yGtPedfk~fVD~aH~~GIgViLD~V~~HF~~d~~ 244 (628)
T COG0296 210 YGTPEDFKALVDAAHQAGIGVILDWVPNHFPPDGN 244 (628)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEEecCCcCCCCcc
Confidence 34678899999999999999999999999977665
No 407
>KOG3974|consensus
Probab=46.97 E-value=27 Score=31.36 Aligned_cols=49 Identities=20% Similarity=0.192 Sum_probs=35.2
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEec
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADE 243 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DE 243 (430)
+.+.+++.+ ++.-++++-| ..+-. ..-...+++|.+++++.++++++|.
T Consensus 91 av~~i~k~L----~RlhavVIGP-GLGRd---p~~~k~i~~iley~~~~dvP~VIDa 139 (306)
T KOG3974|consen 91 AVDIIEKLL----QRLHAVVIGP-GLGRD---PAILKEIAKILEYLRGKDVPLVIDA 139 (306)
T ss_pred hHhHHHHHH----hheeEEEECC-CCCCC---HHHHHHHHHHHHHHhcCCCcEEEcC
Confidence 567777777 4788888877 44332 2222446789999999999999995
No 408
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=43.93 E-value=57 Score=28.56 Aligned_cols=48 Identities=23% Similarity=0.416 Sum_probs=31.1
Q ss_pred HHHHHHHHHhCCCCeEEEEE-ccccccCCCcccCChHHHHHHHHHHHhcCCEEEEec
Q psy14484 188 IFDLEILLKKNHNKIAAIII-EPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADE 243 (430)
Q Consensus 188 ~~~le~~l~~~~~~~~~vi~-ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DE 243 (430)
++.+|++++ .+ +.++.. +- +... ... .+..+++.++|++|++.||+++
T Consensus 24 ~~~ve~al~--~G-v~~vQlR~K--~~~~--~~~-~~~a~~~~~lc~~~~v~liINd 72 (211)
T COG0352 24 LEWVEAALK--GG-VTAVQLREK--DLSD--EEY-LALAEKLRALCQKYGVPLIIND 72 (211)
T ss_pred HHHHHHHHh--CC-CeEEEEecC--CCCh--HHH-HHHHHHHHHHHHHhCCeEEecC
Confidence 788899997 33 444444 43 1111 110 3556799999999999888875
No 409
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=42.97 E-value=1.3e+02 Score=25.65 Aligned_cols=66 Identities=9% Similarity=0.073 Sum_probs=44.2
Q ss_pred ceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-CCEEE--EeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 361 GMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-GNTVY--LMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 361 g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-~~~lR--~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
|..+||.=. + .+.+...|..+.+.|.++|+.+.-. |+.+| ++..+..++++=.+-+.++.++.+-+
T Consensus 23 ~~viW~TGL-S-GsGKSTiA~ale~~L~~~G~~~y~LDGDnvR~gL~~dLgFs~edR~eniRRvaevAkll 91 (197)
T COG0529 23 GAVIWFTGL-S-GSGKSTIANALEEKLFAKGYHVYLLDGDNVRHGLNRDLGFSREDRIENIRRVAEVAKLL 91 (197)
T ss_pred CeEEEeecC-C-CCCHHHHHHHHHHHHHHcCCeEEEecChhHhhcccCCCCCChHHHHHHHHHHHHHHHHH
Confidence 445554332 2 2234455789999999999988765 56777 44556778888777777777665433
No 410
>PLN02672 methionine S-methyltransferase
Probab=42.46 E-value=2.2e+02 Score=31.82 Aligned_cols=24 Identities=21% Similarity=0.141 Sum_probs=21.1
Q ss_pred CCCCCeEEEcCCchHHHHHHHHHH
Q psy14484 91 QYKLGHCFYGSDGASAVEVALKMS 114 (430)
Q Consensus 91 ~~~~~~v~~~~sgteA~~~al~~~ 114 (430)
|..+++|++.+|-..|++.++++.
T Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~ 469 (1082)
T PLN02672 446 PLTPDNVVVFPSRAVAIENALRLF 469 (1082)
T ss_pred cCCccceEEeccHHHHHHHHHHhh
Confidence 567889999999999999999865
No 411
>PF13481 AAA_25: AAA domain; PDB: 1G8Y_J 1OLO_A 1NLF_C.
Probab=41.69 E-value=61 Score=27.48 Aligned_cols=53 Identities=17% Similarity=0.277 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCC----hHHHHHHHHHHHhcCCEEEE
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYD----SIYLKLVREICNNYNIHLIA 241 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~----~~~l~~l~~l~~~~gi~li~ 241 (430)
+++.+++.+.+. .++.+|++++ ...-.+.-.-+ ..++..+.++|+++|+.+|+
T Consensus 128 ~~~~l~~~~~~~-~~~~lvviD~-l~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~vi~ 184 (193)
T PF13481_consen 128 DLEELEAALKEL-YGPDLVVIDP-LQSLHDGDENSNSAVAQLMQELKRLAKEYGVAVIL 184 (193)
T ss_dssp HHHHHHHHHTT-----SEEEEE--GGGG--S-TT-HHHHHHHHHHHHHHHHHH--EEEE
T ss_pred HHHHHHHHHhhc-CCCcEEEEcC-HHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 577888888752 2477899998 76654431111 25788999999999986554
No 412
>smart00839 ELFV_dehydrog Glutamate/Leucine/Phenylalanine/Valine dehydrogenase. Glutamate, leucine, phenylalanine and valine dehydrogenases are structurally and functionally related. They contain a Gly-rich region containing a conserved Lys residue, which has been implicated in the catalytic activity, in each case a reversible oxidative deamination reaction.
Probab=40.74 E-value=96 Score=23.51 Aligned_cols=48 Identities=10% Similarity=0.144 Sum_probs=30.2
Q ss_pred HHHHHHHHCCcEEeec-----CCEEEEeCCCCC----CHHHHH-HHHHHHHHHHHHhh
Q psy14484 382 KFFVAALKNELLLRPI-----GNTVYLMPPYIL----NKNEIQ-HMTSAIFQTFNEVI 429 (430)
Q Consensus 382 ~~~~~l~~~Gv~~~~~-----~~~lR~~~~~~~----t~e~i~-~~~~~l~~~l~~~~ 429 (430)
.-.+.|.++||.+.|. |+.+....-... +++++. +..+.+.+.+.+++
T Consensus 39 ~a~~~L~~rGi~~~PD~~~NaGGvi~s~~E~~~~~~~~~e~v~~~~~~~i~~~~~~v~ 96 (102)
T smart00839 39 EADDILEDRGVLYAPDFAANAGGVIVSALEMLQNLARTAEEVFTDLSEIMRNALEEIF 96 (102)
T ss_pred HHHHHHHHCCCEEcCcceecCCCEEeehhhhhcccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3566778999999884 444432221111 666655 78888888877664
No 413
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins. This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins.
Probab=40.66 E-value=3e+02 Score=25.68 Aligned_cols=37 Identities=5% Similarity=0.144 Sum_probs=23.8
Q ss_pred EccccccCCCcccCChHHHHHHHHHHHhcCCEEEEe-cccc
Q psy14484 207 IEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIAD-EIAV 246 (430)
Q Consensus 207 ~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~D-Ev~~ 246 (430)
.+. +..+||.+..-.. ..+.-+|+.|++++++= |.+.
T Consensus 205 Ad~-v~~nG~v~nk~GT--~~lA~~Ak~~~vPv~V~a~s~K 242 (303)
T TIGR00524 205 ADR-IARNGDVANKIGT--YQLAVLAKEFRIPFFVAAPLST 242 (303)
T ss_pred ccE-EecCCCEeEhhhH--HHHHHHHHHhCCCEEEeccccc
Confidence 477 7777775544322 35566789999988864 4444
No 414
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=37.96 E-value=3.4e+02 Score=25.36 Aligned_cols=33 Identities=6% Similarity=0.147 Sum_probs=21.7
Q ss_pred EccccccCCCcccCChHHHHHHHHHHHhcCCEEEEe
Q psy14484 207 IEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIAD 242 (430)
Q Consensus 207 ~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~D 242 (430)
.+. +..+||....... ..+.-+|+.|++++++=
T Consensus 196 Ad~-v~~nG~v~nkiGT--~~~A~~Ak~~~vPv~V~ 228 (310)
T PRK08535 196 ADA-ITANGAVINKIGT--SQIALAAHEARVPFMVA 228 (310)
T ss_pred ccE-EecCCCEEeHHhH--HHHHHHHHHhCCCEEEe
Confidence 466 7777765544322 35566789999988864
No 415
>PRK13602 putative ribosomal protein L7Ae-like; Provisional
Probab=37.95 E-value=1.3e+02 Score=21.78 Aligned_cols=44 Identities=11% Similarity=0.146 Sum_probs=30.3
Q ss_pred HHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEec
Q psy14484 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADE 243 (430)
Q Consensus 189 ~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DE 243 (430)
++..+++++ ++..+|++-. - .++...+.+..+|++++++++.-.
T Consensus 17 ~~v~kai~~--gkaklViiA~--------D-~~~~~~~~i~~~c~~~~Vp~~~~~ 60 (82)
T PRK13602 17 KQTVKALKR--GSVKEVVVAE--------D-ADPRLTEKVEALANEKGVPVSKVD 60 (82)
T ss_pred HHHHHHHHc--CCeeEEEEEC--------C-CCHHHHHHHHHHHHHcCCCEEEEC
Confidence 445566663 5677777654 2 233568999999999999887554
No 416
>COG1197 Mfd Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription]
Probab=37.84 E-value=2.3e+02 Score=31.51 Aligned_cols=136 Identities=21% Similarity=0.179 Sum_probs=69.6
Q ss_pred CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC
Q psy14484 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS 171 (430)
Q Consensus 92 ~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (430)
..+|+.++.--|..=.+.|||+|..+-+ .+..|.++.|+ |..+.+ ....|+..|..+...+...+--
T Consensus 614 kpMDRLiCGDVGFGKTEVAmRAAFkAV~-----~GKQVAvLVPT----TlLA~Q--Hy~tFkeRF~~fPV~I~~LSRF-- 680 (1139)
T COG1197 614 KPMDRLICGDVGFGKTEVAMRAAFKAVM-----DGKQVAVLVPT----TLLAQQ--HYETFKERFAGFPVRIEVLSRF-- 680 (1139)
T ss_pred CcchheeecCcCCcHHHHHHHHHHHHhc-----CCCeEEEEccc----HHhHHH--HHHHHHHHhcCCCeeEEEeccc--
Confidence 4678999999999999999998876531 22344444432 222222 1123455555544444222210
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHhC-CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCC
Q psy14484 172 RNINKGNSANEIARCAIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGR 250 (430)
Q Consensus 172 ~~~~~~~~~~~~~~~d~~~le~~l~~~-~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~ 250 (430)
.+..+.+.++.+. .+++-.||-.+ ... .. ++.=+.=.++|+||=|. ||.
T Consensus 681 --------------~s~kE~~~il~~la~G~vDIvIGTH--------rLL-----~k--dv~FkdLGLlIIDEEqR-FGV 730 (1139)
T COG1197 681 --------------RSAKEQKEILKGLAEGKVDIVIGTH--------RLL-----SK--DVKFKDLGLLIIDEEQR-FGV 730 (1139)
T ss_pred --------------CCHHHHHHHHHHHhcCCccEEEech--------Hhh-----CC--CcEEecCCeEEEechhh-cCc
Confidence 0222223333322 46777776655 111 00 01111224899999986 765
Q ss_pred cccccccccCCCCCceeeeec
Q psy14484 251 TGKFFACEHAEIWPDFLCLSK 271 (430)
Q Consensus 251 ~g~~~~~~~~~~~~d~~~~sK 271 (430)
..+- -.....-..|++|+|-
T Consensus 731 k~KE-kLK~Lr~~VDvLTLSA 750 (1139)
T COG1197 731 KHKE-KLKELRANVDVLTLSA 750 (1139)
T ss_pred cHHH-HHHHHhccCcEEEeeC
Confidence 4321 1222334578998885
No 417
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=37.51 E-value=3.3e+02 Score=25.01 Aligned_cols=33 Identities=12% Similarity=0.213 Sum_probs=20.4
Q ss_pred EccccccCCCcccCChHHHHHHHHHHHhcCCEEEEe
Q psy14484 207 IEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIAD 242 (430)
Q Consensus 207 ~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~D 242 (430)
.+. +..+|+...--.. -.+.-+|+.|++++++=
T Consensus 185 AD~-I~~nG~v~NKiGT--~~lA~~Ak~~~vPfyV~ 217 (275)
T PRK08335 185 ADN-VTRDGYVVNKAGT--YLLALACHDNGVPFYVA 217 (275)
T ss_pred ccE-EecCCCEeehhhH--HHHHHHHHHcCCCEEEE
Confidence 466 6666664433222 24566789999988763
No 418
>KOG2792|consensus
Probab=37.44 E-value=1.1e+02 Score=27.66 Aligned_cols=88 Identities=19% Similarity=0.266 Sum_probs=57.2
Q ss_pred EEEECCCCEEE--ecccccccccCCCCC-----HHHHHHHHHHHhhcccc----ccCCCC--C---HHHHHHHHHHHhhc
Q psy14484 27 SLIDVSGKRYL--DAISSWWVNLFGHSN-----SYINKALKNQLNKLEHV----MLSNLT--H---KPVIKLSEKLSSLT 90 (430)
Q Consensus 27 ~~~d~~g~~~l--D~~~~~~~~~lG~~~-----p~v~~a~~~~~~~~~~~----~~~~~~--~---~~~~~l~~~l~~~~ 90 (430)
.++|.+|+... ||...|-..+||+.| |+=.+-+.+.++.+... ..+-+. + +..+.+++.+.+..
T Consensus 123 ~L~d~~Gk~~te~df~Gkw~LiYFGFThCPDICPdELeKm~~~Vd~i~~~~~~~~~PlFIsvDPeRD~~~~~~eY~~eF~ 202 (280)
T KOG2792|consen 123 SLVDHDGKRVTEKDFLGKWSLIYFGFTHCPDICPDELEKMSAVVDEIEAKPGLPPVPLFISVDPERDSVEVVAEYVSEFH 202 (280)
T ss_pred EEEecCCCeecccccccceEEEEecccCCCCcChHHHHHHHHHHHHHhccCCCCccceEEEeCcccCCHHHHHHHHHhcC
Confidence 78999998874 699999999999853 55556666655543211 111111 1 34566777777765
Q ss_pred CCCCCeEEEcCCchHHHHHHHHHHHHhh
Q psy14484 91 QYKLGHCFYGSDGASAVEVALKMSFHYW 118 (430)
Q Consensus 91 ~~~~~~v~~~~sgteA~~~al~~~~~~~ 118 (430)
| .++=..|.+|.+..+.+..|.|+
T Consensus 203 p----kllGLTGT~eqvk~vak~yRVYf 226 (280)
T KOG2792|consen 203 P----KLLGLTGTTEQVKQVAKKYRVYF 226 (280)
T ss_pred h----hhhcccCCHHHHHHHHHHhEEee
Confidence 4 45556778888887777766654
No 419
>PF02677 DUF208: Uncharacterized BCR, COG1636; InterPro: IPR003828 This entry describes proteins of unknown function.
Probab=36.83 E-value=87 Score=26.50 Aligned_cols=42 Identities=17% Similarity=0.290 Sum_probs=32.9
Q ss_pred HHhCCCCeEEEEEccccccCCCcccCChHHHH---HHHHHHHhcCCEEEEec
Q psy14484 195 LKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLK---LVREICNNYNIHLIADE 243 (430)
Q Consensus 195 l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~---~l~~l~~~~gi~li~DE 243 (430)
|.+.+-++.+++.+| .+.|..||.+ ++.++|++.|+.+|+++
T Consensus 18 L~~~g~~vt~~fyNP-------NIhP~~Ey~~R~~~~~~~~~~~~i~~i~~~ 62 (176)
T PF02677_consen 18 LREEGFDVTGYFYNP-------NIHPYEEYERRLEELKRFAEKLGIPLIEGD 62 (176)
T ss_pred HHHCCCCeEEEEeCC-------CCCcHHHHHHHHHHHHHHHHHcCCCEEecC
Confidence 333345788999888 2778888874 77889999999999997
No 420
>PF00834 Ribul_P_3_epim: Ribulose-phosphate 3 epimerase family; InterPro: IPR000056 Ribulose-phosphate 3-epimerase (5.1.3.1 from EC) (also known as pentose-5-phosphate 3-epimerase or PPE) is the enzyme that converts D-ribulose 5-phosphate into D-xylulose 5-phosphate in Calvin's reductive pentose phosphate cycle. In Ralstonia eutropha (Alcaligenes eutrophus) two copies of the gene coding for PPE are known [], one is chromosomally encoded P40117 from SWISSPROT, the other one is on a plasmid Q04539 from SWISSPROT. PPE has been found in a wide range of bacteria, archaebacteria, fungi and plants. All the proteins have from 209 to 241 amino acid residues. The enzyme has a TIM barrel structure.; GO: 0004750 ribulose-phosphate 3-epimerase activity, 0005975 carbohydrate metabolic process; PDB: 3CTL_A 3CT7_D 3CU2_A 1RPX_A 3OVR_A 3OVP_A 3OVQ_B 3QC3_B 3INP_A 1TQJ_D ....
Probab=36.64 E-value=1.2e+02 Score=26.37 Aligned_cols=70 Identities=13% Similarity=0.161 Sum_probs=30.1
Q ss_pred ecccccccccCCCCCHHHHHHHHHHHhhcc--ccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHH
Q psy14484 38 DAISSWWVNLFGHSNSYINKALKNQLNKLE--HVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSF 115 (430)
Q Consensus 38 D~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~ 115 (430)
|..-|..+.+++. .|.+.+++++.....- |.+. ..+.. +.+.+.+. +.+.+.|=.-.++-....++.++
T Consensus 32 DiMDg~fvpn~~~-g~~~i~~i~~~~~~~~DvHLMv-~~P~~----~i~~~~~~---g~~~i~~H~E~~~~~~~~i~~ik 102 (201)
T PF00834_consen 32 DIMDGHFVPNLTF-GPDIIKAIRKITDLPLDVHLMV-ENPER----YIEEFAEA---GADYITFHAEATEDPKETIKYIK 102 (201)
T ss_dssp EEEBSSSSSSB-B--HHHHHHHHTTSSSEEEEEEES-SSGGG----HHHHHHHH---T-SEEEEEGGGTTTHHHHHHHHH
T ss_pred eecccccCCcccC-CHHHHHHHhhcCCCcEEEEeee-ccHHH----HHHHHHhc---CCCEEEEcccchhCHHHHHHHHH
Confidence 4444444555654 3677777766521111 1121 12222 22333333 55556554444444444556665
Q ss_pred H
Q psy14484 116 H 116 (430)
Q Consensus 116 ~ 116 (430)
.
T Consensus 103 ~ 103 (201)
T PF00834_consen 103 E 103 (201)
T ss_dssp H
T ss_pred H
Confidence 4
No 421
>PF07131 DUF1382: Protein of unknown function (DUF1382); InterPro: IPR009814 This entry is represented by Bacteriophage lambda, Xis. This entry overlaps with IPR009750, both representing lambda Xis. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several hypothetical Escherichia coli and Bacteriophage lambda-like proteins of around 60 residues in length. The function of this family is unknown.
Probab=35.51 E-value=1.4e+02 Score=20.03 Aligned_cols=39 Identities=10% Similarity=0.215 Sum_probs=28.8
Q ss_pred HHHHHHHHHCCcEEeecCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 381 KKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 381 ~~~~~~l~~~Gv~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.+.++.|.+.|| ||-|-...+++|...+-+.+.+-|.++
T Consensus 13 lE~A~~La~~GI---------RFVpiPv~~dee~~~L~s~~~~kLe~m 51 (61)
T PF07131_consen 13 LEMAHSLAHIGI---------RFVPIPVVTDEEFHTLSSQLSQKLERM 51 (61)
T ss_pred HHHHHHHHHcCc---------eeeccccccHHHHHHHHHHHHHHHHHH
Confidence 456666666666 777777889999988888777776654
No 422
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=34.90 E-value=3.8e+02 Score=24.96 Aligned_cols=37 Identities=8% Similarity=0.114 Sum_probs=23.5
Q ss_pred EccccccCCCcccCChHHHHHHHHHHHhcCCEEEEe-cccc
Q psy14484 207 IEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIAD-EIAV 246 (430)
Q Consensus 207 ~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~D-Ev~~ 246 (430)
.+. +..+||....... ..+.-+|+.|++++++= |.+.
T Consensus 191 ad~-v~~nG~v~nkiGT--~~lA~~Ak~~~vPv~V~a~~~K 228 (301)
T TIGR00511 191 ADA-ITANGALINKIGT--SQLALAAREARVPFMVAAETYK 228 (301)
T ss_pred ccE-EecCCCEEEHHhH--HHHHHHHHHhCCCEEEEcccce
Confidence 577 7777775544222 35566889999988864 4443
No 423
>COG0821 gcpE 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase [Lipid metabolism]
Probab=33.77 E-value=4.1e+02 Score=25.07 Aligned_cols=26 Identities=27% Similarity=0.272 Sum_probs=21.2
Q ss_pred cCChHHHHHHHHHHHhcCCEEEEecc
Q psy14484 219 MYDSIYLKLVREICNNYNIHLIADEI 244 (430)
Q Consensus 219 ~~~~~~l~~l~~l~~~~gi~li~DEv 244 (430)
+|+.+-.+.+.+++++-+++|+.|=.
T Consensus 57 v~~~e~A~A~~~Ik~~~~vPLVaDiH 82 (361)
T COG0821 57 VPDMEAAEALKEIKQRLNVPLVADIH 82 (361)
T ss_pred cCCHHHHHHHHHHHHhCCCCEEEEee
Confidence 45556688899999999999999943
No 424
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase. Chlamydial members of the family have a long insert. The family is largely restricted to Bacteria, where it is widely but not universally distributed. No homology can be detected between the GcpE family and other proteins.
Probab=33.62 E-value=3.3e+02 Score=25.73 Aligned_cols=26 Identities=23% Similarity=0.174 Sum_probs=21.8
Q ss_pred ccCChHHHHHHHHHHHhcCCEEEEec
Q psy14484 218 IMYDSIYLKLVREICNNYNIHLIADE 243 (430)
Q Consensus 218 ~~~~~~~l~~l~~l~~~~gi~li~DE 243 (430)
.+|+.+..+.+.++.+...++|+.|=
T Consensus 54 avp~~~~A~al~~I~~~~~iPlVADI 79 (346)
T TIGR00612 54 TVPDRESAAAFEAIKEGTNVPLVADI 79 (346)
T ss_pred cCCCHHHHHhHHHHHhCCCCCEEEee
Confidence 45666778899999999999999994
No 425
>PF07894 DUF1669: Protein of unknown function (DUF1669); InterPro: IPR012461 This family is composed of sequences derived from hypothetical eukaryotic proteins of unknown function. Some members of this family are annotated as being potential phospholipases but no literature was found to support this.
Probab=33.31 E-value=2.4e+02 Score=25.98 Aligned_cols=49 Identities=16% Similarity=0.214 Sum_probs=36.3
Q ss_pred HHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCC--EEEEecccc
Q psy14484 188 IFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNI--HLIADEIAV 246 (430)
Q Consensus 188 ~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi--~li~DEv~~ 246 (430)
.+.+++.|++ ..++.||+++- .-+.+.+.+|.+.|.++++ +++.|+...
T Consensus 136 KE~vR~~I~~-A~kVIAIVMD~---------FTD~dIf~DLleAa~kR~VpVYiLLD~~~~ 186 (284)
T PF07894_consen 136 KEVVRRMIQQ-AQKVIAIVMDV---------FTDVDIFCDLLEAANKRGVPVYILLDEQNL 186 (284)
T ss_pred HHHHHHHHHH-hcceeEEEeec---------cccHHHHHHHHHHHHhcCCcEEEEechhcC
Confidence 4566777776 36788888764 3466779999999977776 788998643
No 426
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=33.01 E-value=3.6e+02 Score=25.17 Aligned_cols=41 Identities=7% Similarity=-0.036 Sum_probs=29.0
Q ss_pred EEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCC
Q psy14484 204 AIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG 249 (430)
Q Consensus 204 ~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g 249 (430)
..+++- .++.. -.|.++.++.+..+++..|+ +.|=||+|-.
T Consensus 246 ~~~~dy-~~~~Y--g~p~~e~~e~i~~~~~~eGi--llDpVYtgKa 286 (323)
T COG2515 246 LLSDDY-HHPGY--GKPNEEDIEAIKLLARLEGI--LLDPVYTGKA 286 (323)
T ss_pred EEEecc-cCCcc--CCcCHHHHHHHHHHHHhhCc--ccccccchHH
Confidence 334443 44434 46778999999999999997 6799988643
No 427
>KOG2433|consensus
Probab=32.74 E-value=1.8e+02 Score=27.93 Aligned_cols=61 Identities=18% Similarity=0.133 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHhhcccc-ccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHH
Q psy14484 53 SYINKALKNQLNKLEHV-MLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFH 116 (430)
Q Consensus 53 p~v~~a~~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~ 116 (430)
-+|.+++.+.-++.... +.....-. .++.--|.++++. -.+++++++|+|-.+.+-.+|+.
T Consensus 436 rEiQqaLvdi~DKpA~FVGSrQWIGS--tEis~vLn~ll~~-~skil~v~sGaEva~~~rELA~H 497 (577)
T KOG2433|consen 436 REIQQALVDIQDKPAKFVGSRQWIGS--TEISFVLNELLKL-ESKILAVNSGAEVAERVRELARH 497 (577)
T ss_pred HHHHHHHHhccCcccceecccceecc--hhHHHHHHHHhcc-ceEEEEeccccHHHHHHHHHHHH
Confidence 46777776655554322 11111111 1233345555531 14899999999999988877775
No 428
>PF04748 Polysacc_deac_2: Divergent polysaccharide deacetylase; InterPro: IPR006837 This is a family of uncharacterised proteins that includes YibQ.; PDB: 2QV5_A 2NLY_A.
Probab=32.23 E-value=2.3e+02 Score=24.80 Aligned_cols=23 Identities=30% Similarity=0.351 Sum_probs=12.1
Q ss_pred cccCCCCCHHHHHHHHHHHhhcc
Q psy14484 45 VNLFGHSNSYINKALKNQLNKLE 67 (430)
Q Consensus 45 ~~~lG~~~p~v~~a~~~~~~~~~ 67 (430)
....+.+..++.+.+...+....
T Consensus 66 ~L~~~~~~~~i~~~l~~al~~vp 88 (213)
T PF04748_consen 66 ALLTGMSEEEIRKRLEAALARVP 88 (213)
T ss_dssp -B-TTS-HHHHHHHHHHHHCCST
T ss_pred cccCCCCHHHHHHHHHHHHHHCC
Confidence 44444555666677776666543
No 429
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=32.09 E-value=2e+02 Score=23.15 Aligned_cols=56 Identities=18% Similarity=0.255 Sum_probs=34.0
Q ss_pred HHHHHHHHHHhCCCCeE-EEEEccccccCCCcccCChHHHHHHHHHHH-hc-CC-EEEEecccc
Q psy14484 187 AIFDLEILLKKNHNKIA-AIIIEPLVQCAGGMIMYDSIYLKLVREICN-NY-NI-HLIADEIAV 246 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~-~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~-~~-gi-~li~DEv~~ 246 (430)
+++.|.+.+.++ ++. .|+--| .+. .|...+.....++..+.++ +. ++ +..+||-+|
T Consensus 39 ~~~~l~~li~~~--~i~~iVvGlP-~~~-~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~T 98 (135)
T PF03652_consen 39 DIEELKKLIEEY--QIDGIVVGLP-LNM-DGSESEQARRVRKFAEELKKRFPGIPVILVDERLT 98 (135)
T ss_dssp CHHHHHHHHHHC--CECEEEEEEE-BBC-TSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCS
T ss_pred HHHHHHHHHHHh--CCCEEEEeCC-ccc-CCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChh
Confidence 789999999975 344 444455 444 4445555555554444444 44 77 567899776
No 430
>PRK00014 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=30.46 E-value=71 Score=28.27 Aligned_cols=35 Identities=14% Similarity=0.207 Sum_probs=26.9
Q ss_pred CeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEE
Q psy14484 201 KIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIA 241 (430)
Q Consensus 201 ~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~ 241 (430)
...+++||- ++- .|.... ..++.+++++||+.+|.
T Consensus 172 ~P~~vicEi-l~~-dG~ma~----~~~l~~fA~~~~l~iis 206 (230)
T PRK00014 172 RPAGVLCEL-MNA-DGTMMR----GASLERYAAKEGLVALA 206 (230)
T ss_pred CceEEEEEE-eCC-CCCccC----HHHHHHHHHHcCCcEEE
Confidence 468899986 554 465655 88999999999997753
No 431
>PRK11633 cell division protein DedD; Provisional
Probab=30.33 E-value=3.1e+02 Score=24.33 Aligned_cols=45 Identities=7% Similarity=-0.016 Sum_probs=37.6
Q ss_pred HHHHHHHHHHCCcEEee------cCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q psy14484 380 SKKFFVAALKNELLLRP------IGNTVYLMPPYILNKNEIQHMTSAIFQT 424 (430)
Q Consensus 380 a~~~~~~l~~~Gv~~~~------~~~~lR~~~~~~~t~e~i~~~~~~l~~~ 424 (430)
+..+...|...|+-... .|...|+.+.-..++++++..+..|++.
T Consensus 163 A~~l~~kL~~~G~~Ay~~~~~~~~G~~tRV~VGP~~sk~~ae~~~~~Lk~~ 213 (226)
T PRK11633 163 VNEIVAKLRLSGYRVYTVPSTPVQGKITRIYVGPDASKDKLKGSLGELKQL 213 (226)
T ss_pred HHHHHHHHHHCCCeeEEEeeecCCCcEEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 68899999999986543 2457789889999999999999999874
No 432
>COG0514 RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair]
Probab=29.71 E-value=82 Score=32.27 Aligned_cols=72 Identities=18% Similarity=0.283 Sum_probs=42.6
Q ss_pred HHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccC--CCCCcee
Q psy14484 190 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHA--EIWPDFL 267 (430)
Q Consensus 190 ~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~--~~~~d~~ 267 (430)
.+...+. .+++..+.+.| -...++.|++.|. +-.-.++++||+|+ . +.| ++.||..
T Consensus 98 ~v~~~l~--~g~~klLyisP-------Erl~~~~f~~~L~---~~~i~l~vIDEAHC-i---------SqWGhdFRP~Y~ 155 (590)
T COG0514 98 QVLNQLK--SGQLKLLYISP-------ERLMSPRFLELLK---RLPISLVAIDEAHC-I---------SQWGHDFRPDYR 155 (590)
T ss_pred HHHHHHh--cCceeEEEECc-------hhhcChHHHHHHH---hCCCceEEechHHH-H---------hhcCCccCHhHH
Confidence 3344443 36789999988 1445556666555 33456999999998 3 122 2456655
Q ss_pred eee---cccCCCccccEEEEE
Q psy14484 268 CLS---KGITGGYLPLSLVMT 285 (430)
Q Consensus 268 ~~s---K~l~gG~~~ig~~~~ 285 (430)
-++ +.+.. .|+-++.+
T Consensus 156 ~lg~l~~~~~~--~p~~AlTA 174 (590)
T COG0514 156 RLGRLRAGLPN--PPVLALTA 174 (590)
T ss_pred HHHHHHhhCCC--CCEEEEeC
Confidence 444 34443 57777743
No 433
>TIGR03677 rpl7ae 50S ribosomal protein L7Ae. Multifunctional RNA-binding protein that recognizes the K-turn motif in ribosomal RNA, box H/ACA, box C/D and box C'/D' sRNAs. Interacts with protein L15e.
Probab=29.25 E-value=1.8e+02 Score=22.65 Aligned_cols=45 Identities=7% Similarity=0.132 Sum_probs=29.7
Q ss_pred HHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEec
Q psy14484 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADE 243 (430)
Q Consensus 189 ~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DE 243 (430)
.+..+++++ ++..+|++-. -..+.+..+.+..+|++++++++.-.
T Consensus 32 ~~v~kaikk--gka~LVilA~--------D~s~~~~~~~i~~lc~~~~Ip~~~~~ 76 (117)
T TIGR03677 32 NEVTKAVER--GIAKLVVIAE--------DVEPPEIVAHLPALCEEKGIPYVYVK 76 (117)
T ss_pred HHHHHHHHc--CCccEEEEeC--------CCCcHHHHHHHHHHHHHcCCCEEEeC
Confidence 455566663 5677777655 22233457899999999999876543
No 434
>PF01248 Ribosomal_L7Ae: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; InterPro: IPR004038 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, ribosomal protein L30 from eukaryotes and archaebacteria, Gadd45 and MyD118 [].; PDB: 2CZW_A 3V7E_B 2QEX_F 1YJ9_F 1VQ8_F 1YJN_F 3I56_F 1VQ6_F 2OTJ_F 1YIJ_F ....
Probab=28.96 E-value=2e+02 Score=21.07 Aligned_cols=45 Identities=20% Similarity=0.181 Sum_probs=28.6
Q ss_pred HHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHH-HHHHHHhcCCEEEEecc
Q psy14484 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKL-VREICNNYNIHLIADEI 244 (430)
Q Consensus 189 ~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~-l~~l~~~~gi~li~DEv 244 (430)
.+..+.+.. ++..++++.. -..+ ..... +..+|++++|+++.=..
T Consensus 21 ~~v~k~l~~--~~~~lvilA~--------d~~~-~~~~~~l~~~c~~~~Ip~~~~~s 66 (95)
T PF01248_consen 21 KEVLKALKK--GKAKLVILAE--------DCSP-DSIKKHLPALCEEKNIPYVFVPS 66 (95)
T ss_dssp HHHHHHHHT--TCESEEEEET--------TSSS-GHHHHHHHHHHHHTTEEEEEESH
T ss_pred HHHHHHHHc--CCCcEEEEcC--------CCCh-hhhcccchhheeccceeEEEECC
Confidence 455666763 4666666654 1222 22555 89999999998876553
No 435
>PRK10785 maltodextrin glucosidase; Provisional
Probab=28.58 E-value=1.2e+02 Score=31.39 Aligned_cols=62 Identities=15% Similarity=0.158 Sum_probs=41.8
Q ss_pred HHHHHHHHHHhC-CCCeEEEEEccccccCCCcc-------------cCChHHHHHHHHHHHhcCCEEEEeccccCCC
Q psy14484 187 AIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMI-------------MYDSIYLKLVREICNNYNIHLIADEIAVGCG 249 (430)
Q Consensus 187 d~~~le~~l~~~-~~~~~~vi~ep~v~~~~G~~-------------~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g 249 (430)
|+..+.+.|.-. .=-+.+|.+.| +....+.. .-+.+.++++++.|+++|+-||+|=|....+
T Consensus 177 Dl~GI~~kLdYL~~LGv~~I~L~P-if~s~s~hgYd~~Dy~~iDp~~Gt~~df~~Lv~~aH~rGikVilD~V~NH~~ 252 (598)
T PRK10785 177 DLDGISEKLPYLKKLGVTALYLNP-IFTAPSVHKYDTEDYRHVDPQLGGDAALLRLRHATQQRGMRLVLDGVFNHTG 252 (598)
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCC-cccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEECCCcCC
Confidence 556555555432 12477899999 65443221 2244679999999999999999998866443
No 436
>PRK00910 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=28.57 E-value=81 Score=27.70 Aligned_cols=35 Identities=11% Similarity=0.119 Sum_probs=27.3
Q ss_pred CeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEE
Q psy14484 201 KIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIA 241 (430)
Q Consensus 201 ~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~ 241 (430)
..++++||- ++- .|.... ..++.+++++||+.+|.
T Consensus 168 ~p~~vicEi-l~~-dG~ma~----~~~l~~fA~~h~l~~is 202 (218)
T PRK00910 168 QPAGVLCEL-TNP-DGTMAK----TPEIIAFGKLHNMPVLT 202 (218)
T ss_pred CceEEEEEE-ecC-CCCcCC----HHHHHHHHHHcCCcEEE
Confidence 468899997 664 465655 88999999999998753
No 437
>PF04002 RadC: RadC-like JAB domain; InterPro: IPR001405 This family was named initially with reference to the Escherichia coli radC102 mutation which suggested that RadC was involved in repair of DNA lesions []. However the relevant mutation has subsequently been shown to be in recG, not radC []. In addition all attempts to characterise a radiation-related function for RadC in Streptococcus pneumoniae failed, suggesting that it is not involved in repair of DNA lesions, in recombination during transformation, in gene conversion, nor in mismatch repair [].; PDB: 2QLC_A.
Probab=28.36 E-value=1.8e+02 Score=22.81 Aligned_cols=46 Identities=13% Similarity=0.080 Sum_probs=26.5
Q ss_pred HHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHH---HHHHHHHHhcCCEE
Q psy14484 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYL---KLVREICNNYNIHL 239 (430)
Q Consensus 189 ~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l---~~l~~l~~~~gi~l 239 (430)
+-+++++.. +..+.+++ .|.+.|...|+.+-+ +.|.+.|+.-|+-|
T Consensus 55 ~I~~~al~~--~A~~vIl~---HNHPsG~~~PS~~D~~~T~~L~~~~~~l~I~l 103 (123)
T PF04002_consen 55 EIFRRALRL--NASSVILA---HNHPSGDPEPSDADIALTRRLKKAARLLGIEL 103 (123)
T ss_dssp HHHHHHHHT--T-SEEEEE---EE-TTS--S--HHHHHHHHHHHHHHHHHT-EE
T ss_pred HHHHHHHhh--CCceEEEE---EEcCCCCCCCCHhHHHHHHHHHHHHHHcCCee
Confidence 566777874 33344443 456667788888777 78899999888764
No 438
>PRK01792 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=28.30 E-value=82 Score=27.59 Aligned_cols=35 Identities=17% Similarity=0.283 Sum_probs=27.2
Q ss_pred CeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEE
Q psy14484 201 KIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIA 241 (430)
Q Consensus 201 ~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~ 241 (430)
...+++||- ++ ..|.... ..++.+++++||+.+|.
T Consensus 167 ~p~~vicEi-l~-~dG~ma~----~~~~~~fA~~~~l~~is 201 (214)
T PRK01792 167 KEAGVICEI-TN-DDGTMAR----TPEIVEFAKKFGYAVVT 201 (214)
T ss_pred CceEEEEEE-ec-CCCCccC----HHHHHHHHHHcCCcEEE
Confidence 468899986 64 4465655 88999999999998764
No 439
>PRK09722 allulose-6-phosphate 3-epimerase; Provisional
Probab=28.26 E-value=4.3e+02 Score=23.50 Aligned_cols=51 Identities=12% Similarity=0.202 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHH---HHHHhcC--CEEEEe
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVR---EICNNYN--IHLIAD 242 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~---~l~~~~g--i~li~D 242 (430)
+++.++..+... +.+-.+.++| .. +| -..-++-+++|. ++..+++ +.+-+|
T Consensus 120 ~~~~l~~~l~~v-D~VLvMsV~P-Gf--~G-Q~fi~~~l~KI~~lr~~~~~~~~~~~IeVD 175 (229)
T PRK09722 120 PVESIKYYIHLL-DKITVMTVDP-GF--AG-QPFIPEMLDKIAELKALRERNGLEYLIEVD 175 (229)
T ss_pred CHHHHHHHHHhc-CEEEEEEEcC-CC--cc-hhccHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 567777777542 4555666666 33 34 333344444444 4545554 667777
No 440
>COG4422 Bacteriophage protein gp37 [Function unknown]
Probab=27.50 E-value=1.1e+02 Score=25.93 Aligned_cols=46 Identities=11% Similarity=0.286 Sum_probs=31.6
Q ss_pred hCCCCeEEEEEccccccCC------------------CcccCChHHHHHHHHHHHhcCCEEEEe
Q psy14484 197 KNHNKIAAIIIEPLVQCAG------------------GMIMYDSIYLKLVREICNNYNIHLIAD 242 (430)
Q Consensus 197 ~~~~~~~~vi~ep~v~~~~------------------G~~~~~~~~l~~l~~l~~~~gi~li~D 242 (430)
+.|..+.-+.+||.+.+-. +..+.+++|+.+|...|+++|..+.+-
T Consensus 159 qVPAavRFvS~EPLiGsv~g~~L~~I~WaIvGGESGp~aR~idp~WvdeI~~~C~~~~~aFFFK 222 (250)
T COG4422 159 QVPAAVRFVSFEPLIGSVDGINLTNIHWAIVGGESGPNARPIDPQWVDEIEDMCRDAGTAFFFK 222 (250)
T ss_pred cCchheEEeeccccccccccccccceeEEEecCcCCCCCCCCCHHHHHHHHHHHHhcCccchhH
Confidence 3355677777777322222 234667899999999999999876654
No 441
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=27.46 E-value=4.3e+02 Score=24.10 Aligned_cols=111 Identities=14% Similarity=0.076 Sum_probs=52.1
Q ss_pred CCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCC
Q psy14484 93 KLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSR 172 (430)
Q Consensus 93 ~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (430)
.-..+++|-|-+..+..+++.+.... .+-+|++.+..-+..-... -..+.....++..+ +
T Consensus 106 ~~~~~ILT~~~S~~v~~~l~~a~~~~------~~~~V~v~es~P~~eG~~~---------a~~L~~~gi~v~~i--~--- 165 (282)
T PF01008_consen 106 NDGDTILTHGYSSTVERFLLSAKKKG------KKFRVIVLESRPYNEGRLM---------AKELAEAGIPVTLI--P--- 165 (282)
T ss_dssp -TTEEEEEES--SHHHHHHHHHHHTT------EEEEEEEE--TTTTHHHTH---------HHHHHHTT-EEEEE------
T ss_pred cCCeEEEEeCCchHHHHHHHHHHHcC------CeEEEEEccCCcchhhhhH---------HHHhhhcceeEEEE--e---
Confidence 34578888888888888887765521 2345666553322211000 00011111122222 2
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEe
Q psy14484 173 NINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIAD 242 (430)
Q Consensus 173 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~D 242 (430)
| .++-..+.+ .-+...+=.+. +..+||.+.....+ .+.-.|+++++++++=
T Consensus 166 --------------d-~~~~~~m~~-~vd~VliGad~-v~~nG~v~nk~Gt~--~~a~~Ak~~~vPv~v~ 216 (282)
T PF01008_consen 166 --------------D-SAVGYVMPR-DVDKVLIGADA-VLANGGVVNKVGTL--QLALAAKEFNVPVYVL 216 (282)
T ss_dssp --------------G-GGHHHHHHC-TESEEEEE-SE-EETTS-EEEETTHH--HHHHHHHHTT-EEEEE
T ss_pred --------------c-hHHHHHHHH-hCCeeEEeeeE-EecCCCEeehhhHH--HHHHHHHhhCCCEEEE
Confidence 1 344455652 12344555577 88887755443333 4556789999988875
No 442
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=26.92 E-value=1.8e+02 Score=23.57 Aligned_cols=49 Identities=14% Similarity=0.137 Sum_probs=27.6
Q ss_pred HHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEe
Q psy14484 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIAD 242 (430)
Q Consensus 189 ~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~D 242 (430)
+.|+++++..+.....+++.| .. + ..+..++-+.+.++|+++.-+.++|
T Consensus 67 ~nl~~ii~~~~~~~~ivlv~~-~~-~---~~~~~~~n~~~~~~a~~~~~v~~id 115 (150)
T cd01840 67 DQLDELLDALGPDRQVYLVNP-HV-P---RPWEPDVNAYLLDAAKKYKNVTIID 115 (150)
T ss_pred HHHHHHHHHcCCCCEEEEEEC-CC-C---cchHHHHHHHHHHHHHHCCCcEEec
Confidence 344444544444466677776 41 1 2233455567888999994344555
No 443
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=26.90 E-value=90 Score=27.03 Aligned_cols=35 Identities=26% Similarity=0.283 Sum_probs=27.4
Q ss_pred CeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEE
Q psy14484 201 KIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIA 241 (430)
Q Consensus 201 ~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~ 241 (430)
...+++||- ++- .|.... ..++.+++++|++.+|.
T Consensus 157 ~p~~vicEi-l~~-dG~m~~----~~~~~~fA~~~~l~~is 191 (199)
T TIGR00506 157 KPAGVICEM-MND-DGTMAR----KPELMEYAKKHNLKLIS 191 (199)
T ss_pred CceEEEEEE-eCC-CCCccC----HHHHHHHHHHcCCcEEE
Confidence 468899997 654 565555 88999999999998763
No 444
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=26.84 E-value=83 Score=27.14 Aligned_cols=36 Identities=14% Similarity=0.173 Sum_probs=26.8
Q ss_pred CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEE
Q psy14484 200 NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIA 241 (430)
Q Consensus 200 ~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~ 241 (430)
-...+++||- ++- .|.... .+++.+++++|+++++.
T Consensus 151 l~p~avi~ei-l~~-dG~~~~----~~~~~~fA~~~~l~~vs 186 (194)
T PF00926_consen 151 LSPVAVICEI-LDD-DGDMAR----RDELEEFAKKHGLPIVS 186 (194)
T ss_dssp S-SBEEEEEB-BET-TSSBHC----HHHHHHHHHHTT-EEEE
T ss_pred CCCcEEEEEE-eCC-CCCcCC----HHHHHHHHHHcCCcEEE
Confidence 3578899986 654 665666 88999999999998774
No 445
>KOG0352|consensus
Probab=26.37 E-value=1.2e+02 Score=29.63 Aligned_cols=58 Identities=21% Similarity=0.363 Sum_probs=34.0
Q ss_pred CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCC-EEEEeccccCCCCcccccccccCCCCCceeeeec
Q psy14484 199 HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNI-HLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSK 271 (430)
Q Consensus 199 ~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi-~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK 271 (430)
..+++.+.+.| - ...+..|..-|..+..++-. +++|||+|+ ..- |.. ++.||.+.++-
T Consensus 111 kp~~K~LYITP-E------~AAt~~FQ~lLn~L~~r~~L~Y~vVDEAHC-VSQ----WGH---DFRPDYL~LG~ 169 (641)
T KOG0352|consen 111 KPTIKMLYITP-E------GAATDGFQKLLNGLANRDVLRYIVVDEAHC-VSQ----WGH---DFRPDYLTLGS 169 (641)
T ss_pred CCceeEEEEch-h------hhhhhhHHHHHHHHhhhceeeeEEechhhh-Hhh----hcc---ccCcchhhhhh
Confidence 45788888888 2 22333334444445444432 799999997 211 111 35699998874
No 446
>PRK01018 50S ribosomal protein L30e; Reviewed
Probab=26.22 E-value=2.5e+02 Score=21.12 Aligned_cols=42 Identities=10% Similarity=-0.058 Sum_probs=29.3
Q ss_pred HHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEE
Q psy14484 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIA 241 (430)
Q Consensus 189 ~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~ 241 (430)
....+.+++ ++..+|++-. - .+++..+.+..+|++++++++.
T Consensus 22 ~~v~kai~~--gkaklViiA~--------D-~~~~~~~~i~~~c~~~~Ip~~~ 63 (99)
T PRK01018 22 KRTIKAIKL--GKAKLVIVAS--------N-CPKDIKEDIEYYAKLSGIPVYE 63 (99)
T ss_pred HHHHHHHHc--CCceEEEEeC--------C-CCHHHHHHHHHHHHHcCCCEEE
Confidence 344555653 5677777654 2 2457789999999999999754
No 447
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=26.21 E-value=66 Score=29.50 Aligned_cols=28 Identities=14% Similarity=0.116 Sum_probs=23.6
Q ss_pred ChHHHHHHHHHHHhcCCEEEEeccccCC
Q psy14484 221 DSIYLKLVREICNNYNIHLIADEIAVGC 248 (430)
Q Consensus 221 ~~~~l~~l~~l~~~~gi~li~DEv~~g~ 248 (430)
+.+.++++.+.|+++|+-+|+|=|....
T Consensus 50 t~~d~~~Lv~~~h~~gi~VilD~V~NH~ 77 (316)
T PF00128_consen 50 TMEDFKELVDAAHKRGIKVILDVVPNHT 77 (316)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEETSEE
T ss_pred hhhhhhhhhhccccccceEEEeeecccc
Confidence 4567999999999999999999886533
No 448
>PRK04175 rpl7ae 50S ribosomal protein L7Ae; Validated
Probab=26.09 E-value=2.1e+02 Score=22.50 Aligned_cols=46 Identities=7% Similarity=0.062 Sum_probs=29.2
Q ss_pred HHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecc
Q psy14484 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEI 244 (430)
Q Consensus 189 ~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv 244 (430)
++..+++++ ++..+|++-. -..+.+..+.+..+|++++++++.-..
T Consensus 36 ~~v~kaikk--gkakLVilA~--------D~s~~~i~~~~~~lc~~~~Vp~~~~~t 81 (122)
T PRK04175 36 NETTKAVER--GIAKLVVIAE--------DVDPEEIVAHLPLLCEEKKIPYVYVPS 81 (122)
T ss_pred HHHHHHHHc--CCccEEEEeC--------CCChHHHHHHHHHHHHHcCCCEEEECC
Confidence 344556663 4566666644 222334468999999999998765543
No 449
>PF06153 DUF970: Protein of unknown function (DUF970); InterPro: IPR010375 This is a family of uncharacterised bacterial proteins.; PDB: 3M05_A.
Probab=25.99 E-value=34 Score=26.34 Aligned_cols=47 Identities=9% Similarity=0.072 Sum_probs=30.5
Q ss_pred HHHHHHHHHHCCcEEeec---CCEEE---EeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 380 SKKFFVAALKNELLLRPI---GNTVY---LMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 380 a~~~~~~l~~~Gv~~~~~---~~~lR---~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
+..+.+.|.++|+.+... |+.+| -++-....++++++.++.|++...
T Consensus 13 a~~l~~~L~~~g~~~TkLsstGGFLr~GNtTlliGvede~v~~vl~iIk~~c~ 65 (109)
T PF06153_consen 13 ADDLSDALNENGFRVTKLSSTGGFLREGNTTLLIGVEDEKVDEVLEIIKENCK 65 (109)
T ss_dssp HHHHHHHHHHTT--EEEEEEEETTTTEEEEEEEEEEEGGGHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHCCceEEEEecccceeccCCEEEEEEecHHHHHHHHHHHHHhhc
Confidence 578999999999987641 21111 112235688999999999998764
No 450
>PRK13601 putative L7Ae-like ribosomal protein; Provisional
Probab=25.55 E-value=2.7e+02 Score=20.21 Aligned_cols=44 Identities=11% Similarity=0.217 Sum_probs=30.4
Q ss_pred HHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecc
Q psy14484 190 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEI 244 (430)
Q Consensus 190 ~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv 244 (430)
...++++ .++..+|++-. - .+++..+.+.++|+.++++++....
T Consensus 15 ~vlkaIk--~gkakLViiA~--------D-a~~~~~k~i~~~c~~~~Vpv~~~~t 58 (82)
T PRK13601 15 QTLKAIT--NCNVLQVYIAK--------D-AEEHVTKKIKELCEEKSIKIVYIDT 58 (82)
T ss_pred HHHHHHH--cCCeeEEEEeC--------C-CCHHHHHHHHHHHHhCCCCEEEeCC
Confidence 4445565 35777777654 1 2346689999999999999865543
No 451
>PF05430 Methyltransf_30: S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR008471 This entry contains several uncharacterised bacterial proteins with no known function.; GO: 0016645 oxidoreductase activity, acting on the CH-NH group of donors, 0055114 oxidation-reduction process; PDB: 2E58_D 3SGL_A 3PVC_A 3AWI_D 3PS9_A 2QY6_A.
Probab=25.07 E-value=1.5e+02 Score=23.45 Aligned_cols=46 Identities=9% Similarity=0.073 Sum_probs=31.9
Q ss_pred HHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCE
Q psy14484 192 EILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIH 238 (430)
Q Consensus 192 e~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~ 238 (430)
++.+.+....+-++..++ ..+.----+++.++++.|.++|+..+++
T Consensus 41 ~~~l~~l~~~~Da~ylDg-FsP~~nPelWs~e~~~~l~~~~~~~~~l 86 (124)
T PF05430_consen 41 REMLPQLDARFDAWYLDG-FSPAKNPELWSEELFKKLARLSKPGGTL 86 (124)
T ss_dssp HHHHHHB-T-EEEEEE-S-S-TTTSGGGSSHHHHHHHHHHEEEEEEE
T ss_pred HHHHHhCcccCCEEEecC-CCCcCCcccCCHHHHHHHHHHhCCCcEE
Confidence 344444446788999988 6665555689999999999999987654
No 452
>TIGR00140 hupD hydrogenase expression/formation protein. C at 64 and 67 are believed to be metal binding. Postulated to be involved in processing or hydrogenase. Superfamily suggests that it is a peptidase/protease.
Probab=24.46 E-value=3.6e+02 Score=21.31 Aligned_cols=48 Identities=15% Similarity=0.091 Sum_probs=32.0
Q ss_pred HHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcc
Q psy14484 82 LSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGET 140 (430)
Q Consensus 82 l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~ 140 (430)
++++|.+.++ .++.+.+..+|+...+.+-.+. +.+.+|+.+...-|..
T Consensus 3 v~~~L~~~~~-~~~~v~vid~gt~~~~l~~~l~----------~~d~viiVDA~~~g~~ 50 (134)
T TIGR00140 3 LVEALQQRYA-FPDNVTLLDGGTQGLYLLPLIE----------SADRLIILDAVDYGLE 50 (134)
T ss_pred HHHHHHHhCC-CCCCeEEEecCccHHHHHHHHh----------cCCeEEEEecccCCCC
Confidence 4566766654 3456878888988887765553 4577888886654543
No 453
>PRK00366 ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Reviewed
Probab=24.33 E-value=6.3e+02 Score=24.13 Aligned_cols=26 Identities=23% Similarity=0.170 Sum_probs=21.9
Q ss_pred ccCChHHHHHHHHHHHhcCCEEEEec
Q psy14484 218 IMYDSIYLKLVREICNNYNIHLIADE 243 (430)
Q Consensus 218 ~~~~~~~l~~l~~l~~~~gi~li~DE 243 (430)
.+|+.+..+.+.+++++-.++||.|=
T Consensus 62 av~~~~~a~al~~I~~~~~iPlvADI 87 (360)
T PRK00366 62 AVPDMEAAAALPEIKKQLPVPLVADI 87 (360)
T ss_pred ccCCHHHHHhHHHHHHcCCCCEEEec
Confidence 45666778999999999999999993
No 454
>KOG1465|consensus
Probab=24.07 E-value=5.9e+02 Score=23.71 Aligned_cols=119 Identities=13% Similarity=0.137 Sum_probs=64.6
Q ss_pred CCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCc-EEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC
Q psy14484 93 KLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKK-KFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS 171 (430)
Q Consensus 93 ~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~-~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (430)
-..+|++|.|.+..++.-++.|... +|. .|++-+ ++.... + + ...++.. ..+......|
T Consensus 161 hsnEviLT~g~SrTV~~FL~~A~kk-------~Rkf~viVaE-~~p~~q-g------H-~~Ak~la--~~giettVI~-- 220 (353)
T KOG1465|consen 161 HSNEVILTLGSSRTVENFLKHAAKK-------GRKFRVIVAE-GAPNNQ-G------H-ELAKPLA--QAGIETTVIP-- 220 (353)
T ss_pred ccCceEEecCccHHHHHHHHHHHhc-------cCceEEEEee-cCCccc-c------h-HhhHHHH--HcCCeeEEec--
Confidence 3468999999999999999988763 233 344433 332221 0 0 0011111 1112222233
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCc
Q psy14484 172 RNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRT 251 (430)
Q Consensus 172 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~ 251 (430)
| .++-+.+.+. + ++|+...-+..+||.+.|... ..++..+++|-+++++= +|+.+.
T Consensus 221 ---------------d-aaVfA~MsrV-n--KVIigt~avl~NGgl~~~~G~--~~vAlaAk~h~vPv~Vl---Ap~yKL 276 (353)
T KOG1465|consen 221 ---------------D-AAVFAMMSRV-N--KVIIGTHAVLANGGLRAPSGV--HTVALAAKHHSVPVIVL---APMYKL 276 (353)
T ss_pred ---------------c-HHHHHHhhhc-c--eEEEEeeeEecCCCeeccchH--HHHHHHHHhcCCcEEEe---cchhhc
Confidence 2 3444555432 1 334443338888897777554 45667788899999875 456554
Q ss_pred cccc
Q psy14484 252 GKFF 255 (430)
Q Consensus 252 g~~~ 255 (430)
-+.+
T Consensus 277 sPly 280 (353)
T KOG1465|consen 277 SPLY 280 (353)
T ss_pred CCCC
Confidence 4333
No 455
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=24.01 E-value=2.8e+02 Score=22.02 Aligned_cols=57 Identities=14% Similarity=0.059 Sum_probs=31.7
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHH-HHHhcCC-EEEEecccc
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVRE-ICNNYNI-HLIADEIAV 246 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~-l~~~~gi-~li~DEv~~ 246 (430)
+++.|++.++++. -...|+--| .+. .|...+.....++..+ +.++.++ +..+||-+|
T Consensus 36 ~~~~l~~~i~~~~-~~~iVvGlP-~~~-dG~~~~~a~~v~~f~~~L~~~~~~~v~~~DEr~T 94 (130)
T TIGR00250 36 DWSRIEELLKEWT-PDKIVVGLP-LNM-DGTEGPLTERAQKFANRLEGRFGVPVVLWDERLS 94 (130)
T ss_pred HHHHHHHHHHHcC-CCEEEEecc-CCC-CcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcC
Confidence 6889999998763 223444456 544 4444443333333222 3334465 668898766
No 456
>COG2022 ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]
Probab=23.81 E-value=5.2e+02 Score=23.06 Aligned_cols=21 Identities=24% Similarity=0.409 Sum_probs=14.8
Q ss_pred HHHHHHHhcCCEEEEeccccCCCC
Q psy14484 227 LVREICNNYNIHLIADEIAVGCGR 250 (430)
Q Consensus 227 ~l~~l~~~~gi~li~DEv~~g~g~ 250 (430)
.|.-++.+.++++|+|. |+|.
T Consensus 173 ~l~iiie~a~VPviVDA---GiG~ 193 (262)
T COG2022 173 NLEIIIEEADVPVIVDA---GIGT 193 (262)
T ss_pred HHHHHHHhCCCCEEEeC---CCCC
Confidence 44555666689999995 6754
No 457
>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism]
Probab=23.16 E-value=5e+02 Score=22.52 Aligned_cols=35 Identities=14% Similarity=0.396 Sum_probs=28.1
Q ss_pred eEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEec
Q psy14484 202 IAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADE 243 (430)
Q Consensus 202 ~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DE 243 (430)
+.+|+++- . ...+++.+..+.+++.+.|+++|+=-
T Consensus 83 ~~~v~IDE-a------QF~~~~~v~~l~~lad~lgi~Vi~~G 117 (201)
T COG1435 83 VDCVLIDE-A------QFFDEELVYVLNELADRLGIPVICYG 117 (201)
T ss_pred cCEEEEeh-h------HhCCHHHHHHHHHHHhhcCCEEEEec
Confidence 66788866 3 56677889999999999999999753
No 458
>cd07571 ALP_N-acyl_transferase Apolipoprotein N-acyl transferase (class 9 nitrilases). ALP N-acyl transferase (Lnt), is an essential membrane-bound enzyme in gram-negative bacteria, which catalyzes the N-acylation of apolipoproteins, the final step in lipoprotein maturation. This is a reverse amidase (i.e. condensation) reaction. This subgroup belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), this subgroup corresponds to class 9.
Probab=23.12 E-value=2.2e+02 Score=25.88 Aligned_cols=53 Identities=11% Similarity=0.009 Sum_probs=30.7
Q ss_pred HHHHHHHHHHhCC-CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEE
Q psy14484 187 AIFDLEILLKKNH-NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIA 241 (430)
Q Consensus 187 d~~~le~~l~~~~-~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~ 241 (430)
.++.+.+.+++.. ....++++ | =...+|-...+...++++.++|+++++.+|+
T Consensus 24 nl~~~~~~i~~a~~~ga~lvvf-P-E~~l~g~~~~~~~~~~~l~~~ak~~~i~ii~ 77 (270)
T cd07571 24 TLDRYLDLTRELADEKPDLVVW-P-ETALPFDLQRDPDALARLARAARAVGAPLLT 77 (270)
T ss_pred HHHHHHHHHhhcccCCCCEEEe-c-CCcCCcccccCHHHHHHHHHHHHhcCCeEEE
Confidence 4455555555432 22334433 3 2233343333457899999999999998775
No 459
>PLN03244 alpha-amylase; Provisional
Probab=23.06 E-value=1e+02 Score=32.78 Aligned_cols=33 Identities=6% Similarity=-0.033 Sum_probs=28.0
Q ss_pred CChHHHHHHHHHHHhcCCEEEEeccccCCCCcc
Q psy14484 220 YDSIYLKLVREICNNYNIHLIADEIAVGCGRTG 252 (430)
Q Consensus 220 ~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g 252 (430)
-+++.++.+.+.|+++||-+|+|=|+..++..+
T Consensus 438 GTPeDLK~LVD~aH~~GI~VILDvV~NH~~~d~ 470 (872)
T PLN03244 438 GTPDDFKRLVDEAHGLGLLVFLDIVHSYAAADE 470 (872)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEecCccCCCcc
Confidence 346779999999999999999999998776543
No 460
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=22.46 E-value=2e+02 Score=24.06 Aligned_cols=53 Identities=17% Similarity=0.130 Sum_probs=28.1
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcc--cCC----hHHHHHHHHHHHhcCCEEE
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMI--MYD----SIYLKLVREICNNYNIHLI 240 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~--~~~----~~~l~~l~~l~~~~gi~li 240 (430)
.++.+-+.+++...+...+++.| +....... ... ..+-+.+.++|+++++.+|
T Consensus 94 ~l~~li~~i~~~~~~~~iil~t~-~p~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v 152 (188)
T cd01827 94 DYETMIDSFQALPSKPKIYICYP-IPAYYGDGGFINDNIIKKEIQPMIDKIAKKLNLKLI 152 (188)
T ss_pred HHHHHHHHHHHHCCCCeEEEEeC-CcccccCCCccchHHHHHHHHHHHHHHHHHcCCcEE
Confidence 44444444544334556667766 32111101 111 2345678899999998764
No 461
>cd04937 ACT_AKi-DapG-BS_2 ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI. This CD includes the C-terminal of the two ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) strain 168), Clostridia, and Actinobacteria bacterial species. In B. subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive AK isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The BS AKI is tetrameric consisting of two alpha and two beta subunits; th
Probab=22.39 E-value=2.2e+02 Score=18.98 Aligned_cols=45 Identities=11% Similarity=0.258 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHCCcEEeecC-CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 379 FSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 379 ~a~~~~~~l~~~Gv~~~~~~-~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
++.++.+.|.+.|+-+.... ....+ ++...+++.++++++|.+.+
T Consensus 17 i~~~if~aL~~~~I~v~~~~~Se~~i--s~~v~~~~~~~av~~Lh~~f 62 (64)
T cd04937 17 VMAKIVGALSKEGIEILQTADSHTTI--SCLVSEDDVKEAVNALHEAF 62 (64)
T ss_pred HHHHHHHHHHHCCCCEEEEEcCccEE--EEEEcHHHHHHHHHHHHHHh
Confidence 35788999999988775433 22233 45678899999999888765
No 462
>PRK03353 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=22.10 E-value=1.3e+02 Score=26.57 Aligned_cols=35 Identities=14% Similarity=0.195 Sum_probs=26.4
Q ss_pred CeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEE
Q psy14484 201 KIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIA 241 (430)
Q Consensus 201 ~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~ 241 (430)
..++++||- ++ ..|.... ..++.+++++|++.++.
T Consensus 167 ~P~avi~ei-~~-~~G~~~~----~~~~~~fA~~~~l~~v~ 201 (217)
T PRK03353 167 KPAGVLCEL-TN-DDGTMAR----APECIAFAKQHNMPVLT 201 (217)
T ss_pred CceEEEEEe-ec-CCCCccc----HHHHHHHHHHcCCcEEE
Confidence 468888885 54 4465666 88899999999998753
No 463
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=21.96 E-value=1.1e+02 Score=31.22 Aligned_cols=32 Identities=19% Similarity=0.227 Sum_probs=26.4
Q ss_pred ChHHHHHHHHHHHhcCCEEEEeccccCCCCcc
Q psy14484 221 DSIYLKLVREICNNYNIHLIADEIAVGCGRTG 252 (430)
Q Consensus 221 ~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g 252 (430)
+.+.++++.+.|+++|+-+|+|=|+..++..+
T Consensus 158 ~~~e~k~lV~~aH~~Gi~VilD~V~NH~~~~~ 189 (542)
T TIGR02402 158 GPDDLKALVDAAHGLGLGVILDVVYNHFGPEG 189 (542)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCCCCCcc
Confidence 34679999999999999999999987665433
No 464
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=21.94 E-value=5.2e+02 Score=22.28 Aligned_cols=17 Identities=12% Similarity=0.190 Sum_probs=15.0
Q ss_pred HHHHHHHHHhcCCEEEE
Q psy14484 225 LKLVREICNNYNIHLIA 241 (430)
Q Consensus 225 l~~l~~l~~~~gi~li~ 241 (430)
+.++.+.++++|+.+|.
T Consensus 125 v~~a~~~Ak~~G~~vI~ 141 (196)
T PRK10886 125 IVKAVEAAVTRDMTIVA 141 (196)
T ss_pred HHHHHHHHHHCCCEEEE
Confidence 78889999999998884
No 465
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=21.88 E-value=93 Score=22.58 Aligned_cols=23 Identities=22% Similarity=0.244 Sum_probs=19.8
Q ss_pred HHHHHHHHHHhcCCEEEEecccc
Q psy14484 224 YLKLVREICNNYNIHLIADEIAV 246 (430)
Q Consensus 224 ~l~~l~~l~~~~gi~li~DEv~~ 246 (430)
.-++|.++++++|++++-|...+
T Consensus 28 ~A~~I~~~A~e~~VPi~~~~~LA 50 (82)
T TIGR00789 28 VAERIIEIAKKHGIPIVEDPDLV 50 (82)
T ss_pred HHHHHHHHHHHcCCCEEeCHHHH
Confidence 36899999999999999997644
No 466
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=21.68 E-value=1.9e+02 Score=25.60 Aligned_cols=55 Identities=13% Similarity=0.167 Sum_probs=32.3
Q ss_pred HHHHHHHHHHhC--CCCeEEEEEccccccCC-CcccCCh-----HHHHHHHHHHHhcCCEEEEe
Q psy14484 187 AIFDLEILLKKN--HNKIAAIIIEPLVQCAG-GMIMYDS-----IYLKLVREICNNYNIHLIAD 242 (430)
Q Consensus 187 d~~~le~~l~~~--~~~~~~vi~ep~v~~~~-G~~~~~~-----~~l~~l~~l~~~~gi~li~D 242 (430)
++++|+..+... ...+..|++++ ++.-. +....+. .+++.|.++|+++|+.+|+=
T Consensus 107 ~~~~l~~~i~~~~~~~~~~~vvID~-l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~~ 169 (242)
T cd00984 107 TVSDIRSRARRLKKEHGLGLIVIDY-LQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIAL 169 (242)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcC-chhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEEe
Confidence 345554444332 23678899998 66432 1101111 35678889999999977653
No 467
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=21.62 E-value=1.6e+02 Score=28.52 Aligned_cols=46 Identities=13% Similarity=0.298 Sum_probs=30.9
Q ss_pred HHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecc
Q psy14484 188 IFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEI 244 (430)
Q Consensus 188 ~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv 244 (430)
++.++..+ .+..+++++- -.-|...+ .+.+.++||++|+++++|-=
T Consensus 134 l~~~~~~l----~~~~~vVLSD---Y~KG~L~~----~q~~I~~ar~~~~pVLvDPK 179 (467)
T COG2870 134 LEKIKNAL----KSFDALVLSD---YAKGVLTN----VQKMIDLAREAGIPVLVDPK 179 (467)
T ss_pred HHHHHHHh----hcCCEEEEec---cccccchh----HHHHHHHHHHcCCcEEECCC
Confidence 34444444 3456666654 22344554 89999999999999999943
No 468
>PRK06683 hypothetical protein; Provisional
Probab=21.26 E-value=3.3e+02 Score=19.69 Aligned_cols=45 Identities=13% Similarity=0.079 Sum_probs=30.7
Q ss_pred HHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccc
Q psy14484 190 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIA 245 (430)
Q Consensus 190 ~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~ 245 (430)
...+.++ .++..+|++-. ..++...+.+.++|+.++++++.-+..
T Consensus 18 ~v~kaik--~gkaklViiA~---------Da~~~~~~~i~~~~~~~~Vpv~~~~t~ 62 (82)
T PRK06683 18 RTLEAIK--NGIVKEVVIAE---------DADMRLTHVIIRTALQHNIPITKVESV 62 (82)
T ss_pred HHHHHHH--cCCeeEEEEEC---------CCCHHHHHHHHHHHHhcCCCEEEECCH
Confidence 3445555 35777777644 234456899999999999998766543
No 469
>PF13872 AAA_34: P-loop containing NTP hydrolase pore-1
Probab=21.14 E-value=69 Score=29.69 Aligned_cols=24 Identities=17% Similarity=0.324 Sum_probs=20.1
Q ss_pred HHHHHHHHHHH-hcCCEEEEecccc
Q psy14484 223 IYLKLVREICN-NYNIHLIADEIAV 246 (430)
Q Consensus 223 ~~l~~l~~l~~-~~gi~li~DEv~~ 246 (430)
..++.|.+.|. .++.++|+||+|.
T Consensus 159 sRl~ql~~W~g~dfdgvivfDEcH~ 183 (303)
T PF13872_consen 159 SRLDQLVDWCGEDFDGVIVFDECHK 183 (303)
T ss_pred chHHHHHHHHhcCCCceEEeccchh
Confidence 44888899984 5888999999987
No 470
>PRK08745 ribulose-phosphate 3-epimerase; Provisional
Probab=21.04 E-value=5.8e+02 Score=22.52 Aligned_cols=54 Identities=17% Similarity=0.164 Sum_probs=27.5
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcC--CEEEEe
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYN--IHLIAD 242 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g--i~li~D 242 (430)
.++.++..+... +.+-.+.++| ..+--..+....+-++++.++..+++ +.+-+|
T Consensus 122 ~~~~i~~~l~~v-D~VlvMtV~P-Gf~GQ~fi~~~l~KI~~l~~~~~~~~~~~~IeVD 177 (223)
T PRK08745 122 PVDILDWVLPEL-DLVLVMSVNP-GFGGQAFIPSALDKLRAIRKKIDALGKPIRLEID 177 (223)
T ss_pred CHHHHHHHHhhc-CEEEEEEECC-CCCCccccHHHHHHHHHHHHHHHhcCCCeeEEEE
Confidence 456777777542 4566666666 33322222222233445555555554 556666
No 471
>PRK10927 essential cell division protein FtsN; Provisional
Probab=21.03 E-value=4.7e+02 Score=24.47 Aligned_cols=45 Identities=2% Similarity=-0.125 Sum_probs=37.4
Q ss_pred HHHHHHHHHHCCcEEe--ecCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q psy14484 380 SKKFFVAALKNELLLR--PIGNTVYLMPPYILNKNEIQHMTSAIFQT 424 (430)
Q Consensus 380 a~~~~~~l~~~Gv~~~--~~~~~lR~~~~~~~t~e~i~~~~~~l~~~ 424 (430)
|+.+...|...|+-.. ..+.+-|+.+.-+.+.++++...+.|+..
T Consensus 261 AE~LrAkLa~~G~~A~I~~~g~~~RVrVGPf~sr~eAe~a~~rLk~a 307 (319)
T PRK10927 261 AETVRAQLAFEGFDSKITTNNGWNRVVIGPVKGKENADSTLNRLKMA 307 (319)
T ss_pred HHHHHHHHHHcCCeeEEccCCcEEEEEeCCCCCHHHHHHHHHHHHHC
Confidence 6889999999997543 34578899999999999999999999763
No 472
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=20.98 E-value=4e+02 Score=22.48 Aligned_cols=52 Identities=17% Similarity=0.157 Sum_probs=30.1
Q ss_pred HHHHHHHHHHhCCCCeEEEEEcccccc-CC--C--cccCChHHHHHHHHHHHhcCCEEEEe
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQC-AG--G--MIMYDSIYLKLVREICNNYNIHLIAD 242 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~-~~--G--~~~~~~~~l~~l~~l~~~~gi~li~D 242 (430)
++..+-+.+++. ....++++| ... .. + ....-..+-+.+.++|+++|+.+ +|
T Consensus 95 nl~~ii~~~~~~--~~~~il~tp-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-vD 151 (198)
T cd01821 95 YLRRYIAEARAK--GATPILVTP-VTRRTFDEGGKVEDTLGDYPAAMRELAAEEGVPL-ID 151 (198)
T ss_pred HHHHHHHHHHHC--CCeEEEECC-ccccccCCCCcccccchhHHHHHHHHHHHhCCCE-Ee
Confidence 455555555543 345666766 321 11 1 11233466789999999999876 45
No 473
>PRK10949 protease 4; Provisional
Probab=20.84 E-value=1.4e+02 Score=31.06 Aligned_cols=48 Identities=13% Similarity=0.178 Sum_probs=32.2
Q ss_pred HHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEE
Q psy14484 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIA 241 (430)
Q Consensus 189 ~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~ 241 (430)
+.|+++.+ .+++++|++. ++++||....+.+..++|.++ ++.|-++++
T Consensus 354 ~~l~~a~~--D~~vkaVvLr--InSpGGs~~ase~i~~~i~~~-r~~gKPVva 401 (618)
T PRK10949 354 AQIRDARL--DPKVKAIVLR--VNSPGGSVTASEVIRAELAAA-RAAGKPVVV 401 (618)
T ss_pred HHHHHHHh--CCCCcEEEEE--ecCCCCcHHHHHHHHHHHHHH-HhcCCcEEE
Confidence 44444443 4689998886 788899887766655666664 556666665
No 474
>PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B.
Probab=20.79 E-value=1e+02 Score=23.88 Aligned_cols=25 Identities=16% Similarity=0.178 Sum_probs=20.3
Q ss_pred hHHHHHHHHHHHhcCC-EEEEecccc
Q psy14484 222 SIYLKLVREICNNYNI-HLIADEIAV 246 (430)
Q Consensus 222 ~~~l~~l~~l~~~~gi-~li~DEv~~ 246 (430)
.+..+.+.+..++++. ++|+||++.
T Consensus 73 ~~l~~~~~~~l~~~~~~~lviDe~~~ 98 (131)
T PF13401_consen 73 DELRSLLIDALDRRRVVLLVIDEADH 98 (131)
T ss_dssp HHHHHHHHHHHHHCTEEEEEEETTHH
T ss_pred HHHHHHHHHHHHhcCCeEEEEeChHh
Confidence 3456788888888877 999999986
No 475
>cd06068 H2MP_like-1 Putative [NiFe] hydrogenase-specific C-terminal protease. Sequence comparison shows similarity to hydrogenase specific C-terminal endopeptidases, also called Hydrogen Maturation Proteases (H2MP). Maturation of [FeNi] hydrogenases includes formation of the nickel metallocenter, proteolytic processing and assembly with other subunits. Hydrogenase maturation endopeptidases are responsible for the proteolytic processing, liberating a short C-terminal peptide by cleaving after a His or an Arg residue, e.g., HycI (E. coli) is involved in processing of HypE (the large subunit of hydrogenases 3). This cleavage is nickel dependent.
Probab=20.76 E-value=4.5e+02 Score=21.14 Aligned_cols=48 Identities=10% Similarity=0.095 Sum_probs=28.9
Q ss_pred HHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCc
Q psy14484 81 KLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGE 139 (430)
Q Consensus 81 ~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~ 139 (430)
.+++.|.+.. .++.+.+...|+...+.+..... +.+++|+.+...-|.
T Consensus 18 ~v~~~L~~~~--~~~~v~~~d~g~~~~~l~~~~~~---------~~d~viiVDA~~~g~ 65 (144)
T cd06068 18 EVARRLRPRQ--LPPGVRVADFGIRGIHLAYELLD---------GYDTLILVDAVPRGG 65 (144)
T ss_pred HHHHHHhccC--CCCCeEEEECCCCHHHHHHHHHh---------cCCEEEEEEeccCCc
Confidence 5556665543 34457777788887666544433 456777777654443
No 476
>COG0216 PrfA Protein chain release factor A [Translation, ribosomal structure and biogenesis]
Probab=20.72 E-value=7.3e+02 Score=23.53 Aligned_cols=71 Identities=15% Similarity=0.152 Sum_probs=43.4
Q ss_pred eEEEcCCchHHHHHHHHHHHHhhh---hcCCCCCcEEEEEcCCCCC-cchhhhccCCCccchh-hhhccCCCeeEeCC
Q psy14484 96 HCFYGSDGASAVEVALKMSFHYWY---NKGFLNKKKFICLQNSYHG-ETLGALAVTNIQSFKE-IYTSLLNKTYIITT 168 (430)
Q Consensus 96 ~v~~~~sgteA~~~al~~~~~~~~---~~g~~~~~~vl~~~~~yhg-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 168 (430)
+|.-..||.||...|--+++.|.+ .+|+ +-.|+....+-+| +....+.+++...|.. .|..-...+..+|.
T Consensus 117 EIRagtGGdEAalFagDLfrMY~rYAe~kgW--k~ei~s~se~~~GG~kEii~~I~G~gvys~LKfEsGvHRVQRVP~ 192 (363)
T COG0216 117 EIRAGTGGDEAALFAGDLFRMYSRYAESKGW--KVEILSASESELGGYKEIIASISGKGVYSRLKFESGVHRVQRVPA 192 (363)
T ss_pred EEecCCCchHHHHHHHHHHHHHHHHHHhCCC--EEEEeecCcccCCCceEEEEEEeccchhhhhhhccCccceecccc
Confidence 456678999998888777777755 3332 4567777777776 4455566666666533 34433333344443
No 477
>KOG0369|consensus
Probab=20.63 E-value=1.2e+02 Score=31.29 Aligned_cols=28 Identities=21% Similarity=0.322 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHhcCCEEEEeccccCCCC
Q psy14484 223 IYLKLVREICNNYNIHLIADEIAVGCGR 250 (430)
Q Consensus 223 ~~l~~l~~l~~~~gi~li~DEv~~g~g~ 250 (430)
+..++..++|++||.++|+-.+|.|-||
T Consensus 171 tt~~EA~eF~k~yG~PvI~KAAyGGGGR 198 (1176)
T KOG0369|consen 171 TTVEEALEFVKEYGLPVIIKAAYGGGGR 198 (1176)
T ss_pred ccHHHHHHHHHhcCCcEEEeecccCCCc
Confidence 3488999999999999999999987654
No 478
>PRK10264 hydrogenase 1 maturation protease; Provisional
Probab=20.54 E-value=5.6e+02 Score=22.09 Aligned_cols=47 Identities=11% Similarity=0.089 Sum_probs=28.8
Q ss_pred HHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCC
Q psy14484 81 KLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHG 138 (430)
Q Consensus 81 ~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg 138 (430)
.+++.|.+.++ .++.+.+..+|+...+.+-.+. +.+.+|+.+...-|
T Consensus 24 ~va~~L~~~~~-~~~~V~vid~Gt~g~~ll~~i~----------~~d~vIiVDAv~~g 70 (195)
T PRK10264 24 RVAERLYAHYH-WPEYVEIVDGGTQGLNLLGYVE----------SASHLLILDAIDYG 70 (195)
T ss_pred HHHHHHHhhcC-CCCCeEEEECCCCHHHHHHHHc----------CCCEEEEEECCccC
Confidence 55566655542 3456878888888876553322 45677777754444
No 479
>PRK05409 hypothetical protein; Provisional
Probab=20.49 E-value=3.1e+02 Score=25.30 Aligned_cols=34 Identities=21% Similarity=0.380 Sum_probs=29.2
Q ss_pred cccCCCcccCChHHHHHHHHHHHhcCCEEEEecc
Q psy14484 211 VQCAGGMIMYDSIYLKLVREICNNYNIHLIADEI 244 (430)
Q Consensus 211 v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv 244 (430)
..+-||.-.++++++++|.+++++++..++.|..
T Consensus 64 ~LslGs~~~ld~~~L~~l~~l~~~~~~~~vSeHL 97 (281)
T PRK05409 64 SLSLGGAAPLDKDHLKRLKALADRYQPPLVSEHL 97 (281)
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHHCCCEEEeee
Confidence 4455676788999999999999999999999964
No 480
>PF01171 ATP_bind_3: PP-loop family; InterPro: IPR011063 This entry represents the PP-loop motif superfamily [,]. The PP-loop motif appears to be a modified version of the P-loop of nucleotide binding domain that is involved in phosphate binding []. Named PP-motif, since it appears to be a part of a previously uncharacterised ATP pyrophophatase domain. ATP sulfurylases, Escherichia coli NtrL, and Bacillus subtilis OutB consist of this domain alone. In other proteins, the pyrophosphatase domain is associated with amidotransferase domains (type I or type II), a putative citrulline-aspartate ligase domain or a nitrilase/amidase domain.; PDB: 3A2K_A 2E89_B 2E21_D 1WY5_B 1NI5_A.
Probab=20.46 E-value=2.9e+02 Score=23.21 Aligned_cols=41 Identities=24% Similarity=0.330 Sum_probs=27.8
Q ss_pred CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccc
Q psy14484 199 HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIA 245 (430)
Q Consensus 199 ~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~ 245 (430)
+.++.++.+++ |....+.+..+.+.++|+++|+.+++-++.
T Consensus 27 ~~~~~~~~vdh------~~~~~s~~~~~~v~~~~~~~~i~~~~~~~~ 67 (182)
T PF01171_consen 27 GIKLIAVHVDH------GLREESDEEAEFVEEICEQLGIPLYIVRID 67 (182)
T ss_dssp TTEEEEEEEE-------STSCCHHHHHHHHHHHHHHTT-EEEEEE--
T ss_pred CCCeEEEEEec------CCCcccchhHHHHHHHHHhcCCceEEEEee
Confidence 44688888887 333344566889999999999988877653
No 481
>COG0742 N6-adenine-specific methylase [DNA replication, recombination, and repair]
Probab=20.27 E-value=3.7e+02 Score=23.03 Aligned_cols=18 Identities=28% Similarity=0.480 Sum_probs=14.0
Q ss_pred ECCCCEEEecccccccccCC
Q psy14484 30 DVSGKRYLDAISSWWVNLFG 49 (430)
Q Consensus 30 d~~g~~~lD~~~~~~~~~lG 49 (430)
..+|..+||+.+|.| .+|
T Consensus 41 ~i~g~~~LDlFAGSG--aLG 58 (187)
T COG0742 41 EIEGARVLDLFAGSG--ALG 58 (187)
T ss_pred ccCCCEEEEecCCcc--HhH
Confidence 368999999999955 455
No 482
>PF04909 Amidohydro_2: Amidohydrolase; InterPro: IPR006992 These proteins are related to the metal-dependent hydrolase superfamily []. The family includes 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase which converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). ACMS can be converted non-enzymatically to quinolate, a potent endogenous excitoxin of neuronal cells which is implicated in the pathogenesis of various neurodegenerative disorders. In the presence of AMCSD, ACMS is converted to AMS, a benign catabolite. 2-amino-3-(3-oxoprop-2-enyl)-but-2-enedioate = 2-aminomuconate semialdehyde + CO2. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2QPX_A 4D8L_A 3K4W_I 3IRS_B 4DZI_B 3S4T_G 2GWG_B 3IJ6_A 2DVX_C 2DVT_C ....
Probab=20.22 E-value=2.8e+02 Score=24.68 Aligned_cols=51 Identities=18% Similarity=0.221 Sum_probs=33.6
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEe
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIAD 242 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~D 242 (430)
.++++++.+.+ ....+|-+.+ . ..+....++.....+.++|.++|+++++-
T Consensus 86 ~~~~l~~~~~~--~g~~Gv~l~~-~--~~~~~~~~~~~~~~~~~~~~~~~~pv~~H 136 (273)
T PF04909_consen 86 AVEELERALQE--LGFRGVKLHP-D--LGGFDPDDPRLDDPIFEAAEELGLPVLIH 136 (273)
T ss_dssp HHHHHHHHHHT--TTESEEEEES-S--ETTCCTTSGHCHHHHHHHHHHHT-EEEEE
T ss_pred HHHHHHHhccc--cceeeeEecC-C--CCccccccHHHHHHHHHHHHhhccceeee
Confidence 57788888863 4567777666 2 23334444444459999999999988866
No 483
>COG0276 HemH Protoheme ferro-lyase (ferrochelatase) [Coenzyme metabolism]
Probab=20.07 E-value=7.4e+02 Score=23.34 Aligned_cols=40 Identities=13% Similarity=0.160 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHh
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNN 234 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~ 234 (430)
..+.+++++.+.+..+..-.+.+ ....+.|++.+.+..++
T Consensus 136 ~~~~~~~al~~~~~~~~i~~I~~--------~~~~p~yI~a~a~~I~~ 175 (320)
T COG0276 136 YVDELARALKELRGQPKISTIPD--------YYDEPLYIEALADSIRE 175 (320)
T ss_pred HHHHHHHHHHhcCCCCceEEecC--------ccCChHHHHHHHHHHHH
Confidence 56777788876654556666666 44455667766665554
No 484
>cd08071 MPN_DUF2466 Mov34/MPN/PAD-1 family. Mov34 DUF2466 (also known as DNA repair protein RadC) domain of unknown function contains the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity. However, to date, the name RadC has been misleading and no function has been determined.
Probab=20.06 E-value=3.5e+02 Score=20.85 Aligned_cols=50 Identities=22% Similarity=0.157 Sum_probs=30.6
Q ss_pred HHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHH---HHHHHHHHhcCCEEEEecc
Q psy14484 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYL---KLVREICNNYNIHLIADEI 244 (430)
Q Consensus 189 ~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l---~~l~~l~~~~gi~li~DEv 244 (430)
+-++.++.. +....+++ .|.+.|...|+.+-+ ++|.+.|+--|+.| +|-+
T Consensus 50 ~i~~~aL~~--~A~~vil~---HNHPsG~~~PS~~D~~~T~~l~~~~~~l~i~l-lDHi 102 (113)
T cd08071 50 EIFKEALRH--NAAAIILA---HNHPSGDPTPSREDIELTKRLKEAGELLGIRL-LDHI 102 (113)
T ss_pred HHHHHHHHH--hhheEEEE---eeCCCCCCCCCHHHHHHHHHHHHHHHHCCCEE-eeEE
Confidence 456677763 22333333 456667788887655 57788888888764 3543
Done!